Query 012122
Match_columns 470
No_of_seqs 128 out of 1500
Neff 8.4
Searched_HMMs 13730
Date Mon Mar 25 03:12:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012122.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012122hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a6db1 a.129.1.2 (B:20-144,B: 100.0 7.4E-38 5.4E-42 294.2 18.0 113 348-461 130-243 (243)
2 d1a6da1 a.129.1.2 (A:17-145,A: 100.0 8.9E-35 6.5E-39 274.2 16.7 115 345-460 130-245 (245)
3 d1gmla_ c.8.5.2 (A:) Thermosom 100.0 2.3E-34 1.7E-38 255.9 17.6 167 141-316 1-168 (168)
4 d1q3qa1 a.129.1.2 (A:9-145,A:4 100.0 3.6E-32 2.6E-36 258.1 19.4 119 344-463 138-257 (258)
5 d1a6db2 c.8.5.2 (B:216-367) Th 100.0 2.1E-32 1.5E-36 238.6 16.1 152 147-307 1-152 (152)
6 d1q3qa2 c.8.5.2 (A:217-369) Th 100.0 5.4E-32 3.9E-36 236.5 17.8 153 146-307 1-153 (153)
7 d1assa_ c.8.5.2 (A:) Thermosom 100.0 6.8E-32 5E-36 235.5 14.2 152 145-305 1-152 (152)
8 d1sjpa1 a.129.1.1 (A:62-134,A: 99.9 6.1E-26 4.4E-30 202.8 14.0 87 368-457 94-180 (180)
9 d1we3a1 a.129.1.1 (A:3-138,A:4 99.8 7.4E-21 5.4E-25 179.8 13.5 152 311-464 103-255 (255)
10 d1a6da3 d.56.1.2 (A:146-214,A: 99.6 3.2E-17 2.3E-21 131.9 3.4 99 82-183 2-103 (105)
11 d1q3qa3 d.56.1.2 (A:146-216,A: 99.6 6.3E-17 4.6E-21 130.9 1.7 98 81-181 4-104 (107)
12 d1a6db3 d.56.1.2 (B:145-215,B: 99.5 2E-16 1.5E-20 127.7 -2.1 94 82-176 4-105 (107)
13 d1ioka1 a.129.1.1 (A:2-136,A:4 99.5 3.3E-14 2.4E-18 133.0 9.3 144 316-464 109-252 (252)
14 d1kp8a1 a.129.1.1 (A:2-136,A:4 99.4 7.7E-13 5.6E-17 123.6 12.9 113 1-116 59-175 (252)
15 d1srva_ c.8.5.1 (A:) GroEL, A 99.4 4.3E-13 3.1E-17 113.3 8.5 121 147-303 1-144 (145)
16 d1kida_ c.8.5.1 (A:) GroEL, A 99.4 5.5E-13 4E-17 118.4 8.9 144 143-334 5-171 (193)
17 d1sjpa2 c.8.5.1 (A:189-372) Gr 99.3 3.1E-12 2.3E-16 112.8 12.3 140 147-334 1-163 (184)
18 d1ioka2 c.8.5.1 (A:191-366) Gr 99.3 5.7E-13 4.1E-17 116.6 6.9 141 146-334 1-164 (176)
19 d1ioka1 a.129.1.1 (A:2-136,A:4 99.2 9.5E-11 6.9E-15 109.1 13.2 108 5-115 67-174 (252)
20 d1kp8a1 a.129.1.1 (A:2-136,A:4 99.1 9.8E-11 7.1E-15 109.0 11.9 133 326-464 116-251 (252)
21 d1we3a1 a.129.1.1 (A:3-138,A:4 98.9 2.6E-09 1.9E-13 99.4 11.0 74 3-76 64-137 (255)
22 d1sjpa3 d.56.1.1 (A:135-188,A: 95.2 0.00024 1.7E-08 53.3 -4.7 76 82-171 4-87 (89)
23 d1we3a3 d.56.1.1 (A:139-189,A: 88.8 0.016 1.1E-06 42.6 -2.1 58 82-154 2-60 (86)
24 d1kp8a3 d.56.1.1 (A:137-190,A: 88.1 0.0098 7.1E-07 45.0 -3.8 62 82-158 4-67 (97)
25 d1ioka3 d.56.1.1 (A:137-190,A: 86.3 0.56 4.1E-05 34.9 5.4 36 306-341 61-96 (97)
26 d1ioka3 d.56.1.1 (A:137-190,A: 81.7 0.014 1E-06 44.0 -5.6 61 82-157 4-66 (97)
27 d1kp8a3 d.56.1.1 (A:137-190,A: 80.8 1 7.5E-05 33.4 4.8 35 308-342 63-97 (97)
28 d1st6a3 a.24.9.1 (A:253-371) V 60.0 31 0.0023 25.8 9.1 71 321-392 13-85 (119)
29 d1l0ba2 c.15.1.3 (A:1705-1801) 35.0 14 0.001 26.6 3.2 36 252-288 14-49 (97)
30 d1eo1a_ c.55.5.1 (A:) Hypothet 34.1 39 0.0029 24.9 6.2 41 227-268 67-107 (124)
31 d1cf7b_ a.4.5.17 (B:) Cell cyc 21.3 34 0.0025 23.7 3.1 21 319-339 46-66 (82)
32 d1gnwa1 a.45.1.1 (A:86-211) Cl 20.7 58 0.0042 24.0 4.8 44 317-360 46-91 (126)
No 1
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=100.00 E-value=7.4e-38 Score=294.18 Aligned_cols=113 Identities=35% Similarity=0.556 Sum_probs=108.6
Q ss_pred CCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhcc-CCCeeeEEccCCCccC
Q 012122 348 GAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-RGNIVGLNQHSGDPID 426 (470)
Q Consensus 348 GGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~-~~~~~gid~~~~~~~d 426 (470)
|||++|+.+|..+ .++++++++++|+++++|++||+.||++|++|||+|+.+++.+|+..|. ++.++|+|..+|++.|
T Consensus 130 ggGa~e~~~a~~l-~~~a~~~~g~~q~~i~~~a~Ale~ip~~LaeNaG~d~~~~i~~l~~~h~~~~~~~Gvd~~~g~i~d 208 (243)
T d1a6db1 130 GGGATAAEIAFRL-RSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIED 208 (243)
T ss_dssp TTTHHHHHHHHHH-HHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEE
T ss_pred CCCchhHHHHHHH-hhhhhccCCHHHHHHHHHHHHhhccCccccccCCCChhHHHHHHHHHHhCCCCceeEECcCCEEee
Confidence 6999999999999 9999999999999999999999999999999999999999999999984 4578999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhh
Q 012122 427 PQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIR 461 (470)
Q Consensus 427 ~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~ 461 (470)
|.+.|||||+.+|+++|+.|+|+|++|||||++|.
T Consensus 209 ~~~~gV~dp~~vk~~ai~~A~e~a~~iL~iD~iis 243 (243)
T d1a6db1 209 MVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIA 243 (243)
T ss_dssp TTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC
T ss_pred hHhcccEecHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999873
No 2
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=100.00 E-value=8.9e-35 Score=274.16 Aligned_cols=115 Identities=36% Similarity=0.559 Sum_probs=110.3
Q ss_pred cccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhcc-CCCeeeEEccCCC
Q 012122 345 VVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-RGNIVGLNQHSGD 423 (470)
Q Consensus 345 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~-~~~~~gid~~~~~ 423 (470)
++||||++|++++.+| .+++++.++.+|+++++|++||+.||++|++|+|+|+.+++.+++..|. .+.++|+|+.+|.
