BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012124
(470 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 334 bits (857), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 242/398 (60%), Gaps = 15/398 (3%)
Query: 65 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF 124
+ L+ RV +V PS T+ I +A A+ G+ V +AGEPDF+TP I EA A+ +G
Sbjct: 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGK 60
Query: 125 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 184
TRY P AG LR AI KL+ +NGL Y D ILV+NG KQSI +LA+ PGDEVIIP
Sbjct: 61 TRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIP 120
Query: 185 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244
APFWVSYPEM ++A+ TPVILPT + F + P+ + +T K++LL+ +PSNPTG VY
Sbjct: 121 APFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVY 180
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF-ASLPGMWERTLTVNGFSKAF 303
+ + IA+ VA L VLSDEIYE I+Y A H S A+ P +ER++ +GF+K +
Sbjct: 181 TPDEVRAIAQ-VAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY 239
Query: 304 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAF 363
AMTGWR+G++AGP V A KIQ TS + +Q + V +M+ AF
Sbjct: 240 AMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQ---YGAIAAYENSQDCVQEMLAAF 296
Query: 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 423
ERR +++ + + G++ +P GAFY+F + S S C LLD+
Sbjct: 297 AERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRS----------SLDFCSELLDQH 346
Query: 424 QVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
QVA VPG AFG D CIR+SYA L T++ +ER++K L
Sbjct: 347 QVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFL 384
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 294 bits (752), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 231/397 (58%), Gaps = 20/397 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS RV A+KPS TVA+ +A L + GV ++ L AGEPDFDTP + EA A+ +G T+
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y P AG ELR A+ K + ENGLS TP++ +V+ G KQ++ A+ PGDEVI+ +P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+WVSYPEM R A V + T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFA 304
+L+ +AR+ +H LV SDEIYEH++Y H S PG E TLTVNG +KAFA
Sbjct: 184 EVLEALARLAVEHDFYLV-SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFA 237
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWR+GY GPK + A + SQ T+ +I+Q V +A+R
Sbjct: 238 MTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYR 297
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RRD L++ L G+K P GAFY+ +D S E + +E L +A
Sbjct: 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAG 345
Query: 425 VALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG F +R+SYA S L+ A+ER + L
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 230/397 (57%), Gaps = 20/397 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS RV A+KPS TVA+ +A L + GV ++ L AGEPDFDTP + EA A+ +G T+
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y P AG ELR A+ K + ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+WVSYPEM R A V + T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFA 304
+L+ +AR+ +H LV SDEIYEH++Y H S PG E TLTVNG +KAFA
Sbjct: 184 EVLEALARLAVEHDFYLV-SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFA 237
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWR+GY GPK + A + SQ T+ +I+Q V +A+R
Sbjct: 238 MTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYR 297
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RRD L++ L G+K P GAFY+ +D S E + +E L +A
Sbjct: 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAG 345
Query: 425 VALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG F +R+SYA S L+ A+ER + L
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 230/397 (57%), Gaps = 20/397 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS RV A+KPS TVA+ +A L + GV ++ L AGEPDFDTP + EA A+ +G T+
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y P AG ELR A+ K + ENGLS TP++ +V+ G KQ++ A+ PGDEVI+ +P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+WVSYPEM R A V + T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFA 304
+L+ +AR+ +H LV SDEIYEH++Y H S PG E TLTVNG + AFA
Sbjct: 184 EVLEALARLAVEHDFYLV-SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAXAFA 237
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWR+GY GPK + A + SQ T+ +I+Q V +A+R
Sbjct: 238 MTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYR 297
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RRD L++ L G+K P GAFY+ +D S E + +E L +A
Sbjct: 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAG 345
Query: 425 VALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG F +R+SYA S L+ A+ER + L
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 229/397 (57%), Gaps = 20/397 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS RV A+KPS TVA+ +A L + GV ++ L AGEPDFDTP + EA A+ +G T+
Sbjct: 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y P AG ELR A+ K + ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+WVSYPEM R A V + T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFA 304
+L+ +AR+ +H LV SDEIYEH++Y H S PG E TLTVNG +KAFA
Sbjct: 184 EVLEALARLAVEHDFYLV-SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFA 237
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWR+GY GPK + A + Q T+ +I+Q V +A+R
Sbjct: 238 MTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYR 297
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RRD L++ L G+K P GAFY+ +D S E + +E L +A
Sbjct: 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAG 345
Query: 425 VALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG F +R+SYA S L+ A+ER + L
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 227/397 (57%), Gaps = 20/397 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS RV A+KP VA+ +A L + GV ++ L AGEPDFDTP + EA A+ +G T+
Sbjct: 4 LSRRVQAMKPDAVVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y P AG ELR A+ K + ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+WVSYPEM R A V + T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFA 304
+L+ +AR+ +H LV SDEIYEH++Y H S PG E TLTVNG +KAFA
Sbjct: 184 EVLEALARLAVEHDFYLV-SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFA 237
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWR+GY GPK + A + Q T+ +I+Q V +A+R
Sbjct: 238 MTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYR 297
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RRD L++ L G+K P GAFY+ +D S E + +E L +A
Sbjct: 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAG 345
Query: 425 VALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG F +R+SYA S L+ A+ER + L
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 227/397 (57%), Gaps = 20/397 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS RV A+KP VA+ +A L + GV ++ L AGEPDFDTP + EA A+ +G T+
Sbjct: 4 LSRRVQAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTK 63
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y P AG ELR A+ K + ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+WVSYPEM R A V + T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFA 304
+L+ +AR+ +H LV SDEIYEH++Y H S PG E TLTVNG +KAFA
Sbjct: 184 EVLEALARLAVEHDFYLV-SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFA 237
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWR+GY GPK + A + Q T+ +I+Q V +A+R
Sbjct: 238 MTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYR 297
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RRD L++ L G+K P GAFY+ +D S E + +E L +A
Sbjct: 298 RRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAG 345
Query: 425 VALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG F +R+SYA S L+ A+ER + L
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 221/399 (55%), Gaps = 20/399 (5%)
Query: 66 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFT 125
+LS R+ V S+ + D A + VI L GEPDFDTP I E A+ +G T
Sbjct: 1 ALSDRLELVSASEIRKLFDIAAGMK----DVISLGIGEPDFDTPQHIKEYAKEALDKGLT 56
Query: 126 RYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIP 184
Y PN G LELR AI KLK++NG+ P +I+V GA Q+ L + A G+EV+IP
Sbjct: 57 HYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIP 116
Query: 185 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244
P +VSY +A PV +PT + F L+ L+ +T+K+R LI+ SP NPTG+V
Sbjct: 117 TPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVL 176
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
K L+EIA V +H L+V+SDE+YEH IY A H S ASL GM+ERT+TVNGFSK FA
Sbjct: 177 TKKDLEEIADFVVEHD-LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA 235
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGWRLG++A P + K Q + + Q + V +M K +
Sbjct: 236 MTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQ-YAAAKALKDERSWKAVEEMRKEYD 294
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
RR + K E+ G+ +P+GAFY+F G S+ +L +A+
Sbjct: 295 RRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIRD------TGL----TSKKFSELMLKEAR 343
Query: 425 VALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 461
VA+VPG AFG + +RISYA + L+ A+ER+++ L
Sbjct: 344 VAVVPGSAFGKAGEGYVRISYATAYEKLEEAMERMERVL 382
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 222/400 (55%), Gaps = 20/400 (5%)
Query: 65 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF 124
++LS R+ V S+ + D A + VI L GEPDFDTP I E A+ +G
Sbjct: 1 MALSDRLELVSASEIRKLFDIAAGMK----DVISLGIGEPDFDTPQHIKEYAKEALDKGL 56
Query: 125 TRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVII 183
T Y PN G LELR AI KLK++NG+ P +I+V GA Q+ L + A G+EV+I
Sbjct: 57 THYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLI 116
Query: 184 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 243
P P +VSY +A PV +PT + F L+ L+ +T+K+R LI+ SP NPTG+V
Sbjct: 117 PTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAV 176
Query: 244 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 303
K L+EIA V +H L+V+SDE+YEH IY A H S ASL GM+ERT+TVNGFSK F
Sbjct: 177 LTKKDLEEIADFVVEHD-LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTF 235
Query: 304 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAF 363
AMTGWRLG++A P + K Q + + Q + V +M K +
Sbjct: 236 AMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQ-YAAAKALKDERSWKAVEEMRKEY 294
Query: 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 423
RR + K E+ G+ +P+GAFY+F G S+ +L +A
Sbjct: 295 DRRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIRD------TGL----TSKKFSELMLKEA 343
Query: 424 QVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 461
+VA+VPG AFG + +RISYA + L+ A++R+++ L
Sbjct: 344 RVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVL 383
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 225/395 (56%), Gaps = 22/395 (5%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
+S R++ + SKT+ + +A AL + G VI L AGEPDF TP + E + +++G +
Sbjct: 14 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVK 73
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
YT G ELR I ++ E +PDQ++V+NGAKQ++ A +A+ PGDEVI+ +P
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
WVSY +A T ++ T +S+NF + +E L K++ +++ SP+NPTG VY +
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306
L+ + R+ AK ++SDE+Y+ ++Y TS + ++R + +NGFSK+ +MT
Sbjct: 194 EFLEGLVRL-AKKRNFYIISDEVYDSLVYTDE-FTSILDVSEGFDRIVYINGFSKSHSMT 251
Query: 307 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRER 366
GWR+GY+ + A +KIQS TS ++++Q S MV+ F+ER
Sbjct: 252 GWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDN------SYMVQTFKER 305
Query: 367 RDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 426
++F+V+ ++ GVK EP+GAFYLF F + C LL++ +VA
Sbjct: 306 KNFVVERLKKM-GVKFVEPEGAFYLF-------------FKVRGDDVKFCERLLEEKKVA 351
Query: 427 LVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
LVPG AF +R+S+A S+ L A++RI+ L
Sbjct: 352 LVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFL 386
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 189/397 (47%), Gaps = 32/397 (8%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
LS R+ + + + I A L G VI L GEPDF+TP I + GI +++EG T
Sbjct: 2 LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTH 61
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
YT + G LELR I K++ PD I+++ G+ + A+ ++ GDEV+I P
Sbjct: 62 YTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNP 121
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
+ Y R A PV + LE L++K++ +I+ SPSNP G V +
Sbjct: 122 CYPCYKNFIRFLGAKPVFCDFTVES--------LEEALSDKTKAIIINSPSNPLGEVIDR 173
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306
+ + A ++SDEIY ++Y +++ + E+T+ +NGFS +AMT
Sbjct: 174 EIYE-----FAYENIPYIISDEIYNGLVYEGKCYSAIEFDENL-EKTILINGFSXLYAMT 227
Query: 307 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRER 366
GWR+GY+ + A K+Q A +ISQ ++ M+K F R
Sbjct: 228 GWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETERE--INSMIKEFDRR 285
Query: 367 RDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 426
R ++K + G +++ P GA+Y+F + E+ LL + VA
Sbjct: 286 RRLVLKYVKDF-GWEVNNPIGAYYVFPNIG-------------EDGREFAYKLLKEKFVA 331
Query: 427 LVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 461
L PG FG IRISYA S ++ +ERIK+ L
Sbjct: 332 LTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFL 368
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 35/389 (8%)
Query: 86 ATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICH 142
A L + G+ VIRL G+P DF P + EA AI+EG Y + G ELR AI
Sbjct: 30 ARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVE 89
Query: 143 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 202
+ K +NG+ TPD + V+ +++ A+ PGDE+++P P + Y + + P
Sbjct: 90 REKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKP 149
Query: 203 VILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 262
V T E++ D + K+T++++ + + +P+NPTG++Y K L+EI I ++ +
Sbjct: 150 VEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEY-EI 208
Query: 263 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV---NGFSKAFAMTGWRLGYIAGPKHF 319
V+SDEIY+ + Y H S PG + + V NG SK + TGWRLGY+ +F
Sbjct: 209 PVISDEIYDLMTYE-GEHIS----PGSLTKDVPVIVMNGLSKVYFATGWRLGYM----YF 259
Query: 320 VAACNKIQSQFTSGASSISQ-------KXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVK 372
V NK+ S+ +++ + + + +K +ERRD++ K
Sbjct: 260 VDPENKL-SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYK 318
Query: 373 SFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 432
E+ G+ ++PQGAFY+F G +N + +L A V V G
Sbjct: 319 RLNEIPGISTTKPQGAFYIFPKIEV---------GPWKNDKEFVLDVLHNAHVLFVHGSG 369
Query: 433 FGDDTC--IRISYAASLTTLQAAVERIKK 459
FG+ R + + L+ A++R +K
Sbjct: 370 FGEYGAGHFRAVFLPPIEILEEAMDRFEK 398
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 187/394 (47%), Gaps = 27/394 (6%)
Query: 85 QATALAQAGVSVIRLAAGEPDFDTPVLIAEA-GINAIREGFTRYTPNAGTLELRSAICHK 143
