BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012122
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IYG|Z Chain Z, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 517
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/465 (58%), Positives = 354/465 (76%), Gaps = 8/465 (1%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
MQIQ+PTA +IA+ A AQDDI+GDGTTS V+ IGEL+KQ++ I EG+HPR++ +GFE A
Sbjct: 59 MQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAA 118
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
K LQFLE+ K + E D+E L VART+LRTK++ LAD LT+ VV+++L I+K
Sbjct: 119 KEKALQFLEQVK----VSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQ 174
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
+E IDLFMVE+M M+HK + DT L+ GLVLDHG+RHPDMK+R E+ YILTCNVSLEYEK+
Sbjct: 175 DEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKT 234
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
EVN+GFFY +AE+RE +V AER+ ++++V++IIELK KVC +D FVVINQKGIDP S
Sbjct: 235 EVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSL 294
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGC-LGWAGLVYEHVLGEEKYT 299
NMERL LACGG A+NS+DDL P C LG AG VYE+ LGEEK+T
Sbjct: 295 DALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFT 353
Query: 300 FVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQY 359
F+E NP S T+LIKGPN HT+ QIKDA+RDGLRAVKN I+D VV GAGA EVA +
Sbjct: 354 FIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEA 413
Query: 360 LVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNIVGLN 418
LV + K +V+GRAQLGV+AFADALL++PK LA+N+G D Q+ ++ ++ EH + G +VG++
Sbjct: 414 LV-KYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVD 472
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463
++G+P+ GI+DNY VK+Q+++S VIA+ +LLVDE++RAG
Sbjct: 473 LNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 517
>pdb|3P9D|F Chain F, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|N Chain N, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|FF Chain f, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|NN Chain n, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|F Chain F, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|N Chain N, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|FF Chain f, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|NN Chain n, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 546
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 330/480 (68%), Gaps = 11/480 (2%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
MQIQ+PTA++IAR A AQD+I+GDGTT+ V +GEL++Q+ R I EG+HPR++ DGFEIA
Sbjct: 66 MQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIA 125
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
++ +++FL++FK D+E L VAR++L TK+ L + LT IV +AVL +
Sbjct: 126 RKESMKFLDEFKISKT-NLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDA 184
Query: 121 E-EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEK 179
+ + +DL MVE+M M+H DT ++GLVLDHG RHPDM R +N Y+L NVSLEYEK
Sbjct: 185 QADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEK 244
Query: 180 SEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGN-DNNFVVINQKGIDPL 238
+EVN+GFFYS+A+QR+ + A+ER+ VD K+++II+LKN+VC + D FV+INQKGIDP+
Sbjct: 245 TEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPM 304
Query: 239 SXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKY 298
S NMERL L GGEA NSV+DL+P LG++GLVY+ +GEEK+
Sbjct: 305 SLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKF 364
Query: 299 TFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQ 358
T+V +P SCTILIKG + +AQ KDAVRDGLRAV N ++D+ ++ GAGAF +A +
Sbjct: 365 TYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSR 424
Query: 359 YL--VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGE------HD 410
YL N K +G+ + G+EAFA+ALLV+PKTL +N+G D DV+ ++ E D
Sbjct: 425 YLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSD 484
Query: 411 RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKPT 470
VG++ + GD DP +EGI+D+Y V R I IAS LLL DE++RAGR+ K T
Sbjct: 485 ETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLKET 544
>pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|E Chain E, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|F Chain F, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|G Chain G, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|H Chain H, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
Length = 548
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 255/468 (54%), Gaps = 21/468 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+ +Q+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A
Sbjct: 72 IDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALA 131
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ L++ V D D+E L +A T++ K ES + L + V AV + +
Sbjct: 132 AEKAQEILDEIAIRV---DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEK 188
Query: 121 EEA---IDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 177
++ +DL ++ + ++ LV G+V+D HP M +R EN I N +LE
Sbjct: 189 KDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEV 248
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
+K+E +A ++ +Q + + E + + + V I + +G + FV QKGID
Sbjct: 249 KKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQ------TGANVVFV---QKGIDD 299
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
L+ +ME+L A G + V +V DLTP LG+A +V E L E
Sbjct: 300 LAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGEN 359
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVA 355
FVE KNP + TILI+G +H I +++ A+ D ++ VK+ +ED AV+ GA E+A
Sbjct: 360 MIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELA 419
Query: 356 ARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNI 414
R ++E K V G+ L +E FADAL ++PKTLAENAGLDT ++++ + EH +RG
Sbjct: 420 IR---LDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLG 476
Query: 415 VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G++ G P D +GI + VK+Q I S A +L +D+VI A
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA 524
>pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q3Q|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
Length = 548
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 254/468 (54%), Gaps = 21/468 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+ +Q+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP ++ G+ +A
Sbjct: 72 IDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALA 131
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ L++ V D D+E L +A T++ K ES + L + V AV + +
Sbjct: 132 AEKAQEILDEIAIRV---DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEK 188
Query: 121 EEA---IDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 177
++ +DL ++ + ++ LV G+V+D HP M +R EN I N +LE
Sbjct: 189 KDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEV 248
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
+K+E +A ++ +Q + + E + + + V I + +G + FV QKGID
Sbjct: 249 KKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQ------TGANVVFV---QKGIDD 299
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
L+ +ME+L A G + V +V DLTP LG+A +V E L E
Sbjct: 300 LAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGEN 359
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVA 355
FVE KNP + TILI+G +H I +++ A+ D ++ VK+ +ED AV+ GA E+A
Sbjct: 360 MIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELA 419
Query: 356 ARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNI 414
R ++E K V G+ L +E FADAL ++PKTLAENAGLDT ++++ + EH +RG
Sbjct: 420 IR---LDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLG 476
Query: 415 VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G++ G P D +GI + VK+Q I S A +L +D+VI A
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA 524
>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
Length = 548
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 254/468 (54%), Gaps = 21/468 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+ +Q+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP ++ G+ +A
Sbjct: 72 IDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALA 131
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ L++ V D D+E L +A T++ K ES + L + V AV + +
Sbjct: 132 AEKAQEILDEIAIRV---DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEK 188
Query: 121 EEA---IDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 177
++ +DL ++ + ++ LV G+V+D HP M +R EN I N +LE
Sbjct: 189 KDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEV 248
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
+K+E +A ++ +Q + + E + + + V I + +G + FV QKGID
Sbjct: 249 KKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQ------TGANVVFV---QKGIDD 299
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
L+ +ME+L A G + V +V DLTP LG+A +V E L E
Sbjct: 300 LAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGEN 359
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA--FEVA 355
FVE KNP + TILI+G +H I +++ A+ D ++ VK+ +ED AV+ GA E+A
Sbjct: 360 MIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELA 419
Query: 356 ARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGNI 414
R ++E K V G+ L +E FADAL ++PKTLAENAGLDT ++++ + EH +RG
Sbjct: 420 IR---LDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLG 476
Query: 415 VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G++ G P D +GI + VK+Q I S A +L +D+VI A
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA 524
>pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|B Chain B, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|C Chain C, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|D Chain D, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|E Chain E, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|F Chain F, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|G Chain G, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|H Chain H, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|I Chain I, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
Length = 553
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 255/470 (54%), Gaps = 18/470 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +Q+P A ++ + A QD+ + DGT + VIF GEL+K++E + + +HP +++ G++ A
Sbjct: 79 MDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKA 138
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCI--- 117
+ LQ +++ V + D ++L+ +A T+L +K + + DIVV AV +
Sbjct: 139 EEVALQTIQELAQTVSIND---TDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAEL 195
Query: 118 RKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 177
R + +DL ++++ DT+LV G+V+D HP M +R EN I + SLE
Sbjct: 196 RGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEV 255
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
EK E++A ++ Q + + E + EKV +I+ +G + V+I QKGID
Sbjct: 256 EKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKIL------ATGAN---VIICQKGIDE 306
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
++ ++E+L A GG V+++D+++ LG+A L+ E +GE+K
Sbjct: 307 VAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDK 366
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAAR 357
FVE KNP S +ILI+G + + + + A+RD L V + I+D + G GA E+
Sbjct: 367 MVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIA 426
Query: 358 QYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGN--IV 415
+ L + V G+ QL VEA+A+AL + L ENAG D D+++ L+ H+ N
Sbjct: 427 KKL-RKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWY 485
Query: 416 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 465
G++ ++G P+D +G+ + VK I + A+ +L +D+V+ AG+
Sbjct: 486 GIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKK 535
>pdb|1A6D|A Chain A, Thermosome From T. Acidophilum
pdb|1A6E|A Chain A, Thermosome-Mg-Adp-Alf3 Complex
Length = 545
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 243/469 (51%), Gaps = 19/469 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++PTA MI + AQD GDGTT+ V+ GEL+KQ+E +D+G+HP V+ +G+ +A
Sbjct: 71 MDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLA 130
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVV---NAVLCI 117
+ +++ D L+ +A T L K D L D+VV NAV +
Sbjct: 131 VNEARKIIDEIAEK-----STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEV 185
Query: 118 RKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 177
R + +D +++ DT+ + G+V+D H M +N I + +LE
Sbjct: 186 RDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEI 245
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
+K+E+ A S+ + + + E + V +I K N VV+ QKGID
Sbjct: 246 KKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKI-----KKSGAN----VVLCQKGIDD 296