T Consensus 130 ~v~g~ga~e~~l~~~l-~~~a~~~~g~eq~a~~~~a~Ale~ip~~laeNaG~D~i~iv~~l~~~~~~~~~~~Gv~~~~g~ 208 (245)
T d1a6da1 130 FLWGGGAVEAELAMRL-AKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNG 208 (245)
T ss_dssp EEETTTHHHHHHHHHH-HHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTE
T ss_pred eecCchhHHHHHHHHH-HHHHhccCCHHHHHHHHHHHHHhhhhhhhhccCCCCchhhhhhhhcccccCCceeeEEccCCe
Confidence 7899999999999999 8999999999999999999999999999999999999999999999885 3578999999999
Q ss_pred ccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhh
Q 012122 424 PIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVI 460 (470)
Q Consensus 424 ~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii 460 (470)
+.||.+.|||||+.+|.+++++|+|+|++|||||++|
T Consensus 209 i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~iD~ii 245 (245)
T d1a6da1 209 VGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVI 245 (245)
T ss_dssp EEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred EeehHhcCccccHHHHHHHHHHHHHHHHHHHhhceeC
Confidence 9999999999999999999999999999999999986
No 3
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=100.00 E-value=2.3e-34 Score=255.88 Aligned_cols=167 Identities=32% Similarity=0.574 Sum_probs=146.0
Q ss_pred CcEEEEeEEEecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 012122 141 DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVC 220 (470)
Q Consensus 141 ~s~li~G~vl~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~ 220 (470)
||++++|+++++++.++.||+.++||||++++++|++++++.++++.++++++++.+++.|++++++++++|..++
T Consensus 1 DS~li~Gvvi~k~~~~~~m~~~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g---- 76 (168)
T d1gmla_ 1 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLK---- 76 (168)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred CcEEEEEEEEecccCCcCCccccCCceEEEEeccccccccccccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCccc-ceEEEEEECCeeEE
Q 012122 221 SGNDNNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWA-GLVYEHVLGEEKYT 299 (470)
Q Consensus 221 ~~~~~~~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~-~~v~~~~ig~~~~~ 299 (470)
++||+++++||+.+++||.++||++++++++++|+|||++|||++++++++++++++|+| +.+++..+|++.|+
T Consensus 77 -----~~vv~~~~~I~~~a~~~L~~~gI~~~~rv~~~dl~ria~~tga~iv~si~~l~~~~lG~~~~~~~~~~~~~~~~~ 151 (168)
T d1gmla_ 77 -----PDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFT 151 (168)
T ss_dssp -----CSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEE
T ss_pred -----CceEEEcCCCCHHHHHHHHHCCCeeeccCCHHHHHHHHHHHCCceeCchhhcCcccccccccEEEEEEECCeEEE
Confidence 469999999999999999999999999999999999999999999999999999999995 66677788999999
Q ss_pred EEEccCCCCeeEEEeeC
Q 012122 300 FVENVKNPHSCTILIKG 316 (470)
Q Consensus 300 ~~~~~~~~~~~TIii~g 316 (470)
+|++|+++..|||+|||
T Consensus 152 ~~~~~~~~~~~TIllRG 168 (168)
T d1gmla_ 152 FITDCKDPKACTILLRG 168 (168)
T ss_dssp EEEEESSTTSCEEEEEC
T ss_pred EEEecCCCCEEEEEEeC
Confidence 99999999999999998
No 4
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.98 E-value=3.6e-32 Score=258.13 Aligned_cols=119 Identities=42% Similarity=0.618 Sum_probs=113.1
Q ss_pred ccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhcc-CCCeeeEEccCC
Q 012122 344 AVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHD-RGNIVGLNQHSG 422 (470)
Q Consensus 344 ~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~-~~~~~gid~~~~ 422 (470)
.++||||++|+..+..+ ..+++...+.++++++.|++||+.||++|++|+|+|+.+++.+++..|. .+.+.|+|+.+|
T Consensus 138 ~~~~~~g~~ei~~a~~l-~~~a~~~~~~~~~a~~~~a~Al~~Ip~~la~N~G~d~i~~v~~l~~~~~~~~~~~gvdv~~G 216 (258)
T d1q3qa1 138 AVLPAGGAPEIELAIRL-DEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEG 216 (258)
T ss_dssp EEEECTTHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTT
T ss_pred hccCCCchHHHHHHHHH-HhhhcccchHHHHHHHHHHHhccchhhhhhhhcCCccceehhhhhhhcccCCCceEEEEECC
Confidence 47899999999999999 8999999999999999999999999999999999999999999998884 467899999999
Q ss_pred CccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcC
Q 012122 423 DPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAG 463 (470)
Q Consensus 423 ~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~ 463 (470)
.+.||.+.|+|||+.+|.++++.|++++.+||+||++|.++
T Consensus 217 ~~~D~~~~Gii~p~~vk~~~l~~A~e~a~~IL~iD~iI~ak 257 (258)
T d1q3qa1 217 KPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 257 (258)
T ss_dssp EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred EEeEchHcCccccHHHHHHHHHHHHHHhCcceeEccEEeeC
Confidence 99999999999999999999999999999999999999875
No 5
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.98 E-value=2.1e-32 Score=238.57 Aligned_cols=152 Identities=33% Similarity=0.514 Sum_probs=147.7
Q ss_pred eEEEecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCc
Q 012122 147 GLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDNN 226 (470)
Q Consensus 147 G~vl~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~~ 226 (470)
|++|++++.++.||+.++||||++++++|++++++.++++.++++++++.+++.|++++++++++|..++ +
T Consensus 1 Gvv~~k~~~~~~mpk~i~~~kIlll~~~Le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g---------~ 71 (152)
T d1a6db2 1 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVG---------A 71 (152)
T ss_dssp EEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTT---------C
T ss_pred CEEEeccCCCCCCCCcccCCcEEEEecccccccccccceeeecCHHHHHHHHHHHHHHHHHHHHHHhccC---------C
Confidence 8999999999999999999999999999999999999999999999999999999999999999998865 4
Q ss_pred eEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccCC
Q 012122 227 FVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVKN 306 (470)
Q Consensus 227 ~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~ 306 (470)
+||+++|+||+.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|++
T Consensus 72 nvv~~~k~Idd~a~~~l~k~gI~~v~~v~~~dl~rla~~tGa~iv~s~~~l~~~~LG~~~~v~~~~~g~~~~~~~~gc~n 151 (152)
T d1a6db2 72 NVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN 151 (152)
T ss_dssp CEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS
T ss_pred ceEEecCCCcHHHHHHHHHcCcchhccCCHHHHHHHHHHhCCeeecchhhCCcccCcCceEEEEEEECCEEEEEEeCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred C
Q 012122 307 P 307 (470)
Q Consensus 307 ~ 307 (470)
|
T Consensus 152 p 152 (152)
T d1a6db2 152 P 152 (152)
T ss_dssp S
T ss_pred C
Confidence 6
No 6
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.98 E-value=5.4e-32 Score=236.51 Aligned_cols=153 Identities=39% Similarity=0.571 Sum_probs=148.4
Q ss_pred EeEEEecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q 012122 146 EGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGNDN 225 (470)
Q Consensus 146 ~G~vl~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~~ 225 (470)
.|+++++...++.||+.++||||++++|+|++++++.++++.++++++++.|+++|++++++++++|..++
T Consensus 1 kGvv~~k~~~~~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g--------- 71 (153)
