BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012120
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 144/306 (47%), Gaps = 31/306 (10%)
Query: 12 EEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRF 71
EE P V ++ +S+ L+ A+ F+ +NI+ G VYKG+L + +AVKR
Sbjct: 15 EEDPEV-HLGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRL 70
Query: 72 NRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW- 129
QF E + +R L L G C ERLLV YM N ++A L
Sbjct: 71 KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 130
Query: 130 ETQP-MKWAMRLRVALHIAEALEY----CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184
E+QP + W R R+AL A L Y C K ++ D+ A I+ D++ + FGL
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 185 MK--NSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 239
K + +D + + PEYL TG+ + ++ ++ +G +LL+L++G+ L
Sbjct: 189 AKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
Query: 240 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
L++++ ++ L D L+G + +E +L+++A C Q P ERP
Sbjct: 249 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Query: 287 SLVTAL 292
+V L
Sbjct: 309 EVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 12 EEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRF 71
EE P V ++ +S+ L+ A+ F +NI+ G VYKG+L + +AVKR
Sbjct: 7 EEDPEV-HLGQLKRFSLRELQVASDNFXNKNIL---GRGGFGKVYKGRLADGXLVAVKRL 62
Query: 72 NRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW- 129
QF E + +R L L G C ERLLV YM N ++A L
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 130 ETQP-MKWAMRLRVALHIAEALEY----CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184
E+QP + W R R+AL A L Y C K ++ D+ A I+ D++ + FGL
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 185 MK--NSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 239
K + +D + + PEYL TG+ + ++ ++ +G +LL+L++G+ L
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 240 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
L++++ ++ L D L+G + +E +L+++A C Q P ERP
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 287 SLVTAL 292
+V L
Sbjct: 301 EVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 23 FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 78
F +S L+ T+ F I ++ GE VVYKG + N +AVK+ +A D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 68
Query: 79 -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 132
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 133 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190
P+ W MR ++A A + + + ++ D+ + I+ D+ ++S FGL + S
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 191 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 239
R T A+ PE LR G +TP+S +YSFG +LL++++G +H P L
Sbjct: 188 QTVMXSRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 240 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
D I D+ + + +E +S +AS+CL + +RP+ +
Sbjct: 246 IKEEIEDEEKTIEDYI-DKKMNDADSTSVEAMYS---------VASQCLHEKKNKRPDIK 295
Query: 287 SL 288
+
Sbjct: 296 KV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 23 FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 78
F +S L+ T+ F I ++ GE VVYKG + N +AVK+ +A D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 68
Query: 79 -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 132
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 133 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190
P+ W MR ++A A + + + ++ D+ + I+ D+ ++S FGL + S
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 191 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 239
R T A+ PE LR G +TP+S +YSFG +LL++++G +H P L
Sbjct: 188 QTVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 240 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
D I D+ + + +E +S +AS+CL + +RP+ +
Sbjct: 246 IKEEIEDEEKTIEDYI-DKKMNDADSTSVEAMYS---------VASQCLHEKKNKRPDIK 295
Query: 287 SL 288
+
Sbjct: 296 KV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 52/302 (17%)
Query: 23 FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 78
F +S L+ T+ F I ++ GE VVYKG + N +AVK+ +A D
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 62
Query: 79 -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 132
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 133 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190
P+ W MR ++A A + + + ++ D+ + I+ D+ ++S FGL + S
Sbjct: 123 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 191 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 239
R T A+ PE LR G +TP+S +YSFG +LL++++G +H P L
Sbjct: 182 QXVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 239
Query: 240 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
D I D+ + + +E +S +AS+CL + +RP+ +
Sbjct: 240 IKEEIEDEEKTIEDYI-DKKMNDADSTSVEAMYS---------VASQCLHEKKNKRPDIK 289
Query: 287 SL 288
+
Sbjct: 290 KV 291
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 14/210 (6%)
Query: 31 LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVG 90
L AT+ F + ++ G VYKG L + ++A+KR + +F E +
Sbjct: 34 LEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 91 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAE 148
R+ L +L+G C E +E +L+ +YM N L +HL+ + T M W RL + + A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 149 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSY-----STNLAFT 201
L Y + RA+ H D+ + I+ D++ P+++ FG+ K + G+++ L +
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PEY GR+T +S +YSFG +L ++L +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 31 LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVG 90
L AT+ F + ++ G VYKG L + ++A+KR + +F E +
Sbjct: 34 LEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 91 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAE 148
R+ L +L+G C E +E +L+ +YM N L +HL+ + T M W RL + + A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 149 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFT 201
L Y + RA+ H D+ + I+ D++ P+++ FG+ K + L +
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PEY GR+T +S +YSFG +L ++L +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 52/302 (17%)
Query: 23 FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 78
F +S L+ T+ F I ++ GE VVYKG + N +AVK+ +A D
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 59
Query: 79 -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 132
+QF +E + + ++ L LLG +GD+ LV Y PN +L L + T
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 133 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190
P+ W R ++A A + + + ++ D+ + I+ D+ ++S FGL + S
Sbjct: 120 PLSWHXRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 191 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSHAL- 239
R T A+ PE LR G +TP+S +YSFG +LL++++G +H P L
Sbjct: 179 QXVXXSRIVGTT-AYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 236
Query: 240 -------------DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
D I D+ + +E +S +AS+CL + +RP+ +
Sbjct: 237 IKEEIEDEEKTIEDYI-DKKXNDADSTSVEAXYS---------VASQCLHEKKNKRPDIK 286
Query: 287 SL 288
+
Sbjct: 287 KV 288
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 125
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVT 212
L+ DL A + +D ++S FGL + D S+ + ++PPE L + +
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 213 PESVMYSFGTLLLDLLSGKHIP 234
+S +++FG L+ ++ S +P
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 140
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVT 212
L+ DL A + +D ++S FGL + D S+ + ++PPE L + +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 213 PESVMYSFGTLLLDLLSGKHIP 234
+S +++FG L+ ++ S +P
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 69
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 124
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 211
L+ DL A + +D ++S FGL + D Y++++ ++PPE L +
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 212 TPESVMYSFGTLLLDLLSGKHIP 234
+ +S +++FG L+ ++ S +P
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 76
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 131
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 211
L+ DL A + +D ++S FGL + D Y++++ ++PPE L +
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 212 TPESVMYSFGTLLLDLLSGKHIP 234
+ +S +++FG L+ ++ S +P
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 140
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 211
L+ DL A + +D ++S FGL + D Y++++ ++PPE L +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 212 TPESVMYSFGTLLLDLLSGKHIP 234
+ +S +++FG L+ ++ S +P
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 125
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 211
L+ DL A + +D ++S FGL + D Y++++ ++PPE L +
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 212 TPESVMYSFGTLLLDLLSGKHIP 234
+ +S +++FG L+ ++ S +P
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+ E G VV GK Q+ +A+K + + +F+EEA+ + L + +L L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 65
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + ++ EYM N L +L ++TQ + L + + EA+EY SK+
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 120
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 211
L+ DL A + +D ++S FGL + D Y++++ ++PPE L +
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 212 TPESVMYSFGTLLLDLLSGKHIP 234
+ +S +++FG L+ ++ S +P
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 40/287 (13%)
Query: 43 IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 95
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 147
+ LLG +G L+V E M + L +L + P +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 148 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 201
+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 256
PE L+ G T S M+SFG +L ++ S P L + D D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
T+L+R+ C Q+ P+ RP +V L KD PS
Sbjct: 260 ------RVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPS 293
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 40/287 (13%)
Query: 43 IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 95
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 147
+ LLG +G L+V E M + L +L + P +++A IA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 148 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 201
+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 138 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 256
PE L+ G T S M+SFG +L ++ S P L + D D+C E
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 256
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
T+L+R+ C Q+ P+ RP +V L KD PS
Sbjct: 257 ------RVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPS 290
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 40/287 (13%)
Query: 43 IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 95
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 147
+ LLG +G L+V E M + L +L + P +++A IA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 148 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 201
+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 140 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 256
PE L+ G T S M+SFG +L ++ S P L + D D+C E
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 258
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
T+L+R+ C Q+ P+ RP +V L KD PS
Sbjct: 259 ------RVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPS 292
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 42 NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 94
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 95 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 146
+ LLG +G L+V E M + L +L + P +++A I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 147 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 200
A+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCL 255
PE L+ G T S M+SFG +L ++ S P L + D D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
E T+L+R+ C Q+ P+ RP +V L KD PS
Sbjct: 259 E------RVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPS 293
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 42 NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 94
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 95 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 146
+ LLG +G L+V E M + L +L + P +++A I
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 147 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 200
A+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCL 255
PE L+ G T S M+SFG +L ++ S P L + D D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
E T+L+R+ C Q+ P+ RP +V L KD PS
Sbjct: 259 E------RVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPS 293
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 43 IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 95
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 147
+ LLG +G L+V E M + L +L + P +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 148 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 201
+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 256
PE L+ G T S M+SFG +L ++ S P L + D D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
T+L+R+ C Q+ P RP +V L KD PS
Sbjct: 260 ------RVTDLMRM---CWQFNPNMRPT----FLEIVNLLKDDLHPS 293
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
+V G V+ G ++AVK + S PDA FL EA + QL+++RL L
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL 73
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 160
+ + ++ EYM N +L L + L +A IAE + + +ER
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 161 YH-DLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVT 212
H DL A I+ D ++ +++ FGL + +R+G + + +T PE + G T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFT 188
Query: 213 PESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266
+S ++SFG LL ++++ IP P +L R + D+C E E
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------E 238
Query: 267 LVRLASRCLQYEPRERPN 284
L +L C + P +RP
Sbjct: 239 LYQLMRLCWKERPEDRPT 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 37 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 93
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 94 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 151
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 209
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 210 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 259
Query: 280 RERPN 284
+RP
Sbjct: 260 EDRPT 264
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 39 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 95
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 96 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 153
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 211
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 212 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 261
Query: 280 RERPNPRSLVTALVTLQKDTE 300
+RP L + L TE
Sbjct: 262 EDRPTFDYLRSVLEDFFTATE 282
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 92 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 149
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 257
Query: 280 RERPN 284
+RP
Sbjct: 258 EDRPT 262
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 43 IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 95
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 147
+ LLG +G L+V E M + L +L + P +++A IA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 148 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 201
+ + Y +K + ++ +L A + D ++ FG+ ++ R G + +
Sbjct: 142 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 256
PE L+ G T S M+SFG +L ++ S P L + D D+C E
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
T+L+R+ C Q+ P RP +V L KD PS
Sbjct: 261 ------RVTDLMRM---CWQFNPNMRPT----FLEIVNLLKDDLHPS 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 38 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 94
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 95 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 152
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 210
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 211 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 260
Query: 280 RERPNPRSLVTALVTLQKDTE 300
+RP L + L TE
Sbjct: 261 EDRPTFDYLRSVLEDFFTATE 281
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 123
++AVK A A+ FL EA + QLR+ L LLG E L +V EYM +L
Sbjct: 46 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + L+ +L + EA+EY ++ DL A ++ +D ++S FG
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 184 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
L K + + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 163 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 32/253 (12%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 24 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 80
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 81 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 138
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 196
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 197 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 246
Query: 280 RERPNPRSLVTAL 292
+RP L + L
Sbjct: 247 EDRPTFDYLRSVL 259
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 40/287 (13%)
Query: 43 IVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNR 95
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIA 147
+ LLG +G L+V E M + L +L + P +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 148 EALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFT 201
+ + Y +K + ++ +L A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLE 256
PE L+ G T S M+SFG +L ++ S P L + D D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
T+L+R+ C Q+ P RP +V L KD PS
Sbjct: 260 ------RVTDLMRM---CWQFNPNMRPT----FLEIVNLLKDDLHPS 293
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 251
Query: 280 RERPNPRSLVTALVTLQKDTE 300
+RP L + L TE
Sbjct: 252 EDRPTFDYLRSVLEDFFTATE 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 34 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 91 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 148
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 206
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 207 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 256
Query: 280 RERPNPRSLVTALVTLQKDTE 300
+RP L + L TE
Sbjct: 257 EDRPTFDYLRSVLEDFFTATE 277
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 123
++AVK A A+ FL EA + QLR+ L LLG E L +V EYM +L
Sbjct: 218 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + L+ +L + EA+EY ++ DL A ++ +D ++S FG
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFG 334
Query: 184 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
L K + + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 335 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 123
++AVK A A+ FL EA + QLR+ L LLG E L +V EYM +L
Sbjct: 31 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + L+ +L + EA+EY ++ DL A ++ +D ++S FG
Sbjct: 89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFG 147
Query: 184 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
L K + + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 148 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 92 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 149
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 257
Query: 280 RERPN 284
+RP
Sbjct: 258 EDRPT 262
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 251
Query: 280 RERPN 284
+RP
Sbjct: 252 EDRPT 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 30 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 86
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 87 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 144
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 202
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 203 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 252
Query: 280 RERPN 284
+RP
Sbjct: 253 EDRPT 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 31 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 88 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 145
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 203
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 204 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 253
Query: 280 RERPN 284
+RP
Sbjct: 254 EDRPT 258
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 115/253 (45%), Gaps = 32/253 (12%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H DL A I+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 251
Query: 280 RERPNPRSLVTAL 292
+RP L + L
Sbjct: 252 EDRPTFDYLRSVL 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 123
++AVK A A+ FL EA + QLR+ L LLG E L +V EYM +L
Sbjct: 37 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + L+ +L + EA+EY ++ DL A ++ +D ++S FG
Sbjct: 95 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFG 153
Query: 184 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
L K + + + +T PE LR + +S ++SFG LL ++ S +P
Sbjct: 154 LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 265 ------ELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + S PDA FL EA + QL+++RL L + + ++
Sbjct: 25 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 81
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N +L L + L +A IAE + + +ER H +L A I+
Sbjct: 82 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRNLRAANILVS 139
Query: 173 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 225
D ++ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 197
Query: 226 DLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ IP P +L R + D+C E EL +L C + P
Sbjct: 198 EIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPE---------ELYQLMRLCWKERP 247
Query: 280 RERPN 284
+RP
Sbjct: 248 EDRPT 252
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 257
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 258 ------ELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 143 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 261
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 262 ------ELMRM---CWQYNPKMRPSFLEIISSI 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 264 ------ELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 265 ------ELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 264 ------ELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 137 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 250