+ T LA A SV+ L G PD P + E A + +YT G L A+
Sbjct: 15 EFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCL 73
Query: 144 LKEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 202
+ P ++ILV+ GA S+ ++ + PGDEVII PF+ Y M R+A A P
Sbjct: 74 YGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVP 133
Query: 203 VILPTR---------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253
V +P R S ++ DP+ LESK + K++ +IL +P NP G VY + L IA
Sbjct: 134 VFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIA 193
Query: 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313
+ KH L + SDE+YE ++Y TH A+LPGMWERT+T+ K F++TGW+LG+
Sbjct: 194 DLCVKHDTLCI-SDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWS 252
Query: 314 AGPKHFVAACNKI-QSQFTSGASSISQKXXXXXXXXXXXXXE---VVSKMVKAFRERRDF 369
GP H + + Q+ F + A+ + + + + K +RD
Sbjct: 253 IGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDR 312
Query: 370 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE-SLCRYLLDKAQVALV 428
+V+ + G+K P G +++ D S+ G++ E + +++ ++ +
Sbjct: 313 MVRLLNSV-GLKPIVPDGGYFIIADVSS-LGADLSDMNSDEPYDYKFVKWMTKHKKLTAI 370
Query: 429 PGDAFGD-------DTCIRISYAASLTTLQAAVE 455
P AF D + +R + +TL AA E
Sbjct: 371 PVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEE 404
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 186/394 (47%), Gaps = 27/394 (6%)
Query: 85 QATALAQAGVSVIRLAAGEPDFDTPVLIAEA-GINAIREGFTRYTPNAGTLELRSAICHK 143
+ T LA A SV+ L G PD P + E A + +YT G L A+
Sbjct: 15 EFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCL 73
Query: 144 LKEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 202
+ P ++ILV+ GA S+ ++ + PGDEVII PF+ Y M R+A A P
Sbjct: 74 YGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVP 133
Query: 203 VILPTR---------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253
V +P R S ++ DP+ LESK + K++ +IL +P NP G VY + L IA
Sbjct: 134 VFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIA 193
Query: 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313
+ KH L + SDE+YE ++Y TH A+LPGMWERT+T+ F++TGW+LG+
Sbjct: 194 DLCVKHDTLCI-SDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWS 252
Query: 314 AGPKHFVAACNKI-QSQFTSGASSISQKXXXXXXXXXXXXXE---VVSKMVKAFRERRDF 369
GP H + + Q+ F + A+ + + + + K +RD
Sbjct: 253 IGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDR 312
Query: 370 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE-SLCRYLLDKAQVALV 428
+V+ + G+K P G +++ D S+ G++ E + +++ ++ +
Sbjct: 313 MVRLLNSV-GLKPIVPDGGYFIIADVSS-LGADLSDMNSDEPYDYKFVKWMTKHKKLTAI 370
Query: 429 PGDAFGD-------DTCIRISYAASLTTLQAAVE 455
P AF D + +R + +TL AA E
Sbjct: 371 PVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEE 404
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 192/399 (48%), Gaps = 41/399 (10%)
Query: 76 PSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLE 135
P I Q +ALAQ I L+ G PDFD P + E + + +G +Y P G
Sbjct: 13 PQLGTTIFTQMSALAQQH-QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQA 71
Query: 136 LRSAICHKLKEENGLSYTPD---QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY- 191
LR AI K + G Y PD I V+ GA +++ A+ A+ GDEVI P + SY
Sbjct: 72 LREAIAQKTERLYG--YQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129
Query: 192 PEMA-------RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244
P +A R+A P +F +D + + L+E++RL+IL +P NP+ +V+
Sbjct: 130 PAIALSGGIVKRMALQPP---------HFRVDWQEFAALLSERTRLVILNTPHNPSATVW 180
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
+ + + +A H + V+SDE+YEHI ++ H S + P + ER + V+ F K +
Sbjct: 181 QQADFAALWQAIAGH-EIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
MTGW++GY P A K+ T ++ +Q E + +R
Sbjct: 240 MTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQ---LALADMLRAEPEHYLALPDFYR 296
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
++RD LV + E +++ +G ++L +D+S +++ E C++L +
Sbjct: 297 QKRDILVNALNE-SRLEILPCEGTYFLLVDYS--------AVSTLDDVE-FCQWLTQEHG 346
Query: 425 VALVPGDAFGDD----TCIRISYAASLTTLQAAVERIKK 459
VA +P F D IR+ +A +TL AA ER+++
Sbjct: 347 VAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 179/396 (45%), Gaps = 28/396 (7%)
Query: 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGF--TRYTPNAGTLELRSAICHKLKEENGLSY 152
V+ L G PDF P EA +A+ F +YT G L + E G
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 153 TP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--- 208
P +LV+ G ++ A A+ GDEVII PF+ Y M +A PV + +
Sbjct: 89 DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGP 148
Query: 209 -------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261
S N+ LDP L K T +++ L+L +P+NP G V+ + L+ +A + +H
Sbjct: 149 IQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-D 207
Query: 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 321
++ ++DE+Y+ ++Y H S ASLPGMWERTLT+ K F+ TGW++G++ GP H +
Sbjct: 208 VVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMK 267
Query: 322 ACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVS----KMVKAFRERRDFLVKSFGEL 377
+ + SQ S + +A + RD +++S +
Sbjct: 268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327
Query: 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN--SESLCRYLLDKAQVALVPGDAFGD 435
G+K PQG+++L D S + + G ++ ++++ + +P F
Sbjct: 328 -GLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYS 386
Query: 436 -------DTCIRISYAASLTTLQAAVERIKKGLLTL 464
D IR + TLQA E+++K + L
Sbjct: 387 VPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVEL 422
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 178/396 (44%), Gaps = 28/396 (7%)
Query: 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGF--TRYTPNAGTLELRSAICHKLKEENGLSY 152
V+ L G PDF P EA +A+ F +YT G L + E G
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 153 TP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--- 208
P +LV+ G ++ A A+ GDEVII PF+ Y M +A PV + +
Sbjct: 89 DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGP 148
Query: 209 -------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261
S N+ LDP L K T +++ L+L +P+NP G V+ + L+ +A + +H
Sbjct: 149 IQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-D 207
Query: 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 321
++ ++DE+Y+ ++Y H S ASLPGMWERTLT+ F+ TGW++G++ GP H +
Sbjct: 208 VVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHIMK 267
Query: 322 ACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVS----KMVKAFRERRDFLVKSFGEL 377
+ + SQ S + +A + RD +++S +
Sbjct: 268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327
Query: 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN--SESLCRYLLDKAQVALVPGDAFGD 435
G+K PQG+++L D S + + G ++ ++++ + +P F
Sbjct: 328 -GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYS 386
Query: 436 -------DTCIRISYAASLTTLQAAVERIKKGLLTL 464
D IR + TLQA E+++K + L
Sbjct: 387 VPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVEL 422
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 178/396 (44%), Gaps = 28/396 (7%)
Query: 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGF--TRYTPNAGTLELRSAICHKLKEENGLSY 152
V+ L G PDF P EA +A+ F +YT G L + E G
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 153 TP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--- 208
P +LV+ G ++ A A+ GDEVII PF+ Y M +A PV + +
Sbjct: 89 DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGP 148
Query: 209 -------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261
S N+ LDP L K T +++ L+L +P+NP G V+ + L+ +A + +H
Sbjct: 149 IQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-D 207
Query: 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 321
++ ++DE+Y+ ++Y H S ASLPGMWERTLT+ F+ TGW++G++ GP H +
Sbjct: 208 VVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHIMK 267
Query: 322 ACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVS----KMVKAFRERRDFLVKSFGEL 377
+ + SQ S + +A + RD +++S +
Sbjct: 268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327
Query: 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN--SESLCRYLLDKAQVALVPGDAFGD 435
G+K PQG+++L D S + + G ++ ++++ + +P F
Sbjct: 328 -GLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYS 386
Query: 436 -------DTCIRISYAASLTTLQAAVERIKKGLLTL 464
D IR + TLQA E+++K + L
Sbjct: 387 VPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVEL 422
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 194/416 (46%), Gaps = 35/416 (8%)
Query: 71 VNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN 130
V+ ++P T + +ALA + + L G PD D P + +A +AI G +Y P
Sbjct: 4 VSRLRPYATTVFAEM-SALATR-IGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPG 61
Query: 131 AGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV 189
G+ LR AI + + G+ Y P+ ++LV+ GA ++I AVL + PG EV++ PF+
Sbjct: 62 PGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYD 121
Query: 190 SYPEMARIADATPVILP-TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 248
SY + +A A V +P F LD L +T ++R LI+ SP NPTG+V
Sbjct: 122 SYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATE 181
Query: 249 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308
L IA I L+V++DE+YEH+++ A H A GM ERT+T++ + F TGW
Sbjct: 182 LAAIAEIAVAA-NLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGW 240
Query: 309 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRD 368
++G+ GP +A + + + Q V+ + + R RRD
Sbjct: 241 KIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAW---VAALRNSLRARRD 297
Query: 369 FLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 428
L E+ G + + G ++L D G+ ++S C L +K VA +
Sbjct: 298 RLAAGLTEI-GFAVHDSYGTYFLCAD------PRPLGY---DDSTEFCAALPEKVGVAAI 347
Query: 429 PGDAFGD-------------DTCIRISYAASLTTLQAAVERIKKGLLTLRP--GVP 469
P AF D + +R ++ TL A+ R+ +L RP GVP
Sbjct: 348 PMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLS--VLAERPATGVP 401
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 188/405 (46%), Gaps = 49/405 (12%)
Query: 65 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF 124
+ L PR A K S I + + LAQ + + L G P P + EA +R
Sbjct: 1 MRLHPRTEAAKES----IFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEA----VRRAL 51
Query: 125 TR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 181
R Y P AG LR A+ + E P+ ++V++GA +++ + ++ PGDEV
Sbjct: 52 GRQDQYAPPAGLPALREALAEEFAVE------PESVVVTSGATEALYVLLQSLVGPGDEV 105
Query: 182 IIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPT 240
++ PF+ Y A +A A ++ ++ E F LD LE LT ++R L+L +P NPT
Sbjct: 106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPT 165
Query: 241 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA--PATHTSFASLPGMWERTLTVNG 298
G V+ + L+ IAR+ H L ++SDE+Y+ + Y P FA ERT TV
Sbjct: 166 GLVFGERELEAIARLARAH-DLFLISDEVYDELYYGERPRRLREFAP-----ERTFTVGS 219
Query: 299 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSK 358
K TG+R+G+I GPK F+ ++ Q+TS ++ +
Sbjct: 220 AGKRLEATGYRVGWIVGPKEFMPRLAGMR-QWTSFSAPTPLQAGVAEALKLARREGFYEA 278
Query: 359 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 418
+ + +R RRD L + G+++ P+G ++L + + + F
Sbjct: 279 LREGYRRRRDLLAGGLRAM-GLRVYVPEGTYFLMAELPGW-----DAF-----------R 321
Query: 419 LLDKAQVALVPGDAF----GDDTCIRISYAASLTTLQAAVERIKK 459
L+++A+VAL+P AF R ++ + L A+ER+ +
Sbjct: 322 LVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGR 366
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 30/262 (11%)
Query: 156 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP--------T 207
++LV+ GA +++ + GDEVII PF+ Y M + A P +P T
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 208 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267
S +++LD LE+ EK++++I+ +P NP G V + L+ +A + K +L +SD
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSD 221
Query: 268 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP----------- 316
E+YEH+++ P H +LPGMWERT+T+ K F++TGW++G+ GP
Sbjct: 222 EVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVH 281
Query: 317 KHFVAAC-NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFG 375
++ V C IQ G + ++ E+++K RD++
Sbjct: 282 QNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAK--------RDYMASFLA 333
Query: 376 ELEGVKMSEPQGAFYLFIDFST 397
E+ G+ + PQG +++ D+S+
Sbjct: 334 EV-GMNPTVPQGGYFMVADWSS 354
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%), Gaps = 30/262 (11%)
Query: 156 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP--------T 207
++LV+ GA +++ + GDEVII PF+ Y M + A P +P T
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 208 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267
S +++LD LE+ EK++++I+ +P NP G V + L+ +A + K +L +SD
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSD 221
Query: 268 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP----------- 316
E+YEH+++ P H +LPGMWERT+T+ F++TGW++G+ GP
Sbjct: 222 EVYEHMVFEPFEHIRICTLPGMWERTITIGSAGXTFSLTGWKIGWAYGPEALLKNLQMVH 281
Query: 317 KHFVAAC-NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFG 375
++ V C IQ G + ++ E+++K RD++
Sbjct: 282 QNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAK--------RDYMASFLA 333
Query: 376 ELEGVKMSEPQGAFYLFIDFST 397
E+ G+ + PQG +++ D+S+
Sbjct: 334 EV-GMNPTVPQGGYFMVADWSS 354
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 176/396 (44%), Gaps = 23/396 (5%)
Query: 70 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGIN-AIREGFTRYT 128
R++ + P + A + G +I L+ G PD TP I E A RE Y+
Sbjct: 13 RIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYS 72
Query: 129 PNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 187
+ G LR AI H ++ + P+ + +V+ G+K+ + +LA GD +++P P
Sbjct: 73 TSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPS 132
Query: 188 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVY 244
+ + A IA A +P +F + LE + E K R++IL PSNPT
Sbjct: 133 YPIHIYGAVIAGAQVRSVPLVPGIDFFNE---LERAIRESIPKPRMMILGFPSNPTAQCV 189
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
+ + + + AK ++V+ D Y I+Y S +PG + + SK++
Sbjct: 190 ELDFFERVVAL-AKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN 248
Query: 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
M GWR+G++ G V+A +I+S G + Q + V + + ++
Sbjct: 249 MAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQ---VAAIAALEGDQQCVRDIARQYQ 305
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
+RRD LVK E G + P+ + Y++ Y G +E + LL A+
Sbjct: 306 QRRDVLVKGLRE-AGWMVENPKASMYVWAKIPEPYAH----LGSLE----FAKKLLQDAK 356
Query: 425 VALVPGDAFGD--DTCIRISYAASLTTLQAAVERIK 458
V++ PG FGD D +R + + L+ AV IK
Sbjct: 357 VSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIK 392
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 13/327 (3%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR 126
S RV + S + A + GV + L G+PD TP + E I +
Sbjct: 16 FSDRVLLTEESPIRKLVPFAEXAKKRGVRIHHLNIGQPDLKTPEVFFER-IYENKPEVVY 74