T d1q3qa2 1 RGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTG--------- 71 (153)
T ss_dssp SSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHT---------
T ss_pred CeEEEeCCCCCccCCcccCCccEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHhccC---------
Confidence 39999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred ceEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEccC
Q 012122 226 NFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENVK 305 (470)
Q Consensus 226 ~~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~ 305 (470)
++||+++|+||+.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.+++..+|+++|++|+||+
T Consensus 72 ~nvvl~~k~I~~~a~~~l~~~gI~~v~~v~~~dl~ria~~tGa~iv~si~~l~~~~LG~~~~~~~~~~g~~~~~~~~gc~ 151 (153)
T d1q3qa2 72 ANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCK 151 (153)
T ss_dssp CCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCS
T ss_pred ccceeecCCCcHHHHHHHHHcCCceeccCCHHHHHHHHHhhCCEEecchhhCCcccCeeeEEEEEEEECCeeEEEEeCCC
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 012122 306 NP 307 (470)
Q Consensus 306 ~~ 307 (470)
+|
T Consensus 152 ~P 153 (153)
T d1q3qa2 152 NP 153 (153)
T ss_dssp SC
T ss_pred CC
Confidence 76
No 7
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.97 E-value=6.8e-32 Score=235.45 Aligned_cols=152 Identities=34% Similarity=0.512 Sum_probs=146.9
Q ss_pred EEeEEEecCCCCCCCccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 012122 145 VEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKVCSGND 224 (470)
Q Consensus 145 i~G~vl~~~~~~~~~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~~~~~~ 224 (470)
++|+++++.+.++.||+.++||||+++++||++++++.++++.++++++++.|++.|++++++++++|..++
T Consensus 1 i~Gvv~~k~~~~~~mp~~i~~~kI~ll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g-------- 72 (152)
T d1assa_ 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSG-------- 72 (152)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTT--------
T ss_pred CeEEEEeCccCCCCCCccccCceEEEEecccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence 469999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred CceEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceEEEEEECCeeEEEEEcc
Q 012122 225 NNFVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLVYEHVLGEEKYTFVENV 304 (470)
Q Consensus 225 ~~~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~ 304 (470)
++||+++++||+.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.+++.++|+++|++|+||
T Consensus 73 -~nvvl~~~~I~~~a~~~l~k~gI~~v~~v~~~dl~ria~atGa~iv~s~~~l~~~~LG~~~~v~~~~ig~~~~~~~~GC 151 (152)
T d1assa_ 73 -ANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGC 151 (152)
T ss_dssp -CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESC
T ss_pred -cceEEEeccccHHHHHHHHHcCCccccCCCHHHHHHHHHHhCCceeCCcccCCcccCeeeeEEEEEEECCEEEEEEecC
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 012122 305 K 305 (470)
Q Consensus 305 ~ 305 (470)
+
T Consensus 152 k 152 (152)
T d1assa_ 152 K 152 (152)
T ss_dssp C
T ss_pred C
Confidence 5
No 8
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.93 E-value=6.1e-26 Score=202.80 Aligned_cols=87 Identities=26% Similarity=0.289 Sum_probs=80.1
Q ss_pred ccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHhccCCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHH
Q 012122 368 VEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGP 447 (470)
Q Consensus 368 ~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i~~l~~~~~~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~ 447 (470)
.+++++.++++|++||+.||++|++|||.|+..++.+++.. .+++|||..+|+++||++.||+||..|++.+|++|+
T Consensus 94 ~~~~e~~g~~i~~~Al~~p~~~I~~NaG~~~~~v~~~~~~~---~~~~G~d~~~~~~~dm~e~GIiDP~kV~~~AL~~A~ 170 (180)
T d1sjpa1 94 LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL---PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAA 170 (180)
T ss_dssp CCTHHHHHHHHHHHHTTHHHHHHHHTTTSCHHHHHHHHHTS---CTTEECCTTTCCCEETTTTTCEEEHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcc---ccccCccccccccccHHHcCCcCcHHHHHHHHHhHH
Confidence 45688999999999999999999999999999888888643 467999999999999999999999999999999999
Q ss_pred HHHHHHhhhh
Q 012122 448 VIASQLLLVD 457 (470)
Q Consensus 448 e~a~~lL~id 457 (470)
++|++||+++
T Consensus 171 s~a~~~ltte 180 (180)
T d1sjpa1 171 SIAGLFLTTE 180 (180)
T ss_dssp HHHHHHTTC-
T ss_pred HHHHHHHhCC
Confidence 9999999874
No 9
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=99.84 E-value=7.4e-21 Score=179.80 Aligned_cols=152 Identities=22% Similarity=0.301 Sum_probs=136.6
Q ss_pred EEEeeCC-CHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHH
Q 012122 311 TILIKGP-NDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKT 389 (470)
Q Consensus 311 TIii~g~-t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~ 389 (470)
+.+..|. ...+.++++++.++++.+++...++..++||||++|+.++..+ +.+.....+.+++++++|++||+.||++
T Consensus 103 ~~i~~G~~~~~i~~g~~~a~~~al~~l~~~~~~~~~v~ggg~~~~~~~~~~-~~~~~~~~g~~~~g~~iva~Al~~~~~~ 181 (255)
T d1we3a1 103 KNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVGIVPGGGVTLLRAISAV-EELIKKLEGDEATGAKIVRRALEEPARQ 181 (255)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCEEETTTHHHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHTTHHHHH
T ss_pred hHHhcCCccchhhhhhhhhhHHHHHHHHHHhhhcceeccchhhhhhhhhhh-HhhccCCChHHHHHHHHHHHHHhhhHHH
Confidence 3344444 4577899999999999999998888889999999999999999 8888888999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHhccCCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCc
Q 012122 390 LAENAGLDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 464 (470)
Q Consensus 390 L~~NaG~d~~~~i~~l~~~~~~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~ 464 (470)
+++|+|+++..........+ .+.++|+|..+|++.||++.|++||+.|+.++++.|++++.+||++|++|...|
T Consensus 182 ~~~nag~~~~~~~~~~~~~~-~~~~~g~d~~~g~~~D~~e~Giidp~~V~~~a~~~A~~~a~~iL~~d~~I~~~p 255 (255)
T d1we3a1 182 IAENAGYEGSVIVQQILAET-KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKP 255 (255)
T ss_dssp HHHHHTSCHHHHHHHHHHCC-SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECS
T ss_pred HHhhcccccceeeeeeeecc-cCCceeEEeeccEEeehhhcCCcCchHhhHHHHHHHHHHhchHhhcchhhhcCC
Confidence 99999999987777766554 345789999999999999999999999999999999999999999999998765
No 10
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.63 E-value=3.2e-17 Score=131.85 Aligned_cols=99 Identities=16% Similarity=0.107 Sum_probs=89.9
Q ss_pred cHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC---CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCC
Q 012122 82 DKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP---EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD 158 (470)
Q Consensus 82 ~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~---~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~ 158 (470)
|++.|.++|+|+++||+.+.+.++|++++++|+..+.+. ...+|+++|+|+++.||++.||++++|+++++ ++.
