Query 012122
Match_columns 470
No_of_seqs 128 out of 1500
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:12:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_Z T-complex protein 1 sub 100.0 3E-101 1E-105 806.7 51.2 457 1-463 59-517 (517)
2 3iyg_A T-complex protein 1 sub 100.0 6E-99 2E-103 792.3 52.7 450 1-463 59-528 (529)
3 3iyg_G T-complex protein 1 sub 100.0 1E-98 4E-103 788.1 52.3 450 1-463 58-514 (515)
4 3p9d_F T-complex protein 1 sub 100.0 1E-100 4E-105 808.3 33.8 467 1-469 66-543 (546)
5 3ruv_A Chaperonin, CPN; double 100.0 2.9E-98 1E-102 788.7 49.0 454 1-467 68-523 (543)
6 3iyg_B T-complex protein 1 sub 100.0 2.2E-97 8E-102 777.7 53.4 450 1-464 61-512 (513)
7 3aq1_B Thermosome subunit; gro 100.0 1.1E-98 4E-103 785.3 42.4 454 1-467 22-480 (500)
8 3ko1_A Chaperonin; 9-fold symm 100.0 2.1E-98 7E-103 789.6 43.9 453 1-466 79-536 (553)
9 3iyg_H T-complex protein 1 sub 100.0 3.2E-97 1E-101 776.1 52.0 450 1-463 60-514 (515)
10 1q3q_A Thermosome alpha subuni 100.0 1.5E-97 5E-102 784.0 49.1 454 1-467 72-529 (548)
11 1a6d_B Thermosome (beta subuni 100.0 8E-98 3E-102 786.0 46.3 453 1-466 70-526 (543)
12 3iyg_E T-complex protein 1 sub 100.0 9E-97 3E-101 774.2 53.6 451 1-462 59-514 (515)
13 3iyg_D T-complex protein 1 sub 100.0 1.3E-96 4E-101 772.8 50.4 449 1-463 60-518 (518)
14 3p9d_A T-complex protein 1 sub 100.0 3.3E-97 1E-101 782.2 43.3 456 1-469 73-554 (559)
15 1a6d_A Thermosome (alpha subun 100.0 1.2E-96 4E-101 776.7 44.2 451 1-466 71-525 (545)
16 3p9d_E T-complex protein 1 sub 100.0 3.2E-96 1E-100 775.3 45.2 455 1-465 94-560 (562)
17 3p9d_D T-complex protein 1 sub 100.0 4.9E-97 2E-101 776.9 35.1 450 1-463 68-528 (528)
18 3p9d_G T-complex protein 1 sub 100.0 7.2E-97 2E-101 778.3 34.6 456 1-468 73-532 (550)
19 3p9d_C T-complex protein 1 sub 100.0 6.3E-96 2E-100 772.5 39.5 452 1-465 68-588 (590)
20 3iyg_Q T-complex protein 1 sub 100.0 3.7E-94 1.2E-98 753.9 52.1 447 1-463 60-512 (512)
21 3p9d_H T-complex protein 1 sub 100.0 6E-96 2E-100 774.0 30.2 452 1-466 75-551 (568)
22 3p9d_B T-complex protein 1 sub 100.0 3.4E-95 1.2E-99 764.1 30.7 455 1-469 67-524 (527)
23 1we3_A CPN60(groel); chaperoni 100.0 1.7E-79 5.7E-84 643.9 42.4 406 1-465 59-527 (543)
24 1kp8_A Groel protein; chaperon 100.0 3.8E-79 1.3E-83 640.2 38.8 408 1-469 59-529 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 5.5E-80 1.9E-84 647.1 27.1 408 1-468 60-530 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 2.1E-78 7.3E-83 632.9 33.5 405 1-467 59-525 (546)
27 1gml_A T-complex protein 1 sub 100.0 4.2E-38 1.4E-42 284.1 17.6 173 139-320 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 3.6E-33 1.2E-37 246.8 14.2 154 145-307 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.4 6.8E-13 2.3E-17 117.2 8.0 145 142-334 2-169 (194)
30 1srv_A Protein (groel (HSP60 c 99.4 9.7E-13 3.3E-17 110.9 7.9 121 147-303 1-144 (145)
31 3osx_A 60 kDa chaperonin; alph 99.4 3.3E-12 1.1E-16 113.1 11.0 141 146-334 13-176 (201)
32 2ooa_A E3 ubiquitin-protein li 29.6 93 0.0032 21.0 4.5 35 38-72 13-50 (52)
33 2cos_A Serine/threonine protei 20.7 1.4E+02 0.0049 20.2 4.1 35 41-75 14-52 (54)
34 1o13_A Probable NIFB protein; 20.4 1.5E+02 0.005 24.1 5.3 42 227-269 78-119 (136)
35 3ks4_A Polymerase cofactor VP3 20.2 2.6E+02 0.0089 23.3 6.4 77 320-407 38-126 (184)
No 1
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-101 Score=806.75 Aligned_cols=457 Identities=62% Similarity=1.002 Sum_probs=440.7
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.+++.|++++++++
T Consensus 59 i~v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---- 134 (517)
T 3iyg_Z 59 MQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKE---- 134 (517)
T ss_pred ccCcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCC----
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCCc
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMK 160 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~~ 160 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||++.+.+++..+|+++|+|+|++|++..||++++|++|++++.+|+||
T Consensus 135 ~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~ 214 (517)
T 3iyg_Z 135 MDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMK 214 (517)
T ss_pred CCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCcc
Confidence 27889999999999999999999999999999999998754578999999999999999999999999999999999999
Q ss_pred cccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCHHHH
Q 012122 161 RRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSL 240 (470)
Q Consensus 161 ~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~~~l 240 (470)
++++||||++++++|+++++++++++.++++++++.+++.|++++++++++|++++++.|+.+++|+||+++++|++.++
T Consensus 215 ~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al 294 (517)
T 3iyg_Z 215 KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSL 294 (517)
T ss_pred ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877755577899999999999999
Q ss_pred HHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCC-CcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCH
Q 012122 241 DLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGC-LGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPND 319 (470)
Q Consensus 241 ~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~-lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~ 319 (470)
+||.++||++++++++++|+|||++|||+++++++++++++ +|+|+ |++.++|+++|++|++|++++.|||+|||+|+
T Consensus 295 ~~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~ 373 (517)
T 3iyg_Z 295 DALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNK 373 (517)
T ss_pred HHHHHCCCEEEEecCHHHHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcH
Confidence 99999999999999999999999999999999999999999 99999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHH
Q 012122 320 HTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQ 399 (470)
Q Consensus 320 ~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~ 399 (470)
.+++|.+|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++||+|||.+|++|++|||+|+.
T Consensus 374 ~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~ 452 (517)
T 3iyg_Z 374 HTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEAL-VKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQ 452 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHH-HHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999 89998889999999999999999999999999999999
Q ss_pred HHHHHHHHhcc-CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 400 DVIIALKGEHD-RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 400 ~~i~~l~~~~~-~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
+++.+|++.|. ++.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.++
T Consensus 453 ~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 453 ETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 517 (517)
T ss_pred HHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999985 45789999999999999999999999999999999999999999999999864
No 2
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6e-99 Score=792.30 Aligned_cols=450 Identities=26% Similarity=0.465 Sum_probs=429.3
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhh-ccCcccCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK-FKTPVVMGD 79 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~-~s~~~~~~~ 79 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++ ++++++
T Consensus 59 i~v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~--- 135 (529)
T 3iyg_A 59 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTD--- 135 (529)
T ss_pred cccCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC---
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999 998886
Q ss_pred CCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcC---C-CccccccceEEEEecCCCcCCcEEEEeEEEecCCC
Q 012122 80 EPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK---P-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSR 155 (470)
Q Consensus 80 ~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~---~-~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~ 155 (470)
..+++.|.++|+|+++||+.+.+.++|+++++||+.++.+ . ...+|+++|+|+++.|+++.||++++|++|++++.
T Consensus 136 ~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~ 215 (529)
T 3iyg_A 136 ELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVG 215 (529)
T ss_pred CCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcc
Confidence 3468899999999999999999999999999999999862 2 23688899999999999999999999999999999
Q ss_pred CCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCC
Q 012122 156 HPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI 235 (470)
Q Consensus 156 ~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i 235 (470)
+|+||+.++||||+++++||+++++++++++.+++++++..+.+.|+++++.++++|.+.+ ++|||++++|
T Consensus 216 ~~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g---------~nvvi~~~~I 286 (529)
T 3iyg_A 216 SQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATG---------ANVILTTGGI 286 (529)
T ss_pred cccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999998865 2599999999
Q ss_pred CHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCC------CCCCcccceEEEEEECCeeEEEEEccCCCCe
Q 012122 236 DPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLT------PGCLGWAGLVYEHVLGEEKYTFVENVKNPHS 309 (470)
Q Consensus 236 ~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~------~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~ 309 (470)
++.+++||.++||++++++++++|+|||++|||++++++++++ ++++|+|+.|++.++|+++|++|++|++++.
T Consensus 287 ~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~ 366 (529)
T 3iyg_A 287 DDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTS 366 (529)
T ss_pred CHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCce
Confidence 9999999999999999999999999999999999999987765 5689999999999999999999999999999
Q ss_pred eEEEeeCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHH
Q 012122 310 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKT 389 (470)
Q Consensus 310 ~TIii~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~ 389 (470)
|||+|||+|+.+++|.+|++||||+++|+++++|++||||||+|++++.+| ++++.+.++++|+++++||+|||.||++
T Consensus 367 ~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L-~~~~~~~~g~eq~~i~~fa~ALe~ip~~ 445 (529)
T 3iyg_A 367 ASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL-ENYATSMGSREQLAIAEFARSLLVIPNT 445 (529)
T ss_pred EEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHH-HHHhhhcCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 8999889999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHhccCC---------CeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhh
Q 012122 390 LAENAGLDTQDVIIALKGEHDRG---------NIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460 (470)
Q Consensus 390 L~~NaG~d~~~~i~~l~~~~~~~---------~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii 460 (470)
|++|||+|+.+++.+|++.|..+ .++|+|+.+|++.||.+.|||||+.+|.++|++|+|+|++|||||++|
T Consensus 446 La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii 525 (529)
T 3iyg_A 446 LAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 525 (529)
T ss_pred HHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 99999999999999999988432 579999999999999999999999999999999999999999999999
Q ss_pred hcC
Q 012122 461 RAG 463 (470)
Q Consensus 461 ~~~ 463 (470)
...
T Consensus 526 ~~~ 528 (529)
T 3iyg_A 526 KLH 528 (529)
T ss_pred cCC
Confidence 874
No 3
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-98 Score=788.13 Aligned_cols=450 Identities=28% Similarity=0.485 Sum_probs=429.8
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ .
T Consensus 58 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 134 (515)
T 3iyg_G 58 IQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVD---T 134 (515)
T ss_pred cccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999886 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcC-CC--ccccccc-eEEEEecCCCcCCcEEEEeEEEecCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK-PE--EAIDLFM-VELMHMRHKFDVDTRLVEGLVLDHGSRH 156 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~-~~--~~~~~~~-i~i~~i~G~~~~~s~li~G~vl~~~~~~ 156 (470)
.+++.|.++|+|+++||..+.+.+.++++++||+..+.+ ++ ..+|+++ |+|++++|++++||++++|++|++++.+
T Consensus 135 ~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~ 214 (515)
T 3iyg_G 135 SNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTH 214 (515)
T ss_pred CCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCC
Confidence 468899999999999999999999999999999999873 22 2467764 9999999999999999999999999999
Q ss_pred CCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCC
Q 012122 157 PDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGID 236 (470)
Q Consensus 157 ~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~ 236 (470)
|.|+++++||||+++++||++++++.++++.+++++++..+++.|++++++++++|.+.+ |+||+++++|+
T Consensus 215 ~~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g---------~~vIi~~~~I~ 285 (515)
T 3iyg_G 215 PRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLK---------PDVVITEKGIS 285 (515)
T ss_pred CCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEECCccC
Confidence 999999999999999999999999999999999999999999999999999999998754 47999999999
Q ss_pred HHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcc-cceEEEEEECCeeEEEEEccCCCCeeEEEee
Q 012122 237 PLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPHSCTILIK 315 (470)
Q Consensus 237 ~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~ 315 (470)
+.+++||.++||++++++++++|+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++++.|||+||
T Consensus 286 ~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllr 365 (515)
T 3iyg_G 286 DLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLR 365 (515)
T ss_pred HHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEc
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcC
Q 012122 316 GPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAG 395 (470)
Q Consensus 316 g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG 395 (470)
|+|+.+++|.+|+++|||+++|++++++++|||||++|++++.+| ++++.+.++++|+++++||+|||.||++|++|||
T Consensus 366 G~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L-~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG 444 (515)
T 3iyg_G 366 GASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHAL-TEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCG 444 (515)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHH-HHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999 8999889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhccC--CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 396 LDTQDVIIALKGEHDR--GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 396 ~d~~~~i~~l~~~~~~--~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
+|+.+++.+|++.|.. +.++|+|+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|...