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
D EL+R+ C QY P+ RP+ +++++
Sbjct: 251 -PDMLLELMRM---CWQYNPKMRPSFLEIISSI 279
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 271 ------ELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 174 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 292
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 293 ------ELMRM---CWQYNPKMRPSFLEIISSI 316
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L P + +++A IA+ +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 142 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 260
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 261 ------ELMRM---CWQYNPKMRPSFLEIISSI 284
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 119/263 (45%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +++ + + +T PE L + + +S +++FG LL ++
Sbjct: 145 NHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 228 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P PS +L+ + C E + EL+R C Q+ P +R
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 254
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 255 PSFAEIHQAFETMFQESSISDEV 277
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L P + +++A IA+ +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 271 ------ELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L + P + +++A IA+ +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A +D ++ FG+ ++ R G + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 252
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
D EL+R+ C QY P+ RP+ +++++
Sbjct: 253 -PDMLLELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 26/264 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ +++ FGL + + G + + +T PE L + + +S +++FG LL +
Sbjct: 145 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 227 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+ + P PS +L+ + C E + EL+R C Q+ P +
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSD 253
Query: 282 RPNPRSLVTALVTLQKDTEVPSHV 305
RP+ + A T+ +++ + V
Sbjct: 254 RPSFAEIHQAFETMFQESSISDEV 277
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 18/253 (7%)
Query: 55 VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
V+ G+L + +AVK + PD + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
V E + L E ++ L++ A +EY SK ++ DL A +
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVT 247
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ ++S FG+ + DG ++ + +T PE L GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 227 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPN 284
S P + N QT G+ E + RL +C YEP +RP+
Sbjct: 308 TFSLGASPYPNL------SNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 285 PRSLVTALVTLQK 297
++ L +++K
Sbjct: 362 FSTIYQELQSIRK 374
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 261
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 262 PSFAEIHQAFETMFQESSISDEV 284
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 86 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ +++ FGL + + G + + +T PE L + + +S +++FG LL +
Sbjct: 145 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 227 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+ + P PS +L+ + C E + EL+R C Q+ P +
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSD 253
Query: 282 RPNPRSLVTALVTLQKDTEV 301
RP+ + A T+ +++ +
Sbjct: 254 RPSFAEIHQAFETMFQESSI 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 261
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 262 PSFAEIHQAFETMFQESSISDEV 284
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 256
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 257 PSFAEIHQAFETMFQESSISDEV 279
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 22/262 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 208 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 284 NPRSLVTALVTLQKDTEVPSHV 305
+ + A T+ +++ + V
Sbjct: 260 SFAEIHQAFETMFQESSISDEV 281
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 22/262 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 42 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 100
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 101 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 159
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 160 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 219 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 270
Query: 284 NPRSLVTALVTLQKDTEVPSHV 305
+ + A T+ +++ + V
Sbjct: 271 SFAEIHQAFETMFQESSISDEV 292
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 22/262 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 208 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 284 NPRSLVTALVTLQKDTEVPSHV 305
+ + A T+ +++ + V
Sbjct: 260 SFAEIHQAFETMFQESSISDEV 281
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 18/253 (7%)
Query: 55 VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
V+ G+L + +AVK + PD + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
V E + L E ++ L++ A +EY SK ++ DL A +
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVT 247
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ ++S FG+ + DG ++ + +T PE L GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 227 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPN 284
S P + N QT G+ E + RL +C YEP +RP+
Sbjct: 308 TFSLGASPYPNL------SNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS 361
Query: 285 PRSLVTALVTLQK 297
++ L +++K
Sbjct: 362 FSTIYQELQSIRK 374
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 256
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 257 PSFAEIHQAFETMFQESSISDEV 279
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 256
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 257 PSFAEIHQAFETMFQESSISDEV 279
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 22/262 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 284 NPRSLVTALVTLQKDTEVPSHV 305
+ + A T+ +++ + V
Sbjct: 258 SFAEIHQAFETMFQESSISDEV 279
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 174 DVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + +T PE L + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 258
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 259 PSFAEIHQAFETMFQESSISDEV 281
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 89 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 147
Query: 174 DVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + +T PE L + + +S +++FG LL ++
Sbjct: 148 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDR 257
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 258 PSFAEIHQAFETMFQESSISDEV 280
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 398
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 456
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + EP E
Sbjct: 457 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 507
Query: 282 RPN 284
RP
Sbjct: 508 RPT 510
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 159
G C E LV E+M + L+ +L TQ +A L + L + E + Y +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEASV 124
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 214
++ DL A + ++ ++S FG+ + D + S+ + + PE R + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG L+ ++ S IP
Sbjct: 185 SDVWSFGVLMWEVFSEGKIP 204
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 79 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 138
+ F E A + +L ++ L G C GDE +LV E++ +L +L +
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILW 114
Query: 139 RLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST- 196
+L VA +A A+ + +E L H ++ A I+ + + + +K S G S +
Sbjct: 115 KLEVAKQLAAAMHFL--EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 197 -------NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
+ + PPE + + + + +SFGT L ++ SG P S ALD R +Q
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQ 229
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVP 302
D Q + + EL L + C+ YEP RP+ R+++ L +L VP
Sbjct: 230 FYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 257 GEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 315
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + EP E
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 282 RPN 284
RP
Sbjct: 425 RPT 427
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 16/236 (6%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G ++A+K + FLEEA+ + +L++ +L L E + +V
Sbjct: 25 VWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVT 82
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
EYM +L L E + +K + +A +A + Y + ++ DL + I+ +
Sbjct: 83 EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMNYIHRDLRSANILVGNG 141
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 142 LICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
++ +P + +R + + D L L C + +P ERP
Sbjct: 200 VTKGRVPYPG----MNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERP 251
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 69
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 159
G C E LV E+M + L+ +L TQ +A L + L + E + Y +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 125
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 214
++ DL A + ++ ++S FG+ + D + S+ + + PE R + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG L+ ++ S IP
Sbjct: 186 SDVWSFGVLMWEVFSEGKIP 205
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 24 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIV 80
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 81 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 139
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 140 NLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 197
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + EP E
Sbjct: 198 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 248
Query: 282 RPN 284
RP
Sbjct: 249 RPT 251
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 27 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 83
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 84 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 142
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 143 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 200
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + EP E
Sbjct: 201 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 251
Query: 282 RPN 284
RP
Sbjct: 252 RPT 254
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 315
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 227 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P LD + C E L L +C + EP E
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 282 RPN 284
RP
Sbjct: 425 RPT 427
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 315
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 227 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P LD + C E L L +C + EP E
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 282 RPN 284
RP
Sbjct: 425 RPT 427
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 33 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 92 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 150
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 151 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 210 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 261
Query: 284 NPRSLVTALVTLQKDT 299
+ + A T+ +++
Sbjct: 262 SFAEIHQAFETMFQES 277
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 159
G C E LV E+M + L+ +L TQ +A L + L + E + Y +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 124
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 214
++ DL A + ++ ++S FG+ + D + S+ + + PE R + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG L+ ++ S IP
Sbjct: 185 SDVWSFGVLMWEVFSEGKIP 204
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGT--ELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 206 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 284 NPRSLVTALVTLQKDT 299
+ + A T+ +++
Sbjct: 258 SFAEIHQAFETMFQES 273
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 66
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 159
G C E LV E+M + L+ +L TQ +A L + L + E + Y +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 122
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 214
++ DL A + ++ ++S FG+ + D + S+ + + PE R + +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG L+ ++ S IP
Sbjct: 183 SDVWSFGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 71
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 159
G C E LV E+M + L+ +L TQ +A L + L + E + Y +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 127
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 214
++ DL A + ++ ++S FG+ + D + S+ + + PE R + +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG L+ ++ S IP
Sbjct: 188 SDVWSFGVLMWEVFSEGKIP 207
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 79 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 138
+ F E A + +L ++ L G C GDE +LV E++ +L +L +
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK-NKNCINILW 114
Query: 139 RLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST- 196
+L VA +A A+ + +E L H ++ A I+ + + + +K S G S +
Sbjct: 115 KLEVAKQLAWAMHFL--EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 197 -------NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
+ + PPE + + + + +SFGT L ++ SG P S ALD R +Q
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQ 229
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVP 302
D Q + + EL L + C+ YEP RP+ R+++ L +L VP
Sbjct: 230 FYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 211 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 284 NPRSLVTALVTL 295
+ + A T+
Sbjct: 263 SFAEIHQAFETM 274
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 28/266 (10%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
+++ +AVK ++ + F EA + L++ + G C EGD ++V EYM +
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 121 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
L K L E P + + L +A IA + Y S + ++ DL
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 159
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTL 223
+ +++ ++ FG+ ++ Y + + PPE + + T ES ++S G +
Sbjct: 160 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 224 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT---ELVRLASRCLQYEPR 280
L ++ + P L + I+ +T +G+ T E+ L C Q EP
Sbjct: 220 LWEIFTYGKQP---WYQLSNNEVIECIT----QGRVLQRPRTCPQEVYELMLGCWQREPH 272
Query: 281 ERPNPRSLVTALVTLQKDTEVPSHVL 306
R N + + T L L K + V +L
Sbjct: 273 MRKNIKGIHTLLQNLAKASPVYLDIL 298
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 22/256 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY G + +AVK + +FL+EA + ++++ L LLG C +V
Sbjct: 48 VYVGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYMP L +L + + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 107 TEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 165
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + +S +++FG LL ++
Sbjct: 166 NHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGT--ELVRLASRCLQYEPRERP 283
+ + P +DL + ++ LE + + EG ++ L C ++ P +RP
Sbjct: 225 AT-YGMSPYPGIDLSQVYDL-------LEKGYRMEQPEGCPPKVYELMRACWKWSPADRP 276
Query: 284 NPRSLVTALVTLQKDT 299
+ A T+ D+
Sbjct: 277 SFAETHQAFETMFHDS 292
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ +L A + +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 353
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 354 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMRA---CWQWNPSDR 463
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 464 PSFAEIHQAFETMFQESSISDEV 486
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL +
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE- 204
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGT--ELVRLASRCLQYEPRERP 283
++ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 205 IATYGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 284 NPRSLVTALVTL 295
+ + A T+
Sbjct: 258 SFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 26/264 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 89 IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 147
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ +++ FGL + + G + + +T PE L + + +S +++FG LL +
Sbjct: 148 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 227 LLSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+ + P S +L+ + C E + EL+R C Q+ P +
Sbjct: 206 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSD 256
Query: 282 RPNPRSLVTALVTLQKDTEVPSHV 305
RP+ + A T+ +++ + V
Sbjct: 257 RPSFAEIHQAFETMFQESSISDEV 280
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 93 IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGT--ELVRLASRCLQYEPRERP 283
+ + P +DL + + LE + + EG ++ L C Q+ P +RP
Sbjct: 211 AT-YGMSPYPGIDLSQVYEL-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 284 NPRSLVTALVTL 295
+ + A T+
Sbjct: 263 SFAEIHQAFETM 274
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 233 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 291
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ +L A + +
Sbjct: 292 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 350
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 351 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 410 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMRA---CWQWNPSDR 460
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 461 PSFAEIHQAFETMFQESSISDEV 483
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ +L A + +
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 392
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + G +Y+ + + +T PE L + + +S +++FG LL ++
Sbjct: 393 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 228 LSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E + EL+R C Q+ P +R
Sbjct: 452 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMRA---CWQWNPSDR 502
Query: 283 PNPRSLVTALVTLQKDTEVPSHV 305
P+ + A T+ +++ + V
Sbjct: 503 PSFAEIHQAFETMFQESSISDEV 525
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 31 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + ++ IA + Y + ++ DL A I+ +
Sbjct: 88 TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGE 146
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 147 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + EP E
Sbjct: 205 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 255
Query: 282 RPN 284
RP
Sbjct: 256 RPT 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 31 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 87
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + ++ IA + Y + ++ DL A I+ +
Sbjct: 88 TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGE 146
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 147 NLVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + EP E
Sbjct: 205 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 255
Query: 282 RPN 284
RP
Sbjct: 256 RPT 258
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 CEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLAAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 23 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 79
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 80 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 138
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 139 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 196
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 197 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 247
Query: 282 RPN 284
RP
Sbjct: 248 RPT 250
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 18/264 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
++ E G VV GK + Q+ +AVK + + +F +EA+ + +L + +L
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFY 69
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
G C + +V EY+ N L +L + ++ + L + + E + + S + ++
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLES-HQFIH 127
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESV 216
DL A + D D+ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 217 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS---CLEGQFSSDEGTELVRLASR 273
+++FG L+ ++ S +P DL + + +SD + ++
Sbjct: 188 VWAFGILMWEVFSLGKMP----YDLYTNSEVVLKVSQGHRLYRPHLASD---TIYQIMYS 240
Query: 274 CLQYEPRERPNPRSLVTALVTLQK 297
C P +RP + L++++ L++
Sbjct: 241 CWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 25 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 81
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 82 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 140
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 141 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 199 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 249
Query: 282 RPN 284
RP
Sbjct: 250 RPT 252
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
V E G +V+ G N+ ++A+K + + F+EEA + +L + +L L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLY 88
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 159
G C E LV E+M + L+ +L TQ +A L + L + E + Y +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 144
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 214
++ DL A + ++ ++S FG+ + D + S+ + + PE R + +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG L+ ++ S IP
Sbjct: 205 SDVWSFGVLMWEVFSEGKIP 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + ++R+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 TEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G N ++AVK + + FLEEA + L++ +L L + ++
Sbjct: 29 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
EYM +L L E + + + IAE + Y K ++ DL A ++ +
Sbjct: 88 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 146
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 228 LSGKHIP 234
++ IP
Sbjct: 205 VTYGKIP 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
+V + G V+ G N ++AVK + + FLEEA + L++ +L L
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
+ + ++ E+M +L L E + + + IAE + Y K ++
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 132
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPE 214
DL A ++ + + +++ FGL + +R+G + + +T PE + G T +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIK 190