T Consensus 2 D~e~L~~va~Tsl~~K~~~~~~d~ls~l~vdAv~~v~~~~~g~~~~d~~~I~i~k~~Ggs~~dS~lv~G~vl~k---~~~ 78 (105)
T d1a6da3 2 DDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISAVSILI---RGG 78 (105)
T ss_dssp CHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESCEEEEE---CCS
T ss_pred cHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHhccccCCCceecHHHhhhhhccCCChhheeeeeccceec---cCC
Confidence 788999999999999999999999999999999998643 23689999999999999999999999999986 678
Q ss_pred CccccccceeEEeeecccccccccc
Q 012122 159 MKRRAENCYILTCNVSLEYEKSEVN 183 (470)
Q Consensus 159 ~~~~~~~~kI~l~~~~L~~~~~~~~ 183 (470)
||+.++|+||++++++++..+++.+
T Consensus 79 mp~~~~~~kialld~~~~~~~te~~ 103 (105)
T d1a6da3 79 TDHVVSEVERALNDAIRVVAITKED 103 (105)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCcCeeEecchhhccccccc
Confidence 9999999999999999988776654
No 11
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.60 E-value=6.3e-17 Score=130.88 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=88.2
Q ss_pred CcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC---CccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC
Q 012122 81 PDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP---EEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP 157 (470)
Q Consensus 81 ~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~---~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~ 157 (470)
.|++.|.++|+|+++||+.+.+.++|++++++|+..+.+. +..+|+++|+|.|++||++.||++++|++|++ ++
T Consensus 4 ~D~e~L~~va~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~~~~~~~d~~~Iki~K~~Ggsv~dS~lv~G~vl~k---~~ 80 (107)
T d1q3qa3 4 DDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVKAVTILI---RG 80 (107)
T ss_dssp TCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEEEE---EE
T ss_pred cHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhcccCCCcccchHHEEEEEecCCChhhCEEEccEEEEc---cC
Confidence 3788999999999999999999999999999999998753 23578899999999999999999999999987 56
Q ss_pred CCccccccceeEEeeecccccccc
Q 012122 158 DMKRRAENCYILTCNVSLEYEKSE 181 (470)
Q Consensus 158 ~~~~~~~~~kI~l~~~~L~~~~~~ 181 (470)
.||+.++|+||++++|||+....+
T Consensus 81 ~mp~~i~n~ki~lld~~le~~~~~ 104 (107)
T d1q3qa3 81 GTEHVIDEVERALEDAVKVVKDVM 104 (107)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCcCEeeccCcHHHHhhc
Confidence 899999999999999999876543
No 12
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.52 E-value=2e-16 Score=127.69 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=82.7
Q ss_pred cHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCC---CccccccceEEEEecCCCcCCcEEEEeEEE-----ecC
Q 012122 82 DKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKP---EEAIDLFMVELMHMRHKFDVDTRLVEGLVL-----DHG 153 (470)
Q Consensus 82 ~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~---~~~~~~~~i~i~~i~G~~~~~s~li~G~vl-----~~~ 153 (470)
|++.|.++|+|+++||+.+.+.++|++++++|+..+.+. ...+|+++|+|.|++||++.||++++|+++ ++.
T Consensus 4 D~e~L~~va~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~~~~~~~d~~~IkI~k~~Ggs~~dS~li~G~v~~~~~~~k~ 83 (107)
T d1a6db3 4 EKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINKAVSILVRGETE 83 (107)
T ss_dssp HHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESSCEEEEEEESSH
T ss_pred hHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHhhcccCCCcccCHHHeEEEeecCCChhhcEEEeccceeeccCCce
Confidence 788999999999999999999999999999999998643 236889999999999999999999999776 333
Q ss_pred CCCCCCccccccceeEEeeeccc
Q 012122 154 SRHPDMKRRAENCYILTCNVSLE 176 (470)
Q Consensus 154 ~~~~~~~~~~~~~kI~l~~~~L~ 176 (470)
..++.||+.++|+ |++++||||
T Consensus 84 ~~~~~Mpk~i~n~-I~lld~~LE 105 (107)
T d1a6db3 84 HVVDEMERSITDS-LHVVASALE 105 (107)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHH
T ss_pred eccCCCCccccCc-EEEEecCCc
Confidence 3457899999998 999999986
No 13
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.48 E-value=3.3e-14 Score=133.04 Aligned_cols=144 Identities=19% Similarity=0.253 Sum_probs=116.0
Q ss_pred CCCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcC
Q 012122 316 GPNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAG 395 (470)
Q Consensus 316 g~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG 395 (470)
|.+...+.+-.+...+++.........| ++||||.+.++++..| ... ....+.+++++.++.+|++.|.++++.|+|
T Consensus 109 G~~p~~i~~g~~~a~~~v~~~l~~~a~~-i~~~g~~al~~~~~~l-~~~-~~~~~d~~~G~~iv~~Al~~p~~~i~~naG 185 (252)
T d1ioka1 109 GMNPMDLKRGIDVATAKVVEAIKSAARG-IVVGGGVALVQGAKVL-EGL-SGANSDQDAGIAIIRRALEAPMRQIAENAG 185 (252)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHTTCBC-EEETTTHHHHHHGGGG-GSC-CCSSHHHHHHHHHHHHHTTHHHHHHHHHHT
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhcCC-CCCchHHhhHHHHHHH-Hhh-hcccchHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5566555444444444443333444456 9999999999998877 432 233567899999999999999999999999
Q ss_pred CCHHHHHHHHHHhccCCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCc
Q 012122 396 LDTQDVIIALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 464 (470)
Q Consensus 396 ~d~~~~i~~l~~~~~~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~ 464 (470)
.++..++.+.... ....+|+|..+++++||++.||+||+.|...+|..|++++.+||++|.+|...|
T Consensus 186 ~dg~~vv~~~~~~--~~~~~g~~~~~~~~g~~~~~GiidP~kVt~~al~~A~sva~~lltte~~i~~~p 252 (252)
T d1ioka1 186 VDGAVVAGKVRES--SDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 252 (252)
T ss_dssp SCHHHHHHHHHSC--CSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC
T ss_pred CCcceEEEeeccc--CcCCEEEEceeeeEeeeecccccCcHHHHHHHHHHHHhhhhHHHhhceeeecCC
Confidence 9999888887653 246799999999999999999999999999999999999999999999987654
No 14
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=99.40 E-value=7.7e-13 Score=123.57 Aligned_cols=113 Identities=19% Similarity=0.286 Sum_probs=95.6
Q ss_pred CcccCh----HHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCccc
Q 012122 1 MQIQNP----TAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 76 (470)
Q Consensus 1 ~~~~hP----~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~ 76 (470)
++++|| +++++++++.++++.+||||||.++|++++++++.+++..|+||..|.+|++.|.+.+++.|++++.++.
T Consensus 59 i~~~d~~e~~~a~~~~~~a~~~~~~~GDgttt~~vla~~ll~~~~~~i~~G~~p~~i~~gi~~a~~~v~~~L~~~s~~i~ 138 (252)
T d1kp8a1 59 IELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVGVV 138 (252)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCEE
T ss_pred ccccchHHHHHHHHHHHHHHhhhHHhccccchhHHHHHHHHHHHHHHHHcCCcchhhhhhhhhHHHHHHHHHHhcceeec
Confidence 467889 9999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcHHHHHHHHhHhccccccchhhhhHHHHHHHHhhh
Q 012122 77 MGDEPDKEILKMVARTTLRTKLYESLADQLTDIVVNAVLC 116 (470)
Q Consensus 77 ~~~~~~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~ 116 (470)
..+...+..++.++...|..+...+.-..++.+|+..
T Consensus 139 ---~~~~~~~v~~~~~~~~~k~~n~d~~iG~~Iv~~Al~~ 175 (252)
T d1kp8a1 139 ---AGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEA 175 (252)
T ss_dssp ---ETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTH
T ss_pred ---cCchhhhhHHHHHhhhhcccCccHHHhHHHHHHHHHH
Confidence 2234456666666666666555556666777777643
No 15
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=99.38 E-value=4.3e-13 Score=113.29 Aligned_cols=121 Identities=19% Similarity=0.358 Sum_probs=94.5
Q ss_pred eEEEecCCCCCC-------CccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 012122 147 GLVLDHGSRHPD-------MKRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKV 219 (470)
Q Consensus 147 G~vl~~~~~~~~-------~~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~ 219 (470)
|+.|+++|.+|+ |..+++||.|++++..|+ +.+++ +++++..