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186
Y+ +AG ELR A K + P+ +LV+NG ++IL + + +PGDE+++ P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 187 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246
F+ +Y A+IA + + R E F + P+ LES + E+++ ++L +P NPTG VY K
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAM 305
+ + I +H L++ DE+Y I++ FAS L ++ + ++ S F+
Sbjct: 194 DEXRYLVEIAERHGLFLIV-DEVYSEIVF----RGEFASALSIESDKVVVIDSVSXKFSA 248
Query: 306 TGWRLG-YIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 364
G R+G I + ++ K+ +Q + Q + V + +R
Sbjct: 249 CGARVGCLITRNEELISHAXKL-AQGRLAPPLLEQIGSVGLLNLDDSFFDFVR---ETYR 304
Query: 365 ERRDFLVKSFGELEGVKMSEPQGAFYL 391
ER + ++K E + ++P GAFY+
Sbjct: 305 ERVETVLKKLEEHGLKRFTKPSGAFYI 331
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 42/420 (10%)
Query: 64 DVSLSPRVNAV-KPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE 122
DVS+S V P +TV +D A + + +I+L+ G+P D +L + A I ++E
Sbjct: 5 DVSMSNHAGLVFNPIRTV--SDNAKP-SPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKE 61
Query: 123 GFTR-----YTPNAGTLELRSAICHKL------KEENGLSYTPDQILVSNGAKQSILQAV 171
Y P G+ E R A+ KEE + D +++ +G IL A+
Sbjct: 62 AIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAI 121
Query: 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 231
A+C GD ++P P + Y + + R ++ D + +K++LL
Sbjct: 122 TAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLL 181
Query: 232 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA----PATHTSFASLP 287
I+ +PSNP GS + + +++I R+ A+ RL + SDEIY +++ AT TS A
Sbjct: 182 IVTNPSNPCGSNFSRKHVEDIVRL-AEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE 240
Query: 288 GMWERTLTVNGFSKAFAMTGWRLGYI-------AGPKHFVAACNKIQSQFTSGASSISQK 340
R + + G + + GWRLG++ GP F+ ++ G ++ Q
Sbjct: 241 TTVPRVI-LGGTAXNLVVPGWRLGWLLYVDPHGNGPS-FLEGLKRV-GMLVCGPCTVVQ- 296
Query: 341 XXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTY 398
E + ++V E +L GE G+ + P+GA YL ID Y
Sbjct: 297 -AALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKY 355
Query: 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIK 458
I+ LL++ V ++PG F R++ + + AVERIK
Sbjct: 356 R--------DIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIK 407
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 156/349 (44%), Gaps = 42/349 (12%)
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPA 185
YT G +E R+AI L +G + D + + GA S+ A+ S DE I A
Sbjct: 72 YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 186 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245
P++ Y A A V +P +E+F +D LE ++ +R +I+ SP+NP+G+VY
Sbjct: 132 PYFPEYKVFVNAAGARLVEVPAD-TEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYS 190
Query: 246 KNLLDEIARIVAKHPR-----LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 300
+ + +++ ++ K + + +++DE Y I+Y F + ++ TL +S
Sbjct: 191 EETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVY-DGIKVPFVT--KYYDNTLVCYSYS 247
Query: 301 KAFAMTGWRLGYIAGPKH-------FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXX 353
K+ ++ G R+GY+ P + A C ++ A S+ QK
Sbjct: 248 KSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQK--------XIVKC 299
Query: 354 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413
+ + + A++E RD L + + G +P GAFY F+ ++S
Sbjct: 300 QGATGDINAYKENRDLLYEGLTRI-GYHCFKPDGAFYXFVK------------ALEDDSN 346
Query: 414 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQA---AVERIKK 459
+ C ++ V +V D FG +RISY ++ A E+I K
Sbjct: 347 AFCEKAKEE-DVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYK 394
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 157/360 (43%), Gaps = 35/360 (9%)
Query: 126 RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 185
+Y+P G L +++ + + V+ GA + IL ++ + + GDEVI+
Sbjct: 90 QYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFE 149
Query: 186 PFWVSYPEMARIADATPVILP-----------TRISENFLLDPKVLESKLTEKSRLLILC 234
PF+ Y + V +P TR E + +D + E +T K++ +I+
Sbjct: 150 PFFDQYIPNIELCGGKVVYVPINPPKELDQRNTR-GEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 235 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERT 293
+P NP G V+ + L + I KH ++++SDE+YEH+ Y + T A+L P + + T
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKH-NVVIISDEVYEHL-YFTDSFTRIATLSPEIGQLT 266
Query: 294 LTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXX 352
LTV +FA TGWR+G++ ++ K ++ + S Q+
Sbjct: 267 LTVGSAGXSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKI 326
Query: 353 XEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY-------YGSEAEG 405
KM + + + F EL G+ + P+G +++ +DFS Y E
Sbjct: 327 G-YFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILN 384
Query: 406 FGKIENSESLCRYLLDKAQVALVPGDAF-------GDDTCIRISYAASLTTLQAAVERIK 458
GK + +L+++ V +P F + +R + L+ AVER+K
Sbjct: 385 KGK---DFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLK 441
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 160/390 (41%), Gaps = 22/390 (5%)
Query: 81 AITDQATALAQAGVSVIRLAAGEP----DFDTPVLIAEAGINAIREG-FTRYTPNAGTLE 135
AI D ++I L+ G+P + T + +A +A+ G + Y P+ G L
Sbjct: 41 AIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLS 100
Query: 136 LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA 195
R I D IL S G Q+I + + +PG +++P P + Y +A
Sbjct: 101 SREEIASYYHCPEAPLEAKDVILTS-GCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLA 159
Query: 196 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 255
+ +++ +D K LE + EK+ LI+ +PSNP GSV+ K L +I +
Sbjct: 160 ESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAV 219
Query: 256 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 315
A+ + +L+DEIY ++++ + A+L L+ G +K + + GWRLG+I
Sbjct: 220 AARQ-CVPILADEIYGDMVFSDCKYEPLATL-STDVPILSCGGLAKRWLVPGWRLGWILI 277
Query: 316 PKHFVAACNKIQ------SQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDF 369
N+I+ SQ G +I Q E + + D
Sbjct: 278 HDRRDIFGNEIRDGLVKLSQRILGPCTIVQG--ALKSILCRTPGEFYHNTLSFLKSNADL 335
Query: 370 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 429
+ + G++ P GA YL + G E E F + EN L+ + V +P
Sbjct: 336 CYGALAAIPGLRPVRPSGAMYLMV------GIEMEHFPEFENDVEFTERLVAEQSVHCLP 389
Query: 430 GDAFGDDTCIRISYAASLTTLQAAVERIKK 459
F IR+ + A RI++
Sbjct: 390 ATCFEYPNFIRVVITVPEVMMLEACSRIQE 419
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 161/392 (41%), Gaps = 26/392 (6%)
Query: 81 AITDQATALAQAGVSVIRLAAGEP----DFDTPVLIAEAGINAIREG-FTRYTPNAGTLE 135
AI D +VI L+ G+P + T + +A +A+ G + Y P+ G L
Sbjct: 18 AIVDNMKVKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLS 77
Query: 136 LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA 195
R + D IL S G Q+I + + +PG ++IP P + Y +A
Sbjct: 78 SREEVASYYHCPEAPLEAKDVILTS-GCSQAIELCLAVLANPGQNILIPRPGFSLYRTLA 136
Query: 196 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 255
+ +++ +D K LES + EK+ L++ +PSNP GSV+ K L +I
Sbjct: 137 ESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILA- 195
Query: 256 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 315
VA+ + +L+DEIY ++++ + A+L L+ G + + + GWRLG+I
Sbjct: 196 VAERQCVPILADEIYGDMVFSDCKYEPMATL-STNVPILSCGGLAXRWLVPGWRLGWILI 254
Query: 316 PKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAF--------RERR 367
N+I+ G +SQ+ ++ + + F +
Sbjct: 255 HDRRDIFGNEIR----DGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNA 310
Query: 368 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 427
D + + G++ P GA YL + G E E F + EN L+ + V
Sbjct: 311 DLCYGALSAIPGLQPVRPSGAMYLMV------GIEMEHFPEFENDVEFTERLIAEQSVHC 364
Query: 428 VPGDAFGDDTCIRISYAASLTTLQAAVERIKK 459
+P F R+ + A RI++
Sbjct: 365 LPATCFEYPNFFRVVITVPEVMMLEACSRIQE 396
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 149/366 (40%), Gaps = 25/366 (6%)
Query: 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD 155
+I G+P P EA ++ YT G LR I E G+ P
Sbjct: 33 IIHXEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPG 92
Query: 156 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 215
+++++ G+ L A A+ GD V I AP + SY ++ R PV LPT EN L
Sbjct: 93 RVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPT-APENRLQ 151
Query: 216 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 275
+ L L + SP+NPTG+ + A+ +SDEIY I Y
Sbjct: 152 PVPADFAGLDLAG--LXVASPANPTGTXLDHAAXGALIE-AAQAQGASFISDEIYHGIEY 208
Query: 276 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 335
T+ + + +N FSK F+ TGWR+G+ P+ V +I A
Sbjct: 209 EAKAVTALE----LTDECYVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIAQNXFICAP 264
Query: 336 SISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 395
SQ + + ++ R ++ + +++ P GAFY++ D
Sbjct: 265 HASQVAALAALDCDAE----LQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADV 320
Query: 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT---CIRISYAASLTTLQA 452
S ++S + +L+KA VA+ PG F + +R SYA + ++
Sbjct: 321 SDL----------TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEE 370
Query: 453 AVERIK 458
++R++
Sbjct: 371 GLDRLE 376
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 170/391 (43%), Gaps = 40/391 (10%)
Query: 91 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGL 150
+ G V+ L+ + +F P + E + E YT T E + + +K+ +
Sbjct: 28 EVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYT--GPTEEYKKTVKKWMKDRHQW 85
Query: 151 SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS 210
D I+ + G ++ AV PGD VII P V YP I + I+ +
Sbjct: 86 DIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITP--VYYPFFMAIKNQERKIIECELL 143
Query: 211 EN---FLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 266
E + +D + LE +K+ + L+ CSP NP G V+ K+ L +I IV K L++ S
Sbjct: 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSD-LMLWS 202
Query: 267 DEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 325
DEI+ +I HT F S+ + ++T+T SK F + G G + +
Sbjct: 203 DEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG------MGMSNIIIKNPD 256
Query: 326 IQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR-------ERRDFLVKSFGELE 378
I+ +FT + S E+ K + ++ +VK F E+
Sbjct: 257 IRERFTKSRDATS---GMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVN 313
Query: 379 GVKMSEP--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 436
++ P +G + +IDF K+++ +++ +++ KAQ+ G FGD
Sbjct: 314 HPEIKAPLIEGTYLQWIDFRAL---------KMDH-KAMEEFMIHKAQIFFDEGYIFGDG 363
Query: 437 TC--IRISYAASLTTLQAAVERIKKGLLTLR 465
RI+ AA + +Q ++ER+ K L L+
Sbjct: 364 GIGFERINLAAPSSVIQESLERLNKALKDLK 394
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 157/371 (42%), Gaps = 32/371 (8%)
Query: 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFT-----RYTPNAGTLELRSAICHKLKEENGL 150
+I A G PD TP I I+ ++ T +Y G + AI + + +
Sbjct: 49 LINXAVGIPDGPTPQGI----IDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNV 104
Query: 151 SYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI 209
+ D++ + G K ++ V +PGD V++P P + Y +AD PV L
Sbjct: 105 TLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLE- 163
Query: 210 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE-IARIVAKHPRLLVLSDE 268
++L D ++S++ +K++L+ L P+NPTGS K + DE IA+ + ++ D
Sbjct: 164 PPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTK--IVHDF 221
Query: 269 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 328
Y + + AS G + + + SK + +G+R+G+ G K + A K Q+
Sbjct: 222 AYGAFGFDAKNPSILASENGK-DVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQT 280
Query: 329 QFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 388
+G Q E S + F+ RRD + + + +G
Sbjct: 281 HTNAGXFGALQDAAIYALNHYDDFLEEQSNV---FKTRRDRFEAXLAKAD-LPFVHAKGG 336
Query: 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAAS 446
Y++++ Y +SE ++L+ + + + PG FG+ + +RIS A
Sbjct: 337 IYVWLETPPGY-----------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALD 385
Query: 447 LTTLQAAVERI 457
L A R+
Sbjct: 386 DQKLDEAAIRL 396
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 166/374 (44%), Gaps = 31/374 (8%)
Query: 99 LAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 158
+ + DF I ++ N + + YT + +I + L + + ++
Sbjct: 37 MWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSY--NESIVNWLYRRHNWKIKSEWLI 94
Query: 159 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN--FLLD 216
S G +I + + D+++I P + + + + + +I P + EN +++D
Sbjct: 95 YSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMD 154
Query: 217 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 276
+ +E+K+ + +L ILC+P NP G V+ K+ L ++ I KH + ++SDEI+ II
Sbjct: 155 YEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKH-NVKIISDEIHSDIILK 212
Query: 277 PATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGP-----KHFVAACNKIQSQF 330
H AS+ +E+ T+T +K F + G + Y+ P K A +I +
Sbjct: 213 KHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKR 272
Query: 331 TSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAF 389
+ S ++ + + ++ DF +K E + +K+ +P+G +
Sbjct: 273 NNCFSLVATEASYNNGESW------LESFLEYLESNIDFAIKYINENMPKLKVRKPEGTY 326
Query: 390 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISYAASL 447
L++DFS A G E L L+ K +VAL G++F G RI+ A
Sbjct: 327 LLWVDFS------ALGLS----DEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPR 376
Query: 448 TTLQAAVERIKKGL 461
+ L+ A+ RIK +
Sbjct: 377 SMLEEALIRIKNAI 390
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 167/386 (43%), Gaps = 55/386 (14%)
Query: 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP 154
++++ + DF I EA IN RE Y N +L A+ ++E+ +
Sbjct: 62 ELLQMWVADMDFLPVPEIKEAIINYGREHIFGY--NYFNDDLYQAVIDWERKEHDYAVVK 119
Query: 155 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENF 213
+ IL +G +I A+ A GD V+I +P + + R+ D V +I + F
Sbjct: 120 EDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRF 179
Query: 214 LLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
+D + LE + + + ++ +LCSP NP G V+ + L +IA + KH +LV SDEI++
Sbjct: 180 EIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILV-SDEIHQD 238
Query: 273 IIYAPATHTSFASLPGMWE----------RTLTVNGFSKAFAMT-------GWRLGYIAG 315
+ TH S +L ++ +T + G +FA+ ++ +A
Sbjct: 239 LALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN 298
Query: 316 PKHFVAACNKIQSQ--FTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKS 373
+H V I +Q F G + + V+ +K ++K
Sbjct: 299 NQHEVPTVGMIATQAAFQYGKPWLEE------------LKTVIEGNIK-------LVIKE 339
Query: 374 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433
+K+ EP+G + +++DFS Y ++ + L L ++A+V L G F
Sbjct: 340 LEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQ----------LSEKLQNEAKVVLNDGAHF 389
Query: 434 GDD--TCIRISYAASLTTLQAAVERI 457
G + R++ A T+Q A+ RI
Sbjct: 390 GKEGKYFARLNVATPKNTVQEALSRI 415
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 151/332 (45%), Gaps = 24/332 (7%)
Query: 135 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM 194
EL A+ K E+ S+ + I+ G +I A+ A G+ V+I +P YP