Query: 215 SVMYSFGTLLLDLLSGKHIP 234
S ++SFG LL ++++ IP
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 26/258 (10%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M L +L Q + + L +A I+ A+EY K+ ++ DL A + +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ +++ FGL + + G + + +T PE L + + +S +++FG LL +
Sbjct: 152 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 227 LLSGKHIPP-----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+ + P S +L+ + C E + EL+R C Q+ P +
Sbjct: 210 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSD 260
Query: 282 RPNPRSLVTALVTLQKDT 299
RP+ + A T+ +++
Sbjct: 261 RPSFAEIHQAFETMFQES 278
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 91 MEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 227 LLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
L + +P P LD + C E L L +C + +P E
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 282 RPN 284
RP
Sbjct: 259 RPT 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 32/245 (13%)
Query: 55 VYKGKLENQFRIAVKRF---NRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
V+ G R+A+K N S P+A FL+EA+ + +LR+ +L L E +
Sbjct: 201 VWMGTWNGTTRVAIKTLKPGNMS--PEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 255
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
+V EYM +L L + ++ + +A IA + Y + ++ DL A I+
Sbjct: 256 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILV 314
Query: 172 DDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 224
+++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL
Sbjct: 315 GENLVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILL 372
Query: 225 LDLLSGKHIP-PS----HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
+L + +P P LD + C E L L +C + +P
Sbjct: 373 TELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKDP 423
Query: 280 RERPN 284
ERP
Sbjct: 424 EERPT 428
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 124 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 181
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 242 GVLLWELMT-RGAPP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 224 GVLLWELMT-RGAPP 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 104 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 161
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG------QFSSDEGTELVRLASRC 274
G LL +L++ + PP D N +T L+G ++ D L + +C
Sbjct: 222 GVLLWELMT-RGAPP------YPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKC 271
Query: 275 LQYEPRERPNPRSLVTAL 292
+ RP+ LV+ +
Sbjct: 272 WHPKAEMRPSFSELVSRI 289
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 103 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 160
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 221 GVLLWELMT-RGAPP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 101 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 158
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG------QFSSDEGTELVRLASRC 274
G LL +L++ + PP D N +T L+G ++ D L + +C
Sbjct: 219 GVLLWELMT-RGAPP------YPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKC 268
Query: 275 LQYEPRERPNPRSLVTAL 292
+ RP+ LV+ +
Sbjct: 269 WHPKAEMRPSFSELVSRI 286
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 125 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 182
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 243 GVLLWELMT-RGAPP 256
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 224 GVLLWELMT-RGAPP 237
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 105 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 162
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 223 GVLLWELMT-RGAPP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 55 VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 108
VY G L + + AVK NR + + QFL E + + + +LLG C +
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
L+V YM + L ++ ET + L +A+ ++Y SK + ++ DL A
Sbjct: 98 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 155
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 220
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 221 GTLLLDLLSGKHIPP 235
G LL +L++ + PP
Sbjct: 216 GVLLWELMT-RGAPP 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 27/260 (10%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
+++ +AVK + F EA + L++ + G C +GD ++V EYM +
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 121 TLAKHL--------FHWETQP------MKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L K L + QP + + L +A IA + Y S + ++ DL
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 161
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 220
+ ++ ++ FG+ ++ Y + + PPE + + T ES ++SF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-CLEGQFSSDEGTELVRLASRCLQYEP 279
G +L ++ + P L I+ +T LE + V L C Q EP
Sbjct: 222 GVILWEIFTYGKQP---WFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLG--CWQREP 276
Query: 280 RERPNPRSLVTALVTLQKDT 299
++R N + + L L K T
Sbjct: 277 QQRLNIKEIYKILHALGKAT 296
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 22/257 (8%)
Query: 48 GEKAPNVVYKGKL----ENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLG 102
G+ VVY G+ +N+ + A+K +R + FL E + L + + L+G
Sbjct: 30 GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 103 CCC--EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 160
EG +L+ YM + L + + + P + + L +A +EY ++++ +
Sbjct: 90 IMLPPEGLPHVLLP-YMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYL-AEQKFV 146
Query: 161 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVT 212
+ DL A + D+ +++ FGL ++ D YS + +T E L+T R T
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 213 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
+S ++SFG LL +LL+ + PP +D + + ++ D L ++
Sbjct: 207 TKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---SLYQVMQ 262
Query: 273 RCLQYEPRERPNPRSLV 289
+C + +P RP R LV
Sbjct: 263 QCWEADPAVRPTFRVLV 279
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 44/253 (17%)
Query: 66 IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+AVK A D + F EA + + N + LLG C G L+ EYM L +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 125 HLFHWETQ----------------------PMKWAMRLRVALHIAEALEYCTSKERALYH 162
L P+ A +L +A +A + Y S+ + ++
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY-LSERKFVHR 198
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 216
DL + +++ +++ FGL +N Y + + + PPE + R T ES
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258
Query: 217 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++++G +L ++ S P + +RD NI ++C EL L
Sbjct: 259 VWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC---------PLELYNLM 309
Query: 272 SRCLQYEPRERPN 284
C P +RP+
Sbjct: 310 RLCWSKLPADRPS 322
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 24/252 (9%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 122
+AVK P R + +E + L + + GCC + E+ LV EY+P +L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L + A L A I E + Y S + ++ +L A ++ D+D ++ F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHS-QHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 183 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 232
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 233 IPPSHALDLI----RDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 285
PP+ L+LI + LT+ G+ E+ L C + E RP
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 286 RSLVTALVTLQK 297
+L+ L T+ +
Sbjct: 282 ENLIPILKTVHE 293
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 66 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 122
+AVK +A P + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 123 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
+ L H + + + + A I++ ++Y ++ + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 216
DL A I+ + ++S FGL ++ + SY + + E L T +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 217 MYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++SFG LL ++ L G IPP +L++ + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 272 SRCLQYEPRERP 283
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 184 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + + PE L + + S ++SFG +L +L +
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 286 RSL 288
R L
Sbjct: 280 RDL 282
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 24/252 (9%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 122
+AVK P R + +E + L + + GCC + E+ LV EY+P +L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L + A L A I E + Y + + ++ +L A ++ D+D ++ F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 183 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 232
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 233 IPPSHALDLI----RDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 285
PP+ L+LI + LT+ G+ E+ L C + E RP
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 286 RSLVTALVTLQK 297
+L+ L T+ +
Sbjct: 282 ENLIPILKTVHE 293
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ +L I+ +++ ++ FG
Sbjct: 103 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFG 160
Query: 184 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + Y + + + PE L + + S ++SFG +L +L +
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 220
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 221 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
Query: 286 RSL 288
R L
Sbjct: 281 RDL 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 24/255 (9%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE-GDERL-LVAEYMPNDTL 122
+AVK A P R + +E + L + + GCC + G L LV EY+P +L
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L + A L A I E + Y + + ++ DL A ++ D+D ++ F
Sbjct: 123 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 183 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 232
GL K +G + + + PE L+ + S ++SFG L +LL+
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238
Query: 233 IPPSHALDLI----RDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 285
PP+ L+LI + LT+ G+ E+ L C + E RP
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTF 298
Query: 286 RSLVTALVTLQKDTE 300
+L+ L T+ + +
Sbjct: 299 ENLIPILKTVHEKYQ 313
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 105 DYL-QAHAERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 286 RSL 288
R L
Sbjct: 283 RDL 285
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 133 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 190
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
Query: 286 RSL 288
R L
Sbjct: 311 RDL 313
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 286 RSL 288
R L
Sbjct: 280 RDL 282
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 108 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 165
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 226 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
Query: 286 RSL 288
R L
Sbjct: 286 RDL 288
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 107 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 164
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 225 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
Query: 286 RSL 288
R L
Sbjct: 285 RDL 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 109 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 166
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 227 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
Query: 286 RSL 288
R L
Sbjct: 287 RDL 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 286 RSL 288
R L
Sbjct: 298 RDL 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 286 RSL 288
R L
Sbjct: 298 RDL 300
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 100 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 157
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 218 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
Query: 286 RSL 288
R L
Sbjct: 278 RDL 280
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 105 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 286 RSL 288
R L
Sbjct: 283 RDL 285
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 286 RSL 288
R L
Sbjct: 280 RDL 282
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 101 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 158
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 219 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 286 RSL 288
R L
Sbjct: 279 RDL 281
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ EY+P +L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
+L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 106 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 163
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 224 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
Query: 286 RSL 288
R L
Sbjct: 284 RDL 286
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 66 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 122
+AVK +A P + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 123 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
+ L H + + + + A I++ ++Y ++ + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 216
DL A I+ + ++S FGL ++ + S + + E L T +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 217 MYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++SFG LL ++ L G IPP +L++ + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 272 SRCLQYEPRERP 283
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 46/253 (18%)
Query: 66 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 122
+AVK +A P + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 123 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
+ L H + + + + A I++ ++Y E +L H
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA--EMSLVH 173
Query: 163 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 215
DL A I+ + ++S FGL ++ + S + + E L T +S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 216 VMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270
++SFG LL ++ L G IPP +L++ + D+C E E+ RL
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRL 284
Query: 271 ASRCLQYEPRERP 283
+C + EP +RP
Sbjct: 285 MLQCWKQEPDKRP 297
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ ++AVK + FL EA + L++ +L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
E+M +L L E + + IAE + + + ++ DL A I+
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 320
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL+++
Sbjct: 321 LVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 228 LSGKHIP-PSHA-LDLIR--DRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
++ IP P + ++IR +R + ++C E EL + RC + P ER
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 429
Query: 283 PNPRSLVTALVTLQKDTE 300
P + + L TE
Sbjct: 430 PTFEYIQSVLDDFYTATE 447
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 23/253 (9%)
Query: 55 VYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 108
VYKG L+ + +A+K R FL EA +GQ + + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 109 ERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
+++ EYM N L K L E ++ LR IA ++Y + ++ DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLANMNY-VHRDLAA 175
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRVTPESVMYS 219
I+ + ++ ++S FGL + D +Y+T+ + +T PE + + T S ++S
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235
Query: 220 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
FG ++ ++++ P + + + + D + + +L +C Q E
Sbjct: 236 FGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 291
Query: 280 RERPNPRSLVTAL 292
RP +V+ L
Sbjct: 292 ARRPKFADIVSIL 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 138
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 139 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 250
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 251 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 121
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 122 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 233
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + +L ++ +
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 285
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 26/242 (10%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ ++AVK + FL EA + L++ +L L + + ++
Sbjct: 31 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 88
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
E+M +L L E + + IAE + + + ++ DL A I+
Sbjct: 89 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 147
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL+++
Sbjct: 148 LVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 228 LSGKHIP-PSHA-LDLIR--DRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
++ IP P + ++IR +R + ++C E EL + RC + P ER
Sbjct: 206 VTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 256
Query: 283 PN 284
P
Sbjct: 257 PT 258
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 22/251 (8%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ ++AVK + FL EA + L++ +L L + + ++
Sbjct: 198 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 255
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
E+M +L L E + + IAE + + + ++ DL A I+
Sbjct: 256 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 314
Query: 175 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
+ +++ FGL +R G + + +T PE + G T +S ++SFG LL+++++ IP
Sbjct: 315 LVCKIADFGL---ARVGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
Query: 235 -PSHA-LDLIR--DRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289
P + ++IR +R + ++C E EL + RC + P ERP +
Sbjct: 370 YPGMSNPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQ 420
Query: 290 TALVTLQKDTE 300
+ L TE
Sbjct: 421 SVLDDFYTATE 431
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 123
+AVK+ S R F E + L++ + G C R L+ E++P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
++L + + L+ I + +EY +K R ++ DL I+ +++ ++ FG
Sbjct: 105 EYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 184 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKHI 233
L K + + + + PE L + + S ++SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 234 PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRERPNP 285
PP+ + +I D+ Q + +E G+ +G E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 286 RSL 288
R L
Sbjct: 283 RDL 285
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 119
Query: 121 TLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKERALYHDLNA 166
L ++L E ++++ + A +A +EY SK + ++ DL A
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 178
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 289
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 290 HAVPSQRPTFKQLVEDL 306
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 148
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 149 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 260
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 261 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V EYM N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + +L ++ +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 271
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 309
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 99 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 270
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 271 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 14/225 (6%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
++F E + L + + L G + +V E++P L L + P+KW+++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVK 124
Query: 140 LRVALHIAEALEYCTSKERALYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS 193
LR+ L IA +EY ++ + H DL + I D+ P +++ FGL + S S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184
Query: 194 -YSTNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
N + PE + T ++ YSF +L +L+G+ P + + I +
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMI 242
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L D L + C +P++RP+ +V L L
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 285
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 99 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 270
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 271 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 31 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 90
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 91 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 149
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 150 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 209
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 210 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 262
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 263 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 300
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V E M N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S A++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 34/270 (12%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
+++ +AVK ++ + F EA + L+++ + G C EG L+V EYM +
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 121 TL----------AKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L AK L E P+ L VA +A + Y ++ DL
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 187
Query: 168 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 221
+ + ++ FG+ ++ R G + + PPE + + T ES ++SFG
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 222 TLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276
+L ++ + GK + + A+D I +C E+ + C Q
Sbjct: 248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC---------PPEVYAIMRGCWQ 298
Query: 277 YEPRERPNPRSLVTALVTLQKDTEVPSHVL 306
EP++R + + + L L + V VL
Sbjct: 299 REPQQRHSIKDVHARLQALAQAPPVYLDVL 328
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 57 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 116
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 117 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 175
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 235
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 236 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 288
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 289 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 326
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 198
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 311