T Consensus 445 ~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 445 ASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred CCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 9999999999998843 3578999999999999999999999999999999999999999999999754
No 4
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.1e-100 Score=808.32 Aligned_cols=467 Identities=54% Similarity=0.883 Sum_probs=438.0
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++++++++. +.
T Consensus 66 i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~-~~ 144 (546)
T 3p9d_F 66 MQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTN-LS 144 (546)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSS-SS
T ss_pred ccCcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccc-cc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999998852 11
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC-CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM 159 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~-~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~ 159 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||++.+.+. ++.+|+++|+|++++|++..||++++|++|++++.+|.|
T Consensus 145 ~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m 224 (546)
T 3p9d_F 145 NDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDM 224 (546)
T ss_dssp TTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSS
T ss_pred cCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccC
Confidence 3678999999999999999999999999999999999743 246899999999999999999999999999999999999
Q ss_pred ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-CCCCceEEEecCCCCHH
Q 012122 160 KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCS-GNDNNFVVINQKGIDPL 238 (470)
Q Consensus 160 ~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~-~~~~~~vIi~~~~i~~~ 238 (470)
|++++||||++++|||+++++++++++.++++++++.+++.|++++++++++|+++++.+|+ .+++|+||+++++|++.
T Consensus 225 ~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~ 304 (546)
T 3p9d_F 225 PTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPM 304 (546)
T ss_dssp CSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHH
T ss_pred cceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999877663 14677899999999999
Q ss_pred HHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCC
Q 012122 239 SLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPN 318 (470)
Q Consensus 239 ~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t 318 (470)
+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+|
T Consensus 305 Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t 384 (546)
T 3p9d_F 305 SLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGST 384 (546)
T ss_dssp HHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSC
T ss_pred HHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHH---HhccccchhHHHHHHHHHHHhHhHHHHHHhcC
Q 012122 319 DHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNE---VKKTVEGRAQLGVEAFADALLVVPKTLAENAG 395 (470)
Q Consensus 319 ~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~---~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG 395 (470)
+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++ ++.+.++++|+++++||+||+.||++|++|||
T Consensus 385 e~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L-~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG 463 (546)
T 3p9d_F 385 HYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYL-RSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSG 463 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHH-HHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHH-HhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999 77 57888999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhcc------CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCCCC
Q 012122 396 LDTQDVIIALKGEHD------RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKP 469 (470)
Q Consensus 396 ~d~~~~i~~l~~~~~------~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~~~ 469 (470)
+|+.+++.+|++.|. .+.++|||+.+|++.||++.|||||+.+|.++|++|+|+|++|||||++|.+++.+.+.
T Consensus 464 ~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~~ 543 (546)
T 3p9d_F 464 FDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLKE 543 (546)
T ss_dssp CTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCCC
T ss_pred CCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 999999999999885 45789999999999999999999999999999999999999999999999999887653
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.9e-98 Score=788.65 Aligned_cols=454 Identities=33% Similarity=0.509 Sum_probs=434.0
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++++++++ .
T Consensus 68 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 144 (543)
T 3ruv_A 68 MSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVG---A 144 (543)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC---T
T ss_pred ccCcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999885 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCCc
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMK 160 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~~ 160 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.+.++.+|+++|+|+++.|++..+|++++|++|++++.+|+|+
T Consensus 145 ~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~ 224 (543)
T 3ruv_A 145 QDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMP 224 (543)
T ss_dssp TCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSC
T ss_pred CCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCcccc
Confidence 47899999999999999999999999999999999997642358999999999999999999999999999999999999
Q ss_pred cccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCHHHH
Q 012122 161 RRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLSL 240 (470)
Q Consensus 161 ~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~~~l 240 (470)
+.++||||++++++|+++++++++++.+++++++..+++.|+++++.++++|.+.+. +|||++++|++.++
T Consensus 225 ~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~---------~vvi~~~~I~~~al 295 (543)
T 3ruv_A 225 KKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGA---------NVLFCQKGIDDLAQ 295 (543)
T ss_dssp SEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTC---------SEEEESSCBCHHHH
T ss_pred ccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCC---------CEEEEeCCccHHHH
Confidence 999999999999999999999999999999999999999999999999999998752 58999999999999
Q ss_pred HHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCHH
Q 012122 241 DLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDH 320 (470)
Q Consensus 241 ~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~~ 320 (470)
+||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+|+.
T Consensus 296 ~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~ 375 (543)
T 3ruv_A 296 HYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEH 375 (543)
T ss_dssp HHHHHTTCEEECSCCHHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHH
T ss_pred HHHHHcCcEEEeeCCHHHHHHHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHH
Q 012122 321 TIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQD 400 (470)
Q Consensus 321 ~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~ 400 (470)
+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|+.+
T Consensus 376 ~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 454 (543)
T 3ruv_A 376 VIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL-REYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIE 454 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHH-HHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHH-HHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 9999999999999999999999999999999999999999 899988899999999999999999999999999999999
Q ss_pred HHHHHHHhcc-C-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCC
Q 012122 401 VIIALKGEHD-R-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 467 (470)
Q Consensus 401 ~i~~l~~~~~-~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~ 467 (470)
++.+|++.|. . +.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|...|.+.
T Consensus 455 ~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~ 523 (543)
T 3ruv_A 455 ILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRG 523 (543)
T ss_dssp HHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC----
T ss_pred HHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCC
Confidence 9999999884 3 46899999999999999999999999999999999999999999999999987653
No 6
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2.2e-97 Score=777.69 Aligned_cols=450 Identities=28% Similarity=0.422 Sum_probs=430.3
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++.+..
T Consensus 61 i~v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~ 140 (513)
T 3iyg_B 61 IGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEV 140 (513)
T ss_pred ccccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999998862111
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCCc
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMK 160 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~~ 160 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.+ .+|+++|+|+++.|++..||++++|++|++++.++ ||
T Consensus 141 ~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~---~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~ 216 (513)
T 3iyg_B 141 KFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKG---SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QP 216 (513)
T ss_pred cCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcc---cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-Cc
Confidence 368899999999999999999999999999999999965 38889999999999999999999999999999888 99
Q ss_pred cccccceeEEeeecccccccc-cccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCHHH
Q 012122 161 RRAENCYILTCNVSLEYEKSE-VNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLS 239 (470)
Q Consensus 161 ~~~~~~kI~l~~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~~~ 239 (470)
++++||||++++++|++++++ +++++.+++++++..+.+.|++++++++++|.+.+. +||+++++|++.+
T Consensus 217 ~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~---------~vvi~~~~I~~~a 287 (513)
T 3iyg_B 217 KRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGI---------NCFINRQLIYNYP 287 (513)
T ss_pred eeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCC---------CEEEEcCCccHHH
Confidence 999999999999999999999 999999999999999999999999999999987652 5899999999999
Q ss_pred HHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCH
Q 012122 240 LDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPND 319 (470)
Q Consensus 240 l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~ 319 (470)
++||.++||++++++++.+|+|||++|||++++++++++++++|+|+.|++..+|+++|++|++|+++++|||+|||+|+
T Consensus 288 l~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~ 367 (513)
T 3iyg_B 288 EQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQ 367 (513)
T ss_pred HHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHH
Q 012122 320 HTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQ 399 (470)
Q Consensus 320 ~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~ 399 (470)
.+++|++|+++|||+++|++++++++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|+.
T Consensus 368 ~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~ 446 (513)
T 3iyg_B 368 QILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAV-TQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSA 446 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHH-HHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 99999999999999999999999899999999999999999 89988889999999999999999999999999999999
Q ss_pred HHHHHHHHhccC-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCc
Q 012122 400 DVIIALKGEHDR-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 464 (470)
Q Consensus 400 ~~i~~l~~~~~~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~ 464 (470)
+++.+|++.|.. +.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.+.|
T Consensus 447 ~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 512 (513)
T 3iyg_B 447 DLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP 512 (513)
T ss_pred HHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999854 46899999999999999999999999999999999999999999999998865
No 7
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.1e-98 Score=785.32 Aligned_cols=454 Identities=31% Similarity=0.498 Sum_probs=380.8
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ .
T Consensus 22 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 98 (500)
T 3aq1_B 22 MDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAIS---P 98 (500)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC---T
T ss_pred CcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC---C
Confidence 6799999999999999999999999999999999999999999999999999999999999999999999999985 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC--C-cccc-ccceEEEEecCCCcCCcEEEEeEEEecCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP--E-EAID-LFMVELMHMRHKFDVDTRLVEGLVLDHGSRH 156 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~--~-~~~~-~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~ 156 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.+. + ..+| +++|+|++++|++.++|++++|++|++++.+
T Consensus 99 ~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~ 178 (500)
T 3aq1_B 99 DDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSH 178 (500)
T ss_dssp TCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSS
T ss_pred CcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCC
Confidence 4689999999999999999999999999999999999754 2 2477 7899999999999999999999999999999
Q ss_pred CCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCC
Q 012122 157 PDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGID 236 (470)
Q Consensus 157 ~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~ 236 (470)
|+||++++||||++++++|++++++.++++.++++++++.+++.|+++++..+++|.+.+ ++|||++++|+
T Consensus 179 ~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g---------~~lvi~~~~I~ 249 (500)
T 3aq1_B 179 PNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG---------ANVVFCQKGID 249 (500)
T ss_dssp TTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC---------CSEEEESSCBC
T ss_pred CCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC---------cCEEEECCCcC
Confidence 999999999999999999999999999999999999999999999999999999998764 25899999999
Q ss_pred HHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeC
Q 012122 237 PLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKG 316 (470)
Q Consensus 237 ~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g 316 (470)
+.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||
T Consensus 250 ~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG 329 (500)
T 3aq1_B 250 DMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHG 329 (500)
T ss_dssp HHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTCCCEEEEEEE
T ss_pred HHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCCCCceEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCC
Q 012122 317 PNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGL 396 (470)
Q Consensus 317 ~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~ 396 (470)
+|+.+++|.+|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++||+||+.||++|++|||+
T Consensus 330 ~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~ 408 (500)
T 3aq1_B 330 GTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRL-SEYASTLKGREQLAVSKFAEALEVIPVALAENAGL 408 (500)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHH-HHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-HHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999 89998889999999999999999999999999999
Q ss_pred CHHHHHHHHHHhccC-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCC
Q 012122 397 DTQDVIIALKGEHDR-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 467 (470)
Q Consensus 397 d~~~~i~~l~~~~~~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~ 467 (470)
|+.+++.+|++.|.. +.++|||..+|++.||.+.|||||+.+|+++|++|+|+|++|||||++|...|.++
T Consensus 409 d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 480 (500)
T 3aq1_B 409 DPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSAN 480 (500)
T ss_dssp CHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred CHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 999999999998854 46899999999999999999999999999999999999999999999999877543
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.1e-98 Score=789.60 Aligned_cols=453 Identities=34% Similarity=0.549 Sum_probs=432.2
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++++++++ .
T Consensus 79 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 155 (553)
T 3ko1_A 79 MDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVS---I 155 (553)
T ss_dssp SCCCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECC---T
T ss_pred hhccChhHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999885 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC--C-ccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP--E-EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP 157 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~--~-~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~ 157 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.+. + ..+|+++|+|+++.|++..+|++++|++|++++.+|
T Consensus 156 ~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~ 235 (553)
T 3ko1_A 156 NDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHP 235 (553)
T ss_dssp TCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCT
T ss_pred CcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCC
Confidence 4788999999999999999999999999999999999764 1 258999999999999999999999999999999999
Q ss_pred CCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCH
Q 012122 158 DMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237 (470)
Q Consensus 158 ~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~ 237 (470)
+|+++++||||++++++|+++++++++++.+++++++..+++.|+++++.++++|.+.+ ++|||++++|++
T Consensus 236 ~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g---------~~vvI~~~~I~~ 306 (553)
T 3ko1_A 236 GMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATG---------ANVIICQKGIDE 306 (553)
T ss_dssp TSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTC---------CSEEECSSCBCS
T ss_pred CCccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhc---------ceEEEeccChHH
Confidence 99999999999999999999999999999999999999999999999999999998764 259999999999
Q ss_pred HHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCC
Q 012122 238 LSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGP 317 (470)
Q Consensus 238 ~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~ 317 (470)
.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+
T Consensus 307 ~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~ 386 (553)
T 3ko1_A 307 VAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGG 386 (553)
T ss_dssp HHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCS
T ss_pred HHHHHHHhcchhhhhhhhhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|
T Consensus 387 te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d 465 (553)
T 3ko1_A 387 LERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKL-RKYAPQVGGKEQLAVEAYANALESLVSILIENAGFD 465 (553)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHH-HHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHH-HHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999 899888899999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCC--CeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCC
Q 012122 398 TQDVIIALKGEHDRG--NIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNM 466 (470)
Q Consensus 398 ~~~~i~~l~~~~~~~--~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~ 466 (470)
+.+++.+|++.|..+ .++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|...|.+
T Consensus 466 ~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 536 (553)
T 3ko1_A 466 PIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKS 536 (553)
T ss_dssp HHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC----
T ss_pred HHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhc
Confidence 999999999998543 679999999999999999999999999999999999999999999999988764
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.2e-97 Score=776.13 Aligned_cols=450 Identities=25% Similarity=0.451 Sum_probs=428.5
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++..+.