Sbjct: 70 ELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPV---YPPF 126
Query: 195 ARIA--DATPVILPTRISEN--FLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLL 249
AR + ++ + EN F +D + LE+ + E +L +LC+P NP G V+ + +L
Sbjct: 127 ARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVL 186
Query: 250 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGW 308
++I + KH +LV SDEI++ + H SF ++ P + L ++ +K F + G
Sbjct: 187 EQIGHLCQKHHVILV-SDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGT 245
Query: 309 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRD 368
+ Y + A K Q Q + +S + + E
Sbjct: 246 KNSYAIIENPTLCAQFKHQ-QLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQ 304
Query: 369 FLVKSFG-ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 427
F V+ F E +K+ +PQG + +++DFS Y ++ ++L L D+A+V L
Sbjct: 305 FAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTD----------DALFTLLHDQAKVIL 354
Query: 428 VPGDAFGDDTCI--RISYAASLTTLQAAVERI 457
G +G + + R++ AA + ++ +RI
Sbjct: 355 NRGSDYGSEGELHARLNIAAPKSLVEEICKRI 386
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 164/376 (43%), Gaps = 35/376 (9%)
Query: 96 VIRLAAGEPDFDTPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSY 152
+I + DF+ P I A I G+T N G + IC+ K++
Sbjct: 26 LIHAWIADXDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDI-----ICNWTKKQYNWDI 80
Query: 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP-TRISE 211
+ I+ S G ++ ++ A + V++ P + + E + + P + ++
Sbjct: 81 QKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQND 140
Query: 212 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 271
+ +D + LE + + +L +LCSP NP G V+ K L ++ + K+ ++V++DEI+
Sbjct: 141 TYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSLCTKY-NVIVVADEIHS 199
Query: 272 HIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330
IIYA THT FASL + RT+T S F + G + I P K++ F
Sbjct: 200 DIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIIIIPN------EKLRQAF 253
Query: 331 TS-----GASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSE 384
TS G ++ + ++++ + F + + + + + +
Sbjct: 254 TSIQYRQGFHGLNIFAYTAXQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVXK 313
Query: 385 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRIS 442
P+G+F L+ID S S+ E + L +K ++ + PG+ + G + I I+
Sbjct: 314 PEGSFLLWIDCSALNLSQDER----------TKLLEEKGKIIVEPGEKYGLGGEEHIGIN 363
Query: 443 YAASLTTLQAAVERIK 458
+ L+ + R++
Sbjct: 364 IGCPRSVLEEILNRLR 379
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 35/396 (8%)
Query: 75 KPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR-----YTP 129
+PS + + + + GV +I L+ G D P EA + A+ E Y
Sbjct: 6 EPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPP----EAPLKALAEALNDPTTYGYCL 61
Query: 130 NAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 188
+ TL + G+ P + L G+++ + +LA+ P D +++P +
Sbjct: 62 KSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAY 121
Query: 189 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 248
SY AR+A ++P R E+ L D K + + ++++L+L P+NPTG+V
Sbjct: 122 PSYFGAARVASLRTFLIPLR--EDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGY 179
Query: 249 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308
+E + KH L ++ D Y +Y + A LPG ER + + SK++ + G+
Sbjct: 180 FEEALGLARKH-GLWLIHDNPYVDQVYEGEAPSPLA-LPGAKERVVELFSLSKSYNLAGF 237
Query: 309 RLGYIAGPKHFVAACNKIQS--QFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRER 366
RLG+ G + +A +++ F A + EVV + +RER
Sbjct: 238 RLGFALGSEEALARLERVKGVIDFNQYAGVLRMG-----VEALKTPKEVVRGYARVYRER 292
Query: 367 RDFLVKSFGELEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 425
+ ++ L+GV + P+ YL +G EG +++ E R + +
Sbjct: 293 ALGMAEA---LKGVLSLLPPRATMYL-------WGRLPEG---VDDLEFGLRLVERGVAL 339
Query: 426 ALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461
A G G +RI+ L L A +RI++ L
Sbjct: 340 APGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 166/398 (41%), Gaps = 41/398 (10%)
Query: 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAI-REGFT 125
L+ R N +K S + +A+ L + GV +I LAAG+PD P LI A + I +E
Sbjct: 7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPD---PELIPRAVLGEIAKEVLE 63
Query: 126 R------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD 179
+ YTP G ELR + LK+ + L +P+ I+++ G ++ + PGD
Sbjct: 64 KEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGD 123
Query: 180 EVIIPAPFWV----SYPEMARIADATPVILP-TRISENFLLDPKVLESKLTEKSRLLILC 234
VI P ++ ++ ++ + PV R+ LL+ K+ E K + LI
Sbjct: 124 VVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVD---LLEEKIKELKAKGQKVKLIYT 180
Query: 235 SPS--NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 292
P+ NP G + I +K+ LL++ D Y + Y +L R
Sbjct: 181 IPTGQNPMGVTMSMERRKALLEIASKY-DLLIIEDTAYNFMRYEGGDIVPLKALDNEG-R 238
Query: 293 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXX 352
+ SK TG+R+G+I + + A +ISQ
Sbjct: 239 VIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFE 297
Query: 353 XEVVSKMVKAFRERRDFLVKSF-GELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIE 410
+ + ++E+RD ++K+ L + ++P G F +F + A+G
Sbjct: 298 KYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMF-----FLPEGADGI---- 348
Query: 411 NSESLCRYLLDKAQVALVPGDAFGDD----TCIRISYA 444
S L+++ V +VPG F D IR++++
Sbjct: 349 ---SFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS 383
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 145/343 (42%), Gaps = 37/343 (10%)
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYT-PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 185
Y P+ G LR KL E+ + +I +S+GAK + + +L+ P V I
Sbjct: 71 YGPDFGLPALR----QKLSEDFYRGFVDAKEIFISDGAKVDLFR-LLSFFGPNQTVAIQD 125
Query: 186 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245
P + +Y ++AR+ A +I + EN P+ E + +L LCSP+NPTG+V
Sbjct: 126 PSYPAYLDIARLTGAKEIIALPCLQENAFF-PEFPEDTHID---ILCLCSPNNPTGTVLN 181
Query: 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305
K+ L I +H +L+L D Y I P+ S +P + +N FSK
Sbjct: 182 KDQLRAIVHYAIEH-EILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF 240
Query: 306 TGWRLGYIAGPK-------HFVAA-CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVS 357
G RLG+ P+ HFV + S +GAS +Q+
Sbjct: 241 AGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQL----- 295
Query: 358 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCR 417
+ + +RE D L K+ G ++ + A YL++ + S+ + F
Sbjct: 296 EAIHYYRENSDLLRKALLA-TGFEVFGGEHAPYLWVKPTQANISDRDLFD---------- 344
Query: 418 YLLDKAQVALVPGDAFGDDTC--IRISYAASLTTLQAAVERIK 458
+ L + +A+ PG FG +R S + AA ER++
Sbjct: 345 FFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 22/343 (6%)
Query: 123 GFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEV 181
G YT G L +R + +L G D ++++ G + ++ AV A + GD+V
Sbjct: 70 GVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKV 129
Query: 182 IIPAPFWVSYPEMARI--ADATPVILPTRISENFL--LDPKVLESKLTEKSRLLILCSPS 237
I P + + ++ + PV L ++ LD LE +R+ + +P+
Sbjct: 130 AIVQPDYFANRKLVEFFEGEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPN 189
Query: 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTV 296
NP G VY + +IA + A++ V++D++Y + YA A++T + + E +T+
Sbjct: 190 NPAGVVYSAEEIGQIAALAARYG-ATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTI 248
Query: 297 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVV 356
G S +++G+RLG G + +A K+Q+ + A+ SQ E
Sbjct: 249 XGPSXTESLSGYRLGVAFGSRAIIARXEKLQAIVSLRAAGYSQAVLRGWFDEAPGWXE-- 306
Query: 357 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLC 416
+ + RD L+ EGV PQ YLF + AE
Sbjct: 307 -DRIARHQAIRDELLHVLRGXEGVFARTPQAGSYLFPRLPKLAVAPAE----------FV 355
Query: 417 RYLLDKAQVALVPGDAFGDDTC--IRISYAASLTTLQAAVERI 457
+ L +A V + PG F T +R++++ AA RI
Sbjct: 356 KILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRI 398
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 166/389 (42%), Gaps = 44/389 (11%)
Query: 90 AQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE-N 148
A G + L GEP TP +I +A ++ E +Y AG ELR A + LK +
Sbjct: 26 APEGXEAVPLHIGEPKHPTPKVITDALTASLHE-LEKYPLTAGLPELRQACANWLKRRYD 84
Query: 149 GLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPA-----PFWVSYPEMARIADATP 202
GL+ D +IL G+++++ V V +P + I PA PF+ Y E A +
Sbjct: 85 GLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIY-EGATLLGGGE 143
Query: 203 VILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 262
+ + +F D + + ++ ++++L+ +CSP+NP+GSV + E+ + K+
Sbjct: 144 IHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY-GF 202
Query: 263 LVLSDEIYEHIIYAP----ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318
++ SDE Y I + + A L ++ L S + G R G++AG
Sbjct: 203 IIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGDAE 262
Query: 319 FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELE 378
+ ++ S S Q+ + V + ++E+ + ++ ++
Sbjct: 263 LLKNFLLYRTYHGSAXSIPVQR----ASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVF 318
Query: 379 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL--CRYLLDKAQVALVPGDAFGDD 436
VK+ P +FY+++ K+ + + L R L KA + ++PG D
Sbjct: 319 DVKL--PDASFYIWL--------------KVPDGDDLAFARNLWQKAAIQVLPGRFLARD 362
Query: 437 T--------CIRISYAASLTTLQAAVERI 457
T +RI+ A + T A E I
Sbjct: 363 TEQGNPGEGYVRIALVADVATCVKAAEDI 391
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 130/311 (41%), Gaps = 26/311 (8%)
Query: 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 213
P+QIL +NGA + L + ++ PGD VI P + ++ + A + +
Sbjct: 81 PEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGW 140
Query: 214 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 273
L D + L + ++ + + + +NPTG+V + L+E+ I A +LSDE+Y
Sbjct: 141 LPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEI-ASEVGAYILSDEVYRSF 199
Query: 274 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333
+ S+ ++++ + VN S +++ G R+G++A H V + +T
Sbjct: 200 -----SELDVPSIIEVYDKGIAVNSLSXTYSLPGIRIGWVAA-NHQVTDILRDYRDYTXI 253
Query: 334 ASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI 393
+ + ++ + R L ++ L+ EP ++
Sbjct: 254 CAGVFDDLVAQL---------ALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPA 304
Query: 394 DFSTYYGSEAEGFGKIENS---ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTL 450
ST F KI E C LL + V LVPG+ F D +R+ +A TL
Sbjct: 305 VVST-------SFVKIAVDXPXEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQETL 357
Query: 451 QAAVERIKKGL 461
+E++ + L
Sbjct: 358 IKGLEKLSQFL 368
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 143/354 (40%), Gaps = 34/354 (9%)
Query: 121 REGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDE 180
REG++ Y G LR A+ G + D+I +S+G+K I + + S
Sbjct: 101 REGYSGYGAEQGQGALREAVASTFYGHAGRA--ADEIFISDGSKCDIARIQMMFGSK-PT 157
Query: 181 VIIPAPFWVSYPEMARIADATPVILPTRIS--ENFLLDPK---VLESKLTEKSRLLILCS 235
V + P + Y + + + T T E + +P + +++ ++ CS
Sbjct: 158 VAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCS 217
Query: 236 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 295
P+NPTG+ + L E+ K+ +LV D Y I P + +PG E +
Sbjct: 218 PNNPTGAAATRAQLTELVNFARKNGSILVY-DAAYALYISNPDCPKTIYEIPGADEVAIE 276
Query: 296 VNGFSKAFAMTGWRLGYIAGPKHFV--------AACNKIQSQFTSGASSISQKXXXXXXX 347
FSK TG RLG+ PK A N++ + +GAS+I Q
Sbjct: 277 TCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQ--AGGLAC 334
Query: 348 XXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 407
+ ++ M+K ++E L +F E+ G + A Y+++ F G
Sbjct: 335 LQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFP----------G 383
Query: 408 KIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERIKK 459
K S + +L++ + PG +G + +R S S + AV R K+
Sbjct: 384 K--PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKE 435
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 97 IRLAAGE-PDFDTPVLIAE--AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 153
IRL E P + L+A+ A ++ I RY P +ELR + + ++ G++ T
Sbjct: 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRY-PERDAVELRDELAAYITKQTGVAVT 91
Query: 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 213
D + +NG+ + + Q + A PG + P + +P +A+ T I +R +F
Sbjct: 92 RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIAVSR-GADF 149
Query: 214 LLDPKV-LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
+D V LE ++ ++ + +P+NPTG V LD++ RI+ P ++++ DE Y
Sbjct: 150 RIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS---LDDVERIINVAPGIVIV-DEAYAE 205
Query: 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 323
+P+ T P + + SKAF G RLGY F+ A
Sbjct: 206 FSPSPSATTLLEKYP---TKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAV 253
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 97 IRLAAGE-PDFDTPVLIAE--AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 153
IRL E P + L+A+ A ++ I RY P +ELR + + ++ G++ T
Sbjct: 30 IRLNTNENPYPPSEALVADLVATVDKIATELNRY-PERDAVELRDELAAYITKQTGVAVT 88
Query: 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 213
D + +NG+ + + Q + A PG + P + +P +A+ T I +R +F
Sbjct: 89 RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIAVSR-GADF 146
Query: 214 LLDPKV-LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
+D V LE ++ ++ + +P+NPTG V LD++ RI+ P ++++ DE Y
Sbjct: 147 RIDMDVALEEIRAKQPDIVFVTTPNNPTGDV---TSLDDVERIINVAPGIVIV-DEAYAE 202
Query: 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 323
+P+ T P + + SKAF G RLGY F+ A
Sbjct: 203 FSPSPSATTLLEKYP---TKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAV 250
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 145/367 (39%), Gaps = 28/367 (7%)
Query: 112 IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSNGAKQSILQ 169
I GI + + + G E R AI +++ G + + P++++++ GA +
Sbjct: 65 ICSEGIKSFK-AIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANET 123
Query: 170 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI-LPTRISENFLLDPKVLE------S 222
+ + PGD ++P+P++ ++ R +I + S NF + K ++
Sbjct: 124 IIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQ 183
Query: 223 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 282
K K + LIL +PSNP G+ K+ L + +H LV DEIY ++ S
Sbjct: 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLV-CDEIYAATVFDTPQFVS 242
Query: 283 FASLPGMWERTLT-------VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 335
A + E T V SK + G+R+G I V C + S F S
Sbjct: 243 IAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF-GLVS 301
Query: 336 SISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 395
+ +Q + + +R E+ G+K + + ++D
Sbjct: 302 TQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGL-EVVGIKCLKNNAGLFCWMDL 360
Query: 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISYA-ASLTTLQA 452
++ SL R +++ ++ + PG +F + R+ +A T+
Sbjct: 361 RPLLREST-----FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDI 415
Query: 453 AVERIKK 459
A+ RI++
Sbjct: 416 ALARIRR 422