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 312 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 271
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 309
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 56 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 115
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 116 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 174
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 175 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 234
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 235 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 287
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 288 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 325
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 46 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 105
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 106 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 164
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 165 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 224
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 225 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 277
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 278 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 315
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 285
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 119
Query: 121 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L ++L H + + + A +A +EY SK + ++ DL A
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 178
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 289
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 290 HAVPSQRPTFKQLVEDL 306
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 40/291 (13%)
Query: 46 EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN 99
E GE A V+ + N + +AVK ++ + F EA + L+++ +
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 100 LLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWET---QPMKWAMRLRVALHI 146
G C EG L+V EYM + L AK L E P+ L VA +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 147 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 200
A + Y ++ DL + + ++ FG+ ++ R G + +
Sbjct: 139 AAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCL 255
PPE + + T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC- 256
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVL 306
E+ + C Q EP++R + + + L L + V VL
Sbjct: 257 --------PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 299
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 24/255 (9%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 122
+AVK P R + E + L + + GCC + E+ LV EY+P +L
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L + A L A I E + Y + + ++ L A ++ D+D ++ F
Sbjct: 101 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDF 156
Query: 183 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 232
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 216
Query: 233 IPPSHALDLIRDRNIQT----LTDSCLEGQFSSDEG---TELVRLASRCLQYEPRERPNP 285
P + +LI Q LT+ G+ E+ L C + E RP
Sbjct: 217 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 276
Query: 286 RSLVTALVTLQKDTE 300
++LV L T Q+ +
Sbjct: 277 QNLVPILQTAQEKYQ 291
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 40/291 (13%)
Query: 46 EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN 99
E GE A V+ + N + +AVK ++ + F EA + L+++ +
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 100 LLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWET---QPMKWAMRLRVALHI 146
G C EG L+V EYM + L AK L E P+ L VA +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 147 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 200
A + Y ++ DL + + ++ FG+ ++ R G + +
Sbjct: 145 AAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCL 255
PPE + + T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC- 262
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVL 306
E+ + C Q EP++R + + + L L + V VL
Sbjct: 263 --------PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 305
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 24/255 (9%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 122
+AVK P R + E + L + + GCC + E+ LV EY+P +L
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L + A L A I E + Y + + ++ L A ++ D+D ++ F
Sbjct: 100 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDF 155
Query: 183 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 232
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 215
Query: 233 IPPSHALDLIRDRNIQT----LTDSCLEGQFSSDEG---TELVRLASRCLQYEPRERPNP 285
P + +LI Q LT+ G+ E+ L C + E RP
Sbjct: 216 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 275
Query: 286 RSLVTALVTLQKDTE 300
++LV L T Q+ +
Sbjct: 276 QNLVPILQTAQEKYQ 290
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 66 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 125
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 126 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 184
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 206
+ ++ D+ A + R++ G +RD G + + PPE
Sbjct: 185 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 245 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKNC 297
Query: 266 --ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 298 PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 335
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 34/279 (12%)
Query: 48 GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 100
G A VY+G++ ++AVK + D FL EA + + ++ +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 155
+G + R ++ E M L L +QP AM L VA IA +Y
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL-- 157
Query: 156 KERALYHDLNAYRIVFDDDVNP----RLSCFGLMKN------SRDGRSYSTNLAFTPPEY 205
+E H A R P ++ FG+ ++ R G + + PPE
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 206 LRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264
G T ++ +SFG LL ++ S ++P PS + N + L G+ +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFVTSGGRMDPPKN 270
Query: 265 T--ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 271 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 309
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 160
Query: 121 TLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKERALYHDLNA 166
L ++L ++++ + A +A +EY SK + ++ DL A
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 219
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 280 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 330
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 331 HAVPSQRPTFKQLVEDL 347
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 111
Query: 121 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L ++L H + + + A +A +EY SK + ++ DL A
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 170
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 231 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 281
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 282 HAVPSQRPTFKQLVEDL 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 119
Query: 121 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L ++L H + + + A +A +EY SK + ++ DL A
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 178
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 289
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 290 HAVPSQRPTFKQLVEDL 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 26/289 (8%)
Query: 23 FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 82
+C+ +I+ + F + HG +V K +E F +R N +F
Sbjct: 36 WCDLNIKE-KIGAGSFGTVHRAEWHGS---DVAVKILMEQDFH--AERVN--------EF 81
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRL 140
L E + +LR+ + +G + +V EY+ +L + L H + + RL
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRL 140
Query: 141 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 199
+A +A+ + Y ++ + H DL + ++ D ++ FGL + S A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 200 FTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 255
TP PE LR +S +YSFG +L +L + + P L+ + + + C
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ--PWGNLN--PAQVVAAVGFKCK 256
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
+ + ++ + C EP +RP+ +++ L L K P +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 108
Query: 121 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L ++L H + + + A +A +EY SK + ++ DL A
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 167
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 228 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 278
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 279 HAVPSQRPTFKQLVEDL 295
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 65 RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
++AVK A D +E + +G+ +N + NLLG C + ++ EY
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 112
Query: 121 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L ++L H + + + A +A +EY SK + ++ DL A
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 171
Query: 167 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 220
++ +D +++ FGL ++ D +TN + + PE L T +S ++SF
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 221 GTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ L G +P L+++ + +C EL + C
Sbjct: 232 GVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NELYMMMRDCW 282
Query: 276 QYEPRERPNPRSLVTAL 292
P +RP + LV L
Sbjct: 283 HAVPSQRPTFKQLVEDL 299
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K ++AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 54 KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 111
Query: 113 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 158
+ EY L ++L H + + + A +A +EY SK +
Sbjct: 112 IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 170
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ +D +++ FGL ++ D +TN + + PE L T
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG LL ++ L G +P L+++ + +C EL
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NEL 281
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + +L G G ++V E+M N L L + Q ++
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--YS 195
LR IA + Y ++ DL A I+ + ++ ++S FGL + D Y+
Sbjct: 149 GMLR---GIAAGMRYLADMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE ++ + T S ++S+G ++ +++S P D + Q +
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 257
Query: 251 TDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
+ EG D L +L C Q E ERP +V L
Sbjct: 258 IKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K ++AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 39 KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 96
Query: 113 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 158
+ EY L ++L H + + + A +A +EY SK +
Sbjct: 97 IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 155
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ +D +++ FGL ++ D +TN + + PE L T
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG LL ++ L G +P L+++ + +C EL
Sbjct: 216 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT---------NEL 266
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 267 YMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 105/251 (41%), Gaps = 20/251 (7%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 115
GK + ++AVK +A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 63 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 116 YMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
Y L L + +P++ L + +A+ + + SK ++ D+ A
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 181
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
++ + ++ FGL ++ + +Y + + PE + T +S ++S+G
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 222 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
LL ++ S P + L+ + + + D Q + + + C EP
Sbjct: 242 ILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTH 298
Query: 282 RPNPRSLVTAL 292
RP + + + L
Sbjct: 299 RPTFQQICSFL 309
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 32/261 (12%)
Query: 48 GEKAPNVVYKGKLENQ----FRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
GE V +G L+ + ++AVK + + S+ + +FL EA + + + LL
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 102 GCCCEGDER-----LLVAEYMPNDTLAKHLFH--WETQPMKWAMR--LRVALHIAEALEY 152
G C E + +++ +M L +L + ET P ++ L+ + IA +EY
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 153 CTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYL 206
+++ L+ DL A + DD+ ++ FGL K R GR + + E L
Sbjct: 163 LSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 207 RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDE 263
T +S +++FG + ++ + P + + D L G + D
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-------HEMYDYLLHGHRLKQPEDC 274
Query: 264 GTELVRLASRCLQYEPRERPN 284
EL + C + +P +RP
Sbjct: 275 LDELYEIMYSCWRTDPLDRPT 295
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V E M N +L L + Q ++
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 121
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 122 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 233
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + +L G + +++ E+M N +L L + Q ++
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---Y 194
LR IA ++Y ++ DL A I+ + ++ ++S FGL + D S Y
Sbjct: 139 GMLR---GIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 195 STNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
++ L +T PE ++ + T S ++S+G ++ +++S
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 14/225 (6%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
++F E + L + + L G + +V E++P L L + P+KW+++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVK 124
Query: 140 LRVALHIAEALEYCTSKERALYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS 193
LR+ L IA +EY ++ + H DL + I D+ P +++ FG + S S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS 184
Query: 194 -YSTNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
N + PE + T ++ YSF +L +L+G+ P + + I +
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMI 242
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L D L + C +P++RP+ +V L L
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ R++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 101
G A VYKG + +A+K N + P A +F++EA + + + L LL
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
G C + LV + MP+ L +++ H + + L + IA+ + Y +ER L
Sbjct: 107 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 162
Query: 162 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 214
H DL A ++ + +++ FGL + D + Y+ + P +++ + T +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 215 SVMYSFGTLLLDLLS 229
S ++S+G + +L++
Sbjct: 223 SDVWSYGVTIWELMT 237
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G + ++V E M N +L L + Q ++
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR IA ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G +L +++S P + ++++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKA 262
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
D D L +L C Q + RP +V+ L L ++
Sbjct: 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 105/251 (41%), Gaps = 20/251 (7%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 115
GK + ++AVK +A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 116 YMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
Y L L + +P++ L + +A+ + + SK ++ D+ A
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 189
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
++ + ++ FGL ++ + +Y + + PE + T +S ++S+G
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 222 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
LL ++ S P + L+ + + + D Q + + + C EP
Sbjct: 250 ILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTH 306
Query: 282 RPNPRSLVTAL 292
RP + + + L
Sbjct: 307 RPTFQQICSFL 317
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 55 VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110
+ K K + +AVK A D +E + +G+ +N + NLLG C +
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 156
++ EY L ++L M+++ + RV +A +EY S
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 210
++ ++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 211 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
T +S ++SFG L+ ++ L G IP L+++ + +C
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 266 ELVRLASRCLQYEPRERPNPRSLVTAL 292
EL + C P +RP + LV L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 101
G A VYKG + +A+K N + P A +F++EA + + + L LL
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
G C + LV + MP+ L +++ H + + L + IA+ + Y + R ++
Sbjct: 84 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 140
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPES 215
DL A ++ + +++ FGL + D + Y+ + P +++ + T +S
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 200
Query: 216 VMYSFGTLLLDLLS 229
++S+G + +L++
Sbjct: 201 DVWSYGVTIWELMT 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 37 GFAMENIVSEH--GEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAV 89
G A E++V GE VY+G N + +AVK + D ++ F+ EA +
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 90 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 149
L + + L+G E + ++ E P L H +K + +L I +A
Sbjct: 68 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 125
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PE 204
+ Y S ++ D+ I+ +L FGL + D Y ++ P PE
Sbjct: 126 MAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQF 259
+ R T S ++ F + ++LS GK + + ++ + D C
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----- 239
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
L L +RC Y+P +RP LV +L
Sbjct: 240 ----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 14/225 (6%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
++F E + L + + L G + +V E++P L L + P+KW+++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVK 124
Query: 140 LRVALHIAEALEYCTSKERALYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS 193
LR+ L IA +EY ++ + H DL + I D+ P +++ F L + S S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS 184
Query: 194 -YSTNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
N + PE + T ++ YSF +L +L+G+ P + + I +
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYSYGKIKFINMI 242
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L D L + C +P++RP+ +V L L
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G G ++V EYM N +L L + Q M+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYS 195
LR + + Y S ++ DL A ++ D ++ ++S FGL + D +Y+
Sbjct: 155 GMLR---GVGAGMRYL-SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
T + +T PE + + S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E + + ++ +R + +L D LV M L H++H A +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---TNLA 199
A I LE +ER +Y DL I+ DD + R+S GL + +G++ +
Sbjct: 292 AAEICCGLED-LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259
+ PE ++ R T ++ G LL ++++G+ P I+ ++ L E ++
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EY 408
Query: 260 SSDEGTELVRLASRCLQYEPRER 282
S + L S+ L +P ER
Sbjct: 409 SERFSPQARSLCSQLLCKDPAER 431
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E + + ++ +R + +L D LV M L H++H A +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---TNLA 199
A I LE +ER +Y DL I+ DD + R+S GL + +G++ +
Sbjct: 292 AAEICCGLED-LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259
+ PE ++ R T ++ G LL ++++G+ P I+ ++ L E ++
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EY 408
Query: 260 SSDEGTELVRLASRCLQYEPRER 282
S + L S+ L +P ER
Sbjct: 409 SERFSPQARSLCSQLLCKDPAER 431
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 223 LLLDLLSGKHIPP 235
+ ++++ G+ PP
Sbjct: 205 MAIEMIEGE--PP 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 48 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 105
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 106 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 164
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 275
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 276 YMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 37 GFAMENIVSEH--GEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAV 89
G A E++V GE VY+G N + +AVK + D ++ F+ EA +
Sbjct: 20 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 90 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 149
L + + L+G E + ++ E P L H +K + +L I +A
Sbjct: 80 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 137
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PE 204
+ Y S ++ D+ I+ +L FGL + D Y ++ P PE
Sbjct: 138 MAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQF 259
+ R T S ++ F + ++LS GK + + ++ + D C
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----- 251
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
L L +RC Y+P +RP LV +L
Sbjct: 252 ----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 37 GFAMENIVSEH--GEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAV 89
G A E++V GE VY+G N + +AVK + D ++ F+ EA +
Sbjct: 4 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 90 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 149
L + + L+G E + ++ E P L H +K + +L I +A
Sbjct: 64 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 121
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PE 204
+ Y S ++ D+ I+ +L FGL + D Y ++ P PE
Sbjct: 122 MAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQF 259
+ R T S ++ F + ++LS GK + + ++ + D C
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----- 235
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
L L +RC Y+P +RP LV +L
Sbjct: 236 ----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 23/231 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
R FL EA +GQ + + +L G + +++ EYM N +L L ++ +
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI 131
Query: 140 LRVAL--HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
V + I ++Y S A++ DL A I+ + ++ ++S FG+ + D +Y+
Sbjct: 132 QLVGMLRGIGSGMKYL-SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G ++ +++S P D + Q +
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 243
Query: 251 TDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
+ EG D L +L C Q E +RP +V L L ++
