Query 012124
Match_columns 470
No_of_seqs 310 out of 2899
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 23:18:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012124.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012124hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1167 ARO8 Transcriptional r 100.0 5.5E-73 1.2E-77 567.6 38.6 425 9-465 14-457 (459)
2 PRK15481 transcriptional regul 100.0 3.3E-68 7.1E-73 535.0 34.1 409 8-462 14-430 (431)
3 COG0436 Aspartate/tyrosine/aro 100.0 2.1E-65 4.6E-70 501.8 46.5 358 94-464 28-392 (393)
4 PRK07366 succinyldiaminopimela 100.0 6.6E-59 1.4E-63 461.9 43.7 378 70-461 6-388 (388)
5 PRK07681 aspartate aminotransf 100.0 1.8E-58 3.9E-63 460.0 44.5 375 68-459 6-384 (399)
6 PLN00175 aminotransferase fami 100.0 5.7E-58 1.2E-62 456.6 44.8 374 67-462 32-412 (413)
7 PRK08636 aspartate aminotransf 100.0 2.5E-57 5.5E-62 452.1 45.0 382 71-465 10-402 (403)
8 PRK06207 aspartate aminotransf 100.0 1.9E-57 4.1E-62 452.4 43.6 359 93-465 38-404 (405)
9 PRK06348 aspartate aminotransf 100.0 3.3E-57 7.2E-62 448.6 44.7 352 93-460 28-382 (384)
10 PRK06855 aminotransferase; Val 100.0 1.4E-57 3.1E-62 456.5 41.7 379 81-464 19-430 (433)
11 PRK06107 aspartate aminotransf 100.0 7.5E-57 1.6E-61 448.6 46.5 396 67-465 6-402 (402)
12 PRK08068 transaminase; Reviewe 100.0 5.5E-57 1.2E-61 448.1 44.9 376 69-460 7-386 (389)
13 TIGR03540 DapC_direct LL-diami 100.0 8.1E-57 1.7E-61 446.4 45.6 371 73-459 8-382 (383)
14 PRK09276 LL-diaminopimelate am 100.0 7E-57 1.5E-61 447.2 44.7 376 68-459 5-384 (385)
15 PRK09147 succinyldiaminopimela 100.0 8.2E-57 1.8E-61 447.9 43.3 372 70-462 4-395 (396)
16 PRK05942 aspartate aminotransf 100.0 1.8E-56 3.8E-61 445.0 45.1 375 70-460 11-389 (394)
17 PRK08960 hypothetical protein; 100.0 2.3E-56 4.9E-61 443.4 44.6 377 68-462 6-386 (387)
18 PRK13355 bifunctional HTH-doma 100.0 1.3E-56 2.7E-61 459.2 43.8 388 66-465 118-516 (517)
19 PRK09148 aminotransferase; Val 100.0 3.6E-56 7.8E-61 443.6 45.7 381 71-464 7-391 (405)
20 PTZ00377 alanine aminotransfer 100.0 7.4E-57 1.6E-61 457.3 41.0 396 67-465 10-477 (481)
21 PLN02187 rooty/superroot1 100.0 6.5E-56 1.4E-60 446.2 44.2 365 92-466 64-441 (462)
22 PRK07682 hypothetical protein; 100.0 6.6E-56 1.4E-60 439.1 43.0 355 94-465 20-378 (378)
23 PLN00145 tyrosine/nicotianamin 100.0 1.3E-55 2.8E-60 441.3 44.4 363 93-466 51-427 (430)
24 PLN00143 tyrosine/nicotianamin 100.0 8.2E-56 1.8E-60 441.2 42.8 366 91-467 29-408 (409)
25 PRK08361 aspartate aminotransf 100.0 2.2E-55 4.8E-60 436.9 43.2 355 94-463 33-390 (391)
26 PLN02656 tyrosine transaminase 100.0 2.1E-55 4.5E-60 438.6 43.1 365 91-466 28-406 (409)
27 PRK07337 aminotransferase; Val 100.0 4.4E-55 9.4E-60 434.5 43.8 380 68-461 4-387 (388)
28 PRK06290 aspartate aminotransf 100.0 5.4E-55 1.2E-59 434.1 43.9 374 78-465 26-407 (410)
29 KOG0257 Kynurenine aminotransf 100.0 3.2E-56 6.9E-61 413.5 32.5 358 99-458 36-414 (420)
30 TIGR03538 DapC_gpp succinyldia 100.0 3.6E-55 7.8E-60 435.7 42.4 367 73-460 6-392 (393)
31 PTZ00433 tyrosine aminotransfe 100.0 4E-55 8.8E-60 437.2 42.8 364 91-465 30-410 (412)
32 PRK06108 aspartate aminotransf 100.0 1E-54 2.2E-59 431.7 44.6 355 93-462 23-381 (382)
33 PRK08912 hypothetical protein; 100.0 8.2E-55 1.8E-59 432.4 43.7 356 94-463 26-386 (387)
34 PRK07590 L,L-diaminopimelate a 100.0 5E-55 1.1E-59 436.5 42.3 360 79-460 17-408 (409)
35 PRK12414 putative aminotransfe 100.0 8.4E-55 1.8E-59 431.2 42.9 351 93-459 28-383 (384)
36 PRK05764 aspartate aminotransf 100.0 2.1E-54 4.5E-59 430.9 45.0 389 67-465 4-393 (393)
37 TIGR01264 tyr_amTase_E tyrosin 100.0 1.8E-54 3.8E-59 431.9 43.1 374 79-464 16-400 (401)
38 PRK07324 transaminase; Validat 100.0 2.9E-55 6.3E-60 432.3 36.6 349 91-464 23-371 (373)
39 PRK09082 methionine aminotrans 100.0 1.5E-54 3.3E-59 429.9 41.3 352 93-459 29-385 (386)
40 PRK05957 aspartate aminotransf 100.0 6.1E-54 1.3E-58 425.8 45.3 355 93-464 26-386 (389)
41 PRK07550 hypothetical protein; 100.0 4.9E-54 1.1E-58 426.7 44.5 377 68-460 3-384 (386)
42 PRK07683 aminotransferase A; V 100.0 7.3E-54 1.6E-58 424.9 45.1 354 92-463 26-383 (387)
43 PRK08363 alanine aminotransfer 100.0 1.2E-53 2.7E-58 425.3 44.7 369 79-463 15-394 (398)
44 PRK07309 aromatic amino acid a 100.0 1.5E-53 3.4E-58 423.2 44.7 355 94-465 30-390 (391)
45 PRK05839 hypothetical protein; 100.0 1E-53 2.2E-58 421.7 42.6 357 76-462 5-373 (374)
46 PRK08175 aminotransferase; Val 100.0 2.4E-53 5.2E-58 422.6 44.0 365 84-464 19-390 (395)
47 PRK07777 aminotransferase; Val 100.0 3.3E-53 7.2E-58 420.9 43.4 372 71-461 6-384 (387)
48 TIGR03537 DapC succinyldiamino 100.0 1.7E-53 3.6E-58 417.1 40.4 342 96-459 2-349 (350)
49 TIGR01265 tyr_nico_aTase tyros 100.0 4.3E-53 9.3E-58 421.7 43.9 376 78-464 15-402 (403)
50 PRK07568 aspartate aminotransf 100.0 7.3E-53 1.6E-57 420.4 45.3 379 68-465 4-394 (397)
51 PLN02450 1-aminocyclopropane-1 100.0 5.3E-54 1.2E-58 433.0 36.0 362 94-465 38-432 (468)
52 PRK09265 aminotransferase AlaT 100.0 1.2E-52 2.7E-57 418.8 43.8 384 70-465 9-403 (404)
53 PLN02231 alanine transaminase 100.0 4.7E-53 1E-57 429.4 38.3 366 94-465 129-529 (534)
54 PLN02376 1-aminocyclopropane-1 100.0 5.3E-53 1.1E-57 426.9 36.2 363 95-465 47-440 (496)
55 PLN02607 1-aminocyclopropane-1 100.0 2.4E-52 5.2E-57 417.7 35.6 364 93-466 46-440 (447)
56 TIGR03542 DAPAT_plant LL-diami 100.0 2.4E-51 5.3E-56 408.9 42.1 357 80-460 17-401 (402)
57 KOG0259 Tyrosine aminotransfer 100.0 5.1E-51 1.1E-55 371.8 38.7 360 94-464 61-434 (447)
58 PRK07865 N-succinyldiaminopime 100.0 1.3E-50 2.7E-55 399.1 42.5 338 87-458 20-363 (364)
59 PRK09275 aspartate aminotransf 100.0 1.7E-51 3.7E-56 411.9 35.2 357 95-465 101-519 (527)
60 TIGR03539 DapC_actino succinyl 100.0 2.9E-50 6.3E-55 395.1 41.7 348 76-457 3-356 (357)
61 PRK06836 aspartate aminotransf 100.0 1.3E-49 2.8E-54 395.5 45.3 346 93-465 32-393 (394)
62 PLN02368 alanine transaminase 100.0 2.1E-51 4.5E-56 405.6 31.9 328 67-396 11-396 (407)
63 PRK09257 aromatic amino acid a 100.0 3.2E-51 7E-56 407.5 33.3 362 72-460 6-395 (396)
64 PTZ00376 aspartate aminotransf 100.0 3.5E-51 7.5E-56 407.9 33.4 364 73-463 10-403 (404)
65 COG1168 MalY Bifunctional PLP- 100.0 5.3E-50 1.2E-54 368.4 37.6 355 94-464 25-387 (388)
66 PRK09440 avtA valine--pyruvate 100.0 7.6E-50 1.6E-54 400.6 39.2 352 94-466 30-414 (416)
67 PRK02610 histidinol-phosphate 100.0 1E-49 2.2E-54 393.6 36.7 336 95-465 29-373 (374)
68 TIGR03801 asp_4_decarbox aspar 100.0 2.9E-49 6.4E-54 395.3 36.2 358 95-465 95-518 (521)
69 PRK14809 histidinol-phosphate 100.0 4.8E-49 1E-53 386.8 36.3 335 86-462 22-356 (357)
70 PLN02672 methionine S-methyltr 100.0 5E-49 1.1E-53 416.0 38.7 362 92-462 695-1079(1082)
71 PF00155 Aminotran_1_2: Aminot 100.0 2.9E-50 6.4E-55 397.2 27.4 346 95-457 2-363 (363)
72 PRK06358 threonine-phosphate d 100.0 1.5E-48 3.3E-53 382.1 37.6 332 94-461 19-353 (354)
73 PRK01533 histidinol-phosphate 100.0 3.8E-49 8.3E-54 387.0 33.4 334 92-468 27-360 (366)
74 PLN02397 aspartate transaminas 100.0 1.4E-48 3.1E-53 390.0 34.4 363 71-462 27-420 (423)
75 PRK03158 histidinol-phosphate 100.0 3.9E-48 8.4E-53 381.0 32.7 330 94-460 29-358 (359)
76 PRK08637 hypothetical protein; 100.0 1.3E-47 2.9E-52 380.3 35.8 349 97-465 6-388 (388)
77 PRK07392 threonine-phosphate d 100.0 2.3E-47 5.1E-52 375.1 36.8 328 94-457 22-356 (360)
78 PRK06225 aspartate aminotransf 100.0 2.6E-46 5.6E-51 370.6 42.5 365 74-466 9-379 (380)
79 PRK05166 histidinol-phosphate 100.0 3.1E-47 6.7E-52 375.6 34.1 333 92-460 34-368 (371)
80 PRK08056 threonine-phosphate d 100.0 8.2E-47 1.8E-51 370.5 36.4 334 92-462 18-354 (356)
81 PRK03317 histidinol-phosphate 100.0 7.7E-47 1.7E-51 372.7 35.2 334 95-463 27-364 (368)
82 PLN03026 histidinol-phosphate 100.0 1.6E-46 3.5E-51 370.8 34.6 328 92-459 50-378 (380)
83 PRK05387 histidinol-phosphate 100.0 2.3E-46 5E-51 367.8 34.7 328 94-462 24-352 (353)
84 PRK08153 histidinol-phosphate 100.0 4E-46 8.6E-51 367.0 36.2 337 92-466 29-368 (369)
85 PRK02731 histidinol-phosphate 100.0 5.5E-46 1.2E-50 366.9 35.8 336 92-462 30-365 (367)
86 PRK09105 putative aminotransfe 100.0 2E-45 4.3E-50 361.5 35.2 325 94-461 43-368 (370)
87 PRK04870 histidinol-phosphate 100.0 3.6E-45 7.7E-50 359.4 33.7 327 93-460 25-355 (356)
88 KOG0634 Aromatic amino acid am 100.0 1.6E-45 3.5E-50 341.7 29.1 332 124-464 93-467 (472)
89 PRK14807 histidinol-phosphate 100.0 1.9E-44 4.2E-49 353.0 36.7 324 95-460 23-349 (351)
90 PRK07908 hypothetical protein; 100.0 3E-44 6.5E-49 351.8 36.5 324 93-462 21-346 (349)
91 PRK06425 histidinol-phosphate 100.0 7.8E-45 1.7E-49 352.9 31.8 313 95-461 17-331 (332)
92 COG0079 HisC Histidinol-phosph 100.0 3.7E-44 8.1E-49 345.4 34.3 330 95-463 23-354 (356)
93 PRK04781 histidinol-phosphate 100.0 2.7E-44 5.9E-49 353.1 33.9 324 96-460 33-360 (364)
94 TIGR01141 hisC histidinol-phos 100.0 6.4E-44 1.4E-48 349.5 32.1 326 94-457 19-345 (346)
95 PRK01688 histidinol-phosphate 100.0 2.4E-44 5.1E-49 352.0 28.7 320 95-457 29-350 (351)
96 KOG0256 1-aminocyclopropane-1- 100.0 7.2E-44 1.6E-48 327.9 29.5 333 124-465 114-463 (471)
97 PRK03321 putative aminotransfe 100.0 1.2E-43 2.6E-48 348.1 32.7 328 95-462 23-350 (352)
98 PRK14808 histidinol-phosphate 100.0 2.3E-43 5.1E-48 342.3 33.9 316 92-459 17-333 (335)
99 PRK00950 histidinol-phosphate 100.0 3.1E-43 6.8E-48 346.6 34.9 327 92-462 32-361 (361)
100 PRK04635 histidinol-phosphate 100.0 2.4E-43 5.1E-48 345.8 30.8 320 94-459 31-351 (354)
101 PRK05664 threonine-phosphate d 100.0 9.2E-43 2E-47 337.9 34.2 305 95-463 21-328 (330)
102 PRK06959 putative threonine-ph 100.0 9.7E-43 2.1E-47 338.3 33.0 312 95-466 25-336 (339)
103 PRK03967 histidinol-phosphate 100.0 4E-42 8.7E-47 334.4 33.2 317 94-464 18-335 (337)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.4E-42 5.2E-47 335.2 31.1 319 86-457 9-329 (330)
105 PRK08354 putative aminotransfe 100.0 1.9E-41 4.1E-46 326.2 34.2 298 95-456 9-308 (311)
106 cd00609 AAT_like Aspartate ami 100.0 3.1E-37 6.8E-42 302.7 40.3 345 97-458 1-349 (350)
107 PRK13238 tnaA tryptophanase/L- 100.0 6.6E-38 1.4E-42 313.4 34.3 368 70-462 12-432 (460)
108 COG3977 Alanine-alpha-ketoisov 100.0 5.9E-37 1.3E-41 271.1 32.7 349 95-464 31-412 (417)
109 KOG0258 Alanine aminotransfera 100.0 6E-35 1.3E-39 267.2 26.4 348 109-462 88-468 (475)
110 PRK06939 2-amino-3-ketobutyrat 100.0 2.7E-34 5.9E-39 286.9 33.8 335 92-464 40-394 (397)
111 TIGR01822 2am3keto_CoA 2-amino 100.0 2.2E-33 4.7E-38 279.8 34.9 333 92-465 36-391 (393)
112 TIGR03576 pyridox_MJ0158 pyrid 100.0 4.3E-33 9.3E-38 270.0 35.5 308 105-461 31-345 (346)
113 TIGR00858 bioF 8-amino-7-oxono 100.0 2.5E-33 5.4E-38 276.3 33.2 331 91-458 13-360 (360)
114 TIGR01825 gly_Cac_T_rel pyrido 100.0 8.2E-33 1.8E-37 275.0 34.7 337 92-465 31-383 (385)
115 PLN02822 serine palmitoyltrans 100.0 4.8E-33 1E-37 280.9 33.0 351 92-465 107-479 (481)
116 cd00617 Tnase_like Tryptophana 100.0 4.9E-33 1.1E-37 274.3 31.8 352 86-463 3-408 (431)
117 PRK05958 8-amino-7-oxononanoat 100.0 1.8E-31 3.9E-36 265.5 33.9 332 92-460 37-384 (385)
118 PRK02627 acetylornithine amino 100.0 1.1E-31 2.3E-36 268.0 31.6 338 92-464 37-395 (396)
119 COG1448 TyrB Aspartate/tyrosin 100.0 8.5E-32 1.8E-36 248.4 27.1 359 71-460 5-395 (396)
120 TIGR03392 FeS_syn_CsdA cystein 100.0 9.2E-31 2E-35 261.1 35.5 333 95-464 16-396 (398)
121 PRK10874 cysteine sulfinate de 100.0 6.6E-31 1.4E-35 262.4 34.2 333 95-464 19-399 (401)
122 PLN02721 threonine aldolase 100.0 6.6E-31 1.4E-35 258.3 31.1 328 96-463 7-352 (353)
123 PRK10534 L-threonine aldolase; 100.0 3.4E-31 7.4E-36 258.0 27.8 318 96-462 1-332 (333)
124 PLN02483 serine palmitoyltrans 100.0 1.2E-30 2.7E-35 263.9 30.8 333 93-464 99-467 (489)
125 PRK13392 5-aminolevulinate syn 100.0 3.7E-30 8.1E-35 257.4 31.8 332 93-464 45-398 (410)
126 PRK01278 argD acetylornithine 100.0 6.1E-30 1.3E-34 254.3 32.8 337 92-464 29-389 (389)
127 cd06454 KBL_like KBL_like; thi 100.0 1.1E-29 2.5E-34 249.1 33.3 330 95-460 2-348 (349)
128 TIGR00707 argD acetylornithine 100.0 6.5E-30 1.4E-34 253.6 31.2 333 92-461 25-379 (379)
129 PF12897 Aminotran_MocR: Alani 100.0 3.3E-30 7.2E-35 238.2 26.4 316 124-462 61-414 (425)
130 KOG0633 Histidinol phosphate a 100.0 1.7E-30 3.6E-35 225.9 22.5 331 91-459 38-373 (375)
131 PRK03244 argD acetylornithine 100.0 5.2E-30 1.1E-34 255.6 29.3 331 92-466 41-397 (398)
132 TIGR01979 sufS cysteine desulf 100.0 3.4E-29 7.3E-34 250.5 34.8 334 93-464 16-402 (403)
133 PLN02855 Bifunctional selenocy 100.0 3.1E-29 6.7E-34 251.9 33.3 335 94-465 31-420 (424)
134 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.1E-29 4.5E-34 248.4 30.4 297 134-464 54-369 (370)
135 PRK09295 bifunctional cysteine 100.0 7.6E-29 1.6E-33 247.8 34.5 330 95-462 23-403 (406)
136 cd06451 AGAT_like Alanine-glyo 100.0 5.5E-29 1.2E-33 244.8 32.1 320 108-462 10-356 (356)
137 PRK07179 hypothetical protein; 100.0 2.3E-28 5.1E-33 244.2 34.3 333 92-465 52-400 (407)
138 cd06502 TA_like Low-specificit 100.0 5.6E-29 1.2E-33 243.1 28.8 321 98-459 1-337 (338)
139 cd00378 SHMT Serine-glycine hy 100.0 1.3E-28 2.8E-33 246.1 32.0 338 94-464 19-386 (402)
140 TIGR01821 5aminolev_synth 5-am 100.0 3.3E-28 7.2E-33 242.8 34.1 334 93-465 44-398 (402)
141 PRK08088 4-aminobutyrate amino 100.0 1E-28 2.3E-33 247.3 30.1 356 91-465 38-425 (425)
142 PRK09064 5-aminolevulinate syn 100.0 5E-28 1.1E-32 242.1 34.3 333 93-465 45-399 (407)
143 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 4.2E-28 9.2E-33 238.7 32.2 325 105-461 10-360 (361)
144 PRK02948 cysteine desulfurase; 100.0 2.3E-28 5E-33 242.5 28.9 336 98-469 3-380 (381)
145 PLN02409 serine--glyoxylate am 100.0 7.2E-28 1.6E-32 239.6 32.2 325 108-465 20-374 (401)
146 TIGR01976 am_tr_V_VC1184 cyste 100.0 8.6E-28 1.9E-32 239.9 32.9 329 96-457 18-397 (397)
147 cd00610 OAT_like Acetyl ornith 100.0 3E-28 6.4E-33 244.6 28.8 347 92-461 34-413 (413)
148 cd00613 GDC-P Glycine cleavage 100.0 8.1E-28 1.7E-32 240.2 31.5 329 94-457 20-398 (398)
149 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 3.2E-27 6.9E-32 232.3 32.0 319 107-460 9-354 (355)
150 TIGR03403 nifS_epsilon cystein 100.0 1.4E-27 3E-32 236.9 29.1 323 108-465 11-377 (382)
151 TIGR02326 transamin_PhnW 2-ami 100.0 2.7E-27 5.8E-32 233.3 30.9 302 133-462 33-361 (363)
152 PRK02936 argD acetylornithine 100.0 3E-27 6.5E-32 234.1 31.2 333 92-461 27-377 (377)
153 PRK05093 argD bifunctional N-s 100.0 3.4E-27 7.4E-32 235.3 31.3 332 92-464 38-401 (403)
154 TIGR00713 hemL glutamate-1-sem 100.0 1.8E-27 3.9E-32 239.0 29.0 347 92-464 46-423 (423)
155 PRK13393 5-aminolevulinate syn 100.0 1.7E-26 3.8E-31 230.6 35.9 336 93-464 44-397 (406)
156 cd06453 SufS_like Cysteine des 100.0 4E-27 8.7E-32 233.1 29.7 314 108-457 11-373 (373)
157 PRK00451 glycine dehydrogenase 100.0 8.5E-27 1.8E-31 235.9 32.1 341 81-461 51-446 (447)
158 PRK13479 2-aminoethylphosphona 100.0 1.1E-26 2.4E-31 229.4 31.5 302 135-465 37-365 (368)
159 cd06450 DOPA_deC_like DOPA dec 100.0 1.9E-27 4.2E-32 232.9 25.1 309 109-459 12-344 (345)
160 PRK07049 methionine gamma-lyas 100.0 3.9E-26 8.5E-31 227.2 33.1 224 125-380 78-314 (427)
161 TIGR01977 am_tr_V_EF2568 cyste 100.0 2E-26 4.4E-31 228.4 30.2 327 99-459 3-375 (376)
162 PRK04073 rocD ornithine--oxo-a 100.0 2E-26 4.4E-31 229.2 30.0 327 92-461 38-395 (396)
163 TIGR03402 FeS_nifS cysteine de 100.0 3.7E-26 8.1E-31 226.5 31.6 321 108-465 11-374 (379)
164 PLN03227 serine palmitoyltrans 100.0 4.6E-26 9.9E-31 225.3 31.3 339 98-464 2-383 (392)
165 COG0520 csdA Selenocysteine ly 100.0 2.4E-25 5.2E-30 218.4 35.9 331 93-462 20-404 (405)
166 PRK04260 acetylornithine amino 100.0 8.4E-26 1.8E-30 223.4 31.2 332 92-460 27-374 (375)
167 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.9E-25 4E-30 221.5 33.0 327 107-465 31-383 (387)
168 PRK08247 cystathionine gamma-s 100.0 1.6E-25 3.4E-30 219.8 30.4 284 130-463 51-364 (366)
169 PRK13520 L-tyrosine decarboxyl 99.9 8.4E-25 1.8E-29 216.4 35.2 323 108-462 32-370 (371)
170 PLN02242 methionine gamma-lyas 99.9 1.5E-25 3.2E-30 222.3 29.3 219 130-383 75-302 (418)
171 PLN00144 acetylornithine trans 99.9 2.2E-25 4.7E-30 219.7 30.0 336 92-464 13-381 (382)
172 PRK12381 bifunctional succinyl 99.9 2.5E-25 5.4E-30 221.7 30.0 341 92-466 37-402 (406)
173 TIGR01437 selA_rel uncharacter 99.9 3E-25 6.5E-30 217.4 29.9 305 108-460 25-362 (363)
174 PRK14012 cysteine desulfurase; 99.9 3E-25 6.5E-30 221.6 29.8 326 97-465 5-381 (404)
175 PRK00854 rocD ornithine--oxo-a 99.9 4.2E-25 9.1E-30 220.5 29.8 328 92-462 39-400 (401)
176 PTZ00125 ornithine aminotransf 99.9 8.9E-25 1.9E-29 218.3 31.3 340 92-465 29-397 (400)
177 TIGR02006 IscS cysteine desulf 99.9 8.2E-25 1.8E-29 218.2 30.5 328 97-465 5-379 (402)
178 PRK00011 glyA serine hydroxyme 99.9 4.3E-24 9.3E-29 214.3 33.8 336 94-463 25-389 (416)
179 PRK06234 methionine gamma-lyas 99.9 2.4E-24 5.1E-29 213.5 29.7 220 127-380 58-287 (400)
180 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.3E-23 5E-28 206.3 34.3 318 109-459 33-372 (373)
181 PRK09792 4-aminobutyrate trans 99.9 1.2E-23 2.7E-28 209.7 31.9 351 92-462 38-420 (421)
182 COG0156 BioF 7-keto-8-aminopel 99.9 2.9E-23 6.3E-28 199.7 33.0 332 93-460 38-387 (388)
183 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.2E-23 4.8E-28 204.7 32.6 306 109-461 10-375 (376)
184 PRK07505 hypothetical protein; 99.9 2.5E-23 5.4E-28 207.6 33.3 334 92-463 44-399 (402)
185 TIGR00700 GABAtrnsam 4-aminobu 99.9 6.7E-24 1.4E-28 212.1 28.5 350 92-462 31-419 (420)
186 TIGR03246 arg_catab_astC succi 99.9 5.7E-23 1.2E-27 204.2 32.9 333 92-464 33-396 (397)
187 PRK06918 4-aminobutyrate amino 99.9 5E-23 1.1E-27 207.4 32.9 354 92-465 52-445 (451)
188 PRK08133 O-succinylhomoserine 99.9 6E-23 1.3E-27 202.8 31.5 214 133-381 63-281 (390)
189 PRK06460 hypothetical protein; 99.9 7.1E-23 1.5E-27 201.3 31.6 217 129-380 43-264 (376)
190 PRK06767 methionine gamma-lyas 99.9 3.7E-23 8E-28 204.3 29.5 285 129-462 59-384 (386)
191 PRK08249 cystathionine gamma-s 99.9 7.2E-23 1.6E-27 202.2 30.9 217 129-380 62-283 (398)
192 PRK08045 cystathionine gamma-s 99.9 1.5E-22 3.3E-27 199.1 32.7 220 125-380 47-272 (386)
193 TIGR02080 O_succ_thio_ly O-suc 99.9 1.2E-22 2.7E-27 199.7 31.8 221 124-380 45-271 (382)
194 TIGR03235 DNA_S_dndA cysteine 99.9 1.1E-23 2.5E-28 206.7 24.3 307 107-453 9-348 (353)
195 PRK08776 cystathionine gamma-s 99.9 2.7E-22 5.9E-27 198.4 33.3 213 133-380 62-280 (405)
196 PRK00062 glutamate-1-semialdeh 99.9 3.7E-23 7.9E-28 207.0 27.4 350 92-464 48-425 (426)
197 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2.3E-22 5E-27 198.4 32.5 311 110-461 11-374 (375)
198 PLN02955 8-amino-7-oxononanoat 99.9 3.8E-22 8.2E-27 196.4 33.3 324 94-463 102-461 (476)
199 PRK04366 glycine dehydrogenase 99.9 3.1E-22 6.7E-27 202.8 33.2 360 80-466 52-451 (481)
200 PLN02651 cysteine desulfurase 99.9 7.1E-23 1.5E-27 201.7 27.8 308 107-451 10-364 (364)
201 cd00614 CGS_like CGS_like: Cys 99.9 2.3E-22 5E-27 197.8 30.0 217 129-380 38-260 (369)
202 COG1104 NifS Cysteine sulfinat 99.9 1.7E-22 3.7E-27 190.8 27.0 324 108-469 13-383 (386)
203 PRK07503 methionine gamma-lyas 99.9 5.5E-22 1.2E-26 196.6 31.7 216 130-380 64-286 (403)
204 PRK07504 O-succinylhomoserine 99.9 4.9E-22 1.1E-26 196.7 31.2 217 129-380 63-285 (398)
205 PRK08861 cystathionine gamma-s 99.9 7.2E-22 1.6E-26 193.7 31.5 217 129-380 51-273 (388)
206 PRK06777 4-aminobutyrate amino 99.9 7.9E-22 1.7E-26 196.8 31.5 349 92-462 38-420 (421)
207 PRK04612 argD acetylornithine 99.9 1.2E-21 2.6E-26 194.2 32.3 340 92-464 38-404 (408)
208 PRK07811 cystathionine gamma-s 99.9 1.2E-21 2.6E-26 193.4 32.1 217 129-380 59-281 (388)
209 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.7E-21 3.8E-26 192.2 32.8 312 109-461 13-377 (379)
210 TIGR01328 met_gam_lyase methio 99.9 1.2E-21 2.7E-26 193.3 31.7 215 131-380 59-280 (391)
211 PRK07582 cystathionine gamma-l 99.9 1E-21 2.2E-26 192.6 30.2 216 125-380 46-267 (366)
212 PLN02624 ornithine-delta-amino 99.9 1.1E-21 2.3E-26 198.3 30.7 336 92-464 73-445 (474)
213 PRK09028 cystathionine beta-ly 99.9 4E-21 8.6E-26 188.2 33.3 241 104-380 33-280 (394)
214 KOG1412 Aspartate aminotransfe 99.9 8E-22 1.7E-26 176.1 25.2 370 73-467 8-409 (410)
215 PRK08360 4-aminobutyrate amino 99.9 5.2E-21 1.1E-25 191.5 34.0 355 92-466 39-429 (443)
216 PRK05937 8-amino-7-oxononanoat 99.9 4.9E-21 1.1E-25 188.8 33.3 329 95-467 5-354 (370)
217 PRK07495 4-aminobutyrate amino 99.9 3.5E-21 7.5E-26 191.9 31.9 351 92-466 38-424 (425)
218 cd00616 AHBA_syn 3-amino-5-hyd 99.9 4.6E-21 1E-25 188.3 32.2 299 114-458 3-352 (352)
219 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.2E-21 1.1E-25 188.6 32.5 216 131-381 54-274 (380)
220 TIGR01885 Orn_aminotrans ornit 99.9 2.1E-21 4.5E-26 193.7 29.9 332 92-461 35-400 (401)
221 PRK07810 O-succinylhomoserine 99.9 1.5E-21 3.2E-26 193.3 28.3 217 130-381 69-291 (403)
222 PRK08574 cystathionine gamma-s 99.9 6.9E-21 1.5E-25 187.5 32.4 215 130-380 52-272 (385)
223 PF00266 Aminotran_5: Aminotra 99.9 3E-21 6.6E-26 190.8 29.0 314 107-453 10-371 (371)
224 PRK07050 cystathionine beta-ly 99.9 3.4E-21 7.4E-26 190.3 29.0 215 131-380 65-285 (394)
225 TIGR02407 ectoine_ectB diamino 99.9 7.2E-21 1.6E-25 189.4 31.5 344 92-463 33-412 (412)
226 PRK07269 cystathionine gamma-s 99.9 2.7E-21 5.9E-26 188.7 27.4 284 129-461 52-362 (364)
227 COG4992 ArgD Ornithine/acetylo 99.9 5E-21 1.1E-25 180.5 27.7 332 91-466 39-401 (404)
228 PRK05968 hypothetical protein; 99.9 9E-21 2E-25 187.2 29.7 281 133-464 65-387 (389)
229 TIGR01329 cysta_beta_ly_E cyst 99.9 3.5E-20 7.6E-25 182.4 31.2 290 125-463 39-375 (378)
230 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.5E-20 2.1E-24 180.5 33.8 310 109-461 9-380 (380)
231 PRK09264 diaminobutyrate--2-ox 99.9 4.3E-20 9.3E-25 184.8 31.4 347 92-465 37-418 (425)
232 PRK08117 4-aminobutyrate amino 99.9 5E-20 1.1E-24 185.1 31.8 351 92-465 41-431 (433)
233 PRK08064 cystathionine beta-ly 99.9 7.6E-20 1.6E-24 180.8 31.7 211 133-379 56-272 (390)
234 PRK06058 4-aminobutyrate amino 99.9 8.6E-20 1.9E-24 183.4 32.5 351 92-464 54-443 (443)
235 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 5.3E-20 1.2E-24 183.5 29.8 159 131-317 57-219 (418)
236 TIGR01324 cysta_beta_ly_B cyst 99.9 8E-20 1.7E-24 179.1 30.3 220 125-380 42-269 (377)
237 PRK08248 O-acetylhomoserine am 99.9 9.1E-20 2E-24 181.5 30.8 155 133-315 66-224 (431)
238 TIGR01814 kynureninase kynuren 99.9 1.2E-19 2.5E-24 181.5 31.6 325 94-461 26-405 (406)
239 PRK05967 cystathionine beta-ly 99.9 2.3E-19 5E-24 175.4 30.8 219 131-380 60-283 (395)
240 KOG1411 Aspartate aminotransfe 99.9 3.7E-21 7.9E-26 174.3 16.5 365 70-461 30-423 (427)
241 PLN02509 cystathionine beta-ly 99.9 1.9E-19 4.1E-24 179.5 30.4 223 124-380 124-352 (464)
242 PRK06702 O-acetylhomoserine am 99.9 3.1E-19 6.6E-24 176.4 30.9 216 132-381 62-314 (432)
243 PRK06084 O-acetylhomoserine am 99.9 3.3E-19 7.2E-24 177.4 30.8 157 132-316 59-219 (425)
244 PRK05964 adenosylmethionine--8 99.9 3.4E-19 7.4E-24 178.5 30.9 346 92-464 40-423 (423)
245 PRK07671 cystathionine beta-ly 99.9 1.1E-18 2.4E-23 171.6 31.2 213 132-380 51-269 (377)
246 PRK15407 lipopolysaccharide bi 99.9 5.7E-18 1.2E-22 169.2 36.3 321 97-462 26-435 (438)
247 COG0075 Serine-pyruvate aminot 99.9 2.2E-18 4.8E-23 164.4 31.0 325 108-468 16-368 (383)
248 COG0001 HemL Glutamate-1-semia 99.9 7.4E-19 1.6E-23 167.7 27.7 347 92-466 51-431 (432)
249 PRK06176 cystathionine gamma-s 99.8 1.1E-18 2.4E-23 171.6 29.6 212 133-380 52-269 (380)
250 cd00615 Orn_deC_like Ornithine 99.8 4.4E-20 9.5E-25 176.1 18.5 168 129-314 57-231 (294)
251 PRK05939 hypothetical protein; 99.8 9.5E-19 2.1E-23 172.7 28.4 157 132-316 45-207 (397)
252 PRK13580 serine hydroxymethylt 99.8 3.8E-18 8.3E-23 168.3 31.9 341 94-464 49-446 (493)
253 TIGR00709 dat 2,4-diaminobutyr 99.8 4.7E-18 1E-22 170.7 32.2 358 92-467 37-439 (442)
254 PRK03715 argD acetylornithine 99.8 4.2E-18 9.2E-23 168.5 31.3 334 92-464 34-394 (395)
255 PRK08593 4-aminobutyrate amino 99.8 7.5E-18 1.6E-22 169.0 32.4 354 92-466 40-432 (445)
256 TIGR02618 tyr_phenol_ly tyrosi 99.8 8.9E-18 1.9E-22 163.3 30.2 354 84-463 19-426 (450)
257 PTZ00094 serine hydroxymethylt 99.8 9.6E-18 2.1E-22 169.3 31.5 337 94-463 34-408 (452)
258 TIGR03531 selenium_SpcS O-phos 99.8 5.4E-18 1.2E-22 167.3 28.5 304 133-461 103-444 (444)
259 PRK13034 serine hydroxymethylt 99.8 1.5E-17 3.2E-22 165.9 32.1 335 94-463 28-392 (416)
260 TIGR03372 putres_am_tran putre 99.8 1.3E-17 2.9E-22 166.1 31.1 335 92-461 73-442 (442)
261 PRK06541 hypothetical protein; 99.8 1.2E-17 2.6E-22 168.0 31.0 355 92-465 50-457 (460)
262 COG2008 GLY1 Threonine aldolas 99.8 1.1E-17 2.4E-22 155.0 26.1 324 97-461 2-341 (342)
263 TIGR01364 serC_1 phosphoserine 99.8 2.4E-17 5.1E-22 160.3 29.9 315 108-463 3-348 (349)
264 PRK11522 putrescine--2-oxoglut 99.8 2.9E-17 6.3E-22 164.8 31.3 345 92-466 80-454 (459)
265 PRK05994 O-acetylhomoserine am 99.8 2.8E-17 6E-22 164.1 30.8 155 133-315 65-223 (427)
266 PRK08134 O-acetylhomoserine am 99.8 1.8E-17 3.9E-22 165.1 29.1 155 133-315 66-224 (433)
267 COG0399 WecE Predicted pyridox 99.8 1.5E-16 3.3E-21 152.2 33.9 309 109-463 14-373 (374)
268 KOG1549 Cysteine desulfurase N 99.8 1.7E-17 3.6E-22 157.7 26.7 202 93-317 41-257 (428)
269 COG0160 GabT 4-aminobutyrate a 99.8 4.3E-17 9.3E-22 158.8 30.1 348 92-464 54-446 (447)
270 PRK07046 aminotransferase; Val 99.8 6.3E-17 1.4E-21 162.3 31.8 340 92-465 73-452 (453)
271 PLN02482 glutamate-1-semialdeh 99.8 4.8E-17 1E-21 163.4 30.1 340 91-463 96-473 (474)
272 PRK04013 argD acetylornithine/ 99.8 2.3E-17 5E-22 160.6 26.6 320 92-465 22-362 (364)
273 PRK07482 hypothetical protein; 99.8 1.1E-16 2.3E-21 161.3 32.2 356 92-464 48-455 (461)
274 KOG1368 Threonine aldolase [Am 99.8 4.3E-17 9.3E-22 145.3 25.5 330 96-464 23-370 (384)
275 PRK07812 O-acetylhomoserine am 99.8 4.3E-17 9.4E-22 162.1 28.7 213 134-380 72-320 (436)
276 KOG1359 Glycine C-acetyltransf 99.8 2.2E-17 4.7E-22 146.9 23.0 373 40-465 27-414 (417)
277 PRK03080 phosphoserine aminotr 99.8 4.8E-17 1E-21 160.6 28.0 316 108-467 23-377 (378)
278 PRK12389 glutamate-1-semialdeh 99.8 1.5E-16 3.3E-21 159.2 31.9 346 91-463 50-427 (428)
279 PRK07678 aminotransferase; Val 99.8 1.3E-16 2.8E-21 160.4 31.4 355 92-465 45-451 (451)
280 PLN02724 Molybdenum cofactor s 99.8 5.8E-17 1.3E-21 173.9 30.7 340 96-462 35-487 (805)
281 cd00611 PSAT_like Phosphoserin 99.8 3.1E-17 6.6E-22 160.7 26.1 314 107-460 9-353 (355)
282 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.8E-16 3.8E-21 154.7 31.0 216 135-381 55-278 (386)
283 PRK05965 hypothetical protein; 99.8 1.4E-16 3E-21 160.4 31.2 354 92-468 44-452 (459)
284 TIGR01788 Glu-decarb-GAD gluta 99.8 1.1E-16 2.5E-21 158.7 29.7 338 109-464 54-430 (431)
285 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.8E-16 4E-21 155.8 30.7 305 110-458 5-363 (363)
286 PLN02760 4-aminobutyrate:pyruv 99.8 2.1E-16 4.6E-21 160.1 31.7 354 91-464 86-492 (504)
287 PRK05769 4-aminobutyrate amino 99.8 2.9E-16 6.2E-21 157.5 32.4 347 92-464 52-440 (441)
288 PRK00615 glutamate-1-semialdeh 99.8 1E-16 2.2E-21 159.7 28.2 351 91-465 50-430 (433)
289 PLN02414 glycine dehydrogenase 99.8 1.1E-16 2.3E-21 170.8 28.9 308 131-465 564-909 (993)
290 PRK08114 cystathionine beta-ly 99.8 4.9E-16 1.1E-20 151.9 31.3 201 154-380 77-283 (395)
291 PRK05355 3-phosphoserine/phosp 99.8 2.1E-16 4.5E-21 154.5 28.2 317 107-463 13-358 (360)
292 PRK02769 histidine decarboxyla 99.8 1.8E-15 3.9E-20 148.2 34.8 290 132-462 62-371 (380)
293 PF04864 Alliinase_C: Allinase 99.8 9.2E-18 2E-22 154.1 17.1 289 133-460 45-362 (363)
294 PRK06917 hypothetical protein; 99.8 9.3E-16 2E-20 153.9 33.1 355 92-464 29-438 (447)
295 PRK05639 4-aminobutyrate amino 99.8 8.9E-16 1.9E-20 154.2 32.8 348 92-465 51-445 (457)
296 PRK07481 hypothetical protein; 99.8 7.5E-16 1.6E-20 154.8 32.2 352 92-465 40-447 (449)
297 PRK06105 aminotransferase; Pro 99.8 6E-16 1.3E-20 155.9 31.5 351 92-465 46-451 (460)
298 PRK06943 adenosylmethionine--8 99.8 5.8E-16 1.3E-20 155.5 31.1 345 92-465 52-448 (453)
299 KOG1360 5-aminolevulinate synt 99.8 2.4E-16 5.1E-21 145.8 25.5 324 106-465 184-526 (570)
300 PRK06062 hypothetical protein; 99.8 6.3E-16 1.4E-20 155.3 31.1 350 92-465 51-447 (451)
301 PRK13237 tyrosine phenol-lyase 99.8 1E-15 2.2E-20 149.4 31.3 355 84-463 26-433 (460)
302 PRK13360 omega amino acid--pyr 99.8 7.8E-16 1.7E-20 154.2 31.4 344 92-464 44-441 (442)
303 cd01494 AAT_I Aspartate aminot 99.8 1.5E-17 3.3E-22 145.2 16.8 165 134-315 3-169 (170)
304 PRK07986 adenosylmethionine--8 99.8 8.3E-16 1.8E-20 153.1 30.5 338 92-463 41-423 (428)
305 PRK06938 diaminobutyrate--2-ox 99.8 1.3E-15 2.9E-20 153.2 31.8 356 91-465 60-462 (464)
306 PRK06173 adenosylmethionine--8 99.8 6.8E-16 1.5E-20 153.9 29.3 340 92-464 42-426 (429)
307 PRK07480 putative aminotransfe 99.8 8.5E-16 1.8E-20 154.4 30.2 354 92-465 48-450 (456)
308 PLN03226 serine hydroxymethylt 99.8 1.5E-15 3.2E-20 152.8 31.9 336 95-463 35-419 (475)
309 PRK09221 beta alanine--pyruvat 99.8 1.3E-15 2.8E-20 152.8 31.1 345 92-464 47-444 (445)
310 PRK12403 putative aminotransfe 99.8 1.9E-15 4.1E-20 152.2 32.1 353 92-465 52-454 (460)
311 PRK05630 adenosylmethionine--8 99.8 1.6E-15 3.6E-20 151.0 30.5 338 92-463 38-420 (422)
312 PRK06082 4-aminobutyrate amino 99.7 2.6E-15 5.6E-20 151.1 31.4 348 92-465 70-453 (459)
313 PRK07036 hypothetical protein; 99.7 3E-15 6.5E-20 150.9 31.6 350 92-464 49-453 (466)
314 PRK07483 hypothetical protein; 99.7 2.9E-15 6.4E-20 150.1 30.4 359 92-466 28-440 (443)
315 PRK05613 O-acetylhomoserine am 99.7 4.5E-15 9.7E-20 147.8 31.0 213 134-380 72-325 (437)
316 PRK04311 selenocysteine syntha 99.7 1.2E-14 2.5E-19 145.3 34.0 318 108-462 98-463 (464)
317 PLN02271 serine hydroxymethylt 99.7 5.7E-15 1.2E-19 146.4 31.2 337 95-462 149-539 (586)
318 PRK07030 adenosylmethionine--8 99.7 4.9E-15 1.1E-19 149.2 31.1 349 92-464 45-447 (466)
319 PLN03032 serine decarboxylase; 99.7 1.4E-15 3E-20 147.9 25.5 288 132-459 63-372 (374)
320 PRK06916 adenosylmethionine--8 99.7 5.9E-15 1.3E-19 148.7 30.8 350 92-465 54-457 (460)
321 TIGR00508 bioA adenosylmethion 99.7 4.3E-15 9.3E-20 148.5 29.3 337 92-463 43-426 (427)
322 COG0626 MetC Cystathionine bet 99.7 8.8E-15 1.9E-19 141.0 30.1 212 134-380 66-285 (396)
323 PRK06434 cystathionine gamma-l 99.7 5.3E-15 1.1E-19 144.8 29.0 210 133-380 66-281 (384)
324 PRK08742 adenosylmethionine--8 99.7 7.5E-15 1.6E-19 147.8 30.8 355 92-465 62-469 (472)
325 PRK06931 diaminobutyrate--2-ox 99.7 9.2E-15 2E-19 147.1 30.0 358 92-465 56-456 (459)
326 PRK06148 hypothetical protein; 99.7 1.2E-14 2.6E-19 159.0 32.9 348 92-464 622-1011(1013)
327 KOG0053 Cystathionine beta-lya 99.7 9.1E-15 2E-19 139.0 27.3 183 135-341 77-265 (409)
328 PLN02880 tyrosine decarboxylas 99.7 1E-14 2.3E-19 147.5 28.2 341 110-465 97-486 (490)
329 COG1103 Archaea-specific pyrid 99.7 4.9E-14 1.1E-18 124.4 27.8 299 133-464 63-381 (382)
330 PRK08297 L-lysine aminotransfe 99.7 2E-14 4.3E-19 144.2 29.2 342 92-464 43-442 (443)
331 PRK06149 hypothetical protein; 99.7 4.4E-14 9.4E-19 154.6 33.2 349 92-463 583-970 (972)
332 TIGR01366 serC_3 phosphoserine 99.7 1.3E-14 2.9E-19 142.0 26.1 314 108-464 14-361 (361)
333 PRK06209 glutamate-1-semialdeh 99.7 6E-15 1.3E-19 147.8 23.7 331 92-464 46-406 (431)
334 PLN02590 probable tyrosine dec 99.7 4.5E-14 9.7E-19 142.9 30.0 343 110-467 145-536 (539)
335 TIGR00474 selA seryl-tRNA(sec) 99.7 2E-13 4.4E-18 136.1 32.6 312 108-457 93-453 (454)
336 PF00464 SHMT: Serine hydroxym 99.7 1.9E-14 4.1E-19 139.3 24.0 327 96-455 22-397 (399)
337 KOG2862 Alanine-glyoxylate ami 99.7 2.2E-13 4.7E-18 122.7 28.2 319 115-463 31-382 (385)
338 COG0112 GlyA Glycine/serine hy 99.7 3.6E-13 7.9E-18 125.9 30.0 336 95-463 27-390 (413)
339 TIGR00699 GABAtrns_euk 4-amino 99.7 6.8E-14 1.5E-18 139.8 26.3 339 92-461 56-464 (464)
340 TIGR03251 LAT_fam L-lysine 6-t 99.6 1.9E-13 4.1E-18 137.0 27.8 339 92-459 36-430 (431)
341 PRK05367 glycine dehydrogenase 99.6 4.9E-13 1.1E-17 143.8 31.6 305 131-465 538-877 (954)
342 PRK12566 glycine dehydrogenase 99.6 7.9E-13 1.7E-17 138.9 31.7 313 125-464 530-877 (954)
343 COG2873 MET17 O-acetylhomoseri 99.6 3.5E-13 7.6E-18 124.6 24.8 155 133-315 64-222 (426)
344 KOG1401 Acetylornithine aminot 99.6 4.2E-13 9.2E-18 125.6 24.9 343 92-465 54-432 (433)
345 PRK13578 ornithine decarboxyla 99.6 8.9E-13 1.9E-17 136.0 27.9 176 127-317 169-370 (720)
346 COG0076 GadB Glutamate decarbo 99.6 8.5E-13 1.8E-17 131.5 26.8 280 108-397 74-381 (460)
347 TIGR00461 gcvP glycine dehydro 99.6 3.3E-12 7.2E-17 135.1 32.5 314 124-465 516-869 (939)
348 PLN02263 serine decarboxylase 99.6 1.2E-11 2.5E-16 122.4 34.2 294 132-463 130-443 (470)
349 TIGR01365 serC_2 phosphoserine 99.6 6.1E-13 1.3E-17 129.5 24.4 314 112-462 19-372 (374)
350 PRK15029 arginine decarboxylas 99.6 3.6E-12 7.9E-17 132.9 30.9 172 129-315 202-399 (755)
351 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 5.1E-14 1.1E-18 136.9 16.0 222 153-385 81-328 (417)
352 PF01212 Beta_elim_lyase: Beta 99.6 5.7E-15 1.2E-19 138.8 8.2 245 108-378 7-271 (290)
353 COG1725 Predicted transcriptio 99.6 1.4E-16 3E-21 126.5 -2.3 54 10-64 22-78 (125)
354 KOG1357 Serine palmitoyltransf 99.6 3.1E-13 6.7E-18 127.6 19.0 297 131-461 178-500 (519)
355 TIGR03799 NOD_PanD_pyr putativ 99.6 4.7E-12 1E-16 128.5 28.7 328 116-456 110-518 (522)
356 TIGR02617 tnaA_trp_ase tryptop 99.6 8.7E-12 1.9E-16 120.6 28.9 333 96-463 43-441 (467)
357 PLN02452 phosphoserine transam 99.5 1.1E-11 2.4E-16 120.7 29.4 326 96-463 8-363 (365)
358 KOG1404 Alanine-glyoxylate ami 99.5 4.7E-12 1E-16 117.8 25.2 342 91-457 47-432 (442)
359 PLN02974 adenosylmethionine-8- 99.5 1.3E-11 2.8E-16 130.8 30.9 347 95-461 366-816 (817)
360 COG0161 BioA Adenosylmethionin 99.5 1.2E-11 2.7E-16 120.1 27.8 354 92-465 42-445 (449)
361 COG3844 Kynureninase [Amino ac 99.5 1.3E-11 2.8E-16 112.2 25.7 331 91-464 27-403 (407)
362 PRK15400 lysine decarboxylase 99.5 7.2E-12 1.6E-16 129.3 26.9 169 127-311 190-375 (714)
363 PRK05367 glycine dehydrogenase 99.5 1.5E-11 3.2E-16 132.5 30.2 326 80-458 61-437 (954)
364 PLN02414 glycine dehydrogenase 99.5 1.9E-11 4E-16 131.2 30.0 332 81-459 89-465 (993)
365 KOG1402 Ornithine aminotransfe 99.5 8.2E-12 1.8E-16 113.4 23.0 335 92-462 57-426 (427)
366 KOG1358 Serine palmitoyltransf 99.5 2.1E-12 4.5E-17 119.9 19.6 341 92-463 92-465 (467)
367 PF00202 Aminotran_3: Aminotra 99.5 5.2E-13 1.1E-17 129.6 15.8 239 92-348 14-292 (339)
368 PRK12462 phosphoserine aminotr 99.5 7.4E-11 1.6E-15 113.7 27.3 324 97-462 6-361 (364)
369 PRK15399 lysine decarboxylase 99.4 1.7E-10 3.6E-15 119.3 29.2 153 153-315 210-380 (713)
370 PLN02994 1-aminocyclopropane-1 99.4 5.7E-13 1.2E-17 112.5 7.9 82 104-190 70-153 (153)
371 COG1982 LdcC Arginine/lysine/o 99.4 1.6E-10 3.4E-15 114.8 25.9 223 153-385 85-320 (557)
372 PF06838 Met_gamma_lyase: Meth 99.3 2.8E-10 6.1E-15 105.9 20.0 176 136-326 55-248 (403)
373 TIGR00461 gcvP glycine dehydro 99.3 3.3E-09 7.1E-14 112.8 30.6 328 79-458 48-426 (939)
374 PF00282 Pyridoxal_deC: Pyrido 99.3 6.4E-10 1.4E-14 109.0 20.3 272 111-394 55-371 (373)
375 PF00392 GntR: Bacterial regul 99.2 1.3E-13 2.8E-18 98.8 -4.5 53 8-61 9-64 (64)
376 COG3033 TnaA Tryptophanase [Am 99.2 3.8E-09 8.3E-14 97.5 22.5 357 86-463 29-444 (471)
377 COG2186 FadR Transcriptional r 99.2 2.3E-12 4.9E-17 118.4 -1.5 56 8-64 19-77 (241)
378 COG2188 PhnF Transcriptional r 99.2 1.8E-12 3.9E-17 118.9 -2.5 55 9-64 17-74 (236)
379 COG1921 SelA Selenocysteine sy 99.2 1.7E-08 3.6E-13 96.3 23.5 221 109-348 40-268 (395)
380 TIGR02404 trehalos_R_Bsub treh 99.2 2.3E-12 5E-17 118.6 -2.5 54 9-63 10-66 (233)
381 TIGR02325 C_P_lyase_phnF phosp 99.1 3E-12 6.4E-17 118.4 -2.3 53 10-63 19-74 (238)
382 PRK14999 histidine utilization 99.1 3.1E-12 6.7E-17 118.2 -2.4 54 9-63 22-78 (241)
383 PRK11402 DNA-binding transcrip 99.1 4E-12 8.6E-17 117.6 -2.2 55 9-64 19-76 (241)
384 TIGR02018 his_ut_repres histid 99.1 4.3E-12 9.3E-17 116.5 -2.5 54 9-63 11-67 (230)
385 PF02347 GDC-P: Glycine cleava 99.1 4E-08 8.7E-13 96.0 24.5 329 81-457 51-429 (429)
386 PRK09764 DNA-binding transcrip 99.1 6.4E-12 1.4E-16 116.0 -2.6 54 9-63 15-71 (240)
387 COG0403 GcvP Glycine cleavage 99.1 2.6E-07 5.6E-12 87.9 28.1 337 81-460 61-447 (450)
388 TIGR03811 tyr_de_CO2_Ent tyros 99.1 1.9E-07 4E-12 96.2 29.1 280 108-393 95-500 (608)
389 KOG1383 Glutamate decarboxylas 99.1 4.5E-08 9.7E-13 93.8 21.9 308 130-466 115-449 (491)
390 PRK10079 phosphonate metabolis 99.0 1.3E-11 2.7E-16 114.2 -2.5 52 10-63 23-77 (241)
391 KOG2467 Glycine/serine hydroxy 99.0 5E-07 1.1E-11 83.9 26.5 334 97-461 43-424 (477)
392 PRK04984 fatty acid metabolism 99.0 1.9E-11 4.1E-16 113.1 -2.5 54 9-63 17-73 (239)
393 KOG1403 Predicted alanine-glyo 99.0 6.9E-08 1.5E-12 87.1 18.5 329 109-462 63-436 (452)
394 TIGR02812 fadR_gamma fatty aci 98.9 7.6E-11 1.6E-15 108.7 -2.1 54 9-63 16-72 (235)
395 PRK10225 DNA-binding transcrip 98.9 8.3E-11 1.8E-15 109.9 -2.6 54 9-63 19-75 (257)
396 PRK09990 DNA-binding transcrip 98.9 8.4E-11 1.8E-15 109.5 -2.7 55 9-64 17-74 (251)
397 PRK11523 DNA-binding transcrip 98.9 8.6E-11 1.9E-15 109.5 -2.6 54 9-63 18-74 (253)
398 COG1003 GcvP Glycine cleavage 98.9 7.5E-07 1.6E-11 84.8 23.6 309 130-466 104-450 (496)
399 PRK09464 pdhR transcriptional 98.9 9.3E-11 2E-15 109.4 -2.6 54 9-63 20-76 (254)
400 PRK10421 DNA-binding transcrip 98.9 1.1E-10 2.3E-15 108.9 -2.8 54 9-63 12-68 (253)
401 COG4100 Cystathionine beta-lya 98.9 1.2E-07 2.5E-12 85.7 15.6 176 137-324 67-257 (416)
402 PRK03837 transcriptional regul 98.8 2.6E-10 5.7E-15 105.6 -2.0 54 9-63 23-79 (241)
403 PRK12566 glycine dehydrogenase 98.8 8.3E-06 1.8E-10 86.9 29.5 328 80-458 64-439 (954)
404 PF03841 SelA: L-seryl-tRNA se 98.8 1E-08 2.3E-13 96.8 7.1 255 109-377 19-296 (367)
405 TIGR03337 phnR transcriptional 98.8 5.3E-10 1.2E-14 102.8 -2.5 56 8-64 10-68 (231)
406 COG1932 SerC Phosphoserine ami 98.7 6.2E-06 1.3E-10 77.4 22.3 327 96-464 6-364 (365)
407 PF05889 SLA_LP_auto_ag: Solub 98.7 2.9E-06 6.4E-11 81.1 20.0 297 144-462 65-389 (389)
408 smart00345 HTH_GNTR helix_turn 98.6 1.4E-09 3E-14 77.0 -2.8 51 10-61 7-60 (60)
409 PRK11414 colanic acid/biofilm 98.6 6E-09 1.3E-13 95.1 -1.7 53 9-63 21-76 (221)
410 TIGR03338 phnR_burk phosphonat 98.6 4.9E-09 1.1E-13 95.1 -2.3 52 10-63 22-76 (212)
411 PRK11534 DNA-binding transcrip 98.6 5.9E-09 1.3E-13 95.3 -2.1 53 9-63 17-72 (224)
412 KOG1405 4-aminobutyrate aminot 98.3 6.8E-05 1.5E-09 69.7 16.5 214 216-463 254-483 (484)
413 KOG0629 Glutamate decarboxylas 98.2 0.00028 6.1E-09 67.4 20.9 324 123-460 129-506 (510)
414 COG1802 GntR Transcriptional r 98.1 3E-07 6.5E-12 84.4 -1.2 53 9-63 26-81 (230)
415 PF14502 HTH_41: Helix-turn-he 98.1 2.1E-07 4.5E-12 59.9 -1.6 43 18-61 1-48 (48)
416 KOG0628 Aromatic-L-amino-acid/ 98.1 0.00067 1.5E-08 65.6 20.5 320 125-464 103-472 (511)
417 KOG3846 L-kynurenine hydrolase 97.8 0.0041 8.9E-08 57.1 19.5 333 92-465 64-463 (465)
418 cd07377 WHTH_GntR Winged helix 97.8 1.3E-06 2.9E-11 62.8 -2.5 51 10-61 12-65 (66)
419 KOG3843 Predicted serine hydro 97.7 0.00043 9.4E-09 61.9 10.8 298 146-465 68-404 (432)
420 PLN02672 methionine S-methyltr 97.3 0.013 2.9E-07 64.4 17.5 230 96-341 389-641 (1082)
421 PRK11014 transcriptional repre 97.1 4.5E-05 9.7E-10 64.0 -2.8 46 10-57 13-61 (141)
422 KOG2040 Glycine dehydrogenase 96.9 0.23 4.9E-06 50.7 20.1 302 131-460 578-915 (1001)
423 TIGR02787 codY_Gpos GTP-sensin 96.6 0.00023 4.9E-09 63.2 -2.4 41 22-63 198-242 (251)
424 KOG2790 Phosphoserine aminotra 96.4 0.77 1.7E-05 42.2 18.9 329 95-462 7-367 (370)
425 KOG2040 Glycine dehydrogenase 96.4 0.78 1.7E-05 47.0 20.2 308 101-458 125-478 (1001)
426 PF13730 HTH_36: Helix-turn-he 95.8 0.00072 1.6E-08 46.4 -2.6 33 18-50 20-55 (55)
427 TIGR01610 phage_O_Nterm phage 95.5 0.0012 2.7E-08 51.0 -2.8 41 20-61 44-87 (95)
428 smart00529 HTH_DTXR Helix-turn 94.8 0.0031 6.8E-08 48.9 -2.4 37 26-63 2-41 (96)
429 PRK12423 LexA repressor; Provi 94.7 0.0029 6.3E-08 56.6 -3.2 39 24-62 26-69 (202)
430 PF01726 LexA_DNA_bind: LexA D 93.3 0.0049 1.1E-07 43.7 -3.4 33 23-55 25-61 (65)
431 PF08279 HTH_11: HTH domain; 92.7 0.0052 1.1E-07 42.1 -4.0 36 24-60 16-55 (55)
432 PF08222 HTH_CodY: CodY helix- 92.0 0.0082 1.8E-07 40.1 -3.4 35 28-62 9-47 (61)
433 PF13412 HTH_24: Winged helix- 91.6 0.0097 2.1E-07 39.4 -3.6 28 24-51 18-48 (48)
434 TIGR00122 birA_repr_reg BirA b 90.8 0.023 4.9E-07 41.0 -2.6 39 25-64 15-56 (69)
435 PF02082 Rrf2: Transcriptional 90.0 0.023 5E-07 42.7 -3.3 42 20-61 22-66 (83)
436 cd00092 HTH_CRP helix_turn_hel 89.9 0.027 5.8E-07 40.2 -2.9 36 24-61 26-64 (67)
437 smart00419 HTH_CRP helix_turn_ 89.8 0.024 5.3E-07 37.3 -2.9 30 24-53 9-41 (48)
438 PF01325 Fe_dep_repress: Iron 89.4 0.024 5.2E-07 39.5 -3.3 35 21-55 20-57 (60)
439 PF03444 HrcA_DNA-bdg: Winged 88.5 0.061 1.3E-06 39.1 -1.8 41 20-61 21-64 (78)
440 PF00325 Crp: Bacterial regula 88.4 0.021 4.6E-07 33.9 -3.5 25 26-50 5-32 (32)
441 TIGR00738 rrf2_super rrf2 fami 88.2 0.074 1.6E-06 43.9 -1.8 44 18-61 20-66 (132)
442 COG4109 Predicted transcriptio 88.1 0.11 2.4E-06 49.0 -0.9 42 17-60 14-58 (432)
443 COG1654 BirA Biotin operon rep 87.6 0.06 1.3E-06 39.6 -2.3 38 25-63 21-62 (79)
444 TIGR00498 lexA SOS regulatory 86.9 0.088 1.9E-06 47.0 -2.2 32 24-55 26-61 (199)
445 PRK11050 manganese transport r 86.6 0.07 1.5E-06 45.3 -2.8 38 25-63 53-93 (152)
446 PRK11886 bifunctional biotin-- 85.6 0.11 2.4E-06 50.1 -2.4 38 26-64 21-62 (319)
447 TIGR02944 suf_reg_Xantho FeS a 84.9 0.13 2.8E-06 42.4 -2.0 35 21-55 23-60 (130)
448 COG2102 Predicted ATPases of P 84.8 7.7 0.00017 34.7 8.9 99 156-265 3-116 (223)
449 smart00550 Zalpha Z-DNA-bindin 84.4 0.099 2.1E-06 37.5 -2.5 35 26-60 25-62 (68)
450 PRK11920 rirA iron-responsive 83.0 0.17 3.7E-06 42.9 -2.1 42 19-61 21-65 (153)
451 PF04703 FaeA: FaeA-like prote 82.9 0.06 1.3E-06 37.6 -4.0 35 24-58 16-53 (62)
452 PF01978 TrmB: Sugar-specific 82.2 0.068 1.5E-06 38.3 -4.2 31 25-55 24-57 (68)
453 COG1959 Predicted transcriptio 82.1 0.23 5.1E-06 41.9 -1.6 44 18-61 20-66 (150)
454 smart00420 HTH_DEOR helix_turn 82.1 0.12 2.5E-06 34.7 -2.9 32 24-55 15-49 (53)
455 PF12802 MarR_2: MarR family; 81.5 0.08 1.7E-06 37.0 -4.0 31 25-55 23-56 (62)
456 TIGR02010 IscR iron-sulfur clu 81.4 0.22 4.7E-06 41.3 -2.0 43 19-61 21-66 (135)
457 TIGR01019 sucCoAalpha succinyl 81.3 21 0.00046 33.7 11.0 70 183-265 47-118 (286)
458 PF08220 HTH_DeoR: DeoR-like h 80.4 0.12 2.6E-06 35.6 -3.2 31 25-55 16-49 (57)
459 PF02796 HTH_7: Helix-turn-hel 79.4 0.16 3.5E-06 33.0 -2.7 22 25-46 23-44 (45)
460 PRK04158 transcriptional repre 78.7 0.69 1.5E-05 42.1 0.2 35 28-62 206-244 (256)
461 TIGR02702 SufR_cyano iron-sulf 78.6 0.13 2.9E-06 46.0 -4.5 38 14-53 8-48 (203)
462 PF13936 HTH_38: Helix-turn-he 78.2 0.16 3.6E-06 32.8 -2.9 22 24-45 21-42 (44)
463 PF05368 NmrA: NmrA-like famil 77.9 11 0.00024 34.2 8.0 96 157-265 1-98 (233)
464 COG5340 Predicted transcriptio 77.7 0.56 1.2E-05 41.3 -0.7 42 18-61 25-69 (269)
465 smart00346 HTH_ICLR helix_turn 77.5 0.26 5.6E-06 37.5 -2.6 37 24-61 21-60 (91)
466 PF05732 RepL: Firmicute plasm 77.4 0.21 4.5E-06 42.9 -3.4 44 21-66 73-120 (165)
467 PRK09802 DNA-binding transcrip 77.4 54 0.0012 30.6 12.5 32 24-55 32-66 (269)
468 COG0031 CysK Cysteine synthase 77.1 23 0.0005 33.5 9.7 109 129-240 36-149 (300)
469 smart00418 HTH_ARSR helix_turn 76.1 0.24 5.2E-06 34.6 -2.9 30 25-54 12-44 (66)
470 PF09339 HTH_IclR: IclR helix- 76.0 0.15 3.2E-06 34.4 -3.8 28 25-52 20-50 (52)
471 PF01047 MarR: MarR family; I 75.0 0.14 3E-06 35.4 -4.3 31 24-54 18-51 (59)
472 PF13545 HTH_Crp_2: Crp-like h 74.8 0.21 4.5E-06 36.6 -3.6 29 25-53 30-61 (76)
473 PRK05678 succinyl-CoA syntheta 74.3 21 0.00046 33.8 8.8 71 182-265 48-120 (291)
474 PRK10857 DNA-binding transcrip 73.7 0.55 1.2E-05 40.3 -1.8 44 18-61 20-66 (164)
475 KOG1201 Hydroxysteroid 17-beta 71.3 31 0.00067 32.5 8.9 139 152-307 36-182 (300)
476 PRK03902 manganese transport t 69.5 0.53 1.1E-05 39.4 -2.8 39 23-62 22-63 (142)
477 TIGR00290 MJ0570_dom MJ0570-re 69.5 44 0.00096 30.2 9.3 98 157-265 4-115 (223)
478 TIGR03697 NtcA_cyano global ni 67.0 0.65 1.4E-05 40.9 -2.9 31 25-55 145-178 (193)
479 COG4465 CodY Pleiotropic trans 66.3 1.3 2.8E-05 38.8 -1.0 36 27-62 208-247 (261)
480 PRK14165 winged helix-turn-hel 66.2 0.62 1.4E-05 41.8 -3.1 37 25-61 23-62 (217)
481 PLN02591 tryptophan synthase 65.8 1.1E+02 0.0025 28.2 17.0 167 83-266 19-194 (250)
482 PLN00125 Succinyl-CoA ligase [ 65.5 69 0.0015 30.5 10.2 74 179-266 50-126 (300)
483 COG1349 GlpR Transcriptional r 65.4 57 0.0012 30.2 9.6 31 25-55 21-54 (253)
484 cd06448 L-Ser-dehyd Serine deh 65.3 1.3E+02 0.0029 28.8 12.5 96 154-254 51-149 (316)
485 PRK03573 transcriptional regul 64.1 0.84 1.8E-05 38.2 -2.6 30 25-54 48-80 (144)
486 PF13384 HTH_23: Homeodomain-l 63.7 0.69 1.5E-05 30.6 -2.6 15 25-39 19-33 (50)
487 PRK08265 short chain dehydroge 63.6 57 0.0012 30.0 9.4 96 154-254 6-108 (261)
488 PRK11512 DNA-binding transcrip 63.5 0.82 1.8E-05 38.3 -2.8 32 24-55 55-89 (144)
489 PRK00215 LexA repressor; Valid 63.5 1.1 2.3E-05 40.2 -2.2 34 22-55 22-59 (205)
490 PF02662 FlpD: Methyl-viologen 63.4 20 0.00043 29.1 5.4 56 200-259 29-89 (124)
491 TIGR03573 WbuX N-acetyl sugar 63.0 75 0.0016 30.9 10.4 109 154-277 60-176 (343)
492 TIGR01470 cysG_Nterm siroheme 62.0 1.1E+02 0.0023 27.3 10.4 96 152-269 7-103 (205)
493 TIGR02717 AcCoA-syn-alpha acet 61.1 33 0.00072 34.8 7.8 82 186-275 53-135 (447)
494 TIGR02337 HpaR homoprotocatech 60.4 1.1 2.4E-05 36.0 -2.4 31 24-54 43-76 (118)
495 COG1737 RpiR Transcriptional r 59.8 23 0.00049 33.4 6.0 26 24-49 37-65 (281)
496 PF09012 FeoC: FeoC like trans 59.7 0.69 1.5E-05 33.2 -3.3 32 24-55 15-49 (69)
497 PRK10411 DNA-binding transcrip 59.5 1.8 3.9E-05 39.8 -1.5 38 23-61 18-58 (240)
498 COG1339 Transcriptional regula 59.2 1.4 3E-05 38.2 -2.1 41 21-63 18-62 (214)
499 PRK04296 thymidine kinase; Pro 59.1 36 0.00077 29.9 6.8 94 165-272 18-117 (190)
500 cd01561 CBS_like CBS_like: Thi 59.1 1.4E+02 0.003 28.1 11.3 54 155-208 54-108 (291)
No 1
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-73 Score=567.62 Aligned_cols=425 Identities=23% Similarity=0.356 Sum_probs=371.9
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccccCccccccccCCchHHHHHHH
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVDVSLSPRVNAVKPSKTVAITDQ 85 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~~~~~~~~~~~~~~~~~~~~~~ 85 (470)
-..|.+|+|+||+||||+|+||+.|+||++| ||++|+.||||++++| |+.++.....+.... .....