T Consensus 60 i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~ 139 (515)
T 3iyg_H 60 LDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDK 139 (515)
T ss_pred ccCCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCCh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999852111
Q ss_pred Cc-HHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCC
Q 012122 81 PD-KEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM 159 (470)
Q Consensus 81 ~~-~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~ 159 (470)
.+ ++.|.++|+|+++||+.+.+.++|+++++||+.++. +.+|++.|+|+++.|++..+|++++|++|++++.+|+|
T Consensus 140 ~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~---~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~ 216 (515)
T 3iyg_H 140 VEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD---DLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGF 216 (515)
T ss_pred HHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhc---ccCCcceEEEEecCCCCccceEEEeeeEEecCccCccc
Confidence 11 678899999999999999999999999999999985 36888999999999999999999999999999999965
Q ss_pred ---ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCC
Q 012122 160 ---KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGID 236 (470)
Q Consensus 160 ---~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~ 236 (470)
|+.++||||++++++|+++++++++++.+++++++..+++.|+++++.++++|.+.+ ++||+++++|+
T Consensus 217 ~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g---------~~vvi~~~~I~ 287 (515)
T 3iyg_H 217 EMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSG---------AKVVLSKLPIG 287 (515)
T ss_pred ccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CcEEEECCccc
Confidence 789999999999999999999999999999999999999999999999999998765 35999999999
Q ss_pred HHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeC
Q 012122 237 PLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKG 316 (470)
Q Consensus 237 ~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g 316 (470)
|.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||
T Consensus 288 dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG 367 (515)
T 3iyg_H 288 DVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRG 367 (515)
T ss_pred HHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCC
Q 012122 317 PNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGL 396 (470)
Q Consensus 317 ~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~ 396 (470)
+|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++||+||+.||++|++|||+
T Consensus 368 ~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~ 446 (515)
T 3iyg_H 368 GAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL-RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGF 446 (515)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHH-HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999 89998899999999999999999999999999999
Q ss_pred CHHHHHHHHHHhccC-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 397 DTQDVIIALKGEHDR-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 397 d~~~~i~~l~~~~~~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
|+.+++.+|++.|.. +.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.+.
T Consensus 447 d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 447 DATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred CHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999854 4679999999999999999999999999999999999999999999999864
No 10
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.5e-97 Score=783.98 Aligned_cols=454 Identities=36% Similarity=0.548 Sum_probs=434.1
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ .
T Consensus 72 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 148 (548)
T 1q3q_A 72 IDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVD---P 148 (548)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC---T
T ss_pred hhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999886 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCC---ccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPE---EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP 157 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~---~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~ 157 (470)
.|++.|.++|+|+++||+...+.++|+++++||+.++.+.+ ..+|+++|+|++++|++.++|++++|++|++++.+|
T Consensus 149 ~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 228 (548)
T 1q3q_A 149 DDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHP 228 (548)
T ss_dssp TCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSST
T ss_pred CCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCC
Confidence 46899999999999999999999999999999999997531 368899999999999999999999999999999999
Q ss_pred CCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCH
Q 012122 158 DMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237 (470)
Q Consensus 158 ~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~ 237 (470)
+||++++||||++++++|++++++.++++.++++++++.+++.|+++++..+++|.+.+. +|||++++|++
T Consensus 229 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~---------~lvi~~~~I~~ 299 (548)
T 1q3q_A 229 RMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGA---------NVVFVQKGIDD 299 (548)
T ss_dssp TSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTC---------CEEEESSCBCH
T ss_pred CCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCc---------CEEEEcCCcCH
Confidence 999999999999999999999999999999999999999999999999999999988752 59999999999
Q ss_pred HHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCC
Q 012122 238 LSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGP 317 (470)
Q Consensus 238 ~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~ 317 (470)
.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+
T Consensus 300 ~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~ 379 (548)
T 1q3q_A 300 LAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGG 379 (548)
T ss_dssp HHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEES
T ss_pred HHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|.+|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++||+||+.||++|++|||+|
T Consensus 380 te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 458 (548)
T 1q3q_A 380 TEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRL-DEYAKQVGGKEALAIENFADALKIIPKTLAENAGLD 458 (548)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHH-HHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999 899888889999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCC
Q 012122 398 TQDVIIALKGEHDR-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 467 (470)
Q Consensus 398 ~~~~i~~l~~~~~~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~ 467 (470)
+.+++.+|++.|.. +.++|||..+|++.||.+.|||||+.+|+++|++|+|+|++|||||++|...|.++
T Consensus 459 ~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 459 TVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC---
T ss_pred HHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 99999999998843 46899999999999999999999999999999999999999999999999887654
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=8e-98 Score=786.02 Aligned_cols=453 Identities=30% Similarity=0.508 Sum_probs=431.7
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ .
T Consensus 70 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~---~ 146 (543)
T 1a6d_B 70 MDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIG---A 146 (543)
T ss_dssp SCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC---T
T ss_pred hhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999886 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC--C-ccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP--E-EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP 157 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~--~-~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~ 157 (470)
.+++.|.++|+|+++||+...+.++|+++++||+.++.+. + ..+|+++|+|++++|++.++|++++|++|++++.+|
T Consensus 147 ~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 226 (543)
T 1a6d_B 147 DEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHP 226 (543)
T ss_dssp THHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSST
T ss_pred CCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCC
Confidence 3688999999999999999999999999999999999754 2 268999999999999999999999999999999999
Q ss_pred CCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCH
Q 012122 158 DMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237 (470)
Q Consensus 158 ~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~ 237 (470)
+||++++||||++++++|++++++.++++.++++++++.+++.|+++++..+++|.+.+ ++|||++++|++
T Consensus 227 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g---------~~lvi~~~~I~~ 297 (543)
T 1a6d_B 227 GMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVG---------ANVVITQKGIDD 297 (543)
T ss_dssp TSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEESSCBCH
T ss_pred CCcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEECCCcCH
Confidence 99999999999999999999999999999999999999999999999999999998865 259999999999
Q ss_pred HHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCC
Q 012122 238 LSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGP 317 (470)
Q Consensus 238 ~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~ 317 (470)
.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+
T Consensus 298 ~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~ 377 (543)
T 1a6d_B 298 MAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGE 377 (543)
T ss_dssp HHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEES
T ss_pred HHHHHHHHCCeeEeccCCHHHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++||+||+.||++|++|||+|
T Consensus 378 t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 456 (543)
T 1a6d_B 378 TEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRL-RSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLD 456 (543)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHH-HHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHH-HHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999 899888899999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCC
Q 012122 398 TQDVIIALKGEHDR-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNM 466 (470)
Q Consensus 398 ~~~~i~~l~~~~~~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~ 466 (470)
+.+++.+|++.|.. +.++|||..+|++.||.+.|||||+.+|+++|++|+|+|++|||||++|...|.+
T Consensus 457 ~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 526 (543)
T 1a6d_B 457 PIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSS 526 (543)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC-----
T ss_pred hHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccC
Confidence 99999999998854 4689999999999999999999999999999999999999999999999987753
No 12
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9e-97 Score=774.15 Aligned_cols=451 Identities=28% Similarity=0.440 Sum_probs=430.5
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++.. .
T Consensus 59 i~~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~ 137 (515)
T 3iyg_E 59 MDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVD-M 137 (515)
T ss_pred cccCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCC-c
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999988521 2
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC-CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM 159 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~-~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~ 159 (470)
.+++.|.++|+||++||+.+.+.++|+++++||++.+.+. ++.+|+++|+|++++|+++.+|++++|++|++++.+|+|
T Consensus 138 ~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m 217 (515)
T 3iyg_E 138 KNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQM 217 (515)
T ss_pred cCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccc
Confidence 3578999999999999998889999999999999999764 235889999999999999999999999999999999999
Q ss_pred ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCHHH
Q 012122 160 KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPLS 239 (470)
Q Consensus 160 ~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~~~ 239 (470)
|+.++||||++++|||++.+++.++++.+++++++..+.+.|+++++..+++|.+.+ + +|||++++|++.+
T Consensus 218 ~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g--------~-~vvi~~~~I~~~a 288 (515)
T 3iyg_E 218 PKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETG--------A-NLAVCQWGFDDEA 288 (515)
T ss_pred cccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------C-CEEEEeCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999998764 2 4889999999999
Q ss_pred HHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECC--eeEEEEEccCCCCeeEEEeeCC
Q 012122 240 LDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGE--EKYTFVENVKNPHSCTILIKGP 317 (470)
Q Consensus 240 l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~TIii~g~ 317 (470)
++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|+++++|+ ++|++|++|++++.|||+|||+
T Consensus 289 l~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~ 368 (515)
T 3iyg_E 289 NHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGG 368 (515)
T ss_pred HHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999987 8999999999999999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|
T Consensus 369 te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 447 (515)
T 3iyg_E 369 NKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAV-SQEADKCPTLEQYAMRAFADALEVIPMALAENSGMN 447 (515)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHH-HHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999 899988899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc--CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhc
Q 012122 398 TQDVIIALKGEHD--RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRA 462 (470)
Q Consensus 398 ~~~~i~~l~~~~~--~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~ 462 (470)
+.+++.+|++.|. .+.++|||..+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.+
T Consensus 448 ~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 448 PIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999884 3468999999999999999999999999999999999999999999999976
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-96 Score=772.85 Aligned_cols=449 Identities=27% Similarity=0.398 Sum_probs=429.3
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ .
T Consensus 60 i~v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 136 (518)
T 3iyg_D 60 MQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVE---L 136 (518)
T ss_pred cccchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999985 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC--CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP--EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD 158 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~--~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~ 158 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.++ .+.+|+++|+|+++.|++..+|++++|++|++++.+ .
T Consensus 137 ~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~ 215 (518)
T 3iyg_D 137 SDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-S 215 (518)
T ss_pred CChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-C
Confidence 4688999999999999999999999999999999999753 346899999999999999999999999999999998 8
Q ss_pred CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEe-----cC
Q 012122 159 MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVIN-----QK 233 (470)
Q Consensus 159 ~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~-----~~ 233 (470)
||+.++||||++++++|+++++++++++.++++++++.+++.|+++++..+++|.+.+ + +|+++ ++
T Consensus 216 mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g--------~-~lvi~~k~i~~~ 286 (518)
T 3iyg_D 216 GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTG--------C-NVLLIQKSILRD 286 (518)
T ss_pred CCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC--------C-CEEEEecccccc
Confidence 9999999999999999999999999999999999999999999999999999998764 2 47778 78
Q ss_pred CCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECC-eeEEEEEccCC-CCeeE
Q 012122 234 GIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGE-EKYTFVENVKN-PHSCT 311 (470)
Q Consensus 234 ~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~-~~~~~~~~~~~-~~~~T 311 (470)
+|++.+++||.++||++++++++.+|+|||++|||++++++++++++++|+|+.|++.++|+ ++|++|++|++ ++.||
T Consensus 287 ~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~t 366 (518)
T 3iyg_D 287 ALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVT 366 (518)
T ss_pred CcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 79999999988 89999
Q ss_pred EEeeCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHH
Q 012122 312 ILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLA 391 (470)
Q Consensus 312 Iii~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~ 391 (470)
|+|||+|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|+
T Consensus 367 I~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La 445 (518)
T 3iyg_D 367 IVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRL-TEYSRTLSGMESYCIRAFADAMEVIPSTLA 445 (518)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHH-HHHhhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 899888899999999999999999999999
Q ss_pred HhcCCCHHHHHHHHHHhcc-CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 392 ENAGLDTQDVIIALKGEHD-RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 392 ~NaG~d~~~~i~~l~~~~~-~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
+|||+|+.+++.+|++.|. ++.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.++
T Consensus 446 ~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 446 ENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred HhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 9999999999999999885 34679999999999999999999999999999999999999999999999764
No 14
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=3.3e-97 Score=782.24 Aligned_cols=456 Identities=28% Similarity=0.456 Sum_probs=433.4
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhh-ccCcccCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK-FKTPVVMGD 79 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~-~s~~~~~~~ 79 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++ +++|++
T Consensus 73 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~--- 149 (559)
T 3p9d_A 73 LDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVD--- 149 (559)
T ss_dssp HCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSC---
T ss_pred hcCCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC---
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999 999986
Q ss_pred CCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcC--C--CccccccceEEEEecCCCcCCcEEEEeEEEecCCC
Q 012122 80 EPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRK--P--EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSR 155 (470)
Q Consensus 80 ~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~--~--~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~ 155 (470)
..+++.|.++|+|+++||+.+.+.++|+++++||+.++.+ . .+.+|+++|+|++++|+++++|++++|++|++++.