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 159/387 (41%), Gaps = 53/387 (13%)
Query: 93 GVSVIRLAAGEPDFDTPVLIAEAGINAI-REGFTRYTPNAGTLELRSAICHKLKEENGLS 151
G V+ L E DF T + +A +A+ RE F Y P+ G+L L A + G
Sbjct: 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQREAFG-YQPD-GSL-LSQATAEFYADRYGYQ 78
Query: 152 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE 211
P+ I + + A+ +VI+P P +YP + AT E
Sbjct: 79 ARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTP---AYPPFFHLLSATQ-------RE 128
Query: 212 NFLLDP------KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 265
+D +E +R ++LC+P NP G V+ L+E+ + ++ VL
Sbjct: 129 GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXVFAPEWLNELCDLAHRY-DARVL 187
Query: 266 SDEIYEHIIYAPATHTSFASLPGMWERT-LTVNGFSKAFAMTGWRLGYI-----AGPKHF 319
DEI+ +++ HT A + +T+ S A+ + G + I + +H+
Sbjct: 188 VDEIHAPLVF-DGQHTVAAGVSDTAASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHW 246
Query: 320 VAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSF-GELE 378
++ GAS++ + +++ V + DFL+ +
Sbjct: 247 ----QQLSPVIKDGASTLG---LIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIP 299
Query: 379 GVKMSEPQGAFYLFIDF--STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 436
G K++ Q + +IDF +T GS +E + ++KA+VA G FG+D
Sbjct: 300 GAKITPXQATYLXWIDFRDTTIEGSPSE-------------FFIEKAKVAXNDGAWFGED 346
Query: 437 TC--IRISYAASLTTLQAAVERIKKGL 461
R+++A S L+ A++R K +
Sbjct: 347 GTGFCRLNFATSREVLEEAIDRXAKAV 373
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 97 IRLAAGE-PDFDTPVLIAE--AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 153
IRL E P + L+A+ A ++ I RY P +ELR + + ++ G++ T
Sbjct: 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRY-PERDAVELRDELAAYITKQTGVAVT 91
Query: 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 213
D + +NG+ + + Q + A PG + P + +P +A+ T I +R +F
Sbjct: 92 RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIAVSR-GADF 149
Query: 214 LLDPKV-LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
+D V LE ++ ++ + +P+NPTG V LD++ RI+ P ++++ DE Y
Sbjct: 150 RIDMDVALEEIRAKQPDIVFVTTPNNPTGDV---TSLDDVERIINVAPGIVIV-DEAYAE 205
Query: 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 323
+P+ T P + + S AF G RLGY F+ A
Sbjct: 206 FSPSPSATTLLEKYP---TKLVVSRTMSXAFDFAGGRLGYFVANPAFIDAV 253
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 174 VCSPGDEVIIPAPFWVSYPEMARIADA--TPVILPTRISENFLLDPKVLESKLTEKSRLL 231
+ GD++ I P + Y + + D V L + ++ ++P +E + L
Sbjct: 189 LLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKAL 248
Query: 232 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 291
I+ +P+NPT + N L+ I + V K+P+L ++SDE+Y + P + ++ +P
Sbjct: 249 IVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYG--AFVPNFKSIYSVVP---Y 303
Query: 292 RTLTVNGFSKAFAMTGWRLGYIA 314
T V +S F TGWRLG IA
Sbjct: 304 NTXLVYSYSXLFGCTGWRLGVIA 326
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 173 AVCSPGDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 229
+ GD+V I P + Y PE+A+ A V + S N+ L+ KL + +
Sbjct: 189 GLLKAGDKVAIGMPVFTPYIEIPELAQYA-LEEVAINADPSLNWQYPDSELD-KLKDPAI 246
Query: 230 LLILC-SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLP 287
+ C +PSNP + L+ + IVA+H P L++L+D++Y +A + FA P
Sbjct: 247 KIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADDFQSLFAICP 304
Query: 288 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKIQ 327
E TL V FSK F TGWRLG +A + F A +K+Q
Sbjct: 305 ---ENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQ 343
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 173 AVCSPGDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 229
+ GD+V I P + Y PE+A+ A V + S N+ L+ KL + +
Sbjct: 189 GLLKAGDKVAIGMPVFTPYIEIPELAQYA-LEEVAINADPSLNWQYPDSELD-KLKDPAI 246
Query: 230 LLILC-SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLP 287
+ C +PSNP + L+ + IVA+H P L++L+D++Y +A + FA P
Sbjct: 247 KIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADDFQSLFAICP 304
Query: 288 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKIQ 327
E TL V FSK F TGWRLG +A + F A +K+Q
Sbjct: 305 ---ENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQ 343
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 158/353 (44%), Gaps = 34/353 (9%)
Query: 95 SVIRLAAGEPDFDT-PVLIAEAGINAIREGFT----RYTPNAGTLELRSAICHKLKEENG 149
+I LA G P+ T P I + I E + +Y G LR + L + G
Sbjct: 77 DIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYG 136
Query: 150 LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI 209
+S D I++++G++Q++ +PGD V++ AP +++ + + + +P
Sbjct: 137 ISQDND-IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPL-- 193
Query: 210 SENFLLDPKVLESKLTE-----KSRLLILCSPS--NPTGSVYPKNLLDEIARIVAKHPRL 262
++ + ++LE KL E K ++ P+ NP G ++ + + +++
Sbjct: 194 -DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYD-F 251
Query: 263 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 322
+V+ D+ Y + Y+ +L R + + FSK A G+R+G++ G +
Sbjct: 252 IVVEDDPYGELRYSGNPEKKIKALDNE-GRVIYLGTFSKILA-PGFRIGWMVGDPGIIRK 309
Query: 323 CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGEL--EGV 380
+I Q T +++ + + + ++ K ++ RRD ++++ E EGV
Sbjct: 310 M-EIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV 368
Query: 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433
K ++P+G ++++ I++ + L R + K VA VPG+AF
Sbjct: 369 KWTKPEGGMFIWVTLPD----------GIDSKKMLERAI--KKGVAYVPGEAF 409
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 146/360 (40%), Gaps = 47/360 (13%)
Query: 122 EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 181
EG+ Y G LR AI + L +++ VS+GA+ I + L + S +
Sbjct: 103 EGYRGYGLEQGNKTLRKAIAETFYRD--LHVKSNEVFVSDGAQSDISRLQLLLGS-NVTI 159
Query: 182 IIPAPFWVSYPEMARIADATP------------VILPTRISENFLLDPKVLESKLTEKSR 229
+ P + +Y + + I T V +P + +F D +T ++
Sbjct: 160 AVQDPTFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPD-----LAMTPRTD 214
Query: 230 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 289
++ CSP+NPTG V + L ++ AK +++ D Y I + S +PG
Sbjct: 215 VIFFCSPNNPTGYVASRKQLHQLVDF-AKTNGSIIIFDSAYAAFI-EDGSPRSIYEIPGA 272
Query: 290 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--------CNKIQSQFTSGASSISQKX 341
E + V+ FSK TG RLG+ P + + ++I + +GAS+I+Q
Sbjct: 273 REVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQ-- 330
Query: 342 XXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 401
+ + + ++E R L+ + L G+K+ A YL++ F
Sbjct: 331 AGGLACLSSGGLKEIRSVNNYYKENRKILMDTLVSL-GLKVYGGVNAPYLWVHF------ 383
Query: 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISYAASLTTLQAAVERIKK 459
K S + +L+ + VPG F G + +RIS + A +R++
Sbjct: 384 ------KGSKSWDVFNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHIVEASKRLQN 437
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 158/353 (44%), Gaps = 34/353 (9%)
Query: 95 SVIRLAAGEPDFDT-PVLIAEAGINAIREGFT----RYTPNAGTLELRSAICHKLKEENG 149
+I LA G P+ T P I + I E + +Y G LR + L + G
Sbjct: 32 DIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYG 91
Query: 150 LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI 209
+S D I++++G++Q++ +PGD V++ AP +++ + + + +P
Sbjct: 92 ISQDND-IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPL-- 148
Query: 210 SENFLLDPKVLESKLTE-----KSRLLILCSPS--NPTGSVYPKNLLDEIARIVAKHPRL 262
++ + ++LE KL E K ++ P+ NP G ++ + + +++
Sbjct: 149 -DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYD-F 206
Query: 263 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 322
+V+ D+ Y + Y+ +L R + + FSK A G+R+G++ G +
Sbjct: 207 IVVEDDPYGELRYSGNPEKKIKALDNE-GRVIYLGTFSKILA-PGFRIGWMVGDPGIIRK 264
Query: 323 CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGEL--EGV 380
+I Q T +++ + + + ++ K ++ RRD ++++ E EGV
Sbjct: 265 M-EIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV 323
Query: 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433
K ++P+G ++++ I++ + L R + K VA VPG+AF
Sbjct: 324 KWTKPEGGMFIWVTLPD----------GIDSKKMLERAI--KKGVAYVPGEAF 364
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 137/334 (41%), Gaps = 54/334 (16%)
Query: 155 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN-- 212
D + ++G +I V SPGD++++ P + + + + VI I EN
Sbjct: 86 DWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIE-GNGRRVISSDLIYENSK 144
Query: 213 FLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 271
+ ++ LE KL S R + C+P NP G + + + IA + AKH ++L++SDEI+
Sbjct: 145 YSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKH-QVLLISDEIHG 203
Query: 272 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-----VAACNKI 326
++ T F+ + W + I+ F AAC I
Sbjct: 204 DLVLTDEDITP---------------AFTVDWDAKNWVVSLISPSXTFNLAALHAACAII 248
Query: 327 ----------QSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRER----RDFLVK 372
+S F +G + + + ++ + R+ R+FL K
Sbjct: 249 PNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAK 308
Query: 373 SFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 432
E+ VK+ + ++ ++D S G N+E C+YL +K + + G+
Sbjct: 309 ---EVPEVKVLDSNASYLAWVDIS--------ALGX--NAEDFCKYLREKTGLIISAGNG 355
Query: 433 FGDD--TCIRISYAASLTTLQAAVERIKKGLLTL 464
+ + +RI+ A + +R+K+G+L L
Sbjct: 356 YRGNGHEFVRINLACPKELVIDGXQRLKQGVLNL 389
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 36/324 (11%)
Query: 96 VIRLAAGE-----PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGL 150
VI L G+ P+ T + +A + EG++ Y G LR+AI GL
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFY--GGL 115
Query: 151 SYTPDQILVSNGAKQSI--LQAVLAVCSPGDEVIIPA--PFWVSYPE----MARIADATP 202
D + VS+GAK I LQ + G V I P + +Y + M +
Sbjct: 116 GIGDDDVFVSDGAKCDISRLQVMF-----GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNT 170
Query: 203 VILPTRISENFLLDPK---VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 259
+ E P+ + ++ ++ CSP+NPTG+ + L ++ K+
Sbjct: 171 DVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN 230
Query: 260 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 319
++V D Y + + F +PG E + FSK TG RLG+ PK
Sbjct: 231 GSIIVY-DSAYAMYMSDDNPRSIF-EIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKL 288
Query: 320 VAA--------CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLV 371
+ + N+I +GAS+ISQ E + K++ ++E + ++
Sbjct: 289 LYSDGFPVAKDFNRIICTCFNGASNISQ--AGALACLTPEGLEAMHKVIGFYKENTNIII 346
Query: 372 KSFGELEGVKMSEPQGAFYLFIDF 395
+F L G + + A Y+++ F
Sbjct: 347 DTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 171 VLAVCSPGDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
V + GD+V I P + Y PE+A+ A V + + N+ L+ KL +
Sbjct: 187 VNGLLKAGDKVAIGMPVFTPYIEIPELAQYA-LEEVAINADPALNWQYPDSELD-KLKDP 244
Query: 228 SRLLILC-SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFAS 285
+ + C +PSNP + L+ + +IVA+H P L++L+D++Y +A + FA
Sbjct: 245 AIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVYG--TFADGFQSLFAI 302
Query: 286 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318
P TL V FSK F TGWRLG +A K
Sbjct: 303 CPA---NTLLVYSFSKYFGATGWRLGVVAAHKE 332
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 131/324 (40%), Gaps = 36/324 (11%)
Query: 96 VIRLAAGE-----PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGL 150
VI L G+ P+ T + +A + EG++ Y G LR+AI GL
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFY--GGL 115
Query: 151 SYTPDQILVSNGAKQSI--LQAVLAVCSPGDEVIIPA--PFWVSYPE----MARIADATP 202
D + VS+GAK I LQ + G V I P + +Y + M +
Sbjct: 116 GIGDDDVFVSDGAKCDISRLQVMF-----GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNT 170
Query: 203 VILPTRISENFLLDPK---VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 259
+ E P+ + ++ ++ CSP+NPTG+ + L ++ K+
Sbjct: 171 DVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN 230
Query: 260 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 319
++V D Y + + F +PG E + FS+ TG RLG+ PK
Sbjct: 231 GSIIVY-DSAYAMYMSDDNPRSIF-EIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKL 288
Query: 320 VAA--------CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLV 371
+ + N+I +GAS+ISQ E + K++ ++E + ++
Sbjct: 289 LYSDGFPVAKDFNRIICTCFNGASNISQ--AGALACLTPEGLEAMHKVIGFYKENTNIII 346
Query: 372 KSFGELEGVKMSEPQGAFYLFIDF 395
+F L G + + A Y+++ F
Sbjct: 347 DTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 154 PDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISEN 212
P+Q+LVS GA + I + A C PG D ++ P + Y A +PT +N
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTL--DN 132
Query: 213 FLLDPKVLESKLTEKSRLLILCSPSNPTGS-VYPKNL--LDEIARIVAKHPRLLVLSDEI 269
+ LD + + KL + +++ +CSP+NPTG + P++ L E+ R + +V++DE
Sbjct: 133 WQLDLQGISDKL-DGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-----GKAIVVADEA 186
Query: 270 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 326
Y I + P S A + + SKAFA+ G R G+ + + K+
Sbjct: 187 Y--IEFCP--QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLXKV 239
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 36/324 (11%)
Query: 96 VIRLAAGE-----PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGL 150
VI L G+ P+ T + +A + EG++ Y G LR+AI GL
Sbjct: 58 VISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFY--GGL 115
Query: 151 SYTPDQILVSNGAKQSI--LQAVLAVCSPGDEVIIPA--PFWVSYPE----MARIADATP 202
D + VS+GAK I LQ + G V I P + +Y + M +
Sbjct: 116 GIGDDDVFVSDGAKCDISRLQVMF-----GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNT 170
Query: 203 VILPTRISENFLLDPK---VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 259
+ E P+ + ++ ++ CSP+NPTG+ + L ++ K+
Sbjct: 171 DVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN 230
Query: 260 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 319
++V D Y + + F +PG E + FS TG RLG+ PK
Sbjct: 231 GSIIVY-DSAYAMYMSDDNPRSIF-EIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKL 288
Query: 320 VAA--------CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLV 371
+ + N+I +GAS+ISQ E + K++ ++E + ++
Sbjct: 289 LYSDGFPVAKDFNRIICTCFNGASNISQ--AGALACLTPEGLEAMHKVIGFYKENTNIII 346
Query: 372 KSFGELEGVKMSEPQGAFYLFIDF 395
+F L G + + A Y+++ F
Sbjct: 347 DTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 156 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 215
++L+ NG+ + I LA PG +V P P +V Y A+ A V +P R +F L
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLR--ADFTL 144
Query: 216 D-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHI 273
D L + + ++ L P+NPTG+++ + I R R LV+ DE Y+
Sbjct: 145 DRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQ-- 202
Query: 274 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 331
P S+ S + L SK + G RLGY+AG ++ +K++ +
Sbjct: 203 ---PFAQESWXSRLTDFGNLLVXRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYN 256
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 154 PDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISEN 212
P+Q+LVS GA + I + A C PG D ++ P + Y A +PT +N