T Consensus 14 ~~~I~~g~l~~g~rLPs~R~la~~l~vs~~Tv~~ay~~L~~~G~i~~~~g-s~~~~~~~~~~~~~~---------~~~~~ 83 (459)
T COG1167 14 REAILSGRLKPGDRLPSIRQLAQDLGVSRSTVSRAYEELEARGYIESRPG-SAPPSGRPVRLELLK---------PSDPE 83 (459)
T ss_pred HHHHHcCCCCCCCcCCcHHHHHHHhCCcHHHHHHHHHHHHhCcceeeccC-CCcccccccccchhh---------hhhcc
Confidence 3579999999999999999999999999999 9999999999999999 754443221110000 00000
Q ss_pred HHHHHhcCCCeEEccCCCCCCCC-h-HHHHHHHHHHHHc---C-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEE
Q 012124 86 ATALAQAGVSVIRLAAGEPDFDT-P-VLIAEAGINAIRE---G-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV 159 (470)
Q Consensus 86 ~~~~~~~~~~~i~l~~g~~~~~~-~-~~~~~a~~~~~~~---~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~i 159 (470)
.. ......++|+.|.|+... | ..+.+++.+.+.. . ...|+++.|.++||++|++++...+|+.+++++|++
T Consensus 84 ~~---~~~~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii 160 (459)
T COG1167 84 LL---EDDPSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI 160 (459)
T ss_pred cc---cCCCceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE
Confidence 00 234578999999987655 4 4566666666643 2 578888899999999999999988999999999999
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEEE-cCCC
Q 012124 160 SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLIL-CSPS 237 (470)
Q Consensus 160 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l-~~p~ 237 (470)
|+|++++++++++.+++|||+|++++|+|++...+++..|+++++||++.++ +|+|.|++.++. ++|++|+ ++.|
T Consensus 161 T~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G---~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 161 TSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG---IDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred eCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCC---CCHHHHHHHHhhcCCcEEEECCCCC
Confidence 9999999999999999999999999999999999999999999999997443 999999999965 7898876 7779
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
||||.+||.+++++|+++|++| |++|||||+|++|.|++.+.+++..++. .++|||++||||+++ ||+|+||+++|+
T Consensus 238 NPtG~tms~~rR~~Ll~lA~~~-~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~ 314 (459)
T COG1167 238 NPTGVTMSLERRKALLALAEKY-DVLIIEDDYYGELRYDGPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPP 314 (459)
T ss_pred CCCCCccCHHHHHHHHHHHHHc-CCeEEeeCcchhhhcCCCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCH
Confidence 9999999999999999999999 9999999999999999888888888887 699999999999996 999999999999
Q ss_pred HHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-C-CCeecCCCceEEEeeec
Q 012124 318 HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-E-GVKMSEPQGAFYLFIDF 395 (470)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~-g~~~~~~~~g~~~~~~~ 395 (470)
++++.+...+...+.+++.+.|.+++.++.+|.+ ++|++++++.|++|++.+.+.|.+. + ++.+..|.+|||+|+++
T Consensus 315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l 393 (459)
T COG1167 315 ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLEL 393 (459)
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEc
Confidence 9999999999999999999999999999998887 9999999999999999999999985 4 57899999999999999
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCCCCC----CcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAFGDD----TCIRISYAA-SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p-g~~f~~~----~~iRls~~~-~~~~i~~~l~~l~~~l~~~~ 465 (470)
|+.+ +..++.+.++++ ||.+.| |..|... +++||+|+. +++++++++.+|.+++++..
T Consensus 394 ~~~~-----------~~~~l~~~a~~~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 394 PEGI-----------DARELLAAALEK-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCCC-----------CHHHHHHHHHHC-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9875 888999888766 888888 8888653 489999999 89999999999999998764
No 2
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.3e-68 Score=535.04 Aligned_cols=409 Identities=18% Similarity=0.202 Sum_probs=349.5
Q ss_pred ccccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccccCccccccccCCchHHHHHH
Q 012124 8 STSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVDVSLSPRVNAVKPSKTVAITD 84 (470)
Q Consensus 8 ~~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~~~~~~~~~~~~~~~~~~~~~ 84 (470)
..+.|.+|.|+||+||||+|+||++|+|||+| ||++|++||+|++++| +||||...... . ..
T Consensus 14 i~~~i~~g~l~~g~~lps~r~la~~~~vsr~tv~~a~~~L~~~g~i~~~~~-~G~~v~~~~~~--~---~~--------- 78 (431)
T PRK15481 14 IRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGR-NGTVIRGSPSP--V---AL--------- 78 (431)
T ss_pred HHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeCC-CceEEccCcch--h---hh---------
Confidence 45689999999999999999999999999999 9999999999999999 99999643210 0 00
Q ss_pred HHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 85 QATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 85 ~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
.....+...++|+.|.|+.++++.+.+++.+... ....|+++.|.++||+++++++.+..+ .+++|++|+|++
T Consensus 79 ---~~~~~~~~~i~L~~g~p~~~~~p~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~ 151 (431)
T PRK15481 79 ---EGGDPGTPLHDLAGGNPDPQRLPDLSRYFARLSR-TPRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAI 151 (431)
T ss_pred ---cccCCcchhhhhhcCCCChhHhHHHHHHHHHhhh-hhhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcH
Confidence 0001223468999999998876777777777554 356799999999999999999875322 356999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEc-CCCCCcccC
Q 012124 165 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSV 243 (470)
Q Consensus 165 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~-~p~nPtG~~ 243 (470)
++|.+++.++++|||.|++++|+|+.+...++..|++++.+|++.+ ++|+|.|++++++++++++++ +||||||.+
T Consensus 152 ~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~ 228 (431)
T PRK15481 152 DAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCS 228 (431)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999643 389999999998789998885 999999999
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHH
Q 012124 244 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 323 (470)
Q Consensus 244 ~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l 323 (470)
+|.+++++|+++|+++++++||+||+|.+|.+++. .+.... ..+++|+++||||.|+ ||+|+||+++++++++.+
T Consensus 229 ~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~--~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~ 303 (431)
T PRK15481 229 LSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ--TTQRWALIRSVSKALG-PDLRLAFVASDSATSARL 303 (431)
T ss_pred CCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC--CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHH
Confidence 99999999999999876799999999999876432 222222 2479999999999999 999999999999999999
Q ss_pred HHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcc
Q 012124 324 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 403 (470)
.........+.+.+.|.++..+|+++.+ .+|++++++.|+++++.+.+.|++. |+.+..|.+|+|+|+++|.
T Consensus 304 ~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~------ 375 (431)
T PRK15481 304 RLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT------ 375 (431)
T ss_pred HHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC------
Confidence 8776666667899999999999998765 7889999999999999999999987 8888789999999999974
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 012124 404 EGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA-SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 404 ~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~-~~~~i~~~l~~l~~~l~ 462 (470)
+..++++.|.+ +||.+.||..|+. .+++||+++. +++++++++++|++++.
T Consensus 376 -------~~~~~~~~l~~-~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 -------DSQATALTLAK-SGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred -------CHHHHHHHHHH-CCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 45778888765 5999999999964 3589999998 88999999999999875
No 3
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-65 Score=501.76 Aligned_cols=358 Identities=43% Similarity=0.728 Sum_probs=333.1
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCc-EEEecChHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ-ILVSNGAKQSILQAVL 172 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-i~it~g~~~al~~~~~ 172 (470)
.++|+|+.|+|++++|+.+++++.+++..+...|++..|.++||++|++++.+++|+.+++++ |++|+|++++|..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 479999999999999999999999999875437779999999999999999999998888876 9999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCC-CCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
++++|||+|++++|.|+.|...+..+|++++.++++.+ ++|.+|++.|++++++++|+|++++||||||.+++++++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~ 187 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKA 187 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHH
Confidence 99999999999999999999999999999999998655 48999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC-HHHHHHHHHHhhhc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF 330 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~ 330 (470)
|+++|++| |++||.||+|.++.|++..+.++..+.+..+++|.+.||||.++|+|||+||++++ +++++.+.+++...
T Consensus 188 i~~~a~~~-~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~ 266 (393)
T COG0436 188 IVELAREH-DIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL 266 (393)
T ss_pred HHHHHHHc-CeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence 99999999 99999999999999998667777777665689999999999999999999999999 88999999999999
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC-CCceEEEeeeccCccCCcccCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKI 409 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (470)
.+|++.+.|.++.++|+.... ..+++.+++.|++||+.+.+.|.+++|+.+.. |+++||+|++++...
T Consensus 267 ~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~---------- 335 (393)
T COG0436 267 TSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELL---------- 335 (393)
T ss_pred ccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCC----------
Confidence 999999999999999997432 46888899999999999999999998899888 889999999998742
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 410 ENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 410 ~~~~~l~~~L~~~~gI~v~pg~~f~~~---~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
++.+|+.+|++++||.|.||..|+.+ +++|+|++.+.+++++++++|+++++..
T Consensus 336 -d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 336 -DSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred -CHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999975 7999999998799999999999998764
No 4
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=6.6e-59 Score=461.94 Aligned_cols=378 Identities=23% Similarity=0.389 Sum_probs=324.9
Q ss_pred cccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHc
Q 012124 70 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEEN 148 (470)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~ 148 (470)
++..++......+..........|+++|+|+.|+|++++++.+.+++.+.+.. ....|+++.|.++||++|++|+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~ 85 (388)
T PRK07366 6 RLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRF 85 (388)
T ss_pred hhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhh
Confidence 34444444444555555566667889999999999998899999999988764 35679889999999999999999888
Q ss_pred CCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 149 GLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 149 g~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
|+.++++ +|++|+|+++++.+++.++++|||+|++++|+|+.+...++..|++++.+|++.++++.+|++.+++.+.++
T Consensus 86 g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 165 (388)
T PRK07366 86 GLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQ 165 (388)
T ss_pred CCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhccc
Confidence 9989998 699999999999999999999999999999999999999999999999999987777889999998888778
Q ss_pred ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCC-cccccccCCCCCceEEEeccCcccccc
Q 012124 228 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++.. .+++.+++...+++|+++||||.+|+|
T Consensus 166 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~ 244 (388)
T PRK07366 166 ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQH-DLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMG 244 (388)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 99999999999999999999999999999999 9999999999999987643 456666665456799999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC
Q 012124 307 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 386 (470)
Q Consensus 307 G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 386 (470)
|+|+||+++++++++.+.+.+.....+.+...|.++...+.. .++|+++.++.|+++++.+.+.|+++ |+.+..|.
T Consensus 245 GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~---~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~ 320 (388)
T PRK07366 245 GFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTG---PQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPE 320 (388)
T ss_pred chhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 999999999999999999888777766655445555555543 37899999999999999999999988 78877899
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
+|+|+|+++|+.+. .++.++++.|++++||.+.||..|+. ++++||+++.+++++++++++|++++
T Consensus 321 ~g~f~~~~~~~~~~---------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 321 ATMYVWAKLPEPWQ---------GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred eeEEEEEECCcccC---------CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 99999999986321 14678888887777999999999974 47999999988999999999998753
No 5
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-58 Score=460.01 Aligned_cols=375 Identities=26% Similarity=0.476 Sum_probs=330.4
Q ss_pred cccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 68 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
+.+.....++....+.....+....++++|+|+.|.|++.+++.+.+++.+.+.. ....|+ +.|.++||++|++|+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~ 84 (399)
T PRK07681 6 ATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNN 84 (399)
T ss_pred hHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHH
Confidence 3444445555555555555555556778999999999988888999999887754 234453 58999999999999999
Q ss_pred HcCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc
Q 012124 147 ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 147 ~~g~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+|+.+++ ++|++|+|+++++.+++.+++++||.|++++|+|+.+...++..|++++.+|++.+++|.+|++.+++++.
T Consensus 85 ~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 164 (399)
T PRK07681 85 THNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA 164 (399)
T ss_pred HhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 89999998 89999999999999999999999999999999999999999999999999999877778899999999988
Q ss_pred CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 226 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
++++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++.++++..+++|+++||||.+|+
T Consensus 165 ~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 243 (399)
T PRK07681 165 DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKH-NIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSL 243 (399)
T ss_pred ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 8899999999999999999999999999999999 999999999999998766556666666545789999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 306 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
||+|+||+++++++++.+........++++.+.|.++..+|.++ .+++++.++.|+++++.+.+.|++. |+.+..|
T Consensus 244 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p 319 (399)
T PRK07681 244 AGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG---AAFCEKNRGIYQERRDTLVDGFRTF-GWNVDKP 319 (399)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCC
Confidence 99999999999999999998887777789999999999999873 5789999999999999999999988 8888788
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
.+|+|+|+++++.+ ++.++++.|++++||.+.||..|+. ++++|++++.+++++++++++|++
T Consensus 320 ~~g~f~~~~l~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 320 AGSMFVWAEIPKGW-----------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred CeeeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 99999999998653 6788999998867999999999874 479999999888999999999988
No 6
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=5.7e-58 Score=456.63 Aligned_cols=374 Identities=32% Similarity=0.595 Sum_probs=328.9
Q ss_pred ccccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
++.++..+.......+.+.. .+.++|+|+.|.|++++|+.+.+++.+.+.++...|+++.|.++||+++++++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~ 106 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLA-----IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKK 106 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHh-----hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 34445555555544443332 2347899999999998899999999998877668899999999999999999999
Q ss_pred HcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc
Q 012124 147 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 147 ~~g~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+|++++++ +|++|+|+++++.+++.++++|||+|++++|+|+.+...++..|++++.++++.++ +.+|++.|++.++
T Consensus 107 ~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~~ 185 (413)
T PLN00175 107 DTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAFT 185 (413)
T ss_pred HhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhcC
Confidence 889988987 79999999999999999999999999999999999999999999999999997544 7899999999998
Q ss_pred CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 226 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
+++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++ ...++.++++..+++|+++||||.|++
T Consensus 186 ~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~~ 263 (413)
T PLN00175 186 SKTRAILINTPHNPTGKMFTREELELIASLCKEN-DVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFSL 263 (413)
T ss_pred cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhccC
Confidence 8999999999999999999999999999999999 99999999999998865 344666666556899999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 306 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
+|+|+||+++++++++.+........++++.+.|.++..+|+. .+.|+++.++.|+++++.+.+.|++. |+.+..|
T Consensus 264 ~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p 339 (413)
T PLN00175 264 TGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRA---PESYYEELKRDYSAKKDILVEGLKEV-GFKVYPS 339 (413)
T ss_pred cchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence 9999999999999999999888777889999999999999986 36789999999999999999999988 8888899
Q ss_pred CceEEEeeeccC-ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 386 QGAFYLFIDFST-YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-----DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 386 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-----~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
.+|||+|++++. .. .++.++++.|++++||.+.||..|+. .+++||+++.+++++++++++|++
T Consensus 340 ~g~~f~~~~~~~~~~----------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~ 409 (413)
T PLN00175 340 SGTYFVMVDHTPFGF----------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKT 409 (413)
T ss_pred CeeEEEEEeccccCC----------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHH
Confidence 999999999853 11 14678999998778999999998852 369999999999999999999999
Q ss_pred HHH
Q 012124 460 GLL 462 (470)
Q Consensus 460 ~l~ 462 (470)
+++
T Consensus 410 ~~~ 412 (413)
T PLN00175 410 KLK 412 (413)
T ss_pred HHh
Confidence 876
No 7
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-57 Score=452.11 Aligned_cols=382 Identities=26% Similarity=0.451 Sum_probs=328.1
Q ss_pred ccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcC
Q 012124 71 VNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENG 149 (470)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g 149 (470)
+.....+....+.....+....+.++++|+.|.|+.++|+.+++++.+.+.. ....|+++.|.++||+++++|+.+.+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~ 89 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYN 89 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3344555556666666677777888999999999988777777777776654 468899999999999999999998889
Q ss_pred CCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhH----hhhc
Q 012124 150 LSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL----ESKL 224 (470)
Q Consensus 150 ~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l----~~~l 224 (470)
+.++++ +|++|+|+++++.+++.++++|||.|++++|+|+.+...++..|+++++++++.++++++|++.+ ++++
T Consensus 90 ~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 169 (403)
T PRK08636 90 VDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKAL 169 (403)
T ss_pred CCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHH
Confidence 988987 79999999999999999999999999999999999999999999999999986556688998754 5555
Q ss_pred c---CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc
Q 012124 225 T---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 225 ~---~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK 301 (470)
+ .+++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++...+++..++...+++|+++||||
T Consensus 170 ~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK 248 (403)
T PRK08636 170 RESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE-RFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSK 248 (403)
T ss_pred hhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEeccc
Confidence 3 4788899999999999999999999999999999 99999999999998876555677777654468899999999
Q ss_pred ccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe
Q 012124 302 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 381 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 381 (470)
.+|+||+|+||+++|+++++.+.+.......+++.+.|.++..+++. ...|++++++.|+++++.+.+.|++. |+.
T Consensus 249 ~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 324 (403)
T PRK08636 249 SYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG---DQSCVEEIRETYRKRRDVLIESFANA-GWE 324 (403)
T ss_pred ccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 99889999999999999999999887766677888899988877764 36899999999999999999999987 788
Q ss_pred ecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 382 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 382 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
+..|.+|+|+|+++|+.+. ..++.++++.+++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 325 ~~~p~~g~~~~~~l~~~~~--------~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~ 396 (403)
T PRK08636 325 LQKPRASMFVWAKIPEPAR--------HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKK 396 (403)
T ss_pred ccCCCcceEEEEECCCccC--------CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 8889999999999986420 014678888878777999999999975 479999999888999999999999
Q ss_pred HHHhhC
Q 012124 460 GLLTLR 465 (470)
Q Consensus 460 ~l~~~~ 465 (470)
+++.++
T Consensus 397 ~l~~~~ 402 (403)
T PRK08636 397 FLKELE 402 (403)
T ss_pred HHHhhc
Confidence 998754
No 8
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-57 Score=452.42 Aligned_cols=359 Identities=23% Similarity=0.346 Sum_probs=318.3
Q ss_pred CCCeEEccCCCCCC-CChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHHHH
Q 012124 93 GVSVIRLAAGEPDF-DTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQ 169 (470)
Q Consensus 93 ~~~~i~l~~g~~~~-~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al~~ 169 (470)
+.+.|+|+.|.|+. .+|+.+.+++.+.+.. ....|++..|.++||++|++++.+.+|+++++ ++|++|+|+++++..
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 34789999999983 4567888888888765 35679889999999999999999988988888 899999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCc---CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCH
Q 012124 170 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246 (470)
Q Consensus 170 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~ 246 (470)
++.+++++||+|++++|+|+.+...++..|++++.++++ .++++++|++.|+++++++++++++++||||||.+++.
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~ 197 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSA 197 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCH
Confidence 999999999999999999999999999999999999986 23467899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHH
Q 012124 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 326 (470)
Q Consensus 247 ~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~ 326 (470)
+++++|+++|++| +++||+||+|.++.|++...+++..++...+++|+++||||.+++||+|+||+++++++++.+...
T Consensus 198 e~l~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~ 276 (405)
T PRK06207 198 EEIAQIAALARRY-GATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL 276 (405)
T ss_pred HHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence 9999999999999 999999999999998765555555554446899999999999999999999999999999999998
Q ss_pred hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCC
Q 012124 327 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF 406 (470)
Q Consensus 327 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 406 (470)
......+.+.+.|.++..+|++ ...++++..+.++++++.+.+.|++++++.+..|.+|+|+|++++...
T Consensus 277 ~~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~------- 346 (405)
T PRK06207 277 QAIVSLRAAGYSQAVLRTWFSE---PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLA------- 346 (405)
T ss_pred HhHhccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccC-------
Confidence 8888888899999999999986 246777888888899999999998887888888999999999998520
Q ss_pred CCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 407 GKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 407 ~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
.+..++++.|++++||.+.||..|+. ++++||+++.+.+++++++++|++++++++
T Consensus 347 ---~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 347 ---VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred ---CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 15788999888777999999999864 579999999988999999999999998765
No 9
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-57 Score=448.64 Aligned_cols=352 Identities=34% Similarity=0.608 Sum_probs=316.6
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 172 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~ 172 (470)
.+++++|+.|+|++.+++.+.+++.+........|+++.|.++||+++++++.+.+|+.+++++|++|+|+++++.+++.
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 107 (384)
T PRK06348 28 FPDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQ 107 (384)
T ss_pred cCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHH
Confidence 35689999999998888888777666665667889999999999999999999888999999999999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
+++++||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++.+++++++|++++||||||.++|.+++++|
T Consensus 108 ~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 108 SILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 99999999999999999999999999999999998666678899999999998899999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+++|+++ +++||+||+|.++.|++ ...++..++...+++|+++||||.+++||+|+||+++++++++.+........+
T Consensus 188 ~~~a~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~ 265 (384)
T PRK06348 188 AKIAIEY-DLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICF 265 (384)
T ss_pred HHHHHHC-CeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccC
Confidence 9999999 99999999999998864 344556665445799999999999999999999999999999999988887778
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC-ccCCcccCCCCCCC
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST-YYGSEAEGFGKIEN 411 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~ 411 (470)
+++.+.|.++..++.. .+++++++++.|+++++.+.+.|++++++.+..|++|||+|++++. .+ +
T Consensus 266 ~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~-----------~ 331 (384)
T PRK06348 266 SAPTISQRAAIYALKH---RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGL-----------S 331 (384)
T ss_pred CCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCC-----------C
Confidence 8999999999999975 4788999999999999999999998878888899999999999974 22 6
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
+.++++.|++++||.+.||..|+. ++++|++++.+++++++++++|+++
T Consensus 332 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 332 SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 788999888777999999999975 4799999988889999999999764
No 10
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.4e-57 Score=456.54 Aligned_cols=379 Identities=22% Similarity=0.361 Sum_probs=314.6
Q ss_pred HHHHHHHHHHhcCCCeEEccCCCC---CCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCc
Q 012124 81 AITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ 156 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~ 156 (470)
.+.....+....|+++++++.|+| ++.+|+.+.+++.+.+.. ...+|++..|.++||+++++|+.+.+|+.+++++
T Consensus 19 ~~~~~~~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~ 98 (433)
T PRK06855 19 NIVAVAKKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDD 98 (433)
T ss_pred HHHHHHHHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhH
Confidence 344445555566788999999999 678899999998887754 4578999999999999999999988899999999
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH-HHHcCCEEEEecCcCCCCCccCHHhHhhhcc--CCceEEEE
Q 012124 157 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLIL 233 (470)
Q Consensus 157 i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--~~~~~i~l 233 (470)
|++|+|++++|.+++. +++|||.|++++|+|+.+... ....|++++.++++++++|.+|++.|+++++ ++++++++
T Consensus 99 I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l 177 (433)
T PRK06855 99 IIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILL 177 (433)
T ss_pred EEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEE
Confidence 9999999999999885 789999999999999998754 3456999999999877788899999999996 46789999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEE
Q 012124 234 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 234 ~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
++||||||.++|.+++++|+++|++| |++||+||+|.++.|++...+++.++.+ ..++|+++||||.+++||+|+||+
T Consensus 178 ~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~i 255 (433)
T PRK06855 178 INPDNPTGAVYPKEILREIVDIAREY-DLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWI 255 (433)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEE
Confidence 99999999999999999999999999 9999999999999987655667777654 247899999999998899999999
Q ss_pred EcC-----H---HHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 314 AGP-----K---HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 314 ~~~-----~---~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
++| + ++++.+..... ...+++.+.|.++..+++++.+ ++|++++++.|++|++.+.+.|++++|+.+..|
T Consensus 256 i~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p 333 (433)
T PRK06855 256 EVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRT 333 (433)
T ss_pred EEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCC
Confidence 973 2 23333333332 2456889999999999988655 789999999999999999999988878888899
Q ss_pred CceEEEeeeccCccCCcccCC----------------CCCCCHHHHHHHHHHcCCEEEECCCCCCCC-CcEEEEeec-CH
Q 012124 386 QGAFYLFIDFSTYYGSEAEGF----------------GKIENSESLCRYLLDKAQVALVPGDAFGDD-TCIRISYAA-SL 447 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~-~~iRls~~~-~~ 447 (470)
++|||+|+++|+.+.....+. +...++.+++..|+++.||.+.||..|+.. .++||+|+. ++
T Consensus 334 ~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~ 413 (433)
T PRK06855 334 NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDE 413 (433)
T ss_pred CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcH
Confidence 999999999986420000000 000135678878888889999999999753 479999997 99
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012124 448 TTLQAAVERIKKGLLTL 464 (470)
Q Consensus 448 ~~i~~~l~~l~~~l~~~ 464 (470)
++|++++++|+++++++
T Consensus 414 ~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 414 EKFEWIYQTLAEKIEEY 430 (433)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999864
No 11
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-57 Score=448.57 Aligned_cols=396 Identities=43% Similarity=0.708 Sum_probs=340.5
Q ss_pred ccccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
+++++....+.....+.+..++....++++++|+.|.|++++++.+.+++.+.+.....+|+++.|.++||+++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 85 (402)
T PRK06107 6 PAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLER 85 (402)
T ss_pred hhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34445555555555555666666667788999999999998888899999998876677899999999999999999998
Q ss_pred HcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 147 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 147 ~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
.+|+.+++++|++|+|+++++..++.+++++||+|++++|+|..|...+...|.+++.++++.++++.+|++.+++.+++
T Consensus 86 ~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~ 165 (402)
T PRK06107 86 RNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP 165 (402)
T ss_pred hcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc
Confidence 88998899999999999999999999999999999999999999999999999999999987666788999999999988
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC-CCCceEEEeccCccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAM 305 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~sK~~~~ 305 (470)
+++++++++||||||.++|.+++++|+++|+++++++||+||+|.++.|.+...+++..+++ ..+++|+++||||.|++
T Consensus 166 ~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 245 (402)
T PRK06107 166 RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAM 245 (402)
T ss_pred CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcC
Confidence 89999999999999999999999999999999547999999999999887655566666543 34799999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 306 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
||+|+||+++++++++.+.........+++.+.|.++..+|.. .+.++++.++.|+++++.+.+.|++++|+.+..|
T Consensus 246 pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 246 TGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG---DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred cccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 9999999999999999999988877888999999999999975 3678999999999999999999998878888899
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
++|||+|++++..............+..+++++|++++||.+.||..|+.++++|++|+.+++++++++++|++++++++
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~ 402 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAALR 402 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhcC
Confidence 99999999985321000000000125678888888888999999999988899999999999999999999999987753
No 12
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=5.5e-57 Score=448.08 Aligned_cols=376 Identities=28% Similarity=0.466 Sum_probs=327.0
Q ss_pred ccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHH
Q 012124 69 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEE 147 (470)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~ 147 (470)
+++....+.....+..........++++|+|+.|+|+.++++.+.+++.+.+... ...|++..|.++||+++++|+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~ 86 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKRE 86 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3444555555556656565555667789999999999887888899988887653 568988999999999999999988
Q ss_pred cCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 148 NGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 148 ~g~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
+|++++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+|++.++++.+|++.+++.+++
T Consensus 87 ~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~ 166 (389)
T PRK08068 87 YGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE 166 (389)
T ss_pred hCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc
Confidence 89888988 89999999999999999999999999999999999999999999999999998666788999999999988
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
+++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++....+..+++|+++||||.||++
T Consensus 167 ~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~-~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~ 245 (389)
T PRK08068 167 KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKH-NIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA 245 (389)
T ss_pred cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc
Confidence 899999999999999999999999999999999 9999999999998886533344444333356899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC
Q 012124 307 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 386 (470)
Q Consensus 307 G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 386 (470)
|+|+||+++++++++.+.+.......+.+++.|.++..++.. ...++++.++.|+++++.+.+.|+++ |+.+..|.
T Consensus 246 GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~ 321 (389)
T PRK08068 246 GWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLS---DQSCVAELVARYESRRNAFISACREI-GWEVDAPK 321 (389)
T ss_pred cceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 999999999999999999888777777777889998888865 36889999999999999999999988 88888899
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
+|+|+|+++++.. ++.++++.|++++||.+.||..|+. ++++|++++.+++++++++++|+++
T Consensus 322 g~~~~~v~~~~~~-----------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 322 GSFFAWMPVPKGY-----------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred eeEEEEEECCCCC-----------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 9999999998643 6789999988777999999999875 5799999998888999999998763
No 13
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=8.1e-57 Score=446.38 Aligned_cols=371 Identities=30% Similarity=0.527 Sum_probs=327.6
Q ss_pred ccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCC
Q 012124 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLS 151 (470)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~ 151 (470)
....+....+.+...+....|+++++|+.|+|++.+++.+++++.+.+.. ....|+++.|.++||+++++|+.+.+|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~ 87 (383)
T TIGR03540 8 NLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVE 87 (383)
T ss_pred cCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCC
Confidence 33344444555556666667889999999999988888999999987764 35789999999999999999999888988
Q ss_pred CCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceE
Q 012124 152 YTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 230 (470)
Q Consensus 152 ~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 230 (470)
++++ +|++|+|+++++..++..++++||+|++++|+|+.+...++..|++++.+|++.++++.+|++.+++.+.+++++
T Consensus 88 ~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~ 167 (383)
T TIGR03540 88 LDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKL 167 (383)
T ss_pred CCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceE
Confidence 8876 699999999999999999999999999999999999999999999999999987777888999999999889999
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccccee
Q 012124 231 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 310 (470)
Q Consensus 231 i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~ 310 (470)
+++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++...+++..++...+++|+++||||.+|++|+|+
T Consensus 168 v~i~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRi 246 (383)
T TIGR03540 168 MFINYPNNPTGAVAPLKFFKELVEFAKEY-NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRI 246 (383)
T ss_pred EEEeCCCCCcCccCCHHHHHHHHHHHHHc-CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCcccee
Confidence 99999999999999999999999999999 99999999999998876556666666644578899999999999999999
Q ss_pred eEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEE
Q 012124 311 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY 390 (470)
Q Consensus 311 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~ 390 (470)
||+++++++++.+.........+++.+.|.++..++.+ ..+|++++++.++++++.+.+.|++. |+.+..|.+|+|
T Consensus 247 G~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~ 322 (383)
T TIGR03540 247 GMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG---PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFY 322 (383)
T ss_pred eEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceE
Confidence 99999999999998887766677888999999999986 37899999999999999999999998 898888999999
Q ss_pred EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 391 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
+|+++++.+ +..+++++|++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 323 ~~~~l~~~~-----------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 323 VWVPVPEGY-----------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred EEEECCCCC-----------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 999998643 6788999887777999999999974 479999999888999999999864
No 14
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=7e-57 Score=447.15 Aligned_cols=376 Identities=32% Similarity=0.564 Sum_probs=330.4
Q ss_pred cccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 68 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
++++....++....+.....+....++++++|+.|+|++.+++.+.+++.+.+.. ....|+++.|.++||+++++|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 84 (385)
T PRK09276 5 ADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKR 84 (385)
T ss_pred hhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 3344455555555555556666667888999999999998888999999988764 357898889999999999999998
Q ss_pred HcCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc
Q 012124 147 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 147 ~~g~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+|+.++++ +|++|+|+++++..++..+++|||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++.+.
T Consensus 85 ~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~ 164 (385)
T PRK09276 85 RFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA 164 (385)
T ss_pred HhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 889888887 5999999999999999999999999999999999999999999999999999766678899999999888
Q ss_pred CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 226 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
+++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++...+++..+++..+++|+++||||.||+
T Consensus 165 ~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 243 (385)
T PRK09276 165 KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKY-DIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNM 243 (385)
T ss_pred ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCC
Confidence 8999999999999999999999999999999999 999999999999988765566776666545789999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 306 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
+|+|+||+++++++++.+.+.+.....+.+.+.|.++..++.+ .+.|++++++.++++++.+.+.|+++ |+.+..|
T Consensus 244 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 319 (385)
T PRK09276 244 TGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG---PQEVVEELRKIYQERRDILVEGLRKL-GLEVEPP 319 (385)
T ss_pred cchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC---cHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC
Confidence 9999999999999999999887766777888899999999975 37899999999999999999999988 8888888
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
.+|+|+|+++++.. +..+++++|++++||.+.||..|+. ++++||+++.+++++.+++++|++
T Consensus 320 ~~~~~~~v~~~~~~-----------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 320 KATFYVWAPVPKGY-----------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred CcceEEEEECCCCC-----------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 99999999998653 6788999888777999999998875 479999999888999999999864
No 15
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=8.2e-57 Score=447.88 Aligned_cols=372 Identities=25% Similarity=0.412 Sum_probs=321.3
Q ss_pred cccccCCchHHHHHHHHHHH-HhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHc
Q 012124 70 RVNAVKPSKTVAITDQATAL-AQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEEN 148 (470)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~ 148 (470)
++..++.+....+.+.+.+. ...|+++|+|+.|+|++++++.+.+++.+.+. ....|+++.|.++||++|++|+.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~ 82 (396)
T PRK09147 4 RLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRY 82 (396)
T ss_pred hhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHh
Confidence 34455566666666666554 34688999999999999888999999888765 57889999999999999999999888
Q ss_pred CCC-CCCC-cEEEecChHHHHHHHHHHhcCC---CCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhh
Q 012124 149 GLS-YTPD-QILVSNGAKQSILQAVLAVCSP---GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 223 (470)
Q Consensus 149 g~~-~~~~-~i~it~g~~~al~~~~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 223 (470)
|++ ++++ +|++|+|+++++.++++++++| ||.|++++|+|+.+...++..|++++.+|++.+++|++|++.+++.
T Consensus 83 g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~ 162 (396)
T PRK09147 83 GLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAE 162 (396)
T ss_pred CCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHH
Confidence 988 8885 9999999999999999999999 8999999999999999999999999999998777889999999988
Q ss_pred ccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC-Cccc-ccc---cC-CCCCceEEEe
Q 012124 224 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTS-FAS---LP-GMWERTLTVN 297 (470)
Q Consensus 224 l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~-~~~~-~~~---~~-~~~~~~i~i~ 297 (470)
+.++++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ...+ +.. +. ...+++|+++
T Consensus 163 ~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 241 (396)
T PRK09147 163 VWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRY-GFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFH 241 (396)
T ss_pred HhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEe
Confidence 877899999999999999999999999999999999 999999999999988653 1112 111 11 1247999999
Q ss_pred ccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 012124 298 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 377 (470)
Q Consensus 298 S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 377 (470)
||||.++++|+|+||+++++++++.+.+.......+++.+.|.++.+.+.. ++++++.++.|+++++.+.+.|++.
T Consensus 242 S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~~~ 317 (396)
T PRK09147 242 SLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWND----EAHVRENRALYREKFDAVTPILAPV 317 (396)
T ss_pred ccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999899999999999999999998877666677899999998888753 6789999999999999999999874
Q ss_pred CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEEEEeecCHHH
Q 012124 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIRISYAASLTT 449 (470)
Q Consensus 378 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--------~~~iRls~~~~~~~ 449 (470)
+.+..|.+|+|+|+++| . +..+++++|++++||.+.||..|+. .+++||+++.++++
T Consensus 318 --~~~~~p~~g~f~~~~~~-~------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~ 382 (396)
T PRK09147 318 --LDVQLPDAGFYLWAKVP-G------------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAE 382 (396)
T ss_pred --cCCCCCCeeEEEEEECC-C------------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHH
Confidence 56667899999999998 2 5778888888777999999998852 46899999998899
Q ss_pred HHHHHHHHHHHHH
Q 012124 450 LQAAVERIKKGLL 462 (470)
Q Consensus 450 i~~~l~~l~~~l~ 462 (470)
+++++++|+++++
T Consensus 383 l~~~l~rl~~~~~ 395 (396)
T PRK09147 383 CVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998874
No 16
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-56 Score=445.00 Aligned_cols=375 Identities=27% Similarity=0.505 Sum_probs=325.1
Q ss_pred cccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHc
Q 012124 70 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEEN 148 (470)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~ 148 (470)
++..+.++....+.+.+......|+++++|+.|+|+.++|+.+++++.+.+.. ....|+++.|.++||+++++|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~ 90 (394)
T PRK05942 11 RLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRY 90 (394)
T ss_pred hhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHH
Confidence 34444444444444445555567888999999999987777788877776654 35789999999999999999999888
Q ss_pred CCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 149 GLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 149 g~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
|++++++ +|++|+|+++++..++.++++|||+|++++|+|+.+...+...|++++.++++.+++|.+|++.+++.++++
T Consensus 91 ~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 170 (394)
T PRK05942 91 GVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQ 170 (394)
T ss_pred CCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcccc
Confidence 9888888 589999999999999999999999999999999999999999999999999987777889999999999889
Q ss_pred ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccc
Q 012124 228 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 307 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 307 (470)
++++++++||||||.++|.+++++|+++|+++ +++||+||+|.++.|++....++.++++..+++|+++||||.||++|
T Consensus 171 ~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G 249 (394)
T PRK05942 171 AKILYFNYPSNPTTATAPREFFEEIVAFARKY-EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG 249 (394)
T ss_pred ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChh
Confidence 99999999999999999999999999999999 99999999999998876555666666543467899999999999999
Q ss_pred ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc
Q 012124 308 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 387 (470)
Q Consensus 308 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 387 (470)
+|+||+++++++++.+.........+.+.+.|.++..+|+. .++++++.++.|+++++.+.+.|++. |+.+..|.+
T Consensus 250 lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~ 325 (394)
T PRK05942 250 WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQL---PDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKA 325 (394)
T ss_pred hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCe
Confidence 99999999999999999888766778899999999999975 47899999999999999999999887 788888999
Q ss_pred eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 388 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
|+|+|+++|..+ ++.+++.++++++||.+.||..|+. ++++|++++.+.+.+.+++++|.++
T Consensus 326 ~~f~~~~~~~~~-----------~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 326 TMYLWVPCPVGM-----------GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred eeEEEEECCCCC-----------CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 999999998643 6778888777778999999999864 5799999998888999999998764
No 17
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-56 Score=443.37 Aligned_cols=377 Identities=32% Similarity=0.552 Sum_probs=332.7
Q ss_pred cccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHH
Q 012124 68 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 147 (470)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~ 147 (470)
++++.++.+....++.....+....++++++|+.|.|++++|+.+.+++.+.+......|.+..|.++||+++++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 85 (387)
T PRK08960 6 SRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQR 85 (387)
T ss_pred hhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHH
Confidence 44556666777777777777666778899999999999888999999999988766678989999999999999999988
Q ss_pred cCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 148 ~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
+|+.+++++|++|+|++++|..++.++++|||+|++++|+|+.+...++..|.+++.++++.++++.+|++.+++.++++
T Consensus 86 ~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 165 (387)
T PRK08960 86 YGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNAD 165 (387)
T ss_pred hCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCcc
Confidence 89999999999999999999999999999999999999999999999999999999999987777889999999999888
Q ss_pred ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccc
Q 012124 228 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 307 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 307 (470)
++++++++||||||.++|.+++++|+++|++| |++||+||+|.++.|++. ..++..+ .+++|+++||||.+|++|
T Consensus 166 ~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~Y~~~~~~~~-~~~~~~~---~~~vi~~~S~SK~~g~~G 240 (387)
T PRK08960 166 TVGALVASPANPTGTLLSRDELAALSQALRAR-GGHLVVDEIYHGLTYGVD-AASVLEV---DDDAFVLNSFSKYFGMTG 240 (387)
T ss_pred ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEEEccccccccCCC-CCChhhc---cCCEEEEeecccccCCcc
Confidence 99999999999999999999999999999999 999999999999888642 3344333 468999999999999999
Q ss_pred ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-cCCC
Q 012124 308 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQ 386 (470)
Q Consensus 308 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~ 386 (470)
+|+||+++++++++.+.+.......+++.+.|.++..++.+. ...++++.++.|+++++.+.+.|+++ |+.+ ..|.
T Consensus 241 lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~ 317 (387)
T PRK08960 241 WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPE--TLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQ 317 (387)
T ss_pred cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC--cHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCC
Confidence 999999999999999998888778889999999999998752 26889999999999999999999987 6654 4688
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+|+|+|+++++.. .++.+++++|++++||.+.||..|+. ++++|++++.+.+++++++++|.++++
T Consensus 318 g~~f~~~~~~~~~----------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFG----------GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccC----------CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999999998520 16788988888777999999999975 369999999988999999999998775
No 18
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.3e-56 Score=459.22 Aligned_cols=388 Identities=25% Similarity=0.424 Sum_probs=325.7
Q ss_pred CccccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHH
Q 012124 66 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICH 142 (470)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~ 142 (470)
..+.++.++..+....+...+......|+++|+|+.|+| ++++|+.+++++.+++.. ...|++..|.++||++|++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~ 196 (517)
T PRK13355 118 KKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQ 196 (517)
T ss_pred ChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHH
Confidence 356666677777776677777878888999999999999 566788999999888764 5679999999999999999
Q ss_pred HHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhh
Q 012124 143 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 222 (470)
Q Consensus 143 ~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 222 (470)
|+.++.+..+++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++++.+++|.+|++.+++
T Consensus 197 ~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~ 276 (517)
T PRK13355 197 YAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRS 276 (517)
T ss_pred HHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHH
Confidence 99876555689999999999999999999999999999999999999999999999999999999877789999999999
Q ss_pred hccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcc
Q 012124 223 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 223 ~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
++++++++|++++||||||.+++.+++++|+++|++| +++||+||+|.+|.|++....++..+.+ ...+++++||||.
T Consensus 277 ~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~-~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~SK~ 354 (517)
T PRK13355 277 KITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREH-QLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGLSKS 354 (517)
T ss_pred hcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecchhh
Confidence 9998999999999999999999999999999999999 9999999999999998655667766654 3468889999999
Q ss_pred cccccceeeEEEcC--HHH----HHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 012124 303 FAMTGWRLGYIAGP--KHF----VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 376 (470)
Q Consensus 303 ~~~~G~r~G~~~~~--~~~----~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 376 (470)
|+++|+|+||++++ +++ ++.+... .....+.+.+.|.++..+|.......+++.+.++.+ ++++++.+.|++
T Consensus 355 ~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~-~~r~~l~~~L~~ 432 (517)
T PRK13355 355 HMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVY-EQRELVYNALNA 432 (517)
T ss_pred ccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 99999999999954 443 4444333 234457889999999999964221256666655554 567999999999
Q ss_pred CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHH
Q 012124 377 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAV 454 (470)
Q Consensus 377 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--~~~~iRls~~~~~~~i~~~l 454 (470)
++|+++..|+++||+|++++... .+..++.+++..++++.||.+.||..|+ .+++|||+++.++++|++++
T Consensus 433 ~~g~~~~~p~g~fy~~~~l~~~~-------~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~ 505 (517)
T PRK13355 433 IPGISAVKPKAAFYIFPKIDVKK-------FNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAM 505 (517)
T ss_pred CCCcccCCCCeeeEEEeecCccc-------CCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHH
Confidence 88999999999999999986420 0011466777777777899999999997 36899999988999999999
Q ss_pred HHHHHHHHhhC
Q 012124 455 ERIKKGLLTLR 465 (470)
Q Consensus 455 ~~l~~~l~~~~ 465 (470)
++|+++++.++
T Consensus 506 ~rl~~~~~~~~ 516 (517)
T PRK13355 506 DRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHhh
Confidence 99999998654
No 19
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=3.6e-56 Score=443.55 Aligned_cols=381 Identities=27% Similarity=0.442 Sum_probs=325.3
Q ss_pred ccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcC
Q 012124 71 VNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENG 149 (470)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g 149 (470)
+..+..+....+..........|+++|+|+.|+|++.+++.+++++.+.+.. ....|+++.|.++||+++++++.+.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g 86 (405)
T PRK09148 7 IRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFG 86 (405)
T ss_pred hhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3344445555555555556667889999999999988888888888887754 357899999999999999999998889
Q ss_pred CCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCc
Q 012124 150 LSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS 228 (470)
Q Consensus 150 ~~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 228 (470)
+.++++ +|++|+|++++|.+++..++++||+|++++|+|+.+...++..|++++.++++.++++..+++.+.+...+++
T Consensus 87 ~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~ 166 (405)
T PRK09148 87 VKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKP 166 (405)
T ss_pred CCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccc
Confidence 888887 8999999999999999999999999999999999999999999999999999766655445555544445688
Q ss_pred eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccc
Q 012124 229 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 229 ~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
+++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++...+++..++...+++|+++||||.+|+||+
T Consensus 167 ~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 167 IALIVNYPSNPTAYVADLDFYKDVVAFAKKH-DIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 9999999999999999999999999999999 999999999999988765455566665445678999999999999999
Q ss_pred eeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCce
Q 012124 309 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 388 (470)
Q Consensus 309 r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g 388 (470)
|+||+++++++++.+.+.+.....+++.+.|.++..+|.+ .+.++++.++.|+++++.+.+.|+++ |+.+..|.+|
T Consensus 246 R~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~---~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g 321 (405)
T PRK09148 246 RMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG---PQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAAS 321 (405)
T ss_pred heeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCee
Confidence 9999999999999999988877778899999999999975 36889999999999999999999987 7877788999
Q ss_pred EEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
+|+|+++|.... ..+..++++.|+++.||.+.||..|+. ++++||+++.+.+++.+++++|.+++++.
T Consensus 322 ~f~~~~l~~~~~--------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 322 MFAWAPIPEAFR--------HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred EEEEEECCCccC--------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999986421 013578888888777999999999975 47999999888899999999999998754
No 20
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=7.4e-57 Score=457.30 Aligned_cols=396 Identities=22% Similarity=0.364 Sum_probs=322.9
Q ss_pred ccccccccCCchHHHHHHHHHHHHh---------cCCCeEEccCCCCC----------------CCC-------------
Q 012124 67 LSPRVNAVKPSKTVAITDQATALAQ---------AGVSVIRLAAGEPD----------------FDT------------- 108 (470)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~g~~~----------------~~~------------- 108 (470)
+++++..++++....+..++.++.+ +|.++|+|+.|+|+ +.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~ 89 (481)
T PTZ00377 10 INPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLF 89 (481)
T ss_pred cCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccC
Confidence 5666777777766666666666655 45799999999996 665
Q ss_pred hHHHHHHHHHHHHc---CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEc
Q 012124 109 PVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIP 184 (470)
Q Consensus 109 ~~~~~~a~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~ 184 (470)
|..+++++.+.+.. ....|+++.|.++||++|++++.+.+|+++++++|++|+|+++++.+++++++ +|||+|+++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~ 169 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIP 169 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEEC
Confidence 34777777766654 35679999999999999999999989999999999999999999999999998 799999999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 012124 185 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 258 (470)
Q Consensus 185 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~ 258 (470)
+|+|+.|...++..|++++.++++.+++|.+|++.|++++++ ++|++++++||||||.++|.+++++|+++|++
T Consensus 170 ~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 170 IPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred CCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998778899999999999864 78999999999999999999999999999999
Q ss_pred CCCEEEEEeccccccccCC-CCcccccc----cCCC---CCceEEEeccCcc-cccccceeeEEEc---CHHHHHHHHHH
Q 012124 259 HPRLLVLSDEIYEHIIYAP-ATHTSFAS----LPGM---WERTLTVNGFSKA-FAMTGWRLGYIAG---PKHFVAACNKI 326 (470)
Q Consensus 259 ~~~~~iI~Dd~~~~~~~~~-~~~~~~~~----~~~~---~~~~i~i~S~sK~-~~~~G~r~G~~~~---~~~~~~~l~~~ 326 (470)
| +++||+||+|.++.|++ ....++.. ++.. ..++|+++||||. +++||+|+||+++ |+++++.+.+.
T Consensus 250 ~-~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~ 328 (481)
T PTZ00377 250 K-GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL 328 (481)
T ss_pred C-CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH
Confidence 9 99999999999999853 23344432 3321 1379999999997 5899999999986 99999999887
Q ss_pred hhhccCCCChHHHHHHHHHHhcCCCC----hHH---HHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeecc--C
Q 012124 327 QSQFTSGASSISQKAGVAALGLGYAG----GEV---VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS--T 397 (470)
Q Consensus 327 ~~~~~~~~~~~~q~a~~~~l~~~~~~----~~~---~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~--~ 397 (470)
.. ...+++.+.|.++..+++..... +.+ ++++++.|+++++.+.+.|++++|+.+..|++|||+|++++ .
T Consensus 329 ~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~ 407 (481)
T PTZ00377 329 AS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPE 407 (481)
T ss_pred hh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCch
Confidence 75 34578999999999999642110 223 44555568999999999999988999999999999997763 2
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
........ .+..++..++..++++.||.+.||+.|+. ++++|||++.+++++++++++|++++++..
T Consensus 408 ~~~~~~~~-~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 408 KAIQEAKE-RGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred hhHHHHHh-cCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 11000000 00113455667778788999999999974 359999999888899999999999988754
No 21
>PLN02187 rooty/superroot1
Probab=100.00 E-value=6.5e-56 Score=446.15 Aligned_cols=365 Identities=23% Similarity=0.408 Sum_probs=314.1
Q ss_pred cCCCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 92 AGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 92 ~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
.++++|+|+.|+|+ +.+++.+.+++.+++..+ ...|++..|.++||++|++|+.+.+|..+++++|++|+|++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 46689999999998 455788999999888754 4679999999999999999999888988999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCH
Q 012124 167 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246 (470)
Q Consensus 167 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~ 246 (470)
|.+++.++++|||+|++++|+|+.|...++..|++++.+++.++++|++|++.|+++++++++++++++||||||.+++.
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~ 223 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSH 223 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCH
Confidence 99999999999999999999999999999999999999999766789999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC--HH---HHH
Q 012124 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP--KH---FVA 321 (470)
Q Consensus 247 ~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~--~~---~~~ 321 (470)
+++++|+++|++| +++||+||+|.++.|++....++..++. ..++|+++||||.|++||+|+||++++ .. +++
T Consensus 224 e~l~~i~~~a~~~-~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~ 301 (462)
T PLN02187 224 DHLKKVAETARKL-GIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTK 301 (462)
T ss_pred HHHHHHHHHHHHC-CCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEecCchhHHHHHH
Confidence 9999999999999 9999999999999987655556666654 367999999999999999999999984 33 345
Q ss_pred HHHHHhhhccC--CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCc
Q 012124 322 ACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTY 398 (470)
Q Consensus 322 ~l~~~~~~~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~ 398 (470)
.+...+..... +++.+.|.++.++|+++ .++|+++.++.++++++.+.+.|+++++.. +..|.+|+|+|++++..
T Consensus 302 ~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~--~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~ 379 (462)
T PLN02187 302 VLQSIKQNLDVTPDPATIIQAALPAILEKA--DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELS 379 (462)
T ss_pred HHHHHHHhccccCCCCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChh
Confidence 66666665544 45899999999999752 268999999999999999999999885544 34688999999987531
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~ 466 (470)
.. .+..++.+++.+++++.||.+.||..|+.+++|||+|+.+++.+++++++|+++++++..
T Consensus 380 ~~------~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 380 LM------DNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred hC------CCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 00 001145677777877789999999999888999999999999999999999999987654
No 22
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=6.6e-56 Score=439.06 Aligned_cols=355 Identities=45% Similarity=0.733 Sum_probs=317.5
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVL 172 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al~~~~~ 172 (470)
+++|+|+.|+|++.+++.+.+++.+.+......|++..|.++||+++++++.+.+|+.++++ +|++|+|+++++.+++.
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46899999999988888888888888776667898899999999999999999889888886 89999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
++++|||+|++++|+|+.+...++..|.+++.++++.++++++|++.++++++++++++++++||||||.++|.+++++|
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l 179 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEI 179 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHH
Confidence 99999999999999999999999999999999998766678899999999998899999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+++|++| +++||+||+|.++.|++. ..++..+++..+++++++||||.|++||+|+||+++++++++.+.........
T Consensus 180 ~~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~ 257 (378)
T PRK07682 180 AVIVEKH-DLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMM 257 (378)
T ss_pred HHHHHHc-CcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhcc
Confidence 9999999 999999999999998753 33445555445789999999999999999999999999999999887766667
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC-ccCCcccCCCCCCC
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST-YYGSEAEGFGKIEN 411 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~ 411 (470)
+++.+.|.++..+|+++ +.+++++++.|+++++.+.+.|+++ |+.+..|++|||+|+.++. .+ +
T Consensus 258 ~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~~-----------~ 322 (378)
T PRK07682 258 CAPTMAQFAALEALRAG---NDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTGL-----------S 322 (378)
T ss_pred CCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCCC-----------C
Confidence 78999999999999873 5678999999999999999999998 8888889999999998853 22 6
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
+.++++.|++++||.+.||..|+. ++++||+++.+++++++++++|++++++++
T Consensus 323 ~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~ 378 (378)
T PRK07682 323 SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhcC
Confidence 788998888667999999999975 579999999988999999999999998754
No 23
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-55 Score=441.27 Aligned_cols=363 Identities=23% Similarity=0.429 Sum_probs=315.9
Q ss_pred CCCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 93 GVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 93 ~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
++++|+|+.|+|+ +++++.+.+++.+++..+ ...|++..|.++||+++++++.+.+|..+++++|++|+|++++|
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 7799999999986 667889999999988764 45898899999999999999998889889999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHH
Q 012124 168 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 247 (470)
Q Consensus 168 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~ 247 (470)
.+++..+.+|||+|++++|+|+.|.......|++++.+++.++++|.+|++.++++++++++++++++||||||.+++.+
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~ 210 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYE 210 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999987777899999999999998999999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEc--CHHHHH----
Q 012124 248 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFVA---- 321 (470)
Q Consensus 248 ~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~--~~~~~~---- 321 (470)
++++|+++|+++ |++||+||+|.++.|++....++..++. .+++|+++||||.|++||+|+||+++ |..+++
T Consensus 211 ~l~~i~~~a~~~-~i~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~ 288 (430)
T PLN00145 211 HLAKIAETARKL-GILVIADEVYDHLTFGSKPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKV 288 (430)
T ss_pred HHHHHHHHHHHc-CCEEEEeccchhhccCCCCccchhhhcc-cCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHH
Confidence 999999999999 9999999999999987655566666654 57899999999999999999999997 444443
Q ss_pred --HHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-cCCCceEEEeeeccCc
Q 012124 322 --ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTY 398 (470)
Q Consensus 322 --~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~ 398 (470)
.+.... ....+++.+.|.++..+|+.+ .+.++++.++.++++++.+.+.|++++|+.+ ..|+++||+|++++..
T Consensus 289 ~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~ 365 (430)
T PLN00145 289 VDSIRNYL-NISTDPATFVQGAIPQIIANT--KEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLS 365 (430)
T ss_pred HHHHHHHh-cccCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChh
Confidence 333333 234457889999999999853 2688999999999999999999999888875 4799999999998742
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~ 466 (470)
. ..+..++.+++.+|++++||.+.||..|+.++|+||+|+.+++++++++++|++++.+.+.
T Consensus 366 ~------~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 366 C------LSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred h------cCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence 0 0001156778888888889999999999989999999999889999999999999987764
No 24
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=8.2e-56 Score=441.25 Aligned_cols=366 Identities=22% Similarity=0.389 Sum_probs=311.9
Q ss_pred hcCCCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 91 QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
..++++|+|+.|+|+ +++|+.+.+++.+++... ...|++..|.++||++|++++.+.+|+.+++++|++|+|+++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~ 108 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH 108 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence 357799999999998 888999999999988764 567999999999999999999988898899999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCC
Q 012124 166 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 166 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s 245 (470)
++.+++.+++++||.|++++|+|+.+...++..|++++.++++.++++.+|++.|+++++++++++++++||||||.++|
T Consensus 109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccC
Confidence 99999999999999999999999999999999999999999876667889999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEc--CHHHH---
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFV--- 320 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~--~~~~~--- 320 (470)
.+++++|+++|++| +++||+||+|.++.|++....++..++. .+++|+++||||.|++||+|+||+++ ++.++
T Consensus 189 ~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~ 266 (409)
T PLN00143 189 YEHLNKIAETARKL-GILVIADEVYGHIVFGSKPFVPMGLFAS-IVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQIC 266 (409)
T ss_pred HHHHHHHHHHHHHc-CCeEEEEccccccccCCCCCcchhhhcc-cCcEEEEccchhhcCCCccceEEEEeeCchhhhhhH
Confidence 99999999999999 9999999999999987644445555544 46899999999999999999999998 33343
Q ss_pred ---HHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeecc
Q 012124 321 ---AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFS 396 (470)
Q Consensus 321 ---~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~ 396 (470)
+.+.+.... ...++.+.|.++..+|+++ ...++++.++.++++++.+.+.|.++++.. +..|++|+|+|++++
T Consensus 267 ~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~ 343 (409)
T PLN00143 267 EIADSIKKALNP-APFPPTFIQAAIPEILEKT--TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN 343 (409)
T ss_pred HHHHHHHHHHhc-cCCCCchHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc
Confidence 333333332 3345889999999999753 267889999999999999999998875443 346889999999997
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCCC
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 467 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~~ 467 (470)
.... .+..++.+++.+++++.||.+.||..|+.++++||+++.++++++++++||+++++++.+.
T Consensus 344 ~~~~------~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 344 LLLL------EDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred hhhc------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 4200 0011467787777777799999999998889999999998999999999999999877653
No 25
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-55 Score=436.90 Aligned_cols=355 Identities=40% Similarity=0.659 Sum_probs=320.9
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.++|+|+.|+|++++++.+.+++.+.+......|.+..|.++||+++++++.+.+|..+++++|++|+|+++++.+++.+
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES 112 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence 46899999999998888999999998877677898999999999999999998889889999999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
++++||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++.++++++++++++||||||.++|.+++++|+
T Consensus 113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~ 192 (391)
T PRK08361 113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIA 192 (391)
T ss_pred hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 99999999999999999999999999999999998777788999999999998999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
++|+++ +++||+||+|.++.|++....++..++ .+++++++||||.+|++|+|+||+++++++++.+.........+
T Consensus 193 ~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
T PRK08361 193 DIAEDY-NIYILSDEPYEHFLYEGAKHYPMIKYA--PDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGN 269 (391)
T ss_pred HHHHHc-CeEEEEEcccccceeCCCCCCCHhhcC--CCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccC
Confidence 999999 999999999999988654445555554 36899999999999999999999999999999988877666678
Q ss_pred CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC-ccCCcccCCCCCCCH
Q 012124 334 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST-YYGSEAEGFGKIENS 412 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~ 412 (470)
.+.+.|.++..+|.++.. .+++++.++.++++++.+.+.|++++|+.+..|++|+|+|+++++ .+ +.
T Consensus 270 ~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~-----------~~ 337 (391)
T PRK08361 270 VASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGM-----------SS 337 (391)
T ss_pred CChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCC-----------CH
Confidence 899999999999987654 578999999999999999999999888999999999999999974 22 67
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
.++++.|++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 338 ~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 338 EDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 88998888777999999999875 4799999999888999999999998875
No 26
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.1e-55 Score=438.60 Aligned_cols=365 Identities=24% Similarity=0.425 Sum_probs=317.1
Q ss_pred hcCCCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 91 QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
..|+++|+|+.|+|+ +++|+.+.+++.+++... ...|++..|.++||+++++++.+.+|..+++++|++|+|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 467899999999998 777899999999988764 578999999999999999999988898899999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCC
Q 012124 166 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 166 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s 245 (470)
++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++.+|++.++++++++++++++++||||||.++|
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCC
Confidence 99999999999999999999999999989999999999999976667889999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC--------H
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP--------K 317 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~--------~ 317 (470)
.+++++|+++|+++ +++||+||+|.++.|++....++..++. .+++|+++||||.|++||+|+||++++ +
T Consensus 188 ~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~ 265 (409)
T PLN02656 188 YQHLKKIAETAEKL-KILVIADEVYGHLAFGSNPFVPMGVFGS-IVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDP 265 (409)
T ss_pred HHHHHHHHHHHHHc-CCEEEEehhhhhcccCCCCcccHHHhcc-cCcEEEEcccchhccCcceeEEEEEEeCcccccccH
Confidence 99999999999999 9999999999999987654455555544 578999999999998999999999984 5
Q ss_pred HHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeecc
Q 012124 318 HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFS 396 (470)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~ 396 (470)
++++.+.+.... ..+++.+.|.++..+|+++ .+.++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++
T Consensus 266 ~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~ 342 (409)
T PLN02656 266 KIVERIKKYFDI-LGGPATFIQAAVPTILEQT--DESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLN 342 (409)
T ss_pred HHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecc
Confidence 788888876554 3467899999999999853 267899999999999999999999876554 357899999999986
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~ 466 (470)
...- ....++.+++..++++.||.+.||+.|+.++++||+++.+++++++++++|++++.+...
T Consensus 343 ~~~~------~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 343 LSLL------EDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred hhhc------CCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence 3200 000135566666666779999999999888999999999999999999999999987654
No 27
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.4e-55 Score=434.54 Aligned_cols=380 Identities=35% Similarity=0.584 Sum_probs=325.9
Q ss_pred cccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHH
Q 012124 68 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 147 (470)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~ 147 (470)
++++..........+.....+....++++++|+.|.|++++++.+.+++.+.+......|++..|.++||+++++|+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 83 (388)
T PRK07337 4 AARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARR 83 (388)
T ss_pred hhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 34444445555555555666666677889999999999888888999999888766788988999999999999999988
Q ss_pred cCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 148 ~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
+|+.+++++|++|+|+++++.+++.+++++||+|++++|+|+.+...++..|++++.+|++.++++.+|++.+++.++++
T Consensus 84 ~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 163 (388)
T PRK07337 84 FGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGER 163 (388)
T ss_pred hCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCcc
Confidence 89889999999999999999999999999999999999999999999999999999999986667889999999999889
Q ss_pred ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccc
Q 012124 228 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 307 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 307 (470)
+++|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|.+. ..+...+ .+++|+++||||.+|++|
T Consensus 164 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~-~~~~~~~---~~~vi~~~S~SK~~~~~G 238 (388)
T PRK07337 164 TRGVLLASPSNPTGTSIAPDELRRIVEAVRAR-GGFTIVDEIYQGLSYDAA-PVSALSL---GDDVITINSFSKYFNMTG 238 (388)
T ss_pred ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHC-CCEEEEeccccccccCCC-CcChhhc---cCCEEEEEechhhcCCch
Confidence 99999999999999999999999999999999 999999999999887653 2233332 467999999999999999
Q ss_pred ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-cCCC
Q 012124 308 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQ 386 (470)
Q Consensus 308 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~ 386 (470)
+|+||+++++++++.+.........+.+.+.|.++..++.++. ..+.++.++.|+++++.+.+.|+++ |+.+ ..|.
T Consensus 239 ~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~ 315 (388)
T PRK07337 239 WRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDT--LAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPD 315 (388)
T ss_pred hheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc--hHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCC
Confidence 9999999999999999988877777889999999999997543 3456888999999999999999987 6654 4688
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
+|+|+|+++++... .+..++.+++++|++++||.+.||..|+. ++++||+++.+++++++++++|.+++
T Consensus 316 ~g~f~~~~~~~~~~------~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 316 GAFYVYADCRGVAH------PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred eeEEEEEecccccC------CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 99999999975200 00116778888888778999999999975 47999999998899999999998865
No 28
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-55 Score=434.13 Aligned_cols=374 Identities=28% Similarity=0.442 Sum_probs=320.1
Q ss_pred hHHHHHHHHHHHHh--cCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCC-CC
Q 012124 78 KTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLS-YT 153 (470)
Q Consensus 78 ~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~-~~ 153 (470)
+...+....+.+.. ++.++|+|+.|+|++.+++.+++++.+.+.. ....|+ ..|.++||+++++|+.+.+|+. ++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~ 104 (410)
T PRK06290 26 KFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDID 104 (410)
T ss_pred HHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCC
Confidence 33334333344432 4667999999999999988899988887654 345685 5899999999999999888987 88
Q ss_pred CC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEE
Q 012124 154 PD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 232 (470)
Q Consensus 154 ~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~ 232 (470)
++ +|++|+|++++|..++.+++++||.|++++|+|+.+...++..|++++.++++.++++.+|++.+++.+.+++++|+
T Consensus 105 ~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~ 184 (410)
T PRK06290 105 PVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLY 184 (410)
T ss_pred CcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEE
Confidence 86 79999999999999999999999999999999999999999999999999998777788999999999988899999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE
Q 012124 233 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312 (470)
Q Consensus 233 l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~ 312 (470)
+++||||||.++|.+++++|+++|++| +++||+||+|.++.|++ ...++..++...+++|+++||||.+|+||+|+||
T Consensus 185 l~nP~NPTG~v~s~e~l~~l~~la~~~-~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 185 LNYPNNPTGAVATKEFYEEVVDFAKEN-NIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEe
Confidence 999999999999999999999999999 99999999999998865 2345555554457889999999999999999999
Q ss_pred EEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEe
Q 012124 313 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 392 (470)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~ 392 (470)
+++++++++.+.........+++.+.|.++..+|++ .+++++.++.|+++++.+.+.|+++ |+.+.+|++|||+|
T Consensus 263 ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~ 337 (410)
T PRK06290 263 VVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH----PEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLY 337 (410)
T ss_pred EEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC----cHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEE
Confidence 999999999999888877777888999999999986 4688899999999999999999988 88888899999999
Q ss_pred eeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhC
Q 012124 393 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~l~~~~ 465 (470)
+++|+.... +. +..++.++++.|+++++|.+.||..|+ +++||+++. ++++.++.++.|++.+.++.