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
++ +ME+L A G + V +DDLTP LG A V E +G+++
Sbjct: 297 VAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDR 356
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAAR 357
TFV KNP + +ILI+G DH +++++ A+ D +R V T ED + G GA E
Sbjct: 357 MTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELA 416
Query: 358 QYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI-VG 416
L + +V GR QL +EAFA AL ++P+TLAENAG+D + +I LK + ++G I VG
Sbjct: 417 MRLA-KYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVG 475
Query: 417 LNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 465
++ + D + +G+ D VK + S +A+ +L +D+VI + ++
Sbjct: 476 VDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKS 524
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|B Chain B, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|C Chain C, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|D Chain D, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|E Chain E, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|F Chain F, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|G Chain G, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|H Chain H, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|I Chain I, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|J Chain J, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|K Chain K, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|L Chain L, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|M Chain M, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|N Chain N, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|O Chain O, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|P Chain P, Atomic Model Of Mm-Cpn In The Closed State
pdb|3KFB|A Chain A, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|B Chain B, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|C Chain C, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|D Chain D, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|E Chain E, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|F Chain F, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|G Chain G, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|H Chain H, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3RUQ|A Chain A, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|B Chain B, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|C Chain C, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|D Chain D, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
Length = 543
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 235/464 (50%), Gaps = 15/464 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 68 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 127
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 128 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 184
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E +++
Sbjct: 185 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKET 244
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E +A ++ + + E + + + V I K N V+ QKGID L+
Sbjct: 245 ETDAEIRITDPAKLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQ 295
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ DL+ LG AGLV E + + F
Sbjct: 296 HYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIF 355
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 356 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 415
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 416 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 474
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 475 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp
pdb|3IZH|B Chain B, Mm-Cpn D386a With Atp
pdb|3IZH|C Chain C, Mm-Cpn D386a With Atp
pdb|3IZH|D Chain D, Mm-Cpn D386a With Atp
pdb|3IZH|E Chain E, Mm-Cpn D386a With Atp
pdb|3IZH|F Chain F, Mm-Cpn D386a With Atp
pdb|3IZH|G Chain G, Mm-Cpn D386a With Atp
pdb|3IZH|H Chain H, Mm-Cpn D386a With Atp
pdb|3IZH|I Chain I, Mm-Cpn D386a With Atp
pdb|3IZH|J Chain J, Mm-Cpn D386a With Atp
pdb|3IZH|K Chain K, Mm-Cpn D386a With Atp
pdb|3IZH|L Chain L, Mm-Cpn D386a With Atp
pdb|3IZH|M Chain M, Mm-Cpn D386a With Atp
pdb|3IZH|N Chain N, Mm-Cpn D386a With Atp
pdb|3IZH|O Chain O, Mm-Cpn D386a With Atp
pdb|3IZH|P Chain P, Mm-Cpn D386a With Atp
pdb|3IZM|A Chain A, Mm-Cpn Wildtype With Atp
pdb|3IZM|B Chain B, Mm-Cpn Wildtype With Atp
pdb|3IZM|C Chain C, Mm-Cpn Wildtype With Atp
pdb|3IZM|D Chain D, Mm-Cpn Wildtype With Atp
pdb|3IZM|E Chain E, Mm-Cpn Wildtype With Atp
pdb|3IZM|F Chain F, Mm-Cpn Wildtype With Atp
pdb|3IZM|G Chain G, Mm-Cpn Wildtype With Atp
pdb|3IZM|H Chain H, Mm-Cpn Wildtype With Atp
pdb|3IZM|I Chain I, Mm-Cpn Wildtype With Atp
pdb|3IZM|J Chain J, Mm-Cpn Wildtype With Atp
pdb|3IZM|K Chain K, Mm-Cpn Wildtype With Atp
pdb|3IZM|L Chain L, Mm-Cpn Wildtype With Atp
pdb|3IZM|M Chain M, Mm-Cpn Wildtype With Atp
pdb|3IZM|N Chain N, Mm-Cpn Wildtype With Atp
pdb|3IZM|O Chain O, Mm-Cpn Wildtype With Atp
pdb|3IZM|P Chain P, Mm-Cpn Wildtype With Atp
Length = 513
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 235/464 (50%), Gaps = 15/464 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 62 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 121
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 122 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 178
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E +++
Sbjct: 179 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKET 238
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E +A ++ + + E + + + V I K N V+ QKGID L+
Sbjct: 239 ETDAEIRITDPAKLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQ 289
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ DL+ LG AGLV E + + F
Sbjct: 290 HYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIF 349
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 350 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 409
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 410 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 468
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 469 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 512
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUV|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUW|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
Length = 543
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 234/464 (50%), Gaps = 15/464 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 68 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 127
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 128 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 184
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E +++
Sbjct: 185 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKET 244
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E +A ++ + + E + + + V I K N V+ QKGID L+
Sbjct: 245 ETDAEIRITDPAKLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQ 295
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ L+ LG AGLV E + + F
Sbjct: 296 HYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIF 355
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 356 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 415
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 416 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 474
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 475 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp
pdb|3IZI|B Chain B, Mm-Cpn Rls With Atp
pdb|3IZI|C Chain C, Mm-Cpn Rls With Atp
pdb|3IZI|D Chain D, Mm-Cpn Rls With Atp
pdb|3IZI|E Chain E, Mm-Cpn Rls With Atp
pdb|3IZI|F Chain F, Mm-Cpn Rls With Atp
pdb|3IZI|G Chain G, Mm-Cpn Rls With Atp
pdb|3IZI|H Chain H, Mm-Cpn Rls With Atp
pdb|3IZI|I Chain I, Mm-Cpn Rls With Atp
pdb|3IZI|J Chain J, Mm-Cpn Rls With Atp
pdb|3IZI|K Chain K, Mm-Cpn Rls With Atp
pdb|3IZI|L Chain L, Mm-Cpn Rls With Atp
pdb|3IZI|M Chain M, Mm-Cpn Rls With Atp
pdb|3IZI|N Chain N, Mm-Cpn Rls With Atp
pdb|3IZI|O Chain O, Mm-Cpn Rls With Atp
pdb|3IZI|P Chain P, Mm-Cpn Rls With Atp
pdb|3IZJ|A Chain A, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|B Chain B, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|C Chain C, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|D Chain D, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|E Chain E, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|F Chain F, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|G Chain G, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|H Chain H, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|I Chain I, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|J Chain J, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|K Chain K, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|L Chain L, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|M Chain M, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|N Chain N, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|O Chain O, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|P Chain P, Mm-Cpn Rls With Atp And Alfx
Length = 513
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 234/464 (50%), Gaps = 15/464 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 62 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 121
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 122 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 178
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E +++
Sbjct: 179 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKET 238
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E +A ++ + + E + + + V I K N V+ QKGID L+
Sbjct: 239 ETDAEIRITDPAKLMEFIEQEEKMLKDMVAEI-----KASGAN----VLFCQKGIDDLAQ 289
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ L+ LG AGLV E + + F
Sbjct: 290 HYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIF 349
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 350 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 409
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 410 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 468
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 469 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 512
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From
Methanococcoides Burtonii
Length = 500
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 238/466 (51%), Gaps = 20/466 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M IQ+P A MI + QD GDGTT+ + GEL+ ++E I +G+H ++ +G+ A
Sbjct: 22 MDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHA 81
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEI-LKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK 119
+ LE + PD E L +A T + K E+ ++L+ + V AV I +
Sbjct: 82 AEKCREILETITIAI----SPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVE 137
Query: 120 PEE-AIDLFMVELMHMRHKFDV---DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSL 175
EE + + ++E + + + D+ L++GLV+D HP+M + EN IL + +
Sbjct: 138 EEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPV 197
Query: 176 EYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI 235
E+ K+EV++ ++ Q + + E + + E ++I SG + VV QKGI
Sbjct: 198 EFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVI------ASGAN---VVFCQKGI 248
Query: 236 DPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGE 295
D ++ +++RL G + +D +T +G AGLV E +
Sbjct: 249 DDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRG 308
Query: 296 EKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVA 355
K T+V +N + T+L+ G +H + + A+ D L V IED VV+G G+ EV
Sbjct: 309 GKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVE 368
Query: 356 ARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI- 414
L +E T++GR QL V FA+AL V+P LAENAGLD D+++ L+ +H++GN
Sbjct: 369 LSLRL-SEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKN 427
Query: 415 VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460
GLN ++G+ +D + + +K Q IN+ +L +D+V+
Sbjct: 428 AGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVV 473
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp
pdb|3IZN|B Chain B, Mm-Cpn Deltalid With Atp
pdb|3IZN|C Chain C, Mm-Cpn Deltalid With Atp
pdb|3IZN|D Chain D, Mm-Cpn Deltalid With Atp
pdb|3IZN|E Chain E, Mm-Cpn Deltalid With Atp
pdb|3IZN|F Chain F, Mm-Cpn Deltalid With Atp
pdb|3IZN|G Chain G, Mm-Cpn Deltalid With Atp
pdb|3IZN|H Chain H, Mm-Cpn Deltalid With Atp
pdb|3IZN|I Chain I, Mm-Cpn Deltalid With Atp
pdb|3IZN|J Chain J, Mm-Cpn Deltalid With Atp