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DN 132
Query: 213 FLLDPKVLESKLTEKSRLLILCSPSNPTGS-VYPKNL--LDEIARIVAKHPRLLVLSDEI 269
+ LD + + KL + +++ +CSP+NPTG + P++ L E+ R + +V++DE
Sbjct: 133 WQLDLQGISDKL-DGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-----GKAIVVADEA 186
Query: 270 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 326
Y I + P S A + + SKAFA+ G R G+ + + K+
Sbjct: 187 Y--IEFCP--QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKV 239
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 178 GDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILC-S 235
GD+V I P + Y E+ +A +P +N KL + + C +
Sbjct: 193 GDKVAIGMPVFTPYIEIPELAQYDLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFFCVN 252
Query: 236 PSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 294
PSNP + LD + IVA+ P LL+L+D++Y +A + F+ P TL
Sbjct: 253 PSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYG--TFADEFQSLFSVCP---RNTL 307
Query: 295 TVNGFSKAFAMTGWRLGYIAGPKHFV 320
V FSK F TGWRLG IA K V
Sbjct: 308 LVYSFSKYFGATGWRLGVIAAHKDNV 333
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 11/250 (4%)
Query: 97 IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ 156
+ L GEP F+TP I +A N Y +A LR+A K + ++
Sbjct: 26 LDLGIGEPQFETPKFIQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENE 84
Query: 157 ILVSNGAKQSILQ--AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 214
++ + G+++ + + + + P PF+ Y A+ A ++ P +F
Sbjct: 85 LISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTKENDF- 143
Query: 215 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 274
P + E +L E L+IL SP+NPTG L ++ KH +L+ +DE Y I
Sbjct: 144 -TPSLNEKELQEVD-LVILNSPNNPTGRTLSLEELISWVKLALKHDFILI-NDECYSEIY 200
Query: 275 --YAPATHTSFASLPG--MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330
P + L G ++ L ++ SK + G R G+IAG + ++
Sbjct: 201 ENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYL 260
Query: 331 TSGASSISQK 340
+++ QK
Sbjct: 261 GYTSANAIQK 270
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 141/377 (37%), Gaps = 43/377 (11%)
Query: 51 RVMACSGV----EEVQVDVSLSPRVNAVKPSK-----TVAITDQATALAQAGVSVIRLAA 101
RV C V E+++ +S N K +A A L VI L
Sbjct: 4 RVNTCKCVATPQEKIEYKTKVSRNSNXSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGI 63
Query: 102 GEPDFDTPVLIAEAGINAIRE-----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ 156
G+ P +I A E G++ Y G LR+AI GL D
Sbjct: 64 GDTTEPIPEVITSAXAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFY--GGLGIGDDD 121
Query: 157 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV----------ILP 206
+ VS+GAK I + + S + + P + +Y + + I T I
Sbjct: 122 VFVSDGAKCDISRLQVXFGS-NVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEY 180
Query: 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 266
R + P + ++ ++ CSP+NPTG+ + L ++ K+ ++V
Sbjct: 181 XRCTPENGFFPDL---STVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVY- 236
Query: 267 DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA---- 322
D Y + F +PG E FSK TG RLG+ PK + +
Sbjct: 237 DSAYAXYXSDDNPRSIF-EIPGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP 295
Query: 323 ----CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELE 378
N+I +GAS+ISQ E K++ ++E + ++ +F L
Sbjct: 296 VAKDFNRIICTCFNGASNISQ--AGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSL- 352
Query: 379 GVKMSEPQGAFYLFIDF 395
G + + A Y+++ F
Sbjct: 353 GYDVYGGKNAPYVWVHF 369
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 138/341 (40%), Gaps = 42/341 (12%)
Query: 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI-LQAVLAVCSPGDEVIIPA 185
Y+ + G LR AI + +G D I +++GA + L L + + D +++P
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 186 PFWVSYPEMARIADATPVILPTRISEN--FLLDPKVLESKLTEKS------RLLILCSPS 237
P + Y A IA ++P ++E+ + L+ ++ +L + R L++ +P
Sbjct: 190 PQYPLYS--ASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247
Query: 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP------GMWE 291
NPTG V + +I + K+ L++L+DE+Y+ IY + F S G E
Sbjct: 248 NPTGQVLAEENQYDIVKF-CKNEGLVLLADEVYQENIY--VDNKKFHSFKKIVRSLGYGE 304
Query: 292 RTLTVNGFSKA----FAMTGWRLGY-----IAGPKH-------FVAACNKIQSQFTSGAS 335
L + + + G R GY + P V C+ I Q +
Sbjct: 305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQIL---A 361
Query: 336 SISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--I 393
S+ ++ + R L +F +LEG+ +E +GA Y+F I
Sbjct: 362 SLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQI 421
Query: 394 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 434
A+ K ++ R LL+ + +VPG FG
Sbjct: 422 CLPQKAIEAAKAANKAPDAFYALR-LLESTGIVVVPGSGFG 461
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 24/283 (8%)
Query: 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI-LP 206
N +++ P+ ++++ GA + + + PG+ V+IP P++ + + ++ +
Sbjct: 105 NKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIH 164
Query: 207 TRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 260
S F + LE E + + +++ +PSNP G+ +N L + V +
Sbjct: 165 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV-EDK 223
Query: 261 RLLVLSDEIYEHIIYAPATHTSFASL---------PGMWERTLTVNGFSKAFAMTGWRLG 311
+ ++SDEIY ++ + S + +W+R V SK + G+R+G
Sbjct: 224 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283
Query: 312 YIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLV 371
I V A S F SS +Q +++ K ++R+ LV
Sbjct: 284 AIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLV 342
Query: 372 KSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 409
+ G+ + ++D S + +E E + KI
Sbjct: 343 SGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 384
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 24/283 (8%)
Query: 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI-LP 206
N +++ P+ ++++ GA + + + PG+ V+IP P++ + + ++ +
Sbjct: 105 NKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIH 164
Query: 207 TRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 260
S F + LE E + + +++ +PSNP G+ +N L + V +
Sbjct: 165 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV-EDK 223
Query: 261 RLLVLSDEIYEHIIYAPATHTSFASL---------PGMWERTLTVNGFSKAFAMTGWRLG 311
+ ++SDEIY ++ + S + +W+R V SK + G+R+G
Sbjct: 224 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283
Query: 312 YIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLV 371
I V A S F SS +Q +++ K ++R+ LV
Sbjct: 284 AIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLV 342
Query: 372 KSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 409
+ G+ + ++D S + +E E + KI
Sbjct: 343 SGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 384
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 24/283 (8%)
Query: 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI-LP 206
N +++ P+ ++++ GA + + + PG+ V+IP P++ + + ++ +
Sbjct: 103 NKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIH 162
Query: 207 TRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 260
S F + LE E + + +++ +PSNP G+ +N L + V +
Sbjct: 163 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV-EDK 221
Query: 261 RLLVLSDEIYEHIIYAPATHTSFASL---------PGMWERTLTVNGFSKAFAMTGWRLG 311
+ ++SDEIY ++ + S + +W+R V SK + G+R+G
Sbjct: 222 GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 281
Query: 312 YIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLV 371
I V A S F SS +Q +++ K ++R+ LV
Sbjct: 282 AIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLV 340
Query: 372 KSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 409
+ G+ + ++D S + +E E + KI
Sbjct: 341 SGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 382
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 13 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 69
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 70 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMII 129
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 130 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 188
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNSGRVPTFL 247
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FSK + +G R+G++ GPK +
Sbjct: 248 SM-DVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 13 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 69
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 70 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII 129
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 130 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 188
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNSGRVPTFL 247
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FSK + +G R+G++ GPK +
Sbjct: 248 SM-DVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 148/397 (37%), Gaps = 87/397 (21%)
Query: 113 AEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 172
A G+N IRE Y + + G+ PD I ++ GA I +
Sbjct: 127 ASQGVNCIREDVAAYI---------------TRRDGGVPADPDNIYLTTGASDGISTILK 171
Query: 173 AVCSPGDE----VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK---------- 218
+ S G + V+IP P + Y + DA V N+ LD +
Sbjct: 172 ILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQV--------NYYLDEENCWALNVNEL 223
Query: 219 ---VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 275
V E+K ++L + +P NPTG V + ++++ A +L +L+DE+Y+ +Y
Sbjct: 224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHF-AWEEKLFLLADEVYQDNVY 282
Query: 276 APAT--HTSFASLPGM---WERTLTVNGF---SKAF-AMTGWRLGY-------------- 312
+P H+ L M + + + F SK + G+R GY
Sbjct: 283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQL 342
Query: 313 -------IAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRE 365
+ P AA + + + +G S Q V+ + K +
Sbjct: 343 VKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQ--------FSREKESVLGNLAKKAKL 394
Query: 366 RRDFLVKSFGELEGVKMSEPQGAFYLFID-FSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424
D F ++ G+ + QGA Y F F EA ++ C LL++
Sbjct: 395 TEDL----FNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETG 450
Query: 425 VALVPGDAFGDDTC---IRISYAASLTTLQAAVERIK 458
+ +VPG FG R++ + L+ ++++K
Sbjct: 451 ICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVK 487
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 13 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 69
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 70 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII 129
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 130 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 188
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFL 247
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FSK + +G R+G++ GPK +
Sbjct: 248 SM-DVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 13 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 69
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 70 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII 129
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 130 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 188
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFL 247
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FSK + +G R+G++ GPK +
Sbjct: 248 SM-DVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 13 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 69
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 70 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII 129
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 130 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 188
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFL 247
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FSK + +G R+G++ GPK +
Sbjct: 248 SM-DVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 18/277 (6%)
Query: 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI-LP 206
N +++ P+ ++++ GA + + + PG+ V+IP P++ + + ++ +
Sbjct: 88 NKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIH 147
Query: 207 TRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 260
S F + LE E + + +++ +PSNP G+ +N L + V +
Sbjct: 148 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV-EDK 206
Query: 261 RLLVLSDEIYEHIIYAPATHTSFASL--PGMWERTLTVNGFS-KAFAMTGWRLGYIAGPK 317
+ ++SDEIY ++ + S + +W+R V S K + G+R+G I
Sbjct: 207 GIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSXKDLGLPGFRVGAIYSND 266
Query: 318 HFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGEL 377
V A S F SS +Q +++ K ++R+ LV +
Sbjct: 267 DMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL-QK 324
Query: 378 EGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 409
G+ + ++D S + +E E + KI
Sbjct: 325 SGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 361
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 13 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 69
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 70 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII 129
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 130 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 188
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFL 247
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FS + +G R+G++ GPK +
Sbjct: 248 SM-DVDGRVIRADSFSXIIS-SGLRIGFLTGPKPLI 281
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPD-----FDTPVLIAEAG--INAIREGFT 125
A PS +TD L++ S+I LA G P+ F T V+ E G I E
Sbjct: 15 ARNPSPIRTMTD---ILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK 71
Query: 126 R---YTPNAGTLELRSAICH---KLKEENGLSYTPDQ----ILVSNGAKQSILQAVLAVC 175
R Y+P+AG EL S + KL + Y P Q + V++G++Q + + +
Sbjct: 72 RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII 131
Query: 176 SPGDEVIIPAPFWVS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEK 227
+PGD V++ P + +P + +A I+P + + L K ++K +K
Sbjct: 132 NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQK 190
Query: 228 SR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284
+ L + + +NPTG+ EI + K+ L++ D+ Y + + +F
Sbjct: 191 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFL 249
Query: 285 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320
S+ + R + + FS + +G R+G++ GPK +
Sbjct: 250 SM-DVDGRVIRADSFSXIIS-SGLRIGFLTGPKPLI 283
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 28/237 (11%)
Query: 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 212
+ + + V NGA + I +L D + P + Y A+ A + +P
Sbjct: 87 SKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVP------ 136
Query: 213 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
D ++ E + E ++ + +P+NPTG V+ + +EI RI+ K + L + YE
Sbjct: 137 LTKDLRIPEVNVGEGD-VVFIPNPNNPTGHVFER---EEIERIL-KTGAFVALDEAYYEF 191
Query: 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332
S+ +E + FSKAF++ R+GY+ + F+ A N+++ F
Sbjct: 192 ------HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPF-- 243