T Consensus 338 v~lp~~~~~---~~-~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 338 VKAPKGTKS---GI-KFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred EECCCcccc---CC-CCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 999864200 00 002578899999998888889988664 799999995 77889999999998887654
No 29
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-56 Score=413.46 Aligned_cols=358 Identities=40% Similarity=0.688 Sum_probs=320.2
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHHHHHHHHhcC
Q 012124 99 LAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAVLAVCS 176 (470)
Q Consensus 99 l~~g~~~~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al~~~~~~l~~ 176 (470)
|+.|.|+.++|+.+.+++.+++.+. .++|++..|.++|+++|++.++..+|....+ ++|+||+|+.++|..++..+++
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 9999999999999999999999884 7899999999999999999999988876666 5799999999999999999999
Q ss_pred CCCeEEEcCCCCCChHHHHHHcCCEEEEecCc------CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 177 PGDEVIIPAPFWVSYPEMARIADATPVILPTR------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 177 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~------~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+||+|+|.+|.|..|...++.+|..++.++.. ..++|.+|.+.++.++++++|+|++|+||||||.++|.++++
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe 195 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELE 195 (420)
T ss_pred CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHH
Confidence 99999999999999999999999999999998 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++|++| |++||.||+|..+.|++..+..+.+++++++++|.++||||++|+.|||+||+++|+.++..+..+....
T Consensus 196 ~ia~l~~k~-~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~ 274 (420)
T KOG0257|consen 196 RIAELCKKH-GLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF 274 (420)
T ss_pred HHHHHHHHC-CEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence 999999999 9999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHhcCCC----C-hHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCcc-CCccc
Q 012124 331 TSGASSISQKAGVAALGLGYA----G-GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAE 404 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~----~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~ 404 (470)
.+.+++..|.|.+.++..+.. . ..+..++.+.|+++|+.|.+.|.++ |+++..|++++|+|++++... .+-.+
T Consensus 275 ~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~ 353 (420)
T KOG0257|consen 275 VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFE 353 (420)
T ss_pred ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcch
Confidence 999999999999988876431 0 1456679999999999999999999 999999999999999998110 00001
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC-------CcEEEEeecCHHHHHHHHHHHH
Q 012124 405 GFGKIENSESLCRYLLDKAQVALVPGDAFGDD-------TCIRISYAASLTTLQAAVERIK 458 (470)
Q Consensus 405 ~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~-------~~iRls~~~~~~~i~~~l~~l~ 458 (470)
......++..++..++++.|+.+.|++.|+.+ +.+|+++..+++.++.++++|+
T Consensus 354 ~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 354 EILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred hhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 11111245678899999999999999999965 3677888888899999999988
No 30
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.6e-55 Score=435.67 Aligned_cols=367 Identities=26% Similarity=0.454 Sum_probs=315.3
Q ss_pred ccCCchHHHHHHHHHHHH-hcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCC
Q 012124 73 AVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS 151 (470)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~ 151 (470)
..+.+....+...+.+.. ..|+++++|+.|+|++.+|+.+.+++.+.+. ....|+++.|.++||+++++|+.+.+|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 84 (393)
T TIGR03538 6 RLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLP 84 (393)
T ss_pred hCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCc
Confidence 344445555555554443 3678999999999999999999999998775 57889999999999999999999888876
Q ss_pred --CCCC-cEEEecChHHHHHHHHHHhcCCCCe--EEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 152 --YTPD-QILVSNGAKQSILQAVLAVCSPGDE--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 152 --~~~~-~i~it~g~~~al~~~~~~l~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
++++ +|++|+|+++++.+++.++++|||. |++++|+|+.|...++..|++++.++++.++++.+|++.+++++.+
T Consensus 85 ~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~ 164 (393)
T TIGR03538 85 TGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR 164 (393)
T ss_pred ccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh
Confidence 6775 8999999999999999999999986 9999999999999999999999999998777788999999998877
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC-Ccccc-cc---cC-CCCCceEEEeccC
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSF-AS---LP-GMWERTLTVNGFS 300 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~-~~~~~-~~---~~-~~~~~~i~i~S~s 300 (470)
++|++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ...++ .. .. ...+++|+++|||
T Consensus 165 ~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 243 (393)
T TIGR03538 165 RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQY-GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLS 243 (393)
T ss_pred cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecch
Confidence 899999999999999999999999999999999 999999999999887642 22222 11 11 1257899999999
Q ss_pred cccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 301 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 301 K~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
|.++++|+|+||+++++++++.+.+.......+.+.+.|.++...+.. ++++++.++.|+++++.+.+.|++. +
T Consensus 244 K~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~--~ 317 (393)
T TIGR03538 244 KRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWND----EQHVRENRALYREKFAAVLEILGQV--L 317 (393)
T ss_pred hhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHhh--C
Confidence 999899999999999999999998887766677899999998888863 6789999999999999999999875 4
Q ss_pred eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEEEEeecCHHHHHH
Q 012124 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIRISYAASLTTLQA 452 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--------~~~iRls~~~~~~~i~~ 452 (470)
.+..|.+|+|+|+++| . +..++++.|++++||.+.||..|+. .+++||+++.+++++++
T Consensus 318 ~~~~p~gg~f~~~~~~-~------------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~ 384 (393)
T TIGR03538 318 DLELPDAGFYLWPKVP-G------------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVE 384 (393)
T ss_pred cccCCCeeEEEEEECC-C------------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHH
Confidence 5567899999999998 2 5678998888777999999998852 36899999998899999
Q ss_pred HHHHHHHH
Q 012124 453 AVERIKKG 460 (470)
Q Consensus 453 ~l~~l~~~ 460 (470)
++++|+++
T Consensus 385 ~l~~l~~~ 392 (393)
T TIGR03538 385 AAERIRSF 392 (393)
T ss_pred HHHHHHHh
Confidence 99999875
No 31
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4e-55 Score=437.25 Aligned_cols=364 Identities=26% Similarity=0.454 Sum_probs=315.8
Q ss_pred hcCCCeEEccCCCCC----CCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHc------CCCCCCCcEEE
Q 012124 91 QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEEN------GLSYTPDQILV 159 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~------g~~~~~~~i~i 159 (470)
..++++|+|+.|.|+ +.+++.+.+++.+.+.. ....|+++.|.++||++|++|+.+.+ |..+++++|++
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i 109 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL 109 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence 367799999999997 45688899999888775 35789889999999999999998754 46688999999
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCC
Q 012124 160 SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 239 (470)
Q Consensus 160 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nP 239 (470)
|+|+++++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++++|++.+++++++++++|++++||||
T Consensus 110 t~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NP 189 (412)
T PTZ00433 110 CSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNP 189 (412)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999987667889999999999889999999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEc--C-
Q 012124 240 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--P- 316 (470)
Q Consensus 240 tG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~--~- 316 (470)
||.+++.+++++|+++|+++ |++||+||+|.++.|++...+++..++. ..++|+++||||.+|+||+|+||+++ |
T Consensus 190 tG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~ 267 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEEL-RLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLVVPGWRLGWLLLVDPH 267 (412)
T ss_pred CCcccCHHHHHHHHHHHHHc-CCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcCCCCeeEEEEEEeCCc
Confidence 99999999999999999999 9999999999999887654456666654 34689999999999889999999997 3
Q ss_pred ---HHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEee
Q 012124 317 ---KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI 393 (470)
Q Consensus 317 ---~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~ 393 (470)
+++++.+.+... ...+++.+.|.++..++.++ .+.|+++.++.++++++.+.+.|++..|+.+..|++|+|+|+
T Consensus 268 ~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~ 344 (412)
T PTZ00433 268 GNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT--PQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMS 344 (412)
T ss_pred ccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEE
Confidence 457777766543 33578999999999999763 278999999999999999999999866888888999999999
Q ss_pred eccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 394 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
+++... ..+..+..++++.|++++||.+.||..|+.++++||+++..++++++++++|++++++.+
T Consensus 345 ~l~~~~------~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 345 RLDLEK------FRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred Eechhh------cCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 987410 000014678999988767999999999988899999999988999999999999998765
No 32
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-54 Score=431.71 Aligned_cols=355 Identities=34% Similarity=0.556 Sum_probs=318.1
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 172 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~ 172 (470)
.+++|+|+.|+|++++++.+.+++.+.+.+....|+++.|.++||+++++++.+.+|+.+++++|++|+|+++++..++.
T Consensus 23 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~ 102 (382)
T PRK06108 23 REGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQ 102 (382)
T ss_pred cCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHH
Confidence 34689999999999989999999999887766779999999999999999999888988899999999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCC-CCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
.++++||+|++++|+|+.+...++..|++++.+|++.+ ++|.+|++.+++.++++++++++++||||||.++|.+++++
T Consensus 103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~ 182 (382)
T PRK06108 103 ALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRA 182 (382)
T ss_pred HhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999999753 46779999999999888999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccC-CCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
|+++|+++ +++||+||+|.++.++ +...+++..+....+++++++||||.+|++|+|+||+++++++++.+.......
T Consensus 183 l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~ 261 (382)
T PRK06108 183 ILAHCRRH-GLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYN 261 (382)
T ss_pred HHHHHHHC-CcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhc
Confidence 99999999 9999999999999886 333444455544357899999999999989999999999999999998877666
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
..+++.+.|.++..+|.+ ..+++++++++++++++.+.+.|++++|+.+..|++|+|+|+++++..
T Consensus 262 ~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~----------- 327 (382)
T PRK06108 262 TSCVAQFVQRAAVAALDE---GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVT----------- 327 (382)
T ss_pred ccCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCC-----------
Confidence 677899999999999986 367889999999999999999999888899888999999999998642
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+..+++++|++++||.+.||..|+. ++++|++++.+++++++++++|+++++
T Consensus 328 ~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 328 DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 6778999888778999999998864 579999999999999999999998875
No 33
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-55 Score=432.40 Aligned_cols=356 Identities=28% Similarity=0.514 Sum_probs=315.6
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVL 172 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al~~~~~ 172 (470)
.+.++|+.|.|+.+.|+.+++++.+.+......|+++.|.++||+++++++.+.+|+.++++ +|++|+|+++++.+++.
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 105 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL 105 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence 46899999999988788888888888766678899999999999999999998889988998 99999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
.++++||+|++++|+|+.+...++..|++++.++++. +++++|++.+++.++++++++++++||||||.++|.+++++|
T Consensus 106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i 184 (387)
T PRK08912 106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALL 184 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHH
Confidence 9999999999999999999999999999999999864 357799999999998899999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+++|++| +++||+||+|.++.|++....++..+++..+++|+++||||.+|++|+|+||+++++++++.+........+
T Consensus 185 ~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~ 263 (387)
T PRK08912 185 AEFCQRH-DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTF 263 (387)
T ss_pred HHHHHHC-CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhccc
Confidence 9999999 999999999999988764455665555445789999999999999999999999999999999888776667
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.++..|.++..++.. ..+++++.++.++++++.+.+.|++. |+.+.++.+|||+|+++++.- ...+.
T Consensus 264 ~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~--------~~~~~ 331 (387)
T PRK08912 264 TTPPNLQAAVAYGLGK---PDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLG--------LAEDD 331 (387)
T ss_pred cCChHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccC--------CCCCH
Confidence 7888889999888864 36888999999999999999999988 888888999999999997510 00167
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~----~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
.++++.|++++||.+.||..|+. .+++||+|+.+++++++++++|++++++
T Consensus 332 ~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 332 VAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred HHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 88999888777999999999853 4799999999889999999999998763
No 34
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=5e-55 Score=436.46 Aligned_cols=360 Identities=28% Similarity=0.405 Sum_probs=303.3
Q ss_pred HHHHHHHHHHHHhc--CCCeEEccCCCCCCCChHHHHHHHHHHHHc-----CCCCCCCCcCcHHHHHHHHHHHHHHcCCC
Q 012124 79 TVAITDQATALAQA--GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-----GFTRYTPNAGTLELRSAICHKLKEENGLS 151 (470)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-----~~~~y~~~~g~~~lr~~ia~~l~~~~g~~ 151 (470)
..++....++.... ++++++|+.|+|++++++.+.+++.+++.+ ....|+++.|.++||++|++|+.+.+|+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 17 FPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 33444444444433 567999999999999999999999888765 45689999999999999999998888999
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE-----------EEEecCcCCCCCccCHHhH
Q 012124 152 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-----------PVILPTRISENFLLDPKVL 220 (470)
Q Consensus 152 ~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~l 220 (470)
+++++|++|+|+++++.+++ .+++|||+|++++|+|+.+...++..|.+ ++.++++.++++.+|++
T Consensus 97 ~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-- 173 (409)
T PRK07590 97 ISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-- 173 (409)
T ss_pred CChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc--
Confidence 99999999999999999865 55689999999999999999999999997 89999876666655543
Q ss_pred hhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccC
Q 012124 221 ESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 300 (470)
Q Consensus 221 ~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~s 300 (470)
.+++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.+++...+++..++...+++|+++|||
T Consensus 174 ----~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 248 (409)
T PRK07590 174 ----EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN-GSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFS 248 (409)
T ss_pred ----ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc-CeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCc
Confidence 25789999999999999999999999999999999 9999999999999887654456666665446899999999
Q ss_pred cccccccceeeEEEcCHHHHHHH------------HHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 012124 301 KAFAMTGWRLGYIAGPKHFVAAC------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 368 (470)
Q Consensus 301 K~~~~~G~r~G~~~~~~~~~~~l------------~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (470)
|.+|+||+|+||+++|+++++.+ .........+++.+.|.++..++..+ ...|++++++.|+++++
T Consensus 249 K~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~ 326 (409)
T PRK07590 249 KTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE--GKAQIKELIDYYMENAK 326 (409)
T ss_pred cccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHH
Confidence 99999999999999999998732 12122222357899999999988753 25789999999999999
Q ss_pred HHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecC
Q 012124 369 FLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAAS 446 (470)
Q Consensus 369 ~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~ 446 (470)
.+.+.|++. |+.+..|.+|+|+|+++++.. ++.++++.|++++||.+.||..|+. .+++||++..+
T Consensus 327 ~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~ 394 (409)
T PRK07590 327 IIREGLESA-GFEVYGGVNAPYIWVKTPDGM-----------SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGS 394 (409)
T ss_pred HHHHHHHhc-CCceecCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCC
Confidence 999999988 788888889999999998653 6778888888778999999999875 36999998778
Q ss_pred HHHHHHHHHHHHHH
Q 012124 447 LTTLQAAVERIKKG 460 (470)
Q Consensus 447 ~~~i~~~l~~l~~~ 460 (470)
++++++++++|.++
T Consensus 395 ~~~l~~~l~rl~~~ 408 (409)
T PRK07590 395 RENVLEAMERIKKA 408 (409)
T ss_pred HHHHHHHHHHHHhh
Confidence 89999999999875
No 35
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=8.4e-55 Score=431.22 Aligned_cols=351 Identities=28% Similarity=0.505 Sum_probs=309.3
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAV 171 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al~~~~ 171 (470)
..++|+|+.|.|++++++.+.+++.+.+......|+++.|.++||+++++++++.+|+++++ ++|++|+|+++++..++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 28 QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAI 107 (384)
T ss_pred hCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHH
Confidence 35789999999999888999999988877666889999999999999999999988987765 68999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
+++++|||+|++++|+|..+...++..|++++.++++. +++.+|++.|++++++++++|++++||||||.++|.+++++
T Consensus 108 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~ 186 (384)
T PRK12414 108 SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLAR 186 (384)
T ss_pred HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999999999999864 35779999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhcc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 331 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 331 (470)
|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.+|+||+|+||+++++++++.+.+......
T Consensus 187 i~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~ 265 (384)
T PRK12414 187 LAQLTRNT-DIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMV 265 (384)
T ss_pred HHHHHHHC-CeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhhee
Confidence 99999999 99999999999999876545556665544578999999999999999999999999999999998887777
Q ss_pred CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC
Q 012124 332 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 332 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
++++.+.|.++..+|.++ .+..+.++.|+++++.+.+.|++. |+.+.++.+|||+|+++++... .+
T Consensus 266 ~~~s~~~q~a~~~~l~~~----~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~---------~~ 331 (384)
T PRK12414 266 FSADTPMQHAFAEALAEP----ASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD---------ES 331 (384)
T ss_pred cCCCcHHHHHHHHHhcCC----hHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC---------CC
Confidence 889999999999999863 234467889999999999999988 7888889999999998874210 14
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~----~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
+.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|.+
T Consensus 332 ~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 332 DSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 567776677777999999998853 468999999999999999999974
No 36
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-54 Score=430.93 Aligned_cols=389 Identities=51% Similarity=0.821 Sum_probs=342.5
Q ss_pred ccccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
+++++..+.+.+...+..........+.++++|+.|+|++++++.+.+++.+.+.+....|++..|..+||+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 83 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKR 83 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHH
Confidence 56677777788877777777766677788999999999998889999999998876667799999999999999999998
Q ss_pred HcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 147 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 147 ~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+..+++..|++++.++++.++++.+|++.+++.+++
T Consensus 84 ~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 163 (393)
T PRK05764 84 DNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP 163 (393)
T ss_pred HhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc
Confidence 88887889999999999999999999999999999999999999999999999999999998667788999999999988
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc-CCCCCceEEEeccCccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~-~~~~~~~i~i~S~sK~~~~ 305 (470)
+++++++++|+||||.++|.+++++|+++|++| +++||+||+|.++.+++....++..+ .+..+++++++||||.+++
T Consensus 164 ~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~ 242 (393)
T PRK05764 164 KTKALILNSPSNPTGAVYSPEELEAIADVAVEH-DIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAM 242 (393)
T ss_pred cceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccC
Confidence 899999999999999999999999999999999 99999999999998865444455554 2235789999999999999
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 306 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
+|+|+||+++++++++.+.........+++.+.|.++...|+. ..+++++.++.++++++.+.+.|++++|+.+..|
T Consensus 243 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 319 (393)
T PRK05764 243 TGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG---PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP 319 (393)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 9999999999999999998888777778999999999999973 3688999999999999999999999888988889
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
.+|+|+|++++..... . ..++.++.+.|++++||.+.||..|+.++++|++++.+++++++++++|.+++++.+
T Consensus 320 ~g~~~~~~~~~~~~~~--~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~~~ 393 (393)
T PRK05764 320 EGAFYVFPNVSKLLGK--S----ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLESLK 393 (393)
T ss_pred CcceEEEEeccccccc--c----cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999764210 0 003578888888778999999999988899999999999999999999999987653
No 37
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.8e-54 Score=431.87 Aligned_cols=374 Identities=23% Similarity=0.393 Sum_probs=317.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCC
Q 012124 79 TVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYT 153 (470)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~ 153 (470)
+..+..........++++++|+.|+|+ +.+++.+.+++.+.+... ...|++..|..+||+++++++.+ ++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~ 94 (401)
T TIGR01264 16 IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PDGPIE 94 (401)
T ss_pred HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cCCCCC
Confidence 344444555555567789999999995 667888999998887754 46799999999999999999986 466788
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEE
Q 012124 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 233 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l 233 (470)
+++|++|+|+++++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++++|++.+++.++++++++++
T Consensus 95 ~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 174 (401)
T TIGR01264 95 ADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIV 174 (401)
T ss_pred HHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999876667889999999999888999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEE
Q 012124 234 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 234 ~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
++||||||.+++.+++++|+++|+++ +++||+||+|.+|.|++....++..+++ ..++|+++||||.|++||+|+||+
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~i 252 (401)
T TIGR01264 175 NNPSNPCGSVFSRQHLEEILAVAERQ-CLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGWI 252 (401)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEEE
Confidence 99999999999999999999999999 9999999999999987655566666654 346999999999999999999999
Q ss_pred EcCH------HHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc
Q 012124 314 AGPK------HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 387 (470)
Q Consensus 314 ~~~~------~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 387 (470)
++++ ++++.+..... ...+++.+.|.++..+|.++ .++++++.++.++++++.+.+.|++++|+.+..|.+
T Consensus 253 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~ 329 (401)
T TIGR01264 253 IIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT--PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSG 329 (401)
T ss_pred EecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCe
Confidence 9874 34444444433 24567899999999999753 268999999999999999999999987888888999
Q ss_pred eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 388 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
|+|+|++++... ..+..++.++++.|++++||.+.||..|+.++++|++++.+++++++++++|+++++++
T Consensus 330 g~f~~~~~~~~~------~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 330 AMYMMVGIEMEH------FPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred eeEEEEEecccc------cCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 999999986310 00001567888888877799999999998889999999998899999999999998753
No 38
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.9e-55 Score=432.30 Aligned_cols=349 Identities=23% Similarity=0.319 Sum_probs=315.3
Q ss_pred hcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 91 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
..+.++++|+.|+|++.+|+.+ +++.+++......|++..|.++||++|++++. + +++++|++|+|+++++.++
T Consensus 23 ~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~--~~~~~vi~t~G~~~al~~~ 96 (373)
T PRK07324 23 IAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---N--VKPENILQTNGATGANFLV 96 (373)
T ss_pred cccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---C--CChhhEEEcCChHHHHHHH
Confidence 3567899999999998888888 88888888777899999999999999999974 2 5789999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+.+++++||+|+++.|+|+.+...++..|++++.+|++.++++.+|++.+++.+++++|++++++||||||.++|.++++
T Consensus 97 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~ 176 (373)
T PRK07324 97 LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLE 176 (373)
T ss_pred HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999998777888999999999988999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++|++| |++||+||+|.++.+++. .+++.+. .+++|+++||||.+|++|+|+||+++++++++.+.+.+...
T Consensus 177 ~i~~~a~~~-~~~ii~De~y~~l~~~~~-~~s~~~~---~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~ 251 (373)
T PRK07324 177 EIVEIARSV-DAYVLSDEVYRPLDEDGS-TPSIADL---YEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYT 251 (373)
T ss_pred HHHHHHHHC-CCEEEEEccccccccCCC-CCChhhc---cCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcE
Confidence 999999999 999999999999887642 3344333 46889999999999999999999999999999999998877
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
..+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|++.+++.+..|.+|+|+|+.++...
T Consensus 252 ~~~~~~~~q~~a~~~l~~---~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~----------- 317 (373)
T PRK07324 252 MICAGVFDDMLASLALEH---RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM----------- 317 (373)
T ss_pred EecCChHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC-----------
Confidence 788999999999998875 367899999999999999999998887888889999999898887542
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
++.+++++|++++||.+.||..|+.++++||+++.+++.+++++++|+++++++
T Consensus 318 ~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 318 PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 678899998877899999999999889999999999999999999999999764
No 39
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.5e-54 Score=429.88 Aligned_cols=352 Identities=30% Similarity=0.509 Sum_probs=315.8
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAV 171 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al~~~~ 171 (470)
+.++|+|+.|.|++++++.+.+++.+.+......|++..|.++||+++++++.+.+|..++++ +|++|+|+++++.+++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~ 108 (386)
T PRK09082 29 EHGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAI 108 (386)
T ss_pred hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHH
Confidence 357899999999988888899999988876678899999999999999999998889877775 8999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
..++++||+|++++|+|+.+...++..|++++.++++.+ ++.+|++.+++.++++++++++++||||||.+++.+++++
T Consensus 109 ~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 187 (386)
T PRK09082 109 LALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRA 187 (386)
T ss_pred HHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHH
Confidence 999999999999999999999999999999999999643 5789999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhcc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 331 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 331 (470)
|+++|++| +++||+||+|.++.|++....++.+++...+++++++||||.+|++|+|+||+++++++++.+.+......
T Consensus 188 i~~~a~~~-~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~ 266 (386)
T PRK09082 188 LWQLIAGT-DIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNT 266 (386)
T ss_pred HHHHHHHC-CEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhc
Confidence 99999999 99999999999999876555666666655689999999999999999999999999999999999887777
Q ss_pred CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC
Q 012124 332 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 332 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
++++.+.|.++..++.. .+++++++++.|+++++.+.+.|++. |+.+.++.+|+|+|+++|+..+ .+
T Consensus 267 ~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~---------~~ 333 (386)
T PRK09082 267 FTVNTPAQLALADYLRA---EPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAISD---------LD 333 (386)
T ss_pred CCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccCC---------CC
Confidence 88999999999999974 37889999999999999999999986 8888889999999999974100 16
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~----~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
..++++.|++++||.+.||+.|+. .+++|++++.+++++++++++|++
T Consensus 334 ~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 334 DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 788999888888999999998853 368999999988999999999975
No 40
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-54 Score=425.82 Aligned_cols=355 Identities=32% Similarity=0.584 Sum_probs=314.4
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCC-CCcEEEecChHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYT-PDQILVSNGAKQSILQA 170 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~i~it~g~~~al~~~ 170 (470)
..+.++|+.|.|++++|+.+.+++.+.+.. ....|.+..|.+++|+++++++.+.+|+.++ +++|++|+|+++++..+
T Consensus 26 ~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 26 NPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 356899999999988899999999888754 3467999999999999999999988898777 78999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+..++++||+|++++|+|+.+...++..|++++.++.+ +++++|+|.+++++++++++|++++||||||.++|.++++
T Consensus 106 ~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~ 183 (389)
T PRK05957 106 ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLR 183 (389)
T ss_pred HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHH
Confidence 99999999999999999999998889999999999985 4567999999999988999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++|+++ |++||+||+|.++.|++....++..+.+..+++|+++||||.+|++|+|+||+++++++++++.......
T Consensus 184 ~i~~~a~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~ 262 (389)
T PRK05957 184 AVNQICAEH-GIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTI 262 (389)
T ss_pred HHHHHHHHc-CcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhc
Confidence 999999999 9999999999999887543334444444457999999999999999999999999999999999888777
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-eecCCCceEEEeeeccCccCCcccCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKI 409 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (470)
..+++.+.|.++..+|.+ ...++++.++.++++++.+.+.|++++++ .+.+|.+|+|+|++++...
T Consensus 263 ~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~---------- 329 (389)
T PRK05957 263 LICPPVVSQYAALGALQV---GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDL---------- 329 (389)
T ss_pred ccCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCC----------
Confidence 778899999999999986 35678888888999999999999988774 7778899999999997643
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012124 410 ENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 410 ~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~-~~~~i~~~l~~l~~~l~~~ 464 (470)
++.++++.|++++||.+.||..|+. ++++||+++. +++++++++++|.+.++++
T Consensus 330 -~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 330 -NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred -ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 7889999998777999999999875 4699999987 8899999999999998865
No 41
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-54 Score=426.73 Aligned_cols=377 Identities=25% Similarity=0.406 Sum_probs=328.1
Q ss_pred cccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 68 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
+++.....+....++.+...+....+++.|+|+.|+|+..+++.+.+++.+.+.. ....|++..|.++||+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (386)
T PRK07550 3 NPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR 82 (386)
T ss_pred chhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 3445555666777777777777777889999999999988888899998887754 356798899999999999999999
Q ss_pred HcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 147 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 147 ~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
.+|..+++++|++|+|+++++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++++++
T Consensus 83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~ 162 (386)
T PRK07550 83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP 162 (386)
T ss_pred HhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc
Confidence 88988899999999999999999999999999999999999999999999999999999998666778899999999988
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
+++++++++||||||.++|.+++++|+++|+++ +++||+||+|.++.++.....++.......+++++++||||.+|++
T Consensus 163 ~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~-~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 241 (386)
T PRK07550 163 RTRAIALVTPNNPTGVVYPPELLHELYDLARRH-GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALT 241 (386)
T ss_pred cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCc
Confidence 999999999999999999999999999999999 9999999999998765433333333322246899999999999999
Q ss_pred cceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC
Q 012124 307 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 386 (470)
Q Consensus 307 G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 386 (470)
|+|+||+++++++++.+.........+++.+.|.++..++.. .++|+++.++.++++++.+.+.|.+++++.+. +.
T Consensus 242 G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~ 317 (386)
T PRK07550 242 GHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAGNRAEIARRRDAFRAVFARLPGWELL-AS 317 (386)
T ss_pred ccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CC
Confidence 999999999999999999888777888999999999999975 37899999999999999999999887666553 67
Q ss_pred ceEEEeeeccC-ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFST-YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKG 460 (470)
Q Consensus 387 ~g~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~-~~~~i~~~l~~l~~~ 460 (470)
+|+|+|++++. .. ++.+++++|++++||.+.||..|+. ++++||+++. +++++++++++|+++
T Consensus 318 g~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 318 GAYFAYVRHPFPDR-----------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred ceEEEEecCCCCCC-----------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 89999999975 32 7889999888778999999999964 5699999997 889999999999875
No 42
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=7.3e-54 Score=424.93 Aligned_cols=354 Identities=39% Similarity=0.664 Sum_probs=315.1
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al~~~ 170 (470)
..+++++|+.|.|++++++.+.+++.+.+......|++..|.++||+++++++.+.+|+.++++ +|++|+|+++++.++
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~ 105 (387)
T PRK07683 26 NYDNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIA 105 (387)
T ss_pred hcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 3457899999999987788899999999887678898899999999999999998889988998 999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+..++++||+|++++|+|+++...++..|++++.++.+. +++.+|.+.+++.++++++++++++||||||.++|.++++
T Consensus 106 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~ 184 (387)
T PRK07683 106 FRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQ 184 (387)
T ss_pred HHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHH
Confidence 999999999999999999999999999999999999874 4677889999999988899999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++|+++ +++||+||+|.++.|++. ..++.++.+..+++|+++||||.+|+||+|+||+++++++++.+.+.....
T Consensus 185 ~l~~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~ 262 (387)
T PRK07683 185 DIADVLKDK-NIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYN 262 (387)
T ss_pred HHHHHHHHc-CeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhc
Confidence 999999999 999999999999988653 345566543457899999999999999999999999999999998876655
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC-ccCCcccCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST-YYGSEAEGFGKI 409 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~ 409 (470)
..+++.+.|.++..+|.++ ..++++.++.++++++.+.+.|++. |+.+..|++|+|+|+.++. ..
T Consensus 263 ~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~---------- 328 (387)
T PRK07683 263 VTCASSISQYAALEALTAG---KDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIGHFTM---------- 328 (387)
T ss_pred cCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEecccCCC----------
Confidence 5677889999999999873 5688899999999999999999887 7888889999999999875 21
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 410 ENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 410 ~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
++.+++..+++++||.+.||..|+. ++++||+++.+++++++++++|.+++++
T Consensus 329 -~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 329 -SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred -CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 5677887777778999999999864 4799999999999999999999998864
No 43
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.2e-53 Score=425.33 Aligned_cols=369 Identities=32% Similarity=0.545 Sum_probs=316.1
Q ss_pred HHHHHHHHHHHHhcCCCeEEccCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC
Q 012124 79 TVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD 155 (470)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~ 155 (470)
...+.....+....|.++|+|+.|.| ++.+++.+.+++.+.+......|+++.|.++||+++++|+.+.+|+.++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~ 94 (398)
T PRK08363 15 IRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPD 94 (398)
T ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChh
Confidence 34445555555567889999999999 677888999999988876667798899999999999999998889889999
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEe-cCcCCCCCccCHHhHhhhccCCceEEEEc
Q 012124 156 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL-PTRISENFLLDPKVLESKLTEKSRLLILC 234 (470)
Q Consensus 156 ~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~i~l~ 234 (470)
+|++|+|+++++.+++.+++++||+|++++|+|+.+...++..|.+++.+ +.+ ++++.+|++.+++.+++++++++++
T Consensus 95 ~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~-~~~~~~d~~~l~~~~~~~~~~v~l~ 173 (398)
T PRK08363 95 DVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIE-EEGWQPDIDDIRKKITEKTKAIAVI 173 (398)
T ss_pred hEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEecccc-ccCCcCCHHHHHhhCCcceEEEEEE
Confidence 99999999999999999999999999999999999999999999999888 443 3567789999999998889999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEE
Q 012124 235 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 314 (470)
Q Consensus 235 ~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~ 314 (470)
+||||||.+++.+++++|+++|+++ +++||+||+|.++.|++. ..++..++. ..++|+++||||.+++||+|+||++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~a~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~~ 250 (398)
T PRK08363 174 NPNNPTGALYEKKTLKEILDIAGEH-DLPVISDEIYDLMTYEGK-HVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGYIY 250 (398)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEhhhhhhhccCCc-ccCHHHcCc-CCcEEEEecchhccCCccceEEEEE
Confidence 9999999999999999999999999 999999999999888653 344555654 4689999999999888999999999
Q ss_pred c--CHHHHHHHHHHhhh---ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceE
Q 012124 315 G--PKHFVAACNKIQSQ---FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 389 (470)
Q Consensus 315 ~--~~~~~~~l~~~~~~---~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~ 389 (470)
+ ++++++.+...... ..++++.+.|.++..+|.. ..+|+++.++.++++++.+.+.|.+++++.+..|.+||
T Consensus 251 ~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~ 327 (398)
T PRK08363 251 FVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG---PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAF 327 (398)
T ss_pred EeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEE
Confidence 7 77777766544321 2357899999999999975 37899999999999999999999988888888899999
Q ss_pred EEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 390 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
|+|++++... ..+..+++..+++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 328 ~~~~~l~~~~---------~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 328 YIFPRIEEGP---------WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEEEEeccCC---------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999987520 014567766666777999999999974 4799999988889999999999998875
No 44
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.5e-53 Score=423.19 Aligned_cols=355 Identities=36% Similarity=0.628 Sum_probs=312.4
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAVL 172 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al~~~~~ 172 (470)
+++|+|+.|.|++.+++.+.+++.+.+......|.+..|.++||+++++++.+.+|+.+++ ++|++|+|+++++.+++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT 109 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 5789999999998888889999998887656679999999999999999999888987775 799999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCCCHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLL 249 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~ 249 (470)
+++++||+|++++|+|+++...++..|.+++.++.+. +++.+|++.+++++++ +++++++++||||||.+++.+++
T Consensus 110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~ 188 (391)
T PRK07309 110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQI 188 (391)
T ss_pred HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHH
Confidence 9999999999999999999999999999999999863 4577999999998853 68999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhh
Q 012124 250 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 329 (470)
Q Consensus 250 ~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~ 329 (470)
++|+++|++| +++||+||+|.++.|++....++..++ .+++|+++||||.+|++|+|+||+++++++++.+......
T Consensus 189 ~~l~~~~~~~-~~~ii~D~~y~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~ 265 (391)
T PRK07309 189 KALADVLKKY-DIFVISDEVYSELTYTGEPHVSIAEYL--PDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQY 265 (391)
T ss_pred HHHHHHHHHc-CcEEEEEccccceeeCCCCCCCHHHhc--cCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhh
Confidence 9999999999 999999999999998655455555554 3789999999999999999999999999999999887665
Q ss_pred ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCC
Q 012124 330 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 409 (470)
Q Consensus 330 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (470)
...+++.+.|.++..+|+++ ..+....++.|+++++.+.+.|++. |+.+..|.+|+|+|+++|+...
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~~~~~--------- 332 (391)
T PRK07309 266 LVTAATTMAQFAAVEALTNG---KDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIPAGYN--------- 332 (391)
T ss_pred cccCCChHHHHHHHHHHhCC---hhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECCCCCC---------
Confidence 56678999999999999874 3345677889999999999999988 7888889999999999886421
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 410 ENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 410 ~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
.++.++++++++++||.+.||..|+. +++|||+++.+.+++++++++|++++++.+
T Consensus 333 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 333 QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhhc
Confidence 14678888877777999999999875 579999999988999999999999998764
No 45
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1e-53 Score=421.74 Aligned_cols=357 Identities=23% Similarity=0.358 Sum_probs=303.2
Q ss_pred CchHHHHHHHHHHHHhc-CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC
Q 012124 76 PSKTVAITDQATALAQA-GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP 154 (470)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~ 154 (470)
+.....+.+.......+ |.++++|+.|+|++++++.+.+++.+... ....|+++.|.++||+++++++++++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~ 83 (374)
T PRK05839 5 PYPFEKLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEESLREAQRGFFKRRFKIELKE 83 (374)
T ss_pred cchHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc
Confidence 34455555555556666 77999999999999888888888887653 46789999999999999999999988988999
Q ss_pred CcEEEecChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEE
Q 012124 155 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 232 (470)
Q Consensus 155 ~~i~it~g~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~ 232 (470)
++|++|+|+++++..++..++ ++||.|++++|+|+.|...++..|+++++++++.++++.+|++..+ + +++++++
T Consensus 84 ~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~ 160 (374)
T PRK05839 84 NELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVI 160 (374)
T ss_pred ceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEE
Confidence 999999999999999888774 5789999999999999999999999999999987777777765443 2 4689999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc-----CCCCCceEEEeccCccccccc
Q 012124 233 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-----PGMWERTLTVNGFSKAFAMTG 307 (470)
Q Consensus 233 l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~-----~~~~~~~i~i~S~sK~~~~~G 307 (470)
+++||||||.++|.+++++|+++|+++ |++||+||+|.++.++. ..+++... ....+++|+++||||.|++||
T Consensus 161 i~nP~NPTG~~~s~~~l~~i~~~~~~~-~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 161 LNSPNNPTGRTLSLEELIEWVKLALKH-DFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHc-CCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 999999999999999999999999999 99999999999986543 23333322 122479999999999999999
Q ss_pred ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc
Q 012124 308 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 387 (470)
Q Consensus 308 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 387 (470)
+|+||+++++++++++.........+.+.+.|.++..++.. +.++++.++.++++++.+.+.| ++. .|.+
T Consensus 239 lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~g 308 (374)
T PRK05839 239 LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD----DEHAEFFRNIYAKNLKLAREIL----GIT--IPPA 308 (374)
T ss_pred ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHhc----CCC--CCCe
Confidence 99999999999999998887766678899999999888864 6788999999999999988876 333 6789
Q ss_pred eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 388 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~----~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
|+|+|++++ +..+++++|++++||.+.||..|+. ++++||+++.+++++++++++|+++++
T Consensus 309 g~fi~~~~~--------------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 309 TFYVWLPVD--------------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eEEEEEeCC--------------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 999999986 4568888888767999999988864 479999998889999999999999875
No 46
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.4e-53 Score=422.60 Aligned_cols=365 Identities=27% Similarity=0.429 Sum_probs=317.2
Q ss_pred HHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEec
Q 012124 84 DQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSN 161 (470)
Q Consensus 84 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~ 161 (470)
+......+.++++++|+.|+|+..+|+.+++++.+.+.. ....|+++.|.++||+++++++.+.+|+.++++ +|++|+
T Consensus 19 ~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~ 98 (395)
T PRK08175 19 ELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTI 98 (395)
T ss_pred HHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcc
Confidence 344445556788999999999988888788888777654 457899999999999999999998889988887 899999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc---CCceEEEEcCCCC
Q 012124 162 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSN 238 (470)
Q Consensus 162 g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~i~l~~p~n 238 (470)
|+++++.+++..+++|||+|++++|+|+.+...++..|++++.++++.+++ +++.++++++ ++++++++++|||
T Consensus 99 G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~N 175 (395)
T PRK08175 99 GSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSN 175 (395)
T ss_pred CcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCC
Confidence 999999999999999999999999999999999999999999999976543 5788887775 4789999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~ 318 (470)
|||.+++.+++++|+++|++| |++||+||+|.++.|++...+++..++...+++|+++||||.+|+||+|+||++++++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~-~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~ 254 (395)
T PRK08175 176 PTAQCVELEFFEKVVALAKRY-DVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPE 254 (395)
T ss_pred CCCCCCCHHHHHHHHHHHHHc-CcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHH
Confidence 999999999999999999999 9999999999999887655566666654357889999999999889999999999999
Q ss_pred HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCc
Q 012124 319 FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 398 (470)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~ 398 (470)
+++.+.+.......+++.+.|.++..++.. .+.|++++++.|+++++.+.+.|+++ |+.+..|.+|+|+|+++++.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~ 330 (395)
T PRK08175 255 LVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEP 330 (395)
T ss_pred HHHHHHHHHhhcccCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcc
Confidence 999999888777778888899999999975 37889999999999999999999988 78888889999999999864
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
+. ..++.+++++|++++||.|.||..|+. ++++||+++.+++.+++++++|++++++.
T Consensus 331 ~~--------~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 331 YA--------AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred cC--------CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 20 014678888888778999999998864 46999999888899999999999998754
No 47
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3.3e-53 Score=420.89 Aligned_cols=372 Identities=32% Similarity=0.557 Sum_probs=320.7
Q ss_pred ccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCC
Q 012124 71 VNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGL 150 (470)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~ 150 (470)
+..++...+.++..... ..++++|+.|.|+.+.|+.+++++.+.+......|+++.|.++||+++++++.+.+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~ 80 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV-----RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGL 80 (387)
T ss_pred hhhcCccHHHHHHHHHh-----hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 33444444444433332 2368999999999888878888888888766778988999999999999999988898
Q ss_pred CCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCC-CCCccCHHhHhhhccCCc
Q 012124 151 SYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKS 228 (470)
Q Consensus 151 ~~~~~-~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~ 228 (470)
+++++ +|++|+|+++++.+++.+++++||+|+++.|+|+.+...++..|.+++.++++++ +++.+|++.+++.+++++
T Consensus 81 ~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (387)
T PRK07777 81 EYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRT 160 (387)
T ss_pred CCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCccc
Confidence 88886 7999999999999999999999999999999999999999999999999999765 367799999999998899
Q ss_pred eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccc
Q 012124 229 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 229 ~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
++|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++....++..+++..+++|+++||||.||+||+
T Consensus 161 ~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK07777 161 RALIVNSPHNPTGTVLTAAELAAIAELAVEH-DLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW 239 (387)
T ss_pred EEEEEcCCCCCCCccCCHHHHHHHHHHHHhc-CcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc
Confidence 9999999999999999999999999999999 999999999999988665445555555445789999999999999999
Q ss_pred eeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCce
Q 012124 309 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 388 (470)
Q Consensus 309 r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g 388 (470)
|+||+++++++++.+........++.+.+.|.++..++.. .+.|++++++.++++++.+.+.|+++ |+++.+++++
T Consensus 240 RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~ 315 (387)
T PRK07777 240 KIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDH---EDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGT 315 (387)
T ss_pred eeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcc
Confidence 9999999999999998877766777888899999998876 36889999999999999999999987 8888889999
Q ss_pred EEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-----DTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-----~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
||+|++++... ..++.+++++|++++||.|.||..|+. ++++||+++.+++++++++++|+++.
T Consensus 316 ~~~~~~~~~~~---------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 316 YFLCADPRPLG---------YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred eEEEecccccC---------CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 99999976310 016789999998777999999998863 35899999999999999999998765
No 48
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.7e-53 Score=417.11 Aligned_cols=342 Identities=26% Similarity=0.486 Sum_probs=305.6
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHHHHHHHHh
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al~~~~~~l 174 (470)
+++|+.|+|++++++.+.+++.+... ....|+++.|.++||+++++|+.+.+|++++++ +|++|+|+++++..++.++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH
Confidence 58999999998888899999988764 467899899999999999999998889999998 9999999999999999999
Q ss_pred cCCC---CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 175 CSPG---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 175 ~~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
+++| |+|++++|+|+.+...++..|++++.++++.++++.+|++.++++++++++++++++||||||.+++.+++++
T Consensus 81 ~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 81 IDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred cCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHH
Confidence 9887 6999999999999999999999999999976677889999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhcc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 331 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 331 (470)
|+++|+++ |++||+||+|.++.++. ...++..++ .+++|+++||||.+|++|+|+||+++++++++.+......+.
T Consensus 161 l~~~a~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~--~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~ 236 (350)
T TIGR03537 161 TIAMCREH-GIILCSDECYTEIYFGE-PPHSALEVG--IENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFG 236 (350)
T ss_pred HHHHHHHc-CcEEEEeccccccccCC-CCCchhhcC--cCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhc
Confidence 99999999 99999999999987754 333444443 479999999999998899999999999999999998887777
Q ss_pred CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC
Q 012124 332 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 332 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
.+.+.+.|.++...+.. +.++++.++.++++++.+.+.|++. |+++..|.+|+|+|+++|+.. +
T Consensus 237 ~~~~~~~q~~~~~~l~~----~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~~-----------~ 300 (350)
T TIGR03537 237 VASPDFVQAAAKAAWSD----DNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSGI-----------D 300 (350)
T ss_pred cCCCHHHHHHHHHHhCC----cHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCCC-----------C
Confidence 77888888988888764 6788899999999999999999987 888888999999999998643 6
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
+.++++.|+++ ||.+.||..|+. ++++|++++.+++++++++++|++
T Consensus 301 ~~~l~~~L~~~-gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 301 AKDYALRLLEN-GIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHHHC-CEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 78899998765 999999999965 579999998788999999999875
No 49
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.3e-53 Score=421.68 Aligned_cols=376 Identities=25% Similarity=0.433 Sum_probs=319.8
Q ss_pred hHHHHHHHHHHHHhcCCCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCC
Q 012124 78 KTVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSY 152 (470)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~ 152 (470)
++.++.+.......+|.++++|+.|.|+ +++++.+.+++.+.+... ...|++..|..++|+++++++...+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 15 PIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 3445555555555567899999999985 566788999999888654 36798999999999999999998778888
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEE
Q 012124 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 232 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~ 232 (470)
++++|++|+|+++++.+++.++.++||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++++++++++++
T Consensus 95 ~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 174 (403)
T TIGR01265 95 TADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIV 174 (403)
T ss_pred CHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEE
Confidence 99999999999999999999999999999999999999999999999999999987666788999999999988899999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE
Q 012124 233 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312 (470)
Q Consensus 233 l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~ 312 (470)
+++||||||.++|.+++++|+++|+++ |++||+||+|.++.|++....++.+++. ..++|+++||||.|++||+|+||
T Consensus 175 i~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~ 252 (403)
T TIGR01265 175 VINPSNPCGSVFSRDHLQKIAEVARKL-GIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGW 252 (403)
T ss_pred EecCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEEE
Confidence 999999999999999999999999999 9999999999999987655566667765 46799999999999889999999
Q ss_pred EEcC--HH-----HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 313 IAGP--KH-----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 313 ~~~~--~~-----~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
++++ ++ +++.+..... ...+++.+.|.++..+|.++ .+.++++.++.++++++.+.+.|+.++|+.+..|
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 329 (403)
T TIGR01265 253 IIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENT--PQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP 329 (403)
T ss_pred EEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 9984 22 3444444332 24568999999999999753 3689999999999999999999998878888789
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
.+|+|+|++++...- .+..+..++++.|++++||.+.||..|+.++++|++++.+++++++++++|++++++.
T Consensus 330 ~~g~f~~~~~~~~~~------~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 330 EGAMYLMVKLELELF------PEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERH 402 (403)
T ss_pred CceeEEEEecccccc------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 999999999975310 0011567888888777899999999998889999999998889999999999998653
No 50
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-53 Score=420.37 Aligned_cols=379 Identities=31% Similarity=0.539 Sum_probs=322.1
Q ss_pred cccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHH
Q 012124 68 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 147 (470)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~ 147 (470)
++++.......+..+..........+.++++|+.|.|+.++|+.+.+++.+... ....|++..|.+++|+++++++. .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~-~ 81 (397)
T PRK07568 4 SKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYK-K 81 (397)
T ss_pred hhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHH-H
Confidence 334444444455555444443334566799999999998888889888877653 46789999999999999999998 4
Q ss_pred cCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCcc-CHHhHhhhccC
Q 012124 148 NGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL-DPKVLESKLTE 226 (470)
Q Consensus 148 ~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~l~~~l~~ 226 (470)
+|+.+++++|++|+|+++++.+++..++++||+|++++|+|+.+...++..|++++.++++.++++.+ +++.+++++++
T Consensus 82 ~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~ 161 (397)
T PRK07568 82 WGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP 161 (397)
T ss_pred hCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc
Confidence 78888999999999999999999999999999999999999999999999999999999875555543 68999999988
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
++++|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++....++.++++..+++++++||||.++++
T Consensus 162 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 240 (397)
T PRK07568 162 KTKAILISNPGNPTGVVYTKEELEMLAEIAKKH-DLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSAC 240 (397)
T ss_pred cceEEEEECCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCC
Confidence 999999999999999999999999999999999 9999999999999887655566666655468999999999999989
Q ss_pred cceeeEEEcC-HHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC
Q 012124 307 GWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 385 (470)
Q Consensus 307 G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 385 (470)
|+|+||++++ +++++.+.+.... .++++.+.|.++..+|+. .+.|++++++.|+++++.+.+.|++++++.+..|
T Consensus 241 G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 316 (397)
T PRK07568 241 GARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDT---PESYFDEVREEYKKRRDILYEELNKIPGVVCEKP 316 (397)
T ss_pred CcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 9999999985 6888887665442 467899999999999986 3788999999999999999999998878888889
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHc-----CCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHHH
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVALVPGDAFGD-----DTCIRISYAASLTTLQAAVE 455 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----~gI~v~pg~~f~~-----~~~iRls~~~~~~~i~~~l~ 455 (470)
.+|+|+|+++|.. +..++++.|+++ .||.+.||..|+. ++++||+|+.++++++++++
T Consensus 317 ~g~~~~~~~l~~~------------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~ 384 (397)
T PRK07568 317 KGAFYIIAKLPVD------------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAME 384 (397)
T ss_pred CcceEEEEecCCC------------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHH
Confidence 9999999999753 677888888764 5999999998842 36999999988899999999
Q ss_pred HHHHHHHhhC
Q 012124 456 RIKKGLLTLR 465 (470)
Q Consensus 456 ~l~~~l~~~~ 465 (470)
+|+++++++.
T Consensus 385 ~l~~~l~~~~ 394 (397)
T PRK07568 385 ILKEALEKYN 394 (397)
T ss_pred HHHHHHHHhh
Confidence 9999998754
No 51
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.3e-54 Score=432.95 Aligned_cols=362 Identities=20% Similarity=0.332 Sum_probs=300.5
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHH------------cCCCCCCCCcCcHHHHHHHHHHHHHHcCC--CCCCCcEEE
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIR------------EGFTRYTPNAGTLELRSAICHKLKEENGL--SYTPDQILV 159 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~l~~~~g~--~~~~~~i~i 159 (470)
.++|+|+.+++.+.. +.+.+.+.+... .....|+++.|.++||++|++|+.+.+|. .+++++|++
T Consensus 38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence 368999999987655 555555544321 12456988899999999999999987774 468999999
Q ss_pred ecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEE
Q 012124 160 SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLI 232 (470)
Q Consensus 160 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~ 232 (470)
|+|+++++..++.++++|||.|++++|+|+.+...+. ..|+++++++++.++++.+|++.+++++.+ ++++++
T Consensus 117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~ 196 (468)
T PLN02450 117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVL 196 (468)
T ss_pred ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence 9999999999999999999999999999999988888 589999999997677888999999988753 789999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC--------CCCCceEEEeccCcccc
Q 012124 233 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP--------GMWERTLTVNGFSKAFA 304 (470)
Q Consensus 233 l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~--------~~~~~~i~i~S~sK~~~ 304 (470)
+++||||||.++|.+++++|+++|++| +++||+||+|+++.|++....++.... ...+++++++||||.++
T Consensus 197 l~nP~NPTG~~~s~e~l~~ll~~a~~~-~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~ 275 (468)
T PLN02450 197 ITNPSNPLGTTTTRTELNLLVDFITAK-NIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG 275 (468)
T ss_pred EecCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence 999999999999999999999999999 999999999999888764443433221 12579999999999999
Q ss_pred cccceeeEEEcCHH-HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeec
Q 012124 305 MTGWRLGYIAGPKH-FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 383 (470)
Q Consensus 305 ~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 383 (470)
++|+|+||++++++ +++.+.+... ..+++.+.|.++..+|+++.+...++++.++.|+++++.+.+.|+++ |+.+.
T Consensus 276 l~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~ 352 (468)
T PLN02450 276 LPGFRVGAIYSNDEMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL 352 (468)
T ss_pred CCCccEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 99999999999854 5666665532 23478999999999999865523578899999999999999999998 88888
Q ss_pred CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHH
Q 012124 384 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKG 460 (470)
Q Consensus 384 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~-~~~~i~~~l~~l~~~ 460 (470)
.+.+|+|+|++++..... ....+..+++++|++++||.+.||..|+. ++||||+|+. +++++++++++|+++
T Consensus 353 ~~~~g~flwi~l~~~~~~-----~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~ 427 (468)
T PLN02450 353 KSNAGLFCWVDMRHLLKS-----NTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSF 427 (468)
T ss_pred CCCceEEEEEEchHhcCc-----CCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 899999999999754210 00113456888888878999999999874 5899999997 899999999999999
Q ss_pred HHhhC
Q 012124 461 LLTLR 465 (470)
Q Consensus 461 l~~~~ 465 (470)
+++..
T Consensus 428 l~~~~ 432 (468)
T PLN02450 428 VESDS 432 (468)
T ss_pred HHhcc
Confidence 87544
No 52
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.2e-52 Score=418.79 Aligned_cols=384 Identities=28% Similarity=0.441 Sum_probs=311.2
Q ss_pred cccccCCchHHHHHHHHHHHHhcCCCeEEccCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 70 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
++..+.+.....+.+........|+++++|+.|+| ++++++.+.+++.+.+.. ...|+++.|.++||+++++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~ 87 (404)
T PRK09265 9 KLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQ 87 (404)
T ss_pred HHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhc
Confidence 34455555555666666767677889999999998 455678888888877653 57899999999999999999976
Q ss_pred HcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 147 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 147 ~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
..+..+++++|++|+|+++++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++++++
T Consensus 88 ~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~ 167 (404)
T PRK09265 88 KGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP 167 (404)
T ss_pred cCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc
Confidence 44336889999999999999999999999999999999999999999999999999999887666778999999999988
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
+++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.|++....++..+++ ..++|+++||||.+++|
T Consensus 168 ~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~p 245 (404)
T PRK09265 168 RTKAIVIINPNNPTGAVYSKELLEEIVEIARQH-NLIIFADEIYDKILYDGAVHISIASLAP-DLLCVTFNGLSKAYRVA 245 (404)
T ss_pred cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEehhhhhccCCCCCcCCHHHcCC-CceEEEEecchhhccCc
Confidence 999999999999999999999999999999999 9999999999999887655566666654 35799999999999889
Q ss_pred cceeeEEEc--CHH----HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 307 GWRLGYIAG--PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 307 G~r~G~~~~--~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
|+|+||+++ +.+ +++.+... .....+++.+.|.++..+|.+....+.+++ .++.+.++++.+.+.|++++|+
T Consensus 246 GlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~r~~~~~~L~~~~~~ 323 (404)
T PRK09265 246 GFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELIL-PGGRLYEQRDRAWELLNAIPGV 323 (404)
T ss_pred ccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHH-HHHHHHHHHHHHHHHHhcCCCC
Confidence 999999996 444 33333322 234567889999999999964211012222 2346777899999999888888
Q ss_pred eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHH
Q 012124 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIK 458 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~ 458 (470)
.+..|.+|+|+|++++... ....++.+++..+++++||.+.||..|+. ++++|++++.+++++++++++|+
T Consensus 324 ~~~~p~~g~~l~~~~~~~~-------~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~ 396 (404)
T PRK09265 324 SCVKPKGALYAFPKLDPKV-------YPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIG 396 (404)
T ss_pred cccCCCcceEEEEEecccc-------cCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHH
Confidence 8889999999999997531 00013445455566677999999999963 57999999779999999999999
Q ss_pred HHHHhhC
Q 012124 459 KGLLTLR 465 (470)
Q Consensus 459 ~~l~~~~ 465 (470)
+++++++
T Consensus 397 ~~l~~~~ 403 (404)
T PRK09265 397 RFLSGYR 403 (404)
T ss_pred HHHHHhc
Confidence 9998654
No 53
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.7e-53 Score=429.38 Aligned_cols=366 Identities=20% Similarity=0.314 Sum_probs=299.2
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHc----CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 169 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~----~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~ 169 (470)
+++|+|+.+.+.++. .+++++.+.+.. ....|+++.|.++||++|++|+.+++|+++++++|++|+|+++++.+
T Consensus 129 p~~i~~~~~~~~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~ 206 (534)
T PLN02231 129 PSLLDKSETHGLFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHM 206 (534)
T ss_pred CccCCCCCccccCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHH
Confidence 467888876666644 555555556653 25679999999999999999999888999999999999999999999
Q ss_pred HHHHhcC-CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCccc
Q 012124 170 AVLAVCS-PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGS 242 (470)
Q Consensus 170 ~~~~l~~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~ 242 (470)
++++++. +||.|+++.|+|+.|...++..|+++++++++++++|++|+++|++++++ ++|++++++||||||.
T Consensus 207 ~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~ 286 (534)
T PLN02231 207 MMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQ 286 (534)
T ss_pred HHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCc
Confidence 9999984 89999999999999999999999999999998777899999999998854 6899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccccC-CCCcccccccCC------CCCceEEEeccCccc-ccccceeeEEE
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPG------MWERTLTVNGFSKAF-AMTGWRLGYIA 314 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~-~~~~~~~~~~~~------~~~~~i~i~S~sK~~-~~~G~r~G~~~ 314 (470)
++|.+++++|+++|++| +++||+||+|.++.|+ +....++.+++. ...++|+++||||.+ |++|+|+||++
T Consensus 287 vls~e~l~~Iv~~a~~~-~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~ 365 (534)
T PLN02231 287 VLAEENQRDIVEFCKQE-GLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 365 (534)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence 99999999999999999 9999999999999995 334455554421 123699999999976 78999999998
Q ss_pred c---CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcC-----CCChH---HHHHHHHHHHHHHHHHHHHhccCCCCeec
Q 012124 315 G---PKHFVAACNKIQSQFTSGASSISQKAGVAALGLG-----YAGGE---VVSKMVKAFRERRDFLVKSFGELEGVKMS 383 (470)
Q Consensus 315 ~---~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-----~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 383 (470)
+ ++++++.+.+... ...+++.+.|.++..+++.. .+ +. +.+++++.|+++++++.+.|++++|+.+.
T Consensus 366 ~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y-~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~ 443 (534)
T PLN02231 366 VTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESY-ESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN 443 (534)
T ss_pred EecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 6 6889999988765 45678889999988888642 22 33 34456889999999999999999899999
Q ss_pred CCCceEEEeeec--cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHH
Q 012124 384 EPQGAFYLFIDF--STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIK 458 (470)
Q Consensus 384 ~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~~~~~i~~~l~~l~ 458 (470)
.|+||||+|+++ |... .......+..++..++.+|+++.||.+.||+.|+. ..+||+++..++++++++++||+
T Consensus 444 ~p~Ggfylw~~l~lp~~~-~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~ 522 (534)
T PLN02231 444 KAEGAMYLFPRIHLPQKA-IKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLT 522 (534)
T ss_pred CCCeeeEEeccccCcHHH-HHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHH
Confidence 999999999554 4210 00000000113445678888888999999999985 23699999889999999999999
Q ss_pred HHHHhhC
Q 012124 459 KGLLTLR 465 (470)
Q Consensus 459 ~~l~~~~ 465 (470)
+++++..
T Consensus 523 ~~~~~~~ 529 (534)
T PLN02231 523 EFHKSFM 529 (534)
T ss_pred HHHHHHH
Confidence 9887653
No 54
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.3e-53 Score=426.86 Aligned_cols=363 Identities=21% Similarity=0.365 Sum_probs=298.4
Q ss_pred CeEEccCCCCCC--CC-hHHHHHHHHHHHH--------cCCCCCCCCcCcHHHHHHHHHHHHHHcC--CCCCCCcEEEec
Q 012124 95 SVIRLAAGEPDF--DT-PVLIAEAGINAIR--------EGFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSN 161 (470)
Q Consensus 95 ~~i~l~~g~~~~--~~-~~~~~~a~~~~~~--------~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~i~it~ 161 (470)
++|+|+.+++.+ +. ++.+++.....+. .....|++..|.++||++|++|+.+.+| +++++++|++|+
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~ 126 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSG 126 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEcc
Confidence 689999999876 33 4444444333211 1235688899999999999999998888 668999999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCcCCCCCccCHHhHhhhc------cCCceEEEEc
Q 012124 162 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKL------TEKSRLLILC 234 (470)
Q Consensus 162 g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l------~~~~~~i~l~ 234 (470)
|+++++++++.++++|||.|++++|+|+.+...+. ..|+++++++++.++++++|++.+++++ ..++|+|+++
T Consensus 127 Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~ 206 (496)
T PLN02376 127 GATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILT 206 (496)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEc
Confidence 99999999999999999999999999999998887 5899999999987677889999997653 2478999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC-------CCceEEEeccCccccccc
Q 012124 235 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-------WERTLTVNGFSKAFAMTG 307 (470)
Q Consensus 235 ~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~-------~~~~i~i~S~sK~~~~~G 307 (470)
+||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++.++... .+++++++||||.||+||
T Consensus 207 nP~NPTG~~~s~e~l~~L~~~a~~~-~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG 285 (496)
T PLN02376 207 NPSNPLGTMLDKDTLTNLVRFVTRK-NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG 285 (496)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCc
Confidence 9999999999999999999999999 99999999999998877656666555211 146788999999999999
Q ss_pred ceeeEEEcC-HHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC
Q 012124 308 WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 386 (470)
Q Consensus 308 ~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 386 (470)
+|+||++++ +.+.+.+...... ...+.+.|.++..+|.++.+.++++++.++.|+++++.+.+.|++. |+.+..+.
T Consensus 286 lRvG~li~~~~~l~~~~~~~~~~--~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~ 362 (496)
T PLN02376 286 FRVGIVYSFNDSVVSCARKMSSF--GLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSN 362 (496)
T ss_pred ceEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 999999985 5555555544432 3478999999999998765435678888999999999999999987 88888899
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~-~~~~i~~~l~~l~~~l~~ 463 (470)
+|+|+|+++++.... ....++..++++.|+++.||.+.||..|+. ++||||+|+. +++++++++++|++++.+
T Consensus 363 aG~flwi~l~~~~~~----~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 363 AGLFAWMDLRHLLRD----RNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred ceEEEEEEchhhhcc----CCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 999999999764210 000113467888888888999999999964 5899999997 889999999999999975
Q ss_pred hC
Q 012124 464 LR 465 (470)
Q Consensus 464 ~~ 465 (470)
.+
T Consensus 439 ~~ 440 (496)
T PLN02376 439 NK 440 (496)
T ss_pred hh
Confidence 44
No 55
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.4e-52 Score=417.70 Aligned_cols=364 Identities=21% Similarity=0.372 Sum_probs=304.1
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHH------------cCCCCCCCCcCcHHHHHHHHHHHHHHcC--CCCCCCcEE
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIR------------EGFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQIL 158 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~i~ 158 (470)
+.++|+|+..++.+ ..+.+.+.+.+... .....|.+..|.++||+++|+++.+.+| .++++++|+
T Consensus 46 p~g~i~l~~aeN~l-~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Iv 124 (447)
T PLN02607 46 PSGVIQMGLAENQV-SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIV 124 (447)
T ss_pred CCceEEEechhhhh-hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeE
Confidence 34689999998765 34555555555432 1234588889999999999999998877 358999999
Q ss_pred EecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEE
Q 012124 159 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLL 231 (470)
Q Consensus 159 it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i 231 (470)
+|+|+++++++++.++++|||.|++++|+|+++...+. ..|+++++|+++.+++|.+|++.+++++++ ++|++
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~l 204 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGV 204 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEE
Confidence 99999999999999999999999999999999988776 589999999998777788999999998853 78999
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC------CCCCceEEEeccCccccc
Q 012124 232 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP------GMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 232 ~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~------~~~~~~i~i~S~sK~~~~ 305 (470)
++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++.++. +..+++++++||||.||+
T Consensus 205 ll~nP~NPtG~~~s~e~l~~l~~~~~~~-~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~ 283 (447)
T PLN02607 205 LITNPSNPLGATVQRSVLEDILDFVVRK-NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL 283 (447)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHC-CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence 9999999999999999999999999999 999999999999888765555655431 114789999999999999
Q ss_pred ccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC
Q 012124 306 TGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 384 (470)
Q Consensus 306 ~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 384 (470)
+|+|+||+++ +++++..+...... .++|.+.|.++..+|+++.+.+.++++.+++++++++.+.+.|++. |+.+..
T Consensus 284 ~GlRvG~ivs~n~~l~~~~~~~~~~--~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~ 360 (447)
T PLN02607 284 PGFRVGTIYSYNDKVVTTARRMSSF--TLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLK 360 (447)
T ss_pred CcceEEEEEEcCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCccc
Confidence 9999999998 67777777665432 2468889999999999866545788899999999999999999987 888888
Q ss_pred CCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHH
Q 012124 385 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGL 461 (470)
Q Consensus 385 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~-~~~~i~~~l~~l~~~l 461 (470)
+.+|+|+|+++++..... ......+++++|++++||.+.||..|+. ++|+|++|+. ++++++++++||.+++
T Consensus 361 ~~ag~fvw~~L~~~~~~~-----~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 361 GNAGLFCWMNLSPLLETP-----TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFM 435 (447)
T ss_pred CCeeEEEEEEchHhhcCC-----CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 999999999997542100 0113457888888878999999999864 6899999997 8999999999999999
Q ss_pred HhhCC
Q 012124 462 LTLRP 466 (470)
Q Consensus 462 ~~~~~ 466 (470)
++.+.
T Consensus 436 ~~~~~ 440 (447)
T PLN02607 436 DRRKT 440 (447)
T ss_pred HHHHh
Confidence 87764
No 56
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.4e-51 Score=408.93 Aligned_cols=357 Identities=28% Similarity=0.404 Sum_probs=293.2
Q ss_pred HHHHHHHHHHHh--cCCCeEEccCCCCCCCChHHHHHHHHHHHHcC-----CCCCCCCcCcHHHHHHHHHHHHHHcCCCC
Q 012124 80 VAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENGLSY 152 (470)
Q Consensus 80 ~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-----~~~y~~~~g~~~lr~~ia~~l~~~~g~~~ 152 (470)
..+......... .+.++++|+.|+|++++++.+.+++.+.+.+. ...|++..|.++||+++++++.+. + +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~--~ 93 (402)
T TIGR03542 17 SEINRRVNEFRKKHPSADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-R--I 93 (402)
T ss_pred HHHHHHHHHHHhccCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-C--C
Confidence 334444444433 35689999999999988999999998887652 356988999999999999986431 2 7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCC-----------EEEEecCcCCCCCccCHHhHh
Q 012124 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA-----------TPVILPTRISENFLLDPKVLE 221 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~l~ 221 (470)
++++|++|+|+++++..++ .++.+||+|++++|+|+.+...++..|+ +++.++.+.++++.+|++.
T Consensus 94 ~~d~I~it~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-- 170 (402)
T TIGR03542 94 DPEEIFISDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-- 170 (402)
T ss_pred CHHHEEECCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc--
Confidence 8899999999999999864 5568999999999999999999999999 9999998765565555432
Q ss_pred hhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc
Q 012124 222 SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 222 ~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK 301 (470)
.+++++|++++||||||.++|.+++++|+++|++| +++||+||+|.+|.+++....++..++...+++|+++||||
T Consensus 171 ---~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 246 (402)
T TIGR03542 171 ---EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH-GSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSK 246 (402)
T ss_pred ---cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCcc
Confidence 14789999999999999999999999999999999 99999999999998765434455566554578999999999
Q ss_pred ccccccceeeEEEcCHHHH--------HHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 012124 302 AFAMTGWRLGYIAGPKHFV--------AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 373 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~--------~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 373 (470)
.+|+||+|+||++++++++ ..+.........+++.+.|.++..++.++. ..+.++.++.|+++++.+.+.