pdb|3IZN|K Chain K, Mm-Cpn Deltalid With Atp
pdb|3IZN|L Chain L, Mm-Cpn Deltalid With Atp
pdb|3IZN|M Chain M, Mm-Cpn Deltalid With Atp
pdb|3IZN|N Chain N, Mm-Cpn Deltalid With Atp
pdb|3IZN|O Chain O, Mm-Cpn Deltalid With Atp
pdb|3IZN|P Chain P, Mm-Cpn Deltalid With Atp
pdb|3J03|A Chain A, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|B Chain B, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|C Chain C, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|D Chain D, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|E Chain E, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|F Chain F, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|G Chain G, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|H Chain H, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|I Chain I, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|J Chain J, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|K Chain K, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|L Chain L, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|M Chain M, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|N Chain N, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|O Chain O, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|P Chain P, Lidless Mm-Cpn In The Closed State With AtpALFX
Length = 491
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 230/464 (49%), Gaps = 37/464 (7%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 62 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 121
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 122 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 178
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E S
Sbjct: 179 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETAS 238
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E+ + MVA E+K SG + V+ QKGID L+
Sbjct: 239 EM-----------LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQ 267
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ DL+ LG AGLV E + + F
Sbjct: 268 HYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIF 327
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 328 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 387
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 388 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 446
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 447 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 490
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|B Chain B, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|C Chain C, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|D Chain D, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|E Chain E, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|F Chain F, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|G Chain G, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|H Chain H, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|I Chain I, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|J Chain J, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|K Chain K, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|L Chain L, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|M Chain M, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|N Chain N, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|O Chain O, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|P Chain P, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3KFE|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|E Chain E, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|F Chain F, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|G Chain G, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|H Chain H, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
Length = 521
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 230/464 (49%), Gaps = 37/464 (7%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 68 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 127
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 128 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 184
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E S
Sbjct: 185 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETAS 244
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E+ + MVA E+K SG + V+ QKGID L+
Sbjct: 245 EM-----------LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQ 273
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ DL+ LG AGLV E + + F
Sbjct: 274 HYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIF 333
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 334 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 393
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 394 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 452
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 453 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 496
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|B Chain B, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|C Chain C, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|D Chain D, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|E Chain E, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|F Chain F, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|G Chain G, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|H Chain H, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|I Chain I, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|J Chain J, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|K Chain K, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|L Chain L, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|M Chain M, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|N Chain N, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|O Chain O, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|P Chain P, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
Length = 491
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 229/464 (49%), Gaps = 37/464 (7%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 62 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 121
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 122 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 178
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E S
Sbjct: 179 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETAS 238
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E+ + MVA E+K SG + V+ QKGID L+
Sbjct: 239 EM-----------LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQ 267
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ DL+ LG AGLV E + + F
Sbjct: 268 HYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIF 327
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV + V TIED +V G G+ EV L
Sbjct: 328 VEECKHPKAVTMLIRGTTEHVIEEVARAVDAAVGVVGCTIEDGRIVSGGGSTEVELSMKL 387
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 388 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 446
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 447 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 490
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|B Chain B, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|C Chain C, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|D Chain D, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|E Chain E, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|F Chain F, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|G Chain G, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|H Chain H, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|I Chain I, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|J Chain J, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|K Chain K, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|L Chain L, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|M Chain M, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|N Chain N, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|O Chain O, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|P Chain P, Mm-Cpn Rls Deltalid With Atp
pdb|3IZL|A Chain A, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|B Chain B, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|C Chain C, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|D Chain D, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|E Chain E, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|F Chain F, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|G Chain G, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|H Chain H, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|I Chain I, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|J Chain J, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|K Chain K, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|L Chain L, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|M Chain M, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|N Chain N, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|O Chain O, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|P Chain P, Mm-Cpn Rls Deltalid With Atp And Alfx
Length = 491
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 229/464 (49%), Gaps = 37/464 (7%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP ++V G++ A
Sbjct: 62 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAA 121
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L+ V DKEIL +A T++ K E ++L +I+V AV +
Sbjct: 122 AQKAQELLKTIACEV---GAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 178
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
E +D ++++ DT L++G+++D M ++ + I N ++E S
Sbjct: 179 EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETAS 238
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E+ + MVA E+K SG + V+ QKGID L+
Sbjct: 239 EM-----------LKDMVA--------------EIK---ASGAN---VLFCQKGIDDLAQ 267
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
+ME+L A G + ++ L+ LG AGLV E + + F
Sbjct: 268 HYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIF 327
Query: 301 VENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYL 360
VE K+P + T+LI+G +H I ++ AV D + V TIED +V G G+ EV L
Sbjct: 328 VEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 387
Query: 361 VNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH-DRGN-IVGLN 418
E + + GR QL V AFADAL V+P+TLAENAGLD ++++ ++ H GN GLN
Sbjct: 388 -REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLN 446
Query: 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+G D G+ + VK Q I S LL +D+VI A
Sbjct: 447 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 490
>pdb|1A6D|B Chain B, Thermosome From T. Acidophilum
pdb|1A6E|B Chain B, Thermosome-Mg-Adp-Alf3 Complex
Length = 543
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 238/464 (51%), Gaps = 17/464 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M +++P A M+ + QD GDGTT+ VI G L++Q++ I++ +HP V+ +G+ +A
Sbjct: 70 MDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMA 129
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDI---VVNAVLCI 117
+ +++ T + G + +LKM A+T+L +K D+L +I V +V +
Sbjct: 130 SEEAKRVIDEISTKI--GADEKALLLKM-AQTSLNSKSASVAKDKLAEISYEAVKSVAEL 186
Query: 118 RKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEY 177
R + +D ++++ + DT+L+ G+++D HP M ++ I + LE
Sbjct: 187 RDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEI 246
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
+K E + + + +A E + E V +I K N VVI QKGID
Sbjct: 247 KKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKI-----KSVGAN----VVITQKGIDD 297
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
++ +M++L A G V+++D+++ LG A V + +GE+
Sbjct: 298 MAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDY 357
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAAR 357
TFV KNP + +IL++G +H + +++ ++ D L V + +ED A G GA
Sbjct: 358 MTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIA 417
Query: 358 QYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGN-IVG 416
L + +K + GR QL +E FADA+ +P+ LAENAGLD D+++ L+ EH +GN G
Sbjct: 418 FRLRSYAQK-IGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYG 476
Query: 417 LNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460
+N +G+ D G+ + V +Q I S A +L +D+VI
Sbjct: 477 INVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVI 520
>pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|J Chain J, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|BB Chain b, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|JJ Chain j, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|B Chain B, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|J Chain J, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|BB Chain b, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|JJ Chain j, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 527
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 233/469 (49%), Gaps = 29/469 (6%)
Query: 3 IQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEG-MHPRVLVDGFEIAK 61
+ NP A ++ + QDD GDGTTS + EL++++E+ ID+ +HP+ +++G+
Sbjct: 69 LDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGY---- 124
Query: 62 RATLQFLEKFKTPVVMGDEPDKEILK----MVARTTLRTKLYESLADQLTDIVVNAVLCI 117
R T + + DK + + +A+TTL +K+ D ++ NA+L +
Sbjct: 125 RLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRL 184
Query: 118 RKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVL--DHGSRHPDMKRRAENCYILTCNVSL 175
+ + +L ++++ + D+ L EG +L G+ P +R EN IL N +L
Sbjct: 185 KG---STNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQP---KRIENAKILIANTTL 238
Query: 176 EYEKSEVNAGFFYSNAEQREAMV-AAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKG 234
+ +K ++ F ++ + A + AER ++ K+ +I + N F IN++
Sbjct: 239 DTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKF-------GINTF--INRQL 289
Query: 235 IDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG 294
I +ERL L GGE V++ D+ + LG ++ E +LG
Sbjct: 290 IYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLG 349
Query: 295 EEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEV 354
E+ + K +CTI+++G D T+ + + ++ D L + T ++ VLG G E+
Sbjct: 350 EQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEM 409
Query: 355 AARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-N 413
+ + E + ++G+ L VEAFA AL +P LA+NAG D+ +++ L+ G +
Sbjct: 410 VMSKAVDTEA-QNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGIS 468
Query: 414 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
GL+ ++G D + GI ++Y +KR +++S A LL VD +IRA
Sbjct: 469 TSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRA 517
>pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 228/467 (48%), Gaps = 20/467 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+Q+Q+P A + + QD+ GDGTTS +I GE++ +E +++ MHP V++ + A
Sbjct: 58 IQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKA 117
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ L+K PV D +++ + + +++ TK+ + +I ++AV ++
Sbjct: 118 LDDMISTLKKISIPV---DTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFE 174
Query: 121 EEAIDLFMVELMHMRHKFD----VDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLE 176
E ++ K D+ ++ G++++ HP M+R +N I+ + SLE
Sbjct: 175 ENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLE 234
Query: 177 YEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGID 236
Y+K E + E ++ E + + II+LK V VI +KGI
Sbjct: 235 YKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDV---------VITEKGIS 285
Query: 237 PLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGE 295
L+ + R+ ACG V+ ++L +G AGL+ +G+
Sbjct: 286 DLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGD 345
Query: 296 EKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVA 355
E +TF+ K+P +CTIL++G + +++++ ++D ++ +N + D +V G GA E+A
Sbjct: 346 EYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMA 405
Query: 356 ARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGN-- 413
L E K + G Q A A AL V+P+TL +N G T ++ +L+ +H + N
Sbjct: 406 VAHAL-TEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCE 464
Query: 414 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460
G+N +G +D + GI++ +VK Q + A LL +D+++
Sbjct: 465 TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIV 511
>pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 230/470 (48%), Gaps = 20/470 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M + + A ++ + +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A
Sbjct: 59 MDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQA 118
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
R ++ L+K V++ D + E L A+TTL +K+ S Q+ +I VNAVL +
Sbjct: 119 ARIAIEHLDKISDSVLV-DMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADM 177
Query: 121 EEA-IDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEK 179
+ +D ++++ DT+L++G+++D HP M ++ E+ I E K
Sbjct: 178 QRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPK 237
Query: 180 SEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLS 239
+ ++ E +A+ E+ + +E +R+I E +G + + + Q G D +
Sbjct: 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKE------TGAN---LAVCQWGFDDEA 288
Query: 240 XXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG--EEK 297
+E + +A GG V +LT LG+AGLV E G ++K
Sbjct: 289 NHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDK 348
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAAR 357
+E KN + TI I+G N I + K ++ D L ++N I D VV G GA E++
Sbjct: 349 MLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCA 408
Query: 358 QYLVNEVKK--TVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDR--GN 413
+ E K T+E Q + AFADAL V+P LAEN+G++ + ++ +
Sbjct: 409 LAVSQEADKCPTLE---QYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNP 465
Query: 414 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463
+G++ D + + + + K+Q I+ + +L +D++ + G
Sbjct: 466 ALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG 515
>pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|O Chain O, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|GG Chain g, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|OO Chain o, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|G Chain G, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|O Chain O, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|GG Chain g, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|OO Chain o, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 550
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 230/467 (49%), Gaps = 22/467 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+ + +P A + + AQD GDGTTS I GELMK+++ ++EG+ +++ G+ A
Sbjct: 73 LDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKA 132
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
++ + + + +E+L+ ART + +KL + AD + V+AVL + +
Sbjct: 133 VSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRN 192
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMK---RRAENCYILTCNVSLEY 177
+ +D ++ + + ++ + G+ + + ++ N IL+ NV LE
Sbjct: 193 D--LDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELEL 250
Query: 178 EKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237
+ + NA + E +A+V AE + + EK+R++ E +G + +V+++ I
Sbjct: 251 KAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEE------TGAN---IVLSKLPIGD 301
Query: 238 LSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEK 297
L+ +M R++ A GG ++ D+ P LG L E +G E+
Sbjct: 302 LATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSER 361
Query: 298 YTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAAR 357
Y + +CT+L++G + IA+++ ++ D + VK ++++ +V G GA E+
Sbjct: 362 YNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVS 421
Query: 358 QYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG----N 413
+ L + KT+ G+ Q+ + AFA AL V+P+ L ENAG D +++ L+ H +G
Sbjct: 422 KCL-RDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYG 480
Query: 414 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460
+V ++ GD + +++ VK +NS + +L VDE I
Sbjct: 481 VVFETENIGDNF---AKFVWEPALVKINALNSATEATNLILSVDETI 524
>pdb|3IYG|A Chain A, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 529
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 233/482 (48%), Gaps = 35/482 (7%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A
Sbjct: 59 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 118
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIR-- 118
+ ++++ + ++ DE ++ L A+T++ +K+ D ++VV+AVL I+
Sbjct: 119 CKEAVRYIS--ENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYT 176
Query: 119 ----KPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVS 174
+P ++ V H R + ++ L+ G L+ M +R N I + S
Sbjct: 177 DIRGQPRYPVNSINVLKAHGRSQM--ESMLINGYALNCVVGSQGMPKRIVNAKIACLDFS 234
Query: 175 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKG 234
L+ K ++ ++ E+ + + E E++++I+ +G + V++ G
Sbjct: 235 LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKIL------ATGAN---VILTTGG 285
Query: 235 IDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDL------TPGCLGWAGLV 288
ID + +++R+ A G ++++ +L LG A V
Sbjct: 286 IDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEV 345
Query: 289 YEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLG 348
+ + +++ ++N K S +++++G ND +++ ++ D L VK +E ++VV G
Sbjct: 346 VQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPG 405
Query: 349 AGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGE 408
GA E A YL N ++ R QL + FA +LLV+P TLA NA D+ D++ L+
Sbjct: 406 GGAVEAALSIYLEN-YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAF 464
Query: 409 HDRGNI---------VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEV 459
H+ + +GL+ +G P D + G+F+ VK + + A +L +D++
Sbjct: 465 HNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDL 524
Query: 460 IR 461
I+
Sbjct: 525 IK 526
>pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 229/469 (48%), Gaps = 18/469 (3%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+ + +P A + A +QD GDGTTS + E +KQ + ++EG+HP++++ F A
Sbjct: 60 LDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 119
Query: 61 KRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK 119
+ + +++ V D+ + +++L+ A T L +KL +VV+AV+ +
Sbjct: 120 TQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMML-- 177
Query: 120 PEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMK---RRAENCYILTCNVSLE 176
++ + L M+ + ++ +++LV G+ + + ++ N I NV LE
Sbjct: 178 -DDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELE 236
Query: 177 YEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGID 236
+ + NA E +A+V AE + +K+ +I KV V+++ I
Sbjct: 237 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKV---------VLSKLPIG 287
Query: 237 PLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEE 296
++ +++R ++ACGG SV+ L+ LG + E +G E
Sbjct: 288 DVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGE 347
Query: 297 KYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAA 356
+Y F +CTI+++G + + + + ++ D + V+ I++++VV G GA E+
Sbjct: 348 RYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMEL 407
Query: 357 RQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI-V 415
+YL + +T+ G+ QL + A+A AL ++P+ L +NAG D +++ L+ H +G +
Sbjct: 408 SKYL-RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWY 466
Query: 416 GLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 464
G++ ++ D D +++ V+ + + A ++ VDE I+ R
Sbjct: 467 GVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPR 515
>pdb|3IYG|B Chain B, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
pdb|3KTT|B Chain B, Atomic Model Of Bovine Tric Cct2(Beta) Subunit Derived
From A 4.0 Angstrom Cryo-Em Map