Query: 333 GASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 389
S +SQ E+ + K E R+ + + E+ G ++++ +G F
Sbjct: 244 NVSYVSQ----MFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRITDSRGNF 295
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 28/237 (11%)
Query: 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 212
+ + + V NGA + I +L D + P + Y A+ A + +P
Sbjct: 75 SKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVP------ 124
Query: 213 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
D ++ E + E ++ + +P+NPTG V+ + +EI RI+ K + L + YE
Sbjct: 125 LTKDLRIPEVNVGEGD-VVFIPNPNNPTGHVFER---EEIERIL-KTGAFVALDEAYYEF 179
Query: 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332
S+ +E + FSKAF++ R+GY+ + F+ A N+++ F
Sbjct: 180 ------HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPF-- 231
Query: 333 GASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 389
S +SQ E+ + K E R+ + + E+ G ++++ +G F
Sbjct: 232 NVSYVSQ----MFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRITDSRGNF 283
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 129 PNAGTLELR-SAICHKLKEENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 185
P+ L + SA KL+E G + P I+ +NG+ + + + A + G+E+
Sbjct: 54 PDGAALRIYPSASSQKLREVAGELYGFDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVH 113
Query: 186 PFWVSYPEMARIADATPVILPTRISENFLLD--PKVLESKLTEKSRLLILCSPSNPTGSV 243
P + Y +A + A + ++ +F + P+ E K+ L +P+ P G
Sbjct: 114 PSYSYYGTLAEVQGAR--VRTFGLTGDFRIAGFPERYEGKV------FFLTTPNAPLGPS 165
Query: 244 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 303
+P +DE+AR A LVL + YA ++ L E + SK++
Sbjct: 166 FPLEYIDELARRCAGX---LVLDE------TYAEFAESNALELVRRHENVVVTRTLSKSY 216
Query: 304 AMTGWRLGYIAGPKHFVAACNKIQSQFT 331
++ G R+G +AA +KI+ +
Sbjct: 217 SLAGXRIGLAIARPEVIAALDKIRDHYN 244
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 105 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164
DF T I EA + G Y+ E +AI H ++ + ++
Sbjct: 39 DFATAPCIIEALNQRLMHGVFGYSRWKND-EFLAAIAHWFSTQHYTAIDSQTVVYGPSVI 97
Query: 165 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT--PVILPTRISENFLLDPKVLES 222
+ + + G+ V+I P + ++ + T PV L + ++ + D LE+
Sbjct: 98 YMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQ-ADGWFCDMGKLEA 156
Query: 223 KLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 281
L + + ++++LCSP NPTG V+ + L+ +A + +H + V+SDEI+ +++ H
Sbjct: 157 VLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHG-VRVISDEIHMDMVWGEQPHI 215
Query: 282 SFASLP-GMWERTLTVNGFSKAF---AMTG 307
++++ G W L +G SK+F A+TG
Sbjct: 216 PWSNVARGDW--ALLTSG-SKSFNIPALTG 242
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 212
+ + + V NGA + I L D + P + Y A+ A + +P
Sbjct: 75 SKNNVSVGNGADEIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVP------ 124
Query: 213 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
D ++ E + E ++ + +P+NPTG V+ + +EI RI+ K + L + YE
Sbjct: 125 LTKDLRIPEVNVGEGD-VVFIPNPNNPTGHVFER---EEIERIL-KTGAFVALDEAYYEF 179
Query: 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332
S+ +E + FSKAF++ R+GY+ + F+ A N+++ F
Sbjct: 180 ------HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPF-- 231
Query: 333 GASSISQ 339
S +SQ
Sbjct: 232 NVSYVSQ 238
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 22/261 (8%)
Query: 75 KPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR--YTPNAG 132
+P K + + + + + VI+LA+ E F TP I +R+ + P+
Sbjct: 15 EPGKDIEVIAKEYGVKE----VIKLASNENPFGTP----PKAIECLRQNANKAHLYPDDS 66
Query: 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP 192
+EL+S + K K +N + I++ G+ Q I A+ + + + + + Y
Sbjct: 67 XIELKSTLAQKYKVQN------ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYE 120
Query: 193 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252
A+ A I+ N K+ E+ E +L+ LC P+NP G + E
Sbjct: 121 IYAKQCGA-KCYKTQSITHNLDEFKKLYETHKDE-IKLIFLCLPNNPLGECLDASEATEF 178
Query: 253 ARIVAKHPRLLVLSDEIYEHI--IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 310
+ V + LV+ D Y H L ++ L + FS + + G R+
Sbjct: 179 IKGV--NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRI 236
Query: 311 GYIAGPKHFVAACNKIQSQFT 331
GY + ++A K+++ F
Sbjct: 237 GYGIANANIISAFYKLRAPFN 257
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 143/358 (39%), Gaps = 44/358 (12%)
Query: 90 AQAGVSVI-RLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC--HKLKE 146
A+ G++ I +L++ E T +A N+ E T P+ LR + ++L+E
Sbjct: 27 AELGLTKITKLSSNENPLGTSKKVAAIQANSSVE--TEIYPDGWASSLRKEVADFYQLEE 84
Query: 147 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 206
E +++ + G + I + + P +V Y + A I A +P
Sbjct: 85 E--------ELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNALIEGAEVREIP 136
Query: 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVL 265
L+ + + + EK+ ++ +C+P+NPTG+ L +I + + P +LV+
Sbjct: 137 LLQDGEHDLEGXL--NAIDEKTTIVWICNPNNPTGNYIE---LADIQAFLDRVPSDVLVV 191
Query: 266 SDEIY-EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 324
DE Y E++ P H L ++ + FSK + + R+GY K + N
Sbjct: 192 LDEAYIEYVTPQPEKH---EKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLN 248
Query: 325 KIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 384
++ F + +SI QK E + ++ F K F E VK+
Sbjct: 249 IVRPPFNT--TSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAF-AKRF---EKVKLYP 302
Query: 385 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 442
G F L ID G+ F +E + + R G A G T +RI+
Sbjct: 303 ANGNFVL-IDLGIEAGT---IFSYLEKNGYITR-----------SGAALGFPTAVRIT 345
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 188
P+AGTL R + + +N + ILV+NG + Q +A G +I P +
Sbjct: 50 PDAGTL--RQXLAKRNSVDN------NAILVTNGPTAAFYQ--IAQAFRGSRSLIAIPSF 99
Query: 189 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 248
Y + R + P+ + + E+ + LC+P+NP G + +
Sbjct: 100 AEYEDACRXYEHEVCFYPS--------NEDIGEADFSNXD-FCWLCNPNNPDGRLLQRT- 149
Query: 249 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308
EI R++ HP + D+ Y + + A + G + + V FS A+ + G
Sbjct: 150 --EILRLLNDHPDTTFVLDQSY--VSFTTEEVIRPADIKGR-KNLVXVYSFSHAYGIPGL 204
Query: 309 RLGYIAGPKHF 319
R+GYI K F
Sbjct: 205 RIGYIVANKDF 215
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 157/390 (40%), Gaps = 43/390 (11%)
Query: 65 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDT--PVLIAEAGINAIRE 122
V+L +++ + + +I + A A I G PD +T +AE I +
Sbjct: 15 VNLEGKISKIGQNXKSSIIREILKFA-ADKDAISFGGGVPDPETFPRKELAEIAKEIIEK 73
Query: 123 GF---TRYTPNAGTLELRSAICHKLKEENGLS-YTPDQILVSNGAKQSILQAVLAVCSPG 178
+ +Y+ G L+ I L+ G++ D ++ + G++Q++ ++
Sbjct: 74 EYHYTLQYSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQAL--DLIGKLFLD 131
Query: 179 DE--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR------- 229
DE ++ P ++ R A V++P E+ D VLE KL+E +
Sbjct: 132 DESYCVLDDPAYLGAINAFRQYLANFVVVPL---EDDGXDLNVLERKLSEFDKNGKIKQV 188
Query: 230 --LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 287
+ ++ + NP G + I K+ L ++ D+ Y + Y T +
Sbjct: 189 KFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYD-LFIVEDDPYGALRYEGETVDPIFKIG 247
Query: 288 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXX 347
G ER + +N FSK A G R+G +AG K F+ + + + +I+ +
Sbjct: 248 GP-ERVVLLNTFSKVLA-PGLRIGXVAGSKEFIRKIVQAKQSADLCSPAITHR-LAARYL 304
Query: 348 XXXXXXEVVSKMVKAFRERR----DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 403
E + ++ +R +R + L + F ++ GVK + +G ++++
Sbjct: 305 ERYDLLEQLKPTIELYRRKRTVXLNALEEYFSDIPGVKWVKSEGGLFIWLTL-------P 357
Query: 404 EGFGKIENSESLCRYLLDKAQVALVPGDAF 433
EGF E E R +V VPG F
Sbjct: 358 EGFDTWEXFEYAKR-----KKVFYVPGRVF 382
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 157 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 216
IL++ G+ + I A+ A S +++IP + A+IA + + +N+ D
Sbjct: 71 ILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXK--VTKVKXLDNWAFD 128
Query: 217 PKVLESKLTEKS--RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 274
+ L++ + S ++ L +P+NPTG++ P ++++ I +K + DE Y +
Sbjct: 129 IEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPW--IASKPANTXFIVDEAYAEFV 186
Query: 275 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312
P + + E + + FSK A G R+GY
Sbjct: 187 NDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGY 224
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 231 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF-ASLPGM 289
++L +PSNPTG LD++ + K +L DE Y ++SF A
Sbjct: 139 VVLANPSNPTGQALSAGELDQLRQRAGK-----LLIDETY-------VDYSSFRARGLAY 186
Query: 290 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 327
E L FSK++ + G RLG + GP +AA + Q
Sbjct: 187 GENELVFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQ 224
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 108 TPVLIAEAGINAIREGFTRY--TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165
P+ I ++ +N I EG P+ L +I EN L I++ NGA +
Sbjct: 36 NPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSI------ENYLKLKDIGIVLGNGASE 89
Query: 166 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 225
I ++ S ++++I P + Y A+ + V + + EN +D + + SK+
Sbjct: 90 IIELSI----SLFEKILIIVPSYAEYEINAKKHGVSVVF--SYLDENMCIDYEDIISKID 143
Query: 226 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285
+ ++I +P+NP G + K + ++ + + +++ + E + +SF
Sbjct: 144 DVDSVII-GNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIE---FTGDPSSSFVG 199
Query: 286 LPGMWERTLTVNGFSKAFAMTGWRLGY 312
+ + +K FAM G R GY
Sbjct: 200 EIKNYSCLFIIRAMTKFFAMPGIRFGY 226
>pdb|2C7T|A Chain A, Crystal Structure Of The Plp-Bound Form Of Btrr, A Dual
Functional Aminotransferase Involved In Butirosin
Biosynthesis.
pdb|2C81|A Chain A, Crystal Structures Of The Plp- And Pmp-Bound Forms Of
Btrr, A Dual Functional Aminotransferase Involved In
Butirosin Biosynthesis
Length = 418
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 178 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 237
GDEVI+P+ W++ +A PV + ++ + +DP++++S +T+K++ +I P
Sbjct: 82 GDEVIVPSLTWIATATAVLNVNALPVFVDVE-ADTYCIDPQLIKSAITDKTKAII---PV 137
Query: 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272
+ GS+ +DEI I +H L V+ D H
Sbjct: 138 HLFGSMAN---MDEINEIAQEH-NLFVIEDCAQSH 168
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 15/232 (6%)
Query: 82 ITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC 141
I + AT L + ++ +A PV + A I+ + + RY P+A L A+
Sbjct: 12 IREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNL-DCIERY-PDADYFHLHQALA 69
Query: 142 HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 201
+ IL NG +SI V + P +I+ P + Y +
Sbjct: 70 RHHQ------VPASWILAGNGETESIF-TVASGLKPRRAMIV-TPGFAEYGRALAQSGCE 121
Query: 202 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261
R ++ + L +LE+ LT L LC+P+NPTG + + LL IA
Sbjct: 122 IRRWSLREADGWQLTDAILEA-LTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNI 180
Query: 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313
L+L + + I + + P +W + +K +A+ G RLGY+
Sbjct: 181 NLILDEAFIDFIPHETGFIPALKDNPHIW----VLRSLTKFYAIPGLRLGYL 228
>pdb|3NU8|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Internal Aldimine
pdb|3NU8|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Internal Aldimine
Length = 359
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 114 EAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ-SILQAV 171
+AGI +R G P LE R L + G Y I +NG I+Q
Sbjct: 19 DAGIQRVLRHGQYILGPEVTELEDR------LADFVGAKYC---ISCANGTDALQIVQMA 69
Query: 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 231
L V PGDEVI P +V+ E + A PV + + LDP++LE+ +T +++ +
Sbjct: 70 LGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAITPRTKAI 127
Query: 232 I 232
I
Sbjct: 128 I 128
>pdb|3NU7|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Cofactor Pmp
pdb|3NU7|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Cofactor Pmp
pdb|3NUB|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With Product
As The External Aldimine
pdb|3NUB|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With Product
As The External Aldimine
Length = 359
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 114 EAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ-SILQAV 171
+AGI +R G P LE R L + G Y I +NG I+Q
Sbjct: 19 DAGIQRVLRHGQYILGPEVTELEDR------LADFVGAKYC---ISCANGTDALQIVQMA 69
Query: 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 231
L V PGDEVI P +V+ E + A PV + + LDP++LE+ +T +++ +
Sbjct: 70 LGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAITPRTKAI 127
Query: 232 I 232
I
Sbjct: 128 I 128
>pdb|3NYU|A Chain A, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|B Chain B, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|C Chain C, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|D Chain D, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
Length = 367
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 114 EAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ-SILQAV 171
+AGI +R G P LE R L + G Y I +NG I+Q
Sbjct: 19 DAGIQRVLRHGQYILGPEVTELEDR------LADFVGAKYC---ISCANGTDALQIVQMA 69
Query: 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 231
L V PGDEVI P +V+ E + A PV + + LDP++LE+ +T +++ +
Sbjct: 70 LGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAITPRTKAI 127
Query: 232 I 232
I
Sbjct: 128 I 128
>pdb|3NYS|A Chain A, X-Ray Structure Of The K185a Mutant Of Wbpe (Wlbe) From
Pseudomonas Aeruginosa In Complex With Plp At 1.45
Angstrom Resolution
pdb|3NYT|A Chain A, X-Ray Crystal Structure Of The Wlbe (Wpbe)
Aminotransferase From Pseudomonas Aeruginosa, Mutation
K185a, In Complex With The Plp External Aldimine Adduct
With Udp-3-Amino-2-N-Acetyl-Glucuronic Acid, At 1.3
Angstrom Resolution
Length = 367
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 114 EAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ-SILQAV 171
+AGI +R G P LE R L + G Y I +NG I+Q
Sbjct: 19 DAGIQRVLRHGQYILGPEVTELEDR------LADFVGAKYC---ISCANGTDALQIVQMA 69
Query: 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 231
L V PGDEVI P +V+ E + A PV + + LDP++LE+ +T +++ +
Sbjct: 70 LGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNLDPQLLEAAITPRTKAI 127
Query: 232 I 232
I
Sbjct: 128 I 128
>pdb|3DR4|A Chain A, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|B Chain B, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|C Chain C, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|D Chain D, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
Length = 391
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 157 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 216
I +NG L V PGDEVI+P+ +++ ATPV++ F LD
Sbjct: 75 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDND-PRTFNLD 133
Query: 217 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267
LE+ +T +++ ++ P + G + + + E+AR +H LLV+ D