T Consensus 247 ~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 324 (402)
T TIGR03542 247 TAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEG--LQPILEAISYYMENARILRKA 324 (402)
T ss_pred ccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcc--hhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887 222222222333578899999989887643 346777888999999999999
Q ss_pred hccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHH
Q 012124 374 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQ 451 (470)
Q Consensus 374 L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~ 451 (470)
|++. |+++..+.+|+|+|+++|+.+ ++.++++.|++++||.+.||..|+. ++++||+++.++++++
T Consensus 325 L~~~-~~~~~~~~~~~f~~v~l~~~~-----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~ 392 (402)
T TIGR03542 325 LEAA-GFKVYGGEHAPYLWVKTPEGI-----------SSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIV 392 (402)
T ss_pred HHhc-CceecCCCceeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHH
Confidence 9987 788877889999999998653 6788999988777999999999875 4799999877889999
Q ss_pred HHHHHHHHH
Q 012124 452 AAVERIKKG 460 (470)
Q Consensus 452 ~~l~~l~~~ 460 (470)
+++++|+++
T Consensus 393 ~~l~~l~~~ 401 (402)
T TIGR03542 393 EACERIKEA 401 (402)
T ss_pred HHHHHHHhh
Confidence 999999875
No 57
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-51 Score=371.76 Aligned_cols=360 Identities=24% Similarity=0.430 Sum_probs=323.8
Q ss_pred CCeEEccCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 94 VSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 94 ~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+++|.++.|+|. +.+.+...+|+.++++.+ .++|+|..|....|+++|+|+.+...-..++++|++|+|.++||+
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 489999999976 445688889999998874 688999999999999999999887777789999999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHH
Q 012124 169 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 248 (470)
Q Consensus 169 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~ 248 (470)
.++.+|.+||..|+++.|+|+-|...+...|+++..+.+-++.+|.+|++.++.+++++|.++++.||+||+|.++|.+.
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~H 220 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDH 220 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH--------HHH
Q 012124 249 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--------HFV 320 (470)
Q Consensus 249 ~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~--------~~~ 320 (470)
+++|++.|+++ +++||.||+|.++.|++.+..++..+.. --.||.+++.||.|=.||||+||++..+ .++
T Consensus 221 L~kiae~A~kl-gi~vIaDEVY~~~vfg~~pfvpmg~fss-iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~ 298 (447)
T KOG0259|consen 221 LKKIAETAKKL-GIMVIADEVYGHTVFGDKPFVPMGKFSS-IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV 298 (447)
T ss_pred HHHHHHHHHHh-CCeEEehhhcceeecCCCCccchhhccc-cCceEeecccccccccCCceeeeEEEecccccccchHHH
Confidence 99999999999 9999999999999999999999888876 4678999999999988999999999743 344
Q ss_pred HHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCcc
Q 012124 321 AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYY 399 (470)
Q Consensus 321 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~ 399 (470)
+.+.+... ...+++++.|.|+-..|..- .+++.......++.+.++.++.|+++|++. ...|++.+|+|+.+.-.
T Consensus 299 q~~~~~~~-~~~~p~TiiQ~AlP~IL~kT--p~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s- 374 (447)
T KOG0259|consen 299 QGIKNFLD-IIPGPATIIQGALPDILEKT--PEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLS- 374 (447)
T ss_pred HHHHHHHh-ccCCccHhHHHHhHHHHHhC--hHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchh-
Confidence 56665544 35578999999999998752 478899999999999999999999999998 67899999999987532
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
.+....++.+|+++|.++..+.+.||..|+.++|+|++++.+.+.+++++.||+++.++.
T Consensus 375 -----~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 375 -----LFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRH 434 (447)
T ss_pred -----hhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHhh
Confidence 122334788999999998899999999999999999999999999999999999998754
No 58
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.3e-50 Score=399.10 Aligned_cols=338 Identities=27% Similarity=0.381 Sum_probs=287.5
Q ss_pred HHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCC-CCCCcEEEecChHH
Q 012124 87 TALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS-YTPDQILVSNGAKQ 165 (470)
Q Consensus 87 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~-~~~~~i~it~g~~~ 165 (470)
......+.++++|+.|+|+.+.++.+.+++.+... ..+|+++.|.++||+++++|+.+.+|++ +++++|++|+|+++
T Consensus 20 ~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~ 97 (364)
T PRK07865 20 ATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD--APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKE 97 (364)
T ss_pred HHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh--hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHH
Confidence 33345666899999999987777888888877643 3589889999999999999999988987 89999999999999
Q ss_pred HHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCC
Q 012124 166 SILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244 (470)
Q Consensus 166 al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~ 244 (470)
++..++..+ +++||.|++++|+|+.+...++..|++++.++. ++.++. ++++++++++||||||.++
T Consensus 98 ~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~~~l~~---~~~~~v~~~~p~NPtG~~~ 165 (364)
T PRK07865 98 LVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------LTELGP---QRPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------hhhCCc---ccceEEEEcCCCCCCCccC
Confidence 999988888 799999999999999999999999999888752 233332 5789999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc--CCCCCceEEEeccCcccccccceeeEEEcCHHHHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL--PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 322 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~--~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~ 322 (470)
+.+++++|+++|+++ +++||+||+|.++.+++.....+... ....+++|+++||||.++++|+|+||+++++++++.
T Consensus 166 ~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~ 244 (364)
T PRK07865 166 GVDHLRKVVAWARER-GAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAE 244 (364)
T ss_pred CHHHHHHHHHHHHHc-CCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHH
Confidence 999999999999999 99999999999988865321111111 112478999999999998899999999999999999
Q ss_pred HHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCc
Q 012124 323 CNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 402 (470)
Q Consensus 323 l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 402 (470)
+...+.....+++.+.|.++..+|.+ .+++++.++.|+++++.+.+.|++. |+.+..|++|+|+|++++.
T Consensus 245 ~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~----- 314 (364)
T PRK07865 245 LLEVRKHAGMMVPAPVQAAMVAALGD----DAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRGE----- 314 (364)
T ss_pred HHHHHHhcCCCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCCC-----
Confidence 99887777778999999999999975 6788899999999999999999987 8888888999999998743
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHH
Q 012124 403 AEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIK 458 (470)
Q Consensus 403 ~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~ 458 (470)
+..++++.|.+ .||.+.||..|+. ++++||+++.+++++++++++|+
T Consensus 315 --------~~~~~~~~l~~-~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 --------DCWDTVAWLAE-RGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred --------CHHHHHHHHHH-CCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 45677777654 5999999998873 57999999988899999999985
No 59
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-51 Score=411.87 Aligned_cols=357 Identities=22% Similarity=0.309 Sum_probs=286.5
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHH-HcCCCC-C--CCcEEEecChHHHHHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE-ENGLSY-T--PDQILVSNGAKQSILQA 170 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~-~~g~~~-~--~~~i~it~g~~~al~~~ 170 (470)
++|+|+.|+|++++|+.+.+.+. .+.. .+|+++.|.++||++|++++.+ ..+... . +++|++|+|+++++..+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~-~~~~--~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~ 177 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVD-GIIG--DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYI 177 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHH-HHhc--CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 56999999999999888888554 4432 3599999999999999995544 333222 2 34999999999999999
Q ss_pred HHH-----hcCCCCeEEEcCCCCCChHHHHHHcC--CEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccC
Q 012124 171 VLA-----VCSPGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 243 (470)
Q Consensus 171 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~ 243 (470)
+.+ +++|||+|++++|+|+.|...++..| .++++++.+++++|.+|++.+++++++++|+|++++||||||.+
T Consensus 178 ~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v 257 (527)
T PRK09275 178 FDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVA 257 (527)
T ss_pred HHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCC
Confidence 886 68999999999999999999988775 55666666666789999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHH--hCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH---
Q 012124 244 YPKNLLDEIARIVA--KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--- 318 (470)
Q Consensus 244 ~s~~~~~~l~~~~~--~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~--- 318 (470)
+|.+++++|+++|+ ++ +++||+||+|.+|.+. ..++.... .+++|+++||||.|+++|||+||++++++
T Consensus 258 ~s~e~l~~I~~ia~~~~~-~l~II~DEvY~~f~~~---~~s~~~~~--~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~ 331 (527)
T PRK09275 258 MSDESLEKIADIVNEKRP-DLMIITDDVYGTFVDD---FRSLFAVL--PYNTILVYSFSKYFGATGWRLGVIALHEDNVF 331 (527)
T ss_pred CCHHHHHHHHHHHHhcCC-CcEEEECCCChhhccc---ccCHHHhC--CCCEEEEeehhhhccCcHhHHhhhhcCchhHH
Confidence 99999999999995 45 8999999999997642 33443332 47999999999999999999999999886
Q ss_pred --HHHHH--------------------------------HHHhhhccCCCChHHHHHH-----HHHHhcCCCChHHHHHH
Q 012124 319 --FVAAC--------------------------------NKIQSQFTSGASSISQKAG-----VAALGLGYAGGEVVSKM 359 (470)
Q Consensus 319 --~~~~l--------------------------------~~~~~~~~~~~~~~~q~a~-----~~~l~~~~~~~~~~~~~ 359 (470)
+++.+ +++....+.|.+.+.|.++ .++++. .+.+.+++
T Consensus 332 ~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~---~~~~~~~~ 408 (527)
T PRK09275 332 DKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE---EDAYKKAM 408 (527)
T ss_pred HHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC---chHHHHHH
Confidence 33333 4666667788999999873 344554 36789999
Q ss_pred HHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCcc----CCccc-CCCCCCCHHHHHHHHHHcCCEEEECCCCCC
Q 012124 360 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY----GSEAE-GFGKIENSESLCRYLLDKAQVALVPGDAFG 434 (470)
Q Consensus 360 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~----~~~~~-~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~ 434 (470)
++.|++|++.+.+.|. + ++...+|.++||+|++++... +.... -..+..++.+++.+|++++||.+.||..|+
T Consensus 409 ~~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg 486 (527)
T PRK09275 409 KDIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFG 486 (527)
T ss_pred HHHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhC
Confidence 9999999999999883 2 344457899999999987531 00000 000112578899999999999999999998
Q ss_pred C-CCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012124 435 D-DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 435 ~-~~~iRls~~~-~~~~i~~~l~~l~~~l~~~~ 465 (470)
. ++++|+|++. +++++.++.+||+++++++.
T Consensus 487 ~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 487 GPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred CCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 5 5789999996 88999999999999998764
No 60
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.9e-50 Score=395.11 Aligned_cols=348 Identities=26% Similarity=0.355 Sum_probs=295.4
Q ss_pred CchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCC-CCC
Q 012124 76 PSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS-YTP 154 (470)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~-~~~ 154 (470)
+.+..++.....+....++++++|+.|+|+.++++.+.+++.+... ...|+++.|.++||+++++++.+.+|++ +++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~ 80 (357)
T TIGR03539 3 DFPWDSLAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDP 80 (357)
T ss_pred cchHHHHHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc
Confidence 4455666666666677788899999999988778888888877643 4679889999999999999999988987 999
Q ss_pred CcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEE
Q 012124 155 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 233 (470)
Q Consensus 155 ~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l 233 (470)
++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|++++.++ +++.+. .+++++|++
T Consensus 81 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~ 148 (357)
T TIGR03539 81 TAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWL 148 (357)
T ss_pred CeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEE
Confidence 99999999999999998888 79999999999999999999999999988764 223332 247899999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc--cCCCCCceEEEeccCcccccccceee
Q 012124 234 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS--LPGMWERTLTVNGFSKAFAMTGWRLG 311 (470)
Q Consensus 234 ~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~--~~~~~~~~i~i~S~sK~~~~~G~r~G 311 (470)
++||||||.++|.+++++|+++|+++ |++||+||+|.++.|++.....+.. .+...+++|+++||||.++++|+|+|
T Consensus 149 ~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G 227 (357)
T TIGR03539 149 NSPGNPTGRVLSVDELRAIVAWARER-GAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEE
Confidence 99999999999999999999999999 9999999999998886532111111 11224689999999999988999999
Q ss_pred EEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEE
Q 012124 312 YIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYL 391 (470)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~ 391 (470)
|+++++++++.+.+.+.....+++.+.|.++..+|++ ..++++.++.|+++++.+.+.|++. |+.+..|.+|+|+
T Consensus 228 ~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~ 302 (357)
T TIGR03539 228 FVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD----DGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYL 302 (357)
T ss_pred EEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEE
Confidence 9999999999998887777778999999999999974 6778889999999999999999887 7888889999999
Q ss_pred eeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHH
Q 012124 392 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERI 457 (470)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l 457 (470)
|++++. +..++.+.|. ++||.+.||..|+. ++++||+++.+++++++++++|
T Consensus 303 ~~~~~~-------------~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 303 WATRGE-------------DAWDTVDRLA-ELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred EEECCC-------------CHHHHHHHHH-hCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 999863 4667887775 55999999998864 4799999999889999999886
No 61
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-49 Score=395.47 Aligned_cols=346 Identities=30% Similarity=0.491 Sum_probs=298.0
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 169 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~ 169 (470)
..++++|+.|.|++++++.+.+++.+.+... ...|++..|.+++|+++++++.+.++..+++++|++|+|+++++..
T Consensus 32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~ 111 (394)
T PRK06836 32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV 111 (394)
T ss_pred CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH
Confidence 3468999999998888889999998887643 5779899999999999999999888888999999999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHH
Q 012124 170 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 249 (470)
Q Consensus 170 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~ 249 (470)
++..++++||.|++++|+|+.+...++..|++++.++++++ ++++|++.++++++++++++++++||||||.++|.+++
T Consensus 112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~ 190 (394)
T PRK06836 112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETL 190 (394)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHH
Confidence 99999999999999999999999999999999999999754 46799999999998899999999999999999999999
Q ss_pred HHHHHHHHh------CCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHH-
Q 012124 250 DEIARIVAK------HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA- 322 (470)
Q Consensus 250 ~~l~~~~~~------~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~- 322 (470)
++|+++|++ | +++||+||+|.++.+++...+++... .+++++++||||.+++||+|+||+++++++.+.
T Consensus 191 ~~l~~la~~~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~---~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~ 266 (394)
T PRK06836 191 KALAALLEEKSKEYGR-PIYLISDEPYREIVYDGAEVPYIFKY---YDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDAD 266 (394)
T ss_pred HHHHHHHHHhhhccCC-CeEEEEeccccccccCCCCCCChHHc---cCcEEEEecchhhccCcceeeEEEecCHHHhhhH
Confidence 999999999 8 99999999999998865433333322 468999999999999999999999999876432
Q ss_pred -----HHHHhhhc-cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeecc
Q 012124 323 -----CNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 396 (470)
Q Consensus 323 -----l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~ 396 (470)
+....... ..+++.+.|.++..++.++ ..++.|+++++.+.+.|+++ |+.+..|.+|||+|+++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--------~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~ 337 (394)
T PRK06836 267 DLVAALVFANRILGFVNAPALMQRVVAKCLDAT--------VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSP 337 (394)
T ss_pred HHHHHHHHHhhccccccCCHHHHHHHHHHhCCh--------HHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCC
Confidence 11112211 2467888999999988751 12567888999999999888 888888999999999987
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
.. +..++++.|. ++||.+.||..|+.++++||+++.+++++++++++|++++++++
T Consensus 338 ~~------------~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 338 EE------------DDVAFCEKAK-KHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred CC------------CHHHHHHHHH-hCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 63 6788887765 55999999999988899999999899999999999999998875
No 62
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.1e-51 Score=405.64 Aligned_cols=328 Identities=23% Similarity=0.348 Sum_probs=276.9
Q ss_pred ccccccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCC--------C----------------------CChHHHHHHH
Q 012124 67 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD--------F----------------------DTPVLIAEAG 116 (470)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~--------~----------------------~~~~~~~~a~ 116 (470)
+++++..++.+....+..++.++.+.|.++|+|+.|+|+ + .+++.+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~ 90 (407)
T PLN02368 11 LNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK 90 (407)
T ss_pred cCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence 455666667666667777778888889999999999997 3 1455566665
Q ss_pred HHHHH--cCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEcCCCCCChHH
Q 012124 117 INAIR--EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPE 193 (470)
Q Consensus 117 ~~~~~--~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~ 193 (470)
..... .....|+++.|.++||++|++|+.+++|+.+++++|++|+|+++++..++.+++ +|||+|++++|+|+.|..
T Consensus 91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~ 170 (407)
T PLN02368 91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA 170 (407)
T ss_pred HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence 44222 236789999999999999999999888998999999999999999999999987 799999999999999999
Q ss_pred HHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEe
Q 012124 194 MARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267 (470)
Q Consensus 194 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~D 267 (470)
.++..|++++.++++.+++|++|++.|++.+++ ++|++++++||||||.++|.+++++|+++|++| +++||+|
T Consensus 171 ~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~-~~~II~D 249 (407)
T PLN02368 171 TISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQE-RLVLLGD 249 (407)
T ss_pred HHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEE
Confidence 999999999999998777899999999999864 689999999999999999999999999999999 9999999
Q ss_pred ccccccccCCC-Cccccccc----CC---CCCceEEEeccCccc-ccccceeeEEE---cCHHHHHHHHHHhhhccCCCC
Q 012124 268 EIYEHIIYAPA-THTSFASL----PG---MWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQSQFTSGAS 335 (470)
Q Consensus 268 d~~~~~~~~~~-~~~~~~~~----~~---~~~~~i~i~S~sK~~-~~~G~r~G~~~---~~~~~~~~l~~~~~~~~~~~~ 335 (470)
|+|.++.|++. ...++..+ ++ ..+++|+++||||.| +++|+|+||++ +++++++.+.+... ..++++
T Consensus 250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~~ 328 (407)
T PLN02368 250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSPN 328 (407)
T ss_pred ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCCC
Confidence 99999999764 33444332 11 135899999999998 89999999999 58999999988753 456789
Q ss_pred hHHHHHHHHHHhcCCCC----hHHH---HHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeecc
Q 012124 336 SISQKAGVAALGLGYAG----GEVV---SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 396 (470)
Q Consensus 336 ~~~q~a~~~~l~~~~~~----~~~~---~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~ 396 (470)
.+.|.++.++|+.+..+ +.+. +++++.|++|++++.+.|++++|+.+..|+|+||+|++++
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 99999999999753200 1233 5578999999999999999999999999999999997665
No 63
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.2e-51 Score=407.47 Aligned_cols=362 Identities=16% Similarity=0.178 Sum_probs=286.0
Q ss_pred cccCCchHHHHHHHHHHHHhcCCCeEEccCCC---CCCCCh--HHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHH
Q 012124 72 NAVKPSKTVAITDQATALAQAGVSVIRLAAGE---PDFDTP--VLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLK 145 (470)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~~~~~~--~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~ 145 (470)
...+++....+....... ..+++|+|+.|. |+..+| +.+.+++.+.+.. ....|++..|.++||+++++|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~ 83 (396)
T PRK09257 6 EAAPADPILGLMEAFRAD--PRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLF 83 (396)
T ss_pred CCCCCChHHHHHHHHhhC--CCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhc
Confidence 344454444443333221 124679999996 443444 6788888887654 34579999999999999999998
Q ss_pred HHcCCCCCCCcE--EEecChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHh
Q 012124 146 EENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 221 (470)
Q Consensus 146 ~~~g~~~~~~~i--~it~g~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 221 (470)
+..+..+++++| ++|+|+++++.++++.+ ++|||+|++++|+|+.|..+++..|++++.+|+..++++++|+|.++
T Consensus 84 ~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~ 163 (396)
T PRK09257 84 GADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAML 163 (396)
T ss_pred CCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHH
Confidence 755555688887 99999999999998766 58999999999999999999999999999999843445789999999
Q ss_pred hhcc---CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccC-CCCcccccccCCCCCceEEEe
Q 012124 222 SKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVN 297 (470)
Q Consensus 222 ~~l~---~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~ 297 (470)
+.++ .+++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.++ +....++..+++..+++|+++
T Consensus 164 ~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~ 242 (396)
T PRK09257 164 ADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKER-GLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVAS 242 (396)
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEE
Confidence 9875 2345556699999999999999999999999999 9999999999998875 222345555554457899999
Q ss_pred ccCcccccccceeeEEEc---CHH----HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHH
Q 012124 298 GFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAFRERR 367 (470)
Q Consensus 298 S~sK~~~~~G~r~G~~~~---~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~---~~~~~~~~~~~~~~~~ 367 (470)
||||.++++|+|+||+++ +++ ++..+.........+++.+.|.++..++.++.+ .+++++++++.|++++
T Consensus 243 SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr 322 (396)
T PRK09257 243 SFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMR 322 (396)
T ss_pred EcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988999999973 444 344444444445556789999999999987532 1567889999999999
Q ss_pred HHHHHHhccCC---CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee
Q 012124 368 DFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 444 (470)
Q Consensus 368 ~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~ 444 (470)
+.+.+.|+++. ++.+..|++|||+|++++ . +++.+|++++||.+.|. + ||+|+
T Consensus 323 ~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~---------------~-~~~~~l~~~~~V~~~p~------~--ri~~~ 378 (396)
T PRK09257 323 QLLVEALKAKGPSRDFDFIARQRGMFSYSGLT---------------P-EQVDRLREEFGVYAVGS------G--RINVA 378 (396)
T ss_pred HHHHHHHHhcCCCCCcccccccceEEEecCCC---------------H-HHHHHHHHcCCEEEcCC------C--eEEEe
Confidence 99999998862 377888999999999874 2 34566778889999873 2 99998
Q ss_pred c-CHHHHHHHHHHHHHH
Q 012124 445 A-SLTTLQAAVERIKKG 460 (470)
Q Consensus 445 ~-~~~~i~~~l~~l~~~ 460 (470)
. ++++|++++++|+++
T Consensus 379 ~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 379 GLNESNIDYVAEAIAAV 395 (396)
T ss_pred eCCHHHHHHHHHHHHhh
Confidence 6 999999999999875
No 64
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-51 Score=407.86 Aligned_cols=364 Identities=17% Similarity=0.162 Sum_probs=285.3
Q ss_pred ccCCchHHHHHHHHHHHHhcCCCeEEccCCCC-CCCChHHHHHHHHHHH----H-cCCCCCCCCcCcHHHHHHHHHHHHH
Q 012124 73 AVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DFDTPVLIAEAGINAI----R-EGFTRYTPNAGTLELRSAICHKLKE 146 (470)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~----~-~~~~~y~~~~g~~~lr~~ia~~l~~ 146 (470)
..+..++..+.+.+.+ ..++++++|+.|.| +..++....+++.+++ . ....+|+++.|.++||+++++|+.+
T Consensus 10 ~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 87 (404)
T PTZ00376 10 LGPPDPILGLAAAFKA--DPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFG 87 (404)
T ss_pred cCCCChHHHHHHHHhh--cCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcC
Confidence 3344444444443321 22457899999996 4555443344444443 2 2357899999999999999999976
Q ss_pred HcCCCCCCCcEE--EecChHHHHHHHHH---HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHh
Q 012124 147 ENGLSYTPDQIL--VSNGAKQSILQAVL---AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 221 (470)
Q Consensus 147 ~~g~~~~~~~i~--it~g~~~al~~~~~---~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 221 (470)
..+..+++++|+ .|.|+++++.+++. ++++|||+|++++|+|+.|...++..|++++.+|+..++++++|++.++
T Consensus 88 ~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~ 167 (404)
T PTZ00376 88 EASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGML 167 (404)
T ss_pred CCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHH
Confidence 555667889998 59999999988875 5689999999999999999999999999999999965556889999999
Q ss_pred hhcc---CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC--CcccccccCCCCCceEEE
Q 012124 222 SKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTLTV 296 (470)
Q Consensus 222 ~~l~---~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~--~~~~~~~~~~~~~~~i~i 296 (470)
+.++ ++++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ...++..+....+++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i 246 (404)
T PTZ00376 168 EDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK-NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVA 246 (404)
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 9884 3456677799999999999999999999999999 999999999999988541 223444444334689999
Q ss_pred eccCcccccccceeeEE---EcCHHHHHHH----HHHhhhccCCCChHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHH
Q 012124 297 NGFSKAFAMTGWRLGYI---AGPKHFVAAC----NKIQSQFTSGASSISQKAGVAALGLGYAGG---EVVSKMVKAFRER 366 (470)
Q Consensus 297 ~S~sK~~~~~G~r~G~~---~~~~~~~~~l----~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~---~~~~~~~~~~~~~ 366 (470)
+||||.++++|+|+||+ ++++++++.+ .+.......+++.+.|.++..+|+++.+.+ +++++.++.|+++
T Consensus 247 ~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (404)
T PTZ00376 247 QSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNM 326 (404)
T ss_pred EeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 5788765544 333333344568899999999998743212 3466778899999
Q ss_pred HHHHHHHhccCC---CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe
Q 012124 367 RDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 443 (470)
Q Consensus 367 ~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~ 443 (470)
++.+.+.|+++. ++.+..|.+|||+|++++ .+++++|++++||.+.||. |+++
T Consensus 327 r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~----------------~~~~~~L~~~~~v~v~p~~--------Ris~ 382 (404)
T PTZ00376 327 RQLLYDELKALGSPGDWEHIINQIGMFSFTGLT----------------KEQVERLIEKYHIYLLDNG--------RISV 382 (404)
T ss_pred HHHHHHHHHhcCCCCcccccccCceEEEecCCC----------------HHHHHHHHHhCCEeecCCC--------eEEE
Confidence 999999998862 355667899999999863 3678889988899999971 9999
Q ss_pred ec-CHHHHHHHHHHHHHHHHh
Q 012124 444 AA-SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 444 ~~-~~~~i~~~l~~l~~~l~~ 463 (470)
+. +.+++++++++|++++..
T Consensus 383 ~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 383 AGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred eccCHHhHHHHHHHHHHHHhc
Confidence 84 899999999999998753
No 65
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-50 Score=368.40 Aligned_cols=355 Identities=29% Similarity=0.495 Sum_probs=322.7
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.+++.|+..+.|+..|+.+++++++.+.++.++|+ .+..++.+++++|.+++++..+.++.|++++|...++..+++.
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~ 102 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRA 102 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHH
Confidence 57899999999999999999999999999999994 6778899999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCc-CCCCCccCHHhHhhhccC-CceEEEEcCCCCCcccCCCHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR-ISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
|.+|||.|++..|.|+++.+.....|.+++..|+. .++.|.+|++.||+++.+ +++++++||||||||.+++.+++++
T Consensus 103 ~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 103 LTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred hCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence 99999999999999999999999999999999998 456788899999999965 5799999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC-CCceEEEeccCcccccccceeeEEEcCHH-HHH-HHHHHhh
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVA-ACNKIQS 328 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~S~sK~~~~~G~r~G~~~~~~~-~~~-~l~~~~~ 328 (470)
|.++|.+| |+.||.||.|+++.+.++.+.++.++.+. .+++|.+.|.||+|+++|+.+++++.+.+ +.. .++++..
T Consensus 183 i~elc~kh-~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~ 261 (388)
T COG1168 183 IAELCLRH-GVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR 261 (388)
T ss_pred HHHHHHHc-CCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH
Confidence 99999999 99999999999999999888888777542 48899999999999999999999887654 433 3455566
Q ss_pred hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCCeecCCCceEEEeeeccCccCCcccCCC
Q 012124 329 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 407 (470)
Q Consensus 329 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 407 (470)
....++|.++..|..++.+. ++.|++++.+.++.+++++.+.|++ +|++++..|++.+.+|+++....
T Consensus 262 ~~~~~~n~lg~~A~~aAY~~---G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~-------- 330 (388)
T COG1168 262 NGLHGPSALGIIATEAAYNQ---GEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELG-------- 330 (388)
T ss_pred hcCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccC--------
Confidence 67778999999999999998 4899999999999999999999988 79999999999999999997652
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCCC--CcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 408 KIENSESLCRYLLDKAQVALVPGDAFGDD--TCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 408 ~~~~~~~l~~~L~~~~gI~v~pg~~f~~~--~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
.++.++.+.|+++.+|.+.+|..||.. +++|++++.+.+.++++++||+..++..
T Consensus 331 --l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 331 --LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred --CChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 256789999999999999999999964 6999999999999999999999988754
No 66
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.6e-50 Score=400.63 Aligned_cols=352 Identities=18% Similarity=0.315 Sum_probs=285.7
Q ss_pred CCeEEccCCCCCCCC-h-HHHHHHHHHHHHcC-----CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 94 VSVIRLAAGEPDFDT-P-VLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~-~-~~~~~a~~~~~~~~-----~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
+++|+|+.|.|+..+ + +.+.+++.+.+... ...|+++.|.++||++|++|+.+.+|+.+++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 567999999998544 3 45667777766532 3579999999999999999999889999999999999999999
Q ss_pred HHHHHHHhcC-----CCCeEEE-cCCCCCChHHHHHHcCC----EEEEecCcCCC-CCccCHHhHhhhccCCceEEEEcC
Q 012124 167 ILQAVLAVCS-----PGDEVII-PAPFWVSYPEMARIADA----TPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCS 235 (470)
Q Consensus 167 l~~~~~~l~~-----~gd~Vlv-~~p~y~~~~~~~~~~g~----~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~i~l~~ 235 (470)
+.+++.++++ +||.|++ ++|+|+.|...+...|. .+..++++.++ ++++|++.|+ +.++++++++++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~ 187 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSR 187 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEec
Confidence 9999999985 6899999 79999999886654332 12223332221 4679999997 456789999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC-CCCCceEEEeccCcccccccceeeEEE
Q 012124 236 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIA 314 (470)
Q Consensus 236 p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~S~sK~~~~~G~r~G~~~ 314 (470)
||||||.++|.+++++|+++|+++ +++||+||+|.++... ....... ...+++|+++||||. ++||+|+||++
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~----~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i 261 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQH-NIPLLIDNAYGPPFPG----IIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVI 261 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHc-CCcEEEeCCccccCCC----cchhhcCccccCCeEEEeccccc-CCCcceEEEEe
Confidence 999999999999999999999999 9999999999863211 1111111 114789999999996 78999999999
Q ss_pred cCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHH-HHHHHHHHHHHHHHHhcc-CC--CCeecCCCceEE
Q 012124 315 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAFY 390 (470)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~~g~~ 390 (470)
+++++++.+.........+++.+.|.++..+++++.+ .++..+ +++.|+++++.+.+.|.+ ++ ++.+..|++|+|
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~f 340 (416)
T PRK09440 262 ADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIF 340 (416)
T ss_pred CCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceE
Confidence 9999999999888877788999999999999998765 566555 688899999999998876 33 356678899999
Q ss_pred EeeeccC-ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---------CCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 391 LFIDFST-YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 391 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---------~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
+|++++. .+ ++.++++.|. ++||.+.||..|+. .+++||+++.+++++++++++|+++
T Consensus 341 iw~~~~~~~~-----------~~~~~~~~l~-~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~ 408 (416)
T PRK09440 341 LWLWFKDLPI-----------TTEELYQRLK-ARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEE 408 (416)
T ss_pred EEEECCCCCC-----------CHHHHHHHHH-HCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHH
Confidence 9999986 22 6678888765 56999999998853 2589999988889999999999999
Q ss_pred HHhhCC
Q 012124 461 LLTLRP 466 (470)
Q Consensus 461 l~~~~~ 466 (470)
+++..+
T Consensus 409 ~~~~~~ 414 (416)
T PRK09440 409 VEKAYA 414 (416)
T ss_pred HHHHhh
Confidence 987654
No 67
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-49 Score=393.55 Aligned_cols=336 Identities=24% Similarity=0.366 Sum_probs=283.1
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcC--CCCCCCCcCcHHHHHHHHHHHHHHc--CCCCCCCcEEEecChHHHHHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEEN--GLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~--g~~~~~~~i~it~g~~~al~~~ 170 (470)
.+++|+.|+|++++|+.+.+++.+++... ...| +..|.++||++|++|+.+.+ |+.+++++|++|+|+++++..+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~ 107 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSL 107 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHH
Confidence 47999999999999999999999987764 3578 55799999999999998766 5778999999999999999988
Q ss_pred HHHhcCCCC-eEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCCCcccCCC
Q 012124 171 VLAVCSPGD-EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 171 ~~~l~~~gd-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~nPtG~~~s 245 (470)
+.+++.+|| .|++++|+|+.|...++..|++++.++++. +++++|++.|+++++ +++++|++++||||||.++|
T Consensus 108 ~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s 186 (374)
T PRK02610 108 LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLT 186 (374)
T ss_pred HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCC
Confidence 888888886 899999999999999999999999999863 457899999999886 48999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHH
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 325 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~ 325 (470)
.+++++|+++| + +++||+||+|.+|.+. ..+..+.. .+++|+++||||.+|+||+|+||+++++++++.+.+
T Consensus 187 ~~~l~~l~~~~--~-~~~iI~De~Y~~~~~~----~~~~~~~~-~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~ 258 (374)
T PRK02610 187 AAELEWLRSLP--E-DILVVIDEAYFEFSQT----TLVGELAQ-HPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEK 258 (374)
T ss_pred HHHHHHHHhcc--C-CcEEEEeccccccCcc----chHHHHhc-CCCEEEEEecchhccCcccceeeeecCHHHHHHHHH
Confidence 99999999876 5 8999999999997542 12223333 467899999999999999999999999999999988
Q ss_pred HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccC
Q 012124 326 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 405 (470)
Q Consensus 326 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 405 (470)
.+. .++.+.+.|.++..++.+ .+.+.+.+++.+++ ++.+.+.|++++++.+. |.+|+|+|+++|...
T Consensus 259 ~~~--~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~------ 325 (374)
T PRK02610 259 VRL--PYNLPSFSQLAAQLALEH---RQELLAAIPEILQE-RDRLYQALQELPQLRVW-PSAANFLYLRLSQDA------ 325 (374)
T ss_pred hcC--CCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCC------
Confidence 763 355789999999999875 36677777766665 67788899888787754 788999999998643
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012124 406 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 406 ~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
+..++++.|.+ +||.+.++ ++++||+++.+ +++++++++|+++++++.
T Consensus 326 -----~~~~~~~~l~~-~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~~~ 373 (374)
T PRK02610 326 -----ALAALHQALKA-QGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQLE 373 (374)
T ss_pred -----CHHHHHHHHHH-CCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhhcC
Confidence 67888888754 59999864 46899999864 568999999999988764
No 68
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.9e-49 Score=395.27 Aligned_cols=358 Identities=22% Similarity=0.321 Sum_probs=280.0
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHH-HHHHHHcCCC-CCCC--cEEEecChHHHHHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC-HKLKEENGLS-YTPD--QILVSNGAKQSILQA 170 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia-~~l~~~~g~~-~~~~--~i~it~g~~~al~~~ 170 (470)
++|+|+.|+|++++++.+ .++.+.+.. . +|+++.|..+++++++ +|+.+.++.. ..++ +|++|+|+++++..+
T Consensus 95 ~~i~l~~g~p~~~~~~~~-~~~~~~~~~-~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFL-YEMCDGIIG-D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHHhhcCCCCCCCCCHHH-HHHHHHhhc-C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 469999999999865444 555555432 2 5877888888888887 5666655433 3334 899999999999998
Q ss_pred HHH-----hcCCCCeEEEcCCCCCChHHHHHHc--CCEEEEecCcCCCC-----CccCHHhHhhhccCCceEEEEcCCCC
Q 012124 171 VLA-----VCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISEN-----FLLDPKVLESKLTEKSRLLILCSPSN 238 (470)
Q Consensus 171 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~~~l~~~l~~~~~~i~l~~p~n 238 (470)
+.+ +++|||+|++++|+|+.|...++.. |++++.++.+.+++ |.+|++.+++++++++|+|++++|||
T Consensus 172 ~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~N 251 (521)
T TIGR03801 172 FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSN 251 (521)
T ss_pred HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCC
Confidence 887 6899999999999999999987775 78888888765433 88999999999888999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhC-CCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 239 PTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~-~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
|||.++|.+++++|+++|++| ++++||+||+|.+|.+. ..++.... .+++|+++||||.||++|||+||+++++
T Consensus 252 PTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~~--~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 252 PPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAEL--PYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhhC--CCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 999999999999999999874 38999999999997752 33444443 3689999999999999999999999986
Q ss_pred H-----HHH--------HH------------------------HHHhhhccCCCChHHHH-----HHHHHHhcCCCChHH
Q 012124 318 H-----FVA--------AC------------------------NKIQSQFTSGASSISQK-----AGVAALGLGYAGGEV 355 (470)
Q Consensus 318 ~-----~~~--------~l------------------------~~~~~~~~~~~~~~~q~-----a~~~~l~~~~~~~~~ 355 (470)
+ ++. .+ +++....+.+.+.+.|. ++.++++. .+.+
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~---~~~y 403 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK---ENAY 403 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc---chhH
Confidence 4 221 11 34455556677888776 34455554 3678
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccC----CcccC-CCCCCCHHHHHHHHHHcCCEEEECC
Q 012124 356 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG----SEAEG-FGKIENSESLCRYLLDKAQVALVPG 430 (470)
Q Consensus 356 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~----~~~~~-~~~~~~~~~l~~~L~~~~gI~v~pg 430 (470)
.+++++.+++|++.+.+.| .+ .+...++.++||+|+++++... ..... ..+..++.+++.+|++++||.+.||
T Consensus 404 ~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG 481 (521)
T TIGR03801 404 KAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPG 481 (521)
T ss_pred HHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCc
Confidence 9999999999999999998 22 2334568999999999975310 00000 0001156889999999999999999
Q ss_pred CCCCC-CCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012124 431 DAFGD-DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 431 ~~f~~-~~~iRls~~~-~~~~i~~~l~~l~~~l~~~~ 465 (470)
..|+. ++++|+|++. ++++++++.++|+++++++.
T Consensus 482 ~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 482 GGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred hhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 99986 4689999996 89999999999999998764
No 69
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-49 Score=386.85 Aligned_cols=335 Identities=24% Similarity=0.377 Sum_probs=283.7
Q ss_pred HHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 86 ATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 86 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+......+.++++|+.|++++.+|+.+.+++.+.+. ....|+ ..|.++||++|++++ + +++++|++|+|+++
T Consensus 22 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~-~~~~~~lr~~ia~~~----~--~~~~~I~it~G~~~ 93 (357)
T PRK14809 22 ARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAE-RVHSYP-KASHADLTAALADRW----D--VSPEQVWLANGGDG 93 (357)
T ss_pred HHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHh-hhhcCC-CCCHHHHHHHHHHHh----C--CCcceEEECCCHHH
Confidence 344433556899999999999998888899888765 367784 578999999999987 3 68899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCC
Q 012124 166 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 166 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s 245 (470)
++.++++++++|||.|++++|+|+.+...++..|++++.++++.++++.++++.+++.. +++++|++++||||||.++|
T Consensus 94 al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s 172 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIP 172 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCC
Confidence 99999999999999999999999999888899999999999976667888888887765 36899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHH
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 325 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~ 325 (470)
.+++++|+++|+ + +++||+||+|.++.+.+. .+..+. ..+++++++||||.+|+||+|+||+++++++++.+.+
T Consensus 173 ~~~~~~l~~~~~-~-~~~iI~De~y~~~~~~~~---~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~ 246 (357)
T PRK14809 173 LDEVEALAERTD-E-ETLVVVDEAYGEFAERPS---AVALVE-ERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYAR 246 (357)
T ss_pred HHHHHHHHHhCc-c-CcEEEEechhhhccCCch---hHHHHh-hCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHH
Confidence 999999999986 4 678999999999876431 122222 2579999999999999999999999999999999887
Q ss_pred HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccC
Q 012124 326 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 405 (470)
Q Consensus 326 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 405 (470)
... .++.+.+.|.++..+|.+ ++++++.++.++++++.+.+.|... + .+.+|+|+|++++
T Consensus 247 ~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~~--------- 306 (357)
T PRK14809 247 VNT--PFAASELACRAGLAALDD----DEHVERTVETARWAREYIREELDAP-T----WESAGNFVLAEVG--------- 306 (357)
T ss_pred hCC--CCCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEECC---------
Confidence 653 456889999999999874 7889999999999999999998653 2 2567888999885
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 406 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 406 ~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+..++++.|. ++||.+.||..|+.+++|||+++. .+++++++++|+++++
T Consensus 307 -----~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 -----DASAVAEAAQ-ERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred -----CHHHHHHHHH-HCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 4668888765 559999999999888999999874 6899999999998875
No 70
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=5e-49 Score=415.96 Aligned_cols=362 Identities=19% Similarity=0.249 Sum_probs=296.1
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al~~~ 170 (470)
+++++|+|+.|+|++++|+.+++++.+.+.... + ..|.+++|++|++++.+.+|++.++ ++|++|+|+++++..+
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~--~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~ll 770 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQN--I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKL 770 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC--C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHH
Confidence 467899999999999999999999998875432 2 3467889999999999999998765 5899999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCCC-CCcccCCCHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPS-NPTGSVYPKNL 248 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~-nPtG~~~s~~~ 248 (470)
+.++++|||.|++++|+|+.|...++..|++++.+|++.+++|.+|++.|++++++ +.+.|++++|+ ||||.++|.++
T Consensus 771 l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~ee 850 (1082)
T PLN02672 771 VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSE 850 (1082)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHH
Confidence 99999999999999999999999999999999999998777899999999999966 45688999996 99999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeccccccccCCCCc--cccc----ccCCC--CCceEEEeccCcccccccceeeEEEcCH-HH
Q 012124 249 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFA----SLPGM--WERTLTVNGFSKAFAMTGWRLGYIAGPK-HF 319 (470)
Q Consensus 249 ~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~--~~~~----~~~~~--~~~~i~i~S~sK~~~~~G~r~G~~~~~~-~~ 319 (470)
+++|+++|++| |++||+||+|+++.|++... .++. .++.. ..++|+++||||.++++|+|+||+++++ ++
T Consensus 851 Le~Llela~k~-di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eL 929 (1082)
T PLN02672 851 IEEILSVCAKY-GARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVL 929 (1082)
T ss_pred HHHHHHHHHHc-CCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHH
Confidence 99999999999 99999999999998875421 1111 12211 2479999999999999999999999865 48
Q ss_pred HHHHHHHhhhccCCCChHHHHHHHHHHh-----cCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeee
Q 012124 320 VAACNKIQSQFTSGASSISQKAGVAALG-----LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 394 (470)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~q~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~ 394 (470)
++.+.+...... +..+.|.++..++. .+.+ .+++++.++.++++++++.+.|++. |+.+..|++|||+|++
T Consensus 930 i~~l~~~~~~s~--~~~~~q~Aaaaalall~~~~~~~-~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~ 1005 (1082)
T PLN02672 930 IDAFHSAPGLSR--PHSTLKYTIKKLLGLKNQKSSDL-LDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAK 1005 (1082)
T ss_pred HHHHHHhhhhcC--CCcHHHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEE
Confidence 888887643322 33445555554442 2222 4678888899999999999999988 8999999999999998
Q ss_pred ccCccCCc--ccCC----CCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 395 FSTYYGSE--AEGF----GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 395 ~~~~~~~~--~~~~----~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
++...+.. .... +...++.++++.|++++||.+.||..|+.++++||+++.+++++++++++|+++.+
T Consensus 1006 l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1006 PSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 75321100 0000 00126788999999888999999998888899999999988999999999998764
No 71
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=2.9e-50 Score=397.19 Aligned_cols=346 Identities=32% Similarity=0.541 Sum_probs=302.1
Q ss_pred CeEEccCCCCCCC----ChHHHHHHHHH--HHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHH
Q 012124 95 SVIRLAAGEPDFD----TPVLIAEAGIN--AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSI 167 (470)
Q Consensus 95 ~~i~l~~g~~~~~----~~~~~~~a~~~--~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al 167 (470)
++|+|+.|+++.. +++++.+++.+ ........|+++.|.++||+++++++.+..|++++++ +|++++|+++++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999999877 45666666655 3334688999999999999999999998889999999 999999999999
Q ss_pred HHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCc
Q 012124 168 LQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPT 240 (470)
Q Consensus 168 ~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPt 240 (470)
..++..+ .++||+|++++|+|+.+...++..|++++.++++.++++.+|++.|++.+++ +++++++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 8899999999999999999999999999999988778889999999999976 67899999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccc-ccccCCCCCceEEEeccCcccccccceeeEEEcCHHH
Q 012124 241 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 319 (470)
Q Consensus 241 G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~ 319 (470)
|.++|.+++++|+++|++| +++||+||+|.++.++.....+ ...++. ..++|+++||||.+|++|+|+||+++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~ 239 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREY-NIIIIVDEAYSDLIFGDPDFGPIRSLLDE-DDNVIVVGSLSKSFGLPGLRVGYIVAPPEL 239 (363)
T ss_dssp TBB--HHHHHHHHHHHHHT-TSEEEEEETTTTGBSSSSHTHHHHGHHTT-TSTEEEEEESTTTTTSGGGTEEEEEEEHHH
T ss_pred ccccccccccchhhhhccc-ccceeeeeceeccccCCCccCcccccccc-cccceeeeeccccccccccccccccchhhh
Confidence 9999999999999999999 9999999999999887543323 333443 456999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCcc
Q 012124 320 VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 399 (470)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~ 399 (470)
++.++.....+.. +.+.|.++..++.+.....++++++++.++++++++.+.|++. |+.+..+.+|+|+|+.++..
T Consensus 240 ~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~- 315 (363)
T PF00155_consen 240 IERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPN- 315 (363)
T ss_dssp HHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHH-
T ss_pred hhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccc-
Confidence 9999988876654 8888998888888632112389999999999999999999988 99999888999999998753
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee-cCHHHHHHHHHHH
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-ASLTTLQAAVERI 457 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~-~~~~~i~~~l~~l 457 (470)
++.+++++|+++.||.+.||..|+.++++|++++ .+++++++++++|
T Consensus 316 -----------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 316 -----------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp -----------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred -----------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 5789999999887999999999999999999994 4999999999986
No 72
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.5e-48 Score=382.06 Aligned_cols=332 Identities=21% Similarity=0.380 Sum_probs=281.0
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.++++|+.|.|+..+|+.+++++.+.+. ....|+ ..+.++||+++++|+ + +++++|++|+|+++++..++.+
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~-~~~~Y~-~~~~~~lr~~ia~~~----~--~~~~~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITENLD-KLVEYP-DPDYLELRKRIASFE----Q--LDLENVILGNGATELIFNIVKV 90 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHHHHH-hhhcCC-CccHHHHHHHHHHHh----C--CChhhEEECCCHHHHHHHHHHH
Confidence 3579999999888889999999998775 367784 557899999999997 3 6889999999999999999988
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
+ .+ +.|++++|+|+.+...++..|++++.++++.++++.+| +.+.+.+.++++++++++||||||.+++.+++++|+
T Consensus 91 ~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~ 167 (354)
T PRK06358 91 T-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKIL 167 (354)
T ss_pred h-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHH
Confidence 6 44 68999999999999999999999999999877778899 666666666899999999999999999999999999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC-HHHHHHHHHHhhhccC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTS 332 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~ 332 (470)
++|+++ +++||+||+|.+|.+++...+.+..++. .+++|+++||||.+|+||+|+||++++ +.+++.+.+... .+
T Consensus 168 ~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--~~ 243 (354)
T PRK06358 168 DKCEKR-NIYLIIDEAFMDFLEENETISMINYLEN-FKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--PW 243 (354)
T ss_pred HHHHhc-CCEEEEeCcccccCCCccchhHHHhccC-CCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CC
Confidence 999999 9999999999999887543333334443 589999999999999999999999985 678888887764 45
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.+.+.|.++..++++ ..++++.++.++++++.+.+.|++++|+.+..|.++ |+|++++ +.
T Consensus 244 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~--------------~~ 304 (354)
T PRK06358 244 SINTFADLAGQTLLDD----KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-FIFFKLE--------------KP 304 (354)
T ss_pred cchHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-EEEEEcC--------------ch
Confidence 6899999999999974 678899999999999999999998888888877665 6899987 34
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
.++++.|+++ ||.+.||..|+. ++++||+++.+ ++.+++++.|++++
T Consensus 305 ~~~~~~l~~~-gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 IDLRKELLKK-GILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHC-CeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 6888888765 999999999953 47899998864 46677777777654
No 73
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.8e-49 Score=386.96 Aligned_cols=334 Identities=21% Similarity=0.339 Sum_probs=283.7
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
.++++|+|+.|+|++++|+.+++++.+.+.. ...| |..|.++||++|++++ | +++++|++|+|+++++.+++
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~-~~~Y-p~~g~~~Lr~aia~~~----~--~~~~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD-HALY-PDGGATTLRQTIANKL----H--VKMEQVLCGSGLDEVIQIIS 98 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh-cCcC-CCCCHHHHHHHHHHHh----C--CCcceEEECCCHHHHHHHHH
Confidence 3457899999999999999999999887654 3456 7789999999999997 3 68899999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
++++++||+|++++|+|+.|...++..|++++.++++ ++++|++.|+++++++++++++++||||||.+++.+++++
T Consensus 99 ~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~ 175 (366)
T PRK01533 99 RAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQ 175 (366)
T ss_pred HHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999985 2359999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhcc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 331 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 331 (470)
|+++|+++ ++ +|+||+|.+|.+.+.....+..++. .+++|+++||||.||++|+|+||+++++++++.+.+... .
T Consensus 176 l~~~~~~~-~~-~iiDe~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~--~ 250 (366)
T PRK01533 176 FIEGISEN-TL-IVIDEAYYEYVTAKDFPETLPLLEK-HKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL--P 250 (366)
T ss_pred HHHhCCCC-CE-EEEEccHHHhhccccCcchhHHhcc-CCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC--C
Confidence 99999887 65 5669999988765322222222332 579999999999999999999999999999999988763 4
Q ss_pred CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC
Q 012124 332 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 332 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
++.+.+.|.++.++|++ .++.++.++.++++++.+.+.++.+ |+.+.++. |.|+|++++ +
T Consensus 251 ~~~~~~~q~aa~~~l~~----~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~~~-~nf~~~~~~--------------~ 310 (366)
T PRK01533 251 FNVSSLAQKAATIAFGD----DEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQSQ-TNFIFLPVE--------------N 310 (366)
T ss_pred CCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCc-CcEEEEeCC--------------C
Confidence 67999999999999975 6788888888889999998888877 78887775 456999886 4
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCCCC
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPGV 468 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~~~ 468 (470)
..++.+.|++ +||.|++ | ++++||+++.. ++++.+++.|+++++..++..
T Consensus 311 ~~~~~~~l~~-~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~~~~~ 360 (366)
T PRK01533 311 GGEIYEACAH-AGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENKKRKS 360 (366)
T ss_pred HHHHHHHHHH-CCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhccccc
Confidence 5678888875 5999997 4 58899998854 678899999999888776643
No 74
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.4e-48 Score=389.96 Aligned_cols=363 Identities=17% Similarity=0.184 Sum_probs=273.1
Q ss_pred ccccCCchHHHHHHHHHHHHhcCCCeEEccCCC-CCCCChH----HHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHH
Q 012124 71 VNAVKPSKTVAITDQATALAQAGVSVIRLAAGE-PDFDTPV----LIAEAGINAIREG-FTRYTPNAGTLELRSAICHKL 144 (470)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~----~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l 144 (470)
....+...+..+.+.... ..+...++|+.|. |+...++ .+.++....+..+ ..+|+++.|.++||+++++|+
T Consensus 27 ~~~~~~~~i~~~~~~~~~--~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~ 104 (423)
T PLN02397 27 VEPAPPDPILGVTEAFLA--DPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLA 104 (423)
T ss_pred CCcCCCChHHHHHHHHhh--CCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHH
Confidence 334444444444433322 1344678999986 6655444 3444443333333 457999999999999999999
Q ss_pred HHHcCCCCCCCcE-----EEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHh
Q 012124 145 KEENGLSYTPDQI-----LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 219 (470)
Q Consensus 145 ~~~~g~~~~~~~i-----~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 219 (470)
.+..+...++++| ++++|+.+ +...+..++.|||+|++++|+|+.|...++..|++++.+|+..++++++|++.
T Consensus 105 ~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~ 183 (423)
T PLN02397 105 YGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDG 183 (423)
T ss_pred cCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHH
Confidence 6543333333343 33444443 33344445579999999999999999999999999999998544457899998
Q ss_pred Hhhhcc---CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC--CcccccccCCCCCceE
Q 012124 220 LESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTL 294 (470)
Q Consensus 220 l~~~l~---~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~--~~~~~~~~~~~~~~~i 294 (470)
+++.+. ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.+|.|++. ...++..+....+++|
T Consensus 184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~-~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI 262 (423)
T PLN02397 184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSK-NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEIL 262 (423)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEE
Confidence 887774 4677888899999999999999999999999999 999999999999998641 2334444433346799
Q ss_pred EEeccCcccccccceeeEEE--c-CHHHHH----HHHHHhhhccCCCChHHHHHHHHHHhcCCCChHH---HHHHHHHHH
Q 012124 295 TVNGFSKAFAMTGWRLGYIA--G-PKHFVA----ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKAFR 364 (470)
Q Consensus 295 ~i~S~sK~~~~~G~r~G~~~--~-~~~~~~----~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~---~~~~~~~~~ 364 (470)
+++||||+++++|+|+||++ + ++++++ .+.+.......+++.+.|.++..+|+++.+.+.+ ++++++.|+
T Consensus 263 ~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 342 (423)
T PLN02397 263 VAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRII 342 (423)
T ss_pred EEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999984 4 666544 3444444455678889999999999864221233 788899999
Q ss_pred HHHHHHHHHhccCCC----CeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012124 365 ERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 440 (470)
Q Consensus 365 ~~~~~l~~~L~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iR 440 (470)
++++.+.+.|+++ | +.+..|++|||+|++++ .+++++|++++||.+.++ + |
T Consensus 343 ~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~~~Ll~~~~V~v~~~------~--R 397 (423)
T PLN02397 343 SMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQVDRMTKEYHIYMTRD------G--R 397 (423)
T ss_pred HHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHHHHHHHhCCEEECCC------C--e
Confidence 9999999999987 5 77778999999999873 248889999999999743 2 9
Q ss_pred EEeec-CHHHHHHHHHHHHHHHH
Q 012124 441 ISYAA-SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 441 ls~~~-~~~~i~~~l~~l~~~l~ 462 (470)
++++. +.+++++++++|+++++
T Consensus 398 i~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 398 ISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEEeeCCHHHHHHHHHHHHHHHh
Confidence 99985 99999999999999985
No 75
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-48 Score=381.00 Aligned_cols=330 Identities=23% Similarity=0.336 Sum_probs=283.2
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.++++|+.|+|++.+++.+.+++.+.+.. ..|.+..|.++||+++++++ + +++++|++|+|+++++..++++
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~~p~~g~~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIAAHLDE--LALYPDGYAPELRTKVAKHL----G--VDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcHHHHHHHHHHHh----C--CCHHHEEECCCHHHHHHHHHHH
Confidence 36799999999988888899999887754 34557789999999999997 3 5789999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
++++||.|++++|+|+.+...+...|++++.+|++ ++++|++.+++.++++++++++++||||||.+++.+++.+++
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~ 177 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFL 177 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999986 345899999999988999999999999999999999999998
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
+.|+ + +++||+||+|.++.+++.....+..++. .+++|+++||||.+|++|+|+||+++++++++.+...... ++
T Consensus 178 ~~~~-~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--~~ 252 (359)
T PRK03158 178 ESVP-S-HVLVVLDEAYYEYVTAEDYPDTLPLLEK-YENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--FN 252 (359)
T ss_pred HhCC-C-CcEEEEECchHhhcCCcccccHHHHHHh-cCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--CC
Confidence 8874 7 8999999999998876432233233333 5789999999999999999999999999999999877653 56
Q ss_pred CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHH
Q 012124 334 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
++.+.|.++..+|++ .+++++.++.++++++.+.+.|.+. |+.+.+ .+|+|+|++++. +..
T Consensus 253 ~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~-~~g~~i~~~~~~-------------~~~ 313 (359)
T PRK03158 253 TTRIAQYAAIAALED----QAFLKECVEKNAEGLEQYYAFCKEY-GLFYYP-SQTNFIFVDTGR-------------DAN 313 (359)
T ss_pred CCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeeCC-CcCcEEEEECCC-------------CHH
Confidence 899999999999975 6788888888999999999999888 777764 457789998852 577
Q ss_pred HHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 414 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 414 ~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
++++.|+++ ||.+.||..|+.++++||+++ +.+++++++++|+++
T Consensus 314 ~~~~~l~~~-gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 314 ELFEALLKK-GYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHC-CeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 899988764 999999999987899999998 566788888888765
No 76
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-47 Score=380.26 Aligned_cols=349 Identities=19% Similarity=0.250 Sum_probs=274.1
Q ss_pred EEccCCCCCCCChHHHHHHHHHHHH----cCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCC---CCcEEEecChHHHHHH
Q 012124 97 IRLAAGEPDFDTPVLIAEAGINAIR----EGFTRYTPNAGTLELRSAICHKLKEENGLSYT---PDQILVSNGAKQSILQ 169 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~---~~~i~it~g~~~al~~ 169 (470)
++.+.|.-.-+..+.+.+++.+.+. ...++|++++|.++||+++++++.+..+. .. .++|++|+|+++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~-~~~~~~~~I~it~G~~~al~~ 84 (388)
T PRK08637 6 YNATIGMATEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPS-LSGKKMSLPIVTNALTHGLSL 84 (388)
T ss_pred eecceeeEecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcc-ccccccceeeEccchHHHHHH
Confidence 5555554322222233334433333 34688999999999999999999875432 33 2689999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCCCcccCC
Q 012124 170 AVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVY 244 (470)
Q Consensus 170 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~nPtG~~~ 244 (470)
++.++++|||.|++++|+|+.|...+. ..|++++.+|+..+ ++++|++.+++.++ +..+++++++||||||.++
T Consensus 85 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~ 163 (388)
T PRK08637 85 VADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTP 163 (388)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC
Confidence 999999999999999999999998765 68999999998422 34589999998876 3445566799999999999
Q ss_pred CHHHHHHHHHHHHh-----CCCEEEEEeccccccccCCCCcccc-cccCCCCCce--EEEeccCcccccccceeeEEEcC
Q 012124 245 PKNLLDEIARIVAK-----HPRLLVLSDEIYEHIIYAPATHTSF-ASLPGMWERT--LTVNGFSKAFAMTGWRLGYIAGP 316 (470)
Q Consensus 245 s~~~~~~l~~~~~~-----~~~~~iI~Dd~~~~~~~~~~~~~~~-~~~~~~~~~~--i~i~S~sK~~~~~G~r~G~~~~~ 316 (470)
|.+++++|+++|++ | +++||+||+|.++.|++...+++ ..+.+..+++ ++++||||.+++||+|+||++++
T Consensus 164 s~~~~~~l~~~~~~~~~~~~-~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 164 TEKEATAIVEAIKELADAGT-KVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred CHHHHHHHHHHHHHHHhcCC-cEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 99999999998875 8 99999999999999876544443 2333334575 45679999998999999999854
Q ss_pred ------HHHHHHHHHHh----hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC---CCCeec
Q 012124 317 ------KHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMS 383 (470)
Q Consensus 317 ------~~~~~~l~~~~----~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~ 383 (470)
+++++.+.+.. .....++|.+.|.++..+|.++.+ ..++++.+..++++++.+.+.|++. +++.+.
T Consensus 243 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~ 321 (388)
T PRK08637 243 TKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAY 321 (388)
T ss_pred cccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc
Confidence 67777775421 223347899999999999987654 6677888888999999999988764 257888
Q ss_pred CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 012124 384 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 384 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~-~~~~i~~~l~~l~~~l~ 462 (470)
+|.+|||+|+++++. ++.+++++|++++||.+.+. .++++||+++. +++++++++++|+++++
T Consensus 322 ~~~~g~~~~~~l~~~------------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 322 PFNSGYFMCLKLKGV------------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred cccceEEEEecCChH------------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 899999999999743 67889998877779988752 35789999998 89999999999999998
Q ss_pred hhC
Q 012124 463 TLR 465 (470)
Q Consensus 463 ~~~ 465 (470)
+++
T Consensus 386 ~~~ 388 (388)
T PRK08637 386 DLR 388 (388)
T ss_pred hcC
Confidence 654
No 77
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.3e-47 Score=375.13 Aligned_cols=328 Identities=20% Similarity=0.299 Sum_probs=269.4
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.++|+|+.|.+++.+|+.+++++.+.+.. ...|+++ +..+||++|++++ + +++++|++|+|++++|.+++++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~-~~~Y~~~-~~~~Lr~aia~~~----~--v~~~~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA-LRHYPDP-DYRELRLALAQHH----Q--LPPEWILPGNGAAELLTWAGRE 93 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH-hhcCCCc-CHHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHHH
Confidence 36799999999999999999998887764 6779654 5689999999998 3 6889999999999999999988
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCC---ccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF---LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+. +||.|++++|+|+.+...++..|++++.++++.++++ ..+++.+++.. ++++++++++||||||.+++. +
T Consensus 94 l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~---~ 168 (360)
T PRK07392 94 LA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSR---E 168 (360)
T ss_pred hC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCH---H
Confidence 65 7899999999999999999999999999999766554 34667776553 467889999999999999995 4
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|.++++++ ++ +|+||+|.+|.+++. ..++.......+++|+++||||.||++|+|+||+++++++++.+.+...
T Consensus 169 ~l~~l~~~~-~~-~IiDE~y~~~~~~~~-~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~-- 243 (360)
T PRK07392 169 AILPLLEQF-AL-VVVDEAFMDFLPPDA-EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD-- 243 (360)
T ss_pred HHHHHHHHC-CE-EEEECchhhhccCcc-ccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC--
Confidence 566667788 86 555999999987653 2333222223578999999999999999999999999999998876553
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.++++.+.|.++..+|++ ..+.+..++.++++++.+.+.|++++|+.+. +.+++|+|++++.
T Consensus 244 ~~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~------------- 305 (360)
T PRK07392 244 PWPVNGLAAAAAIAALAD----RDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG------------- 305 (360)
T ss_pred CCCCCHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-------------
Confidence 456899999999999985 5677777888999999999999988888775 4778899998863
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecC--HHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAAS--LTTLQAAVERI 457 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~--~~~i~~~l~~l 457 (470)
++.++++++++++||.+.||..|+. ++++||+++.. .+++.++++++
T Consensus 306 ~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 306 SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 5678888877777999999999964 47999999983 35666666654
No 78
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-46 Score=370.59 Aligned_cols=365 Identities=26% Similarity=0.406 Sum_probs=302.0
Q ss_pred cCCchHHHHHHHHHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHHHHHcCCCC
Q 012124 74 VKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSY 152 (470)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~g~~~ 152 (470)
+++.....+........ ++.++|+|+.|.+.+++++.+.+++.+.+... ...|+++.|.++||+++++++ | +
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~--~ 81 (380)
T PRK06225 9 VPPSGFKTSNEFFDYVF-KDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----G--L 81 (380)
T ss_pred cCcchhhhHHHHHHHHh-hcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----C--C
Confidence 34443334433333332 34579999999999988999999999998753 567988899999999999986 4 5
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcC-CCCCccCHHhHhhhccCCceEE
Q 012124 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKLTEKSRLL 231 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~i 231 (470)
++++|++|+|+++++..++.+++.+||+|++++|+|..+...++..|++++.++++. ++++.+|++.+++.++++++++
T Consensus 82 ~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v 161 (380)
T PRK06225 82 DDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLI 161 (380)
T ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEE
Confidence 778999999999999999999999999999999999999999999999999999853 3467899999999998899999
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceee
Q 012124 232 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 311 (470)
Q Consensus 232 ~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G 311 (470)
++++|+||||.++|.+++++|+++|+++ |++||+||+|.+|..+. .+...++ .++++++.||||.+|++|+|+|
T Consensus 162 ~l~~p~NptG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~---~~~~~~~--~~~~i~~~s~SK~~g~~G~RiG 235 (380)
T PRK06225 162 YLIDPLNPLGSSYTEEEIKEFAEIARDN-DAFLLHDCTYRDFAREH---TLAAEYA--PEHTVTSYSFSKIFGMAGLRIG 235 (380)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHC-CcEEEEehhHHHHhccC---CchhhcC--CCCEEEEeechhhcCCccceeE
Confidence 9999999999999999999999999999 99999999998865432 2222333 3789999999999998999999
Q ss_pred EEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-cCCCceEE
Q 012124 312 YIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFY 390 (470)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~ 390 (470)
|+++++++++.+..... ...+.+.+.|.++...+.. ...+.+++++.++++++.+.+.|++++|+.+ ..|.+|+|
T Consensus 236 ~i~~~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 236 AVVATPDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV---KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred EEecCHHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 99999999998877643 4567889999999888875 3677888888899999999999988767543 24556777
Q ss_pred EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012124 391 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~ 466 (470)
+|++++... .+..++++.|.+ +||.+.||..|+. ++++|++++.+++++++++++|+++++++++
T Consensus 312 ~~~~~~~~~----------~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 312 MVIDISEAG----------IDPEDLVEYLLE-RKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred EEEEccccc----------CCHHHHHHHHHH-CCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 899986420 167889988875 5999999976643 4699999999999999999999999998774
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-47 Score=375.63 Aligned_cols=333 Identities=23% Similarity=0.319 Sum_probs=276.6
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
.+.++|+|+.|.|++.+++.+.+++.+... ....|++..|. +||+++++++ | +++++|++|+|+++++..++
T Consensus 34 ~~~~~i~l~~~~~~~~~~~~~~~al~~~~~-~~~~Y~~~~g~-~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~ 105 (371)
T PRK05166 34 GVPRIAKLGSNENPLGPSPAVRRAFADIAE-LLRLYPDPQGR-ALREAIAART----G--VPADRIILGNGSEDLIAVIC 105 (371)
T ss_pred CCcceEEcCCCCCCCCCCHHHHHHHHHHHH-HhhcCCCCcHH-HHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHH
Confidence 345789999999988888889998887543 36789888884 9999999986 3 47889999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
.+++++||.|++++|+|+.+...++..|++++.++++. ++++|++.+++.++++++++++++||||||.++|.+++++
T Consensus 106 ~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 183 (371)
T PRK05166 106 RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLAR 183 (371)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999864 3569999999999888999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccc-cCCCCCceEEEeccCcccccccceeeEEEc-CHHHHHHHHHHhhh
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ 329 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~ 329 (470)
|+++|+ + +++||+||+|.++.+++. .+++.. +....+++|+++||||.||++|+|+||+++ ++++++.+.+.+.
T Consensus 184 l~~~~~-~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~- 259 (371)
T PRK05166 184 VLDATP-P-ETLIVVDEAYAEYAAGDD-YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT- 259 (371)
T ss_pred HHHhCC-C-CcEEEEECcHHHhcCCcC-cccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc-
Confidence 999986 4 688999999999886432 233322 333246899999999999999999999775 7888888877654
Q ss_pred ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCC
Q 012124 330 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 409 (470)
Q Consensus 330 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (470)
.++++.+.|.++..++.+ .+++++.++.++++++.+.+.|++. |+.+. |.+|+|+|++++.
T Consensus 260 -~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~------------ 320 (371)
T PRK05166 260 -PFNVNGAAQAAALAALDD----EEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR------------ 320 (371)
T ss_pred -CCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC------------
Confidence 356899999888888874 6789999999999999999999988 77764 5667889998753
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 410 ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 410 ~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
++.++++.|+++ ||.+.||..++.++++||+++.. ++.+.+++.|+.+
T Consensus 321 -~~~~l~~~l~~~-gi~v~p~~~~~~~~~iRi~~~~~-~~~~~l~~~l~~i 368 (371)
T PRK05166 321 -PASAVAEALLRQ-GVIVKPWKQPGFETFIRVSIGSP-EENDHFVAALDKV 368 (371)
T ss_pred -CHHHHHHHHHHC-CeEEecCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHH
Confidence 567899988865 99999998777789999999972 3344444444433
No 80
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=8.2e-47 Score=370.51 Aligned_cols=334 Identities=19% Similarity=0.265 Sum_probs=275.7
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
++.++++|+.|+|++++|+.+.+++.+.+.. ...|+ ..+..+||++|++++ + +++++|++|+|+++++..++
T Consensus 18 ~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~~~y~-~~~~~~lr~~ia~~~----~--~~~~~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 18 SPDQLLDFSANINPLGMPVSLKRAIIDNLDC-AERYP-DVEYRHLHQALARHH----Q--VPASWILAGNGETESIFAVV 89 (356)
T ss_pred ChhhEEEeccccCCCCCCHHHHHHHHHHHHh-cccCc-CccHHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHH
Confidence 4567899999999999999999999887754 45684 457899999999996 3 57899999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
.++ .+|+ +++.+|+|..+...++..|++++.+|++.++++.+| +.+++.+.++++++++++||||||.+++.+++++
T Consensus 90 ~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~ 166 (356)
T PRK08056 90 SGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQA 166 (356)
T ss_pred HHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHH
Confidence 886 6776 677899999999999999999999999766677677 4455666788999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC-HHHHHHHHHHhhhc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF 330 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~ 330 (470)
|+++|+++ +++||+||+|.++.+++....+. +.. .+++++++||||.+|++|+|+||++++ +++++.+.+...