Sbjct: 244 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 12/247 (4%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 145
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 223 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ ++++ G+ PP + +R + T+ E Q +RCL+ + +R
Sbjct: 206 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 283 PNPRSLV 289
+ + L+
Sbjct: 263 GSAKELI 269
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 119/289 (41%), Gaps = 26/289 (8%)
Query: 23 FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 82
+C+ +I+ + F + HG +V K +E F +R N +F
Sbjct: 36 WCDLNIKE-KIGAGSFGTVHRAEWHGS---DVAVKILMEQDFH--AERVN--------EF 81
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRL 140
L E + +LR+ + +G + +V EY+ +L + L H + + RL
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRL 140
Query: 141 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 199
+A +A+ + Y ++ + H +L + ++ D ++ FGL + S + A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 200 FTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 255
TP PE LR +S +YSFG +L +L + + P L+ + + + C
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ--PWGNLN--PAQVVAAVGFKCK 256
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
+ + ++ + C EP +RP+ +++ L L K P +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 223 LLLDLLSGKHIPP 235
+ ++++ G+ PP
Sbjct: 205 MAIEMIEGE--PP 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 50 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 107
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 108 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 166
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 277
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 278 YMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 53 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 110
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 111 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 169
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 280
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 281 YMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + L G G ++V EYM N +L L + Q M+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSY 194
LR + + Y S ++ DL A ++ D ++ ++S FGL +++ D
Sbjct: 155 GMLR---GVGAGMRYL-SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 195 STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
+T + +T PE + + S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + +L G + ++V EYM N +L L + Q ++
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
LR I+ ++Y S ++ DL A I+ + ++ ++S FGL + D +Y+
Sbjct: 128 GMLR---GISAGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
T + +T PE + + T S ++S+G ++ +++S
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 223 LLLDLLSGKHIPP 235
+ ++++ G+ PP
Sbjct: 205 MAIEMIEGE--PP 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 41/267 (15%)
Query: 55 VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110
+ K K + +AVK A D +E + +G+ +N + NLLG C +
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 111 LLVAEYMPNDTLAKHL-----------FHWETQP---MKWAMRLRVALHIAEALEYCTSK 156
++ EY L ++L + P M + + +A +EY S
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 210
++ ++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 211 VTPESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
T +S ++SFG L+ ++ L G IP L+++ + +C
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------N 286
Query: 266 ELVRLASRCLQYEPRERPNPRSLVTAL 292
EL + C P +RP + LV L
Sbjct: 287 ELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 40/261 (15%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAM 138
R FL+E + + L + + +G + D+RL + EY+ TL + ++Q W+
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQ 109
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-------------- 184
R+ A IA + Y S ++ DLN++ + ++ N ++ FGL
Sbjct: 110 RVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 185 --MKNSRDGRSYST--NLAFTPPEYLRTGRVTPESV-MYSFGTLLLDLLSGKHIPPSHAL 239
+K + Y+ N + PE + GR E V ++SFG +L +++ + P +
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDY-- 225
Query: 240 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299
L R + L+ + + RC +P +RP+ L L TL+
Sbjct: 226 -LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM-- 282
Query: 300 EVPSHVLMGIPHGAAALPLSP 320
H A LPL P
Sbjct: 283 -----------HLAGHLPLGP 292
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 24/255 (9%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 115
GK + ++AVK +A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 116 YMPNDTLAKHLFH----WETQP----MKWAMRLRVALH----IAEALEYCTSKERALYHD 163
Y L L ET P + R LH +A+ + + SK ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN-CIHRD 189
Query: 164 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVM 217
+ A ++ + ++ FGL ++ + +Y + + PE + T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 218 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277
+S+G LL ++ S P + L+ + + + D Q + + + C
Sbjct: 250 WSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWAL 306
Query: 278 EPRERPNPRSLVTAL 292
EP RP + + + L
Sbjct: 307 EPTHRPTFQQICSFL 321
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 22/241 (9%)
Query: 66 IAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+A+K +++ D + E A+ LR++ + L ++ +V EY P L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 125 HLFHWETQPMKWAMRLRVAL-HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183
++ +Q RV I A+ Y S+ A + DL ++FD+ +L FG
Sbjct: 98 YII---SQDRLSEEETRVVFRQIVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKLIDFG 153
Query: 184 LMKNSRDGRSYST-----NLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSH 237
L + + Y +LA+ PE ++ + E+ ++S G LL L+ G +P
Sbjct: 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG-FLP--- 209
Query: 238 ALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
D N+ L + G++ + + L + LQ +P++R + ++L+ +
Sbjct: 210 ----FDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 265
Query: 296 Q 296
Q
Sbjct: 266 Q 266
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 107 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 164
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 223
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 334
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 335 YMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 26/273 (9%)
Query: 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNR 95
F N +++ E ++KG+ + I VK W +R F EE + +
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 96 RLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 153
+ +LG C L+ +MP +L L + + ++ AL +A + +
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 154 TSKERAL-YHDLNAYRIVFDDDVNPRLSCFGL-MKNSRDGRSYSTNLAFTPPEYLR---- 207
+ E + H LN+ ++ D+D+ R+S + GR Y+ A+ PE L+
Sbjct: 128 HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP--AWVAPEALQKKPE 185
Query: 208 -TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDE 263
T R + + M+SF LL +L++ + +P DL N++ LEG
Sbjct: 186 DTNRRSAD--MWSFAVLLWELVT-REVP---FADL---SNMEIGMKVALEGLRPTIPPGI 236
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296
+ +L C+ +P +RP +V L +Q
Sbjct: 237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 12/247 (4%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +ALE+ S + ++ ++ +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRNIKS 145
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 223 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ ++++ G+ PP + +R + T+ E Q +RCL+ + +R
Sbjct: 206 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 283 PNPRSLV 289
+ + L+
Sbjct: 263 GSAKELI 269
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 26/256 (10%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 115
GK + ++AVK +A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 116 YMPNDTLAKHLFH----WETQPMKWAMR---------LRVALHIAEALEYCTSKERALYH 162
Y L L ET P +A+ L + +A+ + + SK ++
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDP-AFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHR 188
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 216
D+ A ++ + ++ FGL ++ + +Y + + PE + T +S
Sbjct: 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 248
Query: 217 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276
++S+G LL ++ S P + L+ + + + D Q + + + C
Sbjct: 249 VWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWA 305
Query: 277 YEPRERPNPRSLVTAL 292
EP RP + + + L
Sbjct: 306 LEPTHRPTFQQICSFL 321
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 33/264 (12%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 115
GK + ++AVK +A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 56 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Query: 116 Y----------------MPNDTLA-----KHLFHWETQPMKWAMRLRVALHIAEALEYCT 154
Y M +LA + L + +P++ L + +A+ + +
Sbjct: 116 YCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA 175
Query: 155 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRT 208
SK ++ D+ A ++ + ++ FGL ++ + +Y + + PE +
Sbjct: 176 SK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 209 GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268
T +S ++S+G LL ++ S P + L+ + + + D Q + +
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIY 291
Query: 269 RLASRCLQYEPRERPNPRSLVTAL 292
+ C EP RP + + + L
Sbjct: 292 SIMQACWALEPTHRPTFQQICSFL 315
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 65 RIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT-- 121
++A+KR N + L+E +A+ Q + + + DE LV + + +
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 122 -LAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177
+ KH+ ++ + + + + E LEY K ++ D+ A I+ +D +
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL-HKNGQIHRDVKAGNILLGEDGSV 160
Query: 178 RLSCFGLMKNSRDGRSYSTN-----LAFTP----PEYLRTGR-VTPESVMYSFGTLLLDL 227
+++ FG+ G + N TP PE + R ++ ++SFG ++L
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 228 LSG----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+G PP L L + +L + + G ++ S CLQ +P +RP
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
Query: 284 NPRSLV 289
L+
Sbjct: 281 TAAELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 65 RIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT-- 121
++A+KR N + L+E +A+ Q + + + DE LV + + +
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 122 -LAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177
+ KH+ ++ + + + + E LEY K ++ D+ A I+ +D +
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL-HKNGQIHRDVKAGNILLGEDGSV 155
Query: 178 RLSCFGLMKNSRDGRSYSTN-----LAFTP----PEYLRTGR-VTPESVMYSFGTLLLDL 227
+++ FG+ G + N TP PE + R ++ ++SFG ++L
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 228 LSG----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+G PP L L + +L + + G ++ S CLQ +P +RP
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 275
Query: 284 NPRSLV 289
L+
Sbjct: 276 TAAELL 281
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R FL EA +GQ + + +L G + +++ E+M N +L L + Q ++
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---Y 194
LR IA ++Y ++ L A I+ + ++ ++S FGL + D S Y
Sbjct: 113 GMLR---GIAAGMKYLADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 195 STNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
++ L +T PE ++ + T S ++S+G ++ +++S
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + +LLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IIHLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
R FL EA +GQ + + +L G + +++ EYM N +L L ++ +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI 116
Query: 140 LRVAL--HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
V + I ++Y S ++ DL A I+ + ++ ++S FG+ + D +Y+
Sbjct: 117 QLVGMLRGIGSGMKY-LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G ++ +++S P D + Q +
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 228
Query: 251 TDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
+ EG D L +L C Q E +RP +V L L ++
Sbjct: 229 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
R FL EA +GQ + + +L G + +++ EYM N +L L ++ +
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI 110
Query: 140 LRVAL--HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
V + I ++Y S ++ DL A I+ + ++ ++S FG+ + D +Y+
Sbjct: 111 QLVGMLRGIGSGMKY-LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 196 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
T + +T PE + + T S ++S+G ++ +++S P D + Q +
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 222
Query: 251 TDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
+ EG D L +L C Q E +RP +V L L ++
Sbjct: 223 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 65 RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++A+K N+ A D + +E E + LR+ + L DE ++V EY N+
Sbjct: 41 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 99
Query: 122 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179
LF + Q K + + R I A+EYC + + ++ DL ++ D+ +N ++
Sbjct: 100 ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 154
Query: 180 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRVT--PESVMYSFGTLLLDLL 228
+ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 155 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 65 RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++A+K N+ A D + +E E + LR+ + L DE ++V EY N+
Sbjct: 40 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 98
Query: 122 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179
LF + Q K + + R I A+EYC + + ++ DL ++ D+ +N ++
Sbjct: 99 ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 153
Query: 180 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRVT--PESVMYSFGTLLLDLL 228
+ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 154 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + LLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IITLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ EY L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 65 RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++A+K N+ A D + +E E + LR+ + L DE ++V EY N+
Sbjct: 35 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 93
Query: 122 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179
LF + Q K + + R I A+EYC + + ++ DL ++ D+ +N ++
Sbjct: 94 ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 148
Query: 180 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRVT--PESVMYSFGTLLLDLL 228
+ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 149 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 104/257 (40%), Gaps = 26/257 (10%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 115
GK + ++AVK +A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 116 YMPNDTLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKERALY 161
Y L L ++++ L + +A+ + + SK ++
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK-NCIH 189
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 215
D+ A ++ + ++ FGL ++ + +Y + + PE + T +S
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 216 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
++S+G LL ++ S P + L+ + + + D Q + + + C
Sbjct: 250 DVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACW 306
Query: 276 QYEPRERPNPRSLVTAL 292
EP RP + + + L
Sbjct: 307 ALEPTHRPTFQQICSFL 323
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ Y L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 65 RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++A+K N+ A D + +E E + LR+ + L DE ++V EY N+
Sbjct: 31 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 89
Query: 122 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179
LF + Q K + + R I A+EYC + + ++ DL ++ D+ +N ++
Sbjct: 90 ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 144
Query: 180 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRVT--PESVMYSFGTLLLDLL 228
+ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 145 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 57 KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
K K + +AVK A D +E + +G+ +N + NLLG C + +
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPLYV 118
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSKER 158
+ Y L ++L M+++ + RV +A +EY S ++
Sbjct: 119 IVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QK 177
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGRVT 212
++ DL A ++ ++ +++ FGL + N+ D +TN + + PE L T
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 213 PESVMYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
+S ++SFG L+ ++ L G IP L+++ + +C EL
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NEL 288
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
+ C P +RP + LV L
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 33/244 (13%)
Query: 43 IVSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNR 95
+ E GE VYKG L E +A+K +++ P +F EA +L++
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLF----HWET------QPMKWAMR----LR 141
+ LLG + ++ Y + L + L H + + +K A+ +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----- 196
+ IA +EY +S ++ DL ++ D +N ++S GL + Y
Sbjct: 150 LVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 197 -NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTL 250
+ + PE + G+ + +S ++S+G +L ++ S P +++IR+R +
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 268
Query: 251 TDSC 254
D C
Sbjct: 269 PDDC 272
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 33/244 (13%)
Query: 43 IVSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNR 95
+ E GE VYKG L E +A+K +++ P +F EA +L++
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLF----HWET------QPMKWAMR----LR 141
+ LLG + ++ Y + L + L H + + +K A+ +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----- 196
+ IA +EY +S ++ DL ++ D +N ++S GL + Y
Sbjct: 133 LVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 197 -NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTL 250
+ + PE + G+ + +S ++S+G +L ++ S P +++IR+R +
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 251
Query: 251 TDSC 254
D C
Sbjct: 252 PDDC 255
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R+FL EA +GQ + + L G +++ E+M N L L + Q ++
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRS 193
LR IA + Y ++ ++ DL A I+ + ++ ++S FGL + NS D +
Sbjct: 120 GMLR---GIASGMRYL-AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP-T 174
Query: 194 YSTNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 247
Y+++L +T PE + + T S +S+G ++ +++S P D +
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------YWDMSN 227
Query: 248 QTLTDSCLEGQF----SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
Q + ++ +E + D T L +L C Q + RP +V+AL
Sbjct: 228 QDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+A+K +++ P + Q E R + L + + L L+ EY +
Sbjct: 40 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 99
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K R ++ DL A ++ D D+N +++ F
Sbjct: 100 DYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADF 155
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G T P PE + + PE ++S G +L L+SG S
Sbjct: 156 GFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 210
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 211 FD---GQNLKELRERVLRGKY 228
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 24/235 (10%)
Query: 65 RIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++AVK NR + + E + + R+ + L + +V EY+
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 122 LAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 180
L ++ H + M+ R+ I A++YC + ++ DL ++ D +N +++
Sbjct: 98 LFDYICKHGRVEEMEAR---RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 181 CFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLLSGKHIPP 235
FGL DG T+ + PE + +GR+ PE ++S G +L LL G +P
Sbjct: 154 DFGLSNMMSDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGT-LP- 210
Query: 236 SHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPNPRSL 288
D ++ TL G F E + L LQ +P +R + +
Sbjct: 211 ------FDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170
+ E+ TL + + + + + L + I + ++Y SK + ++ DL I
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLIHRDLKPSNIF 168
Query: 171 FDDDVNPRLSCFGLMKNSR-DGRSYSTN--LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
D ++ FGL+ + + DG+ + L + PE + + E +Y+ G +L +L
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 228 LSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285
L H D + + L D + F E T L +L S+ +P +RPN
Sbjct: 229 L--------HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK----KPEDRPNT 276
Query: 286 RSLVTALVTLQKDTE 300
++ L +K E
Sbjct: 277 SEILRTLTVWKKSPE 291
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 29/254 (11%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 137
R+FL EA +GQ + + L G +++ E+M N L L + Q ++
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 138 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRS 193
LR IA + Y ++ ++ DL A I+ + ++ ++S FGL + NS D
Sbjct: 122 GMLR---GIASGMRYL-AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 194 YST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
S+ + +T PE + + T S +S+G ++ +++S P D + Q
Sbjct: 178 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------YWDMSNQ 230
Query: 249 TLTDSCLEGQF----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
+ ++ +E + D T L +L C Q + RP +V+AL + ++ S
Sbjct: 231 DVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPA--SL 287
Query: 305 VLMGIPHGAAALPL 318
++ +G A+ PL
Sbjct: 288 KIVARENGGASHPL 301
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK +++ P + Q E R + L + + L LV EY +
Sbjct: 43 VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 102
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K ++ DL A ++ D D+N +++ F
Sbjct: 103 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-YIVHRDLKAENLLLDGDMNIKIADF 158
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G T P PE + + PE ++S G +L L+SG S
Sbjct: 159 GFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 213
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 214 FD---GQNLKELRERVLRGKY 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
E+ TL + + + + + L + I + ++Y SK + + DL I D
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDT 158
Query: 175 VNPRLSCFGLMKNSR-DGRSYSTN--LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
++ FGL+ + + DG+ + L + PE + + E +Y+ G +L +LL