T Consensus 1 G~~~d~Gy~Sp~Fvtd~~~~~~~l~~p~ILi~d~kI~-------------~~~~i------------------lp~Le~~ 49 (145)
T d1srva_ 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVS-------------NVREL------------------LPILEQV 49 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEEC-------------CHHHH------------------HHHHHHH
T ss_pred CCccccCccCCccccCcccCEEEecCceeeecccccc-------------cHHHH------------------HHHHHHH
Confidence 889999999985 455788999999998873 23333 2222222
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHcC------cEEEecCC-----hhhHHHHHHHhCCeeccc-----CCCCCCCCCc
Q 012122 220 CSGNDNNFVVINQKGIDPLSLDLLARAG------IIALRRAK-----RRNMERLVLACGGEAVNS-----VDDLTPGCLG 283 (470)
Q Consensus 220 ~~~~~~~~vIi~~~~i~~~~l~~l~~~~------I~~v~~v~-----~~~l~~i~~~tGa~ii~~-----~~~l~~~~lG 283 (470)
. ++++|++|+++ +|++.|++.|..|+ +.+++... ++.|++||.+|||+++++ +++.+..++|
T Consensus 50 ~-~~~rPLlIIA~-di~~eaL~~Lv~N~~~g~l~v~aVkaP~fG~~r~~~L~DlAi~tGa~v~~~~~g~~l~~~~~~~LG 127 (145)
T d1srva_ 50 A-QTGKPLLIIAE-DVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLG 127 (145)
T ss_dssp H-TTTCCEEEEES-EECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCE
T ss_pred H-HhCCcEEEEeC-ccCHHHHHHHHHHHhcCceEEEEEeCCCccHHHHHHHhhhhhhhCCEeeccccCcccccCCHHHCC
Confidence 2 35679999998 99999999999883 68888874 789999999999999974 5667788999
Q ss_pred ccceEEEEEECCeeEEEEEc
Q 012122 284 WAGLVYEHVLGEEKYTFVEN 303 (470)
Q Consensus 284 ~~~~v~~~~ig~~~~~~~~~ 303 (470)
+|+++. ++.++.+++.|
T Consensus 128 sa~kv~---vtkd~T~ii~G 144 (145)
T d1srva_ 128 RAERVR---ITKDETTIVGG 144 (145)
T ss_dssp EEEEEE---ECSSCEEEEEE
T ss_pred cccEEE---EeCCccEEeCC
Confidence 999997 77887777654
No 16
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=99.37 E-value=5.5e-13 Score=118.43 Aligned_cols=144 Identities=17% Similarity=0.301 Sum_probs=104.3
Q ss_pred EEEEeEEEecCCCCCCC-------ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012122 143 RLVEGLVLDHGSRHPDM-------KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIEL 215 (470)
Q Consensus 143 ~li~G~vl~~~~~~~~~-------~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~ 215 (470)
++.+|+.|+++|.+|+| ...++||+|++++..+ ++.+++..++ +...
T Consensus 5 ~~tEG~~~d~Gy~SpyFvtd~~~~~~~l~~p~ILitd~kI-------------~~~~~i~p~L-----------e~~~-- 58 (193)
T d1kida_ 5 RGSEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI-------------SNIREMLPVL-----------EAVA-- 58 (193)
T ss_dssp SCCCCEEESCCCSCGGGCCBTTTTBEEEESCEEEEBSSEE-------------CCHHHHHHHH-----------HHHH--
T ss_pred cccCCeeecCCcCCccceeCCCCCEEEecCcEEEEEcCCc-------------ccHHHHHHHH-----------HHHH--
Confidence 45679999999999854 4578899999999877 3444444332 2222
Q ss_pred cccccCCCCCceEEEecCCCCHHHHHHHHHc------CcEEEecC-----ChhhHHHHHHHhCCeeccc-----CCCCCC
Q 012122 216 KNKVCSGNDNNFVVINQKGIDPLSLDLLARA------GIIALRRA-----KRRNMERLVLACGGEAVNS-----VDDLTP 279 (470)
Q Consensus 216 ~~~~~~~~~~~~vIi~~~~i~~~~l~~l~~~------~I~~v~~v-----~~~~l~~i~~~tGa~ii~~-----~~~l~~ 279 (470)
+++.|++||++ +|++.|++.|..| .+++|+.. +++.|++||.+|||++++. +.+++.
T Consensus 59 ------~~~~pLlIIA~-di~~~aL~~Lv~N~~kg~l~v~aVkaPgfG~~r~~~LeDlA~~TGa~vi~~~~g~~l~~~~~ 131 (193)
T d1kida_ 59 ------KAGKPLLIIAE-DVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATL 131 (193)
T ss_dssp ------HHTCCEEEEES-EECHHHHHHHHHHHHTTSCCEEEEECCSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCG
T ss_pred ------hhCCcEEEEec-cccHHHHHHHHHhhhccCcceeeccCCCcChhHHHHHHHHHHHcCCEEechhcccccccCCH
Confidence 23468999997 9999999999998 36778876 4688999999999999984 667788
Q ss_pred CCCcccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCHHHHHHHHHHHHhHHH
Q 012122 280 GCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 334 (470)
Q Consensus 280 ~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~~~l~e~~~~l~dal~ 334 (470)
+++|+|.++. ++.++.+++. ++.+...++++...+..-+.
T Consensus 132 ~~LG~~~kv~---itk~~T~ii~------------g~g~~~~I~~Ri~~Lk~~l~ 171 (193)
T d1kida_ 132 EDLGQAKRVV---INKDTTTIID------------GVGEEAAIQGRVAQIRQQIE 171 (193)
T ss_dssp GGCEEEEEEE---ECSSCEEEEE------------ECCCHHHHHHHHHHHHHHHH
T ss_pred hHcCcccEEE---EecCceEEEc------------CCCCHHHHHHHHHHHHHHHH
Confidence 8999999987 5554433332 23355566666665555443
No 17
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.34 E-value=3.1e-12 Score=112.83 Aligned_cols=140 Identities=18% Similarity=0.334 Sum_probs=102.9
Q ss_pred eEEEecCCCCCCC-------ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 012122 147 GLVLDHGSRHPDM-------KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNKV 219 (470)
Q Consensus 147 G~vl~~~~~~~~~-------~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~~ 219 (470)
|+.|+++|.+|+| ...++||.|++++..++. .+++..+ ++...