Sbjct: 134 AAKLEALITPRTKAIM---PVHLYGQICDMDPILEVAR---RH-NLLVIED 177
>pdb|3DR7|A Chain A, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|B Chain B, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|C Chain C, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|D Chain D, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
Length = 391
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 157 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 216
I +NG L V PGDEVI+P+ +++ ATPV++ F LD
Sbjct: 75 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDND-PRTFNLD 133
Query: 217 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267
LE+ +T +++ ++ P + G + + + E+AR +H LLV+ D
Sbjct: 134 AAKLEALITPRTKAIM---PVHLYGQICDMDPILEVAR---RH-NLLVIED 177
>pdb|3BN1|A Chain A, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|B Chain B, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|C Chain C, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|D Chain D, Crystal Structure Of Gdp-Perosamine Synthase
Length = 373
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 157 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 216
I +NG L V PGDEVI+P+ +++ ATPV++ F LD
Sbjct: 57 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDND-PRTFNLD 115
Query: 217 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267
LE+ +T +++ ++ P + G + + + E+AR +H LLV+ D
Sbjct: 116 AAKLEALITPRTKAIM---PVHLYGQICDMDPILEVAR---RH-NLLVIED 159
>pdb|3FRK|A Chain A, X-Ray Structure Of Qdtb From T. Thermosaccharolyticum In
Complex With A Plp:tdp-3-Aminoquinovose Aldimine
pdb|3FRK|B Chain B, X-Ray Structure Of Qdtb From T. Thermosaccharolyticum In
Complex With A Plp:tdp-3-Aminoquinovose Aldimine
Length = 373
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 178 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 237
GDEVI+P+ +++ A P+ + I + +DP ++ES +TEK++ +I
Sbjct: 76 GDEVIVPSNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAIIAVHLY 134
Query: 238 NPTGSVYPKNLLDEIARIVAKHPRLLV 264
+DEI RI K+ L+
Sbjct: 135 GQPAD------MDEIKRIAKKYNLKLI 155
>pdb|3UWC|A Chain A, Structure Of An Aminotransferase (Degt-Dnrj-Eryc1-Strs
Family) From Coxiella Burnetii In Complex With Pmp
Length = 374
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 178 GDEVIIPAPFWVSYPEMARIADATPVILPTRISEN-FLLDPKVLESKLTEKSRLLILCSP 236
GDEVI A +++ A ATPV++ SEN +++DP+ +E+ +T+K++ + P
Sbjct: 78 GDEVITCANTFIASVGAIVQAGATPVLVD---SENGYVIDPEKIEAAITDKTKAI---XP 131
Query: 237 SNPTGSVYPKNLLDEIAR 254
+ TG++ L +IA+
Sbjct: 132 VHYTGNIADXPALAKIAK 149
>pdb|1MDX|A Chain A, Crystal Structure Of Arnb Transferase With Pyridoxal 5'
Phosphate
pdb|1MDZ|A Chain A, Crystal Structure Of Arnb Aminotransferase With
Cycloserine And Pyridoxal 5' Phosphate
Length = 393
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 178 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 232
GDEVI P+ WVS M + A PV++ + ++ P+ +E+ +T +++ +I
Sbjct: 79 GDEVITPSMTWVSTLNMIVLLGANPVMVDVD-RDTLMVTPEHIEAAITPQTKAII 132
>pdb|2OGE|A Chain A, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|B Chain B, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|C Chain C, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|D Chain D, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
Length = 399
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 176 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF-LLDPKVLESKLTEKSRLLI 232
PGDEVI+P+ +++ ATPV P E+ LDP ++E +T ++R L+
Sbjct: 101 GPGDEVIVPSHTYIASWLAVSATGATPV--PVEPHEDHPTLDPLLVEKAITPRTRALL 156
>pdb|2OGA|A Chain A, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|B Chain B, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|C Chain C, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|D Chain D, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
Length = 399
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 176 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF-LLDPKVLESKLTEKSRLLI 232
PGDEVI+P+ +++ ATPV P E+ LDP ++E +T ++R L+
Sbjct: 101 GPGDEVIVPSHTYIASWLAVSATGATPV--PVEPHEDHPTLDPLLVEKAITPRTRALL 156
>pdb|3FEC|A Chain A, Crystal Structure Of Human Glutamate Carboxypeptidase Iii
(GcpiiiNAALADASE II), PSEUDO-Unliganded
pdb|3FED|A Chain A, The High Resolution Structure Of Human Glutamate
Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
WITH A TRANSITION STATE ANALOG OF Glu-Glu
pdb|3FEE|A Chain A, The High Resolution Structure Of Human Glutamate
Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
WITH QUISQUALIC ACID
pdb|3FF3|A Chain A, The High Resolution Structure Of Human Glutamate
Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
WITH L-Glutamate
Length = 707
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 326
Y HII+AP++H +A S PG+++ + + + RL + KH A I
Sbjct: 643 FYRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANS------RLAWKEVKKHISIAAFTI 696
Query: 327 QS 328
Q+
Sbjct: 697 QA 698
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 72/197 (36%), Gaps = 30/197 (15%)
Query: 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSY 152
GV R G+P V AEA I A ++ Y P AG + A EN ++
Sbjct: 34 GVGAYRDDNGKPYVLNCVRKAEAMI-AAKKMDKEYLPIAGLADFTRASAELALGENSEAF 92
Query: 153 TPDQILVSNG--------AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 204
+ + G + LQ +V +P P W ++ + R DA +
Sbjct: 93 KSGRYVTVQGISGTGSLRVGANFLQRFFKFSR---DVYLPKPSWGNHTPIFR--DAGLQL 147
Query: 205 LPTRISENFLLDPKVLE----------SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254
R DPK SK+ EKS +L+ NPTG + E+A
Sbjct: 148 QAYR-----YYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELAS 202
Query: 255 IVAKHPRLLVLSDEIYE 271
+V K LL D Y+
Sbjct: 203 VVKKR-NLLAYFDMAYQ 218
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 72/197 (36%), Gaps = 30/197 (15%)
Query: 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSY 152
GV R G+P V AEA I A ++ Y P AG + A EN ++
Sbjct: 34 GVGAYRDDNGKPYVLNCVRKAEAMI-AAKKMDKEYLPIAGLADFTRASAELALGENSEAF 92
Query: 153 TPDQILVSNG--------AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 204
+ + G + LQ +V +P P W ++ + R DA +
Sbjct: 93 KSGRYVTVQGISGTGSLRVGANFLQRFFKFSR---DVYLPKPSWGNHTPIFR--DAGLQL 147
Query: 205 LPTRISENFLLDPKVLE----------SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254
R DPK SK+ EKS +L+ NPTG + E+A
Sbjct: 148 QAYR-----YYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELAS 202
Query: 255 IVAKHPRLLVLSDEIYE 271
+V K LL D Y+
Sbjct: 203 VVKKR-NLLAYFDMAYQ 218
>pdb|3RBU|A Chain A, N-Terminally Avitev-Tagged Human Glutamate
Carboxypeptidase Ii In Complex With 2-Pmpa
Length = 739
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTV 296
Y H+IYAP++H +A S PG+++ +
Sbjct: 675 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 704
>pdb|2XEF|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Antibody-Recruiting Molecule Arm-P8
pdb|2XEG|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Antibody-Recruiting Molecule Arm-P4
pdb|2XEJ|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Arm-M4, Urea-Based Inhibitor
Length = 709
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTV 296
Y H+IYAP++H +A S PG+++ +
Sbjct: 645 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 674
>pdb|3BXM|A Chain A, Structure Of An Inactive Mutant Of Human Glutamate
Carboxypeptidase Ii [gcpii(E424a)] In Complex With
N-Acetyl-Asp-Glu (Naag)
pdb|3SJE|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(The E424a Inactive Mutant) In Complex With
N-Acetyl-Aspartyl-Aminononanoic Acid
pdb|3SJG|A Chain A, Human Glutamate Carboxypeptidase Ii (E424a Inactive Mutant
) In Complex With N-Acetyl-Aspartyl-Aminooctanoic Acid
pdb|3SJX|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(The E424a Inactive Mutant) In Complex With
N-Acetyl-Aspartyl-Methionine
Length = 709
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTV 296
Y H+IYAP++H +A S PG+++ +
Sbjct: 645 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 674
>pdb|2OOT|A Chain A, A High Resolution Structure Of Ligand-Free Human Glutamate
Carboxypeptidase Ii
pdb|2OR4|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii In Complex With Quisqualic Acid
pdb|2PVV|A Chain A, Structure Of Human Glutamate Carboxypeptidase Ii (Gcpii)
In Complex With L-Serine-O-Sulfate
pdb|2PVW|A Chain A, A High Resolution Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In Complex With
2-(Phosphonomethyl)pentanedioic Acid (2-Pmpa)
pdb|3BHX|A Chain A, X-ray Structure Of Human Glutamate Carboxypeptidase Ii
(gcpii) In Complex With A Transition State Analog Of
Asp-glu
pdb|3BI0|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(Gcpii) In Complex With A Transition State Analog Of
Glu-Glu
pdb|3BI1|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(Gcpii) In Complex With A Transition State Analog Of
Methotrexate-Glu
pdb|3D7D|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (gcpii) In A Complex With Dcfbd, A
Urea-based Inhibitor
pdb|3D7F|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In A Complex With Dcit, A
Urea-Based Inhibitor
pdb|3D7G|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In A Complex With Dcmc, A
Urea-Based Inhibitor
pdb|3D7H|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In A Complex With Dcibzl, A
Urea-Based Inhibitor
pdb|3IWW|A Chain A, Crystal Structure Of Human Glutamate Carboxypeptidase Ii
(Gcpii) In A Complex With Dbibzl, A Urea-Based Inhibitor
pdb|2XEI|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Antibody-Recruiting Molecule Arm-P2
pdb|3SJF|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii In
Complex With A Urea-Based Inhibitor (A25)
Length = 709
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTV 296
Y H+IYAP++H +A S PG+++ +
Sbjct: 645 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 674
>pdb|1Z8L|A Chain A, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
pdb|1Z8L|B Chain B, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
pdb|1Z8L|C Chain C, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
pdb|1Z8L|D Chain D, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
Length = 695
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTV 296
Y H+IYAP++H +A S PG+++ +
Sbjct: 631 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 660
>pdb|2C6C|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In
Complex With Gpi-18431
(S)-2-(4-Iodobenzylphosphonomethyl)- Pentanedioic Acid
pdb|2C6P|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In
Complex With Phosphate Anion
pdb|2JBJ|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In
Complex With 2-Pmpa (2-Phosphonomethyl-Pentanedioic
Acid)
pdb|2JBK|A Chain A, Membrane-bound Glutamate Carboxypeptidase Ii (gcpii) In
Complex With Quisqualic Acid (quisqualate,
Alpha-amino-3,5- Dioxo-1,2,4-oxadiazolidine-2-propanoic
Acid)
pdb|2C6G|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) With
Bound Glutamate
pdb|2CIJ|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) With
Bound Methionine
Length = 707
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 269 IYEHIIYAPATHTSFA--SLPGMWERTLTV 296
Y H+IYAP++H +A S PG+++ +
Sbjct: 643 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 672
>pdb|1B9I|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoic Acid (Ahba)
Synthase
Length = 388
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 159 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDP 217
V+NG L + PG EVI+PA ++S + A+ A V +P + + + LDP
Sbjct: 59 VTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGA--VTVPVDVDAATYNLDP 116
Query: 218 KVLESKLTEKSRLLI 232
+ + + +T ++++++
Sbjct: 117 EAVAAAVTPRTKVIM 131
>pdb|1B9H|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoic Acid (Ahba)
Synthase
Length = 388
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 159 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDP 217
V+NG L + PG EVI+PA ++S + A+ A V +P + + + LDP
Sbjct: 59 VTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGA--VTVPVDVDAATYNLDP 116
Query: 218 KVLESKLTEKSRLLI 232
+ + + +T ++++++
Sbjct: 117 EAVAAAVTPRTKVIM 131
>pdb|1MDO|A Chain A, Crystal Structure Of Arnb Aminotransferase With Pyridomine
5' Phosphate
Length = 393
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 178 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 232
GDEVI P+ WVS + A PV + + + P+ +E+ +T +++ +I
Sbjct: 79 GDEVITPSXTWVSTLNXIVLLGANPVXVDVD-RDTLXVTPEHIEAAITPQTKAII 132
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
From Sulfolobus Solfataricus
Length = 558
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKVGY-NIDAQW-----VDDFHHSIH 315
Query: 305 --MTGWRLGY 312
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(E283q) Complexed With Maltoheptaose
pdb|3VGH|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(E283q) Complexed With Maltotriosyltrehalose
Length = 558
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAQSDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 305 --MTGWRLGY 312
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(D252s)
pdb|3VGF|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(D252s) Complexed With Maltotriosyltrehalose
Length = 558
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 305 --MTGWRLGY 312
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase
(D252e)
Length = 558
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 305 --MTGWRLGY 312
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus
Glycosyltrehalose Trehalohydrolase
pdb|3VGB|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(Gthase) From Sulfolobus Solfataricus Km1
Length = 558
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 305 --MTGWRLGY 312
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|4APM|A Chain A, Crystal Structure Of Ama1 From Babesia Divergens
Length = 437
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 30/149 (20%)
Query: 112 IAEAGINA-----IREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166
IA+AG +A + + Y N G +C ++E TP+ +++ G+
Sbjct: 299 IAKAGTSAKNSKGVGMNWANYDSNTG-------LCRVIEE------TPNCLIIDAGS--- 342
Query: 167 ILQAVLAVCSPGDEVIIPAPF------WVSYPEMARIADATPVI-LPTRISENFLLDPKV 219
A+ AV SP ++ +P P ++ +R + TP+ + T +S L K
Sbjct: 343 --FAMTAVGSPLEQDAVPFPCDIVTNGYIEPRPRSRHRNTTPIFEVTTALSREALKCSKY 400
Query: 220 LESKLTEKSRLLILCSPSNPTGSVYPKNL 248
+ K +E CS P+ + +NL
Sbjct: 401 VHEKYSESCGTYYYCSEEKPSSWAFWRNL 429
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,092,006
Number of Sequences: 62578
Number of extensions: 515359
Number of successful extensions: 1454
Number of sequences better than 100.0: 129
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 143
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)