T Consensus 150 ~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~ 229 (559)
T 3p9d_A 150 TLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVA 229 (559)
T ss_dssp C--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCS
T ss_pred CCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeeccc
Confidence 2357789999999999999999999999999999999973 1 24689999999999999999999999999999999
Q ss_pred CCCCccccc--cceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecC
Q 012122 156 HPDMKRRAE--NCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQK 233 (470)
Q Consensus 156 ~~~~~~~~~--~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~ 233 (470)
+|+|++.++ ||||++++++|+++++++++++.+++++++..+.+.|+++++..+++|.+.+ + +|||+++
T Consensus 230 ~~~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g--------~-~lvI~~~ 300 (559)
T 3p9d_A 230 SQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAG--------A-QVVLTTK 300 (559)
T ss_dssp STTSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTC--------C-SEEEESS
T ss_pred CCCcceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhC--------C-CEEEEcC
Confidence 999999999 9999999999999999999999999999999999999999999999998764 2 4899999
Q ss_pred CCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccC------CCCCCCCCcccceEEEEEECCeeEEEEEccCCC
Q 012122 234 GIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSV------DDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNP 307 (470)
Q Consensus 234 ~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~ 307 (470)
+|++.+++||.++||++++++++++|+|||++|||++++++ ++++++++|+|+.|++.++++++|++|++|+++
T Consensus 301 ~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~ 380 (559)
T 3p9d_A 301 GIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKH 380 (559)
T ss_dssp CCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSS
T ss_pred CCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCC
Confidence 99999999999999999999999999999999999999998 789999999999999999999999999999999
Q ss_pred CeeEEEeeCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhH
Q 012122 308 HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVP 387 (470)
Q Consensus 308 ~~~TIii~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip 387 (470)
++|||+|||+|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||
T Consensus 381 ~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip 459 (559)
T 3p9d_A 381 SSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYL-DNFATTVGSREQLAIAEFAAALLIIP 459 (559)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHH-HHHHTTSCTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHH-HHHhcccChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 89998889999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHhccC-CC------------eeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHh
Q 012122 388 KTLAENAGLDTQDVIIALKGEHDR-GN------------IVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLL 454 (470)
Q Consensus 388 ~~L~~NaG~d~~~~i~~l~~~~~~-~~------------~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL 454 (470)
++|++|||+|+.+++.+|++.|.. +. ++|||+.+|++.||++.|||||+.+|+++|++|+|+|++||
T Consensus 460 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL 539 (559)
T 3p9d_A 460 KTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAIL 539 (559)
T ss_dssp HHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998843 23 69999999999999999999999999999999999999999
Q ss_pred hhhHhhhcCcCCCCC
Q 012122 455 LVDEVIRAGRNMRKP 469 (470)
Q Consensus 455 ~id~ii~~~~~~~~~ 469 (470)
|||++|...|..+++
T Consensus 540 ~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 540 RIDTMITVDPEPPKE 554 (559)
T ss_dssp TEEEEEECCCCCCCC
T ss_pred hHHhhhhcCCccccc
Confidence 999999998776654
No 15
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.2e-96 Score=776.73 Aligned_cols=451 Identities=34% Similarity=0.528 Sum_probs=429.2
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++| +
T Consensus 71 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~---- 145 (545)
T 1a6d_A 71 MDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S---- 145 (545)
T ss_dssp SCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C----
T ss_pred hhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C----
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999987 4
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCC---ccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPE---EAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP 157 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~---~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~ 157 (470)
.+++.|.++|+|+++||+...+.++|+++++||+.++.+.+ ..+|+++|+|++++|++.++|++++|++|++++.+|
T Consensus 146 ~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~ 225 (545)
T 1a6d_A 146 TDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHS 225 (545)
T ss_dssp CCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCT
T ss_pred CCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCC
Confidence 36889999999999999999999999999999999997531 368899999999999999999999999999999999
Q ss_pred CCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCH
Q 012122 158 DMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237 (470)
Q Consensus 158 ~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~ 237 (470)
+||++++||||++++++|++++++.++++.++++++++.+++.|+++++..+++|.+.+. +|||++++|++
T Consensus 226 ~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~---------~lvi~~~~I~~ 296 (545)
T 1a6d_A 226 KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA---------NVVLCQKGIDD 296 (545)
T ss_dssp TSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTC---------CEEEESSCBCH
T ss_pred CCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CEEEECCCccH
Confidence 999999999999999999999999999999999999999999999999999999988652 59999999999
Q ss_pred HHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCC
Q 012122 238 LSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGP 317 (470)
Q Consensus 238 ~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~ 317 (470)
.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+
T Consensus 297 ~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~ 376 (545)
T 1a6d_A 297 VAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGG 376 (545)
T ss_dssp HHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCS
T ss_pred HHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|.+|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++||+||+.||++|++|||+|
T Consensus 377 te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 455 (545)
T 1a6d_A 377 TDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRL-AKYANSVGGREQLAIEAFAKALEIIPRTLAENAGID 455 (545)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHH-HHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHH-HHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999 899988899999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCC
Q 012122 398 TQDVIIALKGEHDR-GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNM 466 (470)
Q Consensus 398 ~~~~i~~l~~~~~~-~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~ 466 (470)
+.+++.+|++.|.. +.++|||..+|++.||.+.|||||+.+|+++|++|+|+|++|||||++|...|.+
T Consensus 456 ~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 456 PINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred HHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999998854 3689999999999999999999999999999999999999999999999987643
No 16
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3.2e-96 Score=775.26 Aligned_cols=455 Identities=25% Similarity=0.389 Sum_probs=430.1
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCC-
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGD- 79 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~- 79 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|++++++++..+
T Consensus 94 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~ 173 (562)
T 3p9d_E 94 MELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASND 173 (562)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCC
T ss_pred ccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999886321
Q ss_pred CCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC-CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCC
Q 012122 80 EPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD 158 (470)
Q Consensus 80 ~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~-~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~ 158 (470)
+.+++.|.++|+|+++||+.+.+.++|+++++||++.+.+. .+.+|+++|+|++++|+++.||++++|++|++++.+|+
T Consensus 174 ~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~ 253 (562)
T 3p9d_E 174 ELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQ 253 (562)
T ss_dssp SSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTS
T ss_pred hhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCC
Confidence 12247899999999999999999999999999999999764 24789999999999999999999999999999999999
Q ss_pred Ccccc------ccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEec
Q 012122 159 MKRRA------ENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQ 232 (470)
Q Consensus 159 ~~~~~------~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~ 232 (470)
|++.+ +++||+++++||++.++++++++.+++++++..+.+.|+++++..+++|.+.+. +|||++
T Consensus 254 m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~---------~vvI~~ 324 (562)
T 3p9d_E 254 MPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA---------DVVICQ 324 (562)
T ss_dssp CCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC---------SCCEEC
T ss_pred cCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC---------cEEEEe
Confidence 99999 999999999999999999999999999999999999999999999999988752 488999
Q ss_pred CCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECC--eeEEEEEccCCCCee
Q 012122 233 KGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGE--EKYTFVENVKNPHSC 310 (470)
Q Consensus 233 ~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~ 310 (470)
++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+ ++|++|++|++++.|
T Consensus 325 ~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~ 404 (562)
T 3p9d_E 325 WGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTV 404 (562)
T ss_dssp SSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCC
T ss_pred CCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999999985 899999999999999
Q ss_pred EEEeeCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHH
Q 012122 311 TILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTL 390 (470)
Q Consensus 311 TIii~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L 390 (470)
||+|||+|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|
T Consensus 405 TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~L 483 (562)
T 3p9d_E 405 TCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAV-SEEADKQRGIDQYAFRGFAQALDTIPMTL 483 (562)
T ss_dssp EEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHH-HHHHHTTCTTHHHHHHHHHHHHTHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHH-HHHhccCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 89988889999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHhcc--CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcC
Q 012122 391 AENAGLDTQDVIIALKGEHD--RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 465 (470)
Q Consensus 391 ~~NaG~d~~~~i~~l~~~~~--~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~ 465 (470)
++|||+|+.+++.+|++.|. .+.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.+++.
T Consensus 484 a~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 484 AENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred HHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999884 3468999999999999999999999999999999999999999999999998754
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=4.9e-97 Score=776.88 Aligned_cols=450 Identities=26% Similarity=0.388 Sum_probs=431.6
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ .
T Consensus 68 i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~---~ 144 (528)
T 3p9d_D 68 MAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVS---L 144 (528)
T ss_dssp SCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCC---S
T ss_pred cccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCC---C
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999986 3
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC-CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCC-
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP-EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD- 158 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~-~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~- 158 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.+. .+.+|+++|+|++++|++++||++++|++|++++.+|+
T Consensus 145 ~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~ 224 (528)
T 3p9d_D 145 SDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAG 224 (528)
T ss_dssp CCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSS
T ss_pred CCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCccc
Confidence 4788999999999999999999999999999999999753 34789999999999999999999999999999999998
Q ss_pred CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCC---
Q 012122 159 MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGI--- 235 (470)
Q Consensus 159 ~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i--- 235 (470)
||+.++||||++++++|+++++++++++.++++++++.+++.|+++++..+++|.+.+ ++|||++++|
T Consensus 225 m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g---------~~vvi~~~~I~~~ 295 (528)
T 3p9d_D 225 GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAK---------CNVLLIQKSILRD 295 (528)
T ss_dssp CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTT---------CCEEEESSCSCTT
T ss_pred CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEEeCCcccc
Confidence 9999999999999999999999999999999999999999999999999999998865 2589999999
Q ss_pred --CHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccC--C-CCee
Q 012122 236 --DPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVK--N-PHSC 310 (470)
Q Consensus 236 --~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~-~~~~ 310 (470)
++.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ + ++.|
T Consensus 296 a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~ 375 (528)
T 3p9d_D 296 AVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTV 375 (528)
T ss_dssp SCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCC
T ss_pred cCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 6 8999
Q ss_pred EEEeeCCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHH
Q 012122 311 TILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTL 390 (470)
Q Consensus 311 TIii~g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L 390 (470)
||+|||+|+.+++|.+|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|
T Consensus 376 tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~L 454 (528)
T 3p9d_D 376 SVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRL-SKEARSMEGVQAFIWQEFASALEVIPTTL 454 (528)
T ss_dssp EEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHH-HHCCTTSCHHHHTTHHHHHHHHTHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHH-HHHhhccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 88888889999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHhcc-CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 391 AENAGLDTQDVIIALKGEHD-RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 391 ~~NaG~d~~~~i~~l~~~~~-~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
++|||+|+.+++.+|++.|. +++++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|.++
T Consensus 455 a~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 455 AENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred HHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999884 34689999999999999999999999999999999999999999999999764
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=7.2e-97 Score=778.30 Aligned_cols=456 Identities=26% Similarity=0.430 Sum_probs=430.2
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.+++.|++++++++..+.