T Consensus 167 i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~--~~~-~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~-- 240 (356)
T PRK08056 167 IAERCKSL-NIALILDEAFIDFIPDETGFIPQ--LAD-NPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM-- 240 (356)
T ss_pred HHHHHHhc-CCEEEEecchhccCCcchHHHHH--hcc-CCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--
Confidence 99999999 99999999999987754322222 222 468999999999999999999999984 678787776543
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.++++.+.|.++..+++. ..+.+++++.++++++.+.+.|++++++.+.++ +++|+|++++.
T Consensus 241 ~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~------------- 302 (356)
T PRK08056 241 PWSINAFAALAGEVILQD----RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER------------- 302 (356)
T ss_pred CCchhHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC-------------
Confidence 456788899988888864 678888999999999999999998888877655 57889999874
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+..++++.|++ +||.+.+|..|.. ++++||+++. .++.+.+++.|+++++
T Consensus 303 ~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 PDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVLT 354 (356)
T ss_pred ChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHHc
Confidence 45678888876 5999999998843 4699999985 4566677777766643
No 81
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-47 Score=372.75 Aligned_cols=334 Identities=26% Similarity=0.378 Sum_probs=280.5
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHc---CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
..++|+.|+|++++|+.+++++.+.+.. ....| +..|.++||++|++|+.+.+|+++++++|++|+|+++++.+++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~ 105 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL 105 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence 3599999999999999999999988753 35678 5578999999999999998898899999999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-CCceEEEEcCCCCCcccCCCHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+++++|||.|++++|+|+.+...++..|.+++.++.+ +++++|++.++++++ ++++++++++||||||.+++.++++
T Consensus 106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~ 183 (368)
T PRK03317 106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVE 183 (368)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999988864 457799999999986 4789999999999999999988777
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++| +++||+||+|.+|.+.+. .+...+.+..+++|+++||||.+|++|+|+||+++++++++.+.....
T Consensus 184 ~l~~~~----~~~lI~DE~y~~~~~~~~--~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~-- 255 (368)
T PRK03317 184 AILDAA----PGIVVVDEAYAEFRRSGT--PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL-- 255 (368)
T ss_pred HHHHHC----CceEEEeCCchhhcccCC--cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC--
Confidence 777655 589999999999876542 232233222468999999999999899999999999999999887653
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.++.+++.|.++.++|+. .+...+.++.++++++.+.+.|++. |+.+..+.++|++|.+++
T Consensus 256 ~~~~s~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-------------- 316 (368)
T PRK03317 256 PYHLSAVTQAAARAALRH----ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA-------------- 316 (368)
T ss_pred CCCCCHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC--------------
Confidence 457899999999999975 3334455567888999999999887 888888899998886653
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
+..++.+.|+++ ||.+.+. +.++++|++++ +.++++.+++.|+++++.
T Consensus 317 ~~~~~~~~l~~~-Gv~v~~~---~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 DRHAVWQGLLDR-GVLIRDV---GIPGWLRVTIG-TPEENDAFLAALAEVLAT 364 (368)
T ss_pred CHHHHHHHHHHC-CEEEEeC---CCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 567788887754 9999874 44689999998 456789999999888754
No 82
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-46 Score=370.83 Aligned_cols=328 Identities=24% Similarity=0.301 Sum_probs=272.1
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
.+.++|+|+.|++++++|+.+.+++.+.. ....| +..+..+||++|++++. +++++|++|+|+++++..++
T Consensus 50 ~~~~~i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~~t~Ga~~~i~~~~ 120 (380)
T PLN03026 50 KPEDIVKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPESRRLRAALAEDSG------LESENILVGCGADELIDLLM 120 (380)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCHHHHHHHHHHHhC------cChhhEEEcCCHHHHHHHHH
Confidence 35688999999999988888888876531 23457 45678999999999973 57899999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhc-cCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l-~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
.+++++||+|++++|+|+.|...++..|++++.++.+ +++.+|++.+++++ ++++++|++++||||||.+++.++++
T Consensus 121 ~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~ 198 (380)
T PLN03026 121 RCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLL 198 (380)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999985 35679999999998 67899999999999999999988887
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++ .++||+||+|.+|.+.+. ....+. ..+++|+++||||.||++|+|+||+++++++++.+.+.+..
T Consensus 199 ~l~~~-----~~~vi~DeaY~~~~~~~~---~~~~~~-~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~- 268 (380)
T PLN03026 199 KILEL-----PILVVLDEAYIEFSTQES---RMKWVK-KYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 268 (380)
T ss_pred HHHhc-----CCEEEEECcchhhcCCcc---hHHHHH-hCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCC-
Confidence 77753 379999999999876431 112222 25899999999999999999999999999999999887654
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
++.+.+.|.++.++|++ .+++++.++.++++++.+.+.|++++++.+ .|.+++|+|+++++..
T Consensus 269 -~~~~~~~q~aa~~aL~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~----------- 331 (380)
T PLN03026 269 -YNVSVAAEVAACAALSN----PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGR----------- 331 (380)
T ss_pred -CCCCHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCC-----------
Confidence 45889999999999975 678899999999999999999998854555 5677888999987532
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
+..++++.|++ +||.+.++..++.++++||+++. .++++.+++.|++
T Consensus 332 ~~~~~~~~l~~-~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~ 378 (380)
T PLN03026 332 DAKKLKEDLAK-MGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ 378 (380)
T ss_pred CHHHHHHHHHH-CCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence 67889988885 59999998776667899999995 3455555555543
No 83
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-46 Score=367.80 Aligned_cols=328 Identities=21% Similarity=0.333 Sum_probs=274.6
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
+++|+|+.|+|++++++.+.+++.+.+......|+ +.|..+||++|++++. +++++|++|+|++++|.+++++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~~lr~aia~~~~------~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNADALRQAIAAYYG------LDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHHHHHHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHH
Confidence 46799999999998888999999988776667885 4577999999999973 6889999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
+++|||+|++++|+|+.+...++..|++++.++++ +++.+|++.+++ .++++++++||||||.++|.+++++|+
T Consensus 97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~ 170 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERIL 170 (353)
T ss_pred hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999985 346799999874 457889999999999999999999998
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc-cC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-TS 332 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-~~ 332 (470)
+++ + +++||+||+|.++ .+....++. . ..+++++++||||.+|++|+|+||+++++++++.+....... .+
T Consensus 171 ~~~--~-~~~livDe~y~~~--~~~~~~~~~--~-~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~ 242 (353)
T PRK05387 171 AAN--P-DSVVVIDEAYVDF--GGESAIPLI--D-RYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSY 242 (353)
T ss_pred HhC--C-CcEEEEeCccccc--CCcchHHHH--h-hCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCC
Confidence 864 4 7999999999875 332222222 2 247899999999999999999999999999999998876543 45
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.+.+.|.++..++.+ .++.++.++.++++++.+.+.|+++ |+.+. |.+++|+|++++.. ++
T Consensus 243 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~ 304 (353)
T PRK05387 243 PLDRLAQAGAIAAIED----EAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH------------DA 304 (353)
T ss_pred CcCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC------------CH
Confidence 6889999999999874 5678888999999999999999988 78765 55677899998753 67
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
.++++.|.++ ||.+.+......++++|++++ +++++++++++|++++.
T Consensus 305 ~~~~~~l~~~-gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 305 AELAAKLRER-GIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHC-CEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 8899988655 999975332233579999998 56889999999998765
No 84
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-46 Score=367.03 Aligned_cols=337 Identities=23% Similarity=0.301 Sum_probs=282.9
Q ss_pred cCCC-eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 92 AGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~-~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
.|.+ .++|+.|+|++++|+.+.+++.+... ....|+++ +..+||++|++++ + +++++|++|+|+++++..+
T Consensus 29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~-~~~~Lr~~ia~~~----~--~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 29 RGRPFRARIGANESGFGPSPSVIAAMREAAA-EIWKYGDP-ENHDLRHALAAHH----G--VAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred cCCcceeEecCCCCCCCCCHHHHHHHHHHHH-HhhcCCCC-ccHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHH
Confidence 4554 46999999999999999999888764 34678655 5899999999997 3 5889999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhc-cCCceEEEEcCCCCCcccCCCHHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLL 249 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l-~~~~~~i~l~~p~nPtG~~~s~~~~ 249 (470)
+.++++|||.|++++|+|+.+...++..|++++.+|++.+ .+|++.+++.+ +++++++++++||||||.++|.+++
T Consensus 101 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l 177 (369)
T PRK08153 101 VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADI 177 (369)
T ss_pred HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999999999999999999998543 37999998776 4688999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhh
Q 012124 250 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 329 (470)
Q Consensus 250 ~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~ 329 (470)
++|+++|+ + +++||+||+|.++.+++. ..+ +....+++|+++||||.+|+||+|+||+++++++++.+.+....
T Consensus 178 ~~l~~~~~-~-~~~lI~DE~y~~~~~~~~-~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~ 251 (369)
T PRK08153 178 VAFIEALP-E-TTLLVLDEAYCETAPAGA-APP---IDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH 251 (369)
T ss_pred HHHHHhCC-C-CcEEEEeCchhhhcCccc-chh---hhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC
Confidence 99999886 6 789999999999877542 222 22224689999999999999999999999999999999887654
Q ss_pred ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCC
Q 012124 330 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 409 (470)
Q Consensus 330 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 409 (470)
++.+.+.|.++..+|++ .+++++.++.++++++.+.+.|++. |+.+. |.+++|+|++++...
T Consensus 252 --~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~---------- 313 (369)
T PRK08153 252 --FGMNRIAQAAALAALKD----QAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDG---------- 313 (369)
T ss_pred --CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCc----------
Confidence 56899999999999974 6788899999999999999999877 77654 677888999885310
Q ss_pred CCHHHHHHHHHHcCCEEEE-CCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012124 410 ENSESLCRYLLDKAQVALV-PGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 410 ~~~~~l~~~L~~~~gI~v~-pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~ 466 (470)
....++.++|.++ ||.+. |+.. ..++++|++++ ++++++.+++.|+++++.+++
T Consensus 314 ~~a~~l~~~l~~~-Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 314 AFARAVLDGLIAR-DIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred ccHHHHHHHHHHC-CeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 1567888888765 99995 6643 23579999999 678999999999999887664
No 85
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.5e-46 Score=366.94 Aligned_cols=336 Identities=25% Similarity=0.409 Sum_probs=286.7
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
.+.++++|+.|.+++.+++.+.+++.+.+.. ...|++.. ..+||+++++++ | +++++|++|+|+++++..++
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~~-~~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~ 101 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDGS-GFELKAALAEKF----G--VDPERIILGNGSDEILELLA 101 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCc-HHHHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHH
Confidence 5668899999998888888899999888754 67786544 479999999987 3 57789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
.+++++||+|++++|+|..+...++..|++++.++. +++++|++.+++.+++++++|++++||||||.+++.+++++
T Consensus 102 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 178 (367)
T PRK02731 102 RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVER 178 (367)
T ss_pred HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHH
Confidence 999999999999999999998888999999999997 34669999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhcc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 331 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 331 (470)
+++.|+ + +++||+||+|.++.+++....++..++ ..+++++++||||.+|++|+|+||+++++++++.+.+....
T Consensus 179 l~~~~~-~-~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~-- 253 (367)
T PRK02731 179 FLAGVP-P-DVLVVLDEAYAEYVRRKDYEDGLELVA-KFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQP-- 253 (367)
T ss_pred HHHhCC-C-CcEEEEECcHHHhccCcCcccHHHHHh-hcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCC--
Confidence 999875 7 899999999999887553333332232 25789999999999998999999999999999998876653
Q ss_pred CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC
Q 012124 332 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 332 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
++.+.+.|.++..+|++ ..++++.++.++++++.+.+.|++. |+.+. +.+|+|+|++++... +
T Consensus 254 ~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~-----------~ 316 (367)
T PRK02731 254 FNVNSLALAAAVAALDD----DAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK-----------D 316 (367)
T ss_pred CCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC-----------C
Confidence 45688999999999974 6788999999999999999999988 78776 455788999996542 7
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+.++++.|.++ ||.+.|+..|+.++++|++++ +.++++.+++.|+++++
T Consensus 317 ~~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 317 AAEAYQALLKR-GVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHC-CEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 78899988765 999999998876789999998 56788999999988765
No 86
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2e-45 Score=361.48 Aligned_cols=325 Identities=20% Similarity=0.271 Sum_probs=273.0
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
+++++|+.|+|++++|+.+.+++.+.+.. ...|+++ +..+||++|++++ | +++++|++|+|+++++.+++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~-~~~~Lr~aia~~~----~--v~~e~I~it~Gs~~ai~~~~~~ 114 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-SGRYDLE-LEDDLRTLFAAQE----G--LPADHVMAYAGSSEPLNYAVLA 114 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCc-hHHHHHHHHHHHh----C--cChhhEEEcCChHHHHHHHHHH
Confidence 35799999999999999999999887753 3568544 5899999999875 4 5889999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
++++||+|++++|+|+.+...++..|++++.++.+. ++.+|++.+++. .++++++++++||||||.++|.+++++++
T Consensus 115 l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~ 191 (370)
T PRK09105 115 FTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLL 191 (370)
T ss_pred HcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 999999999999999999999999999999999864 466899999887 45789999999999999999999999999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
+.+ ++ +++||+||+|.+|... ++..++....+++++++||||.+|++|+|+||+++++++++.+... ....
T Consensus 192 ~~~-~~-~~~lIvDEaY~~f~~~----~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~---~~~~ 262 (370)
T PRK09105 192 ANK-PA-GSVLLVDEAYIHFSDA----PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF---GHNP 262 (370)
T ss_pred HhC-CC-CcEEEEECchHHhccC----cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc---CCCC
Confidence 975 56 8999999999875421 2333443335789999999999999999999999999999988776 2344
Q ss_pred CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHH
Q 012124 334 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
.+.+.|.++..+|.+ .+|+++.++.++++++.+.+.|+++ |+.+.++.++|| |++++. +..
T Consensus 263 ~~~~~~~aa~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~-~~~~~~-------------~~~ 323 (370)
T PRK09105 263 LPVPAAAAGLASLRD----PKLVPQRRAENAAVREDTIAWLKKK-GYKCTPSQANCF-MVDVKR-------------PAK 323 (370)
T ss_pred cCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEE-EEeCCC-------------CHH
Confidence 788889999988875 6789999999999999999999987 888888888876 567752 678
Q ss_pred HHHHHHHHcCCEEEECCCCCC-CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 414 SLCRYLLDKAQVALVPGDAFG-DDTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 414 ~l~~~L~~~~gI~v~pg~~f~-~~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
++++.|+++ ||.+ |..|. .++++|++++. +++++.+++.|++++
T Consensus 324 ~l~~~L~~~-gI~v--~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 324 AVADAMAKQ-GVFI--GRSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHC-CcEE--ecCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 899999876 9988 33453 36899999995 566788887777665
No 87
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-45 Score=359.40 Aligned_cols=327 Identities=22% Similarity=0.374 Sum_probs=272.5
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
+.++++|+.|+|++++|+.+++++.+.+.. ....|++ .|..+||+++++++. .. ..++|++|+|+++++.+++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~----~~-~~~~I~~t~G~~~~i~~~~ 98 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG----VP-AGADVLLGNGSDELIQLLA 98 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC----cC-CCCcEEEcCCHHHHHHHHH
Confidence 347899999999999999999999998864 4577855 688999999999973 32 2358999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-CCceEEEEcCCCCCcccCCCHHHHH
Q 012124 172 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 172 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
.+++++||+|++++|+|+.+...++..|++++.+++++ ++.+|++.+++++. .+++++++++||||||.++|.++++
T Consensus 99 ~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 176 (356)
T PRK04870 99 LACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVE 176 (356)
T ss_pred HHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999863 46799999999985 5899999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+++| + .++|+||+|.+|.+.. ..+ .+.. .+++++++|||| ++++|+|+||+++++++++.+...+.
T Consensus 177 ~i~~~~--~--~~ii~De~y~~~~~~~-~~~---~~~~-~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~-- 244 (356)
T PRK04870 177 RIIEAA--P--GLVVVDEAYQPFAGDS-WLP---RLAR-FPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRP-- 244 (356)
T ss_pred HHHHHC--C--CEEEEECCchhhcCcc-hHH---HHhh-CCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccC--
Confidence 999988 4 4788899999875431 111 1222 468999999999 78899999999999999999887663
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.++.+.+.|.++..++++ .+++++.++.++++++.+.+.|++++|+.+. +.+|+|+|++++
T Consensus 245 ~~~~~~~~q~~a~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~-------------- 305 (356)
T PRK04870 245 PYNVNVLTQATALFALEH----VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP-------------- 305 (356)
T ss_pred CCcCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--------------
Confidence 345888999998888874 4568888899999999999999988888765 556778999886
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
+..++.+.|. ++||.|.||..|+. ++++|++++. .++++.+++.|+++
T Consensus 306 ~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 DAAAVFDGLK-TRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred CHHHHHHHHH-HCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 3456777665 55999999998853 5799999995 56677777777654
No 88
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=341.70 Aligned_cols=332 Identities=23% Similarity=0.288 Sum_probs=275.6
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHHcC-CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEE
Q 012124 124 FTRYTPNAGTLELRSAICHKLKEENG-LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 202 (470)
Q Consensus 124 ~~~y~~~~g~~~lr~~ia~~l~~~~g-~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 202 (470)
.++|++..|.++|+..|.++....+. ....+-+|++|+|.+++++.+++.++++||.|+++.++|++.....+..|+++
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ 172 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI 172 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence 47899999999999999997652232 23344599999999999999999999999999999999999999999999999
Q ss_pred EEecCcCCCCCccCHHhHhhhccC---------CceEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc
Q 012124 203 VILPTRISENFLLDPKVLESKLTE---------KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272 (470)
Q Consensus 203 ~~v~~~~~~~~~~d~~~l~~~l~~---------~~~~i~-l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~ 272 (470)
++|+++.++ +++|.|++.+.. ++++++ |++.|||||.+++.+++++|.++|++| |++||+||.|..
T Consensus 173 ipv~md~~G---i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy-DfLIVeDdpYy~ 248 (472)
T KOG0634|consen 173 IPVKMDQDG---IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY-DFLIVEDDPYYF 248 (472)
T ss_pred EeccccCCC---CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-CEEEEecCccce
Confidence 999996544 999999998842 356665 477799999999999999999999999 999999999999
Q ss_pred cccCCC--------C-----------cccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 273 IIYAPA--------T-----------HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 273 ~~~~~~--------~-----------~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
+.|+.. + .+++.+++- .+|||.+.||||.++ ||+|+||+.+++.+++++.......+.+
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDt-dGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~ 326 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDT-DGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSG 326 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccccc-cccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecC
Confidence 888621 1 133444554 699999999999998 9999999999999999998888888888
Q ss_pred CChHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHHHHHHHhcc-CCC--CeecCCCceEEEeeeccCccCCcccCCCC
Q 012124 334 ASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGE-LEG--VKMSEPQGAFYLFIDFSTYYGSEAEGFGK 408 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~-~~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 408 (470)
++.+.|.++.+.|+.+.. ..+|+.+++..|..|++.+..+|.+ +|+ +++.+|.+|||+|+++|..- ......
T Consensus 327 pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~---~~~~~~ 403 (472)
T KOG0634|consen 327 PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYIN---FDTKKS 403 (472)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccc---cccccc
Confidence 999999999999886421 1388999999999999999999988 564 57889999999999998210 000000
Q ss_pred CCCHHHHHHHHHHcCCEEEECCCCCCCC------C-cEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012124 409 IENSESLCRYLLDKAQVALVPGDAFGDD------T-CIRISYAA-SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 409 ~~~~~~l~~~L~~~~gI~v~pg~~f~~~------~-~iRls~~~-~~~~i~~~l~~l~~~l~~~ 464 (470)
....+++...++.+.||.+.+|..|... . ++|++++. +.++++++++||..++++.
T Consensus 404 i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 404 INQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred hHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 1125566666667779999999999632 2 89999998 8899999999999999875
No 89
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-44 Score=353.03 Aligned_cols=324 Identities=23% Similarity=0.393 Sum_probs=264.1
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
..++|+.|+|++++|+.+++++.+.+.. ....|++ .+..+||+++++++ + +++++|++|+|+++++..++.+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~----~--~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYC----S--VVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHh----C--CCcccEEEecCHHHHHHHHHHH
Confidence 4589999999999999999999887764 4567854 45789999999996 3 5789999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
++++||+|++++|+|+.+...++..|++++.++++. ++.+|++.+++++++ +++++++++||||||.+++.++++++
T Consensus 96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l 173 (351)
T PRK14807 96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKE--DYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKI 173 (351)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999863 466999999999965 89999999999999999996666555
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+ +++ +.++|+||+|.++ ++ ....++ ++ ..+++|+++||||.+|+||+|+||+++++++++.+...+.. +
T Consensus 174 ~---~~~-~~~~ivDe~y~~~-~~-~~~~~~--~~-~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~--~ 242 (351)
T PRK14807 174 I---EKS-RGIVVVDEAYFEF-YG-NTIVDV--IN-EFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP--Y 242 (351)
T ss_pred H---HhC-CCEEEEeCcchhh-cc-cchHHH--hh-hCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC--C
Confidence 5 466 6778899999886 32 222222 22 24789999999999999999999999999999999876653 4
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.+.+.|.++..++++ .++++..+.++++++.+.+.|++++|+.+.+ .+|+|+|++++ +.
T Consensus 243 ~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~--------------~~ 302 (351)
T PRK14807 243 NINSLSQVIALKVLRT-----GVLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK--------------DA 302 (351)
T ss_pred CcCHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC--------------CH
Confidence 5789999999999974 3556666778888999999998888888754 55778999986 45
Q ss_pred HHHHHHHHHcCCEEEECCCC-CCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVPGDA-FGDDTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~-f~~~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
.++++.|+++ ||.+.++.. ++.++++||+++.. ++.+.+++.|+++
T Consensus 303 ~~~~~~l~~~-gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~ 349 (351)
T PRK14807 303 DYVYQGLLER-GILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKEL 349 (351)
T ss_pred HHHHHHHHHC-CEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHh
Confidence 6788877765 999988653 34568999999863 4556666666554
No 90
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=3e-44 Score=351.75 Aligned_cols=324 Identities=18% Similarity=0.300 Sum_probs=264.9
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 172 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~ 172 (470)
+++++||+.|.+++.+|+.+++++.+.+.. ...|+++.|..+||+++++++ | +++++|++|+|+++++.++++
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~~----~--~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD-LAAYPSTEDERRARAAVAARH----G--RTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhH-hhcCCCccchHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHh
Confidence 457899999999999999999999988764 567988889999999999996 3 578999999999999998888
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
+++| .++++.|+|..+...++..|++++.++++.+ +.+|++.+ +++++++++++||||||.++|.+ +|
T Consensus 94 --l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~---~l 161 (349)
T PRK07908 94 --LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE---QL 161 (349)
T ss_pred --cCCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH---HH
Confidence 4675 5677899999999999999999999999643 67888865 34788999999999999999966 45
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
.++|+ + +.++|+||+|.++.++ ...++...+ .+++++++||||.++++|+|+||+++++++++.+...... +
T Consensus 162 ~~l~~-~-~~~iIvDe~y~~~~~~--~~~~l~~~~--~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~--~ 233 (349)
T PRK07908 162 LALRR-P-GRILVVDEAFADAVPG--EPESLAGDD--LPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAH--W 233 (349)
T ss_pred HHHHh-c-CCEEEEECcchhhccC--Ccccccccc--CCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCC--C
Confidence 56665 4 5678889999987543 234554433 4689999999999999999999999999999998876554 4
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
..+.+.|.++..++... ..++++++++.++++++.+.+.|+++ |+++..|.+|+|+|++++ +.
T Consensus 234 ~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~--------------~~ 296 (349)
T PRK07908 234 PVGTLQLEAIAACCAPR--AVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP--------------DA 296 (349)
T ss_pred CccHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC--------------cH
Confidence 46777787777777632 25788999999999999999999988 888888889999999987 34
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
.++.+.| +++||.+.||..|+. +++|||+++ ++++++++++.|++++.
T Consensus 297 ~~~~~~l-~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 297 ELLRKRL-RERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHH-HhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 5666655 456999999998853 689999997 44577777777776653
No 91
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.8e-45 Score=352.89 Aligned_cols=313 Identities=18% Similarity=0.282 Sum_probs=251.6
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
.+|+|+.|++++... .....| |..-..+||+++++++. +++++|++|+|++++|.+++. +
T Consensus 17 ~~i~l~~Nenp~~~~------------~~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~it~Gs~~~l~~~~~-~ 76 (332)
T PRK06425 17 RIIDFSANINDFMDI------------GDISIY-PEISYTDIEDQIKIYTQ------GLKIKVLIGPGLTHFIYRLLS-Y 76 (332)
T ss_pred CEEEeccccCCCcCh------------hhcccC-cCcCHHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHH-H
Confidence 579999999877421 124568 55568999999999974 478999999999999999987 4
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 175 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 175 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
+++|+ |++++|+|+.|...++..|++++.+|++. +++|.+.+++ .+++++++++||||||.++|.+++++|++
T Consensus 77 ~~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~ 149 (332)
T PRK06425 77 INVGN-IIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISE 149 (332)
T ss_pred hCCCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHH
Confidence 67875 66669999999999999999999999864 3367666653 37899999999999999999999999999
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCC
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 334 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 334 (470)
+|+++ +++||+||+|.+|.+++ .++...+....+++|+++||||.+|+||+|+||+++++++++.+.+....+. .
T Consensus 150 ~a~~~-~~~iI~DE~Y~~~~~~~--~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~--~ 224 (332)
T PRK06425 150 ICRKK-GALLFIDEAFIDFVPNR--AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWS--V 224 (332)
T ss_pred HHHHc-CCEEEEecchhcccccc--chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCc--c
Confidence 99999 99999999999988753 2234444333579999999999999999999999999999999887554332 3
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 414 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
+.+. ..++..+.. +.++++.++.|+++++.+.+.|+++ |+.+..+.+|+|+|+++| ++.+
T Consensus 225 ~~~~----~~~l~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--------------~~~~ 284 (332)
T PRK06425 225 CDPA----IDFIRSIDL-DYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--------------DAHD 284 (332)
T ss_pred CHHH----HHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--------------CHHH
Confidence 3333 333433332 6678889999999999999999988 787765556778999886 4678
Q ss_pred HHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 415 LCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 415 l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
+++.|+++ ||.+.||..|+. ++++||+++.. ++++.+++.|++++
T Consensus 285 ~~~~l~~~-gi~v~~~~~f~~~~~~~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 285 FYSYLLKN-GILVRLLDDYECLGEQYIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHC-CeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 88888865 999999999853 47999999964 57788888887765
No 92
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-44 Score=345.38 Aligned_cols=330 Identities=28% Similarity=0.427 Sum_probs=283.7
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
++++|+.|++++++|+.+.+++.+.+. ....| |.....+|++++++++. . .++++|++++|+++.|.++++++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~-~~~rY-Pd~~~~~l~~a~a~~~~----~-~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD-KLNRY-PDPDYRELRAALAEYYG----V-VDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH-hhccC-CCCcHHHHHHHHHHHhC----C-CCcceEEEcCChHHHHHHHHHHh
Confidence 479999999999999999999988876 47789 55588999999999974 2 57899999999999999999999
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 175 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 175 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
+.|||.|++..|+|..|...++..|++++.++..+ |.+|+|.+.+++.+++++|++||||||||..++.++++++++
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~ 172 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLE 172 (356)
T ss_pred hcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999863 779999999999889999999999999999999999999999
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCC
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 334 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 334 (470)
.+.+ +.+||+||+|.+|.- .+...+....+++++++||||.||++|+|+||+++++++++.+.+.+..++ .
T Consensus 173 ~~~~--~~~vVvDEAY~eF~~-----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~--v 243 (356)
T COG0079 173 ALPE--GGLVVIDEAYIEFSP-----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFN--V 243 (356)
T ss_pred hCCC--CcEEEEeCchhhcCC-----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCC--C
Confidence 8875 478888999999653 222222223678999999999999999999999999999999999987665 8
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCccCCcccCCCCCCCHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
|.+++.++.+++++ .+++++.++...+.|+++.+.|++++ +. +.++. +.|+++++++. ...
T Consensus 244 ~~~a~~aa~aal~~----~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~-aNFvlv~~~~~------------~~~ 305 (356)
T COG0079 244 SSPALAAAIAALRD----ADYLEESVERIREERERLYAALKALG-LFGVFPSQ-ANFVLVRVPDA------------EAA 305 (356)
T ss_pred CHHHHHHHHHHccc----HHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCC-CcEEEEECCCc------------cHH
Confidence 99999999999986 68999999999999999999999984 55 55444 66689898752 345
Q ss_pred HHHHHHHHcCCEEEECCCC-CCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 414 SLCRYLLDKAQVALVPGDA-FGDDTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 414 ~l~~~L~~~~gI~v~pg~~-f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
.+.+.|+++ ||.++.... ...++++|++++..++. +.+++.|+++++.
T Consensus 306 ~l~~~L~~~-giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 306 ALAEALLKK-GILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHC-CEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 788888776 999999765 23467999999976554 8889988888754
No 93
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-44 Score=353.14 Aligned_cols=324 Identities=24% Similarity=0.380 Sum_probs=260.7
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 175 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~ 175 (470)
.++++.+++.+.+++.. ......|+++ +..+||++|++++ | +++++|++|+|++++|.+++.+++
T Consensus 33 ~~~~~~ne~~~~~~~~~--------~~~~~~Y~~~-~~~~lr~~ia~~~----~--~~~~~I~~t~G~~~~l~~~~~~~~ 97 (364)
T PRK04781 33 DVWLNANESAWANPADP--------DASTRRYPDP-QPPGLRSALAALY----G--CAPEQLLIGRGSDEAIDLLVRALC 97 (364)
T ss_pred CEEeeCCCCCCCCChhh--------cchhccCCCC-CHHHHHHHHHHHh----C--cChHHEEEeCCHHHHHHHHHHHhc
Confidence 47888888877765421 1125668554 5799999999997 3 578999999999999999999999
Q ss_pred CCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCcC-CCCCccCHHhHhhhc-cCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 176 SPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 176 ~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~l-~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
.+| |.|++++|+|..+...++..|++++.+|++. ++++.+|++.+++.+ +++++++++++||||||.+++.++++++
T Consensus 98 ~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l 177 (364)
T PRK04781 98 VPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERA 177 (364)
T ss_pred CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHH
Confidence 999 8999999999999888899999999999853 346678999886554 6789999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+++|+ + +++||+||+|.+|.+.. +...+....+++|+++||||.||+||+|+||+++++++++.+.+.+.. +
T Consensus 178 ~~~~~-~-~~~iI~Deay~~f~~~~----~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~--~ 249 (364)
T PRK04781 178 LQALQ-G-KALVVVDEAYGEFSDVP----SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAP--Y 249 (364)
T ss_pred HHhCC-C-CcEEEEeCcchhhcCCc----chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCC--C
Confidence 99985 5 78999999999987532 122222235789999999999999999999999999999999987754 4
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.+.+.|.++..+|.++. ..+..+..+.++++++.+.+.|++++|+....|.+|+|+|++++ +.
T Consensus 250 ~~~~~~~~~a~~~l~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--------------~~ 313 (364)
T PRK04781 250 PVPTPCAALAEQALSAPA--LAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--------------DA 313 (364)
T ss_pred CCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------CH
Confidence 578999999999998753 24455555678999999999999887775445777899999986 45
Q ss_pred HHHHHHHHHcCCEEEECCCCCC-CCCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~-~~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
.++.+.|.+ +||.|.||..|. .++++||+++. .++.+..++.|+++
T Consensus 314 ~~~~~~l~~-~gI~v~~~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~ 360 (364)
T PRK04781 314 EAAFQALLA-AGVVVRDQRAAPRLSDALRITLGT-PEQNDRVLAALQRT 360 (364)
T ss_pred HHHHHHHHH-CCeEEeeCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHH
Confidence 677777764 599999998763 46799999996 34556666666543
No 94
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=6.4e-44 Score=349.45 Aligned_cols=326 Identities=26% Similarity=0.444 Sum_probs=276.5
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.++|+|+.|++++.+|+.+.+++.++.. ....|+++.+ +++|+++++++. +++++|++|+|+++++..++.+
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEAD-KLHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEIIELLIRA 90 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHH-HhhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHHHHHHHHH
Confidence 4689999999999999999999998864 3567866665 899999999974 5778999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
++++||+|++++|+|+.+...++..|++++.++++.+ +.+|++.+++.+++++++|++++|+||||.+++.+++++++
T Consensus 91 l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~ 168 (346)
T TIGR01141 91 FLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVL 168 (346)
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999988889999999999998643 55899999999888999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
+.|+ + ++++|+||+|.++.+.+. ..+.. .. .+++++++||||.+|++|+|+||+++++++++.+...... ++
T Consensus 169 ~~~~-~-~~~ii~D~~y~~~~~~~~-~~~~~--~~-~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~ 240 (346)
T TIGR01141 169 ERTP-E-DALVVVDEAYGEFSGEPS-TLPLL--AE-YPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--FN 240 (346)
T ss_pred HhCC-C-CcEEEEECchhhhcCCcc-HHHHH--hh-CCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--CC
Confidence 9987 7 899999999998664321 11111 11 3578999999999988999999999999999988876543 45
Q ss_pred CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHH
Q 012124 334 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
.+.+.|.++..+++. ..+.++.++.++++++.+.+.|++++|+++. +.+|+|+|++++. ++.
T Consensus 241 ~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-------------~~~ 302 (346)
T TIGR01141 241 LSRLAQAAAIAALRD----DDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-------------DAD 302 (346)
T ss_pred CCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-------------CHH
Confidence 789999999998875 4478889999999999999999988888865 4567889999873 467
Q ss_pred HHHHHHHHcCCEEEECCCCCCC-CCcEEEEeecCHHHHHHHHHHH
Q 012124 414 SLCRYLLDKAQVALVPGDAFGD-DTCIRISYAASLTTLQAAVERI 457 (470)
Q Consensus 414 ~l~~~L~~~~gI~v~pg~~f~~-~~~iRls~~~~~~~i~~~l~~l 457 (470)
++++.|.++ ||.+.||..|+. ++++|+|++ ++++++++++.|
T Consensus 303 ~~~~~L~~~-gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 303 ALFEALLEK-GIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred HHHHHHHHC-CeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 888888765 999999998843 789999988 677888888765
No 95
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-44 Score=352.02 Aligned_cols=320 Identities=23% Similarity=0.371 Sum_probs=262.6
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
..++|+.|++++++++.+. ......| |.....+|++++++++ | +++++|++|+|+++++.++++++
T Consensus 29 ~~~~l~~Nenp~~~~~~~~-------~~~~~~Y-p~~~~~~l~~~~a~~~----g--~~~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLT-------QQTLNRY-PECQPKAVIENYAAYA----G--VKPEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CceEecCCCCCCCCChhhc-------ccccccC-CCCChHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHHHHHh
Confidence 3599999999988876431 1235668 4445578888888875 4 58899999999999999999999
Q ss_pred cCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 175 CSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 175 ~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
+++| |.|++++|+|+.|...++..|++++.+|++. ++.+|++.+++++ +++++|++++||||||..++.+++++|+
T Consensus 95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~ 171 (351)
T PRK01688 95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLL 171 (351)
T ss_pred cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9997 9999999999999999999999999999863 4779999999988 5899999999999999999999999999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
+.|++ +.+||+||+|.+|... .++..+....+++|+++||||.||++|+|+||+++++++++.+.+.... ++
T Consensus 172 ~~~~~--~~~vivDEay~~f~~~----~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~--~~ 243 (351)
T PRK01688 172 ELTRG--KAIVVADEAYIEFCPQ----ASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAP--YP 243 (351)
T ss_pred HhCCC--CcEEEEECchhhcCCC----CChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCC--CC
Confidence 99875 4689999999997532 1222332235799999999999999999999999999999999887654 45
Q ss_pred CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHH
Q 012124 334 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
.+.+.|.++.++|.+. ..+++++.++.++++++++.+.|++++++....|.+++|+|++++ +..
T Consensus 244 v~~~~~~~a~~~L~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--------------~~~ 307 (351)
T PRK01688 244 LSTPVADIAAQALSPQ--GIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--------------ASS 307 (351)
T ss_pred CCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------CHH
Confidence 7788888888888752 146788888889999999999999887775445667778999885 467
Q ss_pred HHHHHHHHcCCEEEECCCCC-CCCCcEEEEeecCHHHHHHHHHHH
Q 012124 414 SLCRYLLDKAQVALVPGDAF-GDDTCIRISYAASLTTLQAAVERI 457 (470)
Q Consensus 414 ~l~~~L~~~~gI~v~pg~~f-~~~~~iRls~~~~~~~i~~~l~~l 457 (470)
++.+.|+++ ||.++++..| +.++++|++++ +.++++.+++.|
T Consensus 308 ~l~~~L~~~-gi~vr~~~~~~~~~~~iRis~~-~~~e~~~l~~al 350 (351)
T PRK01688 308 AVFKSLWDQ-GIILRDQNKQPGLSNCLRITIG-TREECQRVIDAL 350 (351)
T ss_pred HHHHHHHHC-CeEEEECCCcCCCCCeEEEeCC-CHHHHHHHHHhh
Confidence 888888765 9999987654 56789999999 457788877765
No 96
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-44 Score=327.93 Aligned_cols=333 Identities=23% Similarity=0.378 Sum_probs=288.6
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHHcCC--CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCC
Q 012124 124 FTRYTPNAGTLELRSAICHKLKEENGL--SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADA 200 (470)
Q Consensus 124 ~~~y~~~~g~~~lr~~ia~~l~~~~g~--~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~ 200 (470)
...|.+..|.+++|+++|+++.+.+|- ..+|+++++++|++.+.+.+...|.+|||..+|+.|.|+++..-++ ..|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 355888899999999999999987764 5789999999999999999999999999999999999999976555 4799
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccc
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 274 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~ 274 (470)
++++|.....++|.++++.||+++++ ++|.++++||+||.|.+++++++..++++|.++ ++.+|+||+|+.-+
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k-niHvI~DEIya~sV 272 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK-NIHVISDEIYAGSV 272 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc-ceEEEeehhhcccc
Confidence 99999999999999999999998843 788999999999999999999999999999999 99999999999999
Q ss_pred cCCCCcccccccCC----CCCceEEEeccCcccccccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcC
Q 012124 275 YAPATHTSFASLPG----MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLG 349 (470)
Q Consensus 275 ~~~~~~~~~~~~~~----~~~~~i~i~S~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~ 349 (470)
|+.....++.++.. ..+++-++.|+||-+|+||+|+|.++. ++++..+..++..... .|+..|+.++.+|.+.
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~--vSs~tQ~~la~LLSD~ 350 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGL--VSSQTQYLLASLLSDE 350 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccC--CcHHHHHHHHHHhchH
Confidence 98876666655421 358999999999999999999999996 5667777777765443 7899999999999985
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012124 350 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 429 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p 429 (470)
.+.+.++++..++++.+..++.+.|+++ |+.+....+|+|+|+++.+.... .+.+...+++++++.+.++.+.|
T Consensus 351 ~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s-----~tfe~El~Lw~~i~~~vklnlSp 424 (471)
T KOG0256|consen 351 EFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTS-----LTFEGELELWERILDNVKLNLSP 424 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcCc-----CChHHHHHHHHHHHHhhccccCC
Confidence 5556778999999999999999999999 99999999999999999765321 11224567889999888999999
Q ss_pred CCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012124 430 GDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 430 g~~f~~--~~~iRls~~~-~~~~i~~~l~~l~~~l~~~~ 465 (470)
|+.|.+ +||+|++|+. .++.++-+++||+.++....
T Consensus 425 G~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 425 GSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred CCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence 999864 7999999999 66777779999999987544
No 97
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-43 Score=348.14 Aligned_cols=328 Identities=25% Similarity=0.423 Sum_probs=270.5
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
++|+|+.|.|++.+++.+.+++.+.+. ....| +..|..++|+++++++. +++++|++|+|+++++..++..+
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAA-GVNRY-PDMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHH-hcCcC-CCCcHHHHHHHHHHHhC------cCHHHEEECCCHHHHHHHHHHHh
Confidence 469999999999888899999988775 35668 56899999999999973 57889999999999999999999
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 175 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 175 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
++|||+|+++.|+|..+...++..|++++.++++++ +++|++.+++.++++++++++++||||||.++|.+++.++++
T Consensus 95 ~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~ 172 (352)
T PRK03321 95 AGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLD 172 (352)
T ss_pred cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHH
Confidence 999999999999999988889999999999998643 458999999999889999999999999999999888888888
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCC
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 334 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 334 (470)
.+ ++ +++||+||+|.++.+++....++..++. .+++++++||||.||+||+|+||+++++++++.+.+.. ..++.
T Consensus 173 ~~-~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~--~~~~~ 247 (352)
T PRK03321 173 AV-PA-DVLVVLDEAYVEYVRDDDVPDGLELVRD-HPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA--VPFSV 247 (352)
T ss_pred hC-CC-CeEEEEechHHHhccCcCCCcHHHHHhh-CCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc--CCCCC
Confidence 65 47 8999999999999886543333333443 57899999999999999999999999999999998764 45678
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 414 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
+.+.|.++..+|.. .+.+.+.+++ +.++++.+.+.|++. |+.+.+ .+|+|+|++++. +..+
T Consensus 248 s~~~q~~a~~~l~~---~~~~~~~~~~-~~~~r~~~~~~L~~~-~~~~~~-~~g~~i~i~l~~-------------~~~~ 308 (352)
T PRK03321 248 NSLAQAAAIASLAA---EDELLERVDA-VVAERDRVRAALRAA-GWTVPP-SQANFVWLPLGE-------------RTAD 308 (352)
T ss_pred CHHHHHHHHHHhcC---HHHHHHHHHH-HHHHHHHHHHHHHHC-CCccCC-CCCCEEEEeCCC-------------CHHH
Confidence 99999998888874 2455554444 445667788999887 776544 467889999853 5678
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 415 LCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 415 l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+++.|.+ +||.+.+ |+ ++++||+++ +.++++.++++|++++.
T Consensus 309 ~~~~l~~-~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 309 FAAAAAE-AGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHH-CCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 8888754 5999987 43 457999986 55678888888887654
No 98
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-43 Score=342.33 Aligned_cols=316 Identities=22% Similarity=0.343 Sum_probs=254.2
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCC-CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
.++++|+|+.|+|++++|+.+++++.+.+..+. ..| ++.|.++||+++++|+++. + +++++|++|+|++++|.++
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~-~--~~~~~i~it~Ga~~~i~~~ 92 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTD-F--LSKNNVSVGNGADEIIYVM 92 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCC-C--CCcceEEEcCCHHHHHHHH
Confidence 345789999999999999999999988775443 447 4458999999999999753 3 6889999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+.++ |.|++++|+|+.|...++..|++++.+|++.+ +.++.+. + .+++++++++||||||.++|.++++
T Consensus 93 ~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~ 161 (335)
T PRK14808 93 MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIE 161 (335)
T ss_pred HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 9887 68999999999999999999999999998643 3343322 2 2568899999999999999988888
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+|+ ++ +++||+||+|.+|. +....++ +. ..+++|+++||||.++++|+|+||+++++++++.+.+.+.
T Consensus 162 ~l~----~~-~~~ii~DE~Y~~f~--~~~~~~~--~~-~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~-- 229 (335)
T PRK14808 162 RIL----KT-GAFVALDEAYYEFH--GESYVDL--LK-KYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRL-- 229 (335)
T ss_pred HHH----hc-CCEEEEECchhhhc--CCchHHH--HH-hCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcC--
Confidence 776 47 89999999999964 2211121 12 2468999999999999999999999999999999987663
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.++.+.+.|.++..++++ .++..+.++.++++++.+.+.|+++ |+.+.+++++ |+|++++..
T Consensus 230 ~~~~~~~~q~a~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~l~~~------------ 291 (335)
T PRK14808 230 PFNVSYVSQMFAKVALDH----REIFEERTKFIVEERERMKSALREM-GYRITDSRGN-FVFIFMEKE------------ 291 (335)
T ss_pred CCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCe-EEEEeCCCc------------
Confidence 356789999999888874 4566777778888899999999988 7888777555 579998753
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
+..++.+.|.++ ||.|.. | .+++|++++.. ++.+.+++.|++
T Consensus 292 ~~~~~~~~l~~~-Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~ 333 (335)
T PRK14808 292 EKERLLEHLRAK-NIAVRS---F--REGVRITIGKR-EENDMILKELEV 333 (335)
T ss_pred cHHHHHHHHHHC-CeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHh
Confidence 567788877654 999985 3 47899998864 567777777654
No 99
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.1e-43 Score=346.64 Aligned_cols=327 Identities=28% Similarity=0.447 Sum_probs=270.0
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEE-ecChHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~i-t~g~~~al~~~ 170 (470)
.++++|+|+.|++++.+++.+.+++.+.+.. ...|+++. ..+||+++++++ | +++++|++ |+|+++++..+
T Consensus 32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~-~~~lr~~ia~~~----~--~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 32 DPESIIKLGSNENPLGPSPKAVEAIEKELSK-IHRYPEPD-APELREALSKYT----G--VPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCC-HHHHHHHHHHHh----C--CCHHHEEEeCCCHHHHHHHH
Confidence 4457899999999988888888888877654 56685544 489999999987 3 57889999 79999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
++.++++||.|++++|+|+.+...++..|++++.++.+ +++.+|++.+++.++++++++++++||||||.+++.++
T Consensus 104 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~-- 179 (361)
T PRK00950 104 MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEED-- 179 (361)
T ss_pred HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHH--
Confidence 99999999999999999999998999999999999854 45679999999999888999999999999999999665
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 330 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~ 330 (470)
+.++|+++ +++||+||+|.++. +....+ +....+++++++||||.+|++|+|+||+++++++++.+.+....+
T Consensus 180 -l~~l~~~~-~~~li~De~y~~~~--~~~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~ 252 (361)
T PRK00950 180 -IRKILEST-DALVFVDEAYVEFA--EYDYTP---LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF 252 (361)
T ss_pred -HHHHHHHC-CcEEEEECchhhhC--ccchHH---HHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC
Confidence 45556688 99999999999865 221222 222247899999999999999999999999999999888776543
Q ss_pred cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC
Q 012124 331 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 410 (470)
Q Consensus 331 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
+.+.+.|.++..++.+ .+++++.++.++++++.+.+.|+ +.+. +.+++|+|++++..
T Consensus 253 --~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~------------ 309 (361)
T PRK00950 253 --SLTRLSQAAAIAALSD----KEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPM------------ 309 (361)
T ss_pred --CCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCC------------
Confidence 4778899999988874 67788888999999999888875 4443 56678899998532
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 411 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 411 ~~~~l~~~L~~~~gI~v~pg~~f~~--~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
+..++++.|.++ ||.+.||..|+. ++++|++++ +.++++++++.|+++++
T Consensus 310 ~~~~~~~~l~~~-gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 310 TAKEFCEELLKR-GVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIVE 361 (361)
T ss_pred CHHHHHHHHHHC-CEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHhC
Confidence 788999998765 999999988853 469999998 55689999999988753
No 100
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-43 Score=345.76 Aligned_cols=320 Identities=22% Similarity=0.353 Sum_probs=259.5
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.+.++|+.|++++++++.+ .. .....|++ .+..+||+++++++ | +++++|++|+|++++|.+++++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~------~~-~~~~~Yp~-~~~~~Lr~aia~~~----~--~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL------DL-ARLNRYPE-CQPPELINAYSAYA----G--VAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCcEEeeCCCCCCCCChhh------hh-HHhccCCC-CCHHHHHHHHHHHh----C--cCHHHEEEeCCHHHHHHHHHHH
Confidence 3569999999998887543 11 13567854 46899999999986 4 6889999999999999999999
Q ss_pred hcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 174 VCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 174 l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
++++| |+|++++|+|+.|...++..|++++.+|++. ++.+|++.+++ + +++++|++++||||||.+++.+++++|
T Consensus 97 ~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l 172 (354)
T PRK04635 97 FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQL 172 (354)
T ss_pred hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999 9999999999999999999999999999863 46689998874 4 589999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+++|+ +++||+||+|.+|... .++.++....+++++++||||.+|++|+|+||+++++++++.+..... .+
T Consensus 173 ~~~~~---~~~vivDeay~~~~~~----~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~--~~ 243 (354)
T PRK04635 173 IEMTP---DAIVVVDEAYIEFCPE----YSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIA--PY 243 (354)
T ss_pred HHhCC---CcEEEEeCchHhhccC----cchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcC--CC
Confidence 88764 5899999999987532 122233223578999999999999999999999999999998876544 35
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.+.+.|.++.++|.+. ..+++++.++.++++++.+.+.|++++++.+.++. |.|+|++++ +.
T Consensus 244 ~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~--------------~~ 306 (354)
T PRK04635 244 PVPLPVSEIATQALSEA--GLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFD--------------DV 306 (354)
T ss_pred CCCHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECC--------------CH
Confidence 57888898888888753 23567778888999999999999998668877665 567898886 35
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
.++.+.|. ++||.+.++..++.++++|+|++ +.++++.+++.|++
T Consensus 307 ~~~~~~l~-~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~ 351 (354)
T PRK04635 307 DAVFKALW-DAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHH-HCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence 57777665 55999987655555789999987 56788888888764
No 101
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=9.2e-43 Score=337.87 Aligned_cols=305 Identities=17% Similarity=0.203 Sum_probs=243.7
Q ss_pred CeEEccCCCCCCCCh-HHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 95 SVIRLAAGEPDFDTP-VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~-~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
++|+|+.|.++++++ +.+.+ ..+ ..|+. +..+||++|++++ .+++|++|+|++++|.+++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~---~~~----~~yp~--~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~~~~-- 81 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA---DAW----ARLPE--TDDGLEAAARAYY--------GAPQLLPVAGSQAAIQALP-- 81 (330)
T ss_pred HheeecCCcCCCCCCCcccCH---HHH----HhCCC--ChHHHHHHHHHHh--------CCCCEEECcCHHHHHHHHH--
Confidence 469999997665543 33222 222 23743 3489999999996 2479999999999999875
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 174 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 174 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
++.+||+|++++|+|+.+...++..|++++.+|++ .+++.++ +++++++++||||||.++|.+++++|+
T Consensus 82 ~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~ 150 (330)
T PRK05664 82 RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWH 150 (330)
T ss_pred HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHH
Confidence 35799999999999999999999999999999863 2344443 678889999999999999999999999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
++|+++ +++||+||+|.++. ..+++..++. .+++|+++||||.+|+||+|+||+++++++++.+.+.... ++
T Consensus 151 ~~~~~~-~~~iI~DE~y~~~~----~~~s~~~~~~-~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~--~~ 222 (330)
T PRK05664 151 ARLAAR-GGWLVVDEAFMDNT----PQHSLAACAH-RPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGP--WT 222 (330)
T ss_pred HHHHhc-CCEEEEECCcccCC----Cccccccccc-CCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCC--CC
Confidence 999999 99999999998753 1245556654 5789999999999999999999999999999999887553 35
Q ss_pred CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCce--EEEeeeccCccCCcccCCCCCCC
Q 012124 334 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA--FYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 334 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
.+.+.|.++..+|++ ..+.++.++.++++++.+.+.|+++ |+. +.+| +|+|++++ +
T Consensus 223 ~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~~--------------~ 280 (330)
T PRK05664 223 VSGPTRWLAQAALAD----TPWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRTE--------------D 280 (330)
T ss_pred CCHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEecC--------------C
Confidence 788999999999985 4567788999999999999999987 654 3344 77888764 5
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
..++.+.|.++ ||.|.+ |+.++++||+++.+.++++++++.|+++.++
T Consensus 281 ~~~~~~~l~~~-gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 AAALHEFLARR-GILTRL---FEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHC-CeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 67888877654 999974 5567899999997666777777777666543
No 102
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=9.7e-43 Score=338.35 Aligned_cols=312 Identities=18% Similarity=0.195 Sum_probs=251.3
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
++++|+.|++++++|+..... .. ...|++ .. .+||+++++++ |+. ++++|++|+|++++|.++.. +
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~--~~----~~~Yp~-~~-~~L~~~ia~~~----~~~-~~~~I~i~~Gs~e~i~~l~~-~ 90 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPA--DA----WRRLPE-DD-DGLAACAARYY----GAP-DAAHVLPVAGSQAAIRALPA-L 90 (339)
T ss_pred hhceeccCCCCCCCCCCCCCH--HH----HHhCCC-ch-HHHHHHHHHHh----CCC-CcccEEECcCHHHHHHHHHH-h
Confidence 469999999887765221111 11 234844 34 89999999986 542 46899999999999997755 5
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 175 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 175 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
+++|| |++++|+|+.|...++..|++++.++.+. +.+. +.++++++++||||||.++|.+++++|++
T Consensus 91 ~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~----~~~~~v~l~nPnNPTG~~~s~~~l~~l~~ 157 (339)
T PRK06959 91 LPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLP----AALTHLIVVNPNNPTAERLPAARLLRWHA 157 (339)
T ss_pred cCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhcc----ccCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 67887 88999999999999999999999988642 2222 24578999999999999999999999999
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCC
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 334 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 334 (470)
.|+++ +.+||+||+|.++.+. +++..+.. .+++|+++||||.||++|+|+||+++++++++.+.+.... ++.
T Consensus 158 ~~~~~-~~~vI~DEay~~~~~~----~s~~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~--~~v 229 (339)
T PRK06959 158 QLAAR-GGTLIVDEAFADTLPA----ASLAAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGA--WTV 229 (339)
T ss_pred HHHHc-CCEEEEECCCccCCCc----ccchhccC-CCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCC--CCC
Confidence 99998 8999999999997542 34444433 4779999999999999999999999999999999988754 447
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 414 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
+.+.|.++.++|++ .++.++.++.++++++.+.+.|+++ |+.+. .+++|+|++++ +..+
T Consensus 230 s~~~q~a~~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--------------~~~~ 288 (339)
T PRK06959 230 SGPARHAVRAAFAD----AAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--------------RAAA 288 (339)
T ss_pred cHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--------------CHHH
Confidence 88999999999985 6778889999999999999999988 77664 35788999875 4567
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012124 415 LCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 415 l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~~~ 466 (470)
+.+.|.++ ||.|.. |+..+++||+++.+.++++.+++.|+++++.+..
T Consensus 289 l~~~l~~~-GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 289 LHAALARR-GIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred HHHHHHhC-CeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence 88888766 999974 4556799999977777888888888888776543
No 103
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-42 Score=334.39 Aligned_cols=317 Identities=21% Similarity=0.356 Sum_probs=252.9
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 172 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~ 172 (470)
.+.|+|+.|.+++++|+.+.+++.+++.. ....| +..|.++||+++++++. +++++|++|+|+++++..++.
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHhC------cCcceEEEcCCHHHHHHHHHH
Confidence 36799999999988888999999888754 46778 56799999999999973 688999999999999998887
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 173 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 173 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
.+ +||+|++++|+|+.+...++..|++++.++++. ++++|++.+++.+ ++++++++++||||||.+++.+++.++
T Consensus 91 ~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i 165 (337)
T PRK03967 91 LF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKV 165 (337)
T ss_pred Hh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 76 799999999999999888999999999999863 4679999998865 578889999999999999996665554
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccC
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 332 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 332 (470)
+ ++ +++||+||+|.+|.. ....++ .. ..+++|+++||||.||+||+|+||+++++++++.+.+.... +
T Consensus 166 ---~-~~-~~~ii~De~y~~~~~--~~~~~~--~~-~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~--~ 233 (337)
T PRK03967 166 ---L-ET-GKPVVLDEAYAEFSG--KSLIGL--ID-EYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPP--F 233 (337)
T ss_pred ---H-hc-CCEEEEECchhhhcc--cchHHH--Hh-hCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCC--C
Confidence 4 47 899999999998752 111221 12 24689999999999999999999999999999999887654 4
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
+.+.+.|.++..+|++ .++..+.++.+.++++.+.+.|.+. ..|.+++|+|++++
T Consensus 234 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~---------------- 288 (337)
T PRK03967 234 SLNILTMKIVRLALDH----YDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKLD---------------- 288 (337)
T ss_pred CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH----------------
Confidence 6789999999999975 4455555566667778888888764 23678899998752
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 413 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
+.+.|+++ ||.+.++.. ..++++||+++. .++.+++++.|+++.+.+
T Consensus 289 --~~~~l~~~-gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 289 --AYDYLLEN-GIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEGY 335 (337)
T ss_pred --HHHHHHHC-CEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHhc
Confidence 45666655 999988653 346799999986 344556666666665544
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.4e-42 Score=335.16 Aligned_cols=319 Identities=22% Similarity=0.329 Sum_probs=259.8
Q ss_pred HHHHHhcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 86 ATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 86 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
.++...++++.++|+.|.|+..+| ..+. .......|+++.+ ++||+++++++ | +++++|++|+|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~y~~~~~-~~lr~~la~~~----~--~~~~~i~~t~G~~~ 75 (330)
T TIGR01140 9 AARYGIPPEDWLDFSTGINPLGPP--VPPI----PASAWARYPDPEY-DELRAAAAAYY----G--LPAASVLPVNGAQE 75 (330)
T ss_pred HHHcCCChhheeEccccCCCCCCC--hhhc----chHHHhhCCCccH-HHHHHHHHHHh----C--CChhhEEECCCHHH
Confidence 344444556789999999887765 1111 1123567866665 99999999986 3 46899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCC
Q 012124 166 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 166 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s 245 (470)
++..+... +.+| .|++++|+|..+...++..|.+++.++ |++.+++.+ ++++++++++||||||.+++
T Consensus 76 ~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~ 143 (330)
T TIGR01140 76 AIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAAL-EELDVLVLCNPNNPTGRLIP 143 (330)
T ss_pred HHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCC
Confidence 99997666 5678 699999999999999999999998887 778888888 46788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHH
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 325 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~ 325 (470)
.+++++|+++|+++ |++||+||+|.++.+. .++..+....+++|+++||||.+|++|+|+||+++++++++.+..
T Consensus 144 ~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~----~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 218 (330)
T TIGR01140 144 PETLLALAARLRAR-GGWLVVDEAFIDFTPD----ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLRE 218 (330)
T ss_pred HHHHHHHHHHhHhc-CCEEEEECcccccCCc----cchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHh
Confidence 99999999999999 9999999999987653 133333222578999999999999999999999999999999887
Q ss_pred HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccC
Q 012124 326 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 405 (470)
Q Consensus 326 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 405 (470)
... .++.+.++|.++..++++ ..+.++.++.++.+++.+.+.|++++.+.+. +.+|+|+|++++
T Consensus 219 ~~~--~~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~--------- 282 (330)
T TIGR01140 219 ALG--PWTVNGPARAAGRAALAD----TAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP--------- 282 (330)
T ss_pred cCC--CCCchHHHHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC---------
Confidence 664 345788999999999985 5677888999999999999999998556664 457899999876
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHHHHH
Q 012124 406 FGKIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERI 457 (470)
Q Consensus 406 ~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--~~~~iRls~~~~~~~i~~~l~~l 457 (470)
+..+++++|+++ ||.+.||..|. ..+++|++++...++ +.++.+|
T Consensus 283 -----~~~~l~~~l~~~-gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 -----DAAALHEALARR-GILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred -----CHHHHHHHHHHC-CEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 456888988875 99999999995 347999999985544 6666654
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-41 Score=326.16 Aligned_cols=298 Identities=21% Similarity=0.336 Sum_probs=232.5
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
++|+|+.|.++++ |+.+.+++.+++.. ...|+. ...||+++++++ | ++|++|+|+++++.+++..+
T Consensus 9 ~~i~l~~~~np~~-p~~~~~a~~~~~~~-~~~yp~---~~~l~~~ia~~~----~-----~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 9 GLIDFSASVNPYP-PEWLDEMFERAKEI-SGRYTY---YEWLEEEFSKLF----G-----EPIVITAGITEALYLIGILA 74 (311)
T ss_pred ceeEecCCCCCCC-CHHHHHHHHHHHHH-hhcCCC---hHHHHHHHHHHH----C-----CCEEECCCHHHHHHHHHHhh
Confidence 5799999987765 57888888877553 456743 467999999885 2 48999999999999887544
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 175 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 175 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
.+||+|++++|+|+.+...++..|++++.++ +|++.+++.++ +++++++++||||||.+++.+++++|++
T Consensus 75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~ 144 (311)
T PRK08354 75 -LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLD 144 (311)
T ss_pred -CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHH
Confidence 5999999999999999999999999997654 58889988876 5678899999999999999999999999
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCC
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 334 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 334 (470)
+|+++ |++||+||+|.+|.+++. . .. .+++|+++||||.|++||+|+||+++ +.+.+.+....+ ..
T Consensus 145 ~a~~~-~~~li~De~y~~f~~~~~---~---~~--~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~--~~ 210 (311)
T PRK08354 145 AVEDR-NALLILDEAFIDFVKKPE---S---PE--GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPW--SI 210 (311)
T ss_pred Hhhhc-CcEEEEeCcchhcccccc---c---cC--CCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCc--cC
Confidence 99999 999999999999887642 1 11 57899999999999999999999998 556666655433 35
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 414 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
+.+.|.++..+++. ..+++++.++.++++++.+.+.+. .++.++|++ ++++ +..+
T Consensus 211 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~-------~~~~~~~~~-~~~~--------------~~~~ 265 (311)
T PRK08354 211 GSTGYAFLEFLIED---DFEHLRKTMPLIWREKERFEKALY-------VKSDANFFI-KDVG--------------DAEK 265 (311)
T ss_pred CHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcC-------CCCCCcEEE-EECC--------------CHHH
Confidence 56667777777663 135566666666666666555441 246677755 5653 4677
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeecC--HHHHHHHHHH
Q 012124 415 LCRYLLDKAQVALVPGDAFGDDTCIRISYAAS--LTTLQAAVER 456 (470)
Q Consensus 415 l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~--~~~i~~~l~~ 456 (470)
+++.|.++ ||.+.||..|+.++++||+++.. .+.+.++++.
T Consensus 266 ~~~~l~~~-gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~ 308 (311)
T PRK08354 266 FVEFLKRN-GILVRDCTSFGLPGYIRFSVRDREENEKLIRALRE 308 (311)
T ss_pred HHHHHHHC-CeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 88887654 99999999998789999999973 2444444443
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=3.1e-37 Score=302.67 Aligned_cols=345 Identities=37% Similarity=0.640 Sum_probs=286.7
Q ss_pred EEccCCCCCCCChHHHHHHHHH-HHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 012124 97 IRLAAGEPDFDTPVLIAEAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 175 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~-~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~ 175 (470)
++|+.|.+++.+++.+.....+ ........|.+..|..++++.+++++...++....++++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 4789999988887776666654 222345778899999999999999999888876778899999999999999999999
Q ss_pred CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012124 176 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 255 (470)
Q Consensus 176 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~ 255 (470)
++||+|++++|+|+++...++..|.+++.++.+.++....+.+.++....++++++++++++||||..+|.+++++|+++
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~ 160 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999765543322366777777889999998899999999999999999999
Q ss_pred HHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH-HHHHHHHHHhhhccCCC
Q 012124 256 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGA 334 (470)
Q Consensus 256 ~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~ 334 (470)
|+++ |+++|+|++|+.+.+.+.....+.... ..+.+++++|++|.++.+|.|+||+++++ ++.+.+.........++
T Consensus 161 ~~~~-~~~~ivD~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
T cd00609 161 AKKH-GILIISDEAYAELVYDGEPPPALALLD-AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGP 238 (350)
T ss_pred HHhC-CeEEEEecchhhceeCCcccccccCcC-ccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCC
Confidence 9999 999999999998777544322122222 25678999999999988999999999999 89999988877767789
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 414 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
+...|.++..+++.. .++.+++++.++++++.+.+.|++.+...+..+.+|+++|+.++.. ...+
T Consensus 239 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~ 303 (350)
T cd00609 239 STLSQAAAAAALDDG---EEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG------------DDEE 303 (350)
T ss_pred ChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC------------ChHH
Confidence 999999999999862 3788889999999999999999987444435677899999998753 2444
Q ss_pred HHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHHHHHH
Q 012124 415 LCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERIK 458 (470)
Q Consensus 415 l~~~L~~~~gI~v~pg~~f~--~~~~iRls~~~~~~~i~~~l~~l~ 458 (470)
.+.++++++||.+.++..|. .+.++|++++...++++.++++|+
T Consensus 304 ~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 304 FLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred HHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 55556667799999988876 678999999988889999998875
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=6.6e-38 Score=313.37 Aligned_cols=368 Identities=16% Similarity=0.195 Sum_probs=285.1
Q ss_pred cccccCCchHHHHHHHHHHHHhcCCCeEEccCCCC--CCCChH---HHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHH
Q 012124 70 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP--DFDTPV---LIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 144 (470)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~--~~~~~~---~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l 144 (470)
+++.+++.......++...+.+.|.++|+|+.|+| |+.+|. .+.+++.+++..+...|++..|.++||+++++++
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~ 91 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF 91 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh
Confidence 35566777777788888888899999999999999 677755 6888888888877889999999999999999997
Q ss_pred HHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCC------CCCc--cC
Q 012124 145 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS------ENFL--LD 216 (470)
Q Consensus 145 ~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~------~~~~--~d 216 (470)
. .+++++|+|+++++.+++.++++||| |++++|.|..+...++..|++++.++++.. ++|. +|
T Consensus 92 ~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id 162 (460)
T PRK13238 92 G--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFD 162 (460)
T ss_pred C--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcC
Confidence 3 35799999999999999999999999 999999999999999999999999998642 3444 99
Q ss_pred HHhHhhhccC----CceEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEEecccc--ccccCC-----CCccccc
Q 012124 217 PKVLESKLTE----KSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYE--HIIYAP-----ATHTSFA 284 (470)
Q Consensus 217 ~~~l~~~l~~----~~~~i~l~~p~nPtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~--~~~~~~-----~~~~~~~ 284 (470)
++.|++.+++ ++++|++++|+|||| .++|.+++++|.++|++| |++||+|+++. ...|.. ....++.
T Consensus 163 ~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~-gi~li~Daa~~~e~a~f~~~~e~g~~~~si~ 241 (460)
T PRK13238 163 LEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY-GIPVVIDAARFAENAYFIKQREPGYKDKSIK 241 (460)
T ss_pred HHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECcchhhhhhhhhhccccccCCCHH
Confidence 9999999973 799999999999998 999999999999999999 99999999663 233321 1122222
Q ss_pred ccCCCCCceEEEeccCccccccccee------eEEEcC-HHHHHHHHHHh----hhccCCC-ChHHHHHHHHHHhcCCCC
Q 012124 285 SLPGMWERTLTVNGFSKAFAMTGWRL------GYIAGP-KHFVAACNKIQ----SQFTSGA-SSISQKAGVAALGLGYAG 352 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~~G~r~------G~~~~~-~~~~~~l~~~~----~~~~~~~-~~~~q~a~~~~l~~~~~~ 352 (470)
.+ ++.++|++|.+.++|+|+ ||++++ +++++.++... ...+++. +...|.|++..|.....
T Consensus 242 ~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~- 314 (460)
T PRK13238 242 EI------AREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD- 314 (460)
T ss_pred HH------hhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC-
Confidence 21 233466666666666665 366666 57888887663 2324444 44457887777754221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012124 353 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 432 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~ 432 (470)
++++..+ .+++++|.+.|.+. |+.+..|.+|+|+++++.+.... ..+ ....+.+++.+|+++.||.+.|+..