T Consensus 1 G~~~d~Gy~Sp~Fvt~~~~~~~~~~~p~ili~d~ki~~-------------~~~i~p~-----------Le~~~------ 50 (184)
T d1sjpa2 1 GMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVST-------------VKDLLPL-----------LEKVI------ 50 (184)
T ss_dssp EEEESCCBSCGGGCSBTTTTBEEEESCEEEEESSCBCC-------------STTTHHH-----------HHHHH------
T ss_pred CCccCcCccCcccccCCCCCEEEecCCEEEEecCccCc-------------HHHHHHH-----------HHHhh------
Confidence 8999999998854 457889999999987732 2222222 22222
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHc------CcEEEecCC-----hhhHHHHHHHhCCeecc-----cCCCCCCCCCc
Q 012122 220 CSGNDNNFVVINQKGIDPLSLDLLARA------GIIALRRAK-----RRNMERLVLACGGEAVN-----SVDDLTPGCLG 283 (470)
Q Consensus 220 ~~~~~~~~vIi~~~~i~~~~l~~l~~~------~I~~v~~v~-----~~~l~~i~~~tGa~ii~-----~~~~l~~~~lG 283 (470)
++++|++|+++ +|++.|++.|..| .+++|+... ++.|++||.+|||++++ ++++++.+++|
T Consensus 51 --~~~rPLlIIA~-di~~~aL~~Lv~N~~~g~l~v~aVkaPgfG~~r~~~L~DlA~~TGa~vi~~~~g~~l~~~~~~~LG 127 (184)
T d1sjpa2 51 --GAGKPLLIIAE-DVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLG 127 (184)
T ss_dssp --TTTCCEEEEES-CBCHHHHHHHHHHHHTTSSCCEEEECSSCHHHHHHHHHHHHHHHTCCEEBTTTTBCSSSCCTTTSE
T ss_pred --ccCCcEEEEcc-hhhHHHHHHHHHHHhcCchheecccCCCCCcchHHHHHHHHHHhCCEEecccccccccccchhhCC
Confidence 34679999998 9999999999998 368888874 78899999999999998 46778889999
Q ss_pred ccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCHHHHHHHHHHHHhHHH
Q 012122 284 WAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 334 (470)
Q Consensus 284 ~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~~~l~e~~~~l~dal~ 334 (470)
+|.++. +..++.+++. .+.....++++...+...+.
T Consensus 128 ~~~kv~---itk~~T~ii~------------~~g~~~~I~~Ri~~Lk~~l~ 163 (184)
T d1sjpa2 128 KARKVV---VTKDETTIVE------------GAGDTDAIAGRVAQIRQEIE 163 (184)
T ss_dssp EEEEEE---ECSSCEEEEE------------ECCCHHHHHHHHHHHHHHHH
T ss_pred eeeEEE---EecCceEEec------------CCCCHHHHHHHHHHHHHHHH
Confidence 999997 6555544432 23355566776666655554
No 18
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.33 E-value=5.7e-13 Score=116.60 Aligned_cols=141 Identities=19% Similarity=0.358 Sum_probs=83.3
Q ss_pred EeEEEecCCCCCCC-------ccccccceeEEeeecccccccccccceeecCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 012122 146 EGLVLDHGSRHPDM-------KRRAENCYILTCNVSLEYEKSEVNAGFFYSNAEQREAMVAAERRQVDEKVRRIIELKNK 218 (470)
Q Consensus 146 ~G~vl~~~~~~~~~-------~~~~~~~kI~l~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~v~~i~~~~~~ 218 (470)
+|+.|+++|.+|+| ...++||+|++++.+|+. ++.|+++++.
T Consensus 1 EG~~~d~Gy~SpyFvtd~~~~~~~l~np~ILi~d~kI~~-------------------------------~~~i~p~Le~ 49 (176)
T d1ioka2 1 EGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSS-------------------------------LQPMVPLLES 49 (176)
T ss_dssp CCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC-------------------------------CCC-------
T ss_pred CCcccccCccCccceeCCcCCEEEeeCcEEEEEccccCc-------------------------------HHHHHHHHHH
Confidence 59999999999854 456889999999998842 1222333322
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHcC------cEEEecC-----ChhhHHHHHHHhCCeeccc-----CCCCCCCCC
Q 012122 219 VCSGNDNNFVVINQKGIDPLSLDLLARAG------IIALRRA-----KRRNMERLVLACGGEAVNS-----VDDLTPGCL 282 (470)
Q Consensus 219 ~~~~~~~~~vIi~~~~i~~~~l~~l~~~~------I~~v~~v-----~~~~l~~i~~~tGa~ii~~-----~~~l~~~~l 282 (470)
.. ++++|++|||+ +|++.|++.|..|. +++|+.. +++.|++||.+|||++++. +++++.+++
T Consensus 50 ~~-~~~~PLlIIA~-di~~~aL~~Lv~N~~~g~l~v~aVkaP~fG~~r~~~LeDlA~~tGa~vi~~~~g~~l~~~~~~~L 127 (176)
T d1ioka2 50 VI-QSQKPLLIVAE-DVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDML 127 (176)
T ss_dssp -----CCCCEEEES-CBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTS
T ss_pred HH-hcCCcEEEEec-CCCHHHHHHHHHHHhcCCceEEEEeCCCCCcHHHHHHHHHHHhhCCEEEecccCCChhhCCHHHC
Confidence 22 35679999998 99999999999983 5788876 3678999999999999984 677888899
Q ss_pred cccceEEEEEECCeeEEEEEccCCCCeeEEEeeCCCHHHHHHHHHHHHhHHH
Q 012122 283 GWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLR 334 (470)
Q Consensus 283 G~~~~v~~~~ig~~~~~~~~~~~~~~~~TIii~g~t~~~l~e~~~~l~dal~ 334 (470)
|+|+++. +..++++++ =++.....++++.+.++..+.
T Consensus 128 G~a~kv~---vtk~~T~ii------------~g~g~~~~i~~Ri~~Lk~~i~ 164 (176)
T d1ioka2 128 GRAKKVS---INKDNTTIV------------DGAGEKAEIEARVSQIRQQIE 164 (176)
T ss_dssp EEEEEEE---ECSSCEEEE------------SCCCCHHHHHHHHHHHHHHHT
T ss_pred ceeeEEE---EecCceEEE------------cCCCCHHHHHHHHHHHHHHHH
Confidence 9999997 555443333 234566777777777766553
No 19
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.17 E-value=9.5e-11 Score=109.11 Aligned_cols=108 Identities=21% Similarity=0.255 Sum_probs=89.0
Q ss_pred ChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCcccCCCCCcHH
Q 012122 5 NPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKE 84 (470)
Q Consensus 5 hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~~~~~~~~~ 84 (470)
|++++++.+++.++++++||||||.++|+.+|++++.+++..|+||..+.+|++.+.+.+++.|++++.++. ..+..
T Consensus 67 ~~~a~l~~~~a~~~~~~~gDgttt~~vla~~ll~~g~~~l~~G~~p~~i~~g~~~a~~~v~~~l~~~a~~i~---~~g~~ 143 (252)
T d1ioka1 67 NMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARGIV---VGGGV 143 (252)
T ss_dssp HHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCEE---ETTTH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHcCCCcchhhhhHHHHHHHHHHHHHHhcCCCC---CchHH
Confidence 349999999999999999999999999999999999999999999999999999999999999999998885 22445
Q ss_pred HHHHHHhHhccccccchhhhhHHHHHHHHhh
Q 012122 85 ILKMVARTTLRTKLYESLADQLTDIVVNAVL 115 (470)
Q Consensus 85 ~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~ 115 (470)
.+.+++++..+.+..+...+.-..++.+|+.