T Consensus 73 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~ 152 (550)
T 3p9d_G 73 LDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKS 152 (550)
T ss_dssp SCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC--
T ss_pred ccCCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999863222
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC---
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP--- 157 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~--- 157 (470)
.+++.|.++|+|+++||+.+.+.++|+++++||+.++.+ +.+|+++|+|++++|++++||++++|++|++++.+|
T Consensus 153 ~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~--~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~ 230 (550)
T 3p9d_G 153 SGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR--NDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFE 230 (550)
T ss_dssp ----CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCS--SSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCS
T ss_pred hhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCc--cccCchheeEEEecCCCccceeEEeeEEEeccccccccc
Confidence 237789999999999999999999999999999999964 368999999999999999999999999999999987
Q ss_pred CCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCH
Q 012122 158 DMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDP 237 (470)
Q Consensus 158 ~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~ 237 (470)
.||++++||||++++++|++++++.++++.+++++++..+++.|++++++++++|.+.+ ++||+++++|++
T Consensus 231 ~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g---------~~vVi~~~~I~d 301 (550)
T 3p9d_G 231 QQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETG---------ANIVLSKLPIGD 301 (550)
T ss_dssp CSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTT---------CSEEEESSCCCH
T ss_pred cCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCCccH
Confidence 68999999999999999999999999999999999999999999999999999998764 259999999999
Q ss_pred HHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCC
Q 012122 238 LSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGP 317 (470)
Q Consensus 238 ~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~ 317 (470)
.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++++.|||+|||+
T Consensus 302 la~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~ 381 (550)
T 3p9d_G 302 LATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGG 381 (550)
T ss_dssp HHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSS
T ss_pred HHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|
T Consensus 382 te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d 460 (550)
T 3p9d_G 382 AEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCL-RDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFD 460 (550)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHH-HHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSC
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHH-HHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999 899888899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc-CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCCC
Q 012122 398 TQDVIIALKGEHD-RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRK 468 (470)
Q Consensus 398 ~~~~i~~l~~~~~-~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~~ 468 (470)
+.+++.+|++.|. +++++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|...|..++
T Consensus 461 ~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 532 (550)
T 3p9d_G 461 AIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESA 532 (550)
T ss_dssp HHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC--
T ss_pred HHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccc
Confidence 9999999999883 4568999999999999999999999999999999999999999999999998876544
No 19
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=6.3e-96 Score=772.51 Aligned_cols=452 Identities=27% Similarity=0.471 Sum_probs=423.9
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERC-IDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGD 79 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~ 79 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.++ +.+|+||+.|++||+.|++.++++|+++++|++
T Consensus 68 i~~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--- 144 (590)
T 3p9d_C 68 IDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVD--- 144 (590)
T ss_dssp SCCCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTT---
T ss_pred hhCCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccc---
Confidence 6899999999999999999999999999999999999999999 999999999999999999999999999999886
Q ss_pred CCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCc---------ccccc-ceEEEEecCCCcCCcEEEEeEE
Q 012122 80 EPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEE---------AIDLF-MVELMHMRHKFDVDTRLVEGLV 149 (470)
Q Consensus 80 ~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~---------~~~~~-~i~i~~i~G~~~~~s~li~G~v 149 (470)
..+++.|.++|+|+++||+.+.+.++|+++++||+.++.+... .+|++ +|+|++++|++..||++++|++
T Consensus 145 ~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmv 224 (590)
T 3p9d_C 145 VENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVL 224 (590)
T ss_dssp TCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEE
T ss_pred cCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEE
Confidence 3357899999999999999999999999999999999875311 34554 6999999999999999999999
Q ss_pred EecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEE
Q 012122 150 LDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVV 229 (470)
Q Consensus 150 l~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vI 229 (470)
|++++.++.|+++++||||++++++|++++++.++++.+++++++..+++.|++++++++++|.+.+ |+||
T Consensus 225 fdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g---------~~vI 295 (590)
T 3p9d_C 225 LNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVR---------PTLV 295 (590)
T ss_dssp ECCCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTC---------CSEE
T ss_pred EecccCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999998754 4799
Q ss_pred EecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcc-cceEEEEEECCeeEEEEEccCCCC
Q 012122 230 INQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEKYTFVENVKNPH 308 (470)
Q Consensus 230 i~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~ 308 (470)
|++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+ |+.|++..+|+++|++|++|++++
T Consensus 296 I~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~ 375 (590)
T 3p9d_C 296 ITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPG 375 (590)
T ss_dssp CCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-----
T ss_pred EecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 999999899999999999998777
Q ss_pred e--------------------------------------------------------eEEEeeCCCHHHHHHHHHHHHhH
Q 012122 309 S--------------------------------------------------------CTILIKGPNDHTIAQIKDAVRDG 332 (470)
Q Consensus 309 ~--------------------------------------------------------~TIii~g~t~~~l~e~~~~l~da 332 (470)
. |||+|||+|+.+++|.+|+++||
T Consensus 376 ~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DA 455 (590)
T 3p9d_C 376 SGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDA 455 (590)
T ss_dssp ----------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHH
Confidence 6 99999999999999999999999
Q ss_pred HHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhcc-C
Q 012122 333 LRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-R 411 (470)
Q Consensus 333 l~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~-~ 411 (470)
|+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|. +
T Consensus 456 l~a~r~av~~~~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~ 534 (590)
T 3p9d_C 456 MAVARNVMLSPSLSPGGGATEMAVSVKL-AEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG 534 (590)
T ss_dssp HHHHHHHHHCCCEECTTTHHHHHHHHHH-HHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCEEeCccHHHHHHHHHH-HHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 9999999999899999999999999999 8888888999999999999999999999999999999999999999884 4
Q ss_pred CCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcC
Q 012122 412 GNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 465 (470)
Q Consensus 412 ~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~ 465 (470)
++++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|...|.
T Consensus 535 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 535 NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp CTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred CCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999999999999999999987763
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-94 Score=753.88 Aligned_cols=447 Identities=22% Similarity=0.337 Sum_probs=422.5
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccC--cccCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKT--PVVMG 78 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~--~~~~~ 78 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++ +.+
T Consensus 60 i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~-- 137 (512)
T 3iyg_Q 60 LEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKN-- 137 (512)
T ss_pred cccCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCC--
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999844 222
Q ss_pred CCCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCC
Q 012122 79 DEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD 158 (470)
Q Consensus 79 ~~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~ 158 (470)
..+++.|.++|+|+++||+.+ +.++|+++++||+.++.+.++.+|+++|+|.|++|+++.+|++++|++|++++.+
T Consensus 138 -~~~~~~l~~va~tsl~sK~~~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-- 213 (512)
T 3iyg_Q 138 -LRDVDEVSSLLHTSVMSKQYG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-- 213 (512)
T ss_pred -CCCHHHHHHHHHHHhCCCCcc-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC--
Confidence 237899999999999999775 6899999999999999765447899999999999999999999999999999875
Q ss_pred CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCHH
Q 012122 159 MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPL 238 (470)
Q Consensus 159 ~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~~ 238 (470)
|++.++||||+++++||++.+++.++++.+++++++..+.+.|++++++++++|.+.+. +||+++++|++.
T Consensus 214 ~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~---------~vvi~~~~I~~l 284 (512)
T 3iyg_Q 214 DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGA---------NVVVTGGRVADM 284 (512)
T ss_pred CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CEEEECCCccHH
Confidence 99999999999999999999999999999999999999999999999999999987652 588999999999
Q ss_pred HHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccC-CCCeeEEEeeCC
Q 012122 239 SLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVK-NPHSCTILIKGP 317 (470)
Q Consensus 239 ~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~-~~~~~TIii~g~ 317 (470)
+++||.++||++++++++.+|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+
T Consensus 285 a~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~ 364 (512)
T 3iyg_Q 285 ALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGS 364 (512)
T ss_pred HHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 478999999999
Q ss_pred CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCC
Q 012122 318 NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLD 397 (470)
Q Consensus 318 t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d 397 (470)
|+.+++|.+|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|
T Consensus 365 te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d 443 (512)
T 3iyg_Q 365 TDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQI-TSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVK 443 (512)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHH-HHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999 899888899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc-CCCeeeEEccCC--CccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 398 TQDVIIALKGEHD-RGNIVGLNQHSG--DPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 398 ~~~~i~~l~~~~~-~~~~~gid~~~~--~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
+.+++.+|++.|. +++++|||..+| ++.||++.|||||+.+|+++|++|+|+|++|||||++|.++
T Consensus 444 ~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 444 ANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 9999999999884 456899999965 99999999999999999999999999999999999999763
No 21
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6e-96 Score=774.02 Aligned_cols=452 Identities=24% Similarity=0.392 Sum_probs=416.1
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 80 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~ 80 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++++.. +.
T Consensus 75 i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~-~~ 153 (568)
T 3p9d_H 75 LDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEIT-DK 153 (568)
T ss_dssp CCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCC-CC
T ss_pred cccCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCC-CC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999987621 12
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC------CccccccceEEEEecCCCcCCcEEEEeEEEecCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP------EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGS 154 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~------~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~ 154 (470)
.+++.|.++|+|+++||+.+.+ ++|+++++||+.++.+. .+.+|+++|+|++++|++++||++++|++|++++
T Consensus 154 ~~~~~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~ 232 (568)
T 3p9d_H 154 NDKNELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREP 232 (568)
T ss_dssp CTTHHHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCB
T ss_pred CCHHHHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecc
Confidence 4788999999999999999887 99999999999999763 1358899999999999999999999999999987
Q ss_pred CCCCCccccc---cceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEe
Q 012122 155 RHPDMKRRAE---NCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVIN 231 (470)
Q Consensus 155 ~~~~~~~~~~---~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~ 231 (470)
. .|+++++ ||||++++|+|+++++++++++.+++++++..+++.|++++++++++|.+.+ ++|||+
T Consensus 233 ~--~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g---------~~vvi~ 301 (568)
T 3p9d_H 233 E--GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMG---------VECIVA 301 (568)
T ss_dssp S--SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEE
T ss_pred c--CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CeEEEE
Confidence 4 7899999 9999999999999999999999999999999999999999999999998865 259999
Q ss_pred cCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccC--CCCe
Q 012122 232 QKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVK--NPHS 309 (470)
Q Consensus 232 ~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~~~~ 309 (470)
+++|++.+++||.++||++++++++.+|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ +++.
T Consensus 302 ~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~ 381 (568)
T 3p9d_H 302 GAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRT 381 (568)
T ss_dssp CSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSS
T ss_pred CCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 7899
Q ss_pred eEEEeeCCCHHHHHHHHHHHHhHHHHHHHHhh--cCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhH
Q 012122 310 CTILIKGPNDHTIAQIKDAVRDGLRAVKNTIE--DEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVP 387 (470)
Q Consensus 310 ~TIii~g~t~~~l~e~~~~l~dal~~~~~~~~--~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip 387 (470)
|||+|||+|+.+++|.+|++||||+++|++++ ++++|||||++|++++.+| ++++.+.++++|+++++||+|||.||
T Consensus 382 ~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L-~~~a~~~~g~eq~~i~~fa~ALe~ip 460 (568)
T 3p9d_H 382 STIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRI-TKYGERTPGLLQLAIKQFAVAFEVVP 460 (568)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHH-HHHHHTCCSTHHHHHHHHHHGGGHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHH-HHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 8999999999999999999 89998899999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHhccC---------CCeeeEEccCCC---ccCcccCCcccchHHHHHHHHHHHHHHHHHhh
Q 012122 388 KTLAENAGLDTQDVIIALKGEHDR---------GNIVGLNQHSGD---PIDPQMEGIFDNYSVKRQIINSGPVIASQLLL 455 (470)
Q Consensus 388 ~~L~~NaG~d~~~~i~~l~~~~~~---------~~~~gid~~~~~---~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~ 455 (470)
++|++|||+|+.+++.+|++.|.. +.++|||+.+|+ +.||++.|||||+.+|+++|++|+|+|++|||
T Consensus 461 ~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 540 (568)
T 3p9d_H 461 RTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLS 540 (568)
T ss_dssp HHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC--
T ss_pred HHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998843 457999999997 99999999999999999999999999999999
Q ss_pred hhHhhhcCcCC
Q 012122 456 VDEVIRAGRNM 466 (470)
Q Consensus 456 id~ii~~~~~~ 466 (470)
||++|.++|.+
T Consensus 541 iD~ii~~~~~~ 551 (568)
T 3p9d_H 541 IDQIIMAKKAG 551 (568)
T ss_dssp -----------
T ss_pred HHHHhhccccC
Confidence 99999998764
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.4e-95 Score=764.15 Aligned_cols=455 Identities=28% Similarity=0.456 Sum_probs=425.0
Q ss_pred CcccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHc-CCChhhHHHHHHHHHHHHHHHHhhccCcccCCC
Q 012122 1 MQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDE-GMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGD 79 (470)
Q Consensus 1 ~~~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~ 79 (470)
|+++||+|+|++++|++||+++||||||+||||++||+++.+++.+ |+||+.|++||+.|++.++++|++++++++.++
T Consensus 67 i~~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~ 146 (527)
T 3p9d_B 67 IPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDK 146 (527)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCH
T ss_pred hccCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcc
Confidence 6899999999999999999999999999999999999999999999 999999999999999999999999999886211
Q ss_pred CCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCC
Q 012122 80 EPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDM 159 (470)
Q Consensus 80 ~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~ 159 (470)
+.+++.|.++|+||++||+.+.+.++|+++++||+.++.+. .|++.|+|+++.|++..||++++|++|++++.+|+
T Consensus 147 ~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~---~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~- 222 (527)
T 3p9d_B 147 TMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGS---TNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ- 222 (527)
T ss_dssp HHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTT---CCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-
T ss_pred hhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhccc---CCcceEEEEEcCCCCccccEEEEeEEEecccCCCC-
Confidence 11278999999999999999999999999999999999764 26778999999999999999999999999999987
Q ss_pred ccccccceeEEeeecccccccc-cccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEEEecCCCCHH
Q 012122 160 KRRAENCYILTCNVSLEYEKSE-VNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVVINQKGIDPL 238 (470)
Q Consensus 160 ~~~~~~~kI~l~~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vIi~~~~i~~~ 238 (470)
|++++||||++++++|++++++ +++++.+++++++..+.+.|+++++..+++|.+.+ ++||+++++|++.