T Consensus 315 ~~~~~~~----~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~-~~~--~~~~~~~~a~~L~~e~GV~~~~~~~ 386 (460)
T PRK13238 315 EDYLAYR----IGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPH-IPA--EQFPAQALACELYLEAGIRGVEIGS 386 (460)
T ss_pred hHHHHHH----HHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCC-CCC--CCCchHHHHHHHHHHcCeeeecccc
Confidence 3344443 33578999999887 99999999999999998643100 000 0013578999999999999999988
Q ss_pred CCC-------------CCcEEEEeec---CHHHHHHHHHHHHHHHH
Q 012124 433 FGD-------------DTCIRISYAA---SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 433 f~~-------------~~~iRls~~~---~~~~i~~~l~~l~~~l~ 462 (470)
|.. ...+||++.. +.+.++.+.++|+++.+
T Consensus 387 f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 387 LLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred eecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 752 2579999998 99999999999998764
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-37 Score=271.11 Aligned_cols=349 Identities=19% Similarity=0.325 Sum_probs=276.5
Q ss_pred CeEEccCCCCCCCC--hHHHHHHHHHHHHcC-----CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 95 SVIRLAAGEPDFDT--PVLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 95 ~~i~l~~g~~~~~~--~~~~~~a~~~~~~~~-----~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+.|.|+.|+|..-+ .+.+.+...+.+..+ ..+|..++|...|.++++..+++++|+..+++||.+|+|+|.++
T Consensus 31 g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~f 110 (417)
T COG3977 31 GAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAF 110 (417)
T ss_pred CceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchH
Confidence 47999999998655 344555666655543 57899999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC---CC--CeEEEc-CCCCCChHHHHHHcCCEEE---EecCcCCCC--CccCHHhHhhhccCCceEEEEcCC
Q 012124 168 LQAVLAVCS---PG--DEVIIP-APFWVSYPEMARIADATPV---ILPTRISEN--FLLDPKVLESKLTEKSRLLILCSP 236 (470)
Q Consensus 168 ~~~~~~l~~---~g--d~Vlv~-~p~y~~~~~~~~~~g~~~~---~v~~~~~~~--~~~d~~~l~~~l~~~~~~i~l~~p 236 (470)
+.++..|.. .| ..|+++ .|.|.+|-++--.-.+-+. .+...+.+. +.+|+++|. +.+.+.+|+++-|
T Consensus 111 FYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRP 188 (417)
T COG3977 111 FYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRP 188 (417)
T ss_pred HHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcc--cccccceEEecCC
Confidence 999988853 34 345554 8999988754221111110 111222333 345666664 3578899999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccc--cccc-CCCCCceEEEeccCcccccccceeeEE
Q 012124 237 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS--FASL-PGMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 237 ~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~--~~~~-~~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
.||||.+++.+++.+|.++|++| |+.+|+|.+|+. +.+. +.+. .-..+++|.+.|+||. |+||.|+|.+
T Consensus 189 tNPTGNVlTdeE~~kldalA~~~-giPliIDnAYg~------PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIi 260 (417)
T COG3977 189 TNPTGNVLTDEELAKLDALARQH-GIPLIIDNAYGV------PFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGII 260 (417)
T ss_pred CCCCCCcccHHHHHHHHHHhhhc-CCcEEEecccCC------CCCceecccccccCCCCEEEEeehhhc-CCCCcceeEE
Confidence 99999999999999999999999 999999999974 1111 1111 1125899999999996 7999999999
Q ss_pred EcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCC--CeecCCCceEE
Q 012124 314 AGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEG--VKMSEPQGAFY 390 (470)
Q Consensus 314 ~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g--~~~~~~~~g~~ 390 (470)
++.++++..+.......+..+..+++++++.+++.|.+..-.-+-++..|+++.+...+.|++ +|. +.++.|++.+|
T Consensus 261 Iane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIF 340 (417)
T COG3977 261 IANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIF 340 (417)
T ss_pred EccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCccee
Confidence 999999999999998889999999999999999998763333345678899999998888877 443 66789999999
Q ss_pred EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---------CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 391 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---------~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
+|+.+.+.. .+..++.++|.++ ||.+.||..|.. ..++|+++..++++|++++++|++.+
T Consensus 341 lWLWf~dLP----------Itt~~LYq~LKa~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~v 409 (417)
T COG3977 341 LWLWFKDLP----------ITTEELYQRLKAR-GVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEV 409 (417)
T ss_pred ehhhhccCC----------CCHHHHHHHHHhC-eEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHH
Confidence 998876642 2789999998766 999999999864 24899999999999999999999988
Q ss_pred Hhh
Q 012124 462 LTL 464 (470)
Q Consensus 462 ~~~ 464 (470)
+++
T Consensus 410 e~~ 412 (417)
T COG3977 410 ERA 412 (417)
T ss_pred HHH
Confidence 765
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-35 Score=267.18 Aligned_cols=348 Identities=23% Similarity=0.369 Sum_probs=277.9
Q ss_pred hHHHHHHHHHHHHc---CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEc
Q 012124 109 PVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIP 184 (470)
Q Consensus 109 ~~~~~~a~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~ 184 (470)
|.++++...+.+.. ....|+.++|.+-+|+.+|+|+.++-|++++|++|++|+|++.++..++..++ .+.|.|+++
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliP 167 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIP 167 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEee
Confidence 55566666666654 46789999999999999999999999999999999999999999999999875 567999999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-----CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012124 185 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 259 (470)
Q Consensus 185 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~ 259 (470)
-|.||-|...+..+|+..+++-++++.+|.+|.++|++.+++ +++++++.||.||||+++|.+.+++|+.+|.++
T Consensus 168 iPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~ 247 (475)
T KOG0258|consen 168 IPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE 247 (475)
T ss_pred cCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999988853 788999999999999999999999999999999
Q ss_pred CCEEEEEeccccccccCCC-Ccccccc----cCCC---CCceEEEeccCccc-ccccceeeEEE---cCHHHHHHHHHHh
Q 012124 260 PRLLVLSDEIYEHIIYAPA-THTSFAS----LPGM---WERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQ 327 (470)
Q Consensus 260 ~~~~iI~Dd~~~~~~~~~~-~~~~~~~----~~~~---~~~~i~i~S~sK~~-~~~G~r~G~~~---~~~~~~~~l~~~~ 327 (470)
+++++.||+|.+-.|... ...++.. +.+. .-..+.++|.||.+ +=.|.|-||+- .+++..+.+.+..
T Consensus 248 -~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~ 326 (475)
T KOG0258|consen 248 -GLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLA 326 (475)
T ss_pred -CeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHH
Confidence 999999999999888753 3334332 2211 22356788889998 55889999965 4667777776665
Q ss_pred hhccCCCChHHHHHHHHHHhcCCCC-------hHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeec--cCc
Q 012124 328 SQFTSGASSISQKAGVAALGLGYAG-------GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF--STY 398 (470)
Q Consensus 328 ~~~~~~~~~~~q~a~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~--~~~ 398 (470)
. ...|++..+|.......+-..-+ ....+.+.+.++.|...+.+.++.++|+.+.+++|.||+|.++ |..
T Consensus 327 s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~k 405 (475)
T KOG0258|consen 327 S-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPK 405 (475)
T ss_pred h-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHH
Confidence 4 35577888888777666532211 2224567778899999999999999999999999999998654 432
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC-C--cEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD-T--CIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~-~--~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
..+++...+...+...+.+|++..||++.||+.||.. | |+|.++-... + +.+++++++-.
T Consensus 406 -aie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~ 468 (475)
T KOG0258|consen 406 -AIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHA 468 (475)
T ss_pred -HHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHH
Confidence 1233333444567778899999999999999999964 3 7998887644 3 66666665543
No 110
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.7e-34 Score=286.93 Aligned_cols=335 Identities=19% Similarity=0.169 Sum_probs=252.5
Q ss_pred cCCCeEEccCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 92 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~y~---~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+|+++|+|+.|+ |++++++.+.+++.+.+......|. ...|..++++++++++.+.+|. +++|++|+| ++++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~ 115 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDAN 115 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHH
Confidence 678899999998 7888889999999998865333332 3478999999999999988884 378888888 6788
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcc
Q 012124 168 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTG 241 (470)
Q Consensus 168 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG 241 (470)
..++.++++|||+|++++|+|+++...++..|++++.++. .|++.+++.+++ ++++|++.+.+||||
T Consensus 116 ~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G 188 (397)
T PRK06939 116 GGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDG 188 (397)
T ss_pred HHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCC
Confidence 8889999999999999999999999999999999888764 478888887753 566677666789999
Q ss_pred cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCC--cccccccCCCCCceEEEeccCcccccccceeeEEEcCHHH
Q 012124 242 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT--HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 319 (470)
Q Consensus 242 ~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~--~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~ 319 (470)
...+ +++|.++|++| +++||+||+|+...+.... ......+. .+.+++++||||.++ |+|+||+++++++
T Consensus 189 ~~~~---~~~l~~la~~~-~~~li~De~~~~g~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~--g~r~G~v~~~~~~ 260 (397)
T PRK06939 189 DIAP---LPEICDLADKY-DALVMVDDSHAVGFVGENGRGTVEHFGVM--DRVDIITGTLGKALG--GASGGYTAGRKEV 260 (397)
T ss_pred CcCC---HHHHHHHHHHh-CCEEEEECcccccCcCCCCCCHHHHcCCC--CCCcEEEEECHHHhC--ccCceEEEeCHHH
Confidence 8666 89999999999 9999999999642222111 11222222 245799999999994 4599999999999
Q ss_pred HHHHHHHhhhcc--CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC
Q 012124 320 VAACNKIQSQFT--SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 397 (470)
Q Consensus 320 ~~~l~~~~~~~~--~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~ 397 (470)
++.+........ ...++..+.++.++++. .....++++.++++++++.+.|+++ |+++..+.++++ ++.++.
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~-~~~~~~ 334 (397)
T PRK06939 261 IDWLRQRSRPYLFSNSLAPAIVAASIKVLEL----LEESDELRDRLWENARYFREGMTAA-GFTLGPGEHPII-PVMLGD 334 (397)
T ss_pred HHHHHHhCccccccCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEE-EEEECC
Confidence 998876543222 22234445555555543 1123567888999999999999887 676666666664 334543
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~----~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
.. +..++++.|+++ ||.+.++. |.. .+++|++++. ++++|++++++|+++++++
T Consensus 335 ~~-----------~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 335 AK-----------LAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HH-----------HHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 21 567899998877 99998644 421 3589999864 8999999999999998765
No 111
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=2.2e-33 Score=279.84 Aligned_cols=333 Identities=18% Similarity=0.192 Sum_probs=249.6
Q ss_pred cCCCeEEccCCCC-CCCChHHHHHHHHHHHHcCCCCCCCCc---Cc----HHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 92 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFTRYTPNA---GT----LELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 92 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~y~~~~---g~----~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
+|+++|+|+.|++ ++++++.+++++.+++.+...+|+++. |. .+|++++++++. .+++++++|+
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii~~~~ 107 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTILYASC 107 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEEECch
Confidence 5678999999994 888889999999999876434676666 76 677778887763 2578888999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCC
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 237 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~ 237 (470)
++++..++.+++++||.|++++|.|+++...++..+.+.+.++ . +|++.+++.+++ ++++|++.+++
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~----~---~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 180 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA----N---NDMADLEAQLKEARAAGARHRLIATDGVF 180 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC----C---CCHHHHHHHHHhhhhcCCCceEEEEeCCc
Confidence 9999999999999999999999999999998888888776554 1 689999988864 67788888889
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc-CCCCCceEEEeccCcccccccceeeEEEcC
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGP 316 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~-~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~ 316 (470)
||||.+.+ +++|+++|++| |++||+||+|+...++... ...... +-..+.+++++||||.+ +|+|+||++++
T Consensus 181 ~~tG~~~~---l~~i~~la~~~-~~~li~De~~~~g~~~~~~-~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~ 253 (393)
T TIGR01822 181 SMDGVIAP---LDEICDLADKY-DALVMVDECHATGFLGPTG-RGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTAR 253 (393)
T ss_pred cCCCCcCC---HHHHHHHHHHc-CCEEEEECCccccCcCCCC-CchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeC
Confidence 99999988 88999999999 9999999999643332211 111111 11124679999999987 46899999999
Q ss_pred HHHHHHHHHHhhhccC--CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeee
Q 012124 317 KHFVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 394 (470)
Q Consensus 317 ~~~~~~l~~~~~~~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~ 394 (470)
+++++.+........+ +.++..+.++.++++. .+..++++++++++++++.+.|++. |+.+..+.+.+ +.+.
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~i~ 327 (393)
T TIGR01822 254 KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEM----LEASNELRDRLWANTRYFRERMEAA-GFDIKPADHPI-IPVM 327 (393)
T ss_pred HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEE
Confidence 9999988764332222 2344445555666653 2234667888999999999999876 77765544444 4445
Q ss_pred ccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--C--CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 395 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--D--DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--~--~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+++.. +..++++.|+++ ||.+. +..|. . ..++|++++. ++++|++++++|++++++++
T Consensus 328 ~~~~~-----------~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 328 LYDAV-----------LAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred eCCHH-----------HHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 54321 567888888876 89887 54443 1 2469988876 89999999999999887653
No 112
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=4.3e-33 Score=269.99 Aligned_cols=308 Identities=20% Similarity=0.240 Sum_probs=237.8
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEc
Q 012124 105 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 184 (470)
Q Consensus 105 ~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~ 184 (470)
.+..++.++++..+++.. |+ |..++.+.+.+.+.+.+|. +++++++++|+.+++..++.++++|||.|+++
T Consensus 31 gl~~~~~~~~~~~~~~~~----~~---g~~~~~~~Le~~lA~~~g~--~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~ 101 (346)
T TIGR03576 31 GLAGGFKIDEEDLELLET----YV---GPAIFEEKVQELGREHLGG--PEEKILVFNRTSSAILATILALEPPGRKVVHY 101 (346)
T ss_pred cCCCChhHHHHHHHHHHH----hc---CCHHHHHHHHHHHHHHcCC--CcceEEEECCHHHHHHHHHHHhCCCCCEEEEC
Confidence 344578888888887765 32 5567777777777777774 67899999999999999999999999999974
Q ss_pred ---CCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012124 185 ---APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261 (470)
Q Consensus 185 ---~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~ 261 (470)
.|+|+.+...++..|++++.+ .+++.++. .+++++|++ +++||+|.+++.+++++|+++|+++ |
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~-~ 168 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSK-E 168 (346)
T ss_pred CCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHc-C
Confidence 579999999999999986432 14555433 245777777 4579999999999999999999999 9
Q ss_pred EEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHH
Q 012124 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKA 341 (470)
Q Consensus 262 ~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a 341 (470)
++||+||+|+.+..+.....+...+ +..++++|||| +++|+|+||+++++++++.+.+....+.++.+++.|.+
T Consensus 169 ~~livDEAy~~~~~~~~~~~~~~~~----~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~a 242 (346)
T TIGR03576 169 AIVLVDDASGARVRRLYGQPPALDL----GADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAA 242 (346)
T ss_pred CEEEEECCccccccccCCCCCHHHc----CCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHH
Confidence 9999999999865331111222222 22377889999 46899999999999999999998888777788999999
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHH
Q 012124 342 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 421 (470)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 421 (470)
+.++|+. .. .+.+++.++++++++.+.+++ +.+.++.++ |+|++++.. ++.+++..+++
T Consensus 243 a~~aL~~---~~--~~~~~~~l~~r~~~~~~~l~~---~~~~~~~~~-f~~~~~~~~------------~~~~~~~~ll~ 301 (346)
T TIGR03576 243 VVRALEE---FE--LSRIRDAFKRKEEVYLRLFDK---LNVERTPTG-FVIKGVEEE------------KLIEIGLDLLR 301 (346)
T ss_pred HHHHHhh---cc--HHHHHHHHHHHHHHHHHHHHh---CCCCcCCCe-EEEEeCCCC------------CHHHHHHHHHH
Confidence 9999974 12 356678889999988888874 344444555 699998642 45567777888
Q ss_pred cCCEEEECCCCCC-CCCcEEEEeecCHH---HHHHHHHHHHHHH
Q 012124 422 KAQVALVPGDAFG-DDTCIRISYAASLT---TLQAAVERIKKGL 461 (470)
Q Consensus 422 ~~gI~v~pg~~f~-~~~~iRls~~~~~~---~i~~~l~~l~~~l 461 (470)
++||.+.||..|. .++|+|++++.+++ +++.+++.|++-+
T Consensus 302 ~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 302 NYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred hCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 8899999998884 47899999998665 6888888887643
No 113
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=2.5e-33 Score=276.28 Aligned_cols=331 Identities=15% Similarity=0.156 Sum_probs=243.8
Q ss_pred hcCCCeEEccCCCC-CCCChHHHHHHHHHHHHcCCC---CCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 91 QAGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFT---RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 91 ~~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~---~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
.+|+++|||+.|+| +++.++.+.+++.+++..... .|....|..++++.+.+.+.+.++ .+++|++++|+++.
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~G~~~~ 89 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG---TEAALLFSSGYLAN 89 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCCEEEECchHHHH
Confidence 36778999999975 344578899999998865222 222234444444444444444344 35688888886655
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC----CceEEEEcCCCCCccc
Q 012124 167 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGS 242 (470)
Q Consensus 167 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~i~l~~p~nPtG~ 242 (470)
+ .++..++++||+|++++|+|+.+...++..|++++.++. +|++.+++.+++ +++++++++++||||.
T Consensus 90 ~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 90 V-GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGD 161 (360)
T ss_pred H-HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCC
Confidence 5 567788899999999999999999999999999988763 588999888854 4677888889999999
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc--ccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHH
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~--~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~ 320 (470)
..+ +++|.++|+++ +++||+||+|..+.++.... .....+.+ .+++|+++||||.++++| ||++++++++
T Consensus 162 ~~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~g---G~~~~~~~~~ 233 (360)
T TIGR00858 162 IAP---LPQLVALAERY-GAWLMVDDAHGTGVLGEDGRGTLEHFGLKP-EPVDIQVGTLSKALGSYG---AYVAGSQALI 233 (360)
T ss_pred CcC---HHHHHHHHHHc-CcEEEEECcccccCcCCCCCchHHhcCCCc-cCCcEEEEechhhhhccC---cEEEcCHHHH
Confidence 888 88899999999 99999999998766543211 22222333 478999999999998656 9999999999
Q ss_pred HHHHHHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCc
Q 012124 321 AACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 398 (470)
Q Consensus 321 ~~l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~ 398 (470)
+.+......+ ..+.++..+.++.++++. ....++++++++++++.+.+.|+++ ++.+.++ .+.++|+.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~~~ 307 (360)
T TIGR00858 234 DYLINRARTLIFSTALPPAVAAAALAALEL----IQEEPWRREKLLALIARLRAGLEAL-GFTLMPS-CTPIVPVIIGDN 307 (360)
T ss_pred HHHHHhCccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHHHHHHHHHHHHHHc-CCccCCC-CCCEEEEEeCCH
Confidence 8886544332 223455555566666753 2234567889999999999999987 6766544 456688888653
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHH
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
. +..+++++|.++ ||.+.++..++. .+++|++++. +++++++++++|+
T Consensus 308 ~-----------~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 308 A-----------SALALAEELQQQ-GIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred H-----------HHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 1 567888888765 999998766542 3589999996 8999999998763
No 114
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=8.2e-33 Score=274.97 Aligned_cols=337 Identities=20% Similarity=0.216 Sum_probs=254.6
Q ss_pred cCCCeEEccCCC-CCCCChHHHHHHHHHHHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 92 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+|++++||+.|+ +++.+++.+.+++.+++.+. ...|....|..++++.+++++.+.+|. ++.|++++|+ +++
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG~-~a~ 106 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSGF-NTN 106 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcHH-HHH
Confidence 567889999987 68878899999999988642 345777889999999999999988773 4578888885 556
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC----CceEEEEcCCCCCcccC
Q 012124 168 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSV 243 (470)
Q Consensus 168 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~i~l~~p~nPtG~~ 243 (470)
..++.+++++||.|++++|+|+.+...+...|.+++.++ .+|++.+++.+++ ++++|++++++||||..
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~ 179 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDV 179 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCc
Confidence 678888899999999999999999888888888887664 2688888877643 67788888889999999
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHH
Q 012124 244 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 323 (470)
Q Consensus 244 ~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l 323 (470)
.+ +++|.++|++| |+++|+||+|+.+.++.........++-..+.+++++||||.++++| ||+++++++++.+
T Consensus 180 ~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~ 252 (385)
T TIGR01825 180 AP---LPEIVELAERY-GAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYL 252 (385)
T ss_pred cC---HHHHHHHHHHh-CCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHH
Confidence 98 78899999999 99999999998766542211111111112478899999999998665 9999999999988
Q ss_pred HHHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCC
Q 012124 324 NKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 401 (470)
Q Consensus 324 ~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~ 401 (470)
......+ ....+++.+.++.++++.. .+. .+..++++++++++.+.|+++ |+++..+.+.+ +++.++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~~~-- 324 (385)
T TIGR01825 253 KNRARPFLFSTAQPPAVVAALAAAVDEL---QRS-PELMERLWDNTRFFKAGLGKL-GYDTGGSETPI-TPVVIGDEK-- 324 (385)
T ss_pred HHhCccccccCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEECCHH--
Confidence 7654322 2234667777777777641 111 245666778889999999887 88877666665 444444221
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 402 ~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~----~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+..++++.|+++ ||.+. +..|.. .+++|++++. +++++++++++|+++++++.
T Consensus 325 ---------~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 383 (385)
T TIGR01825 325 ---------AAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 383 (385)
T ss_pred ---------HHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 456788988887 99885 444432 2589998763 99999999999999987643
No 115
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=4.8e-33 Score=280.86 Aligned_cols=351 Identities=20% Similarity=0.259 Sum_probs=262.1
Q ss_pred cCCCeEEccCCC-CCCCChHHHHHHHHHHHHcCC-------CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 92 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 92 ~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~-------~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
+|++++||++++ +++..++.+++++.+++.+.. ..|++..+..+|+++|++++. .++.|++++|.
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~ 179 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGL 179 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHH
Confidence 567899999886 577779999999999998722 235666678889999998874 45789999888
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhc--cCCc-eEEEEcCCCCCc
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKS-RLLILCSPSNPT 240 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l--~~~~-~~i~l~~p~nPt 240 (470)
+ ++..++.+++++||.|+++...|..+...+...|.+++.++.++.+++..+++.+++.. ++++ ++|++..++|+|
T Consensus 180 ~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 180 S-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred H-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 8 56888999999999999988877777778888999999998753332223333333222 1234 677888889999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc--cccccCCCCCceEEEeccCcccccccceeeEEEcCHH
Q 012124 241 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT--SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318 (470)
Q Consensus 241 G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~--~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~ 318 (470)
|.+.+ +++|.++|++| |+++|.||+|+...++..+.. ....+.. .+..|+++||||.+|++| ||++++++
T Consensus 259 G~i~~---L~~i~~l~~k~-~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~-~~~dii~~s~sKalg~~G---G~i~g~~~ 330 (481)
T PLN02822 259 GQIAP---LDEIVRLKEKY-RFRVLLDESNSFGVLGKSGRGLSEHFGVPI-EKIDIITAAMGHALATEG---GFCTGSAR 330 (481)
T ss_pred CCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCChHHHcCCCC-CCCeEEEecchhhhhhCC---eEEEcCHH
Confidence 99999 88999999999 999999999997767532221 1112221 256799999999999888 99999999
Q ss_pred HHHHHHHHhhhccCCC--ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeecc
Q 012124 319 FVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 396 (470)
Q Consensus 319 ~~~~l~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~ 396 (470)
+++.+........++. ++..|.++.++|+. .+. ..++++.++++++++.+.|++.+|+.+..+.+++++++.++
T Consensus 331 ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~---l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~ 406 (481)
T PLN02822 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLE 406 (481)
T ss_pred HHHHHHhcCCceeeccccCHHHHHHHHHHHHH---HHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeC
Confidence 9998876555555554 47778888888864 122 25788899999999999999877888877778888999886
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC--CCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD--AFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~--~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+..+. .. +......+++++|++++||.+.|+. .|+. +.++|++++. ++++|++++++|+++++++.
T Consensus 407 ~~~~~-~~--~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 407 KSTGS-AK--EDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred CCccc-cc--chHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 42100 00 0000136788999866799999863 3432 3579998774 99999999999999988754
No 116
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=4.9e-33 Score=274.33 Aligned_cols=352 Identities=18% Similarity=0.173 Sum_probs=265.4
Q ss_pred HHHHHhcCCCeEEccCCCC--CCCCh---HHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEe
Q 012124 86 ATALAQAGVSVIRLAAGEP--DFDTP---VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS 160 (470)
Q Consensus 86 ~~~~~~~~~~~i~l~~g~~--~~~~~---~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it 160 (470)
.+.+.+.|.+++.|..+++ |+.++ .++.++..+++..+...|++..|.++|++++++++. .+++++|
T Consensus 3 ~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t 74 (431)
T cd00617 3 ERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFG--------FKHIIPT 74 (431)
T ss_pred HHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHC--------CCeEEEc
Confidence 4566778999999999999 77665 477777777777777789999999999999999973 2589999
Q ss_pred cChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCC--------CccCHHhHhhhccCC----c
Q 012124 161 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN--------FLLDPKVLESKLTEK----S 228 (470)
Q Consensus 161 ~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~--------~~~d~~~l~~~l~~~----~ 228 (470)
+|+++|+.+++.++++|||+| +++|.|..+...+...|++++.++++++.+ +.+|++.|+++++++ +
T Consensus 75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~ 153 (431)
T cd00617 75 HQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENI 153 (431)
T ss_pred CCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCc
Confidence 999999999999999999988 689999999999999999999999975432 349999999999765 7
Q ss_pred eEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEEeccccc--ccc-----CCCCcccccccCCCCCceEEEeccC
Q 012124 229 RLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH--IIY-----APATHTSFASLPGMWERTLTVNGFS 300 (470)
Q Consensus 229 ~~i~l~~p~nPt-G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~--~~~-----~~~~~~~~~~~~~~~~~~i~i~S~s 300 (470)
++|++++|+||+ |.++|.+++++|.++|++| |++||+|++... ..| ++....++. +.++.+.|++
T Consensus 154 ~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~-gi~li~DaAr~~~na~~i~~r~~g~~~~si~------ei~~e~~s~s 226 (431)
T cd00617 154 PYIVLTITNNTAGGQPVSMANLREVRELAHKY-GIPVVLDAARFAENAYFIKEREEGYRDKSIA------EIAREMFSYA 226 (431)
T ss_pred cEEEEECCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhhHhhhhhhhcccccccCCCHH------HHHHHhhccC
Confidence 889999999998 9999999999999999999 999999999432 112 122222222 2345578888
Q ss_pred cccccccce------eeEEEcCH-HHHHHHHHHh----hhccCC-CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 012124 301 KAFAMTGWR------LGYIAGPK-HFVAACNKIQ----SQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 368 (470)
Q Consensus 301 K~~~~~G~r------~G~~~~~~-~~~~~l~~~~----~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (470)
|.+.+.|+| .||+++++ +++++++... ....++ .+.....+++..|.... + .+.+.++++ +++
T Consensus 227 d~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~--~--~~~l~~~~~-~r~ 301 (431)
T cd00617 227 DGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV--E--EDYLRHRVE-QVR 301 (431)
T ss_pred CEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc--c--HHHHHHHHH-HHH
Confidence 888888887 56999986 5888876432 111112 23333333333565421 1 233444444 558
Q ss_pred HHHHHhccCCCCeecCCCceEEEeeeccCccCC-cccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCC-C-----------
Q 012124 369 FLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGKIENSESLCRYLLDKAQVALVP-GDAF-G----------- 434 (470)
Q Consensus 369 ~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~gI~v~p-g~~f-~----------- 434 (470)
++.+.|.+. |+.+..|.+|+++|++.+..... .... .++.+++.+|+++.||.+.- |... +
T Consensus 302 ~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~~~~~----~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~ 376 (431)
T cd00617 302 YLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIPQEQ----FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYP 376 (431)
T ss_pred HHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCCCccc----CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCC
Confidence 899999988 99999999999999998753110 0001 15889998999999998654 4321 1
Q ss_pred CCCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012124 435 DDTCIRISYAA---SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 435 ~~~~iRls~~~---~~~~i~~~l~~l~~~l~~ 463 (470)
....+||++.. +.+.++...+.|..++++
T Consensus 377 ~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 377 ELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred ccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 12579999986 889999999999888764
No 117
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1.8e-31 Score=265.49 Aligned_cols=332 Identities=19% Similarity=0.193 Sum_probs=243.2
Q ss_pred cCCCeEEccCCCC-CCCChHHHHHHHHHHHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 92 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+|+++|||+.|++ ++.+++.+++++.+++... ...|....|..++++.+++.+.+.+| .++.|++++| ++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~g-~~~~ 112 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFSSG-YAAN 112 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-HHHH
Confidence 5778999999974 4556788999999988652 22233344666677777777766666 2455555554 5566
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCC
Q 012124 168 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVY 244 (470)
Q Consensus 168 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~ 244 (470)
..++..++++||.|++++|+|+.+...++..|++++.++. .|++.+++.+++ +++++++.+++||||...
T Consensus 113 ~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~ 185 (385)
T PRK05958 113 LAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDGDLA 185 (385)
T ss_pred HHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC
Confidence 6677888999999999999999999999999999988875 378889888864 245555667899999988
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCC--CcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 322 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~--~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~ 322 (470)
+ +++|+++|++| |++||+||+|+.+.++.. .......++. .+++|++.||||.++++| ||+++++++++.
T Consensus 186 ~---l~~i~~ia~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~ 257 (385)
T PRK05958 186 P---LAELVALARRH-GAWLLVDEAHGTGVLGPQGRGLAAEAGLAG-EPDVILVGTLGKALGSSG---AAVLGSETLIDY 257 (385)
T ss_pred C---HHHHHHHHHHh-CCEEEEECcccccccCCCCCchHHhhCCCC-CCceEEEEechhhcccCC---cEEEcCHHHHHH
Confidence 8 88999999999 999999999987655421 1122122332 467899999999998666 999999998888
Q ss_pred HHHHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccC
Q 012124 323 CNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 400 (470)
Q Consensus 323 l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~ 400 (470)
+....... ..+.+++.+.++.++++.. ... .++.+.+.++++.+.+.|+++ |+++..+.+++ +|+.+++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~aa~~aal~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~~~~~~~~- 330 (385)
T PRK05958 258 LINRARPFIFTTALPPAQAAAARAALRIL---RRE-PERRERLAALIARLRAGLRAL-GFQLMDSQSAI-QPLIVGDNE- 330 (385)
T ss_pred HHHhCccceecCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCHH-
Confidence 76543222 2335555555566666641 111 567788899999999999887 67776666554 677776431
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC---CCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 401 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~---~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
+..++++.|.++ ||.+.++..+. .++++|++++. +++++++++++|+++
T Consensus 331 ----------~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 331 ----------RALALAAALQEQ-GFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ----------HHHHHHHHHHHC-CceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 567899988765 99999865443 23689999984 899999999999875
No 118
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=267.96 Aligned_cols=338 Identities=17% Similarity=0.191 Sum_probs=247.0
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+|||..|.+. +.. ++.+.+++.+++..... ....+..++++.+++++.+..| .+++++|+|+++++.
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIH--TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAEANE 110 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHHHHH
Confidence 57788999998654 334 58899999998865321 1222346899999999987644 379999999999999
Q ss_pred HHHHHhcCCC-------CeEEEcCCCCCChHHHHHHcCCEE-E---EecCcCCCCC----ccCHHhHhhhccCCceEEEE
Q 012124 169 QAVLAVCSPG-------DEVIIPAPFWVSYPEMARIADATP-V---ILPTRISENF----LLDPKVLESKLTEKSRLLIL 233 (470)
Q Consensus 169 ~~~~~l~~~g-------d~Vlv~~p~y~~~~~~~~~~g~~~-~---~v~~~~~~~~----~~d~~~l~~~l~~~~~~i~l 233 (470)
.+++.+...+ ++|++.+++|+++.......+... . ..++. .++ ..|++.+++++++++++|++
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~vii 188 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKTAAVML 188 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCeEEEEE
Confidence 9999765433 679999999998876554443322 1 11211 111 12899999999888999999
Q ss_pred cCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE
Q 012124 234 CSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312 (470)
Q Consensus 234 ~~p~nPtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~ 312 (470)
..++||+| .+++.+.+++|.++|++| +++||+||+|.+|.+.+.. .++....- ... +.||||.++ +|+|+||
T Consensus 189 ~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DE~~~g~g~~g~~-~~~~~~~~-~pd---i~t~sK~~~-~G~rig~ 261 (396)
T PRK02627 189 EPIQGEGGVNPADKEYLQALRELCDEN-GILLILDEVQTGMGRTGKL-FAYQHYGI-EPD---IMTLAKGLG-GGVPIGA 261 (396)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhcCCCccCce-eeehhcCC-CCC---EEEEcchhh-CCcccEE
Confidence 88899999 689999999999999999 9999999999987655421 12111111 112 457999998 9999999
Q ss_pred EEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEe
Q 012124 313 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 392 (470)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~ 392 (470)
+++++++++.+.......+++.+++.|.++.++|+.... +++.++.++..+..++.+.+.+.+++.+... +..|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~ 339 (396)
T PRK02627 262 VLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIG 339 (396)
T ss_pred EEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEE
Confidence 999999998887655556778999999999999875332 3445555555555555555554444333322 23577789
Q ss_pred eeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012124 393 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
++++. +..+++++|+++ ||.+.|+. .+++|++++ .+++++++++++|+++++++
T Consensus 340 i~~~~-------------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 340 IELDR-------------PAAEIVKKALEK-GLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred EEecC-------------cHHHHHHHHHHC-CeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 98842 677899988877 99999864 368999875 49999999999999998764
No 119
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-32 Score=248.38 Aligned_cols=359 Identities=17% Similarity=0.198 Sum_probs=272.4
Q ss_pred ccccCCchHHHHHHHHHHHHhcCC-CeEEccCCCCC---CCC--hHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHH
Q 012124 71 VNAVKPSKTVAITDQATALAQAGV-SVIRLAAGEPD---FDT--PVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHK 143 (470)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~~g~~~---~~~--~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~ 143 (470)
+...++.++..+.+.. .++++ +.|||+.|.-- -.+ -+.+.++-+..+.+ ....|.|..|.+++++++++.
T Consensus 5 i~~~p~DpIlgL~e~f---~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l 81 (396)
T COG1448 5 IEAAPADPILGLKEAF---KADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL 81 (396)
T ss_pred cccCCCCchhHHHHHH---hcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH
Confidence 3444555555554443 33333 67999999621 112 35555555555544 357899999999999999999
Q ss_pred HHHHcCCC---CCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccC
Q 012124 144 LKEENGLS---YTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 216 (470)
Q Consensus 144 l~~~~g~~---~~~~~i--~it~g~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 216 (470)
+ +|.+ +..++| +-|.|++.||.+....+. .|..+|++++|+|+++..+++..|.++..+|.....+..+|
T Consensus 82 l---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~d 158 (396)
T COG1448 82 L---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLD 158 (396)
T ss_pred h---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccccccccc
Confidence 8 6744 344444 568899999998887763 46678999999999999999999999999999877777799
Q ss_pred HHhHhhhccC--CceEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC-CcccccccCCCCCc
Q 012124 217 PKVLESKLTE--KSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMWER 292 (470)
Q Consensus 217 ~~~l~~~l~~--~~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~-~~~~~~~~~~~~~~ 292 (470)
++.+...++. ...+|++ ...|||||..++.++|++|+++.++. +.+.+.|-+|.+|.-+-. +...+..+......
T Consensus 159 f~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~ 237 (396)
T COG1448 159 FDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE 237 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhhhccchHHHHHHHHHHHHhCCc
Confidence 9999888854 3334444 55699999999999999999999999 999999999999654321 22233333332344
Q ss_pred eEEEeccCcccccccceeeEEEc---CHH----HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHH---HHHHHHH
Q 012124 293 TLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKA 362 (470)
Q Consensus 293 ~i~i~S~sK~~~~~G~r~G~~~~---~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~---~~~~~~~ 362 (470)
+++..||||+||+.|-|+|.+.. +.+ +...+....+...++||..+...++..|++.++...| +..++.+
T Consensus 238 ~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~R 317 (396)
T COG1448 238 LLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQR 317 (396)
T ss_pred EEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999998653 333 4445566666677789999999999999876543344 6788999
Q ss_pred HHHHHHHHHHHhccC-C--CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012124 363 FRERRDFLVKSFGEL-E--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 439 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~-~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~i 439 (470)
+.+.|+.|.+.|++. + .+.+...+.|||.+..+ + .+-+.+|.+++||++....
T Consensus 318 i~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl---------------s-~~QV~rLree~~IY~v~sG-------- 373 (396)
T COG1448 318 ILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL---------------S-PEQVDRLREEFGIYLVASG-------- 373 (396)
T ss_pred HHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC---------------C-HHHHHHHHHhccEEEecCC--------
Confidence 999999999999883 2 37888889999887644 3 3445678999999988754
Q ss_pred EEEeec-CHHHHHHHHHHHHHH
Q 012124 440 RISYAA-SLTTLQAAVERIKKG 460 (470)
Q Consensus 440 Rls~~~-~~~~i~~~l~~l~~~ 460 (470)
|+|++. ++..++...+.|.++
T Consensus 374 Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 374 RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred eeeeccCChhhHHHHHHHHHhh
Confidence 999999 999999998888765
No 120
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=9.2e-31 Score=261.12 Aligned_cols=333 Identities=20% Similarity=0.200 Sum_probs=243.6
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcC--CCCCCCC-------cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~--~~~y~~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+.+.|..+.-. ++|+.+.+++.+.+... ...++.. ....++|+.+++++ |.. ++++|++|+|+++
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAP-DAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCChHH
Confidence 45777776655 35778888888877532 1122221 12345777777775 431 4689999999999
Q ss_pred HHHHHHHHh----cCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCC
Q 012124 166 SILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 237 (470)
Q Consensus 166 al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~ 237 (470)
++++++.++ +++||+|++++|+|++ +...++..|++++.++++.+ +.+|++.++++++++++++++++++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv~i~~~~ 167 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD--LLPDIRQLPELLTPRTRILALGQMS 167 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC--CCcCHHHHHHHhccCceEEEEECcc
Confidence 999999987 4799999999999976 34556789999999998643 4589999999999899999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
||||..++ +++|+++|+++ |+++|+|++|+...+ ...+.. .+..+++.|++|.+|.+| +||+++++
T Consensus 168 n~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~~~~----~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 233 (398)
T TIGR03392 168 NVTGGCPD---LARAITLAHQY-GAVVVVDGAQGVVHG----PPDVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKT 233 (398)
T ss_pred ccccccCC---HHHHHHHHHHc-CCEEEEEhhhhcCCC----CCChhh----cCCCEEEEecccccCCCc--eEEEEEcH
Confidence 99999999 77899999999 999999999975322 122222 234578888999888555 89999999
Q ss_pred HHHHHHHHHh---------------------hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 012124 318 HFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 376 (470)
Q Consensus 318 ~~~~~l~~~~---------------------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 376 (470)
++++.+.... +.....++.....++.++++.- .+...+++.++.++.++++.+.|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l--~~~g~~~i~~~~~~l~~~l~~~l~~ 311 (398)
T TIGR03392 234 ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWL--TDIDIAAAEAWSVSLADLAEERLAQ 311 (398)
T ss_pred HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 8887663211 1111234444555555555421 0222456677778888999999988
Q ss_pred CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------CCCcEEEEeec--C
Q 012124 377 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--------DDTCIRISYAA--S 446 (470)
Q Consensus 377 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--------~~~~iRls~~~--~ 446 (470)
++|+.+..+..+..+++.+++. +..++.+.|.+ +||.+.+|..+. .++++|+|++. +
T Consensus 312 l~g~~~~~~~~~~i~~~~~~~~------------~~~~l~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t 378 (398)
T TIGR03392 312 LPGFRSFRCPGSSLLAFDFAGV------------HHSDLAALLAE-SGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT 378 (398)
T ss_pred CCCeEEeCCCCCcEEEEEeCCc------------CHHHHHHHHHh-CCEEEecCccchHHHHHHhCCCCEEEEEeeccCC
Confidence 8888776544445566677643 56788888765 599999987552 35799999986 8
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012124 447 LTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~~ 464 (470)
++|++.+++.|+++++.+
T Consensus 379 ~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 379 QQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988754
No 121
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=6.6e-31 Score=262.44 Aligned_cols=333 Identities=19% Similarity=0.212 Sum_probs=244.7
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCC--C-------CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT--P-------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~--~-------~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+.+.|..+.-. +.|+.+.+++.+.+.+...... . .....++|+.+++++ |.. ++++|++|+|+++
T Consensus 19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----NAP-DAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CCC-CCCEEEEECCHHH
Confidence 35777776655 3577888888888764221110 0 111345666666664 532 6789999999999
Q ss_pred HHHHHHHHh----cCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCC
Q 012124 166 SILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 237 (470)
Q Consensus 166 al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~ 237 (470)
++.+++.++ +++||+|++.+|.|++ +...++..|++++.++.+. ++.+|++.+++.++++++++++++++
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~i~~~~ 170 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRILALGQMS 170 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEEEEeCCc
Confidence 999999997 4799999999999976 3455678899999999863 45689999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
||||..++ +++|+++|+++ |+++|+|++|+...+ ...+.. .+..+++.|++|.+|.+| +||+++++
T Consensus 171 n~tG~~~~---~~~i~~l~~~~-g~~~ivD~a~~~g~~----~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 236 (401)
T PRK10874 171 NVTGGCPD---LARAITLAHQA-GMVVMVDGAQGAVHF----PADVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKS 236 (401)
T ss_pred ccccCcCC---HHHHHHHHHHc-CCEEEEECCcccccc----cCCchh----cCCCEEEEecccccCCCc--cEEEEEch
Confidence 99999999 78899999999 999999999964222 122222 235588899999888556 69999999
Q ss_pred HHHHHHHHHh---------------------hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 012124 318 HFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 376 (470)
Q Consensus 318 ~~~~~l~~~~---------------------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 376 (470)
++++.+.... .....+++...+.++.++++.- .+....++.++.++.++++.+.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l--~~~g~~~~~~~~~~l~~~l~~~l~~ 314 (401)
T PRK10874 237 ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWL--ADIDINQAESWSRSLATLAEDALAK 314 (401)
T ss_pred HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 8887654221 1112234555666666666531 0222445677777888999999998
Q ss_pred CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------CCCcEEEEeec--C
Q 012124 377 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--------DDTCIRISYAA--S 446 (470)
Q Consensus 377 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--------~~~~iRls~~~--~ 446 (470)
++|+.+..+..+.++++.+++. +..++.+.|.+ +||.+.+|..+. ..+++|+|++. +
T Consensus 315 ~~g~~~~~~~~~~i~~~~~~~~------------~~~~~~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt 381 (401)
T PRK10874 315 LPGFRSFRCQDSSLLAFDFAGV------------HHSDLVTLLAE-YGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT 381 (401)
T ss_pred CCCEEEeCCCCCcEEEEEECCc------------CHHHHHHHHHH-CCcEEeccccchHHHHHHhCCCCEEEEEecccCC
Confidence 8898776544444566677643 56788877755 599999988653 35899999997 8
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012124 447 LTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~~ 464 (470)
++|++.+++.|+++++.+
T Consensus 382 ~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 382 QSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988754
No 122
>PLN02721 threonine aldolase
Probab=100.00 E-value=6.6e-31 Score=258.29 Aligned_cols=328 Identities=19% Similarity=0.290 Sum_probs=230.1
Q ss_pred eEEccCCCCCCCChHHHHHHHHHH-HHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINA-IREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 174 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~-~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l 174 (470)
+++|+.|.|+. +++.+.+++.+. .......| .....+|++++++++.. +.+++++++++++..++.++
T Consensus 7 ~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 7 VVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHH
Confidence 47899999986 667788887764 22223334 33378999999999742 23455555555566777777
Q ss_pred cC-CCCeEEEcCCCCCChHH---HHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-------CCceEEEEcC-CCCCccc
Q 012124 175 CS-PGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT-------EKSRLLILCS-PSNPTGS 242 (470)
Q Consensus 175 ~~-~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-------~~~~~i~l~~-p~nPtG~ 242 (470)
++ +||+|++++|+|..... .+...|++++.+|.++ ++.+|+|.+++.++ +++++|++++ ++||||.
T Consensus 76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~ 153 (353)
T PLN02721 76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGR 153 (353)
T ss_pred ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCc
Confidence 77 99999999999875554 5678899999998753 34589999999997 5889999866 5789999
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE-EEcCHHHHH
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVA 321 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~-~~~~~~~~~ 321 (470)
++|.+++++|+++|+++ |++||+|++|........ ..+...+.. +...++.||||.++. ++|| +++++++++
T Consensus 154 ~~~~~~l~~l~~l~~~~-g~~livD~a~~~~~~~~~-~~~~~~~~~--~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~ 226 (353)
T PLN02721 154 CLSVEYTDKVGELAKRH-GLKLHIDGARIFNASVAL-GVPVHRLVK--AADSVSVCLSKGLGA---PVGSVIVGSKSFIR 226 (353)
T ss_pred cccHHHHHHHHHHHHHc-CCEEEEEchhhhcchhhh-CCCHHHHhh--hCCEEEEecccccCC---ceeeEEecCHHHHH
Confidence 99999999999999999 999999999853211100 111111111 222445679999862 3565 678999999
Q ss_pred HHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee--cCCCceEEEeeeccCcc
Q 012124 322 ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM--SEPQGAFYLFIDFSTYY 399 (470)
Q Consensus 322 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~g~~~~~~~~~~~ 399 (470)
.+...+.....+.+...+.++..... .+++.+++++. .++++.+.+.|++++++.+ ..+.++ ++|++++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~ 300 (353)
T PLN02721 227 KAKRLRKTLGGGMRQVGVLAAAALVA----LQENVPKLEDD-HKKAKLLAEGLNQIKGLRVNVAAVETN-IVYFDITDGS 300 (353)
T ss_pred hHHHHHHhcCCCeehhHHHHHHHHHH----HHHHHHHHHHH-HHHHHHHHHHHHhCCCcEEecCCccce-EEEEEccCCc
Confidence 88777665444444444333332222 13445544444 5567889999988877744 444444 5899987520
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
..+..+++++|.+ +||.+.|+. .+++|++++. +++++++++++|++++..
T Consensus 301 ---------~~~~~~~~~~L~~-~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 301 ---------RITAEKLCKSLEE-HGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred ---------cccHHHHHHHHHh-CCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 0157789998874 599999974 4689999973 899999999999988753
No 123
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=3.4e-31 Score=257.98 Aligned_cols=318 Identities=18% Similarity=0.234 Sum_probs=230.0
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 175 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~ 175 (470)
+|||+++..+. +++.+++++.+... ....|++..+..+|+++|++++ |+ +.+++++|+++++.+.+.+++
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~-~~~~Y~~~~~~~~L~~~la~~~----g~----~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPV-GDDVYGDDPTVNALQDYAAELS----GK----EAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccC-CCcccCCCHHHHHHHHHHHHHh----CC----CeEEEeCchHHHHHHHHHHhc
Confidence 47899999887 78889999877543 4567878889999999999985 32 345678888888888888889
Q ss_pred CCCCeEEEcCCCCCC-hHHH-HHHcC-CEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcccCCCH
Q 012124 176 SPGDEVIIPAPFWVS-YPEM-ARIAD-ATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPK 246 (470)
Q Consensus 176 ~~gd~Vlv~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~~~s~ 246 (470)
.+||+|+++.|+|.. +... ....| ++++.++.+ .++.+|++.|++++++ ++++|++++|+ ||.+++.
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~ 146 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPR 146 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCH
Confidence 999999998888753 3211 23333 677888775 3567999999999865 58899998765 5999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceee-EEEcCHHHHHHHHH
Q 012124 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNK 325 (470)
Q Consensus 247 ~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G-~~~~~~~~~~~l~~ 325 (470)
+++++|+++|+++ +++||+||+|........ ......+....+.+ +.||||.++++ +| |+++++++++.+.+
T Consensus 147 ~~l~~i~~~~~~~-~~~lvvDEA~~~~~~~~~-~~~~~~~~~~~~~~--~~s~SK~~~~~---~G~~~~~~~~~i~~~~~ 219 (333)
T PRK10534 147 EYLKQAWEFTRER-NLALHVDGARIFNAVVAY-GCELKEITQYCDSF--TICLSKGLGTP---VGSLLVGNRDYIKRARR 219 (333)
T ss_pred HHHHHHHHHHHHc-CCeEEeeHHHHHHHHHHc-CCCHHHHHhcCCEE--EEEeEcCCCCc---ccceEEcCHHHHHHHHH
Confidence 9999999999999 999999999863211000 11122222111323 34899998753 68 68899999999988
Q ss_pred HhhhccCCC--ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcc
Q 012124 326 IQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 403 (470)
Q Consensus 326 ~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 403 (470)
++..+..+. +.+.|.++...|++ ..+.+.+ ..+.++++.+.|+++ |+.+.+| .++|+|++++..
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~~l~~------~~~~~~~-~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~~~~----- 285 (333)
T PRK10534 220 WRKMTGGGMRQAGILAAAGLYALKH------NVARLQE-DHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRVGEE----- 285 (333)
T ss_pred HHHHhCCchhhHHHHHHHHHHHHHh------hHHHHHH-HHHHHHHHHHHHHhC-CCccCCC-CceEEEEECCch-----
Confidence 776554332 33556666665542 1222333 344678899999988 8888776 477799998742
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 012124 404 EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 404 ~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~l~ 462 (470)
+..++.+.|.+ .||.+.||. ++|++.+ .+.+++++++++|++++.
T Consensus 286 -------~~~~~~~~l~~-~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 -------QAAALGEYMRE-RNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred -------hHHHHHHHHHH-cCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 45677766654 599999873 5788776 389999999999998764
No 124
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=1.2e-30 Score=263.92 Aligned_cols=333 Identities=18% Similarity=0.177 Sum_probs=236.8
Q ss_pred CCCeEEccCCC-CCCC-----ChHHHHHHHHHHHHc---CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 93 GVSVIRLAAGE-PDFD-----TPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 93 ~~~~i~l~~g~-~~~~-----~~~~~~~a~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
+++.++|++.+ ..+. +++.+.+++.+.-.. ....|+...+..+|++.+|++++ .++.|++++|.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G~ 171 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMGY 171 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCHH
Confidence 45778888876 3333 234555555554221 12347778888999999999974 35678887776
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-------CC-----ceEE
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-------EK-----SRLL 231 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-------~~-----~~~i 231 (470)
...+ .++.+++++||.|++++|+|+++...++..|++++.++.+ |++.+++.++ ++ .+++
T Consensus 172 ~an~-~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~l 243 (489)
T PLN02483 172 ATNS-TIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKII 243 (489)
T ss_pred HHHH-HHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEE
Confidence 5544 6778889999999999999999999999999999999863 4455544432 22 2556
Q ss_pred EEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCC--CCcccccccCCCCCceEEEeccCcccccccc
Q 012124 232 ILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 232 ~l~~p-~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~--~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
+++.+ .|++|...+ +++|+++|++| +++||+||+|+...++. ........++. .+++|+++||||++|++|
T Consensus 244 ivve~v~s~~G~~~~---l~~I~~la~~~-~~~livDEa~s~g~~G~~G~g~~~~~~v~~-~~~dI~~~SfSKs~g~~G- 317 (489)
T PLN02483 244 VIVEGIYSMEGELCK---LPEIVAVCKKY-KAYVYLDEAHSIGAVGKTGRGVCELLGVDP-ADVDIMMGTFTKSFGSCG- 317 (489)
T ss_pred EEECCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECcCccCccCCCCCchHHhcCCCc-ccCcEEEEecchhcccCc-
Confidence 55554 689999988 88999999999 99999999998543322 12223333333 467899999999998776
Q ss_pred eeeEEEcCHHHHHHHHHHhhhc--c-CCCChHHHHHHHHHHh---cCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee
Q 012124 309 RLGYIAGPKHFVAACNKIQSQF--T-SGASSISQKAGVAALG---LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 382 (470)
Q Consensus 309 r~G~~~~~~~~~~~l~~~~~~~--~-~~~~~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 382 (470)
||+++++++++.+....... . ..++...|. +.+.|+ ... ..++..+.++.++++++++.+.|+++ |+.+
T Consensus 318 --G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~-~~aaL~~l~~~~-g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v 392 (489)
T PLN02483 318 --GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQ-VISAIKVILGED-GTNRGAQKLAQIRENSNFFRSELQKM-GFEV 392 (489)
T ss_pred --eEEEcCHHHHHHHHHhCccccccCCcCHHHHHH-HHHHHHHHHhCc-cccchHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 99999999999988764322 2 223334443 444442 111 12345566788999999999999998 8877
Q ss_pred cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-C---CCcEEEEeec--CHHHHHHHHHH
Q 012124 383 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-D---DTCIRISYAA--SLTTLQAAVER 456 (470)
Q Consensus 383 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~-~---~~~iRls~~~--~~~~i~~~l~~ 456 (470)
..+.++..+|+.+.... +..++++.|+++ ||.+.| ..|. . .+++|++++. ++++|++++++
T Consensus 393 ~~~~~sp~~~l~l~~~~-----------~~~~~~~~Ll~~-GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~ 459 (489)
T PLN02483 393 LGDNDSPVMPIMLYNPA-----------KIPAFSRECLKQ-NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEV 459 (489)
T ss_pred cCCCCCCEEEEEECCHH-----------HHHHHHHHHHHC-CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 66666666666654321 456788888876 999997 4442 2 3689999885 99999999999
Q ss_pred HHHHHHhh
Q 012124 457 IKKGLLTL 464 (470)
Q Consensus 457 l~~~l~~~ 464 (470)
|+++++.+
T Consensus 460 L~~~~~~~ 467 (489)
T PLN02483 460 ISEVGDLV 467 (489)
T ss_pred HHHHHHHh
Confidence 99998764
No 125
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=3.7e-30 Score=257.42 Aligned_cols=332 Identities=17% Similarity=0.179 Sum_probs=237.3
Q ss_pred CCCeEEccCCC-CCCCChHHHHHHHHHHHHcCC-------CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 93 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 93 ~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~-------~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
|++.++|++++ .++.+++.+++++.+++.... ..|+......+|++.+++++ | .++.|++++|+
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g---~~~~i~~~sG~- 116 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----G---KESALLFTSGY- 116 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----C---CCCEEEECcHH-
Confidence 45678888775 566678999999999886522 12322223456777777765 4 24677777775
Q ss_pred HHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhc----cCCceEEEEcCCCC
Q 012124 165 QSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL----TEKSRLLILCSPSN 238 (470)
Q Consensus 165 ~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l----~~~~~~i~l~~p~n 238 (470)
+++..++..+. .+||.|+++...|..+...++..|+++..++. + |.+.+++.+ .+++++|++++|+|
T Consensus 117 ~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~~~n 189 (410)
T PRK13392 117 VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFESVYS 189 (410)
T ss_pred HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeCCCC
Confidence 56666666664 48998888877787777788889998877653 2 344444433 35789999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCc-eEEEeccCcccccccceeeEEEcCH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
|||.+++ +++|.++|+++ ++++|+||+|....++... ..+....+..++ .++++||||.+|++| ||+++++
T Consensus 190 ~tG~~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~g-~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~ 261 (410)
T PRK13392 190 MDGDIAP---IEAICDLADRY-NALTYVDEVHAVGLYGARG-GGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA 261 (410)
T ss_pred CCccccc---HHHHHHHHHHc-CCEEEEECCccccCcCCCC-CchhhhccCCCCCcEEEEEChHhhhccc---chhhcCH
Confidence 9999999 88889999999 9999999999954443221 112121111123 388999999999888 9999999
Q ss_pred HHHHHHHHHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeec
Q 012124 318 HFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 395 (470)
Q Consensus 318 ~~~~~l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~ 395 (470)
++++.+.+....+ +.+.+++.+.++.++|+. .+.....++.++++++++.+.|+++ |+++.++.++++ .+.+
T Consensus 262 ~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-~i~~ 335 (410)
T PRK13392 262 DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRH----LKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHIV-PVMV 335 (410)
T ss_pred HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEE-EEEe
Confidence 9999888766432 444566778888888875 2223455677889999999999887 888776777764 3334
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
+... +..+++++|++++||.+.++..... ..++|++++. ++++++.+++.|+++++++
T Consensus 336 ~~~~-----------~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 336 GDPT-----------LCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCHH-----------HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 3210 3567888887666999998654332 3689999974 9999999999999998764
No 126
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.98 E-value=6.1e-30 Score=254.25 Aligned_cols=337 Identities=15% Similarity=0.190 Sum_probs=240.1
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+.+|.. .+.. ++.+.+++.+++.+... .+. ....+....+++.+.+.. ..+++++++|+++|+.
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~ 102 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH-VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEAVE 102 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCc-ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHH
Confidence 5677899988742 2333 78999999999875221 111 122345556666665432 2469999999999999
Q ss_pred HHHHHh----cCCCC----eEEEcCCCCCChHHHHHHcCCEEEEecCc-C-CCCCc----cCHHhHhhhccCCceEEEEc
Q 012124 169 QAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADATPVILPTR-I-SENFL----LDPKVLESKLTEKSRLLILC 234 (470)
Q Consensus 169 ~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~----~d~~~l~~~l~~~~~~i~l~ 234 (470)
.+++.+ ..+|| +|++.+++|+++.......+......+.. + ..++. .|++.+++.+++++++|+++
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avive 182 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIE 182 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEe
Confidence 998876 45676 89999999999887666554432222110 0 11121 58999999998889999998
Q ss_pred CCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCcccccccceeeE
Q 012124 235 SPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312 (470)
Q Consensus 235 ~p~nPtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~ 312 (470)
.++||+| .++|.+.+++|.++|++| |+++|+||+|.++.+.+.... ....+.+ + +.||||.++ +|+|+||
T Consensus 183 p~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~~~~~~~~~p--d----i~t~sK~l~-~G~~ig~ 254 (389)
T PRK01278 183 PIQGEGGIRPAPDEFLKGLRQLCDEN-GLLLIFDEVQCGMGRTGKLFAHEWAGVTP--D----IMAVAKGIG-GGFPLGA 254 (389)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCcceeecccCCCC--C----EEEEehhcc-CCcceEE
Confidence 7899999 789999999999999999 999999999998755443111 1112222 1 468999998 9999999
Q ss_pred EEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHHHHHHHhccCCCC-eecCCCceE
Q 012124 313 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGELEGV-KMSEPQGAF 389 (470)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~g~ 389 (470)
+++++++++.+.......+++.+++.|.++.+.|+.-.. ..++++++.+.++++.+.+.+ +.+++ .... ..|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~~~~v~-g~G~ 330 (389)
T PRK01278 255 CLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVD---RFPDVIEEVR-GKGL 330 (389)
T ss_pred EEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh---hCCCceeeEe-cccE
Confidence 999999988887666667788999999999877763110 123445555555555554432 23322 2223 3577
Q ss_pred EEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012124 390 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
++|++++. +..+++++|+++ ||.+.|+. .+++||+++ .+++++++++++|+++++++
T Consensus 331 ~~~i~~~~-------------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 331 LLGLKCVV-------------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred EEEEEEec-------------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 78888753 567899998877 99999974 578999965 48999999999999998753
No 127
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.98 E-value=1.1e-29 Score=249.10 Aligned_cols=330 Identities=19% Similarity=0.204 Sum_probs=236.0
Q ss_pred CeEEccCCC-CCCCChHHHHHHHHHHHHcCCCC---CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 95 SVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 95 ~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~---y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
.+++|+.++ ...+.++++.+++++.+.+...+ |....|..++++.+.+.+.+.+|. ++ +++++++++++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~-~iv~~sg~~a~~~~ 77 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK---EA-ALVFSSGYAANDGV 77 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC---CC-EEEeccHHHHHHHH
Confidence 356777665 34444789999999999753222 222235555555555555555553 23 45555556788878
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-----CceEEEEcCCCCCcccCCC
Q 012124 171 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 171 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~i~l~~p~nPtG~~~s 245 (470)
+.+++++||.|++++|.|+++...++..|++++.++. +|++.+++.+++ +++++++++++||||...+
T Consensus 78 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 78 LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 8888899999999999999998888999999988763 477788887753 4677778899999999988
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHH
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 324 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~ 324 (470)
+++|+++|+++ ++++|+|++|+...+..... ......+ ..+.+++++|+||.++.+| ||+++++++++.+.
T Consensus 151 ---~~~i~~~~~~~-~~~livD~a~~~g~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~ 222 (349)
T cd06454 151 ---LPELVDLAKKY-GAILFVDEAHSVGVYGPHGRGVEEFGGL-TDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLR 222 (349)
T ss_pred ---HHHHHHHHHHc-CCEEEEEccccccccCCCCCChhhhccc-cccCcEEEeechhhhcccC---CEEECCHHHHHHHH
Confidence 78899999999 99999999997533321111 1111112 2467899999999998544 99999999888876
Q ss_pred HHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCc
Q 012124 325 KIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 402 (470)
Q Consensus 325 ~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 402 (470)
.....+ ....++..+.++.+.++.- .+ .+..+++++++++.+.+.|.++ |+.+..+.++++.++.+++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~~--- 294 (349)
T cd06454 223 SYARGFIFSTSLPPAVAAAALAALEVL---QG-GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDPA--- 294 (349)
T ss_pred HhchhhhccCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCChH---
Confidence 644322 2245666666777777641 22 4567788899999999999887 777665555665555554221
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC---CCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 403 AEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 403 ~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~---~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
+..++.+.|.++ ||.+.++.... ..+++|++++. +++++++++++|+++
T Consensus 295 --------~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 295 --------KAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred --------HHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 567888888877 99998863221 14689999985 899999999999764
No 128
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.98 E-value=6.5e-30 Score=253.63 Aligned_cols=333 Identities=15% Similarity=0.173 Sum_probs=235.8
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+|||.+|.+ .+.. ++.+.+++.+++.+.... ......+.++.+++.+.+.+|. +++++++|+++++.
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~la~~~g~----~~~~~~~sg~~a~~ 98 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV--SNLYYTEPQEELAEKLVEHSGA----DRVFFCNSGAEANE 98 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccc--ccccCCHHHHHHHHHHHhhCCC----CEEEEeCCcHHHHH
Confidence 5677899999742 2333 588999999888753211 1111235566666666665553 49999999999999
Q ss_pred HHHHHhc---C----CCCeEEEcCCCCCChHHHHHHcCCEEEE----ecCcCCCCCcc--CHHhHhhhccCCceEEEEcC
Q 012124 169 QAVLAVC---S----PGDEVIIPAPFWVSYPEMARIADATPVI----LPTRISENFLL--DPKVLESKLTEKSRLLILCS 235 (470)
Q Consensus 169 ~~~~~l~---~----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~~--d~~~l~~~l~~~~~~i~l~~ 235 (470)
.+++.+. . +||+|++.+|+|+++...+...+..... .++..+..+.. |++.+++.+++++++|+++.
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p 178 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEP 178 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEc
Confidence 9888652 2 3799999999999988776665554321 23322211111 89999999988899998876
Q ss_pred CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEE
Q 012124 236 PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 314 (470)
Q Consensus 236 p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~ 314 (470)
++||+|. .++.+++++|.++|+++ +++||+||+|.++.+.+.. .++.... .... +.||||.++ +|+|+||++
T Consensus 179 ~~~~~g~~~~~~~~l~~i~~l~~~~-~~~~i~De~~~~~~~~g~~-~~~~~~~-~~~d---~~t~sK~~~-~G~riG~~~ 251 (379)
T TIGR00707 179 IQGEGGVNPASAEFLKALREICKDK-DALLIFDEVQTGIGRTGKF-FAYEHYG-IEPD---IITLAKGLG-GGVPIGATL 251 (379)
T ss_pred cccCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchh-hhHHhcC-CCCC---EEEEccccc-CCcccEEEE
Confidence 6778886 47999999999999999 9999999999987654421 1211111 1122 237899998 999999999
Q ss_pred cCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC---CCCeecCCCceEEE
Q 012124 315 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYL 391 (470)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~ 391 (470)
+++++++.+........++.+++.|.++.++|+.- + ..+.++.++++++.+.+.|+++ .++... +..|.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~---~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~g~~~ 325 (379)
T TIGR00707 252 AKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVI---E--KERLLENVKEKGDYFKERLEELGKNYPNKEV-RGKGLML 325 (379)
T ss_pred EcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---H--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcc-ccCceEE
Confidence 99999998876555556778999999999888631 1 1235556666667676666553 122111 2357778
Q ss_pred eeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 392 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
|+++++ +..++.+.|.++ ||.+.|+. .+++|++++. +++++++++++|++++
T Consensus 326 ~~~~~~-------------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 326 GIELEA-------------PCKDIVKKALEK-GLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EEEecC-------------cHHHHHHHHHHC-CcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 888864 467888887655 99999853 4789999754 8999999999998753
No 129
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.98 E-value=3.3e-30 Score=238.20 Aligned_cols=316 Identities=19% Similarity=0.253 Sum_probs=216.1
Q ss_pred CCCC-CCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH-HH-HHHHhc------------CCCCeEEEcCCCC
Q 012124 124 FTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI-LQ-AVLAVC------------SPGDEVIIPAPFW 188 (470)
Q Consensus 124 ~~~y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al-~~-~~~~l~------------~~gd~Vlv~~p~y 188 (470)
..+| +...|++++|+-.++.+. ++++||++..+++-.+ .. +..+++ .+.-+.+++.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELLG------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHhC------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 5789 899999999999999984 6889999976665333 22 222221 1123679999999
Q ss_pred CChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhc--cCCceEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 012124 189 VSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 265 (470)
Q Consensus 189 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l--~~~~~~i~-l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI 265 (470)
..+..+.+.+|.+.++||+.+++ +|+|.+++++ ++.+|.|+ ++..+||||+++|.|..++|+++-.+.+|+.|+
T Consensus 135 DRHFai~E~~Giemi~VpM~~dG---PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTEDG---PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETTE---E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred hHHHHHHHhhCcEEEecCCCCCC---CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 99999999999999999998655 8999999998 45788887 577799999999999999999984333499999
Q ss_pred Eecccccccc-CCCCcc---cccc---cCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHH
Q 012124 266 SDEIYEHIIY-APATHT---SFAS---LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSIS 338 (470)
Q Consensus 266 ~Dd~~~~~~~-~~~~~~---~~~~---~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (470)
.|++|....+ +..... .+.. -.+..++++.+.|+||.. +||.+++++.++.+-++.+.+.....+.++..+.