pdb|4A0O|A Chain A, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|B Chain B, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|C Chain C, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|D Chain D, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|E Chain E, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|F Chain F, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|G Chain G, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|H Chain H, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|I Chain I, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|J Chain J, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|K Chain K, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|L Chain L, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|M Chain M, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|N Chain N, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|O Chain O, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|P Chain P, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0V|A Chain A, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|B Chain B, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|C Chain C, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|D Chain D, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|E Chain E, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|F Chain F, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|G Chain G, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|H Chain H, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|I Chain I, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|J Chain J, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|K Chain K, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|L Chain L, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|M Chain M, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|N Chain N, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|O Chain O, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|P Chain P, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0W|A Chain A, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|B Chain B, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|C Chain C, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|D Chain D, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|E Chain E, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|F Chain F, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|G Chain G, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|H Chain H, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|I Chain I, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|J Chain J, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|K Chain K, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|L Chain L, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|M Chain M, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|N Chain N, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|O Chain O, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|P Chain P, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A13|A Chain A, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|B Chain B, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|C Chain C, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|D Chain D, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|E Chain E, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|F Chain F, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|G Chain G, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|H Chain H, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|I Chain I, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|J Chain J, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|K Chain K, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|L Chain L, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|M Chain M, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|N Chain N, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|O Chain O, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|P Chain P, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
Length = 513
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 225/469 (47%), Gaps = 30/469 (6%)
Query: 3 IQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKR 62
+ NP A ++ + QDD GDGTTS + EL++++E I + +HP+ ++ G+ A +
Sbjct: 63 VDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATK 122
Query: 63 ATLQFLEKFKTPVVMGDEPDK--EILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
A Q L + V G + K + L +A TTL +KL D T + V AVL ++
Sbjct: 123 AARQAL--LNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 180
Query: 121 EEAIDLFMVELMHMRHKFD---VDTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSL 175
+E +H+ K D+ L EG +LD G P +R EN IL N +
Sbjct: 181 GN------LEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQP---KRIENAKILIANTGM 231
Query: 176 EYEKSEVNAGFFYSNAEQREAMVA-AERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKG 234
+ +K ++ ++ + A + AE+ ++ EKV RI LK+ + N F IN++
Sbjct: 232 DTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERI--LKHGI-----NCF--INRQL 282
Query: 235 IDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLG 294
I +ERL L GGE ++ D LG L+ E ++G
Sbjct: 283 IYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIG 342
Query: 295 EEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEV 354
E+K V +CTI+++G + + + ++ D L + T++D V G G E+
Sbjct: 343 EDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEM 402
Query: 355 AARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG-N 413
+ V ++ G+ + +E++A AL ++P +A+NAG D+ D++ L+ H G
Sbjct: 403 -LMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKT 461
Query: 414 IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
GL+ G D + GI +++ VKRQ++ S A +L VD +I+A
Sbjct: 462 TAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKA 510
>pdb|3P9D|A Chain A, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|I Chain I, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|AA Chain a, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|II Chain i, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|A Chain A, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|I Chain I, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|AA Chain a, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|II Chain i, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 559
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 201/421 (47%), Gaps = 24/421 (5%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+ +Q+P ++ A QD GDGTTS VI EL+K++ + +HP ++ GF +A
Sbjct: 73 LDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVA 132
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIR-- 118
R ++F+ + + V D KE L +A+T++ +K+ + +D +++VV+A+L ++
Sbjct: 133 LREAIRFINEVLSTSV--DTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQ 190
Query: 119 --KPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR--AENCYILTCNVS 174
K E + V ++ K ++ LV G L+ M +R N I +++
Sbjct: 191 NSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLN 250
Query: 175 LEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKG 234
L+ + + + EQ E + E V E+V++II+ + VV+ KG
Sbjct: 251 LQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQ---------VVLTTKG 301
Query: 235 IDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDL------TPGCLGWAGLV 288
ID L ++ R+ A G V+S+ +L LG V
Sbjct: 302 IDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEV 361
Query: 289 YEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLG 348
+ +++ ++ S +I+++G ND+++ +++ ++ D L VK T+E VV G
Sbjct: 362 VQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPG 421
Query: 349 AGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGE 408
G E A YL N TV R QL + FA ALL++PKTLA NA D+ +++ L+
Sbjct: 422 GGCVEAALNIYLDN-FATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSY 480
Query: 409 H 409
H
Sbjct: 481 H 481
>pdb|3P9D|E Chain E, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|M Chain M, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|EE Chain e, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|MM Chain m, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|E Chain E, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|M Chain M, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|EE Chain e, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|MM Chain m, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 562
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 214/479 (44%), Gaps = 26/479 (5%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGF-EI 59
M++ N A ++ + + +QDD GDGTT V+ L+ Q+ I +G+HP + +GF E
Sbjct: 94 MELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEA 153
Query: 60 AKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVL-CIR 118
AK A + E DE ++ L A+T+L +K+ D+ ++ V AV+ +
Sbjct: 154 AKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMD 213
Query: 119 KPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKR--------RAENCYILT 170
K + +D ++++ D++L+ G++LD HP M + ILT
Sbjct: 214 KDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILT 273
Query: 171 CNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVI 230
C E K + S+ E+ + + E+ +K + +I+ K +G D VVI
Sbjct: 274 C--PFEPPKPKTKHKLDISSVEEYQKLQTYEQ----DKFKEMIDDVKK--AGAD---VVI 322
Query: 231 NQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYE 290
Q G D + +E + ++ G V DL+ LG +YE
Sbjct: 323 CQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYE 382
Query: 291 HVLG--EEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLG 348
G +++ +E K + T ++G N + + + A+ D L V+N ++D VV G
Sbjct: 383 QEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYG 442
Query: 349 AGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGE 408
GA EV + E K G Q FA AL +P TLAEN+GLD + LK +
Sbjct: 443 GGAAEVTMSLAVSEEADKQ-RGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSK 501
Query: 409 HDRGNI--VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 465
+ I +G++ D + + D + K+Q I + +L +D VI +G++
Sbjct: 502 QLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560
>pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 518
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 201/434 (46%), Gaps = 28/434 (6%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
MQ+ +P A M+ + AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A
Sbjct: 60 MQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKA 119
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
++ L PV + D+E L A T+L +K+ + L+ + V+AV+ + P
Sbjct: 120 LEKGIEILTDMSRPVELS---DRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDP 176
Query: 121 EEA--IDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYE 178
A +DL ++++ D LVEGLVL + + R E I L
Sbjct: 177 ATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGIT-RVEKAKIGLIQFCLSAP 235
Query: 179 KSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI--D 236
K++++ S+ Q + ++ ER + V++I K C+ V++ QK I D
Sbjct: 236 KTDMDNQIVVSDYVQMDRVLREERAYILNLVKQI---KKTGCN------VLLIQKSILRD 286
Query: 237 PLSXXXXXXXXXXXXXXXXXXNMERLVLAC---GGEAVNSVDDLTPGCLGWAGLVYEHVL 293
LS E + C G + V VD T LG A L E L
Sbjct: 287 ALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSL 346
Query: 294 -GEEKYTFVENVKNP-HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGA 351
G K + +P + TI+++G N I + + ++ D L ++ ++ A++ G GA
Sbjct: 347 NGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGA 406
Query: 352 --FEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEH 409
E+A R + E +T+ G + AFADA+ V+P TLAENAGL+ + L+ H
Sbjct: 407 PEIELALR---LTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRH 463
Query: 410 DRG-NIVGLNQHSG 422
+G G+N G
Sbjct: 464 AQGEKTTGINVRKG 477
>pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|K Chain K, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|CC Chain c, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|KK Chain k, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|C Chain C, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|K Chain K, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|CC Chain c, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|KK Chain k, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 590
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 228/533 (42%), Gaps = 82/533 (15%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQ-SERCIDEGMHPRVLVDGFEI 59
+ + +P A + + QD+ GDGTT+ +I GE++ Q + I++ +HP +++ +
Sbjct: 68 IDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKK 127
Query: 60 AKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK 119
A L+ +++ PV D + +K + + ++ TK ++++ ++ ++AV +RK
Sbjct: 128 ALTDALEVIKQVSKPV---DVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRK 184
Query: 120 ---------PEEAIDLFMVELMHMRHKFDV-DTRLVEGLVLDHGSRHPDMKRRAENCYIL 169
P ID+ + DV D+R+++G++L+ HP M R EN ++
Sbjct: 185 DLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVV 244
Query: 170 TCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVV 229
+ LEY+K E E ++ E QV +I+ ++ + V
Sbjct: 245 LLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTL---------V 295
Query: 230 INQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLT----------- 278
I +KG+ L+ + R+ G VN V+DL
Sbjct: 296 ITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLF 355
Query: 279 ------------------PGC-LGWAGLVYEHVLGEEKY--TFV---------------- 301
PG GW+ +E G+ ++ F+
Sbjct: 356 KVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGA 415
Query: 302 ---------ENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAF 352
+ + +CTI+++G + + +I ++D + +N + ++ G GA
Sbjct: 416 LGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGAT 475
Query: 353 EVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRG 412
E+A L + K+ +EG Q +A ADA+ +P+TL +NAG D ++ L+ +H +G
Sbjct: 476 EMAVSVKLAEKAKQ-LEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG 534
Query: 413 NI-VGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 464
N G++ G +D GI++ +K+Q + + A LL VD+++ R