T Consensus 223 p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g---------~~vvi~~~~I~~~ 293 (527)
T 3p9d_B 223 PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFG---------INTFINRQLIYDY 293 (527)
T ss_dssp CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTC---------CBEEESSCCCTTT
T ss_pred CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCCCCHH
Confidence 8889999999999999999999 69999999999999999999999999999997754 3599999999999
Q ss_pred HHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCC
Q 012122 239 SLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPN 318 (470)
Q Consensus 239 ~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t 318 (470)
+++||.++||++++++++.+|+|+|++|||++++++++++++++|+|+.|++..+|+++|++|++|+++++|||+|||+|
T Consensus 294 al~~L~~~~i~av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~t 373 (527)
T 3p9d_B 294 PEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGAT 373 (527)
T ss_dssp HHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTC
T ss_pred HHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCH
Q 012122 319 DHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDT 398 (470)
Q Consensus 319 ~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~ 398 (470)
+.+++|++|+++|||+++|+++++|++|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|+
T Consensus 374 e~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L-~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~ 452 (527)
T 3p9d_B 374 DQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAV-DTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDS 452 (527)
T ss_dssp TTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHH-HHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHH-HHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCH
Confidence 999999999999999999999999999999999999999999 8898888899999999999999999999999999999
Q ss_pred HHHHHHHHHhcc-CCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCCCC
Q 012122 399 QDVIIALKGEHD-RGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKP 469 (470)
Q Consensus 399 ~~~i~~l~~~~~-~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~~~ 469 (470)
.+++.+|++.|. ++.++|||+.+|++.||++.|||||+.+|+++|++|+|+|++|||||++|...|..++|
T Consensus 453 ~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 453 SELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp HHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred HHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 999999999884 34689999999999999999999999999999999999999999999999998876554
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.7e-79 Score=643.91 Aligned_cols=406 Identities=20% Similarity=0.351 Sum_probs=368.7
Q ss_pred CcccCh----HHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCccc
Q 012122 1 MQIQNP----TAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 76 (470)
Q Consensus 1 ~~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~ 76 (470)
|+++|| +|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++
T Consensus 59 i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~ 138 (543)
T 1we3_A 59 VELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE 138 (543)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC
T ss_pred cccCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 689999 9999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCc-EEEEeEEEecCCC
Q 012122 77 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDT-RLVEGLVLDHGSR 155 (470)
Q Consensus 77 ~~~~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s-~li~G~vl~~~~~ 155 (470)
+++.|.++|+++++ .++|+++++||+.++.+.+ .|.+. .|++.++| ++++|++|+++|.
T Consensus 139 -----~~~~l~~vA~iS~~-------~~~i~~li~dAv~~V~~~g------~I~Ve--~G~~~~ds~~lv~G~~~dkg~~ 198 (543)
T 1we3_A 139 -----DRKAIEEVATISAN-------DPEVGKLIADAMEKVGKEG------IITVE--ESKSLETELKFVEGYQFDKGYI 198 (543)
T ss_dssp -----SHHHHHHHHHHHHT-------CHHHHHHHHHHHHTTCTTS------EEEEE--ECSSSSCEEEEECSEEESCCBS
T ss_pred -----CHHHHHHhhhhhcC-------CHHHHHHHHHHHHHhCcCC------cEEEe--cCCccccceEEEcCEEEecCcc
Confidence 78899999998875 4789999999999886431 24554 79999999 9999999999999
Q ss_pred CCC-------CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceE
Q 012122 156 HPD-------MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFV 228 (470)
Q Consensus 156 ~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~v 228 (470)
+|+ |++.++||||+++++++ ++++++. ..+++|.+.+ + ++
T Consensus 199 ~p~~vt~~~~m~~~~en~~Ill~d~~I-------------s~~~~l~-----------~~le~i~~~g--------~-~l 245 (543)
T 1we3_A 199 SPYFVTNPETMEAVLEDAFILIVEKKV-------------SNVRELL-----------PILEQVAQTG--------K-PL 245 (543)
T ss_dssp SGGGCSBTTTTBCCEEEEEEEEESSCB-------------CCHHHHH-----------HHHHHHHTTT--------C-CE
T ss_pred ccccccCcccCceeecCceEEEECCCc-------------CCHHHHH-----------HHHHHHHhcC--------C-CE
Confidence 875 56679999999999876 3444433 4566775543 3 37
Q ss_pred EEecCCCCHHHHHHHHHc------CcEEEe-----cCChhhHHHHHHHhCCeeccc-----CCCCCCCCCcccceEEEEE
Q 012122 229 VINQKGIDPLSLDLLARA------GIIALR-----RAKRRNMERLVLACGGEAVNS-----VDDLTPGCLGWAGLVYEHV 292 (470)
Q Consensus 229 Ii~~~~i~~~~l~~l~~~------~I~~v~-----~v~~~~l~~i~~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ 292 (470)
+|++++|++++++||..| +|++++ ++++++|+|||++|||+++++ +++++++++|+|+.|+
T Consensus 246 vii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~--- 322 (543)
T 1we3_A 246 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR--- 322 (543)
T ss_dssp EEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEE---
T ss_pred EEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEE---
Confidence 778889999999999996 568888 678899999999999999996 8999999999999998
Q ss_pred ECCeeEEEEEccCCC-----------------------------------CeeEEEeeCCCHHHHHHHHHHHHhHHHHHH
Q 012122 293 LGEEKYTFVENVKNP-----------------------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVK 337 (470)
Q Consensus 293 ig~~~~~~~~~~~~~-----------------------------------~~~TIii~g~t~~~l~e~~~~l~dal~~~~ 337 (470)
+++++|++|++|+++ ++|||+|||+|+.+++|.+|+++|||+++|
T Consensus 323 ~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r 402 (543)
T 1we3_A 323 ITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATR 402 (543)
T ss_dssp ECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999998754 689999999999999999999999999999
Q ss_pred HHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhccCCCeeeE
Q 012122 338 NTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGL 417 (470)
Q Consensus 338 ~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~~~~~~gi 417 (470)
+++++| +|||||++|++++.+| ++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.| .+.++||
T Consensus 403 ~av~~g-iVpGGGa~e~~~s~~L-~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h-~~~~~G~ 479 (543)
T 1we3_A 403 AAVEEG-IVPGGGVTLLRAISAV-EELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET-KNPRYGF 479 (543)
T ss_dssp HHHHHC-EEETTTHHHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC-SCTTEEE
T ss_pred HHhccC-cCCCccHHHHHHHHHH-HHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhc-CCCCEEE
Confidence 999999 9999999999999999 899887889999999999999999999999999999999999999987 3568999
Q ss_pred EccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcC
Q 012122 418 NQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 465 (470)
Q Consensus 418 d~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~ 465 (470)
|..+|++.||++.|||||+.+|+++|++|+|+|++|||+|++|...|.
T Consensus 480 d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~ 527 (543)
T 1we3_A 480 NAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPE 527 (543)
T ss_dssp ETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSC
T ss_pred eCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999999999999999999998775
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.8e-79 Score=640.22 Aligned_cols=408 Identities=18% Similarity=0.286 Sum_probs=366.5
Q ss_pred CcccCh----HHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCccc
Q 012122 1 MQIQNP----TAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 76 (470)
Q Consensus 1 ~~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~ 76 (470)
|+++|| +|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++
T Consensus 59 i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~ 138 (547)
T 1kp8_A 59 IELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS 138 (547)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC
T ss_pred ccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC
Confidence 689999 9999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCc-EEEEeEEEecCCC
Q 012122 77 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDT-RLVEGLVLDHGSR 155 (470)
Q Consensus 77 ~~~~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s-~li~G~vl~~~~~ 155 (470)
+++.|.++|++++++ .++|+++++||+.++.+.+ .|.|. .|+++++| ++++|++|+++|.
T Consensus 139 -----~~e~l~~vA~iS~~~------~~~i~~liadAv~~V~~dg------~I~Ve--~G~~~~ds~~lveG~~fdkg~~ 199 (547)
T 1kp8_A 139 -----DSKAIAQVGTISANS------DETVGKLIAEAMDKVGKEG------VITVE--DGTGLQDELDVVEGMQFDRGYL 199 (547)
T ss_dssp -----SHHHHHHHHHHHTTS------CHHHHHHHHHHHHHHCTTS------EEEEE--CCSSSSCEEEEESCEEESCCBS
T ss_pred -----CHHHHHHHHHHhccc------hhHHHHHHHHHHHHhCcCC------cEEEE--eCCccccccEEEecEEEecCcc
Confidence 788999999998763 6789999999999986531 24554 89999999 9999999999999
Q ss_pred CCC-------CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceE
Q 012122 156 HPD-------MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFV 228 (470)
Q Consensus 156 ~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~v 228 (470)
+|+ |++.++||||++++++++ +++++. ..+++|.+.+ + ++
T Consensus 200 ~p~~vt~~~~m~~~lenp~Ill~d~~Is-------------~~~~l~-----------~~le~i~~~g--------~-~l 246 (547)
T 1kp8_A 200 SPYFINKPETGAVELESPFILLADKKIS-------------NIREML-----------PVLEAVAKAG--------K-PL 246 (547)
T ss_dssp STTCCSBTTTTBEEEESCEEECEESEEC-------------CGGGTH-----------HHHHHHHGGG--------C-CE
T ss_pred ccccccCcccCceEecCceEEEEcCcCC-------------CHHHHH-----------HHHHHHHhcC--------C-CE
Confidence 886 566799999999999763 333332 4567776654 2 37
Q ss_pred EEecCCCCHHHHHHHHHcC------cEEEe-----cCChhhHHHHHHHhCCeeccc-----CCCCCCCCCcccceEEEEE
Q 012122 229 VINQKGIDPLSLDLLARAG------IIALR-----RAKRRNMERLVLACGGEAVNS-----VDDLTPGCLGWAGLVYEHV 292 (470)
Q Consensus 229 Ii~~~~i~~~~l~~l~~~~------I~~v~-----~v~~~~l~~i~~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ 292 (470)
+|++++|++++++||..|+ |++++ ++++++|+|||++|||+++++ +++++++++|+|+.|+
T Consensus 247 vIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~--- 323 (547)
T 1kp8_A 247 LIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVV--- 323 (547)
T ss_dssp EEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEE---
T ss_pred EEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEE---
Confidence 7788899999999999975 57777 778899999999999999996 9999999999999998
Q ss_pred ECCeeEEEEEccCCC-----------------------------------CeeEEEeeCCCHHHHHHHHHHHHhHHHHHH
Q 012122 293 LGEEKYTFVENVKNP-----------------------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVK 337 (470)
Q Consensus 293 ig~~~~~~~~~~~~~-----------------------------------~~~TIii~g~t~~~l~e~~~~l~dal~~~~ 337 (470)
+++++|++|++|+++ ++|||+|||+|+.+++|++|+++|||+++|
T Consensus 324 ~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r 403 (547)
T 1kp8_A 324 INKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATR 403 (547)
T ss_dssp ECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHH
Confidence 578999999999865 689999999999999999999999999999
Q ss_pred HHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhccCCCeeeE
Q 012122 338 NTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGL 417 (470)
Q Consensus 338 ~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~~~~~~gi 417 (470)
+++++| +|||||++|++++.+| ++++. .++++|+++++|++||+.||++|++|||+|+.+++.+|++. +.++||
T Consensus 404 ~av~~g-iVpGGGa~e~~~s~~L-~~~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~---~~~~G~ 477 (547)
T 1kp8_A 404 AAVEEG-VVAGGGVALIRVASKL-ADLRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG---DGNYGY 477 (547)
T ss_dssp HHHHHC-EEETTTHHHHHHHHHT-TTCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS---CTTEEE
T ss_pred HhccCC-EEeCCcHHHHHHHHHH-HHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc---CCCEeE
Confidence 999999 9999999999999999 88776 78899999999999999999999999999999999999864 467999
Q ss_pred EccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCCCC
Q 012122 418 NQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKP 469 (470)
Q Consensus 418 d~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~~~ 469 (470)
|..+|++.||++.|||||+.+|+++|++|+|+|++||++|++|...|....|
T Consensus 478 d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~ 529 (547)
T 1kp8_A 478 NAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAA 529 (547)
T ss_dssp ETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC----
T ss_pred eCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccCCC
Confidence 9999999999999999999999999999999999999999999988765433
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=5.5e-80 Score=647.08 Aligned_cols=408 Identities=20% Similarity=0.328 Sum_probs=339.5
Q ss_pred CcccCh----HHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCccc
Q 012122 1 MQIQNP----TAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 76 (470)
Q Consensus 1 ~~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~ 76 (470)
|+++|| +|+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++
T Consensus 60 i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~ 139 (545)
T 1iok_A 60 IELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVN 139 (545)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred hccCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 689999 9999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCc-EEEEeEEEecCCC
Q 012122 77 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDT-RLVEGLVLDHGSR 155 (470)
Q Consensus 77 ~~~~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s-~li~G~vl~~~~~ 155 (470)
+++.|.++|++++++ .++|+++++||+.++.+.+ . |.|. +|++.++| ++++|++|+++|.