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvN 290 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVN 290 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHH
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHH
Confidence 9999997555 222222 2222 234578999999999998 7999999999999999999999888999999999
Q ss_pred HHHHHHHHhcCC-CChHHHHHHHHHHHHHHHHHHHHhcc-CC---C-CeecCCCceEEEeeeccCccCCcccCCCCCCCH
Q 012124 339 QKAGVAALGLGY-AGGEVVSKMVKAFRERRDFLVKSFGE-LE---G-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 412 (470)
Q Consensus 339 q~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~-~~---g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (470)
|..-..++.+.. -...|+++.++.++-+.+.+.+.|.+ +. | .+|..|.||||++++..+. .+
T Consensus 291 QLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------------~A 358 (425)
T PF12897_consen 291 QLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------------TA 358 (425)
T ss_dssp HHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-------------H
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC------------hH
Confidence 999999998722 12578888888888888888888765 43 3 4899999999999999875 67
Q ss_pred HHHHHHHHHcCCEEEEC-CCCCC-----CCCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 012124 413 ESLCRYLLDKAQVALVP-GDAFG-----DDTCIRISYAA-SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 413 ~~l~~~L~~~~gI~v~p-g~~f~-----~~~~iRls~~~-~~~~i~~~l~~l~~~l~ 462 (470)
..+++ |+++.||.++| |..|- .+..|||+.+. +.++++.+++.+..+++
T Consensus 359 krvV~-lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 359 KRVVE-LAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHH-HHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 77776 56677999999 66662 14689999998 88999999999988765
No 130
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=1.7e-30 Score=225.89 Aligned_cols=331 Identities=23% Similarity=0.296 Sum_probs=251.1
Q ss_pred hcCCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 91 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
+-|+.++.+..++....++|+-.+ --..|+. .-..+++.++++- -+..+|+|++.-|+.+.|+++
T Consensus 38 a~G~~iv~ld~~e~~ryPdP~q~e--------fk~~~~d-~rnk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~i 102 (375)
T KOG0633|consen 38 ALGRDIVKLDANENPRYPDPEQME--------FKYVYPD-PRNKRLSDALAQD------KPLTSDNICVGVGSDELIDLI 102 (375)
T ss_pred hcCCCceEeccccCCCCcCHHHcc--------cccccCC-cccchhhhhcccC------CCCCccceEEecCcHHHHHHH
Confidence 356778888887766555443211 1233422 2334566655542 347889999999999999999
Q ss_pred HHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc--CCceEEEEcCCCCCcccCCCHH
Q 012124 171 VLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKN 247 (470)
Q Consensus 171 ~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~--~~~~~i~l~~p~nPtG~~~s~~ 247 (470)
+++.+.|| ++|++..|+|..|.--+...+++++.+|.++ +|.++.|.+.+.+. +.+|++|+++|+||||..+..+
T Consensus 103 iR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~ 180 (375)
T KOG0633|consen 103 IRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKED 180 (375)
T ss_pred HhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHH
Confidence 99999999 9999999999999888888999999999975 57799999999884 4799999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh
Q 012124 248 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 327 (470)
Q Consensus 248 ~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~ 327 (470)
++.+|++.-. |.+|++||+|-+|.-.+.. ..+...+.+.+++.+|||+||++|+|+||-.++.++++.+.+.+
T Consensus 181 di~KiLe~p~---nglVVvDEAYidFsg~~S~----~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K 253 (375)
T KOG0633|consen 181 DILKILEMPD---NGLVVVDEAYIDFSGVESR----MKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK 253 (375)
T ss_pred HHHHHHhCCC---CcEEEEeeeeEeecccccc----chHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc
Confidence 9999987432 6788899999997643322 22333468899999999999999999999999999999999998
Q ss_pred hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCccCCcccCC
Q 012124 328 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGF 406 (470)
Q Consensus 328 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 406 (470)
.+++ .|..+..++.+++.+.. -..++..++.+-+.|.++.+.|.+++++. +..+....|+.+++.+.-
T Consensus 254 aPYN--iS~~~s~~AL~Als~~n--~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~------- 322 (375)
T KOG0633|consen 254 APYN--ISVAGSVAALAALSDSN--GKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD------- 322 (375)
T ss_pred CCcc--ccchhHHHHHHhcCccc--chHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC-------
Confidence 8766 67777788888887432 35677888888888999999999987764 444455566888886531
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEC-CCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012124 407 GKIENSESLCRYLLDKAQVALVP-GDAFGDDTCIRISYAASLTTLQAAVERIKK 459 (470)
Q Consensus 407 ~~~~~~~~l~~~L~~~~gI~v~p-g~~f~~~~~iRls~~~~~~~i~~~l~~l~~ 459 (470)
..-+..+..+++.+.||.|+- |+.-+..|++|++++..++. .-.++.|++
T Consensus 323 --n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~ 373 (375)
T KOG0633|consen 323 --NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQ 373 (375)
T ss_pred --cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHh
Confidence 012455666677788998863 55555689999999985432 333444443
No 131
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.98 E-value=5.2e-30 Score=255.64 Aligned_cols=331 Identities=14% Similarity=0.099 Sum_probs=239.4
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+|+.++||.+|.+ .+.. ++.+.+++.+++.+. ...|.++. ...+++++.+..|. ..++++++++|+++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~-----~~~la~~l~~~~~~-~~~~~v~~~~sgse 114 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEP-----QIALAERLVELLGA-PEGGRVFFCNSGAE 114 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHH-----HHHHHHHHHHhCCC-CCCCEEEEeCchHH
Confidence 5778999998753 3444 689999999988752 13353322 24555566555553 24579999999999
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHH-cCC------------EEEEecCcCCCCCccCHHhHhhhccCCceEE
Q 012124 166 SILQAVLAVCSPG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISENFLLDPKVLESKLTEKSRLL 231 (470)
Q Consensus 166 al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i 231 (470)
++..+++.+..+| +.|+..+++|+++...... .|. ++..+|. .|++.+++.+++++++|
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~av 187 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTAAV 187 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeEEE
Confidence 9999999776676 5677777899988644332 222 2222222 37899999987788999
Q ss_pred EEcCCCCCcccCCCHHH-HHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEeccCcccccccce
Q 012124 232 ILCSPSNPTGSVYPKNL-LDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWR 309 (470)
Q Consensus 232 ~l~~p~nPtG~~~s~~~-~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~sK~~~~~G~r 309 (470)
++..++||||..++.++ +++|.++|++| |+++|+||+|.+|.+.+... .....+.+ + +.+|||.++ +|+|
T Consensus 188 iiep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~~~~~~~~~p--D----i~t~sK~l~-~G~~ 259 (398)
T PRK03244 188 FLEPIQGEAGVVPPPAGYLAAAREITDRH-GALLVLDEVQTGIGRTGAWFAHQHDGVTP--D----VVTLAKGLG-GGLP 259 (398)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCcccchHHhhhhhCCCC--C----EEEEchhhh-CCcc
Confidence 99888999999987655 99999999999 99999999998865544211 01112222 2 448899998 9999
Q ss_pred eeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee--cCCCc
Q 012124 310 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM--SEPQG 387 (470)
Q Consensus 310 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~ 387 (470)
+||+++++++++.+.......+++.+++.|.++.++|+.- . ..+..++++++.+.+.+.|+++ +..+ .....
T Consensus 260 ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~---~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~ 333 (398)
T PRK03244 260 IGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTI---A--SEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGR 333 (398)
T ss_pred cEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHHHHHHHhc-CCCceeeEeec
Confidence 9999999999888766555567789999999999998631 1 1234455666677788888775 3211 11236
Q ss_pred eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 388 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
|+++|+.++.. ....+.++|.++ ||.+.+.. .+.+|++++. +++++++++++|++++++++
T Consensus 334 g~~~~i~~~~~------------~~~~~~~~l~~~-Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 334 GLLLGIVLTAP------------VAKAVEAAAREA-GFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred cEEEEEEEecc------------HHHHHHHHHHHC-CeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 78899998642 456788888765 99998742 4789999775 89999999999999998765
Q ss_pred C
Q 012124 466 P 466 (470)
Q Consensus 466 ~ 466 (470)
.
T Consensus 397 ~ 397 (398)
T PRK03244 397 A 397 (398)
T ss_pred c
Confidence 4
No 132
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=3.4e-29 Score=250.46 Aligned_cols=334 Identities=19% Similarity=0.236 Sum_probs=243.6
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcCCCC-----CCC----CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR-----YTP----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~-----y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
|++++.|..+... ++|+.+.+++.+.+...... +.. .....++|+.+++++ |.+ ++++|++|+|+
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~-~~~~v~~~~g~ 89 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAA-SDEEIVFTRGT 89 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCCH
Confidence 4567888888877 45777888888776542111 100 123457778888776 432 36799999999
Q ss_pred HHHHHHHHHHh----cCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcC
Q 012124 164 KQSILQAVLAV----CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 235 (470)
Q Consensus 164 ~~al~~~~~~l----~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~ 235 (470)
++++.+++.++ +++||+|++.++.|++.. ...+..|++++.++.+. ++.+|++.+++.++++++++++++
T Consensus 90 t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~lv~~~~ 167 (403)
T TIGR01979 90 TESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDD--DGTLDLDDLEKLLTEKTKLVAITH 167 (403)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC--CCCCCHHHHHHHhccCCeEEEEEc
Confidence 99999988875 578999999999887643 45567899999999873 345899999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEc
Q 012124 236 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 236 p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
++||||..++ +++|.++|+++ |+++|+|++|+... ....+.. .+..+++.|++|.+|.+| +||+++
T Consensus 168 ~~~~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~g~----~~~~~~~----~~~d~~~~s~~K~~gp~G--~g~l~~ 233 (403)
T TIGR01979 168 VSNVLGTVNP---VEEIAKLAHQV-GAKVLVDGAQAVPH----MPVDVQA----LDCDFYVFSGHKMYGPTG--IGVLYG 233 (403)
T ss_pred ccccccccCC---HHHHHHHHHHc-CCEEEEEchhhcCc----cccCccc----cCCCEEEEecccccCCCC--ceEEEE
Confidence 9999999999 78899999999 99999999997521 1122221 245699999999888555 899999
Q ss_pred CHHHHHHHHHHh---------------------hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 012124 316 PKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 374 (470)
Q Consensus 316 ~~~~~~~l~~~~---------------------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 374 (470)
++++++.+.... ......++.....++.++++.- .+...++++++..+.++.+.+.|
T Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~--~~~g~~~~~~~~~~l~~~l~~~l 311 (403)
T TIGR01979 234 KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYL--EAIGLENIEAHEHELTAYALERL 311 (403)
T ss_pred chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHH
Confidence 988777653110 0111234455555556655431 01125677788888899999999
Q ss_pred ccCCCCeecCCC-----ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC--------CCCCCcEEE
Q 012124 375 GELEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA--------FGDDTCIRI 441 (470)
Q Consensus 375 ~~~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~--------f~~~~~iRl 441 (470)
++++|+++..|. +++ +.+.+++. +..++.+.|. +.||.+.+|.. ++.++++|+
T Consensus 312 ~~~~g~~~~~~~~~~~~~~~-v~~~~~~~------------~~~~~~~~L~-~~gI~v~~g~~~~~~~~~~~~~~~~iRi 377 (403)
T TIGR01979 312 GEIPGLRIYGPRDAEDRGGI-ISFNVEGV------------HPHDVGTILD-EEGIAVRSGHHCAQPLMRRFGVPATCRA 377 (403)
T ss_pred hcCCCEEEeCCCCccccCce-EEEEeCCc------------CHHHHHHHHh-hCCEEEcchhhhhHHHHHHhCCCCEEEE
Confidence 888888887554 455 44566643 5667777665 55999998763 344679999
Q ss_pred Eeec--CHHHHHHHHHHHHHHHHhh
Q 012124 442 SYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 442 s~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
|++. +++|++.+++.|+++++.+
T Consensus 378 S~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 378 SFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EeccCCCHHHHHHHHHHHHHHHHHh
Confidence 9986 8899999999999887754
No 133
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=3.1e-29 Score=251.92 Aligned_cols=335 Identities=19% Similarity=0.230 Sum_probs=243.0
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCC------CCC---CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR------YTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~------y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
++++.|..+... ++|+.+++++.+.+.+.... |.. .....++|+.+++++ |.. ++++|++|+|++
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t 104 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NAS-TSREIVFTRNAT 104 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCC-CCCEEEEeCCHH
Confidence 457888888876 46788889988877542111 100 112357777777775 431 357999999999
Q ss_pred HHHHHHHHHh----cCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCC
Q 012124 165 QSILQAVLAV----CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 236 (470)
Q Consensus 165 ~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p 236 (470)
+++..+++.+ +++||+|++.++.|++. ...++..|++++.++++.++ .+|++.+++.+++++++|+++++
T Consensus 105 ~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~--~~~~~~l~~~i~~~t~lv~i~~~ 182 (424)
T PLN02855 105 EAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDE--VLDVEQLKELLSEKTKLVATHHV 182 (424)
T ss_pred HHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCC--CcCHHHHHHHhccCceEEEEeCc
Confidence 9999998763 58999999999988753 34556789999999986543 48999999999889999999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC
Q 012124 237 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 316 (470)
Q Consensus 237 ~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~ 316 (470)
+||||..+| +++|+++|+++ |++||+|++|+. +.....+.. .+..+++.|++|.+|.+| +||++++
T Consensus 183 ~n~tG~~~~---~~~I~~l~~~~-g~~vivD~a~~~----g~~~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~ 248 (424)
T PLN02855 183 SNVLGSILP---VEDIVHWAHAV-GAKVLVDACQSV----PHMPVDVQT----LGADFLVASSHKMCGPTG--IGFLWGK 248 (424)
T ss_pred cccccccCC---HHHHHHHHHHc-CCEEEEEhhhhc----CCcCCCchh----cCCCEEEeecccccCCCc--cEEEEEc
Confidence 999999999 77889999999 999999999963 221222222 234588999999877444 8999999
Q ss_pred HHHHHHHHHHh--------------------hhccCC-CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012124 317 KHFVAACNKIQ--------------------SQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 375 (470)
Q Consensus 317 ~~~~~~l~~~~--------------------~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 375 (470)
+++++.+.... ..+..+ ++.....++.++++.- .+...++++++.++.++.+.+.|+
T Consensus 249 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~L~ 326 (424)
T PLN02855 249 SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYL--SEIGMDRIHEYEVELGTYLYEKLS 326 (424)
T ss_pred hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHh
Confidence 88877653220 001122 3333344444455421 123467788888889999999998
Q ss_pred cCCCCeecCCC-------ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEE
Q 012124 376 ELEGVKMSEPQ-------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIR 440 (470)
Q Consensus 376 ~~~g~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f--------~~~~~iR 440 (470)
+++|+++..+. +++ +.+.+++. +..++.+.|.+++||.+..|..+ +.++++|
T Consensus 327 ~~~g~~i~~~~~~~~~~r~~~-v~~~~~~~------------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iR 393 (424)
T PLN02855 327 SVPGVRIYGPKPSEGVGRAAL-CAFNVEGI------------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASAR 393 (424)
T ss_pred cCCCEEEeCCCcccccCcccE-EEEEECCc------------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEE
Confidence 88888877432 244 55677643 56788888876669999988743 2346899
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 441 ISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 441 ls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+|++. +++|++.+++.|+++++.++
T Consensus 394 iS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 394 ASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred EEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99986 89999999999999987653
No 134
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=2.1e-29 Score=248.36 Aligned_cols=297 Identities=13% Similarity=0.156 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCC
Q 012124 134 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 213 (470)
Q Consensus 134 ~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 213 (470)
.++++.+++++ |. +.+++++|+++++..++.+++++||.|+++.+.|.+....++..|++++.++.+.++++
T Consensus 54 ~~~~e~lA~~~----g~----~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 54 HDFLEDLAEFL----GM----DEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred HHHHHHHHHHh----CC----CceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccC
Confidence 45666666664 43 46778999999999999999999999999999977777778999999999998755567
Q ss_pred ccCHHhHhhhccC-------CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc
Q 012124 214 LLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 286 (470)
Q Consensus 214 ~~d~~~l~~~l~~-------~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~ 286 (470)
.+|++.|++.+++ ++++|++++|+||||...+ +++|+++|+++ |+++|+|++|+.... ......
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~-~~~livDea~~~g~~----~~~~~~- 196 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREK-GVPLLLNCAYTVGRM----PVSAKE- 196 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHc-CCeEEEECccccCCc----CCCHHH-
Confidence 8999999999852 6789999999999999888 88889999999 999999999986321 111111
Q ss_pred CCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC--------CChHHHHHHHHHHhcCCCChHHHHH
Q 012124 287 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG--------ASSISQKAGVAALGLGYAGGEVVSK 358 (470)
Q Consensus 287 ~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~--------~~~~~q~a~~~~l~~~~~~~~~~~~ 358 (470)
.+..++++||||.++ +|.|+||+++++++++.+......+... .....+.++..++.. ..+++++
T Consensus 197 ---~~~di~v~s~sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~l~~ 269 (370)
T TIGR02539 197 ---IGADFIVGSGHKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH---VVERVKR 269 (370)
T ss_pred ---cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH---HHHHHHH
Confidence 234578899999998 6778999999999999988766543321 111244444555542 1345555
Q ss_pred HHHHHHHHHHHHHHHhccCCCCeec--CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEE-EECCCCCCC
Q 012124 359 MVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA-LVPGDAFGD 435 (470)
Q Consensus 359 ~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~-v~pg~~f~~ 435 (470)
..+.++. ++++.+.|+++ |+++. .+....|+++++|.... ... +...+...+.+.|.++ ||. +.+ +.
T Consensus 270 ~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~-~~~--~~~~~~~~~~~~L~e~-GI~~ir~----~~ 339 (370)
T TIGR02539 270 WDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE-IAQ--KHKRRGYFLYEELKKR-GIHGIRS----GQ 339 (370)
T ss_pred HHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH-Hhh--hhccccHHHHHHHHhC-CCccccC----Cc
Confidence 5555555 45899999988 77753 34456667788763100 000 0001345678888766 896 554 33
Q ss_pred CCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012124 436 DTCIRISYAA-SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 436 ~~~iRls~~~-~~~~i~~~l~~l~~~l~~~ 464 (470)
++++|+++.. ++++++++++.|+++++++
T Consensus 340 ~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 340 TKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 5699999744 9999999999999988753
No 135
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=7.6e-29 Score=247.80 Aligned_cols=330 Identities=15% Similarity=0.164 Sum_probs=239.4
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcCCCCC-C-CC-------cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRY-T-PN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y-~-~~-------~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+++.|..+.-. ++|+.+++++.+.+....... . .. .-..++|+.+++++ |. .++++|++|+|+++
T Consensus 23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~-~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NA-RSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----Cc-CCCCeEEEeCCHHH
Confidence 45777766644 356778888888776422111 0 10 11346667777665 42 15689999999999
Q ss_pred HHHHHHHH----hcCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCC
Q 012124 166 SILQAVLA----VCSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 237 (470)
Q Consensus 166 al~~~~~~----l~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~ 237 (470)
++..++.+ ++++||+|++.++.|++. ...++..|++++.++++.+ +.+|++.|+++++++++++++++++
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~t~lv~l~~~~ 174 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPALFDERTRLLAITHVS 174 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC--CCCCHHHHHHhcCCCcEEEEEecch
Confidence 99999886 468999999999988753 4455678999999998643 4589999999999899999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
||||..+| +++|+++|+++ |+++|+|++|+... ...++.. .+..+++.|++|.+|.+| +||+++++
T Consensus 175 n~tG~~~~---~~~i~~~~~~~-~~~vivD~a~~~g~----~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~ 240 (406)
T PRK09295 175 NVLGTENP---LAEMIALAHQH-GAKVLVDGAQAVMH----HPVDVQA----LDCDFYVFSGHKLYGPTG--IGILYVKE 240 (406)
T ss_pred hcccccCC---HHHHHHHHHHc-CCEEEEEcccccCc----cccCchh----cCCCEEEeehhhccCCCC--cEEEEEch
Confidence 99999999 78899999999 99999999997532 1222222 244589999999888555 89999998
Q ss_pred HHHHHHHHH----------------------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012124 318 HFVAACNKI----------------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 375 (470)
Q Consensus 318 ~~~~~l~~~----------------------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 375 (470)
++++.+... .+....+++.....++.++++.- .+...++++++.++.++++.+.|.
T Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~l~ 318 (406)
T PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYV--SALGLNNIAEYEQNLMHYALSQLE 318 (406)
T ss_pred HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHh
Confidence 887654311 11122245666666667776541 022356777888888999999998
Q ss_pred cCCCCeecCCC--ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------CCCcEEEEeec
Q 012124 376 ELEGVKMSEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--------DDTCIRISYAA 445 (470)
Q Consensus 376 ~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--------~~~~iRls~~~ 445 (470)
+++|+++..+. .++ +.+.+++. +..++.+.| +++||.+..|..+. .++++|+|++.
T Consensus 319 ~~~~~~~~~~~~~~~i-v~~~~~~~------------~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ 384 (406)
T PRK09295 319 SVPDLTLYGPQNRLGV-IAFNLGKH------------HAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAM 384 (406)
T ss_pred cCCCEEEeCCCCCceE-EEEEECCc------------CHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccC
Confidence 88888876653 455 44456543 567777766 55699999987442 34689999997
Q ss_pred --CHHHHHHHHHHHHHHHH
Q 012124 446 --SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 446 --~~~~i~~~l~~l~~~l~ 462 (470)
+++|++.+++.|+++.+
T Consensus 385 ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 385 YNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 88999999999988754
No 136
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=5.5e-29 Score=244.83 Aligned_cols=320 Identities=17% Similarity=0.186 Sum_probs=232.4
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 187 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~ 187 (470)
.|+.+.+++.+... ...| + +..++.+.+.+.+.+.+|.+ .++.+++++|+++++..++.+++++||+|++.+++
T Consensus 10 ~~~~v~~a~~~~~~--~~~~-~--~~~~~~~~~~~~la~~~g~~-~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~ 83 (356)
T cd06451 10 VPPRVLKAMNRPML--GHRS-P--EFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNG 83 (356)
T ss_pred CCHHHHHHhCCCcc--CCCC-H--HHHHHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCC
Confidence 46777777754321 1122 2 34455556666666666752 33457888989999999999999999999999988
Q ss_pred CCC--hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEE
Q 012124 188 WVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 264 (470)
Q Consensus 188 y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~i 264 (470)
|++ +...++..|++++.++.+++ +.+|++.+++.+++ ++++|++++++||||..++ +++|.++|+++ |++|
T Consensus 84 ~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~-~~~l 157 (356)
T cd06451 84 VFGDRWADMAERYGADVDVVEKPWG--EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH-DALL 157 (356)
T ss_pred chhHHHHHHHHHhCCCeEEeecCCC--CCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc-CCEE
Confidence 776 45677889999999998643 46899999999987 8999999999999999999 77788999999 9999
Q ss_pred EEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHH---Hhh-------------
Q 012124 265 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQS------------- 328 (470)
Q Consensus 265 I~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~---~~~------------- 328 (470)
|+|++|+. +....++.. .+..+++.|.+|.++ .+.++||++.++++++.+.. ...
T Consensus 158 i~D~~~~~----g~~~~~~~~----~~~d~~~~s~~K~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T cd06451 158 IVDAVSSL----GGEPFRMDE----WGVDVAYTGSQKALG-APPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWG 228 (356)
T ss_pred EEeeehhc----cCccccccc----cCccEEEecCchhcc-CCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhc
Confidence 99998863 111122222 233466788999997 44568999999998877653 000
Q ss_pred ---hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC---ceEEEeeeccCccCCc
Q 012124 329 ---QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSE 402 (470)
Q Consensus 329 ---~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~~~~~~~~~ 402 (470)
....+++...+.++.++++.- ....++++.++++++++++.+.|.++ |+++..+. .+.++|+.++...
T Consensus 229 ~~~~~~~t~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--- 302 (356)
T cd06451 229 EGYSYPHTPPVNLLYALREALDLI--LEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEGV--- 302 (356)
T ss_pred ccCCCCCCChHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCCC---
Confidence 112223444445555555431 13346677888888999999999887 77665332 4555677776432
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 403 AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 403 ~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
+..++++.|.+++||.+.+|..+..+++||++++. ++++++++++.|+++++
T Consensus 303 --------~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 303 --------DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred --------CHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 67889998877669999998765556799999985 89999999999998764
No 137
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=2.3e-28 Score=244.22 Aligned_cols=333 Identities=19% Similarity=0.197 Sum_probs=234.7
Q ss_pred cCCCeEEccCCC-CCCCChHHHHHHHHHHHHcC---C---CCC-CCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 92 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---F---TRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 92 ~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~---~---~~y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
+|..+++|+.++ .++...+.+++++.+++.+. . ..| .......+|++.+++++ |. +.+++++|+
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~----~~~~~~~sG 123 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF----ESCLLCQSG 123 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC----CcEEEECCH
Confidence 455678887765 56667889999999988641 1 111 11123456666666664 42 467889999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCCCCCccc
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGS 242 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPtG~ 242 (470)
++|+..+++++..+||.|+++.+.|......++..|++++.++. .|++.|++++++ ++++|++++++||||.
T Consensus 124 ~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~tG~ 196 (407)
T PRK07179 124 WAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYSTTGT 196 (407)
T ss_pred HHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCc
Confidence 99999999999999999999999998888888889998876653 489999999865 5788888999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHH
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 322 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~ 322 (470)
++| +++|.++|+++ |+++|+||+|+...++..+...+..++-.....+++.|+||.+| + |+||+++++++++.
T Consensus 197 i~p---l~~I~~l~~~~-~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~--~~G~l~~~~~~~~~ 269 (407)
T PRK07179 197 IAP---LADIVDIAEEF-GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-G--RAGIITCPRELAEY 269 (407)
T ss_pred ccc---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-c--cCeEEEeCHHHHHH
Confidence 999 78899999999 99999999998644432222222223211123588999999996 3 68999999998887
Q ss_pred HHHHhhh--ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccC
Q 012124 323 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 400 (470)
Q Consensus 323 l~~~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~ 400 (470)
+...... ...+.++....++.++++. .......+++++++++++.+.|+++ |+++. +. +.++++.++...
T Consensus 270 ~~~~~~~~~~~~t~~~~~~aa~~aal~~----~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~-~~i~~l~~~~~~- 341 (407)
T PRK07179 270 VPFVSYPAIFSSTLLPHEIAGLEATLEV----IESADDRRARLHANARFLREGLSEL-GYNIR-SE-SQIIALETGSER- 341 (407)
T ss_pred HHHhCcCeeeCCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CC-CCEEEEEeCCHH-
Confidence 7654432 2222233333333344543 2223456788899999999999888 77765 33 345677765321
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC---CCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 401 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAF---GDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f---~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+...+.+.|.++ ||.+..-... ...+++||+++. ++++++++++.|++++++..
T Consensus 342 ----------~~~~~~~~L~~~-GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 342 ----------NTEVLRDALEER-NVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred ----------HHHHHHHHHHHC-CceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 345666666655 8874311000 124689999986 99999999999999988653
No 138
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=5.6e-29 Score=243.09 Aligned_cols=321 Identities=17% Similarity=0.144 Sum_probs=227.3
Q ss_pred EccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCC
Q 012124 98 RLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP 177 (470)
Q Consensus 98 ~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~ 177 (470)
||++.+|. .+++.+++++.+.... ...|++.....++++.+++++ | ++++++++|+++++..++.+++++
T Consensus 1 ~~~~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~~----g----~~~~~~~~~gt~a~~~~~~~l~~~ 70 (338)
T cd06502 1 DFRSDTVT-GPTPEMLEAMAAANVG-DDVYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHTQP 70 (338)
T ss_pred CcccccCC-CCCHHHHHHHHhcccC-CcccCCCHHHHHHHHHHHHHh----C----CCeEEEecCchHHHHHHHHHhcCC
Confidence 35555554 4678888888876533 235666666777777777765 4 457888888889999999999999
Q ss_pred CCeEEEcCCCCCChHH---HHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-------CceEEEEcCCCCCcccCCCHH
Q 012124 178 GDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKN 247 (470)
Q Consensus 178 gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~i~l~~p~nPtG~~~s~~ 247 (470)
||+|++++|+|..+.. .....|++++.++.+ + +.+|++.+++++++ ++++|++++|+|| |..++.+
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~ 146 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLD 146 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHH
Confidence 9999999999876543 345689999999874 2 45999999999864 6889999999997 6677999
Q ss_pred HHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh
Q 012124 248 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 327 (470)
Q Consensus 248 ~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~ 327 (470)
++++|+++|+++ |+++|+|++|..+....... ++..+.. +..+++.|+||.++++| .+++++++++++.+....
T Consensus 147 ~l~~i~~~~~~~-~~~livDea~~~~~~~~~~~-~~~~~~~--~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~ 220 (338)
T cd06502 147 ELKAISALAKEN-GLPLHLDGARLANAAAALGV-ALKTYKS--GVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRR 220 (338)
T ss_pred HHHHHHHHHHHc-CCeEeechHHHHHHHHhcCC-CHHHHHh--cCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHH
Confidence 999999999999 99999999986432211111 2222221 22356889999998777 234568999999888765
Q ss_pred hhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccC
Q 012124 328 SQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 405 (470)
Q Consensus 328 ~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 405 (470)
..+ ....+.+.+.++...|+. ..+. +..+++.++++++.+.|+++ |+.+.++.+++ +.++++..-
T Consensus 221 ~~~~~~~~~~~~~~~a~~~~L~~----~~~~-~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~v~~~~~~------ 287 (338)
T cd06502 221 KQAGGGMRQSGFLAAAGLAALEN----DLWL-RRLRHDHEMARRLAEALEEL-GGLESEVQTNI-VLLDPVEAN------ 287 (338)
T ss_pred HHhCCChhhHHHHHHHHHHHhcC----chHH-HHHHHHHHHHHHHHHHHHhc-CCCcccccCCe-EEEecCCcc------
Confidence 433 334566777777777764 2233 44466777788999999887 55665666666 444554210
Q ss_pred CCCCCCHHHHHHHHHH--cCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012124 406 FGKIENSESLCRYLLD--KAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 406 ~~~~~~~~~l~~~L~~--~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
.....+.+.+.+ +.||.+.+.. .+++|++++. ++++++++++++++
T Consensus 288 ----~~~~~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 288 ----AVFVELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ----HHHHHHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 012233333331 3589887742 2789999985 88999999998864
No 139
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=1.3e-28 Score=246.11 Aligned_cols=338 Identities=16% Similarity=0.120 Sum_probs=241.2
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHc-------CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-------GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~-------~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
+..++|..+.... ++.+++++.+.+.. +...|....+..++++.+++++.+.+|.+ ..+|++++ ++++
T Consensus 19 ~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a 93 (402)
T cd00378 19 RETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQA 93 (402)
T ss_pred HhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHH
Confidence 3457787666543 67888888766532 12335556677888888888888778853 44566665 5689
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHH-----HHHcCCEEEEecCcCC-CCCccCHHhHhhhcc-CCceEEEEcCCCCC
Q 012124 167 ILQAVLAVCSPGDEVIIPAPFWVSYPEM-----ARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNP 239 (470)
Q Consensus 167 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~-~~~~~i~l~~p~nP 239 (470)
+..++.++++|||+|++++|+|+++... ++..|.+++.++++.+ +++.+|++.+++.+. ++++++++++++||
T Consensus 94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~ 173 (402)
T cd00378 94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP 173 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC
Confidence 9999999999999999999999876543 6678888877777644 257799999999984 68999988888886
Q ss_pred cccCCCHHHHHHHHHHHHhCCCEEEEEeccc-cccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH-
Q 012124 240 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK- 317 (470)
Q Consensus 240 tG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~-~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~- 317 (470)
+ ..+ +++|+++|+++ |++||+|++| .++.+.+....++. . ..++++|+||.+ +|+|.||+++++
T Consensus 174 ~--~~~---~~~I~~l~~~~-~~~li~D~a~~~g~~~~g~~~~~~~---~---~dv~~~s~sK~l--~G~~gg~i~~~~~ 239 (402)
T cd00378 174 R--PID---FKRFREIADEV-GAYLLVDMAHVAGLVAGGVFPNPLP---G---ADVVTTTTHKTL--RGPRGGLILTRKG 239 (402)
T ss_pred C--CcC---HHHHHHHHHhc-CCEEEEEccchhhhhhcccCCCccc---C---CcEEEeccccCC--CCCCceEEEeccH
Confidence 4 445 88999999999 9999999995 44444432222222 1 127899999987 788999999987
Q ss_pred HHHHHHHHHhhhccCCCChHHHH-HHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeec-CCCceEEEeeec
Q 012124 318 HFVAACNKIQSQFTSGASSISQK-AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDF 395 (470)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~ 395 (470)
++++.+.........+.+.+.+. ++..++... ...+.++.+++++++++.+.+.|+++ |+.+. .+.+++++|+++
T Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~ 316 (402)
T cd00378 240 ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEA--LEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDL 316 (402)
T ss_pred HHHHHHHHHhCccccCCchHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeC
Confidence 89888877655444444433333 323333321 12256677788999999999999987 88765 456789999999
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC----C--CCCCcEEEEeec------CHHHHHHHHHHHHHHHHh
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA----F--GDDTCIRISYAA------SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~----f--~~~~~iRls~~~------~~~~i~~~l~~l~~~l~~ 463 (470)
++.. .+...+.+. ++++||.+.++.. + ..++++|++++. ++++++.+++.|++++++
T Consensus 317 ~~~~----------~~~~~~~~~-l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 317 RPKG----------ITGKAAEDA-LEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CccC----------CCHHHHHHH-HHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 7421 034555554 4566999976432 2 124689999865 489999999999998765
Q ss_pred h
Q 012124 464 L 464 (470)
Q Consensus 464 ~ 464 (470)
-
T Consensus 386 ~ 386 (402)
T cd00378 386 A 386 (402)
T ss_pred c
Confidence 3
No 140
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=3.3e-28 Score=242.84 Aligned_cols=334 Identities=17% Similarity=0.171 Sum_probs=234.0
Q ss_pred CCCeEEccCCC-CCCCChHHHHHHHHHHHHcCCCC-------CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 93 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR-------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 93 ~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~-------y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
++++++|++++ ..+..++.+++++.+++.+.... |+...-..+|++.++++ .|. + ..+++++++
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~----~g~---~-~~l~~~sG~ 115 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADL----HGK---E-SALVFTSGY 115 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHH----hCC---C-eEEEECchH
Confidence 35678888886 66777899999999998763221 11222234555555555 442 2 345555557
Q ss_pred HHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCC
Q 012124 165 QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSN 238 (470)
Q Consensus 165 ~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~n 238 (470)
+++..++..+.. +++.|+.+...|......+...|+++..++. .|++.+++.++ +++++|++++|+|
T Consensus 116 ~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~~~ 188 (402)
T TIGR01821 116 VANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESVYS 188 (402)
T ss_pred HHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCCCC
Confidence 788878887764 6777777666666666677788888766653 26666666664 2578899999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~ 318 (470)
|||.+.+ +++|.++|++| ++++|+||+|+...++...........-..+.+++++||||.+|++| ||++++++
T Consensus 189 ~~G~~~~---l~~i~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~ 261 (402)
T TIGR01821 189 MDGDIAP---IEEICDLADKY-GALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRK 261 (402)
T ss_pred CCCCccC---HHHHHHHHHHc-CCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHH
Confidence 9999999 88899999999 99999999998544432221111111111234688899999998778 99999999
Q ss_pred HHHHHHHHhhh--ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeecc
Q 012124 319 FVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 396 (470)
Q Consensus 319 ~~~~l~~~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~ 396 (470)
+++.+...... ++.+.++..+.++.++|+.- ++. ...++.++++++++.+.|+++ |+++..+.+++ +++.++
T Consensus 262 ~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-~~i~~~ 335 (402)
T TIGR01821 262 LIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL---KES-QDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHI-VPVIIG 335 (402)
T ss_pred HHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh---hcC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeC
Confidence 99988765433 24456777888888888742 222 445566678888999999887 78777666665 455554
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
... ...++.+.|++++||.+.+...... .+++|++++. ++++++++++.|+++++++.
T Consensus 336 ~~~-----------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 336 DAA-----------LCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred CHH-----------HHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 310 3567888887777999988543332 3589999975 99999999999999988753
No 141
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.97 E-value=1e-28 Score=247.28 Aligned_cols=356 Identities=12% Similarity=0.096 Sum_probs=243.2
Q ss_pred hcCCCeEEccCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 91 QAGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~~~~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
.+|+.++|+..|...... ++.+.+++.+++.+..+.+.+..+.+ ....+++++....+.+.. +++++++++++++
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGsea~ 115 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSEAV 115 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHHHH
Confidence 367788999988655444 78999999999876433332222333 445888888876664333 3555555555766
Q ss_pred HHHHHHh---cCCCCeEEEcCCCCCChHHHHHHcCCEEE----------------EecCcCCCCCcc--CHHhHhhhcc-
Q 012124 168 LQAVLAV---CSPGDEVIIPAPFWVSYPEMARIADATPV----------------ILPTRISENFLL--DPKVLESKLT- 225 (470)
Q Consensus 168 ~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~----------------~v~~~~~~~~~~--d~~~l~~~l~- 225 (470)
+.+++.. .++ ..|+..+++|++....+...+.... ++|.+. .+... +++.|++.++
T Consensus 116 e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~ 193 (425)
T PRK08088 116 ENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFKN 193 (425)
T ss_pred HHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHh
Confidence 6555543 334 4556669999998866655443211 122211 11101 1456777774
Q ss_pred ----CCceEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccC
Q 012124 226 ----EKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 300 (470)
Q Consensus 226 ----~~~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~s 300 (470)
++..++++ +..++++...++.+++++|.++|++| |++||+||+|.++.+.+. +..+.. .+.+..+.|||
T Consensus 194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~-~~~lI~Dev~~g~g~~g~----~~~~~~-~~~~pdi~s~s 267 (425)
T PRK08088 194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEH-GIMLIADEVQTGAGRTGT----LFAMEQ-MGVAADLTTFA 267 (425)
T ss_pred ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcc----hhHHhh-cCCCCCEEEEe
Confidence 34566666 44478888899999999999999999 999999999998655432 111111 23345589999
Q ss_pred cccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 301 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 301 K~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
|.++ +|+|+||+++++++++.+.......+++.+++.|.++.++|+.+.. +++++++++..+.+++.+.+.+.+.|.+
T Consensus 268 K~l~-~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 345 (425)
T PRK08088 268 KSIA-GGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEI 345 (425)
T ss_pred cccc-CCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9998 9999999999999999987777777888999999999999997654 6778888877776777666665556543
Q ss_pred eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
...... |+++|+.+.+....... .......+.+.+.++ ||.+.|+..| .+.+||+++. ++++|++++++|+
T Consensus 346 ~~v~g~-G~~~~l~l~~~~~~~~p---~~~~~~~l~~~~~~~-Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~ 418 (425)
T PRK08088 346 GDVRGL-GAMIAIELFEDGDHSKP---NAKLTAQIVARARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIA 418 (425)
T ss_pred EEEecc-ceEEEEEEecCCCCCCC---CHHHHHHHHHHHHhC-CCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHH
Confidence 222222 88899998432100000 001356788877765 8988886554 4789999994 8999999999999
Q ss_pred HHHHhhC
Q 012124 459 KGLLTLR 465 (470)
Q Consensus 459 ~~l~~~~ 465 (470)
+++++++
T Consensus 419 ~~l~~~~ 425 (425)
T PRK08088 419 QCFDEAK 425 (425)
T ss_pred HHHHhhC
Confidence 9998654
No 142
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=5e-28 Score=242.10 Aligned_cols=333 Identities=19% Similarity=0.201 Sum_probs=234.4
Q ss_pred CCCeEEccCCC-CCCCChHHHHHHHHHHHHcCCC-------CCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 93 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFT-------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 93 ~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~-------~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
++++++|++++ ..+..++.+++++.+++.+... .|++..-..+|++.++++ .| .++.+++++|.
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~----~g---~~~~~~~~sG~- 116 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADL----HG---KEAALVFTSGY- 116 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHH----hC---CCcEEEECcHH-
Confidence 46789998886 5677788999999998875322 122333345555555555 44 24556666664
Q ss_pred HHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCC
Q 012124 165 QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSN 238 (470)
Q Consensus 165 ~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~n 238 (470)
++...++..+.. +++.|+.....|.+....++..|+++..++. .|++.+++.++ +++++|++++++|
T Consensus 117 ~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~v~s 189 (407)
T PRK09064 117 VSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFESVYS 189 (407)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeCCCC
Confidence 565656666543 7777777766666666677778888766653 36777777664 4678999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC-CCceEEEeccCcccccccceeeEEEcCH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
|+|...+ +++|.++|++| |++||+||+|+...|+.... .+....+. .+.+|+++||||.+|++| ||+++++
T Consensus 190 ~~G~~~~---l~~i~~l~~~~-~~~livDEa~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~ 261 (407)
T PRK09064 190 MDGDIAP---IAEICDLADKY-NALTYLDEVHAVGMYGPRGG-GIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSA 261 (407)
T ss_pred CCccccC---HHHHHHHHHHc-CCEEEEECCCcccccCCCCC-ChHHhcCCCCCCeEEEEecchhhhccC---ceEecCH
Confidence 9999999 88899999999 99999999998444432221 22222111 234788999999998777 9999999
Q ss_pred HHHHHHHHHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeec
Q 012124 318 HFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 395 (470)
Q Consensus 318 ~~~~~l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~ 395 (470)
++++.+......+ +.+.++..+.++.+.++.- ++ ....+++++++++++.+.|+++ |+++..+.+++ +++.+
T Consensus 262 ~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~---~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-v~i~~ 335 (407)
T PRK09064 262 ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHL---KE-SNEERERHQERAAKLKAALDAA-GIPVMPNESHI-VPVMV 335 (407)
T ss_pred HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEe
Confidence 9999887654432 3456677777777777641 11 2344677888899999999887 77776655554 56666
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
++.. +..++.++|+++.||.+.+...... .+++|++++. ++++++++++.|+++++++.
T Consensus 336 ~~~~-----------~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 336 GDPE-----------KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred CCHH-----------HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 5321 4567888887666999988654332 2579999885 89999999999999987653
No 143
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=4.2e-28 Score=238.68 Aligned_cols=325 Identities=14% Similarity=0.142 Sum_probs=223.9
Q ss_pred CCCChHHHHHHHHHHHHcC-C----C---CCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 012124 105 DFDTPVLIAEAGINAIREG-F----T---RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS 176 (470)
Q Consensus 105 ~~~~~~~~~~a~~~~~~~~-~----~---~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~ 176 (470)
+-+..+++.+++.+..... . . .+....-..++++.+++++ |. +++++|+|+++++..++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~----~~i~~~~g~t~al~~~l~~~~~ 81 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM----DEARVTPGAREGKFAVMHSLCE 81 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC----ceEEEeCCHHHHHHHHHHHhcC
Confidence 3344677777777765321 0 0 1111123457777777775 43 7899999999999999999999
Q ss_pred CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-------CCceEEEEcCCCCCcccCCCHHHH
Q 012124 177 PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-------EKSRLLILCSPSNPTGSVYPKNLL 249 (470)
Q Consensus 177 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-------~~~~~i~l~~p~nPtG~~~s~~~~ 249 (470)
+||+|+++.++|.+....++..|++++.++.+.++++.+|++.++++++ ++++++++++|+||||...+ +
T Consensus 82 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~ 158 (361)
T cd06452 82 KGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---A 158 (361)
T ss_pred CCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---H
Confidence 9999999999988887788999999999999765556799999999885 37889999999999999877 8
Q ss_pred HHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhh
Q 012124 250 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 329 (470)
Q Consensus 250 ~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~ 329 (470)
++|+++|+++ +++||+|++|..... ..+... .+..++++|+||.++ ++.|+||+++++++++.+.+....
T Consensus 159 ~~i~~~~~~~-~~~vivD~a~~~g~~----~~~~~~----~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~ 228 (361)
T cd06452 159 KKIAKVCHEY-GVPLLLNGAYTVGRM----PVSGKE----LGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQM 228 (361)
T ss_pred HHHHHHHHHc-CCeEEEECCcccCCc----CCCHHH----cCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccc
Confidence 8999999999 999999999974211 112222 245699999999997 666999999999999988765532
Q ss_pred cc--------CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC--CCceEEEeeeccCcc
Q 012124 330 FT--------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTYY 399 (470)
Q Consensus 330 ~~--------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~~g~~~~~~~~~~~ 399 (470)
++ ...+...+.++.+.+.. ..+++++..+. .++++++.+.|++++|+++.. +....++.++.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~ 304 (361)
T cd06452 229 FKIKEVELLGCTLRGAPLVTLMASFPH---VKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD 304 (361)
T ss_pred cccceeeeeccccCchHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcc
Confidence 11 11112223334444432 12334433333 345578889999988887752 222233555654210
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHH
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 461 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~-~~~~i~~~l~~l~~~l 461 (470)
.. . ........++.+.|+++ ||.+.. .+..+++|++... ++++++.+++.|+++.
T Consensus 305 ~~-~--~~~~~~~~~~~~~L~~~-gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 305 EI-A--KKHKRRGYFLYSELKKR-GIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hh-h--hhccccchhHHHHHHHc-CceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 00 0 00000234688888766 898532 2345689999855 8899999999998764
No 144
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=2.3e-28 Score=242.51 Aligned_cols=336 Identities=13% Similarity=0.086 Sum_probs=234.2
Q ss_pred EccCCCCCCCChHHHHHHHHHHHHcCCCCCCC--CcC--cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 98 RLAAGEPDFDTPVLIAEAGINAIREGFTRYTP--NAG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 98 ~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~--~~g--~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
.|..+... ++|+.+++++.+.+.....++.. ..| ..++.+.+.+.+.+..| +++++|++|+|+++++..++.+
T Consensus 3 yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 3 YLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG--GEEQGIYFTSGGTESNYLAIQS 79 (381)
T ss_pred eccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCcHHHHHHHHHHH
Confidence 34444443 34777888888877642222211 011 12233334444444445 3678999999999999988888
Q ss_pred hc----CCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCH
Q 012124 174 VC----SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 246 (470)
Q Consensus 174 l~----~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~ 246 (470)
++ ++||.|++....|+++.. .++..|++++.++++. ++.+|++.|++.+++++++|++++|+||||..++
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~- 156 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHANSEIGTIQP- 156 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh-
Confidence 75 578999999877766544 4567899999999863 3458999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHH-HHHHHH
Q 012124 247 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNK 325 (470)
Q Consensus 247 ~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~-~~~l~~ 325 (470)
+++|.++|+++ |+++|+|+++... .....+ .. .+..+++.|++|.+|.+| +|++++++++ ...+..
T Consensus 157 --~~~I~~l~~~~-~~~vivD~~~~~g----~~~~~~---~~-~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~ 223 (381)
T PRK02948 157 --IAEIGALLKKY-NVLFHSDCVQTFG----KLPIDV---FE-MGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFP 223 (381)
T ss_pred --HHHHHHHHHHc-CCEEEEEChhhcc----ccccCc---cc-CCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCccc
Confidence 77899999999 9999999776531 111122 22 356688999999998777 7998877654 111100
Q ss_pred ----HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC-ceE----EEeeecc
Q 012124 326 ----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAF----YLFIDFS 396 (470)
Q Consensus 326 ----~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~----~~~~~~~ 396 (470)
......++++.+.+.++.++++. ..++.++.+++.++.++++.+.|+++ |+++.... ..+ .+-+.++
T Consensus 224 ~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~ 299 (381)
T PRK02948 224 GTTHEKGFRPGTVNVPGIAAFLTAAEN---ILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIK 299 (381)
T ss_pred CCCCCCCcCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeC
Confidence 01123456788888888888875 24677888899999999999999988 65543221 121 1112223
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-------------------CCCcEEEEeec--CHHHHHHHHH
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-------------------DDTCIRISYAA--SLTTLQAAVE 455 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~-------------------~~~~iRls~~~--~~~~i~~~l~ 455 (470)
.. +..++...|. ++||.+.+|..+. ..+++|+|++. +++|++.+++
T Consensus 300 ~~------------~~~~~~~~l~-~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~ 366 (381)
T PRK02948 300 GI------------EGQYTMLECN-RRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIH 366 (381)
T ss_pred CC------------CHHHHHHhcc-cCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHH
Confidence 21 5567777764 5599999887421 13689999986 8999999999
Q ss_pred HHHHHHHhhCCCCC
Q 012124 456 RIKKGLLTLRPGVP 469 (470)
Q Consensus 456 ~l~~~l~~~~~~~~ 469 (470)
.|+++++++-+++.
T Consensus 367 ~l~~~~~~~~~~~~ 380 (381)
T PRK02948 367 ALETIGNQFYRGVK 380 (381)
T ss_pred HHHHHHHHHhcccC
Confidence 99999988766653
No 145
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=7.2e-28 Score=239.57 Aligned_cols=325 Identities=15% Similarity=0.104 Sum_probs=247.6
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 187 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~ 187 (470)
.++.+++++.+. ...| ...+..++++.+.+.+.+.+|.+ ..+.+++++++++++..++..++++||+|++.+++
T Consensus 20 ~~~~V~~a~~~~----~~~~-~~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~ 93 (401)
T PLN02409 20 IPERVLRAMNRP----NEDH-RSPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIG 93 (401)
T ss_pred CCHHHHHHhcCC----CCCC-CCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 367777666443 3333 35577899999999999988864 33578889999999999999999999999999999
Q ss_pred CCCh--HHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC----CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012124 188 WVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261 (470)
Q Consensus 188 y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~ 261 (470)
|++. ...++..|++++.++.+.+ ..+|++.+++++++ +++++++++++||||..+|.+++.++++ |+++ |
T Consensus 94 ~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~-g 169 (401)
T PLN02409 94 QFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH-P 169 (401)
T ss_pred chhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc-C
Confidence 9766 3667888999999998643 34899999999975 7899999999999999999665555555 9999 9
Q ss_pred EEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh-------------
Q 012124 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------------- 328 (470)
Q Consensus 262 ~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~------------- 328 (470)
+++|+|++++. +.....+ +. .+..+++.|.+|.++.| .++||+++++++++.+.....
T Consensus 170 ~~~vvD~v~s~----g~~~id~---~~-~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T PLN02409 170 ALLLVDGVSSI----GALDFRM---DE-WGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKF 240 (401)
T ss_pred cEEEEEccccc----CCccccc---cc-cCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHH
Confidence 99999999873 2111122 21 24457888889999633 479999999998887653210
Q ss_pred -----hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC----ceEEEeeeccCcc
Q 012124 329 -----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYY 399 (470)
Q Consensus 329 -----~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~~~~~~~~~~ 399 (470)
...++++...+.++.++++.- .+...+++++++++.++++.+.|+++ |+++..+. ++..+|+.+|+.+
T Consensus 241 ~~~g~~~~~Tp~~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~ 317 (401)
T PLN02409 241 YKLGTYWPYTPSIQLLYGLRAALDLI--FEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEGI 317 (401)
T ss_pred HhcCCCCCCCccHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCCC
Confidence 012356666677777777641 13457888899999999999999887 88766542 2344677887654
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+..++.+.|++++||.+.+|..-...+.||++.+. +.+++..++..|+++++++.
T Consensus 318 -----------~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 318 -----------DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred -----------CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 67788888888889999998753346789999987 88999999999999998776
No 146
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=8.6e-28 Score=239.87 Aligned_cols=329 Identities=17% Similarity=0.178 Sum_probs=230.1
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcCC----CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~----~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
.+.|..+.+.. +|+.+++++.+.+.... ..|....+..++.+.+.+.+.+.+|. ++++|++++|+++++..++
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~--~~~~v~~~~~~t~~l~~~~ 94 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNA--DPPEVVFGANATSLTFLLS 94 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCC--CCCeEEEeCCHHHHHHHHH
Confidence 57777766663 57788888888876421 23544444444444444444444553 4568999999999998877
Q ss_pred HHh---cCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCC
Q 012124 172 LAV---CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244 (470)
Q Consensus 172 ~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~ 244 (470)
.++ .+|||+|++.+|.|++.. ..++..|++++.++++.+ ++.+|++.++++++++++++++++|+||||..+
T Consensus 95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAASNTLGSIV 173 (397)
T ss_pred HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccC
Confidence 775 689999999999997754 445678999999998753 356899999999988999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 324 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~ 324 (470)
+ +++|.++|+++ |+++|+|+++.. +.....+.. .+..+++.|++|.+| .|+||+++++++++.+.
T Consensus 174 ~---~~~i~~~~~~~-~~~~ivD~a~~~----~~~~~~~~~----~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~ 238 (397)
T TIGR01976 174 D---LAAITELVHAA-GALVVVDAVHYA----PHGLIDVQA----TGADFLTCSAYKFFG---PHMGILWGRPELLMNLP 238 (397)
T ss_pred C---HHHHHHHHHHc-CCEEEEehhhhc----cccCCCHHH----cCCCEEEEechhhcC---CceEEEEEcHHHHhhCC
Confidence 8 88999999999 999999999752 221222221 244577799999885 46899999999887765
Q ss_pred HHhhhcc----------CCCChHH---HHHHHHHHhc-CCC-----C---hHHHHHHHHHHHHHHHHHHHHhccCCCCee
Q 012124 325 KIQSQFT----------SGASSIS---QKAGVAALGL-GYA-----G---GEVVSKMVKAFRERRDFLVKSFGELEGVKM 382 (470)
Q Consensus 325 ~~~~~~~----------~~~~~~~---q~a~~~~l~~-~~~-----~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 382 (470)
.....+. .+++... ..++..++.. |.. . ...+++++++..+.++++.+.|++++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 318 (397)
T TIGR01976 239 PYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTL 318 (397)
T ss_pred CccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 4322111 1222222 2333333332 100 0 013566777778888999999988867877
Q ss_pred cCC-----CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----------CCCcEEEEeec-
Q 012124 383 SEP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----------DDTCIRISYAA- 445 (470)
Q Consensus 383 ~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~-----------~~~~iRls~~~- 445 (470)
..+ .+++ +.+.+++. +..++.++|.++ ||.+..|..|. ..++||+|++.
T Consensus 319 ~~~~~~~~~~~~-~~~~~~~~------------~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 384 (397)
T TIGR01976 319 YGVARLAARVPT-VSFTVHGL------------PPQRVVRRLADQ-GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHY 384 (397)
T ss_pred eCCCCccCCCce-EEEEeCCc------------CHHHHHHHHHHC-CeEEEeCccchHHHHHHhCCCCCCCeEEEEeecc
Confidence 654 3454 55565532 567888888665 99999886553 23689999986
Q ss_pred -CHHHHHHHHHHH
Q 012124 446 -SLTTLQAAVERI 457 (470)
Q Consensus 446 -~~~~i~~~l~~l 457 (470)
++++++.+++.|
T Consensus 385 ~t~~di~~l~~~l 397 (397)
T TIGR01976 385 NTAEEVDRLLEAL 397 (397)
T ss_pred CCHHHHHHHHHhC
Confidence 889999888754
No 147
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.97 E-value=3e-28 Score=244.60 Aligned_cols=347 Identities=15% Similarity=0.164 Sum_probs=238.8
Q ss_pred cCCCeEEccCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~-~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+|||..|.+ .+. .++.+.+++.+++.. ...|....+..++...+++.+.+.+|. ..+++++++|+++++.
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgsea~~ 110 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAK-LTHFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEAVE 110 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHh-CcCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHHHHH
Confidence 5778999998743 344 478899999998865 344544435677788888888777664 5789999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHcC-------------CEEEEecCcCC----CCCccCHHhHhhhccC---
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRIS----ENFLLDPKVLESKLTE--- 226 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~----~~~~~d~~~l~~~l~~--- 226 (470)
.+++.+. .+++.|++.+++|++........+ .+++.+|.+.. ..+..|++.|++.+++
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 9998873 578999999999999765443322 23556665421 1244589999998865
Q ss_pred CceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 227 KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
+++++++...+|++|..+ +.+++++|.++|++| ++++|+||+|..+...+.. ... ... +....+.||||.++
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~g~g~~g~~-~~~-~~~---~~~~d~~t~sK~l~- 263 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH-GILLIADEVQTGFGRTGKM-FAF-EHF---GVEPDIVTLGKGLG- 263 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcch-hhH-hhc---CCCCCeEEEccccc-
Confidence 455555555577889876 677899999999999 9999999999976333321 111 111 11112568999998
Q ss_pred ccceeeEEEcCHHHHHHH--HHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---CC
Q 012124 306 TGWRLGYIAGPKHFVAAC--NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GV 380 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l--~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~ 380 (470)
.|+|+||+++++++++.+ .......+++.+++.|.++.+.|+.- ++ .++.++++++.+.+.+.|+++. ++
T Consensus 264 ~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~ 338 (413)
T cd00610 264 GGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL---EE--EGLLENAAELGEYLRERLRELAEKHPL 338 (413)
T ss_pred CccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 689999999999999886 33344456778889888888777631 11 2345555666666666665531 22
Q ss_pred eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
.......|.++|+.+++.... . .........+++.|.++ ||.+.|+. .+++|++++. +++++++++++|+
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~~--~-~~~~~~~~~~~~~l~~~-gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~ 410 (413)
T cd00610 339 VGDVRGRGLMIGIELVKDRAT--K-PPDKELAAKIIKAALER-GLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALD 410 (413)
T ss_pred EEEeecCceEEEEEEecCCCc--C-CcchHHHHHHHHHHHHC-CeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 111233466688887642000 0 00001456788887765 99999975 5789998775 8999999999998
Q ss_pred HHH
Q 012124 459 KGL 461 (470)
Q Consensus 459 ~~l 461 (470)
+++
T Consensus 411 ~~l 413 (413)
T cd00610 411 EAL 413 (413)
T ss_pred HhC
Confidence 753
No 148
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=8.1e-28 Score=240.22 Aligned_cols=329 Identities=20% Similarity=0.249 Sum_probs=234.5
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEec-ChHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSI 167 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~-g~~~al 167 (470)
.+++.++.|.|++.+|+.+.++..++ .....|.+ ..|.+++++++++++.+.+|. +.+++++++ |++++.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~~ 95 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDEATAAAE 95 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCchHHHHH
Confidence 35689999999998888888777666 33345655 689999999999999998885 445676666 454555
Q ss_pred HHHHHHhcCC--CCeEEEcCCCCCChHHHHHHcC----CEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcc
Q 012124 168 LQAVLAVCSP--GDEVIIPAPFWVSYPEMARIAD----ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 241 (470)
Q Consensus 168 ~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG 241 (470)
..+..+++.+ ||+|++++|.|+.+...+...| ++++.++.+. ++.+|++.+++++++++++|++++|+ |||
T Consensus 96 ~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~~~-~~G 172 (398)
T cd00613 96 AAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQYPN-TLG 172 (398)
T ss_pred HHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEECCC-CCc
Confidence 5555556666 9999999999999998888877 9999999853 34589999999999899999998885 899
Q ss_pred cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc----cceeeEEEcCH
Q 012124 242 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGPK 317 (470)
Q Consensus 242 ~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~----G~r~G~~~~~~ 317 (470)
.+. +.+++|.++|++| |+++|+|+++...... .... ..+..++++|++|.+ +| |+++||++.++
T Consensus 173 ~~~--~~l~~i~~la~~~-g~~livD~~~~~~~~~----~~~~----~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~ 240 (398)
T cd00613 173 VFE--DLIKEIADIAHSA-GALVYVDGDNLNLTGL----KPPG----EYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKK 240 (398)
T ss_pred eec--chHHHHHHHHHhc-CCEEEEEeccccccCC----CChH----HcCCCEEEeeccccC-CCCCCCCCceeEEEEhh
Confidence 984 3469999999999 9999999987542211 0111 124569999999998 46 78999999998
Q ss_pred HHHHHHHHH-----------------------------hhhccCCCC-hHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 012124 318 HFVAACNKI-----------------------------QSQFTSGAS-SISQKAGVAALGLGYAGGEVVSKMVKAFRERR 367 (470)
Q Consensus 318 ~~~~~l~~~-----------------------------~~~~~~~~~-~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (470)
++++.+... .....+..+ ...|.+...+... .+..++++++++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~---~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 241 ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL---GPEGLKEIAERAHLNA 317 (398)
T ss_pred hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHH
Confidence 887764110 000011122 2333333333332 2567788899999999
Q ss_pred HHHHHHhccCCCCeecCCCceEE--EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec
Q 012124 368 DFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA 445 (470)
Q Consensus 368 ~~l~~~L~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~ 445 (470)
+++.+.|+++++.. .+.+.++ ++++++... ..+..++++.|.++ ||.+.... ....+.+|++++.
T Consensus 318 ~~l~~~L~~~~~~~--~~~~~~~~~v~~~~~~~~---------~~~~~~~~~~L~~~-gi~~~~~~-~~~~~~lRis~~~ 384 (398)
T cd00613 318 NYLAKRLKEVGGVL--PFNGPFFHEFVLRLPPLY---------GIRAEDLAKALIDG-GFHAPTMY-LPVDGTLMIEPTE 384 (398)
T ss_pred HHHHHHHHhcCCcc--cCCCCeeEEEEEEcCCcc---------hHHHHHHHHhhhhc-Cccccccc-cCCCCeEEEEcCC
Confidence 99999999875443 2233333 466765310 01567888888766 88764321 1234789999986
Q ss_pred --CHHHHHHHHHHH
Q 012124 446 --SLTTLQAAVERI 457 (470)
Q Consensus 446 --~~~~i~~~l~~l 457 (470)
+++||+++++.|
T Consensus 385 ~~t~edid~~~~~L 398 (398)
T cd00613 385 TETKEELDALLEAL 398 (398)
T ss_pred CCCHHHHHHHHHhC
Confidence 899999988754
No 149
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=3.2e-27 Score=232.35 Aligned_cols=319 Identities=13% Similarity=0.159 Sum_probs=225.5
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCC
Q 012124 107 DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p 186 (470)
.+++.+.+++...... +. ..+.+..+.+.+.+.+..|.+.+...|++++|+++++..++..++.+||+|++.++
T Consensus 9 ~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~ 82 (355)
T TIGR03301 9 STSATVRDAMLVDWCH----WD--SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLIN 82 (355)
T ss_pred CCCHHHHHHhhhhccC----CC--HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECC
Confidence 3466777777663221 21 12234455555555555565432236888999999999999999888888776665
Q ss_pred CCCC--hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC--CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 012124 187 FWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 262 (470)
Q Consensus 187 ~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~ 262 (470)
.+.+ +...++..|.+++.++.+. ++.+|++.+++++++ +.+.+++++++||||...+ +++|+++|++| ++
T Consensus 83 ~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~-~~ 156 (355)
T TIGR03301 83 GAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH-GA 156 (355)
T ss_pred CchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc-CC
Confidence 5544 4567788999999999853 356899999999864 4556777889999999998 78999999999 99
Q ss_pred EEEEeccccccccCCCCcccccccCCCCCceEEEeccCccc-ccccceeeEEEcCHHHHHHHHHHh--------------
Q 012124 263 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ-------------- 327 (470)
Q Consensus 263 ~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~r~G~~~~~~~~~~~l~~~~-------------- 327 (470)
++|+|++++.. . ...++.. .+..++++|++|.+ |++| +||+++++++++.+....
T Consensus 157 ~livD~~~s~g---~-~~~~~~~----~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (355)
T TIGR03301 157 VLIVDAMSSFG---A-IPIDIEE----LDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYM 226 (355)
T ss_pred EEEEEeccccC---C-cccchhh----cCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHh
Confidence 99999877642 1 1122222 34568899999987 4445 799999999888765210
Q ss_pred ---hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC---CceEEEeeeccCccCC
Q 012124 328 ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGS 401 (470)
Q Consensus 328 ---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~ 401 (470)
....++++...+.++.++++.-. .+.+.++.+++++++++++.+.|+++ |+++..+ .+++++|+.+|...
T Consensus 227 ~~~~~~~~t~~~~~~~a~~~al~~~~-~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-- 302 (355)
T TIGR03301 227 EKTGKWRFTPPTHTVYAFAQALEELE-AEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDP-- 302 (355)
T ss_pred hhcCCCCCCCcHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCC--
Confidence 11234567777777666665310 01236777888899999999999887 7765433 34667888887520
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 402 ~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
..+..++.++|.++ ||.+.+|..+.. +++|+++.. +.++++++++.|+++
T Consensus 303 -------~~~~~~~~~~l~~~-gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 303 -------DFDFDDFYQELKER-GFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred -------cchHHHHHHHHHHC-CEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 01456788887765 999999876543 799999865 889999999999875
No 150
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=1.4e-27 Score=236.94 Aligned_cols=323 Identities=18% Similarity=0.146 Sum_probs=235.4
Q ss_pred ChHHHHHHHHHHHHcCC------CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc-----C
Q 012124 108 TPVLIAEAGINAIREGF------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-----S 176 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~-----~ 176 (470)
+++.+++++.+.+.+.. +.| +..+...+++++++++.. .|. .++++|++|+|+++++.++++++. +
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~ 87 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEILK 87 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhccc
Confidence 46778888888776421 223 235667888988888753 342 267899999999999999998762 4
Q ss_pred C-CCeEEEcCCCCCChHHH---HHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHH
Q 012124 177 P-GDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 252 (470)
Q Consensus 177 ~-gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l 252 (470)
+ +|+|++..+.|+.+... ++..|++++.+|++.+ +.+|++.++++++++++++++++|+||||..++ +++|
T Consensus 88 ~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~--g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I 162 (382)
T TIGR03403 88 GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ--GTITAEQVREAITEKTALVSVMWANNETGMIFP---IKEI 162 (382)
T ss_pred CCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC--CCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHHH
Confidence 5 47899988777766544 5668999999998743 458999999999989999999999999999999 6788
Q ss_pred HHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHH--HHH---HHHh
Q 012124 253 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--AAC---NKIQ 327 (470)
Q Consensus 253 ~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~--~~l---~~~~ 327 (470)
.++|+++ |+++|+|+++.. +..+..+.. .+-.+++.|++|.+|.+| +|+++..+... ..+ ....
T Consensus 163 ~~la~~~-g~~~ivD~a~~~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~ 231 (382)
T TIGR03403 163 GEICKER-GVLFHTDAVQAI----GKIPVDVQK----AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMG 231 (382)
T ss_pred HHHHHHc-CCEEEEechhhc----CCCccCccc----cCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCC
Confidence 9999999 999999999763 211112221 234488899999888667 57776544321 111 0011
Q ss_pred hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc---eEEEeeeccCccCCccc
Q 012124 328 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAE 404 (470)
Q Consensus 328 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~ 404 (470)
.....+++...+.++..+++. ..++++..++++++.++++.+.|++++|+.+..+.. ..++.+.++..
T Consensus 232 ~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 302 (382)
T TIGR03403 232 GRRSGTLNVPYIVAMGEAMRL---ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV------ 302 (382)
T ss_pred CcccCCcChHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC------
Confidence 112345777788788888764 355678888899999999999999888888876531 22345566542
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------------C-----CCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 405 GFGKIENSESLCRYLLDKAQVALVPGDAFG--------------D-----DTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 405 ~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--------------~-----~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
+..++...|. +.||.+..|+.+. . .+.+|+|++. +++|++++++.|++++++
T Consensus 303 ------~~~~~~~~L~-~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 303 ------EGEAMLWDLN-KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred ------CHHHHHHhhc-cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 6677777765 4599999876542 1 2579999997 899999999999999877
Q ss_pred hC
Q 012124 464 LR 465 (470)
Q Consensus 464 ~~ 465 (470)
++
T Consensus 376 ~~ 377 (382)
T TIGR03403 376 LR 377 (382)
T ss_pred HH
Confidence 64
No 151
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=2.7e-27 Score=233.33 Aligned_cols=302 Identities=13% Similarity=0.115 Sum_probs=220.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--HHHHHHcCCEEEEecCcCC
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRIS 210 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~ 210 (470)
..+..+.+.+.+.+.+|.+-+.+.|++|+|++++++.++..+..+||.+++..+++++. ...++..|++++.++++.
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 44455555555555566532235799999999999999999988999888877766655 366788999999999864
Q ss_pred CCCccCHHhHhhhccC--CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 211 ENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 211 ~~~~~d~~~l~~~l~~--~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
++.+|++.+++++++ +++++.+++++||||..+| +++|+++|+++ ++++|+|++++. + ..+.++..+
T Consensus 112 -~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~-g~~livD~~~~~---g-~~~~~~~~~-- 180 (363)
T TIGR02326 112 -VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH-GKVTIVDAMSSF---G-GIPIDIAEL-- 180 (363)
T ss_pred -CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc-CCEEEEEccccc---c-Ccccchhhc--
Confidence 345899999999864 4567788899999999999 78999999999 999999998763 2 222333333
Q ss_pred CCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh------------------hhccCCCChHHHHHHHHHHhcCC
Q 012124 289 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------------SQFTSGASSISQKAGVAALGLGY 350 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~------------------~~~~~~~~~~~q~a~~~~l~~~~ 350 (470)
+..++++|++|.++ ++.++||++++++.++.+.... ....+.++.+.+.++.++++.-.
T Consensus 181 --~~D~~~~s~~K~l~-~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~ 257 (363)
T TIGR02326 181 --HIDYLISSANKCIQ-GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELE 257 (363)
T ss_pred --CccEEEecCccccc-cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 34488999999883 3334799999998877643100 01233567778888776665310
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC---CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEE
Q 012124 351 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 427 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v 427 (470)
. ...+++++++++++++++.+.|+++ |+.+..+ .++...|+.+|+... .+..++.+.|.++ ||.+
T Consensus 258 ~-~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~L~~~-gi~v 325 (363)
T TIGR02326 258 K-EGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD---------YRFADFYQRLKEQ-GFVI 325 (363)
T ss_pred H-hhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC---------CCHHHHHHHHHHC-CEEE
Confidence 0 1236678899999999999999887 7766433 355667788775200 1567788888655 9999
Q ss_pred ECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 428 VPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 428 ~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
.||..+ ..++||+++.. +.++++++++.|++++.