Sbjct: 159 KQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--- 215
Query: 232 HIPPSHALDLIRD--RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289
H D + + L D + F E T L +L S+ +P +RPN ++
Sbjct: 216 -----HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK----KPEDRPNTSEIL 266
Query: 290 TALVTLQKDTE 300
L +K E
Sbjct: 267 RTLTVWKKSPE 277
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK +++ + ++ E R + L + + L LV EY +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K ++ DL A ++ D D+N +++ F
Sbjct: 102 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADF 157
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G T P PE + + PE ++S G +L L+SG S
Sbjct: 158 GFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 212
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 213 FD---GQNLKELRERVLRGKY 230
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 21 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IAE + Y +
Sbjct: 81 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAEGMNYLEDR- 133
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 249
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 250 VKCWMIDADSRPKFRELIIEFSKMARDPQ 278
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK +++ + ++ E R + L + + L LV EY +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K ++ DL A ++ D D+N +++ F
Sbjct: 102 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADF 157
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G T P PE + + PE ++S G +L L+SG S
Sbjct: 158 GFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 212
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 213 FD---GQNLKELRERVLRGKY 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 24/235 (10%)
Query: 65 RIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++AVK NR + + E + + R+ + L + +V EY+
Sbjct: 38 KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 122 LAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 180
L ++ H + M+ R+ I A++YC + ++ DL ++ D +N +++
Sbjct: 98 LFDYICKHGRVEEMEAR---RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 181 CFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRV--TPESVMYSFGTLLLDLLSGKHIPP 235
FGL DG R + + PE + +GR+ PE ++S G +L LL G +P
Sbjct: 154 DFGLSNMMSDGEFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGT-LP- 210
Query: 236 SHALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRERPNPRSL 288
D ++ TL G F E + L LQ +P +R + +
Sbjct: 211 ------FDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+A+K +++ P + Q E R + L + + L L+ EY +
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 102
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K R ++ DL A ++ D D+N +++ F
Sbjct: 103 DYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADF 158
Query: 183 GLMKNSRDG---RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G ++ + PE + + PE ++S G +L L+SG S
Sbjct: 159 GFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 213
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 214 FD---GQNLKELRERVLRGKY 231
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 54 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 109
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 110 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 224
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 225 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 140
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 141 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 255
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 256 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 115
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 116 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 230
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 231 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 117
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 118 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 232
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 233 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL---RNRRLANLLGCCCEGDERLLVAEYM 117
+ Q ++A+K +R + + R + L R+ + L + ++V EY
Sbjct: 32 KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA 91
Query: 118 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175
+ LF + E + M R I A+EYC + + ++ DL ++ DD++
Sbjct: 92 GGE-----LFDYIVEKKRMTEDEGRRFFQQIICAIEYC-HRHKIVHRDLKPENLLLDDNL 145
Query: 176 NPRLSCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRVT--PESVMYSFGTLLLDLLSG 230
N +++ FGL DG T+ + PE + G++ PE ++S G +L +L G
Sbjct: 146 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVG 204
Query: 231 K 231
+
Sbjct: 205 R 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 112
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 113 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 227
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ L L ++C Y+P RP L L T+ ++ ++
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 114
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 115 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 229
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 230 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLAS 112
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 113 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 227
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ L L ++C Y+P RP L L T+ ++ ++
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 65 RIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDTL 122
++AVK A R+ + E + + QL + + NLLG C L+ EY L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 123 AKHL-----------FHWETQP----------MKWAMRLRVALHIAEALEYCTSKERALY 161
+L +E Q + + L A +A+ +E+ K ++
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVH 195
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 215
DL A ++ ++ FGL ++ +Y + + PE L G T +S
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 216 VMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274
++S+G LL ++ S G + P +D + IQ ++ F + E E+ + C
Sbjct: 256 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK--MDQPFYATE--EIYIIMQSC 311
Query: 275 LQYEPRERPNPRSLVTALVTLQKDTE 300
++ R+RP+ +L + L D E
Sbjct: 312 WAFDSRKRPSFPNLTSFLGCQLADAE 337
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLR 141
+ E R + RN L CC + +RL V E++ L +FH + R R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR 127
Query: 142 V-ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRSYST 196
A I AL + K +Y DL ++ D + + +L+ FG+ K N ++
Sbjct: 128 FYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
+ PE L+ P ++ G LL ++L G H P
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAP 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 30 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 90 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 142
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 258
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 259 VKCWMIDADSRPKFRELIIEFSKMARDPQ 287
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 255
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 256 RKCWMIDADSRPKFRELIIEFSKMARDPQ 284
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 17/185 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-HWETQPMKWAM 138
++ E R + L + + L LV EY + +L H + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL 198
+ R I A++YC K ++ DL A ++ D D+N +++ FG G T
Sbjct: 118 KFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 199 AFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC 254
P PE + + PE ++S G +L L+SG S D +N++ L +
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERV 225
Query: 255 LEGQF 259
L G++
Sbjct: 226 LRGKY 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 65 RIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
++AVK NR + + E + + R+ + L + +V EY+
Sbjct: 43 KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE 102
Query: 122 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181
L ++ K + RL I ++YC + ++ DL ++ D +N +++
Sbjct: 103 LFDYICKNGRLDEKESRRL--FQQILSGVDYC-HRHMVVHRDLKPENVLLDAHMNAKIAD 159
Query: 182 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVT--PESVMYSFGTLLLDLLSGKHIPPS 236
FGL DG R + + PE + +GR+ PE ++S G +L LL G +P
Sbjct: 160 FGLSNMMSDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGT-LP-- 215
Query: 237 HALDLIRDRNIQTLTDSCLEGQFSSDE--GTELVRLASRCLQYEPRER 282
D ++ TL +G F + + ++ L LQ +P +R
Sbjct: 216 -----FDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKR 258
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 255
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 256 VKCWMIDADSRPKFRELIIEFSKMARDPQ 284
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 255
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 256 VKCWMIDADSRPKFRELIIEFSKMARDPQ 284
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 86 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 255 VKCWMIDADSRPKFRELIIEFSKMARDPQ 283
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 143
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 259
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 260 VKCWMIDADSRPKFRELIIEFSKMARDPQ 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK +++ + ++ E R + L + + L LV EY +
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 94
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K ++ DL A ++ D D+N +++ F
Sbjct: 95 DYLVAHGWMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADF 150
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G T P PE + + PE ++S G +L L+SG S
Sbjct: 151 GFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 205
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 206 FD---GQNLKELRERVLRGKY 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 252
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 253 RKCWMIDADSRPKFRELIIEFSKMARDPQ 281
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKFSLDLAS 492
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D Y +
Sbjct: 493 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 607
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 108/277 (38%), Gaps = 43/277 (15%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 102 GCCCEGDERLLVAEYMPNDTL------------AKHLFHWETQPMKWAMRLRVALHIAEA 149
G C + L+ + MP L +++L +W Q IA+
Sbjct: 84 GICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ-------------IAKG 129
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRT 208
+ Y + R ++ DL A ++ + +++ FGL K + + Y P +++
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 209 GRV-----TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
+ T +S ++S+G + +L++ P D I I ++ +
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPIC 244
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
++ + +C + RP R L+ + +D +
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 281
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 140
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 256
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 257 VKCWMIDADSRPKFRELIIEFSKMARDPQ 285
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 255 VKCWMIDADSRPKFRELIIEFSKMARDPQ 283
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 109/277 (39%), Gaps = 43/277 (15%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 102 GCCCEGDERLLVAEYMPNDTL------------AKHLFHWETQPMKWAMRLRVALHIAEA 149
G C +L++ + MP L +++L +W Q IA+
Sbjct: 85 GICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ-------------IAKG 130
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRT 208
+ Y + R ++ DL A ++ + +++ FGL K + + Y P +++
Sbjct: 131 MNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 209 GRV-----TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
+ T +S ++S+G + +L++ P D I I ++ +
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPIC 245
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
++ + +C + RP R L+ + +D +
Sbjct: 246 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 282
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 252
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 253 VKCWMIDADSRPKFRELIIEFSKMARDPQ 281
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 49 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 109 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 161
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 222 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 277
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 278 VKCWMIDADSRPKFRELIIEFSKMARDPQ 306
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 87 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 255
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 256 VKCWMIDADSRPKFRELIIEFSKMARDPQ 284
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 34 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 94 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 146
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 262
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 263 RKCWMIDADSRPKFRELIIEFSKMARDPQ 291
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 103 CCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
C + E L V EY+ L H+ + A I L++ SK +Y
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSK-GIVY 142
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVM 217
DL I+ D D + +++ FG+ K + G + + TP PE L +
Sbjct: 143 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDW 202
Query: 218 YSFGTLLLDLLSGKHIPPSHALD 240
+SFG LL ++L G+ P H D
Sbjct: 203 WSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 84 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 252
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 253 VKCWMIDADSRPKFRELIIEFSKMARDPQ 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK +++ + ++ E R + L + + L LV EY +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K ++ DL A ++ D D+N +++ F
Sbjct: 102 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADF 157
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G P PE + + PE ++S G +L L+SG S
Sbjct: 158 GFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 212
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 213 FD---GQNLKELRERVLRGKY 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 85 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 137
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 253
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 254 VKCWMIDADSRPKFRELIIEFSKMARDPQ 282
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 103 CCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
C + E L V EY+ L H+ + A I L++ SK +Y
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSK-GIVY 141
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVM 217
DL I+ D D + +++ FG+ K + G + + TP PE L +
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 218 YSFGTLLLDLLSGKHIPPSHALD 240
+SFG LL ++L G+ P H D
Sbjct: 202 WSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 18 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 78 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 130
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 246
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 247 VKCWMIDADSRPKFRELIIEFSKMARDPQ 275
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNLAFTPPEYLRTGRVTPES 215
+Y DL I+ D++ + +L+ FGL K S D S+ + + PE + T +
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSA 208
Query: 216 VMYSFGTLLLDLLSG 230
+SFG L+ ++L+G
Sbjct: 209 DWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNLAFTPPEYLRTGRVTPES 215
+Y DL I+ D++ + +L+ FGL K S D S+ + + PE + T +
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 216 VMYSFGTLLLDLLSG 230
+SFG L+ ++L+G
Sbjct: 208 DWWSFGVLMFEMLTG 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 35/257 (13%)
Query: 67 AVKRFNRSAWPD-ARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLAK 124
A+KR A D R F E + +L + + NLLG C L EY P+ L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 125 HLFH---WETQP-----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170
L ET P + L A +A ++Y + K+ ++ DL A I+
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNIL 164
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL 224
++ +++ FGL SR Y P E L T S ++S+G LL
Sbjct: 165 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 225 LDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+++S P + ++ Q LE + D+ E+ L +C + +P ERP
Sbjct: 222 WEIVSLGGTPYCGMTCAELYEKLPQGYR---LEKPLNCDD--EVYDLMRQCWREKPYERP 276
Query: 284 NPRSLVTALVTLQKDTE 300
S LV+L + E
Sbjct: 277 ---SFAQILVSLNRMLE 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNLAFTPPEYLRTGRVTPES 215
+Y DL I+ D++ + +L+ FGL K S D S+ + + PE + T +
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 216 VMYSFGTLLLDLLSG 230
+SFG L+ ++L+G
Sbjct: 208 DWWSFGVLMFEMLTG 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 35/257 (13%)
Query: 67 AVKRFNRSAWPD-ARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLAK 124
A+KR A D R F E + +L + + NLLG C L EY P+ L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 125 HLFH---WETQP-----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170
L ET P + L A +A ++Y + K+ ++ DL A I+
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNIL 174
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL 224
++ +++ FGL SR Y P E L T S ++S+G LL
Sbjct: 175 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 225 LDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+++S P + ++ Q LE + D+ E+ L +C + +P ERP
Sbjct: 232 WEIVSLGGTPYCGMTCAELYEKLPQGYR---LEKPLNCDD--EVYDLMRQCWREKPYERP 286
Query: 284 NPRSLVTALVTLQKDTE 300
S LV+L + E
Sbjct: 287 ---SFAQILVSLNRMLE 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 36/252 (14%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK SA R+ + E + + L N + NLLG C G L++ EY L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 124 KHL-------FHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L +T P + L + +A+ + + SK ++ DL A
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAAR 190
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
I+ ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 191 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 250
Query: 222 TLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG-TELVRLASRCLQY 277
L +L S G P +D + I+ EG S + E+ + C
Sbjct: 251 IFLWELFSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDA 303
Query: 278 EPRERPNPRSLV 289
+P +RP + +V
Sbjct: 304 DPLKRPTFKQIV 315
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 113/284 (39%), Gaps = 33/284 (11%)
Query: 28 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEA 86
I+ L + G + + GEK + +A+K + P A ++ L+EA
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKV-----------KIPVAIKELREATSPKANKEILDEA 75
Query: 87 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRV 142
+ + N + LLG C + L+ + MP D + +H + +Q + L
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFT 201
+ IA+ + Y + R ++ DL A ++ + +++ FGL K + + Y
Sbjct: 130 CVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 202 PPEYLRTGRV-----TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256
P +++ + T +S ++S+G + +L++ P D I I ++ +
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGER 244
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
++ + +C + RP R L+ + +D +
Sbjct: 245 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 288
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 36/252 (14%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK SA R+ + E + + L N + NLLG C G L++ EY L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 124 KHL-------FHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L +T P + L + +A+ + + SK ++ DL A
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAAR 192
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
I+ ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 193 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 252
Query: 222 TLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG-TELVRLASRCLQY 277
L +L S G P +D + I+ EG S + E+ + C
Sbjct: 253 IFLWELFSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDA 305
Query: 278 EPRERPNPRSLV 289
+P +RP + +V
Sbjct: 306 DPLKRPTFKQIV 317
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 36/252 (14%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK SA R+ + E + + L N + NLLG C G L++ EY L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 124 KHL-------FHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L +T P + L + +A+ + + SK ++ DL A
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAAR 174
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
I+ ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 234
Query: 222 TLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG-TELVRLASRCLQY 277
L +L S G P +D + I+ EG S + E+ + C
Sbjct: 235 IFLWELFSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDA 287
Query: 278 EPRERPNPRSLV 289
+P +RP + +V
Sbjct: 288 DPLKRPTFKQIV 299
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-HWETQPMKWAM 138
++ E R + L + + L LV EY + +L H + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---YS 195
+ R I A++YC K ++ DL A ++ D D+N +++ FG G +
Sbjct: 118 KFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC 173
Query: 196 TNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC 254
+ + PE + + PE ++S G +L L+SG S D +N++ L +
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERV 225
Query: 255 LEGQF 259
L G++
Sbjct: 226 LRGKY 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 113/284 (39%), Gaps = 33/284 (11%)
Query: 28 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEA 86
I+ L + G + + GEK + +A+K + P A ++ L+EA
Sbjct: 20 IKVLSSGAFGTVYKGLWIPEGEKV-----------KIPVAIKELREATSPKANKEILDEA 68
Query: 87 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRV 142
+ + N + LLG C + L+ + MP D + +H + +Q + L
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 122
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFT 201
+ IA+ + Y + R ++ DL A ++ + +++ FGL K + + Y
Sbjct: 123 CVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 202 PPEYLRTGRV-----TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256
P +++ + T +S ++S+G + +L++ P D I I ++ +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGER 237