T Consensus 144 al~~~~~~l~~~~~~~~d~~~G~~iv~~Al~ 174 (252)
T d1ioka1 144 ALVQGAKVLEGLSGANSDQDAGIAIIRRALE 174 (252)
T ss_dssp HHHHHGGGGGSCCCSSHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHhhhcccchHHHHHHHHHHHHH
Confidence 6777776655544433334444566666664
No 20
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=99.14 E-value=9.8e-11 Score=108.99 Aligned_cols=133 Identities=16% Similarity=0.222 Sum_probs=109.7
Q ss_pred HHHHHhHHHHHHHHhh---cCccccCCChHHHHHHHHHHHHHhccccchhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHH
Q 012122 326 KDAVRDGLRAVKNTIE---DEAVVLGAGAFEVAARQYLVNEVKKTVEGRAQLGVEAFADALLVVPKTLAENAGLDTQDVI 402 (470)
Q Consensus 326 ~~~l~dal~~~~~~~~---~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~NaG~d~~~~i 402 (470)
++.++.|...+...++ .+ +.+|++....+++..+ ... +...+.++++...+.+||+.|.++++.|+|.++...+
T Consensus 116 ~~gi~~a~~~v~~~L~~~s~~-i~~~~~~~~v~~~~~~-~~~-k~~n~d~~iG~~Iv~~Al~~p~~~i~~nag~~g~~~~ 192 (252)
T d1kp8a1 116 KRGIDKAVTVAVEELKALSVG-VVAGGGVALIRVASKL-ADL-RGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVA 192 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHCBC-EEETTTHHHHHHHHHT-TTC-CCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHH
T ss_pred hhhhhhHHHHHHHHHHhccee-eccCchhhhhHHHHHh-hhh-cccCccHHHhHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 3444444444444443 35 9999999999998877 432 2235688999999999999999999999999999888
Q ss_pred HHHHHhccCCCeeeEEccCCCccCcccCCcccchHHHHHHHHHHHHHHHHHhhhhHhhhcCc
Q 012122 403 IALKGEHDRGNIVGLNQHSGDPIDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGR 464 (470)
Q Consensus 403 ~~l~~~~~~~~~~gid~~~~~~~d~~~~gI~dp~~vk~~~l~~a~e~a~~lL~id~ii~~~~ 464 (470)
..+... ..++|+|..++.++|+++.|++||+.|...+++.|..++.+||.+|..|...|
T Consensus 193 ~~v~~~---~~~~g~~~~~~~~g~~~~~G~idP~~Vt~~al~~a~~~~~~iL~te~~i~~~p 251 (252)
T d1kp8a1 193 NTVKGG---DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 251 (252)
T ss_dssp HHHHHS---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC
T ss_pred eeeeec---CCCeeEEEEEEEEEEEEeeccCCcceeccHhhhhheeccceeEeecccccCCC
Confidence 887542 45789999999999999999999999999999999999999999999987755
No 21
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=98.90 E-value=2.6e-09 Score=99.38 Aligned_cols=74 Identities=24% Similarity=0.458 Sum_probs=71.2
Q ss_pred ccChHHHHHHHHHhhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhccCccc
Q 012122 3 IQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV 76 (470)
Q Consensus 3 ~~hP~a~ll~~~~~~~~~~~GDGTtt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~s~~~~ 76 (470)
++||+++++.+++.++++.+||||||.++|++++++++..++..|.||..+++|++.+.+.+++.|++++.+..
T Consensus 64 ~e~~~a~~~~~~~~~~~~~~gDgttt~~vl~~~~l~~~~~~i~~G~~~~~i~~g~~~a~~~al~~l~~~~~~~~ 137 (255)
T d1we3a1 64 LENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVG 137 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC
T ss_pred hhhhHHHHHHHhhhhhHHHhhcchhHHHHHHHHHHHhhhhHHhcCCccchhhhhhhhhhHHHHHHHHHHhhhcc
Confidence 37999999999999999999999999999999999999999999999999999999999999999999988764
No 22
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=95.16 E-value=0.00024 Score=53.26 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=46.8
Q ss_pred cHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCCCcc
Q 012122 82 DKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPDMKR 161 (470)
Q Consensus 82 ~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~~~~ 161 (470)
+.+.+.+||..|.+.+ .+.+++.+|+.++.+.+ .+ -+..-. +.....++++|+.|+++|.+|+|.+
T Consensus 4 ~~e~i~~VAtISa~D~-------~iG~lIa~A~~kVG~dG-vI-----tvEe~~-~~~t~le~veG~~~d~Gy~Sp~fvt 69 (89)
T d1sjpa3 4 TKEQIAATAAISAGDQ-------SIGDLIAEAMDKVGNEG-VI-----TVEESN-TFGLQLELTEVAVIKAGAATEVELK 69 (89)
T ss_dssp SHHHHHHHHHHHTTCH-------HHHHHHHHHHHHSCTTS-CE-----EEEEES-SSSEEEEEESEEEEEEECSSHHHHH
T ss_pred CHHHHHHhhheecCCH-------HHHHHHHHHHHhcCCCC-ce-----EEEecc-ccceEEEEEEEEEecCCccCceEEc
Confidence 6778999998776543 45666777777665431 11 111111 2334567889999999999886522
Q ss_pred --------ccccceeEEe
Q 012122 162 --------RAENCYILTC 171 (470)
Q Consensus 162 --------~~~~~kI~l~ 171 (470)
.++||+|++.
T Consensus 70 d~k~r~e~~l~~p~ili~ 87 (89)
T d1sjpa3 70 ERKHRIEDAVRNAKAAVE 87 (89)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ccHHhhHHHHhCceEeee
Confidence 2456666654
No 23
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]}
Probab=88.79 E-value=0.016 Score=42.57 Aligned_cols=58 Identities=16% Similarity=0.301 Sum_probs=34.1
Q ss_pred cHHHHHHHHhHhccccccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecC-CCcCCcEEEEeEEEecCC
Q 012122 82 DKEILKMVARTTLRTKLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRH-KFDVDTRLVEGLVLDHGS 154 (470)
Q Consensus 82 ~~~~l~~va~tsl~sk~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G-~~~~~s~li~G~vl~~~~ 154 (470)
|.+.|.+||..|.|.+ .+-+|+.+|+-++...+ .+. +.. | +.....++++|+.+++++
T Consensus 2 d~~~i~~VAtISAnD~-------~iG~lIAeA~~kVG~dG-vIt-----VEe--s~t~~t~levveG~~~~~s~ 60 (86)
T d1we3a3 2 DRKAIEEVATISANDP-------EVGKLIADAMEKVGKEG-IIT-----VEE--SKSLETELKFVGVAVIRVGA 60 (86)
T ss_dssp SHHHHHHHHHHHHTCH-------HHHHHHHHHHHTTCTTS-EEE-----EEE--CSSSSCEEEEECEEEEEECC
T ss_pred CHHHHhhheeeecCCH-------HHHHHHHHHHHHcCCCc-eEE-----EEe--cCCCCeEEEEEEeeecccce
Confidence 5778999998776642 45566666666664431 111 111 1 233455688999888654
No 24
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]}
Probab=88.13 E-value=0.0098 Score=45.04 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=38.8
Q ss_pred cHHHHHHHHhHhccc--cccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCCC
Q 012122 82 DKEILKMVARTTLRT--KLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHPD 158 (470)
Q Consensus 82 ~~~~l~~va~tsl~s--k~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~~ 158 (470)
+.+.+.+||..|.|+ .++..+++.+.+++.++++.+.+++ +......+.+|+.|++++.+|.