Sbjct: 535 NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVR 587
>pdb|3P9D|D Chain D, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|L Chain L, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|DD Chain d, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|LL Chain l, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|D Chain D, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|L Chain L, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|DD Chain d, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|LL Chain l, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 528
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 210/472 (44%), Gaps = 32/472 (6%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
M I +P A M+ + AQD +GDGTTS VI G L+ +ER +++G+HP ++ D F+ A
Sbjct: 68 MAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSA 127
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIR-K 119
+ ++ L + V + D+E L A T+L +K+ + L + V++VL I +
Sbjct: 128 AKRSVDILLEMCHKVSLS---DREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDE 184
Query: 120 PEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGS-RHPDMKRRAENCYILTCNVSLEYE 178
+ +DL + L+ DT +++G+VL + + R E I +
Sbjct: 185 NSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPP 244
Query: 179 KSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI--- 235
K + ++ Q + ++ ER + L V++ QK I
Sbjct: 245 KPDTENNIIVNDYRQMDKILKEERAYL---------LNICKKIKKAKCNVLLIQKSILRD 295
Query: 236 --DPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVL 293
+ L+ +E L G + + ++ T L A LV E
Sbjct: 296 AVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDS 355
Query: 294 GEEKYTFVENVKNPH---SCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAG 350
K V ++N + + +++I+G N+ I + + ++ D L ++ +++ ++ G G
Sbjct: 356 DGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGG 415
Query: 351 AFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD 410
A E+ + L E +++EG + FA AL V+P TLAENAGL++ V+ L+ +H+
Sbjct: 416 APEIEISRRLSKEA-RSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHE 474
Query: 411 RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
G + D I + G + Y + I+ V S + L E +++
Sbjct: 475 NGEL-------NDGISVRRSGTTNTY--EEHILQPVLVSTSAITLASECVKS 517
>pdb|3P9D|H Chain H, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|P Chain P, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|HH Chain h, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|PP Chain p, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|H Chain H, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|P Chain P, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|HH Chain h, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|PP Chain p, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 568
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 223/492 (45%), Gaps = 58/492 (11%)
Query: 8 AIMIARTAVAQDDIS-GDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQ 66
A+ + A Q I GDGT +I GEL+ SE+ I G+ ++ G+ +A++ TL+
Sbjct: 81 AVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLK 140
Query: 67 FLEKFKTPVVMGDEPDK----EILKMVARTTLRTKLY--ESLADQLTDIVVNAVLCIRKP 120
L++ V+G+ DK E+LKM+ + + +K Y E + +L V+ VL + +
Sbjct: 141 ELDEM----VVGEITDKNDKNELLKMI-KPVISSKKYGSEDILSELVSEAVSHVLPVAQQ 195
Query: 121 EEAIDLFMVELMHMRHKFD---VDTRLVEGLVLDHGSRHPD--MKRRAEN----CYILTC 171
I F V+ + + ++ +++G+V + R P+ +K +E+ + TC
Sbjct: 196 AGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFN---REPEGHVKSLSEDKKHKVAVFTC 252
Query: 172 NVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVIN 231
L+ +E NA++ E +Q+D ++ I ++ + C ++
Sbjct: 253 --PLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVE-C--------IVA 301
Query: 232 QKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEH 291
G+ L+ + RL CG + + TP LG V
Sbjct: 302 GAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTM 361
Query: 292 VLGEEKYTFV--ENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEA--VVL 347
+G ++ T E + + TI+++G + + I+ A+ DG+ AVK ++ ++
Sbjct: 362 EIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLP 421
Query: 348 GAGAFEVAARQYLVNEVKKTVE---GRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIA 404
GAGA E+ L++ + K E G QL ++ FA A VVP+TLAE AGLD +V+
Sbjct: 422 GAGATEIE----LISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPN 477
Query: 405 LKGEH---DRGNIVGLNQHSGDPIDPQM---------EGIFDNYSVKRQIINSGPVIASQ 452
L H + G + + + G ID + E I+D + K+ IN A+
Sbjct: 478 LYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATT 537
Query: 453 LLLVDEVIRAGR 464
+L +D++I A +
Sbjct: 538 VLSIDQIIMAKK 549
>pdb|3IYG|Q Chain Q, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 512
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 196/467 (41%), Gaps = 20/467 (4%)
Query: 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIA 60
+++Q+P A MI + Q+ GDGT ++F G L++ +E + G+ +++G+EIA
Sbjct: 60 LEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIA 119
Query: 61 KRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP 120
+ + L E+ ++ T++ +K Y + L ++ A + I
Sbjct: 120 CKKAHEILPDLVCCSAKNLRDVDEVSSLL-HTSVMSKQYGNEV-FLAKLIAQACVSIFPD 177
Query: 121 EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKS 180
++ + + + + ++ G+V + + + +C + +
Sbjct: 178 SGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEGDVTSVKDAKIAVYSC--PFDGMIT 235
Query: 181 EVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSX 240
E +AE+ E +D +V+ I + +G + VV+ + ++
Sbjct: 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIAD------TGAN---VVVTGGRVADMAL 286
Query: 241 XXXXXXXXXXXXXXXXXNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTF 300
++ RL G A+ ++ +G VY +G+ +
Sbjct: 287 HYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVV 346
Query: 301 VENVKNPHS-CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVA-ARQ 358
++ K + TI+++G D+ + I+ AV DG+ K D+ +V G GA E+ A+Q
Sbjct: 347 FKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQ 406
Query: 359 YLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNI-VGL 417
+ +T G Q ++ FA+A +P+ LAEN+G+ +VI L H GN VGL
Sbjct: 407 --ITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGL 464
Query: 418 NQHSGDPIDPQM--EGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462
+ + P M G+ D Y K I A +L VD++I A
Sbjct: 465 DIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511
>pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GN1|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|E Chain E, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|F Chain F, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|G Chain G, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|H Chain H, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
Length = 178
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 141 DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAA 200
D+ ++ G++++ HP M+R +N I+ + SLEY+K E + E ++
Sbjct: 3 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQM 62
Query: 201 ERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNME 260
E + + II+LK V VI +KGI L+ +
Sbjct: 63 EEEYIHQLCEDIIQLKPDV---------VITEKGISDLAQHYLMRANVTAIRRVRKTDNN 113
Query: 261 RLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPN 318
R+ ACG V+ ++L +G AGL+ +G+E +TF+ + K+P +CTIL++G +
Sbjct: 114 RIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGAS 172
>pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
pdb|1ASX|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
Length = 159
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 145 VEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAER-- 202
+ G+V+D H M +N I + +LE +K+E+ A S+ + + + E
Sbjct: 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNT 60
Query: 203 -RQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNMER 261
+Q+ EK+++ SG + VV+ QKGID ++ +ME+
Sbjct: 61 FKQMVEKIKK---------SGAN---VVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEK 108
Query: 262 LVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN 306
L A G + V +DDLTP LG A V E +G+++ TFV KN
Sbjct: 109 LAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN 153
>pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome
Length = 159
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 147 GLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVD 206
G+++D HP M ++ I + LE +K E + + + +A E +
Sbjct: 3 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLR 62
Query: 207 EKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSXXXXXXXXXXXXXXXXXXNMERLVLAC 266
E V +I K N VVI QKGID ++ +M++L A
Sbjct: 63 EMVDKI-----KSVGAN----VVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKAT 113
Query: 267 GGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN 306
G V+++D+++ LG A V + +GE+ TFV KN
Sbjct: 114 GASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGSKN 153
>pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|B Chain B, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|C Chain C, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|D Chain D, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|E Chain E, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|F Chain F, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|G Chain G, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|H Chain H, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|I Chain I, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|J Chain J, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|K Chain K, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|L Chain L, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|M Chain M, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|N Chain N, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|O Chain O, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|P Chain P, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Q Chain Q, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|R Chain R, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|S Chain S, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|T Chain T, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|U Chain U, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|V Chain V, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|W Chain W, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|X Chain X, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Y Chain Y, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Z Chain Z, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|1 Chain 1, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|2 Chain 2, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
Length = 547
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 124 TAAVEELKALSVP 136
>pdb|3C9V|A Chain A, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|B Chain B, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|C Chain C, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|D Chain D, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|E Chain E, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|F Chain F, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|G Chain G, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|H Chain H, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|I Chain I, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|J Chain J, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|K Chain K, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|L Chain L, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|M Chain M, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|N Chain N, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
Length = 526
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 124 TAAVEELKALSVP 136
>pdb|2YEY|A Chain A, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|B Chain B, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|C Chain C, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|D Chain D, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|E Chain E, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|F Chain F, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|G Chain G, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|H Chain H, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|I Chain I, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|J Chain J, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|K Chain K, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|L Chain L, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|M Chain M, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|N Chain N, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