T Consensus 140 -----~~e~l~~va~iS~~~------~~~i~~li~dAv~~V~~~g-~-----I~Ve--~G~~~~ds~~lveG~~~dkg~~ 200 (545)
T 1iok_A 140 -----DSSEVAQVGTISANG------ESFIGQQIAEAMQRVGNEG-V-----ITVE--ENKGMETEVEVVEGMQFDRGYL 200 (545)
T ss_dssp -----STTTTTHHHHHTTTT------CHHHHHHHHHHHHHHCTTS-C-----CCCE--ECSSSCCEEEEECCEECSCCCS
T ss_pred -----CHHHHHHHHHhhcCC------chhHHHHHHHHHHHhccCC-e-----EEEE--eCCccccceEEEecEEEecCcc
Confidence 567899999988763 6789999999999996532 2 3333 79999999 9999999999999
Q ss_pred CCC-------CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceE
Q 012122 156 HPD-------MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFV 228 (470)
Q Consensus 156 ~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~v 228 (470)
+|+ |++.++||||++++++|+. ++++. ..+++|.+. ++| +
T Consensus 201 ~p~~vt~~~~m~~~~en~~Ill~d~~I~~-------------~~~l~-----------~~le~i~~~--------g~~-l 247 (545)
T 1iok_A 201 SPYFVTNADKMIAELEDAYILLHEKKLSS-------------LQPMV-----------PLLESVIQS--------QKP-L 247 (545)
T ss_dssp CGGGCCCSSSSCEEEEEEEEEECSSCBCC-------------CCC------------------------------CCC-C
T ss_pred ccccccCcccCceeecCCeEEEEcCCcCC-------------HHHHH-----------HHHHHHHhc--------CCC-E
Confidence 875 6677999999999998742 22222 346666543 334 6
Q ss_pred EEecCCCCHHHHHHHHHcC------cEEEe-----cCChhhHHHHHHHhCCeeccc-----CCCCCCCCCcccceEEEEE
Q 012122 229 VINQKGIDPLSLDLLARAG------IIALR-----RAKRRNMERLVLACGGEAVNS-----VDDLTPGCLGWAGLVYEHV 292 (470)
Q Consensus 229 Ii~~~~i~~~~l~~l~~~~------I~~v~-----~v~~~~l~~i~~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ 292 (470)
+|++++|++++++||..++ |++++ ++++++|+|||++|||+++++ +++++++++|+|+.|+
T Consensus 248 vIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~--- 324 (545)
T 1iok_A 248 LIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVS--- 324 (545)
T ss_dssp EEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEE---
T ss_pred EEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEE---
Confidence 6777799999999999975 57777 778999999999999999996 9999999999999998
Q ss_pred ECCeeEEEEEccCCC-----------------------------------CeeEEEeeCCCHHHHHHHHHHHHhHHHHHH
Q 012122 293 LGEEKYTFVENVKNP-----------------------------------HSCTILIKGPNDHTIAQIKDAVRDGLRAVK 337 (470)
Q Consensus 293 ig~~~~~~~~~~~~~-----------------------------------~~~TIii~g~t~~~l~e~~~~l~dal~~~~ 337 (470)
+++++|++|++|+++ ++|||+|||+|+.+++|.+|+++|||+++|
T Consensus 325 ~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r 404 (545)
T 1iok_A 325 INKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATR 404 (545)
T ss_dssp ECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 578999999998754 689999999999999999999999999999
Q ss_pred HHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhccCCCeeeE
Q 012122 338 NTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGL 417 (470)
Q Consensus 338 ~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~~~~~~gi 417 (470)
+++++| +|||||++|++++.+| ++++. .++++|+++++|++||+.||++|++|||+|+.+++.+|++.| +.++||
T Consensus 405 ~av~~g-iVpGGGa~e~~~s~~L-~~~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~--~~~~G~ 479 (545)
T 1iok_A 405 AAVQEG-IVVGGGVALVQGAKVL-EGLSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS--DKAFGF 479 (545)
T ss_dssp HHHHHC-EEETTTHHHHHHGGGG-GSCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC--STTEEE
T ss_pred HHhhcC-CCCCchHHHHHHHHHH-HHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc--CCCeeE
Confidence 999999 9999999999999999 88776 788999999999999999999999999999999999999776 567999
Q ss_pred EccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCCC
Q 012122 418 NQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRK 468 (470)
Q Consensus 418 d~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~~ 468 (470)
|..+|++.||++.|||||+.+|+++|++|+|+|++||++|++|...|....
T Consensus 480 d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 480 NAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp ETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC----
T ss_pred eCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCC
Confidence 999999999999999999999999999999999999999999998876443
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=2.1e-78 Score=632.87 Aligned_cols=405 Identities=21% Similarity=0.325 Sum_probs=344.4
Q ss_pred CcccChH----HHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCccc
Q 012122 1 MQIQNPT----AIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 76 (470)
Q Consensus 1 ~~~~hP~----a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~ 76 (470)
|+++||+ |+|++++|++||+++||||||+||||++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++
T Consensus 59 i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~ 138 (546)
T 3rtk_A 59 IELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE 138 (546)
T ss_dssp --CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC
T ss_pred ccCCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 6799998 999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCC
Q 012122 77 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRH 156 (470)
Q Consensus 77 ~~~~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~ 156 (470)
+++.|.++|++|++ .+.++++++||+.++.+.+ .|.|.+.. +...+|++++|++|+++|.+
T Consensus 139 -----~~e~L~~vA~iS~~-------~~~i~~liadAv~~V~~dg------vI~Ve~~~-~~~~ds~lveGm~fdkg~~s 199 (546)
T 3rtk_A 139 -----TKEQIAATAAISAG-------DQSIGDLIAEAMDKVGNEG------VITVEESN-TFGLQLELTEGMRFDKGYIS 199 (546)
T ss_dssp -----SHHHHHHHHHHHHT-------CHHHHHHHHHHHHHSCTTS------EEEEECCS-SSSCEEEEECEEEESCCBSS
T ss_pred -----ChHHHHhHeEEeCC-------chHHHHHHHHHHHHhccCC------ceEEEecC-CcccceEEeeeEEEcCCccC
Confidence 78899999999876 4578999999999886531 35666533 55679999999999999998
Q ss_pred C-------CCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCceEE
Q 012122 157 P-------DMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNNFVV 229 (470)
Q Consensus 157 ~-------~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~~vI 229 (470)
| .|++.++||||++++++++ +++++. ..+++|.+.+ +| |+
T Consensus 200 p~~vt~~e~m~~~len~kIll~d~kIs-------------~~~~l~-----------~~le~I~~~g--------~~-lv 246 (546)
T 3rtk_A 200 GYFVTDPERQEAVLEDPYILLVSSKVS-------------TVKDLL-----------PLLEKVIGAG--------KP-LL 246 (546)
T ss_dssp GGGCSBTTTTBEEEESCEEEEBSSEEC-------------CSTTTH-----------HHHHHHHTTT--------CC-EE
T ss_pred cccccCcccCeeEecccEEEEECCccC-------------CHHHHH-----------HHHHHHHhcC--------CC-EE
Confidence 8 4688899999999998753 333332 3467776543 33 77
Q ss_pred EecCCCCHHHHHHHHHcC------cEEEecC-----ChhhHHHHHHHhCCeecc-----cCCCCCCCCCcccceEEEEEE
Q 012122 230 INQKGIDPLSLDLLARAG------IIALRRA-----KRRNMERLVLACGGEAVN-----SVDDLTPGCLGWAGLVYEHVL 293 (470)
Q Consensus 230 i~~~~i~~~~l~~l~~~~------I~~v~~v-----~~~~l~~i~~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i 293 (470)
|++++|++++++||..|+ +++++.. ++++|+|||++|||++++ ++++++++++|+|+.|+ +
T Consensus 247 Ii~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i 323 (546)
T 3rtk_A 247 IIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---V 323 (546)
T ss_dssp EEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---E
T ss_pred EEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---E
Confidence 788899999999999874 4666543 478999999999999999 58999999999999998 7
Q ss_pred CCeeEEEEEccCCCC-----------------------------------eeEEEeeCCCHHHHHHHHHHHHhHHHHHHH
Q 012122 294 GEEKYTFVENVKNPH-----------------------------------SCTILIKGPNDHTIAQIKDAVRDGLRAVKN 338 (470)
Q Consensus 294 g~~~~~~~~~~~~~~-----------------------------------~~TIii~g~t~~~l~e~~~~l~dal~~~~~ 338 (470)
++++|++|++|++++ +|||+|||+|+.+++|++|+++|||+++|+
T Consensus 324 ~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~ 403 (546)
T 3rtk_A 324 TKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKA 403 (546)
T ss_dssp CSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988643 799999999999999999999999999999
Q ss_pred HhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhccCCCeeeEE
Q 012122 339 TIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLN 418 (470)
Q Consensus 339 ~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~~~~~~gid 418 (470)
++++| +|||||++|++++.+| ++++ .++++|+++++|++||+.||++|++|||+|+.+++.+|++.+ ..+|||
T Consensus 404 av~~g-iVpGGGa~e~~~s~~L-~~~~--~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~G~d 476 (546)
T 3rtk_A 404 AVEEG-IVAGGGVTLLQAAPTL-DELK--LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP---AGHGLN 476 (546)
T ss_dssp HHHHC-EEETTTHHHHTTGGGS-TTSC--CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC---TTEECC
T ss_pred HHhCC-cccCCcHHHHHHHHHH-HHhc--cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCEeEc
Confidence 99998 9999999999999999 7776 689999999999999999999999999999999999998752 348999
Q ss_pred ccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCcCCC
Q 012122 419 QHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMR 467 (470)
Q Consensus 419 ~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~~~~ 467 (470)
..+|++.||++.|||||+.+|.++|++|+|+|++|||+|++|...|.+.
T Consensus 477 ~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~ 525 (546)
T 3rtk_A 477 AQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKE 525 (546)
T ss_dssp SSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred CCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999999887644
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=4.2e-38 Score=284.13 Aligned_cols=173 Identities=32% Similarity=0.563 Sum_probs=149.1
Q ss_pred cCCcEEEEeEEEecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 012122 139 DVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNK 218 (470)
Q Consensus 139 ~~~s~li~G~vl~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~ 218 (470)
++||++++|++|++++.++.||++++||||++++++|++++++.++++.++++++++.+++.|++++++++++|.+++
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g-- 78 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLK-- 78 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcC--
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcc-cceEEEEEECCee
Q 012122 219 VCSGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGW-AGLVYEHVLGEEK 297 (470)
Q Consensus 219 ~~~~~~~~~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~ig~~~ 297 (470)
++||+++|+|+|.+++||.++||++++++++++|+|||++|||++++++++++++++|+ |+.|++.++|+++
T Consensus 79 -------~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~ 151 (178)
T 1gml_A 79 -------PDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEY 151 (178)
T ss_dssp -------CSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEE
T ss_pred -------CcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeE
Confidence 36999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEEEEccCCCCeeEEEeeCCCHH
Q 012122 298 YTFVENVKNPHSCTILIKGPNDH 320 (470)
Q Consensus 298 ~~~~~~~~~~~~~TIii~g~t~~ 320 (470)
|++|++|+++++|||+|||++..