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
++ + +C + RP R L+ + +D +
Sbjct: 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 281
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E R + R+ L L D V EY L FH + + R R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 252
Query: 143 -ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTN 197
I AL+Y S++ +Y DL ++ D D + +++ FGL K +DG +++
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 312
Query: 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL-- 255
+ PE L + G ++ +++ G+ +P +++ + L + L
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LP-------FYNQDHEKLFELILME 364
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRER 282
E +F G E L S L+ +P++R
Sbjct: 365 EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 36/252 (14%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK SA R+ + E + + L N + NLLG C G L++ EY L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 124 KHL-------FHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L +T P + L + +A+ + + SK ++ DL A
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAAR 197
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
I+ ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 198 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
Query: 222 TLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG-TELVRLASRCLQY 277
L +L S G P +D + I+ EG S + E+ + C
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDA 310
Query: 278 EPRERPNPRSLV 289
+P +RP + +V
Sbjct: 311 DPLKRPTFKQIV 322
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 114/284 (40%), Gaps = 33/284 (11%)
Query: 28 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEA 86
I+ L + G + + GEK + +A+K + P A ++ L+EA
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKV-----------KIPVAIKELREATSPKANKEILDEA 75
Query: 87 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRV 142
+ + N + LLG C +L++ + MP D + +H + +Q + L
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFT 201
+ IA+ + Y + R ++ DL A ++ + +++ FGL K + + Y
Sbjct: 130 CVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 202 PPEYLRTGRV-----TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256
P +++ + T +S ++S+G + +L++ P D I I ++ +
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGER 244
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
++ + +C + RP R L+ + +D +
Sbjct: 245 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 288
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 16/228 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKFSLDLAS 112
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ +L FGL + D Y +
Sbjct: 113 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 227
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ L L ++C Y+P RP L L T+ ++ ++
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E R + R+ L L D V EY L FH + + R R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 255
Query: 143 -ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTN 197
I AL+Y S++ +Y DL ++ D D + +++ FGL K +DG +++
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 315
Query: 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL-- 255
+ PE L + G ++ +++ G+ +P +++ + L + L
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LP-------FYNQDHEKLFELILME 367
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRER 282
E +F G E L S L+ +P++R
Sbjct: 368 EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 36/252 (14%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK SA R+ + E + + L N + NLLG C G L++ EY L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 124 KHL-------FHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L +T P + L + +A+ + + SK ++ DL A
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAAR 197
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 221
I+ ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 198 NILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
Query: 222 TLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG-TELVRLASRCLQY 277
L +L S G P +D + I+ EG S + E+ + C
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDA 310
Query: 278 EPRERPNPRSLV 289
+P +RP + +V
Sbjct: 311 DPLKRPTFKQIV 322
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 66 IAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
+AVK +++ + ++ E R L + + L LV EY +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVF 101
Query: 124 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L H + + + R I A++YC K ++ DL A ++ D D N +++ F
Sbjct: 102 DYLVAHGRXKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADXNIKIADF 157
Query: 183 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHA 238
G G P PE + + PE ++S G +L L+SG S
Sbjct: 158 GFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 212
Query: 239 LDLIRDRNIQTLTDSCLEGQF 259
D +N++ L + L G++
Sbjct: 213 FD---GQNLKELRERVLRGKY 230
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKFSLDLAS 492
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ +L FGL + D Y +
Sbjct: 493 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 607
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L L ++C Y+P RP L L T+
Sbjct: 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 18/207 (8%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E R + R+ L L D V EY L FH + + R R
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 113
Query: 143 -ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTN 197
I AL+Y S++ +Y DL ++ D D + +++ FGL K +DG + +
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 173
Query: 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL-- 255
+ PE L + G ++ +++ G+ +P +++ + L + L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LP-------FYNQDHEKLFELILME 225
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRER 282
E +F G E L S L+ +P++R
Sbjct: 226 EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 18/207 (8%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E R + R+ L L D V EY L FH + + R R
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 112
Query: 143 -ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTN 197
I AL+Y S++ +Y DL ++ D D + +++ FGL K +DG + +
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 172
Query: 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL-- 255
+ PE L + G ++ +++ G+ +P +++ + L + L
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LP-------FYNQDHEKLFELILME 224
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRER 282
E +F G E L S L+ +P++R
Sbjct: 225 EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 19/224 (8%)
Query: 84 EEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVA 143
+EA+ L++ + L G C + LV E+ L + L P + + A
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWA 111
Query: 144 LHIAEALEYCTSKERA--LYHDLNAYRIVFDDDVNP--------RLSCFGLMK--NSRDG 191
+ IA + Y + ++ DL + I+ V +++ FGL + +
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 251
S + A+ PE +R + S ++S+G LL +LL+G+ P +D + +
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV--PFRGIDGLAVAYGVAMN 229
Query: 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
L + E +L C +P RP+ +++ L T+
Sbjct: 230 KLALPIPSTCPE--PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 18/207 (8%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
L E R + R+ L L D V EY L FH + + R R
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 114
Query: 143 -ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTN 197
I AL+Y S++ +Y DL ++ D D + +++ FGL K +DG + +
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 174
Query: 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL-- 255
+ PE L + G ++ +++ G+ +P +++ + L + L
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LP-------FYNQDHEKLFELILME 226
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRER 282
E +F G E L S L+ +P++R
Sbjct: 227 EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 30/149 (20%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA--VGQLRNRRLANLLGCCCEGDER-- 110
VYKG L+ + +AVK F ++ + + F+ E V + + +A + GDER
Sbjct: 29 VYKGSLDER-PVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFI----VGDERVT 80
Query: 111 -------LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------- 156
LLV EY PN +L K+L W R+A + L Y ++
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 157 ERALYH-DLNAYRIVFDDDVNPRLSCFGL 184
+ A+ H DLN+ ++ +D +S FGL
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR--------LRVALH 145
+ NLLG C + G +++ E+ L+ +L + P K + + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 146 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LA 199
+A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y L
Sbjct: 153 VAKGMEFLASR-KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258
+ PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR-----M 266
Query: 259 FSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 267 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 143
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FG K + + Y P +++ +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 259
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 260 VKCWMIDADSRPKFRELIIEFSKMARDPQ 288
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FG K + + Y P +++ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 252
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 253 VKCWMIDADSRPKFRELIIEFSKMARDPQ 281
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 86 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FG K + + Y P +++ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 255 RKCWMIDADSRPKFRELIIEFSKMARDPQ 283
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FG K + + Y P +++ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 255 VKCWMIDADSRPKFRELIIEFSKMARDPQ 283
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 102/257 (39%), Gaps = 35/257 (13%)
Query: 67 AVKRFNRSAWPD-ARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEYMPNDTLAK 124
A+KR A D R F E + +L + + NLLG C L EY P+ L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 125 HLFH---WETQP-----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170
L ET P + L A +A ++Y + K+ ++ +L A I+
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRNLAARNIL 171
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL 224
++ +++ FGL SR Y P E L T S ++S+G LL
Sbjct: 172 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 225 LDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+++S P + ++ Q LE + D+ E+ L +C + +P ERP
Sbjct: 229 WEIVSLGGTPYCGMTCAELYEKLPQGYR---LEKPLNCDD--EVYDLMRQCWREKPYERP 283
Query: 284 NPRSLVTALVTLQKDTE 300
S LV+L + E
Sbjct: 284 ---SFAQILVSLNRMLE 297
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FG K + + Y P +++ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 255 RKCWMIDADSRPKFRELIIEFSKMARDPQ 283
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 110/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+K + P A ++ L+EA + + N + LL
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C +L++ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 140
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FG K + + Y P +++ +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 256
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 257 VKCWMIDADSRPKFRELIIEFSKMARDPQ 285
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 16/228 (7%)
Query: 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA--KHLFHWETQPMKWAM 138
+FL+EA + Q + + L+G E ++ M TL + + A
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWII----MELCTLGELRSFLQVRKFSLDLAS 112
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN- 197
+ A ++ AL Y SK R ++ D+ A ++ + +L FGL + D +
Sbjct: 113 LILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIEN 227
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ L L ++C Y+P RP L L T+ ++ ++
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 88 AVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIA 147
A+G L + + LLG C G LV +Y+P +L H+ + + L + IA
Sbjct: 68 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIA 125
Query: 148 EALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFG---LMKNSRDGRSYS---TNLAF 200
+ + Y +E + H +L A ++ +++ FG L+ YS T + +
Sbjct: 126 KGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
E + G+ T +S ++S+G + +L++
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 88 AVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIA 147
A+G L + + LLG C G LV +Y+P +L H+ + + L + IA
Sbjct: 86 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIA 143
Query: 148 EALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFG---LMKNSRDGRSYS---TNLAF 200
+ + Y +E + H +L A ++ +++ FG L+ YS T + +
Sbjct: 144 KGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
E + G+ T +S ++S+G + +L++
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 27/269 (10%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG + + +A+ + P A ++ L+EA + + N + LL
Sbjct: 58 GSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLL 117
Query: 102 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157
G C + L+ + MP D + +H + +Q + L + IA+ + Y +
Sbjct: 118 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 170
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 211
R ++ DL A ++ + +++ FGL K + + Y P +++ +
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
T +S ++S+G + +L++ P D I I ++ + ++ +
Sbjct: 231 THQSDVWSYGVTVWELMTFGSKP----YDGIPASEISSILEKGERLPQPPICTIDVYMIM 286
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+C + RP R L+ + +D +
Sbjct: 287 VKCWMIDADSRPKFRELIIEFSKMARDPQ 315
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 97 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 156
L L C D V EY+ L H+ + K + A IA L + SK
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDG---RSYSTNLAFTPPEYLRTGRVT 212
+Y DL ++ D + + +++ FG+ K N DG + + + PE +
Sbjct: 462 -GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 520
Query: 213 PESVMYSFGTLLLDLLSGK 231
++FG LL ++L+G+
Sbjct: 521 KSVDWWAFGVLLYEMLAGQ 539
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 97 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 156
L L C D V EY+ L H+ + K + A IA L + SK
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDG---RSYSTNLAFTPPEYLRTGRVT 212
+Y DL ++ D + + +++ FG+ K N DG + + + PE +
Sbjct: 141 -GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 199
Query: 213 PESVMYSFGTLLLDLLSGK 231
++FG LL ++L+G+
Sbjct: 200 KSVDWWAFGVLLYEMLAGQ 218
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 35.4 bits (80), Expect = 0.064, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 418
G ++ K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ A
Sbjct: 16 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 74
Query: 419 LNDASQA 425
LNDA++A
Sbjct: 75 LNDATRA 81
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 202
A + ALEY SK+ +Y DL I+ D + + +++ FG K D + L TP
Sbjct: 112 AAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTP 167
Query: 203 ----PEYLRTGRVTPESVMYSFGTLLLDLLSG 230
PE + T +SFG L+ ++L+G
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 132 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191
+P+ + + +A +E+ +S+ + ++ DL A I+ ++ ++ FGL ++
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 192 RSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRD 244
Y L + PE + + +S ++S+G LL ++ S P P +D
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD---- 308
Query: 245 RNIQTLTDSCLEG------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ EG ++S+ E+ ++ C +P+ERP LV L L
Sbjct: 309 ---EDFCSRLREGMRMRAPEYST---PEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 18/165 (10%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLAKHLFHW----ETQPMKWAMR 139
E R + L L C + +RL V EY+ L H+ E Q + +A
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDG---RSYS 195
+ + L + K +Y DL ++ D + + +++ FG+ K + DG R +
Sbjct: 129 ISIGL-------FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC 181
Query: 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD 240
+ PE + +++G LL ++L+G+ PP D
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ--PPFDGED 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR--------LRVALH 145
+ NLLG C + G +++ E+ L+ +L + P K + + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 146 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LA 199
+A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y L
Sbjct: 153 VAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258
+ PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-----M 266
Query: 259 FSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 267 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 29/183 (15%)
Query: 141 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF 200
++A+ I +ALE+ SK ++ D+ ++ + ++ FG+ D + + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 201 TPPEYLRTGRVTPE---------SVMYSFGTLLLDL------LSGKHIPPSHALDLIRDR 245
P Y+ R+ PE S ++S G +++L P ++ +
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN-PRSLVTALVTLQ--KDTEVP 302
+ Q D +FS+ E V S+CL+ +ERP P + TL K T+V
Sbjct: 275 SPQLPAD-----KFSA----EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVA 325
Query: 303 SHV 305
S V
Sbjct: 326 SFV 328
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 144 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 198 --LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-- 260
Query: 255 LEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 261 ---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 144 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 198 --LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-- 260
Query: 255 LEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 261 ---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 153 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 198 --LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-- 269
Query: 255 LEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 270 ---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVA 143
E Q N L C + + RL V EY+ L H+ P + A R A
Sbjct: 102 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-RFYSA 160
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDGRSYSTNLA--- 199
I+ AL Y + +Y DL ++ D + + +L+ +G+ K R G + ST
Sbjct: 161 -EISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 218
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE LR ++ G L+ ++++G+
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 190 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 198 --LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-- 306
Query: 255 LEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 307 ---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 155 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 198 --LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-- 271
Query: 255 LEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 272 ---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNLAFTPPEYLRTGRVTPES 215
+Y DL I+ D++ + +L+ FGL K + D S+ + + PE + + +
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSA 211
Query: 216 VMYSFGTLLLDLLSG 230
+S+G L+ ++L+G
Sbjct: 212 DWWSYGVLMFEMLTG 226
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 145 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-- 202
I LE+ + +Y DL ++ DDD N R+S GL + G++ + A TP
Sbjct: 297 QIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 203 --PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE L ++ G L ++++ +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 71/182 (39%), Gaps = 42/182 (23%)
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 202
A IA AL Y S +Y DL I+ D + L+ FGL K + + S ++ TP
Sbjct: 145 AAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP 203
Query: 203 ----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258
PE L + G +L ++L G +PP ++ RN + D+ L
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYS------RNTAEMYDNIL--- 252
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD-----------TEVPSHVLM 307
++ LQ +P + R L+ L LQKD E+ SHV
Sbjct: 253 -------------NKPLQLKPNITNSARHLLEGL--LQKDRTKRLGAKDDFMEIKSHVFF 297
Query: 308 GI 309
+
Sbjct: 298 SL 299
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 145 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-- 202
I LE+ + +Y DL ++ DDD N R+S GL + G++ + A TP
Sbjct: 297 QIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 203 --PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE L ++ G L ++++ +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 145 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-- 202
I LE+ + +Y DL ++ DDD N R+S GL + G++ + A TP
Sbjct: 297 QIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 203 --PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE L ++ G L ++++ +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 145 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-- 202
I LE+ + +Y DL ++ DDD N R+S GL + G++ + A TP
Sbjct: 297 QIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGF 355
Query: 203 --PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE L ++ G L ++++ +
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN----- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 197 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 198 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 255
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--- 312
Query: 256 EGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 313 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN----- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 206 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 198 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 255
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--- 321
Query: 256 EGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 322 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 16/209 (7%)
Query: 29 ETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA 88
E L T G+ + I + GE+ V K Q R + NR W Q +++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQ---VAIK-----QCRQELSPKNRERWCLEIQIMKKLNH 72
Query: 89 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH-IA 147
+ R + + L D LL EY L K+L +E +R L I+