Length = 524
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 124 TAAVEELKALSVP 136
>pdb|4AAQ|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
Length = 548
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 65 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 124
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 125 TAAVEELKALSVP 137
>pdb|2EU1|A Chain A, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|B Chain B, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|C Chain C, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|D Chain D, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|E Chain E, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|F Chain F, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|G Chain G, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|H Chain H, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|I Chain I, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|J Chain J, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|K Chain K, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|L Chain L, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|M Chain M, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|N Chain N, Crystal Structure Of The Chaperonin Groel-E461k
Length = 548
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 65 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 124
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 125 TAAVEELKALSVP 137
>pdb|1PCQ|A Chain A, Crystal Structure Of Groel-Groes
pdb|1PCQ|B Chain B, Crystal Structure Of Groel-Groes
pdb|1PCQ|C Chain C, Crystal Structure Of Groel-Groes
pdb|1PCQ|D Chain D, Crystal Structure Of Groel-Groes
pdb|1PCQ|E Chain E, Crystal Structure Of Groel-Groes
pdb|1PCQ|F Chain F, Crystal Structure Of Groel-Groes
pdb|1PCQ|G Chain G, Crystal Structure Of Groel-Groes
pdb|1PCQ|H Chain H, Crystal Structure Of Groel-Groes
pdb|1PCQ|I Chain I, Crystal Structure Of Groel-Groes
pdb|1PCQ|J Chain J, Crystal Structure Of Groel-Groes
pdb|1PCQ|K Chain K, Crystal Structure Of Groel-Groes
pdb|1PCQ|L Chain L, Crystal Structure Of Groel-Groes
pdb|1PCQ|M Chain M, Crystal Structure Of Groel-Groes
pdb|1PCQ|N Chain N, Crystal Structure Of Groel-Groes
pdb|1PF9|A Chain A, Groel-Groes-Adp
pdb|1PF9|B Chain B, Groel-Groes-Adp
pdb|1PF9|C Chain C, Groel-Groes-Adp
pdb|1PF9|D Chain D, Groel-Groes-Adp
pdb|1PF9|E Chain E, Groel-Groes-Adp
pdb|1PF9|F Chain F, Groel-Groes-Adp
pdb|1PF9|G Chain G, Groel-Groes-Adp
pdb|1PF9|H Chain H, Groel-Groes-Adp
pdb|1PF9|I Chain I, Groel-Groes-Adp
pdb|1PF9|J Chain J, Groel-Groes-Adp
pdb|1PF9|K Chain K, Groel-Groes-Adp
pdb|1PF9|L Chain L, Groel-Groes-Adp
pdb|1PF9|M Chain M, Groel-Groes-Adp
pdb|1PF9|N Chain N, Groel-Groes-Adp
pdb|1SVT|A Chain A, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|B Chain B, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|C Chain C, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|D Chain D, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|E Chain E, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|F Chain F, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|G Chain G, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|H Chain H, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|I Chain I, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|J Chain J, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|K Chain K, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|L Chain L, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|M Chain M, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|N Chain N, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SX4|A Chain A, Groel-Groes-Adp7
pdb|1SX4|B Chain B, Groel-Groes-Adp7
pdb|1SX4|C Chain C, Groel-Groes-Adp7
pdb|1SX4|D Chain D, Groel-Groes-Adp7
pdb|1SX4|E Chain E, Groel-Groes-Adp7
pdb|1SX4|F Chain F, Groel-Groes-Adp7
pdb|1SX4|G Chain G, Groel-Groes-Adp7
pdb|1SX4|H Chain H, Groel-Groes-Adp7
pdb|1SX4|I Chain I, Groel-Groes-Adp7
pdb|1SX4|J Chain J, Groel-Groes-Adp7
pdb|1SX4|K Chain K, Groel-Groes-Adp7
pdb|1SX4|L Chain L, Groel-Groes-Adp7
pdb|1SX4|M Chain M, Groel-Groes-Adp7
pdb|1SX4|N Chain N, Groel-Groes-Adp7
pdb|2YNJ|A Chain A, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|B Chain B, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|C Chain C, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|D Chain D, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|E Chain E, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|F Chain F, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|G Chain G, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|H Chain H, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|I Chain I, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|J Chain J, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|K Chain K, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|L Chain L, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|M Chain M, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|N Chain N, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
Length = 524
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 124 TAAVEELKALSVP 136
>pdb|1AON|A Chain A, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|B Chain B, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|C Chain C, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|D Chain D, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|E Chain E, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|F Chain F, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|G Chain G, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|H Chain H, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|I Chain I, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|J Chain J, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|K Chain K, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|L Chain L, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|M Chain M, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|N Chain N, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1GRU|A Chain A, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|B Chain B, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|C Chain C, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|D Chain D, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|E Chain E, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|F Chain F, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|G Chain G, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|H Chain H, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|I Chain I, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|J Chain J, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|K Chain K, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|L Chain L, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|M Chain M, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|N Chain N, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1MNF|A Chain A, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|B Chain B, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|C Chain C, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|D Chain D, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|E Chain E, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|F Chain F, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|G Chain G, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|H Chain H, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|I Chain I, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|J Chain J, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|K Chain K, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|L Chain L, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|M Chain M, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|N Chain N, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1XCK|A Chain A, Crystal Structure Of Apo Groel
pdb|1XCK|B Chain B, Crystal Structure Of Apo Groel
pdb|1XCK|C Chain C, Crystal Structure Of Apo Groel
pdb|1XCK|D Chain D, Crystal Structure Of Apo Groel
pdb|1XCK|E Chain E, Crystal Structure Of Apo Groel
pdb|1XCK|F Chain F, Crystal Structure Of Apo Groel
pdb|1XCK|G Chain G, Crystal Structure Of Apo Groel
pdb|1XCK|H Chain H, Crystal Structure Of Apo Groel
pdb|1XCK|I Chain I, Crystal Structure Of Apo Groel
pdb|1XCK|J Chain J, Crystal Structure Of Apo Groel
pdb|1XCK|K Chain K, Crystal Structure Of Apo Groel
pdb|1XCK|L Chain L, Crystal Structure Of Apo Groel
pdb|1XCK|M Chain M, Crystal Structure Of Apo Groel
pdb|1XCK|N Chain N, Crystal Structure Of Apo Groel
pdb|2C7C|A Chain A, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|B Chain B, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|C Chain C, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|D Chain D, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|E Chain E, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|F Chain F, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|G Chain G, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|H Chain H, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|I Chain I, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|J Chain J, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|K Chain K, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|L Chain L, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|M Chain M, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|N Chain N, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7D|A Chain A, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|B Chain B, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|C Chain C, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|D Chain D, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|E Chain E, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|F Chain F, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|G Chain G, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|H Chain H, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|I Chain I, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|J Chain J, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|K Chain K, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|L Chain L, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|M Chain M, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|N Chain N, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2CGT|A Chain A, Groel-Adp-Gp31 Complex
pdb|2CGT|B Chain B, Groel-Adp-Gp31 Complex
pdb|2CGT|C Chain C, Groel-Adp-Gp31 Complex
pdb|2CGT|D Chain D, Groel-Adp-Gp31 Complex
pdb|2CGT|E Chain E, Groel-Adp-Gp31 Complex
pdb|2CGT|F Chain F, Groel-Adp-Gp31 Complex
pdb|2CGT|G Chain G, Groel-Adp-Gp31 Complex
pdb|2CGT|H Chain H, Groel-Adp-Gp31 Complex
pdb|2CGT|I Chain I, Groel-Adp-Gp31 Complex
pdb|2CGT|J Chain J, Groel-Adp-Gp31 Complex
pdb|2CGT|K Chain K, Groel-Adp-Gp31 Complex
pdb|2CGT|L Chain L, Groel-Adp-Gp31 Complex
pdb|2CGT|M Chain M, Groel-Adp-Gp31 Complex
pdb|2CGT|N Chain N, Groel-Adp-Gp31 Complex
pdb|2NWC|A Chain A, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|B Chain B, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|C Chain C, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|D Chain D, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|E Chain E, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|F Chain F, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|G Chain G, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|H Chain H, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|I Chain I, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|J Chain J, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|K Chain K, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|L Chain L, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|M Chain M, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|N Chain N, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|3E76|A Chain A, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|B Chain B, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|C Chain C, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|D Chain D, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|E Chain E, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|F Chain F, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|G Chain G, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|H Chain H, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|I Chain I, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|J Chain J, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|K Chain K, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|L Chain L, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|M Chain M, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|N Chain N, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