T Consensus 152 ~~~~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 152 FTFITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp EEEEEEESSTTSCEEEEEC----
T ss_pred EEEEECCCCCCEEEEEEECCCcc
Confidence 99999999999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=3.6e-33 Score=246.84 Aligned_cols=154 Identities=34% Similarity=0.511 Sum_probs=147.5
Q ss_pred EEeEEEecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 012122 145 VEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGND 224 (470)
Q Consensus 145 i~G~vl~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~ 224 (470)
++|++|++++.++.||+.++||||+++++||+++++++++++.++++++++.+++.|++++++++++|.+++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g-------- 72 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSG-------- 72 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTT--------
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCC--------
Confidence 469999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred CceEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEcc
Q 012122 225 NNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENV 304 (470)
Q Consensus 225 ~~~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~ 304 (470)
++||+++|+|+|.+++||.++||++++++++++|+|||++|||++++++++++++.+|+|+.|++.++|+++|++|++|
T Consensus 73 -~nVVl~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~ 151 (159)
T 1ass_A 73 -ANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGC 151 (159)
T ss_dssp -CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESC
T ss_pred -CeEEEECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECC
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 012122 305 KNP 307 (470)
Q Consensus 305 ~~~ 307 (470)
++.
T Consensus 152 ~~~ 154 (159)
T 1ass_A 152 KNH 154 (159)
T ss_dssp C--
T ss_pred CCc
Confidence 864
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.38 E-value=6.8e-13 Score=117.21 Aligned_cols=145 Identities=17% Similarity=0.305 Sum_probs=105.7
Q ss_pred cEEEEeEEEecCCCCCC-------CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHH
Q 012122 142 TRLVEGLVLDHGSRHPD-------MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIE 214 (470)
Q Consensus 142 s~li~G~vl~~~~~~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~ 214 (470)
.++++||.|+++|.+|+ |...++||.|++++..+ ++..++..+ ++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKI-------------s~i~~ilP~-----------LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKI-------------SSLPDLLPL-----------LEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEE-------------CCHHHHHHH-----------HHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCcc-------------CCHHHHHHH-----------HHHHHH
Confidence 35788999999999986 45578899999999766 344444443 233332
Q ss_pred hcccccCCCCCceEEEecCCCCHHHHHHHHHc------CcEEEecC-----ChhhHHHHHHHhCCeecc-----cCCCCC
Q 012122 215 LKNKVCSGNDNNFVVINQKGIDPLSLDLLARA------GIIALRRA-----KRRNMERLVLACGGEAVN-----SVDDLT 278 (470)
Q Consensus 215 ~~~~~~~~~~~~~vIi~~~~i~~~~l~~l~~~------~I~~v~~v-----~~~~l~~i~~~tGa~ii~-----~~~~l~ 278 (470)
.++|++|+++ +|+.+|+..|.-| ++++++.. ++..|++||.+||+++++ ++++.+
T Consensus 58 --------~~kpLlIIAe-dvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~ 128 (194)
T 3m6c_A 58 --------TGKPLLIVAE-DVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVG 128 (194)
T ss_dssp --------HTCCEEEEES-EECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCC
T ss_pred --------hCCCeEEEec-ccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCC
Confidence 2468999998 9999999999987 35778887 478899999999999998 356788
Q ss_pred CCCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCHHHHHHHHHHHHhHHH
Q 012122 279 PGCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 334 (470)
Q Consensus 279 ~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~~~l~e~~~~l~dal~ 334 (470)
.+++|+|.+|. +..++.+++. ++.++..++++...+...+.
T Consensus 129 ~~~LG~a~~v~---vtkd~T~iv~------------G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 129 LEVLGSARRVV---VSKDDTVIVD------------GGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp GGGCEEEEEEE---ECSSCEEEEE------------ECCCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCccEEE---EcCCceEEec------------CCCCHHHHHHHHHHHHHHHH
Confidence 88999999997 6555444333 23455566666555555443
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.37 E-value=9.7e-13 Score=110.87 Aligned_cols=121 Identities=18% Similarity=0.361 Sum_probs=94.4
Q ss_pred eEEEecCCCCCCC-------ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 012122 147 GLVLDHGSRHPDM-------KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKV 219 (470)
Q Consensus 147 G~vl~~~~~~~~~-------~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~ 219 (470)
|+.|+++|.+|+| ...++||.|++++..+ ++..++..+ ++++.
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~llP~-----------LE~v~------ 50 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV-------------SNVRELLPI-----------LEQVA------ 50 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEE-------------CCHHHHHHH-----------HHHHH------
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccc-------------cCHHHHHHH-----------HHHHH------
Confidence 8999999999864 5567899999999766 344444333 22332
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHc------CcEEEecC-----ChhhHHHHHHHhCCeeccc-----CCCCCCCCCc
Q 012122 220 CSGNDNNFVVINQKGIDPLSLDLLARA------GIIALRRA-----KRRNMERLVLACGGEAVNS-----VDDLTPGCLG 283 (470)
Q Consensus 220 ~~~~~~~~vIi~~~~i~~~~l~~l~~~------~I~~v~~v-----~~~~l~~i~~~tGa~ii~~-----~~~l~~~~lG 283 (470)
+.++|++|+++ +|+.+|+..|.-| ++++++.. ++..|++||.+||+++++. +++.+.+++|
T Consensus 51 --~~~~pLlIIAe-dvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG 127 (145)
T 1srv_A 51 --QTGKPLLIIAE-DVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLG 127 (145)
T ss_dssp --TTTCCEEEEES-EECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCE
T ss_pred --HHCCCEEEEec-ccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCC
Confidence 34578999998 9999999999988 35778877 5789999999999999984 5567778999
Q ss_pred ccceEEEEEECCeeEEEEEc
Q 012122 284 WAGLVYEHVLGEEKYTFVEN 303 (470)
Q Consensus 284 ~~~~v~~~~ig~~~~~~~~~ 303 (470)
+|.+|. +..++.+++.+
T Consensus 128 ~a~~v~---vtkd~TtIv~G 144 (145)
T 1srv_A 128 RAERVR---ITKDETTIVGG 144 (145)
T ss_dssp EEEEEE---ECSSCEEEEEE
T ss_pred ccCEEE---EcCCCeEEeCC
Confidence 999997 77777777653
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.36 E-value=3.3e-12 Score=113.07 Aligned_cols=141 Identities=19% Similarity=0.322 Sum_probs=102.9
Q ss_pred EeEEEecCCCCCCC-------ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 012122 146 EGLVLDHGSRHPDM-------KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNK 218 (470)
Q Consensus 146 ~G~vl~~~~~~~~~-------~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~ 218 (470)
+|+.|+++|.+|+| ...++||.|++++..+ ++..++ +++++.
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~i------------------lP~LE~ 61 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKI-------------SNIREL------------------LPVLEG 61 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEE-------------CCHHHH------------------HHHHHH
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCcc-------------CCHHHH------------------HHHHHH
Confidence 59999999999864 4578899999999876 333333 333332
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHc------CcEEEecC-----ChhhHHHHHHHhCCeeccc-----CCCCCCCCC
Q 012122 219 VCSGNDNNFVVINQKGIDPLSLDLLARA------GIIALRRA-----KRRNMERLVLACGGEAVNS-----VDDLTPGCL 282 (470)
Q Consensus 219 ~~~~~~~~~vIi~~~~i~~~~l~~l~~~------~I~~v~~v-----~~~~l~~i~~~tGa~ii~~-----~~~l~~~~l 282 (470)
.+ +.++|++||++ +|+.+|+..|.-| ++++++.. ++..|++||.+||+++++. +++.+.+++
T Consensus 62 v~-~~~rpLlIIAE-DvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~L 139 (201)
T 3osx_A 62 VA-KASKPLVIIAE-DVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDL 139 (201)
T ss_dssp HH-TSSCCEEEEEE-EECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGC
T ss_pred HH-HhCCCeEEEec-cccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhC
Confidence 22 34679999998 9999999999987 35778887 4778999999999999984 567788899
Q ss_pred cccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCHHHHHHHHHHHHhHHH
Q 012122 283 GWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 334 (470)
Q Consensus 283 G~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~~~l~e~~~~l~dal~ 334 (470)
|+|.+|. +..++.+++. ++.++..++++...+...+.
T Consensus 140 G~a~~V~---vtkd~TtIv~------------G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 140 GQAKRVV---INKDTTTIID------------GVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp EEEEEEE---ECSSCEEEEE------------ECCCHHHHHHHHHHHHHHHH
T ss_pred CCccEEE---EcCCceEEec------------CCCCHHHHHHHHHHHHHHHH
Confidence 9999997 6555444333 23455666666655555443
No 32
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=29.56 E-value=93 Score=20.98 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCChhhHHHHHHHHH---HHHHHHHhhcc
Q 012122 38 KQSERCIDEGMHPRVLVDGFEIAK---RATLQFLEKFK 72 (470)
Q Consensus 38 ~~~~~li~~gi~p~~I~~g~~~a~---~~~~~~l~~~s 72 (470)
.+...|+..|++....+++++.+- +.+-.+|.++.
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFA 50 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhc
Confidence 356778899999999999998873 45555555544
No 33
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.66 E-value=1.4e+02 Score=20.24 Aligned_cols=35 Identities=14% Similarity=0.353 Sum_probs=27.2
Q ss_pred HHHHHcCCChhhHHHHHHHH----HHHHHHHHhhccCcc
Q 012122 41 ERCIDEGMHPRVLVDGFEIA----KRATLQFLEKFKTPV 75 (470)
Q Consensus 41 ~~li~~gi~p~~I~~g~~~a----~~~~~~~l~~~s~~~ 75 (470)
..|++.|+++.....+++.. ++.++++|.+++.|-
T Consensus 14 q~L~eMGFd~erae~Alk~Tg~~Gle~AmewL~k~~~~~ 52 (54)
T 2cos_A 14 QELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMSGPS 52 (54)
T ss_dssp HHHHHHHCCHHHHHHHHHHHTSCCHHHHHHHHHHHSCSC
T ss_pred HHHHHcCCCHHHHHHHHHHhCcccHHHHHHHHHHhcCCC
Confidence 55778899998877777765 667888898888764
No 34
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=20.42 E-value=1.5e+02 Score=24.08 Aligned_cols=42 Identities=19% Similarity=0.234 Sum_probs=32.3
Q ss_pred eEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCe
Q 012122 227 FVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGE 269 (470)
Q Consensus 227 ~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ 269 (470)
.+|+|. +|.+.+...|.++||-++......--+.|.....++
T Consensus 78 ~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 78 ELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp SEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred CEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 588887 899999999999999999876654445555555554
No 35
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex, interferon, HOST cytoplasm, interferon antiviral system evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Probab=20.21 E-value=2.6e+02 Score=23.30 Aligned_cols=77 Identities=12% Similarity=0.076 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhcCc------------cccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhH
Q 012122 320 HTIAQIKDAVRDGLRAVKNTIEDEA------------VVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVP 387 (470)
Q Consensus 320 ~~l~e~~~~l~dal~~~~~~~~~~~------------vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip 387 (470)
...+|+.+.++.+..+..-.+..+. -+||-|++.-.|++.+ .+..+. +..-+.+...|..+|.+
T Consensus 38 ~~v~eA~~kl~st~~lteE~f~kp~isakdl~~il~~HLpG~~TaFHqLvqvI-~kvgkD-~~~Ldi~h~eFqa~Lae-- 113 (184)
T 3ks4_A 38 DAVQEAYKNLDSTSTLTEENFGKPYISAKDLKEIMYDHLPGFGTAFHQLVQVI-CKIGKD-NNLLDTIHAEFQASLAD-- 113 (184)
T ss_dssp ----------------------CCSSCHHHHHHHHHHTCSSSSCHHHHHHHHH-HHHHHH-HTCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHhhhhhhhhhcccCCCCcCHHHHHHHHHHhCCCCCchHHHHHHHH-HHHccc-hhHHHHHHHHHHHHHhc--
Confidence 3455666666666655544444332 3899999999999999 776442 34567778888777654
Q ss_pred HHHHHhcCCCHHHHHHHHHH
Q 012122 388 KTLAENAGLDTQDVIIALKG 407 (470)
Q Consensus 388 ~~L~~NaG~d~~~~i~~l~~ 407 (470)
|-++.-.+.++..
T Consensus 114 -------GdS~q~AlIqITk 126 (184)
T 3ks4_A 114 -------GDSPQCALIQITK 126 (184)
T ss_dssp -------TCCHHHHHHHHHH
T ss_pred -------CCCcchhHHHHHh
Confidence 7677666666543
Done!