T Consensus 4 ~~~~i~~VAtISan~D~~iG~lIa~a~~~vg~dGvitvee~~---------------~~~~~~~ivEG~~~d~G~vS~~ 67 (97)
T d1kp8a3 4 DSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGT---------------GLQDELDVVERVAKLAGGVAVI 67 (97)
T ss_dssp SHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCS---------------SSSCEEEEEHHHHHHHHCEEEE
T ss_pred CHHHHhhheeEecCCcHHHHHHHHHHHHHhcccceEEEeccc---------------cchhHHHHHHHHHhhcCCccce
Confidence 788999999999875 2334444444444444444443321 3344566889999999987653
No 25
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=86.32 E-value=0.56 Score=34.86 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.8
Q ss_pred CCCeeEEEeeCCCHHHHHHHHHHHHhHHHHHHHHhh
Q 012122 306 NPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIE 341 (470)
Q Consensus 306 ~~~~~TIii~g~t~~~l~e~~~~l~dal~~~~~~~~ 341 (470)
......+.+.++++.+++|.+.++.|||+++|++++
T Consensus 61 ~GyiS~~fv~~~t~~E~~ekk~~veDAl~a~raa~~ 96 (97)
T d1ioka3 61 AGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQ 96 (97)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccCCCceeeeeeccceeecCHHHHHHHhc
Confidence 356788999999999999999999999999999876
No 26
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=81.71 E-value=0.014 Score=43.99 Aligned_cols=61 Identities=11% Similarity=0.188 Sum_probs=36.2
Q ss_pred cHHHHHHHHhHhccc--cccchhhhhHHHHHHHHhhhhcCCCccccccceEEEEecCCCcCCcEEEEeEEEecCCCCC
Q 012122 82 DKEILKMVARTTLRT--KLYESLADQLTDIVVNAVLCIRKPEEAIDLFMVELMHMRHKFDVDTRLVEGLVLDHGSRHP 157 (470)
Q Consensus 82 ~~~~l~~va~tsl~s--k~~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~i~i~~i~G~~~~~s~li~G~vl~~~~~~~ 157 (470)
+.+.+.+||..|.|+ .++..+++.+.+++.++++.+.+++ +.....++++|+.|++++.+|
T Consensus 4 ~~~~i~~VAtISan~d~~IG~lIa~a~~~Vg~~GvitvEe~~---------------~~~t~~~ivEG~~~~~GyiS~ 66 (97)
T d1ioka3 4 DSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENK---------------GMETEVEVVERVAKLAGGVAV 66 (97)
T ss_dssp STTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECS---------------SSCCEEEEEHHHHTTSSCEEE
T ss_pred CHHHhheeeeeecCCchHHHHHHHHHHHHhCCCceEEecccc---------------chhhhhhHhhhhhhhhccccc
Confidence 556788999888864 2444444444444444444443321 222334688999999888665
No 27
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]}
Probab=80.80 E-value=1 Score=33.37 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=31.8
Q ss_pred CeeEEEeeCCCHHHHHHHHHHHHhHHHHHHHHhhc
Q 012122 308 HSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIED 342 (470)
Q Consensus 308 ~~~TIii~g~t~~~l~e~~~~l~dal~~~~~~~~~ 342 (470)
....+.+.++++.+++|.+.+++|+|+++|+++++
T Consensus 63 ~vS~~fvt~~te~E~~ekk~~veDaL~a~~aA~~e 97 (97)
T d1kp8a3 63 GVAVIKVGAATEVEMKEKKARVEDALHATRAAVEE 97 (97)
T ss_dssp CEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeecCcchhhhhhceeEEechHHHHHHHhcC
Confidence 56788999999999999999999999999999863
No 28
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=59.97 E-value=31 Score=25.84 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHHHHHHHH--HHHhccccchhHHHHHHHHHHHhHhHHHHHH
Q 012122 321 TIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVAARQYLV--NEVKKTVEGRAQLGVEAFADALLVVPKTLAE 392 (470)
Q Consensus 321 ~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~--~~~~~~~~~~~~~~i~~fa~aL~~ip~~L~~ 392 (470)
.++.....+..=+...+.++.+|...|| |.-|..+..-|. ++.++...+.+.--+...++-++.+...|+.
T Consensus 13 ~mkka~~~i~~kleqA~~WL~dP~~~~g-g~Ge~AiR~il~earkva~~~~~~~r~~Il~~c~ei~~lt~qLad 85 (119)
T d1st6a3 13 AMKRALALIDSKMNQAKGWLRDPNAPPG-DAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLAD 85 (119)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHSTTSCST-TTTHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCcCCCCC-CccHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666677778889999988887 777877766652 2345556677777778888888888888876
No 29
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=35.04 E-value=14 Score=26.60 Aligned_cols=36 Identities=25% Similarity=0.440 Sum_probs=28.7
Q ss_pred ecCChhhHHHHHHHhCCeecccCCCCCCCCCcccceE
Q 012122 252 RRAKRRNMERLVLACGGEAVNSVDDLTPGCLGWAGLV 288 (470)
Q Consensus 252 ~~v~~~~l~~i~~~tGa~ii~~~~~l~~~~lG~~~~v 288 (470)
-.+++++|+.+...+||++++++..++... |.-.-|
T Consensus 14 t~mt~d~Le~mv~lCGAsVvk~~~~l~~~~-~~~~vi 49 (97)
T d1l0ba2 14 TNMPKDELERMLQLCGASVVKELPLLTRDT-GAHPIV 49 (97)
T ss_dssp SSSCHHHHHHHHHHTTCEEECSSSCGGGCC-SSCCEE
T ss_pred cCCCHHHHHHHHHHcCceeecChhhcCCCC-CCeeEE
Confidence 356899999999999999999988877555 554444
No 30
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=34.11 E-value=39 Score=24.92 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=31.1
Q ss_pred eEEEecCCCCHHHHHHHHHcCcEEEecCChhhHHHHHHHhCC
Q 012122 227 FVVINQKGIDPLSLDLLARAGIIALRRAKRRNMERLVLACGG 268 (470)
Q Consensus 227 ~vIi~~~~i~~~~l~~l~~~~I~~v~~v~~~~l~~i~~~tGa 268 (470)
.+|+|. .|.+.+.+.|.++||-++......--+.|.....+
T Consensus 67 d~vi~~-~iG~~~~~~L~~~GI~v~~~~~~~v~eal~~~~~g 107 (124)
T d1eo1a_ 67 KAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEG 107 (124)
T ss_dssp CEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTT
T ss_pred CEEEEC-CCCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhC
Confidence 588886 89999999999999999986655433445544444
No 31
>d1cf7b_ a.4.5.17 (B:) Cell cycle transcription factor DP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.28 E-value=34 Score=23.74 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHH
Q 012122 319 DHTIAQIKDAVRDGLRAVKNT 339 (470)
Q Consensus 319 ~~~l~e~~~~l~dal~~~~~~ 339 (470)
....+-.+|++.|||+|+.+.
T Consensus 46 ~~d~KNIRRRVYDALNVLmA~ 66 (82)
T d1cf7b_ 46 AYDQKNIRRRVYDALNVLMAM 66 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcchhhhHHHHHHHHHHHHH
Confidence 456677899999999999664
No 32
>d1gnwa1 a.45.1.1 (A:86-211) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.72 E-value=58 Score=24.01 Aligned_cols=44 Identities=7% Similarity=0.063 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHhHHHHHHHHhhcCccccCCChHHHH--HHHHH
Q 012122 317 PNDHTIAQIKDAVRDGLRAVKNTIEDEAVVLGAGAFEVA--ARQYL 360 (470)
Q Consensus 317 ~t~~~l~e~~~~l~dal~~~~~~~~~~~vvpGGG~~E~~--la~~L 360 (470)
+++..+++....++.++..+...+.++.++.|..-+... ++..+
T Consensus 46 ~d~~~v~~~~~~l~~~l~~le~~L~~~~yl~Gd~~TlADi~~~~~l 91 (126)
T d1gnwa1 46 TDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAI 91 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSSSCCHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHccCCccccCccccchHHHHHHH
Confidence 568889999999999999999999988899998755444 44455
Done!