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 148 EALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDGR---SYSTNLAFT 201
AL Y + R ++ DL IV + ++ G K G + L +
Sbjct: 133 SALRYL-HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSG 230
PE L + T +SFGTL + ++G
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN----- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 199 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 198 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 255
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--- 314
Query: 256 EGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 315 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN----- 197
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ Y
Sbjct: 204 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 198 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 255
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--- 319
Query: 256 EGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 320 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 16/209 (7%)
Query: 29 ETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA 88
E L T G+ + I + GE+ V K Q R + NR W Q +++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQ---VAIK-----QCRQELSPKNRERWCLEIQIMKKLNH 71
Query: 89 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH-IA 147
+ R + + L D LL EY L K+L +E +R L I+
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 148 EALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDGR---SYSTNLAFT 201
AL Y + R ++ DL IV + ++ G K G + L +
Sbjct: 132 SALRYL-HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSG 230
PE L + T +SFGTL + ++G
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 25/139 (17%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR------ 210
++ DL I+ DD++ RLS FG + G R + PE L+
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
Query: 211 VTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEG--QFSS----DE 263
E +++ G +L LL+G PP H ++ R I +EG QFSS D
Sbjct: 282 YGKEVDLWACGVILFTLLAGS--PPFWHRRQILMLRMI-------MEGQYQFSSPEWDDR 332
Query: 264 GTELVRLASRCLQYEPRER 282
+ + L SR LQ +P R
Sbjct: 333 SSTVKDLISRLLQVDPEAR 351
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 29/183 (15%)
Query: 141 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF 200
++A+ I +ALE+ SK ++ D+ ++ + ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 201 TPPEYLRTGRVTPE---------SVMYSFGTLLLDL------LSGKHIPPSHALDLIRDR 245
P Y+ R+ PE S ++S G +++L P ++ +
Sbjct: 173 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN-PRSLVTALVTLQ--KDTEVP 302
+ Q D +FS+ E V S+CL+ +ERP P + TL K T+V
Sbjct: 231 SPQLPAD-----KFSA----EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVA 281
Query: 303 SHV 305
S V
Sbjct: 282 SFV 284
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 24/207 (11%)
Query: 48 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ +VY G+ L NQ RIA+K ++ EE L+++ + LG E
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRL--RVALHIAEALEYCTSKE---RALY 161
+ E +P +L+ L + P+K + I E L+Y + R +
Sbjct: 91 NGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 162 HD---LNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNLAFTPPEYLRTG--RVT 212
D +N Y V ++S FG K +++ L + PE + G
Sbjct: 150 GDNVLINTYSGVL------KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 213 PESVMYSFGTLLLDLLSGKHIPPSHAL 239
+ ++S G ++++ +GK PP + L
Sbjct: 204 KAADIWSLGCTIIEMATGK--PPFYEL 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 48 GEKAPNVVYKGKLENQFRI-AVKRFNRSAWPDARQF----LEEARAVGQLRNRRLANLLG 102
GE + +V K + ++ RI A+K+F S D + + E + + QLR+ L NLL
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 103 CCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
C + LV E++ + L LF + + + + I + +C S ++
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHS-HNIIH 147
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLA---FTPPEYLRTGRVTPESV- 216
D+ I+ +L FG + + G Y +A + PE L ++V
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVD 207
Query: 217 MYSFGTLLLDLLSGKHIPPS 236
+++ G L+ ++ G+ + P
Sbjct: 208 VWAIGCLVTEMFMGEPLFPG 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESV 216
+Y DL I+ D+ + R+S GL + + +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 217 -MYSFGTLLLDLLSGKHIP-------PSHALDLIRDRNIQTLTD-------SCLEGQFSS 261
+S G +L LL G H P H +D + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297
D L L R Q E +E P RSL +V LQK
Sbjct: 432 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 465
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESV 216
+Y DL I+ D+ + R+S GL + + +++ + PE L+ G S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 217 -MYSFGTLLLDLLSGKHIP-------PSHALDLIRDRNIQTLTD-------SCLEGQFSS 261
+S G +L LL G H P H +D + L D S LEG
Sbjct: 372 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 430
Query: 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297
D L L R Q E +E P RSL +V LQK
Sbjct: 431 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 464
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESV 216
+Y DL I+ D+ + R+S GL + + +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 217 -MYSFGTLLLDLLSGKHIP-------PSHALDLIRDRNIQTLTD-------SCLEGQFSS 261
+S G +L LL G H P H +D + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297
D L L R Q E +E P RSL +V LQK
Sbjct: 432 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 465
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESV 216
+Y DL I+ D+ + R+S GL + + +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 217 -MYSFGTLLLDLLSGKHIP-------PSHALDLIRDRNIQTLTD-------SCLEGQFSS 261
+S G +L LL G H P H +D + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297
D L L R Q E +E P RSL +V LQK
Sbjct: 432 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 465
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 31/223 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-------SRDGRSY 194
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ R G +
Sbjct: 144 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA- 201
Query: 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR- 260
Query: 254 CLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 261 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR------------LRVA 143
+ NLLG C + G +++ E+ L+ +L + + + + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-------SRDGRSYST 196
+A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ R G +
Sbjct: 155 FQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RL 212
Query: 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 255
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--- 269
Query: 256 EGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 270 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 31/223 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-------SRDGRSY 194
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ R G +
Sbjct: 144 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA- 201
Query: 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR- 260
Query: 254 CLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 261 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 114
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG +++
Sbjct: 115 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG +++
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVA 143
E Q N L C + + RL V EY+ L H+ P + A R A
Sbjct: 70 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-RFYSA 128
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP- 202
I+ AL Y + +Y DL ++ D + + +L+ +G+ K ++ TP
Sbjct: 129 -EISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 186
Query: 203 ---PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE LR ++ G L+ ++++G+
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 31/223 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-------SRDGRSY 194
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ R G +
Sbjct: 153 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA- 210
Query: 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR- 269
Query: 254 CLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 270 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYST 196
+R L + AL K ++ DL I+ DDD+N +L+ FG G RS
Sbjct: 130 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
Query: 197 NLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQT 249
++ PE + E M+S G ++ LL+G PP H ++ R I
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMI-- 241
Query: 250 LTDSCLEGQFSSDEGTELVR-LASRCLQYEPRER 282
++ + G D+ ++ V+ L SR L +P++R
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 24/207 (11%)
Query: 48 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ +VY G+ L NQ RIA+K ++ EE L+++ + LG E
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 76
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRL--RVALHIAEALEYCTSKE---RALY 161
+ E +P +L+ L + P+K + I E L+Y + R +
Sbjct: 77 NGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 162 HD---LNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNLAFTPPEYLRTG--RVT 212
D +N Y V ++S FG K +++ L + PE + G
Sbjct: 136 GDNVLINTYSGVL------KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 213 PESVMYSFGTLLLDLLSGKHIPPSHAL 239
+ ++S G ++++ +GK PP + L
Sbjct: 190 KAADIWSLGCTIIEMATGK--PPFYEL 214
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 418
G ++ K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ A
Sbjct: 1 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 59
Query: 419 LNDASQA 425
L DA++A
Sbjct: 60 LGDATRA 66
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 31/223 (13%)
Query: 97 LANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMR------------LR 141
+ NLLG C + G +++ E+ L+ +L + P K A +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-------SRDGRSY 194
+ +A+ +E+ S+ + ++ DL A I+ + ++ FGL ++ R G +
Sbjct: 153 YSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA- 210
Query: 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253
L + PE + T +S ++SFG LL ++ S G P +D R ++ T
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR- 269
Query: 254 CLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ D T E+ + C EP +RP LV L L
Sbjct: 270 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVA 143
E Q N L C + + RL V EY+ L H+ P + A R A
Sbjct: 59 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-RFYSA 117
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP- 202
I+ AL Y + +Y DL ++ D + + +L+ +G+ K ++ TP
Sbjct: 118 -EISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 175
Query: 203 ---PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE LR ++ G L+ ++++G+
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVA 143
E Q N L C + + RL V EY+ L H+ P + A R A
Sbjct: 55 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-RFYSA 113
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP- 202
I+ AL Y + +Y DL ++ D + + +L+ +G+ K ++ TP
Sbjct: 114 -EISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 171
Query: 203 ---PEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
PE LR ++ G L+ ++++G+
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG +++
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 97/250 (38%), Gaps = 41/250 (16%)
Query: 62 NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
N +I++K S + D F E + + ++N G DE ++ EYM ND+
Sbjct: 77 NNDKISIK----SKYDD---FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 122 LAKHLFHWETQPMKWAMRLRVAL------HIAEALEYCTSKERALYHDLNAYRIVFDDDV 175
+ K ++ + + + + + + Y +++ + D+ I+ D +
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG 189
Query: 176 NPRLSCFG---LMKNSRDGRSYSTNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSG 230
+LS FG M + + S T F PPE+ + + ++S G L +
Sbjct: 190 RVKLSDFGESEYMVDKKIKGSRGT-YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN 248
Query: 231 KHIPPSHALDL------IRDRNIQ------------TLTDSCLEGQFSSDEGTELVRLAS 272
+P S + L IR +NI+ T S F S+E + ++L
Sbjct: 249 -VVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLF- 306
Query: 273 RCLQYEPRER 282
L+ P ER
Sbjct: 307 --LRKNPAER 314
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGL-MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 212
R ++ DL + +DD++ ++ FGL K DG T L TP PE L +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHS 220
Query: 213 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
E ++S G +L LL GK P +++ I+ + + + + L+R
Sbjct: 221 FEVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVPRHINPVASALIR--- 274
Query: 273 RCLQYEPRERPNPRSLVT 290
R L +P RP+ L+T
Sbjct: 275 RMLHADPTLRPSVAELLT 292
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 32/255 (12%)
Query: 66 IAVKRFNRSA-WPDARQFLEEARAVGQLRNR-RLANLLGCCCE-GDERLLVAEYMPNDTL 122
+AVK A + R + E + + + + + NLLG C + G +++ E+ L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 123 AKHLFHWETQ--PMKWAMRLR-----------VALHIAEALEYCTSKERALYHDLNAYRI 169
+ +L + P K L + +A+ +E+ S+ + ++ DL A I
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNI 179
Query: 170 VFDDDVNPRLSCFGLMKN-------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 222
+ + ++ FGL ++ R G + L + PE + T +S ++SFG
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 223 LLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT-ELVRLASRCLQYEPR 280
LL ++ S G P +D R ++ T + D T E+ + C EP
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-----MRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 281 ERPNPRSLVTALVTL 295
+RP LV L L
Sbjct: 294 QRPTFSELVEHLGNL 308
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 418
G ++ K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 66
Query: 419 LNDASQA 425
L DA++A
Sbjct: 67 LGDATRA 73
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 116
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG + +
Sbjct: 117 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTP 213
R ++ DL + +DD++ ++ FGL +L TP PE L +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 214 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273
E ++S G +L LL GK P +++ I+ + + + + L+R R
Sbjct: 222 EVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVPRHINPVASALIR---R 275
Query: 274 CLQYEPRERPNPRSLVT 290
L +P RP+ L+T
Sbjct: 276 MLHADPTLRPSVAELLT 292
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG + +
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG + +
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 9/152 (5%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV-A 143
E+R + R+ L L D V EY L FH + + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLA 199
I ALEY S++ +Y D+ ++ D D + +++ FGL K DG + +
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLAFTPPEYLRTGRVTPES 215
+Y DL I+ + + +L+ FGL K S DG ++ + + PE L
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAV 202
Query: 216 VMYSFGTLLLDLLSGKHIPP 235
+S G L+ D+L+G PP
Sbjct: 203 DWWSLGALMYDMLTGA--PP 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTP 213
R ++ DL + +DD++ ++ FGL +L TP PE L +
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 214 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273
E ++S G +L LL GK P +++ I+ + + + + L+R R
Sbjct: 206 EVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVPRHINPVASALIR---R 259
Query: 274 CLQYEPRERPNPRSLVT 290
L +P RP+ L+T
Sbjct: 260 MLHADPTLRPSVAELLT 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 24/174 (13%)
Query: 124 KHLFHWETQPMKWAMRLRVAL-HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
K + E Q + W +++ +AL H+ + + L+ D+ + I D +L F
Sbjct: 118 KGVLFQEDQILDWFVQICLALKHVHD--------RKILHRDIKSQNIFLTKDGTVQLGDF 169
Query: 183 GLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA 238
G+ + + TP PE +S +++ G +L +L + KH + +
Sbjct: 170 GIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
Query: 239 LDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLV 289
+ + L + G F S +L L S+ + PR+RP+ S++
Sbjct: 230 M--------KNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYST 196
+R L + AL K ++ DL I+ DDD+N +L+ FG G R
Sbjct: 117 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 172
Query: 197 NLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQT 249
++ PE + E M+S G ++ LL+G PP H ++ R I
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMI-- 228
Query: 250 LTDSCLEGQFSSDEGTELVR-LASRCLQYEPRER 282
++ + G D+ ++ V+ L SR L +P++R
Sbjct: 229 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 262
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTP 213
R ++ DL + +DD++ ++ FGL L TP PE L +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 214 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273
E ++S G +L LL GK P +++ I+ + + + + L+R R
Sbjct: 222 EVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVPRHINPVASALIR---R 275
Query: 274 CLQYEPRERPNPRSLVT 290
L +P RP+ L+T
Sbjct: 276 MLHADPTLRPSVAELLT 292
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYST 196
+R L + AL K ++ DL I+ DDD+N +L+ FG G R
Sbjct: 130 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 197 NLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQT 249
++ PE + E M+S G ++ LL+G PP H ++ R I
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMI-- 241
Query: 250 LTDSCLEGQFSSDEGTELVR-LASRCLQYEPRER 282
++ + G D+ ++ V+ L SR L +P++R
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 146 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC--FGLMKNSRDGRSYSTNLAFTPP 203
+ EAL++ S + D+ I++ + + FG + + G ++ L FT P
Sbjct: 111 VCEALQFLHSHNIGHF-DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--RLLFTAP 167
Query: 204 EYL-----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258
EY + V+ + M+S GTL+ LLSG I P + + N Q + ++ + +
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG--INP-----FLAETN-QQIIENIMNAE 219
Query: 259 FSSDE------GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 311
++ DE E + R L E + R + QK V + V+ + H
Sbjct: 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKH 278
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
+V EY+ TL + + H E PM + V +AL + S + + H D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNF--SHQNGIIHRDVKPANIM 148
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLA-------FTPPEYLRTGRVTPESVMYSFGTL 223
++ FG+ + D + T A + PE R V S +YS G +
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 224 LLDLLSGKHIPP 235
L ++L+G+ PP
Sbjct: 209 LYEVLTGE--PP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
+V EY+ TL + + H E PM + V +AL + S + + H D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNF--SHQNGIIHRDVKPANIM 148
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLA-------FTPPEYLRTGRVTPESVMYSFGTL 223
++ FG+ + D + T A + PE R V S +YS G +
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 224 LLDLLSGKHIPP 235
L ++L+G+ PP
Sbjct: 209 LYEVLTGE--PP 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDG---RSYSTNLAFTPPEYLRTGRVTPES 215
+Y DL I+ + + +L+ FGL K S DG + + + PE L
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAV 202
Query: 216 VMYSFGTLLLDLLSGKHIPP 235
+S G L+ D+L+G PP
Sbjct: 203 DWWSLGALMYDMLTGA--PP 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
+V EY+ TL + + H E PM + V +AL + + + ++ D+ I+
Sbjct: 110 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNF-SHQNGIIHRDVKPANIMI 166
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLA-------FTPPEYLRTGRVTPESVMYSFGTLL 224
++ FG+ + D + T A + PE R V S +YS G +L
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 225 LDLLSGKHIPP 235
++L+G+ PP
Sbjct: 227 YEVLTGE--PP 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
+V EY+ TL + + H E PM + V +AL + S + + H D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNF--SHQNGIIHRDVKPANIM 148
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLA-------FTPPEYLRTGRVTPESVMYSFGTL 223
++ FG+ + D + T A + PE R V S +YS G +
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 224 LLDLLSGKHIPP 235
L ++L+G+ PP
Sbjct: 209 LYEVLTGE--PP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
+V EY+ TL + + H E PM + V +AL + S + + H D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNF--SHQNGIIHRDVKPANIM 148
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLA-------FTPPEYLRTGRVTPESVMYSFGTL 223
++ FG+ + D + T A + PE R V S +YS G +
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 224 LLDLLSGKHIPP 235
L ++L+G+ PP
Sbjct: 209 LYEVLTGE--PP 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
+V EY+ TL + + H E PM + V +AL + S + + H D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNF--SHQNGIIHRDVKPANIL 148
Query: 171 FDDDVNPRLSCFGLMKNSRD-GRSYSTNLA------FTPPEYLRTGRVTPESVMYSFGTL 223
++ FG+ + D G S A + PE R V S +YS G +
Sbjct: 149 ISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 224 LLDLLSGKHIPP 235
L ++L+G+ PP
Sbjct: 209 LYEVLTGE--PP 218
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From
Methicillin Resistant Staphylococcus Aureus
pdb|4EWT|C Chain C, The Crystal Structure Of A Putative Aminohydrolase From
Methicillin Resistant Staphylococcus Aureus
pdb|4EWT|D Chain D, The Crystal Structure Of A Putative Aminohydrolase From
Methicillin Resistant Staphylococcus Aureus
pdb|4EWT|B Chain B, The Crystal Structure Of A Putative Aminohydrolase From
Methicillin Resistant Staphylococcus Aureus
Length = 392
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 1 MCELVCGFAENEEKPGVDNVPVFCEYSIETLRTATSGFAME 41
M + C N++ P + N P F EY +TL+ A F +E
Sbjct: 284 MYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEANLDFGVE 324
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRL-- 140
++E + QL + + E +E +V E L++ + H++ Q R
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 141 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF 200
+ + + ALE+ S+ R ++ D+ + +L GL + + + +L
Sbjct: 140 KYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 201 TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256
TP PE + +S ++S G LL ++ + + P + D + ++ + C
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS--PFYG-DKMNLYSLCKKIEQCDY 255
Query: 257 GQFSSDEGTELVR-LASRCLQYEPRERPN 284
SD +E +R L + C+ +P +RP+
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPD 284
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,073,752
Number of Sequences: 62578
Number of extensions: 518585
Number of successful extensions: 1561
Number of sequences better than 100.0: 404
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 405
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)