Length = 547
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
A ++ L+ P
Sbjct: 124 TAAVEELKALSVP 136
>pdb|1WE3|A Chain A, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|B Chain B, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|C Chain C, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|D Chain D, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|E Chain E, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|F Chain F, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|G Chain G, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|H Chain H, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|I Chain I, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|J Chain J, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|K Chain K, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|L Chain L, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|M Chain M, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|N Chain N, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|AA Chain a, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|BB Chain b, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|CC Chain c, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|DD Chain d, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|EE Chain e, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|FF Chain f, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|GG Chain g, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|HH Chain h, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|II Chain i, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|JJ Chain j, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|KK Chain k, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|LL Chain l, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|MM Chain m, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|NN Chain n, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
Length = 543
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
++N A ++ A +D++GDGTT+ + ++++ + + G +P L G E A
Sbjct: 64 HLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAV 123
Query: 62 RATLQFLEKFKTPV 75
A ++ ++ PV
Sbjct: 124 EAAVEKIKALAIPV 137
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 310 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVE 369
I + + + + K D L A + +E E +V G G + A V E+ K +E
Sbjct: 375 AVIRVGAATETELKEKKHRFEDALNATRAAVE-EGIVPGGGVTLLRAISA-VEELIKKLE 432
Query: 370 GRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQM 429
G G + AL + +AENAG + ++ + E + G N +G+ +D
Sbjct: 433 GDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET-KNPRYGFNAATGEFVDMVE 491
Query: 430 EGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460
GI D V R + + I + +L + V+
Sbjct: 492 AGIVDPAKVTRSALQNAASIGALILTTEAVV 522
>pdb|1IOK|A Chain A, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|B Chain B, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|C Chain C, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|D Chain D, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|E Chain E, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|F Chain F, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|G Chain G, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
Length = 545
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++++ + + GM+P L G ++A
Sbjct: 65 KFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVAT 124
Query: 62 RATLQFLEKFKTPV 75
++ ++ PV
Sbjct: 125 AKVVEAIKSAARPV 138
>pdb|3CAU|A Chain A, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|B Chain B, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|C Chain C, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|D Chain D, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|E Chain E, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|F Chain F, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|G Chain G, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|H Chain H, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|I Chain I, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|J Chain J, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|K Chain K, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|L Chain L, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|M Chain M, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|N Chain N, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
Length = 526
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 124 TVAVEELKALSVP 136
>pdb|1GR5|A Chain A, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|B Chain B, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|C Chain C, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|D Chain D, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|E Chain E, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|F Chain F, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|G Chain G, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|H Chain H, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|I Chain I, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|J Chain J, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|K Chain K, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|L Chain L, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|M Chain M, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|N Chain N, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|2C7E|A Chain A, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|B Chain B, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|C Chain C, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|D Chain D, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|E Chain E, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|F Chain F, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|G Chain G, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|H Chain H, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|I Chain I, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|J Chain J, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|K Chain K, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|L Chain L, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|M Chain M, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|N Chain N, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
Length = 547
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 124 TVAVEELKALSVP 136
>pdb|1OEL|A Chain A, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|B Chain B, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|C Chain C, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|D Chain D, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|E Chain E, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|F Chain F, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|G Chain G, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
Length = 547
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 124 TVAVEELKALSVP 136
>pdb|1SX3|A Chain A, Groel14-(Atpgammas)14
pdb|1SX3|B Chain B, Groel14-(Atpgammas)14
pdb|1SX3|C Chain C, Groel14-(Atpgammas)14
pdb|1SX3|D Chain D, Groel14-(Atpgammas)14
pdb|1SX3|E Chain E, Groel14-(Atpgammas)14
pdb|1SX3|F Chain F, Groel14-(Atpgammas)14
pdb|1SX3|G Chain G, Groel14-(Atpgammas)14
pdb|1SX3|H Chain H, Groel14-(Atpgammas)14
pdb|1SX3|I Chain I, Groel14-(Atpgammas)14
pdb|1SX3|J Chain J, Groel14-(Atpgammas)14
pdb|1SX3|K Chain K, Groel14-(Atpgammas)14
pdb|1SX3|L Chain L, Groel14-(Atpgammas)14
pdb|1SX3|M Chain M, Groel14-(Atpgammas)14
pdb|1SX3|N Chain N, Groel14-(Atpgammas)14
Length = 525
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 124 TVAVEELKALSVP 136
>pdb|1SS8|A Chain A, Groel
pdb|1SS8|B Chain B, Groel
pdb|1SS8|C Chain C, Groel
pdb|1SS8|D Chain D, Groel
pdb|1SS8|E Chain E, Groel
pdb|1SS8|F Chain F, Groel
pdb|1SS8|G Chain G, Groel
Length = 524
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 124 TVAVEELKALSVP 136
>pdb|1KP8|A Chain A, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|B Chain B, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|C Chain C, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|D Chain D, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|E Chain E, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|F Chain F, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|G Chain G, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|H Chain H, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|I Chain I, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|J Chain J, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|K Chain K, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|L Chain L, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|M Chain M, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|N Chain N, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
Length = 547
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 64 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 123
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 124 TVAVEELKALSVP 136
>pdb|1GRL|A Chain A, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|B Chain B, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|C Chain C, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|D Chain D, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|E Chain E, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|F Chain F, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|G Chain G, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
Length = 548
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 2 QIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAK 61
+ +N A M+ A +D +GDGTT+ + ++ + + + GM+P L G + A
Sbjct: 65 KFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAV 124
Query: 62 RATLQFLEKFKTP 74
++ L+ P
Sbjct: 125 TVAVEELKALSVP 137
>pdb|1Z63|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX
With Dsdna
pdb|1Z63|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX
With Dsdna
Length = 500
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 66 QFLEKFKTPVVMGDEPDKEILKMVARTTL--RTKLYESLADQLTDIVVNAVLCIRKPEEA 123
+F KF TP+ GD KE LK + + RTK +++ + L D + V C PE+A
Sbjct: 212 EFKSKFATPIKKGDNXAKEELKAIISPFILRRTKYDKAIINDLPDKIETNVYCNLTPEQA 271
>pdb|1Z6A|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE DOMAIN
Length = 500
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 66 QFLEKFKTPVVMGDEPDKEILKMVARTTL--RTKLYESLADQLTDIVVNAVLCIRKPEEA 123
+F KF TP+ GD KE LK + + RTK +++ + L D + V C PE+A
Sbjct: 212 EFKSKFATPIKKGDNMAKEELKAIISPFILRRTKYDKAIINDLPDKIETNVYCNLTPEQA 271
>pdb|3RTK|A Chain A, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
pdb|3RTK|B Chain B, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
Length = 546
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MQIQNP----TAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 56
+++++P A ++ A DD++GDGTT+ + L+++ R + G +P L G
Sbjct: 59 IELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRG 118
Query: 57 FEIA 60
E A
Sbjct: 119 IEKA 122
>pdb|1SJP|A Chain A, Mycobacterium Tuberculosis Chaperonin60.2
pdb|1SJP|B Chain B, Mycobacterium Tuberculosis Chaperonin60.2
Length = 504
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MQIQNP----TAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 56
+++++P A ++ A DD++GDGTT+ + L+++ R + G +P L G
Sbjct: 17 IELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRG 76
Query: 57 FEIA 60
E A
Sbjct: 77 IEKA 80
>pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2VAR|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
Length = 313
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 268 GEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPND 319
GE + + PG L + +HV G E + V+N SC+++ + ND
Sbjct: 8 GEPLIQFNSFNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGND 59
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,565,609
Number of Sequences: 62578
Number of extensions: 493977
Number of successful extensions: 1438
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1269
Number of HSP's gapped (non-prelim): 77
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)