T Consensus 326 ~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 326 YPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred ECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 999766 35789999754 89999999999988763
No 152
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=3e-27 Score=234.12 Aligned_cols=333 Identities=16% Similarity=0.177 Sum_probs=233.4
Q ss_pred cCCCeEEccCCCCC--CC-ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++||.+|... +. .++.+.+++.+++.+... . ......+++..+++++.+..+ .+.+++++++++++.
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~ 100 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH-V-SNLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANE 100 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-c-ccccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHH
Confidence 57788999998632 22 478899999999876322 2 233557899999999986433 258999999999999
Q ss_pred HHHHHhc-CCC-CeEEEcCCCCCChHHH-HHHcCCEEE---EecCcCCCCCc--cCHHhHhhhccCCceEEEEcCCCCCc
Q 012124 169 QAVLAVC-SPG-DEVIIPAPFWVSYPEM-ARIADATPV---ILPTRISENFL--LDPKVLESKLTEKSRLLILCSPSNPT 240 (470)
Q Consensus 169 ~~~~~l~-~~g-d~Vlv~~p~y~~~~~~-~~~~g~~~~---~v~~~~~~~~~--~d~~~l~~~l~~~~~~i~l~~p~nPt 240 (470)
.+++... .+| +.|++.+++|++.... ....+.... ..|..++..+. .|++.+++.+.+++++|++..+++++
T Consensus 101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~ 180 (377)
T PRK02936 101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEG 180 (377)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCC
Confidence 9998542 244 6799999999865432 222232111 11111100000 27899999998889999998889999
Q ss_pred ccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHH
Q 012124 241 GSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 319 (470)
Q Consensus 241 G~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~ 319 (470)
|.. .+.+.+++|.++|++| |+++|+||+|.++.+.+.. ..+....- ... +.+|||.++ +|+|+||+++++++
T Consensus 181 G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~-~~~~~~~~-~~d---i~t~sK~l~-~G~~ig~v~~~~~~ 253 (377)
T PRK02936 181 GVIPADPAFLQEVQTLCKKF-GALLIIDEVQTGIGRTGTL-FAYEQFGL-DPD---IVTVAKGLG-NGIPVGAMIGKKEL 253 (377)
T ss_pred CCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchh-hHHHhhCC-CCc---EEEEccccc-CCCccEEEEEcHHH
Confidence 876 5889999999999999 9999999999987665432 12212211 112 347999998 99999999999999
Q ss_pred HHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCCeecCCCceEEEeeec
Q 012124 320 VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDF 395 (470)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~g~~~~~~~ 395 (470)
++.+.......+++.+++.|.++.++|+.... ++++ +.++++.+.+.+.|++ ++.+.... ..|+++|+++
T Consensus 254 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i~~ 327 (377)
T PRK02936 254 GTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ-PSFL----EEVQEKGEYFLQKLQEELEHLECVKNIR-GKGLMIGIEC 327 (377)
T ss_pred HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHH----HHHHHHHHHHHHHHHHHHhhCCcEEeEe-ecceEEEEEe
Confidence 98886555556677899999999999975311 2333 4445555555555554 33322222 3467899998
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCHHHHHHHHHHHHHHH
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASLTTLQAAVERIKKGL 461 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~--~~~~~~i~~~l~~l~~~l 461 (470)
++ +...+.+.|.+ .||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 328 ~~-------------~~~~~~~~l~~-~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 328 TE-------------EVAPVIEQLRE-EGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred cc-------------hHHHHHHHHHH-CCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 64 35667776655 499998853 47899996 349999999999998753
No 153
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=3.4e-27 Score=235.29 Aligned_cols=332 Identities=12% Similarity=0.166 Sum_probs=235.0
Q ss_pred cCCCeEEccCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~-~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++||..|. ..+. .++.+.+++.+++.+.. .+... ...+....+++.+.+..+ .+.+++++++++|..
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~~~~~-~~~~~~~~l~~~l~~~~~----~~~~~~~~sGseA~e 111 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLW-HISNV-FTNEPALRLAKKLIDATF----AERVFFANSGAEANE 111 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcC-cccCc-cCCHHHHHHHHHHHhhCC----CCEEEEeCchHHHHH
Confidence 567889998873 2333 37899999999887522 11111 112334466666655332 369999999999999
Q ss_pred HHHHHhc--------CCCCeEEEcCCCCCChHHHH-HHcC------------CEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 169 QAVLAVC--------SPGDEVIIPAPFWVSYPEMA-RIAD------------ATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 169 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~-~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
.+++... ...+.|+..+-+|++..... ...| .+++.++. .|++.+++.+.++
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 184 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC
Confidence 9988642 12357888888888865422 2111 11222222 2889999999878
Q ss_pred ceEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCcccc
Q 012124 228 SRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFA 304 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~--s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~~~ 304 (470)
+++|+++ |.||+|.++ +.+.+++|+++|++| |+++|+||+|.++.+.+.... ....+.+ + +.||||.++
T Consensus 185 ~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~~~~~~~~~p--d----i~s~sK~l~ 256 (403)
T PRK05093 185 TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQH-NALLIFDEVQTGMGRTGDLFAYMHYGVTP--D----ILTSAKALG 256 (403)
T ss_pred eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccchhhhhcCCCC--C----EEEeccccc
Confidence 8888777 777777654 899999999999999 999999999998766654211 1122222 2 678999998
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---CCe
Q 012124 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GVK 381 (470)
Q Consensus 305 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~ 381 (470)
+|+|+||+++++++++.+.......+++.+++.|.++.++|+.- . ..+..+.++++++++.+.|+++. ++.
T Consensus 257 -~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~---~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 330 (403)
T PRK05093 257 -GGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDII---N--TPEVLEGVKARRQRFVDGLQKINQKYGVF 330 (403)
T ss_pred -CCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hccHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 99999999999999998876555566788999999999987641 1 13456788889999999888751 222
Q ss_pred ecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012124 382 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 382 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
...+..|+++|+.++... ..+..++++.|+++ ||.+.|+. .+++|++++. +++++++++++|++
T Consensus 331 ~~~~~~G~~~~~~l~~~~---------~~~~~~~~~~l~~~-Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 331 SEIRGMGLLIGAELKPQY---------KGRARDFLNAAAEE-GVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred EeEeeCceEEEEEecCcc---------hhHHHHHHHHHHHC-CeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 234456888999986421 01456888888876 89998742 4789997554 89999999999999
Q ss_pred HHHhh
Q 012124 460 GLLTL 464 (470)
Q Consensus 460 ~l~~~ 464 (470)
+++++
T Consensus 397 ~l~~~ 401 (403)
T PRK05093 397 AVAKV 401 (403)
T ss_pred HHHHh
Confidence 98764
No 154
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.96 E-value=1.8e-27 Score=238.97 Aligned_cols=347 Identities=17% Similarity=0.207 Sum_probs=239.0
Q ss_pred cCCCeEEccCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~---~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|..... .++.+.+++.+++.+....+.+..+..+|+++|++++. ..++|++++|++++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGseA~e 118 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTEATM 118 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHHHHH
Confidence 6788999999986542 37999999999998754433356688899999998752 2368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH---cCCEEEEecCcCC-------CCC---ccCHHhHhhhcc---CCceE
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRIS-------ENF---LLDPKVLESKLT---EKSRL 230 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~-------~~~---~~d~~~l~~~l~---~~~~~ 230 (470)
.+++... ...++|+..+++|+++...+.. .|......+..+. +.. ..|++.+++.++ +++++
T Consensus 119 ~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa 198 (423)
T TIGR00713 119 SAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAG 198 (423)
T ss_pred HHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEE
Confidence 9888642 2458999999999998654332 1111111111100 000 027899998886 56788
Q ss_pred EEE-cCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccc
Q 012124 231 LIL-CSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 231 i~l-~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
|++ +.++| +|.+++ ++.+++|.++|++| |+++|+||+|.++.++.........+.+ + +.+|||.++ +|+
T Consensus 199 vi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~r~g~~~~~~~~~~~p--D----i~t~sK~l~-~G~ 269 (423)
T TIGR00713 199 VIVEPVAGN-MGVVPPKPEFLAGLRALTEEY-GSLLIFDEVMTGFRVALGGAQEYFGVEP--D----LTTLGKIIG-GGL 269 (423)
T ss_pred EEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh-CCEEEEEccccccccCcchhHHHhCCCc--c----hhhhhhhhc-CCC
Confidence 887 57788 788877 68999999999999 9999999999988654221122222222 2 347999998 999
Q ss_pred eeeEEEcCHHHHHHHHH---HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeec-C
Q 012124 309 RLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-E 384 (470)
Q Consensus 309 r~G~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~ 384 (470)
|+||+++++++++.+.. .....+++.+++.|.++.+.|+.-.. ..+.+++++..+..++.+.+.+++. ++... .
T Consensus 270 pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~ 347 (423)
T TIGR00713 270 PVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE-EGVYTELDELAKRLAEGLSEVLEDT-GIPHTVN 347 (423)
T ss_pred ceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence 99999999999988863 22345678899999999888874221 3467778888888888888888776 44332 2
Q ss_pred CCceE-EEeeeccCccCCcccCCCCCCC---HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 385 PQGAF-YLFIDFSTYYGSEAEGFGKIEN---SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 385 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
..+++ .+++..+.... ... .+..+ ...+++.|+++ ||.+.++ .| +.+|+++..+++++++++++|+++
T Consensus 348 ~~g~~~~v~~~~~~~~~--~~~-~~~~~~~~~~~~~~~l~~~-Gv~v~~~-~~---~~~~l~~~~t~~~i~~~~~~l~~~ 419 (423)
T TIGR00713 348 RVGSMFSLFFTEEEVTN--YAD-AKKSDTELFAKFFHEMLDK-GVFLPPS-QF---EACFLSAAHTEEDIENTIEAAEEV 419 (423)
T ss_pred eeccEEEEEEecCCCCC--hhh-hhcccHHHHHHHHHHHHHC-CeEEecC-Cc---cceeeECCCCHHHHHHHHHHHHHH
Confidence 23333 33343221100 000 00001 23577778764 9988754 23 468998888999999999999999
Q ss_pred HHhh
Q 012124 461 LLTL 464 (470)
Q Consensus 461 l~~~ 464 (470)
++++
T Consensus 420 l~~~ 423 (423)
T TIGR00713 420 FAEL 423 (423)
T ss_pred HhhC
Confidence 8753
No 155
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.7e-26 Score=230.57 Aligned_cols=336 Identities=19% Similarity=0.205 Sum_probs=234.5
Q ss_pred CCCeEEccCCC-CCCCChHHHHHHHHHHHHcCCCC---CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 93 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 93 ~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~---y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
++++++|++++ ..+..++++++++.+++.+.... +....|..+..+.+++.+.+..|. +..+++++| .++..
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~---~~~~~~~SG-~~An~ 119 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK---EAALLFTSG-YVSNW 119 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC---CcEEEeCCc-HHHHH
Confidence 35678888886 55666899999999998763221 112224344445555555544452 334555555 56888
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCCCccc
Q 012124 169 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGS 242 (470)
Q Consensus 169 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~nPtG~ 242 (470)
.++..+.. +||.|+.....|......++..|.+++.++. .|++.+++.++ +++++|++++++||+|.
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~ 192 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFESVYSMDGD 192 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCc
Confidence 88887655 7888877777777777778888888877764 26666666553 35778889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC-CCceEEEeccCcccccccceeeEEEcCHHHHH
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 321 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~ 321 (470)
+.+ +++|.++|+++ ++++|+||+|+...++..+. .+....+. .+.+|+++||||.+|++| ||+++++++++
T Consensus 193 ~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~G~-g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~ 264 (406)
T PRK13393 193 IAP---IAEICDVAEKH-GAMTYLDEVHAVGLYGPRGG-GIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCD 264 (406)
T ss_pred hhC---HHHHHHHHHHc-CCEEEEECCccccccCCCCC-chhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHH
Confidence 999 88899999999 99999999998544443221 11121111 234688899999998777 99999999999
Q ss_pred HHHHHhhhc--cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCcc
Q 012124 322 ACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 399 (470)
Q Consensus 322 ~l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~ 399 (470)
.+......+ +.+.++..+.++.++|+.- ++. ...+.+++++++++.+.|+++ |+.+..+.+.+ +.+.+++..
T Consensus 265 ~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-~~v~~~~~~ 338 (406)
T PRK13393 265 FIRSFASGFIFTTSLPPAVAAGALASVRHL---KAS-SAERERHQDRVARLRARLDKA-GIPHLPNPSHI-VPVMVGDPV 338 (406)
T ss_pred HHHHhCcCceecCccCHHHHHHHHHHHHHH---hhC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCe-EEEEeCCHH
Confidence 887765432 4456777788888888741 222 223456778888999999876 77666666665 444443211
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
+..++.++|++++||.+.++..... .+++|++++. ++++++++++.|+++++++
T Consensus 339 -----------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 339 -----------LCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred -----------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 4567888888767999988654332 2689999885 9999999999999988764
No 156
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=4e-27 Score=233.13 Aligned_cols=314 Identities=17% Similarity=0.198 Sum_probs=225.2
Q ss_pred ChHHHHHHHHHHHHcCCC--CCCC-------CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC--
Q 012124 108 TPVLIAEAGINAIREGFT--RYTP-------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-- 176 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~--~y~~-------~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~-- 176 (470)
+|+.+.+++.+.+..... ..+. .....++|+.+++++ |.+ +++++++|+|+++++.+++.++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 11 KPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----NAP-SPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 367788888877754211 0001 122345666776665 432 367999999999999999999887
Q ss_pred -CCCeEEEcCCCCCChH----HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 177 -PGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 177 -~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
+||+|++++++|++.. ...+..|++++.++++ .++.+|++.+++.+++++++|++++++||||..++ +++
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~~~ 160 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---VKE 160 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---HHH
Confidence 8999999999998853 3445789999999986 34559999999999889999999999999999999 778
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhh--
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ-- 329 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~-- 329 (470)
|.++|+++ +++||+|++|+.... ..++.. .+..+++.|++|.++ + .++||+++++++++.+......
T Consensus 161 i~~~~~~~-~~~li~D~a~~~~~~----~~~~~~----~~~d~~~~s~~K~~~-~-~g~g~~~~~~~~~~~~~~~~~g~~ 229 (373)
T cd06453 161 IGEIAHEA-GVPVLVDGAQSAGHM----PVDVQD----LGCDFLAFSGHKMLG-P-TGIGVLYGKEELLEEMPPYGGGGE 229 (373)
T ss_pred HHHHHHHc-CCEEEEEhhhhcCce----eeeccc----cCCCEEEeccccccC-C-CCcEEEEEchHHhhcCCCeecCCC
Confidence 99999999 999999999874211 112221 233477788999997 4 6689999999888876543210
Q ss_pred -------------------ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC--ce
Q 012124 330 -------------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GA 388 (470)
Q Consensus 330 -------------------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~g 388 (470)
....++.....++.++++.- .+..+++++++.++.++++.+.|++++++++..+. .+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 307 (373)
T cd06453 230 MIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYL--EKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRA 307 (373)
T ss_pred ccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccC
Confidence 11134444444444444421 12235677788888899999999988888775322 23
Q ss_pred EEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEEEEeec--CHHHHHHHHHHH
Q 012124 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYAA--SLTTLQAAVERI 457 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f--------~~~~~iRls~~~--~~~~i~~~l~~l 457 (470)
.++++.++.. +..++.+.|.+ +||.+.+|..+ +.++++|++++. ++++++++++.|
T Consensus 308 ~~~~~~~~~~------------~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 308 GVVSFNLEGI------------HPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CeEEEEECCc------------CHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 3466677643 67788888765 59999887653 235799999996 889999988754
No 157
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=8.5e-27 Score=235.88 Aligned_cols=341 Identities=19% Similarity=0.253 Sum_probs=239.9
Q ss_pred HHHHHHHHHHhcC----CCeEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCC--cCcHHHHHHHH---HHHHHHcCCC
Q 012124 81 AITDQATALAQAG----VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAIC---HKLKEENGLS 151 (470)
Q Consensus 81 ~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~--~g~~~lr~~ia---~~l~~~~g~~ 151 (470)
++.....+....+ ...+.++.|.++...|..+.+..... .....|.+. .-...+++++. +++.+.+|.
T Consensus 51 ~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~--~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~- 127 (447)
T PRK00451 51 ELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRS--EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGM- 127 (447)
T ss_pred HHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhch--hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC-
Confidence 4444444444333 15678889999988887776655433 222335441 11233666666 445777785
Q ss_pred CCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 152 YTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 152 ~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
+.+++++|+|+++++..++.++. .+||+|++.++.|+.+...++. .|++++.++++++ .+|++.+++++++
T Consensus 128 -~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~---~~d~~~l~~~i~~ 203 (447)
T PRK00451 128 -DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG---VTDLEALEAAVDD 203 (447)
T ss_pred -CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC---CCCHHHHHHhcCC
Confidence 55689999999999999888874 7999999999999998877654 6999999998643 5899999999998
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEE--eccccccccCCCCcccccccCCCCCceEEEe---ccCc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS--DEIYEHIIYAPATHTSFASLPGMWERTLTVN---GFSK 301 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~--Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~---S~sK 301 (470)
++++|++++| ||||.+.+ +++|.++|+++ |+++|+ |..... . ... ....+..++++ +|||
T Consensus 204 ~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~-~~~~iv~~d~~~~g-----~-~~~----~~~~~~D~~~~s~~k~~~ 268 (447)
T PRK00451 204 DTAAVVVQYP-NFFGVIED---LEEIAEIAHAG-GALFIVGVDPVSLG-----L-LKP----PGEYGADIVVGEGQPLGI 268 (447)
T ss_pred CeEEEEEECC-CCCCeeCC---HHHHHHHHHHC-CCEEEEEcChHHhc-----c-CCC----cccCCCCEEEECCCcCCC
Confidence 9999999999 89999988 88999999999 999887 332211 0 001 11234456665 7888
Q ss_pred ccccccceeeEEEcCHHHHHHH----------------------------HHHhhhccCCCChHHH-HHHHHHHhcCCCC
Q 012124 302 AFAMTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQ-KAGVAALGLGYAG 352 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q-~a~~~~l~~~~~~ 352 (470)
.+++.|+++||+++++++++.+ +..+...+.+.+...| .++..++... .
T Consensus 269 ~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~ 346 (447)
T PRK00451 269 PLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLL--G 346 (447)
T ss_pred CCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHH--C
Confidence 8878899999999999888773 1112222333333334 3333344321 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEe--eeccCccCCcccCCCCCCCHHHHHHHHHHcCCEE-EEC
Q 012124 353 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA-LVP 429 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~-v~p 429 (470)
+..++++++++.++++++.+.|++++|+++. .+++|.+ ++++. +..+++++|.++ ||. ..+
T Consensus 347 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~~-------------~~~~~~~~L~~~-gi~~~~~ 410 (447)
T PRK00451 347 PEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLPK-------------PAEEVNEALLEK-GILGGYD 410 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecCC-------------CHHHHHHHHHhc-CCCCCcc
Confidence 5678999999999999999999998788775 3344433 45431 567899999877 554 355
Q ss_pred CCCCCC--CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 430 GDAFGD--DTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 430 g~~f~~--~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
+..|+. .+++|++++. ++++++++++.|++++
T Consensus 411 ~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 411 LGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 665542 4689999974 8999999999998764
No 158
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=1.1e-26 Score=229.38 Aligned_cols=302 Identities=16% Similarity=0.168 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCcCCCC
Q 012124 135 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISEN 212 (470)
Q Consensus 135 ~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~ 212 (470)
+..+.+.+.+.+..|.+-+.+.|++++|+++++..++..+..+||.|++.+++|++.. ..++..|++++.++.+. +
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~--~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE--D 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC--C
Confidence 3444444444444564323356889999999999999999999999999988887763 67788999999999863 3
Q ss_pred CccCHHhHhhhccC--CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCC
Q 012124 213 FLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 290 (470)
Q Consensus 213 ~~~d~~~l~~~l~~--~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
+.+|++.+++++++ +++++++++++||||...| +++|.++|+++ ++++|+|+++. ++. ...++..+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~-~~~livDa~~~---~g~-~~~~~~~~---- 182 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH-GKRLIVDAMSS---FGA-IPIDIAEL---- 182 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc-CCEEEEEcccc---cCC-cccccccc----
Confidence 45899999998854 4667889999999999999 78899999999 99999997654 222 22233322
Q ss_pred CceEEEeccCccc-ccccceeeEEEcCHHHHHHHHHHhh-----------------hccCCCChHHHHHHHHHHhcCCCC
Q 012124 291 ERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQS-----------------QFTSGASSISQKAGVAALGLGYAG 352 (470)
Q Consensus 291 ~~~i~i~S~sK~~-~~~G~r~G~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~q~a~~~~l~~~~~~ 352 (470)
+..++++|++|.+ |.+| +||+++++++++.+..... ...++++...+.++.++++.-. .
T Consensus 183 ~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~-~ 259 (368)
T PRK13479 183 GIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELE-E 259 (368)
T ss_pred CceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHH-H
Confidence 3347788999976 5566 7999999998887654321 1113456666556655554310 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC---ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012124 353 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 429 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p 429 (470)
..++++..++++++++.+.+.|+++ |+.+..+. .+..+.+.++... ..+..++.++|.++ ||.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~L~~~-gi~v~~ 328 (368)
T PRK13479 260 EGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADP---------AYDFKEFYERLKEQ-GFVIYP 328 (368)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCC---------CcCHHHHHHHHHHC-CEEEec
Confidence 2245677788999999999999888 77654331 1222222333210 01567888888766 999999
Q ss_pred CCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 430 GDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 430 g~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
|..+ ..+++|++... ++++++.+++.|+++++++.
T Consensus 329 g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 329 GKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8654 35689999744 99999999999999998764
No 159
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.96 E-value=1.9e-27 Score=232.91 Aligned_cols=309 Identities=17% Similarity=0.176 Sum_probs=229.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC------------
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS------------ 176 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~------------ 176 (470)
+..+.+.+...+......|....+..++++++++++.+.+|.+..++++++|+|+++++.+++.++..
T Consensus 12 ~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~ 91 (345)
T cd06450 12 PALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR 91 (345)
T ss_pred HHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence 34455666666655556688888999999999999999889764566899999999999999988742
Q ss_pred CC--CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcccCCCHHH
Q 012124 177 PG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNL 248 (470)
Q Consensus 177 ~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~~~s~~~ 248 (470)
++ +.|++++++|..+...++..|.+++.++++++ +.+|++.|++++++ ++++++++.++||||...+
T Consensus 92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~--- 166 (345)
T cd06450 92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP--- 166 (345)
T ss_pred ccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---
Confidence 33 47888999999998888888999999998754 36999999999976 7888888999999999977
Q ss_pred HHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh
Q 012124 249 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 328 (470)
Q Consensus 249 ~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~ 328 (470)
+++|+++|+++ |+++++|++|+.+.+........ .....+-..+..|++|.++ ++.++|+++.+
T Consensus 167 ~~~i~~~~~~~-~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~------------ 230 (345)
T cd06450 167 LEEIADLAEKY-DLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKYGL-VPLGCSAVLVR------------ 230 (345)
T ss_pred HHHHHHHHHHh-CCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHhhC-CCcchHHHHHH------------
Confidence 88999999999 99999999998766432111111 1111123356779999875 77788988655
Q ss_pred hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC-CCceEEEeeeccCccCCcccCCC
Q 012124 329 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFG 407 (470)
Q Consensus 329 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 407 (470)
.+.+.++...+. ...+++++++..+.++++.+.|.+++++.+.. +..+++.| .++....
T Consensus 231 -------~~~~~~~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f-~~~~~~~------- 290 (345)
T cd06450 231 -------ALKLWATLRRFG-----RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF-RLKPSVK------- 290 (345)
T ss_pred -------HHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE-EECCcch-------
Confidence 444445555553 45577788888889999999999988887654 55666444 5543100
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHH
Q 012124 408 KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKK 459 (470)
Q Consensus 408 ~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~ 459 (470)
...+..++.+.|.++ |+.+.++..+..++++|++++. +.++++++++.|++
T Consensus 291 ~~~~~~~i~~~L~~~-g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNER-GGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhHHHHHHHHHHHhc-CCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 000456788888766 5555565555556799999984 78999999998865
No 160
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=3.9e-26 Score=227.24 Aligned_cols=224 Identities=14% Similarity=0.206 Sum_probs=177.8
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCC
Q 012124 125 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 200 (470)
Q Consensus 125 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~ 200 (470)
.+| +.+-...|++.|+++. ..+++++++|+++++..++.+++++||.|++++|+|+++...+ +..|+
T Consensus 78 ~R~-~~Pt~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRF-NHPNSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCC-CCcCHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 445 3445678999999985 2357888999999999999999999999999999999997664 56799
Q ss_pred EEEEecCcCCCCCccCHHhHhhhcc-----CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHh---CCCEEEEEeccccc
Q 012124 201 TPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK---HPRLLVLSDEIYEH 272 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~-----~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~---~~~~~iI~Dd~~~~ 272 (470)
+++.++. + .|++.+++++. +++++|++++|+||||.+++.+++.+|++.|++ + +++||+||+|..
T Consensus 149 ~~v~~~~---~---~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~-~~~vvvDety~~ 221 (427)
T PRK07049 149 GAVGFAD---G---LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGH-RPIIACDNTLLG 221 (427)
T ss_pred EEEEEeC---C---CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccC-CCEEEEECCccc
Confidence 8777762 2 46777776653 478999999999999999999988888888654 7 899999999875
Q ss_pred cccCCCCcccccccCCCCCceEEEeccCcccc-cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCC
Q 012124 273 IIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 351 (470)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~ 351 (470)
..+. .++ . .+..|++.||||.++ .+|+|+||+++++++++.+...+..++.+.+++.|.++...|+.
T Consensus 222 ~~~~----~pl---~--~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t--- 289 (427)
T PRK07049 222 PVFQ----KPL---E--HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET--- 289 (427)
T ss_pred cccC----Ccc---c--cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh---
Confidence 3321 122 1 245688999999998 69999999999999999999888888888899988877666642
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 352 GGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
+....++..++++.+.+.|++.|++
T Consensus 290 ----l~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 290 ----LVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3334455588899999999988765
No 161
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=2e-26 Score=228.36 Aligned_cols=327 Identities=14% Similarity=0.150 Sum_probs=230.9
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHcCC--CC---CCC----CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHH
Q 012124 99 LAAGEPDFDTPVLIAEAGINAIREGF--TR---YTP----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 169 (470)
Q Consensus 99 l~~g~~~~~~~~~~~~a~~~~~~~~~--~~---y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~ 169 (470)
|..+...+++|+.+.+++.+.+.... .+ |.. ..+..++|+.+++++ |.+ .+++|++|+|+++++..
T Consensus 3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~al~~ 77 (376)
T TIGR01977 3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAP-SSAHVVFTNNATTALNI 77 (376)
T ss_pred ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCCHHHHHHH
Confidence 44555556678888988888876532 12 321 144567777777776 432 34589999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCC
Q 012124 170 AVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 245 (470)
Q Consensus 170 ~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s 245 (470)
++.+++++||+|++..++|+.+.. ..+..|.+++.++.+. ++.+|++.++++++++++++++++|+||||..++
T Consensus 78 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 155 (376)
T TIGR01977 78 ALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP 155 (376)
T ss_pred HHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC
Confidence 999999999999999999987653 3455699999999864 3458999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHH-HHHHH
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACN 324 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~-~~~l~ 324 (470)
+++|.++|+++ |+++|+|++++.... ...+ .. .+-.+++.|++|.++.|. .+|.++..++. ++.+.
T Consensus 156 ---~~~i~~l~~~~-~~~livD~a~~~g~~----~~~~---~~-~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~ 222 (376)
T TIGR01977 156 ---IEEIGELAQEN-GIFFILDAAQTAGVI----PIDM---TE-LAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLK 222 (376)
T ss_pred ---HHHHHHHHHHc-CCEEEEEhhhccCcc----CCCc---hh-cCCCEEEecccccccCCC-CceEEEEcCCcCcCcee
Confidence 77889999999 999999999975221 1111 11 245588999999885332 35666544432 11111
Q ss_pred H----H------------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC--
Q 012124 325 K----I------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-- 386 (470)
Q Consensus 325 ~----~------------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-- 386 (470)
. . .+....+++.....++.++++.- .+...+.++++.++..+.+.+.|.+.+|+++..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 300 (376)
T TIGR01977 223 SGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFI--EKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADP 300 (376)
T ss_pred cCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc
Confidence 0 0 00111234444444555555431 12234667788888899999999888788776431
Q ss_pred --ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----------CCCcEEEEeec--CHHHHHH
Q 012124 387 --GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----------DDTCIRISYAA--SLTTLQA 452 (470)
Q Consensus 387 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~----------~~~~iRls~~~--~~~~i~~ 452 (470)
.+..+++.+++. +..++.+.|.+++||.+.+|..+. ..+.||++++. ++++++.
T Consensus 301 ~~~~~~v~~~~~~~------------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~ 368 (376)
T TIGR01977 301 ANRVGVVSFTVEGI------------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEK 368 (376)
T ss_pred cccCCeEEEEECCC------------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHH
Confidence 233467777643 677888888776699999987653 24789999987 8999999
Q ss_pred HHHHHHH
Q 012124 453 AVERIKK 459 (470)
Q Consensus 453 ~l~~l~~ 459 (470)
++++|++
T Consensus 369 ~~~~l~~ 375 (376)
T TIGR01977 369 LLEALSE 375 (376)
T ss_pred HHHHHhh
Confidence 9999875
No 162
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.96 E-value=2e-26 Score=229.23 Aligned_cols=327 Identities=15% Similarity=0.173 Sum_probs=229.7
Q ss_pred cCCCeEEccCCCCCC--CC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDF--DT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~--~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.... .. +|.+.+++.+++.+..... . .-..+....+++.+....+ .+.+++++++++|+.
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~-~-~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGseA~e 111 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS-R-AFHSDQLGPWYEKVAKLTG----KDMVLPMNTGAEAVE 111 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc-c-ccCCHHHHHHHHHHHhcCC----CCeEEEcCChHHHHH
Confidence 677899998886433 33 7899999999887532211 1 1122344555555554332 368999999999999
Q ss_pred HHHHHhcC---------CC-CeEEEcCCCCCChHH-HHHHcCCE------------EEEecCcCCCCCccCHHhHhhhcc
Q 012124 169 QAVLAVCS---------PG-DEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 169 ~~~~~l~~---------~g-d~Vlv~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+++.... +| ++|+..+-+|++... .+...+.. +..++. .|++.+++.++
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~ 184 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAAIT 184 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHhcc
Confidence 98887631 44 678888888887653 33333311 112221 27899999998
Q ss_pred CCceEEEEcCCCCCcccCCCH-HHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccc
Q 012124 226 EKSRLLILCSPSNPTGSVYPK-NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s~-~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~ 304 (470)
+++++|++++++||||..++. +.+++|.++|++| |+++|.||+|.++...+... .. ... +...-+.+|||.+|
T Consensus 185 ~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~~-~~-~~~---~~~pdi~~~sK~lg 258 (396)
T PRK04073 185 PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE-NVLFIADEIQTGLGRTGKLF-AC-DWD---NVTPDMYILGKALG 258 (396)
T ss_pred cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhCCCcCcHHH-Hh-hhc---CCCCCEEEeccccc
Confidence 889988888899999998875 4699999999999 99999999999865443211 11 111 11112446899999
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC--CCCee
Q 012124 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL--EGVKM 382 (470)
Q Consensus 305 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g~~~ 382 (470)
.+|+|+||+++++++++.+.......+++.+++.|.++.+.|+.. ++ ..+.+..+++++++.+.|+++ +++..
T Consensus 259 ~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~ 333 (396)
T PRK04073 259 GGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVL---EE--EKLPERSLELGEYFKEQLKEIDNPMIKE 333 (396)
T ss_pred CCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 778999999999999998865555567788999999999988741 11 234455566788888888775 23333
Q ss_pred cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHH
Q 012124 383 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKG 460 (470)
Q Consensus 383 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~ 460 (470)
..+. |.+++++++. +..+++++|+++ ||.+.+. .+++||+++. .+++++++++++|+++
T Consensus 334 ~~~~-g~~~~~~~~~-------------~~~~~~~~l~~~-Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 334 VRGR-GLFIGVELNE-------------PARPYCEALKEE-GLLCKET----HETVIRFAPPLVITKEELDWAFEKIKAV 394 (396)
T ss_pred eecc-eEEEEEEecc-------------hHHHHHHHHHHC-CeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHH
Confidence 3334 5668888763 567888888765 9998763 2468999964 4999999999999987
Q ss_pred H
Q 012124 461 L 461 (470)
Q Consensus 461 l 461 (470)
+
T Consensus 395 l 395 (396)
T PRK04073 395 L 395 (396)
T ss_pred h
Confidence 5
No 163
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=3.7e-26 Score=226.53 Aligned_cols=321 Identities=15% Similarity=0.142 Sum_probs=224.9
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcC-----cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc---CCCC
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAG-----TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC---SPGD 179 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g-----~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~---~~gd 179 (470)
+|+.+.+++.+.+.. ...++.... ..+..+.+.+.+.+.+| +++++|++|+|+++++..++..+. .+||
T Consensus 11 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~ 87 (379)
T TIGR03402 11 VDPEVLEAMLPYFTE-YFGNPSSMHSFGGEVGKAVEEAREQVAKLLG--AEPDEIIFTSGGTESDNTAIKSALAAQPEKR 87 (379)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCcccHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence 467888888887754 222211111 12233333344444456 467899999999999999888764 4568
Q ss_pred eEEEcCCCCCChHHH---HHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 012124 180 EVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV 256 (470)
Q Consensus 180 ~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~ 256 (470)
+|++...+|+++... ++..|++++.+|.+. ++.+|++.+++.++++++++++++++||||..+| +++|.++|
T Consensus 88 ~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~I~~l~ 162 (379)
T TIGR03402 88 HIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IEEIGEIA 162 (379)
T ss_pred eEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HHHHHHHH
Confidence 999999888876543 445799999999864 3458999999999989999999999999999999 67899999
Q ss_pred HhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHH--HHH--H-Hhhhcc
Q 012124 257 AKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--ACN--K-IQSQFT 331 (470)
Q Consensus 257 ~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~--~l~--~-~~~~~~ 331 (470)
+++ |+++|+|++++. +.....+.. .+-.+++.|.+|.+|.+| +|+++..++..- .+. . ......
T Consensus 163 ~~~-g~~vivD~~~~~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~ 231 (379)
T TIGR03402 163 KER-GALFHTDAVQAV----GKIPIDLKE----MNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRA 231 (379)
T ss_pred HHc-CCEEEEECcccc----cccccCccc----CCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCC
Confidence 999 999999999974 222223322 233477888889776455 788876654310 000 0 000112
Q ss_pred CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCCeecCCC-----ceEEEeeeccCccCCcccC
Q 012124 332 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEG 405 (470)
Q Consensus 332 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 405 (470)
.+++.....++.++++. ..+++++..+++++.++.+.+.|.+ ++++.+..+. +.+.+|+..+
T Consensus 232 gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 299 (379)
T TIGR03402 232 GTENVPGIVGLGKAAEL---ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYI--------- 299 (379)
T ss_pred CCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCC---------
Confidence 34555556666666664 2456778888889999999999985 8888776532 2344454322
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 406 FGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 406 ~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-------------------~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
+..++...|. ++||.+.+|..|.. .+.+|+|++. +++||+++++.|+++++++
T Consensus 300 -----~~~~~~~~l~-~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 300 -----EGEAILLLLD-MEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred -----CHHHHHHhhc-cCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5677887764 55999999876632 2689999997 8999999999999998775
Q ss_pred C
Q 012124 465 R 465 (470)
Q Consensus 465 ~ 465 (470)
+
T Consensus 374 ~ 374 (379)
T TIGR03402 374 R 374 (379)
T ss_pred H
Confidence 4
No 164
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=4.6e-26 Score=225.27 Aligned_cols=339 Identities=14% Similarity=0.162 Sum_probs=228.7
Q ss_pred EccCCC-CCCCChHHHHHHHHHHHHc-------CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHH
Q 012124 98 RLAAGE-PDFDTPVLIAEAGINAIRE-------GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 169 (470)
Q Consensus 98 ~l~~g~-~~~~~~~~~~~a~~~~~~~-------~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~ 169 (470)
+|++++ ..+..++.+++++.+++.+ ....|+...+..+|++.+++++. .++.+++++|.+... .
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~a~~-~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG-------TESAILYSDGASTTS-S 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHHHHH-H
Confidence 455554 4556678899999988876 23447777788899999999874 246788888877777 5
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-----------CCceEEEEcCCCC
Q 012124 170 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-----------EKSRLLILCSPSN 238 (470)
Q Consensus 170 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-----------~~~~~i~l~~p~n 238 (470)
++.+++++||.|+++++.|+++...+...+++++.++.... -+++.+.+.++ +++++|++.+++|
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~ 149 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK 149 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcC
Confidence 67778999999999999999998888888888888776311 13444443442 2577888899999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc---cCCCCCceEEEeccCcccccccceeeEEEc
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS---LPGMWERTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~---~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
|+|.+.+ ++++.++|++| |+++|.||+|. +...+........ +.+..+..|++.|+||.++ ...||+++
T Consensus 150 ~~G~i~~---l~~i~~l~~~~-g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~ 221 (392)
T PLN03227 150 NTGTLAP---LKELVALKEEF-HYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVG 221 (392)
T ss_pred CCCcccC---HHHHHHHHHHc-CCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEec
Confidence 9999999 77899999999 99999999998 3322221111222 2222456799999999876 44599999
Q ss_pred CHHHHHHHHHHhhhccCCC--ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe----------ec
Q 012124 316 PKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK----------MS 383 (470)
Q Consensus 316 ~~~~~~~l~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~----------~~ 383 (470)
++++++.+........++. +++.+.++..++... .+ .+++++.++++.+++.+.|++. +.. +.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~---~~-~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~ 296 (392)
T PLN03227 222 SEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGE---LA-GPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVIT 296 (392)
T ss_pred CHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccC
Confidence 9998887765443334444 466677776666431 11 2456677788888888888752 221 11
Q ss_pred CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC-------CCCCCCcEEEEeec--CHHHHHHHH
Q 012124 384 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD-------AFGDDTCIRISYAA--SLTTLQAAV 454 (470)
Q Consensus 384 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~-------~f~~~~~iRls~~~--~~~~i~~~l 454 (470)
....+..+.+.+.+... ...........++++.+.++ ||.+.+.. .+.++..+|++++. +++++++++
T Consensus 297 ~~~~~~i~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~ 373 (392)
T PLN03227 297 SDPISPIIYLRLSDQEA--TRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLL 373 (392)
T ss_pred CCCCCCEEEEEeCCHHH--hhhhhhhhHHHHHHHHHHHC-CCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHH
Confidence 11223345566643100 00000000124777777766 88886421 23346789999987 999999999
Q ss_pred HHHHHHHHhh
Q 012124 455 ERIKKGLLTL 464 (470)
Q Consensus 455 ~~l~~~l~~~ 464 (470)
+.|+++++++
T Consensus 374 ~~l~~~~~~~ 383 (392)
T PLN03227 374 TVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 165
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.4e-25 Score=218.37 Aligned_cols=331 Identities=22% Similarity=0.243 Sum_probs=247.1
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHcC--CC---CCCCCc----CcHHHHHHHHHHHHHHcCCCCC-CCcEEEecC
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG--FT---RYTPNA----GTLELRSAICHKLKEENGLSYT-PDQILVSNG 162 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~--~~---~y~~~~----g~~~lr~~ia~~l~~~~g~~~~-~~~i~it~g 162 (470)
+++++.|....-.. .|..+.+++.+..... .. .|.... -+.+.|+.+++++ | ++ .++|++|.|
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~----~--a~~~~eIvft~~ 92 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL----N--ADSSDEIVFTRG 92 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh----C--CCCCCeEEEeCC
Confidence 45667777666554 6888889888877531 11 222222 3355666666665 4 35 589999999
Q ss_pred hHHHHHHHHHHh---cCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcC
Q 012124 163 AKQSILQAVLAV---CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 235 (470)
Q Consensus 163 ~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~ 235 (470)
++++|+++..++ +++||+|++.+-.|++.. .+.+..|++++.+|++++ ..++.|.+++.++++||++.++.
T Consensus 93 tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~--g~~~~~~~~~~i~~~Tklvais~ 170 (405)
T COG0520 93 TTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDD--GLLDLDALEKLITPKTKLVALSH 170 (405)
T ss_pred hhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCC--CCcCHHHHHHhcCCCceEEEEEC
Confidence 999999999998 689999999999888644 455667999999999833 45899999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc-ccccccceeeEEE
Q 012124 236 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK-AFAMTGWRLGYIA 314 (470)
Q Consensus 236 p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK-~~~~~G~r~G~~~ 314 (470)
.+|.||...| +++|+++|+++ |+++++|.+++. +..+..+..+ +..+++.|..| .+| | -.+|.++
T Consensus 171 vSn~tG~~~p---v~~I~~la~~~-ga~v~VDaaq~~----~h~~idv~~l----~~Df~afsgHKwl~g-P-~GiGvLy 236 (405)
T COG0520 171 VSNVTGTVNP---VKEIAELAHEH-GALVLVDAAQAA----GHLPIDVQEL----GCDFLAFSGHKWLLG-P-TGIGVLY 236 (405)
T ss_pred ccccccccch---HHHHHHHHHHc-CCEEEEECcccc----CccCCCchhc----CCCEEEEcccccccC-C-CceEEEE
Confidence 9999999999 99999999999 999999999875 3334455444 44599999999 656 5 2389999
Q ss_pred cCHHHHHHHHH----------------------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 012124 315 GPKHFVAACNK----------------------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 372 (470)
Q Consensus 315 ~~~~~~~~l~~----------------------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (470)
+++++++.+.- ........++.....++.++++.- .+...+++.++-++..+++.+
T Consensus 237 ~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~--~~ig~~~i~~~e~~L~~~~~~ 314 (405)
T COG0520 237 VRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYL--LEIGMEAIEAHERELTEYLLE 314 (405)
T ss_pred EchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHH--HHHhHHHHHHHHHHHHHHHHH
Confidence 99999887611 011112223333344444555431 123367788888999999999
Q ss_pred HhccCCCCeecCCC----ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEE
Q 012124 373 SFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIR 440 (470)
Q Consensus 373 ~L~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--------~~~iR 440 (470)
.|+++|++++..+. .++ +.+.++.. .+.+++..|.++ ||.++.|..+.. +..+|
T Consensus 315 ~L~~~~~v~i~g~~~~~r~~~-vsF~v~~~------------~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR 380 (405)
T COG0520 315 GLSELPGVEIYGPPDADRGGI-VSFNVKGI------------HPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIR 380 (405)
T ss_pred HHhcCCCeEEecCCcccCceE-EEEEeCCC------------CHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceE
Confidence 99999999988764 344 55577654 788999888766 799999976642 34699
Q ss_pred EEeec--CHHHHHHHHHHHHHHHH
Q 012124 441 ISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 441 ls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
+|++. +++||+.+++.|+++.+
T Consensus 381 ~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 381 ASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEEeecCCHHHHHHHHHHHHHHhh
Confidence 99997 99999999999998764
No 166
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=8.4e-26 Score=223.35 Aligned_cols=332 Identities=13% Similarity=0.136 Sum_probs=240.0
Q ss_pred cCCCeEEccCCC--CCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC-cEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~i~it~g~~~al~ 168 (470)
+|+.++|+.+|. ..+..++.+++++.+++.... .+ +..-..++++.+++.+.. .++ .+++++++++++.
T Consensus 27 dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~-~~-~~~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~ 98 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW-HS-PNLYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANE 98 (375)
T ss_pred CCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcC-cc-cCccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHH
Confidence 566789998774 344556779999999887532 23 233456788899987742 223 4688999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChH-HHHHHcCCEEEE------ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCC
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPVI------LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 239 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~------v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nP 239 (470)
.+++... ..+++|++.+.+|++.. ..+...|.+... ++...... ..|++.+++.+++++.+|++..++|+
T Consensus 99 ~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~~~a~vi~e~v~~~ 177 (375)
T PRK04260 99 AAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNKNTAAVMLELVQGE 177 (375)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCCCeEEEEECCeECC
Confidence 8887752 34678999899988744 333333322110 00000000 13889999988778888888989999
Q ss_pred cccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccc-ccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 240 TGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 240 tG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
+|.. ++.+.++++.++|+++ |+++|+||+|.++...+..... ...+.+ + +.||||.++ +|+|+||+++++
T Consensus 178 ~G~~~~~~~~l~~~~~l~~~~-~~~~i~De~~~g~g~~g~~~~~~~~~~~p--d----i~t~sK~l~-~G~~ig~~~~~~ 249 (375)
T PRK04260 178 SGVLPADKDFVKALADYCQET-GILLIVDEVQTGMGRTGKLYAFEHYGIEP--D----IFTLAKGLA-NGVPVGAMLAKS 249 (375)
T ss_pred CCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccchhhhHhhCCCC--C----EEEeccccc-CCcceEEEEEcH
Confidence 9986 4578899999999999 9999999999876444321111 222332 2 458999998 999999999999
Q ss_pred HHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC
Q 012124 318 HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 397 (470)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~ 397 (470)
++.+.+.......+++.+++.+.++.++|+.... ++++++.++..+..++.+.+.+.+.+.+... +..|+++|++++.
T Consensus 250 ~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~ 327 (375)
T PRK04260 250 SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNYLQEQLQKALQDKETVTTV-RGLGYMIGIETTA 327 (375)
T ss_pred HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-eccceEEEEEecC
Confidence 9988876544556777899999999999976543 5778888888888888888888766433332 2378889999843
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
+..++.++|.++ ||.+.|.. .+.+|++++. +++++++++++|+++
T Consensus 328 -------------~~~~~~~~l~~~-Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 328 -------------DLSQLVEAARDK-GLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred -------------cHHHHHHHHHhC-CCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 567888888765 99998752 4789999954 899999999999875
No 167
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=1.9e-25 Score=221.50 Aligned_cols=327 Identities=13% Similarity=0.124 Sum_probs=225.1
Q ss_pred CChHHHHHHHHHHHHcCC--------CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCC
Q 012124 107 DTPVLIAEAGINAIREGF--------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG 178 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~~~--------~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~g 178 (470)
++++.+.+++.+...... ..+.......++++.+++++ |. +++++++|+++++..++.+++++|
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~----~~~~~~~g~t~a~~~al~~l~~~g 102 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM----DEARVTHGAREGKFAVMHSLCKKG 102 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhcCCC
Confidence 447888888888774311 11111234577788888775 42 468899999999999999999999
Q ss_pred CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-------CceEEEEcCCCCCcccCCCHHHHHH
Q 012124 179 DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 179 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-------~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
|+|+++.++|.+....++..|++++.++.+.+.++.+|++.+++++++ ++++|++++|+||||...+ +++
T Consensus 103 d~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~ 179 (387)
T PRK09331 103 DYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKK 179 (387)
T ss_pred CEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHH
Confidence 999999999988888889999999999984334566999999998853 6899999999999999888 889
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc-
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF- 330 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~- 330 (470)
|+++|+++ |+++|+|++|+... .+.+... .+..+++.|++|+++ .+.++||+++++++++.+.+....+
T Consensus 180 I~~la~~~-g~~livD~a~~~g~----~~~~~~~----~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~ 249 (387)
T PRK09331 180 VAKVAHEY-GIPFLLNGAYTVGR----MPVDGKK----LGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFG 249 (387)
T ss_pred HHHHHHHc-CCEEEEECCcccCC----cCCCHHH----cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCc
Confidence 99999999 99999999998521 1122222 245688999999997 6668999999999888775542211
Q ss_pred -------cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC--CCceEEEeeeccCccCC
Q 012124 331 -------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTYYGS 401 (470)
Q Consensus 331 -------~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~~g~~~~~~~~~~~~~ 401 (470)
..+.++....++...++. ..+..+ ..++..++.+++.+.|++++|+++.. +...-++.++.|... .
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~aal~~---~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~-~ 324 (387)
T PRK09331 250 VKEVELLGCTLRGAPLVTLMASFPH---VVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFD-E 324 (387)
T ss_pred ccceeeeceecCchHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchh-H
Confidence 111222222333333332 123333 33445667778899999998888763 222223445555210 0
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012124 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 402 ~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~-~~~~i~~~l~~l~~~l~~~~ 465 (470)
... ....+..++.+.|.++ ||...+. +....+|+.... ++++++.+++.|++++++..
T Consensus 325 ~~~--~~~~~~~~~~~~L~~~-gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 325 IAK--KHKRRGFFLYEELKKR-GIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred Hhh--hccccchhHHHHHHHc-CceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhcC
Confidence 000 0001345688888655 9974332 123456777655 99999999999999988754
No 168
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=1.6e-25 Score=219.78 Aligned_cols=284 Identities=15% Similarity=0.198 Sum_probs=203.1
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEe
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 205 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v 205 (470)
.+-..+|++.++++. |. +..++++|+++++.+++ .++++||+|++++|+|++... .++..|++++.+
T Consensus 51 ~pt~~~le~~la~l~----g~----~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v 121 (366)
T PRK08247 51 NPTRGVLEQAIADLE----GG----DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYV 121 (366)
T ss_pred CchHHHHHHHHHHHh----CC----CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEE
Confidence 344677888888875 32 23577888889999776 577899999999999998544 445689999888
Q ss_pred cCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 206 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 206 ~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
+. .|++.+++++++++++|++++|+||+|. ..++++|+++|+++ |++||+|++|....+. .++
T Consensus 122 d~-------~d~~~l~~~i~~~tklv~le~P~NP~~~---~~dl~~I~~la~~~-g~~lIvD~t~~~~~~~----~p~-- 184 (366)
T PRK08247 122 NT-------ASLKAIEQAITPNTKAIFIETPTNPLMQ---ETDIAAIAKIAKKH-GLLLIVDNTFYTPVLQ----RPL-- 184 (366)
T ss_pred CC-------CCHHHHHHhcccCceEEEEECCCCCCCc---HHHHHHHHHHHHHc-CCEEEEECCCcccccc----Cch--
Confidence 75 3889999999889999999999999754 55699999999999 9999999999532211 111
Q ss_pred cCCCCCceEEEeccCccccc-ccceeeEEEcC-HHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 286 LPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
..+..|+++|+||.++- ++++.||++++ .++.+.+...+.....+.+++.|.++...++. +....+++
T Consensus 185 ---~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-------l~~r~~~~ 254 (366)
T PRK08247 185 ---EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-------LALRMRQH 254 (366)
T ss_pred ---hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-------HHHHHHHH
Confidence 13566999999999952 35689999987 67888888777777777888877766665542 33444466
Q ss_pred HHHHHHHHHHhccCCCCe-ecCC-CceEEEeeeccCccCCcccCCCCCCCHHHHHHH---------HHHcCCEEEECCCC
Q 012124 364 RERRDFLVKSFGELEGVK-MSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY---------LLDKAQVALVPGDA 432 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~-~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------L~~~~gI~v~pg~~ 432 (470)
+++++.+.+.|++.|++. +..| .+|+|.| .+...- ....|.+. |.....+.+.|+..
T Consensus 255 ~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~-----------~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~ 322 (366)
T PRK08247 255 EENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEE-----------WVNPFLKSLKLITFAESLGGVESFITYPATQ 322 (366)
T ss_pred HHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHH-----------HHHHHHHcCCcceEccCCCCCceEEECCccc
Confidence 899999999999988876 4444 7899877 563210 12223332 22223466667755
Q ss_pred CCC-------------CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 433 FGD-------------DTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 433 f~~-------------~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
+.. ++.+|||++.. +.++.++.|++++++
T Consensus 323 ~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~ 364 (366)
T PRK08247 323 THADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ 364 (366)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 421 25799999973 345556666666654
No 169
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=8.4e-25 Score=216.42 Aligned_cols=323 Identities=15% Similarity=0.137 Sum_probs=229.3
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC----CCCeEEE
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS----PGDEVII 183 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~----~gd~Vlv 183 (470)
+.+.+.+++.+.+...........+..++.+.+.+.+.+.+|. +++++++++|+++++..++.++.+ +||+|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~ 109 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL--PDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV 109 (371)
T ss_pred chHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC--CCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence 4577778888877653221111235566666777777776774 456789999999999988877654 5799999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEE
Q 012124 184 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 263 (470)
Q Consensus 184 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~ 263 (470)
.+++|..+...++..|++++.+|.+. ++.+|++.|++++++++++++++.++|+||...+ +++|.++|+++ |++
T Consensus 110 ~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~-g~~ 183 (371)
T PRK13520 110 PESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALEN-GIF 183 (371)
T ss_pred cCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHc-CCC
Confidence 99999999888899999999999863 3458999999999888888887888999999999 88899999999 999
Q ss_pred EEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEc-CHHHHHHHHHHhhhc--------cCCC
Q 012124 264 VLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF--------TSGA 334 (470)
Q Consensus 264 iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~--------~~~~ 334 (470)
+++|++|+.+............+.. .+-..+..|.+|.. ++|.++|+++. ++++++.+....... ....
T Consensus 184 livD~a~~~~~~~~~~~~~~~~~~~-~~vd~~~~s~~K~~-~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~ 261 (371)
T PRK13520 184 LHVDAAFGGFVIPFLDDPPNFDFSL-PGVDSITIDPHKMG-LAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTR 261 (371)
T ss_pred EEEEecchhHHHHhhcCCCCccccC-CCCceEEECCcccc-CccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeec
Confidence 9999999865421101111111111 12334556777854 57788988774 666777654211111 1112
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCccCCcccCCCCCCCHH
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 413 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
+.....++..+++.- .+...++.+++..++++++.+.|+++ |++ +..+..++ +.+.++ +..
T Consensus 262 ~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-v~~~~~--------------~~~ 323 (371)
T PRK13520 262 SGAGVAATYAVMKYL--GREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNI-VAFDDP--------------NPD 323 (371)
T ss_pred cChHHHHHHHHHhhh--cHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceE-EEEecC--------------CHH
Confidence 334455555556531 14456778888889999999999888 887 55555565 555664 456
Q ss_pred HHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 414 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 414 ~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
++.+.|.++ ||.+.++. .++++|+|++. ++++++.+++.|+++++
T Consensus 324 ~v~~~L~~~-gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 324 EVREKLRER-GWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHC-CceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 888888766 89887743 34689999874 89999999999998765
No 170
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=1.5e-25 Score=222.31 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=173.3
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH-----HHcCCEEEE
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-----RIADATPVI 204 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-----~~~g~~~~~ 204 (470)
.+-..+|++.++++. | .+.+++++|+++++..++.+++++||+|++++|.|+++...+ +..|++++.
T Consensus 75 ~Pt~~~LE~~lA~l~----g----~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 75 NPTVLNLGRQMAALE----G----TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred ChhHHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 445567777777775 3 357789999999999999999999999999999998887654 347888777
Q ss_pred ecCcCCCCCccCHHhHhhhccC-CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc
Q 012124 205 LPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 283 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~ 283 (470)
++. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++ +++||+|++|..+.+..
T Consensus 147 ~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-gi~livDea~~~~~~~~------ 209 (418)
T PLN02242 147 VDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEK-GVTVVVDNTFAPMVLSP------ 209 (418)
T ss_pred cCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHh-CCEEEEECCCCccCCCH------
Confidence 764 389999999987 5999999999999999997 88999999999 99999999998755421
Q ss_pred cccCCCCCceEEEeccCcccccccce-eeEEEcCHHHHHHHHHHhhh--ccCCCChHHHHHHHHHHhcCCCChHHHHHHH
Q 012124 284 ASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMV 360 (470)
Q Consensus 284 ~~~~~~~~~~i~i~S~sK~~~~~G~r-~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~ 360 (470)
.. .+..|++.||||.++.+|.+ .||+++++++++.+...+.. ...+++...|.+...+... +.+..+.
T Consensus 210 ~~----~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l-----~tl~~r~ 280 (418)
T PLN02242 210 AR----LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL-----PHLSLRM 280 (418)
T ss_pred HH----cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC-----CcHHHHH
Confidence 11 13569999999999878877 59999999999988876542 3345566677777666543 2445566
Q ss_pred HHHHHHHHHHHHHhccCCCCeec
Q 012124 361 KAFRERRDFLVKSFGELEGVKMS 383 (470)
Q Consensus 361 ~~~~~~~~~l~~~L~~~~g~~~~ 383 (470)
++++++++.+.+.|+++ ++++.
T Consensus 281 ~~~~~~a~~la~~L~~~-~~~V~ 302 (418)
T PLN02242 281 KEHCRRAMEYAKRMKEL-GLKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHhC-CCEEE
Confidence 78899999999999987 45554
No 171
>PLN00144 acetylornithine transaminase
Probab=99.95 E-value=2.2e-25 Score=219.71 Aligned_cols=336 Identities=14% Similarity=0.095 Sum_probs=229.9
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+..+ + ......+....+++.+.+.. ..+.++++++++++.+
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~-~~~~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e 86 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH-V-SNVYHTIPQVELAKRLVASS----FADRVFFCNSGTEANE 86 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC-c-cccccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHH
Confidence 5778899988853 3333 78999999999876321 1 11122445566777765432 2369999999999999
Q ss_pred HHHHHhc---C------C------CCeEEEcCCCCCChHHHHHHcCCEE-EE---ecCcCCCCC--ccCHHhHhhhcc-C
Q 012124 169 QAVLAVC---S------P------GDEVIIPAPFWVSYPEMARIADATP-VI---LPTRISENF--LLDPKVLESKLT-E 226 (470)
Q Consensus 169 ~~~~~l~---~------~------gd~Vlv~~p~y~~~~~~~~~~g~~~-~~---v~~~~~~~~--~~d~~~l~~~l~-~ 226 (470)
.+++... . + ..+|+....+|++............ .. .|..++.-+ ..|++.+++.+. .
T Consensus 87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 166 (382)
T PLN00144 87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG 166 (382)
T ss_pred HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence 9988642 1 0 2468888999998775444322211 00 111000000 027899998885 4
Q ss_pred CceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccc-ccccCCCCCceEEEeccCcccc
Q 012124 227 KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFA 304 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~S~sK~~~ 304 (470)
++++|++...+||.|. .++.+.+++|.++|++| |+++|+||+|.+|...+..... +..+.++ +.||||.++
T Consensus 167 ~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~-g~llI~DEv~tg~gr~g~~~~~~~~~~~PD------i~t~sK~l~ 239 (382)
T PLN00144 167 KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEA-GALLVFDEVQCGLGRTGYLWAHEAYGVEPD------IMTLAKPLA 239 (382)
T ss_pred CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchHhhhhhcCCCCC------EEEeccccc
Confidence 6777776444999443 23455599999999999 9999999999987665532221 3445442 888999998
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHH---HHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-
Q 012124 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVA---ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV- 380 (470)
Q Consensus 305 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~---~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~- 380 (470)
+|+|+||+++++++++.+.......+++.+++.+.++.+ .++.+.+ .++++++.+.+ ++.+.+.+.+.|.+
T Consensus 240 -~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~-~~~~~~~g~~l---~~~l~~~~~~~~~~~ 314 (382)
T PLN00144 240 -GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGF-LASVAKKGEYL---RELLRRKLGGNPHVK 314 (382)
T ss_pred -CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchH-HHHHHHHHHHH---HHHHHHHHhhCCCce
Confidence 999999999999999888655556678899999999984 4454433 45555555555 34445555555433
Q ss_pred eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 381 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
.+. ..|+++|+++.. +...+++.++++ ||.+.|+. ..+.+|++++. +++++++++++|+
T Consensus 315 ~vr--g~G~~~~l~l~~-------------~~~~~~~~~~~~-Gv~i~~~~---~~~~lrl~p~~~~~~~~i~~~~~~l~ 375 (382)
T PLN00144 315 EVR--GVGLLVGIQLDV-------------PAGPLVDACRDS-GLLVLTAG---KGDVVRLVPPLVISEAELEQAVEILA 375 (382)
T ss_pred eee--cCceEEEEEecC-------------ccHHHHHHHHHC-CeEEeecC---CCCEEEEeCCCccCHHHHHHHHHHHH
Confidence 332 378999999832 456788877765 99999873 24789999886 8899999999999
Q ss_pred HHHHhh
Q 012124 459 KGLLTL 464 (470)
Q Consensus 459 ~~l~~~ 464 (470)
+++.++
T Consensus 376 ~~l~~~ 381 (382)
T PLN00144 376 DCLPAL 381 (382)
T ss_pred HHHHhc
Confidence 998754
No 172
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.95 E-value=2.5e-25 Score=221.71 Aligned_cols=341 Identities=14% Similarity=0.157 Sum_probs=234.8
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+... ++. ....+....+++.+.+..+ .+++++++++++|++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~~~~sGseA~e 110 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH-TGN-GYTNEPVLRLAKKLIDATF----ADRVFFCNSGAEANE 110 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc-ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEcCCcHHHHH
Confidence 5678899988642 2333 78999999999865211 111 1123344556666654332 369999999999999
Q ss_pred HHHHHhc--------CCCCeEEEcCCCCCChHHHHHHcCCEEEE----ecCcC--CCCCccCHHhHhhhccCCceEEEEc
Q 012124 169 QAVLAVC--------SPGDEVIIPAPFWVSYPEMARIADATPVI----LPTRI--SENFLLDPKVLESKLTEKSRLLILC 234 (470)
Q Consensus 169 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~--~~~~~~d~~~l~~~l~~~~~~i~l~ 234 (470)
.+++... ...+.|+..+.+|++........+..... .++.+ ..-...|++.+++.+++++++|++
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii- 189 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV- 189 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-
Confidence 9998752 13478999999999987544332221100 01100 000114889999999877887777
Q ss_pred CCCCCcccCC--CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCcccccccceee
Q 012124 235 SPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLG 311 (470)
Q Consensus 235 ~p~nPtG~~~--s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G 311 (470)
.|.|++|-++ +.+.+++|.++|++| |+++|+||+|.++.+.+.... ....+.+ + +.||||.++ +|+|+|
T Consensus 190 EPv~~~gg~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~gr~G~~~~~~~~~v~p--D----i~t~sK~l~-gG~~ig 261 (406)
T PRK12381 190 EPIQGEGGVIPADKAFLQGLRELCDRH-NALLIFDEVQTGVGRTGELYAYMHYGVTP--D----VLTTAKALG-GGFPIG 261 (406)
T ss_pred eCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEcchhhCCCCCcchhhhHhhCCCC--C----EEEehhhhh-CCCceE
Confidence 6888888654 799999999999999 999999999988765553211 0112222 2 468999998 999999
Q ss_pred EEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC-CCe--ecCCCce
Q 012124 312 YIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GVK--MSEPQGA 388 (470)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~--~~~~~~g 388 (470)
|+++++++++.+.......+++.+++.+.++.+.|+.- . ..++++.++++.+++.+.|+++. ... ......|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G 336 (406)
T PRK12381 262 AMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELI---N--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLG 336 (406)
T ss_pred EEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCe
Confidence 99999999988876555566788999999999987641 1 23567778888888888887651 121 1223457
Q ss_pred EEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012124 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~~ 466 (470)
+++|+.+++... .....+.+.|.++ ||.+.+.. ++.+|++++. +++++++++++|+++++++..
T Consensus 337 l~~~~~l~~~~~---------~~~~~~~~~l~~~-Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 337 LLIGCVLNAEYA---------GKAKQISQEAAKA-GVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred EEEEEEecCchh---------hHHHHHHHHHHHC-CcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 888888864210 0345677776655 99987632 4689998874 999999999999999987643
No 173
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.95 E-value=3e-25 Score=217.39 Aligned_cols=305 Identities=19% Similarity=0.203 Sum_probs=218.5
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--------
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD-------- 179 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd-------- 179 (470)
+|+++++++.+...+ |. +..++++++++++.+.+|. +++++|+|+++++.+++.+++++||
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~----~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~ 93 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGV----EDAVIVSSASAGIAQSVAAVITRGNRYLVENLH 93 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCC----CeEEEEcCHHHHHHHHHHHHhcCCCcchhhccc
Confidence 588999999988643 32 4678999999999887774 4789999999999999999999998
Q ss_pred -------eEEEcCCCCCCh----HHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEE-EcCCCCCcccCCCHH
Q 012124 180 -------EVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI-LCSPSNPTGSVYPKN 247 (470)
Q Consensus 180 -------~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~-l~~p~nPtG~~~s~~ 247 (470)
+|+++.|.|..+ ...+...|++++.++.+ +.+|++.+++++++++++++ +++|+||+|.+.+
T Consensus 94 ~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~-- 167 (363)
T TIGR01437 94 DSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLS-- 167 (363)
T ss_pred ccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCC--
Confidence 999999888766 46778899999999863 34899999999999999776 5788999999999
Q ss_pred HHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh
Q 012124 248 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 327 (470)
Q Consensus 248 ~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~ 327 (470)
+++|+++|++| |+++|+|++|+. . ...+..+ +..+++.|++|.+ +|++.|++++++++++.+....
T Consensus 168 -~~~i~~~a~~~-gi~vivD~a~~~---~---~~~~~~~----g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~ 233 (363)
T TIGR01437 168 -VEDAAQVAQEH-NLPLIVDAAAEE---D---LQKYYRL----GADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQS 233 (363)
T ss_pred -HHHHHHHHHHc-CCeEEEECCCCC---c---hHHHHHc----CCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhcc
Confidence 67889999999 999999999972 1 1111122 2357889999976 5778999999988887764322
Q ss_pred hhcc-----CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC--ceEE---EeeeccC
Q 012124 328 SQFT-----SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GAFY---LFIDFST 397 (470)
Q Consensus 328 ~~~~-----~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~g~~---~~~~~~~ 397 (470)
.... ...+..++.++...+.. +..+..+.+.++++.+.+.|++++|+.+..+. .+.. .-+.+..
T Consensus 234 ~~~~~~~~~~~~~~~gl~aAl~~~~~------~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~ 307 (363)
T TIGR01437 234 KGIGRAMKVGKENILGLTAALEQYLS------TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDE 307 (363)
T ss_pred CCCcceeccCHHHHHHHHHHHHHHHc------cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEec
Confidence 1110 01112233333333321 12233334455677899999999898775321 1111 1122221
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCC--EEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQ--VALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKG 460 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~g--I~v~pg~~f~~~~~iRls~~~-~~~~i~~~l~~l~~~ 460 (470)
. +...+..++.+.|.++ + |.+++ .|...+.+|+++.. +++|++.++++|+++
T Consensus 308 ~--------~~g~~~~~l~~~L~~~-~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 308 S--------ELGMTAADVVQALRQG-EPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred c--------CCCCCHHHHHHHHhcC-CCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 0 0012778999988653 5 66665 46677899999988 899999999999875
No 174
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=3e-25 Score=221.62 Aligned_cols=326 Identities=17% Similarity=0.197 Sum_probs=221.8
Q ss_pred EEccCCCCCCCChHHHHHHHHHHHH--cCCCCCC---C------CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 97 IRLAAGEPDFDTPVLIAEAGINAIR--EGFTRYT---P------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~~~~--~~~~~y~---~------~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+.|..+... ++|+.+.+++.+.+. ....... . .....++|+.+++++ | +++++|++++|+++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----g--~~~~~v~~~~g~t~ 77 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI----G--ADPREIVFTSGATE 77 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc----C--cCcCeEEEeCCHHH
Confidence 455555554 457778888888765 2111110 0 112344556666554 5 46788999999999
Q ss_pred HHHHHHHHhc----CCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCC
Q 012124 166 SILQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN 238 (470)
Q Consensus 166 al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~n 238 (470)
++.+++.++. ++||+|++++++|+.....+ +..|++++.++++. ++.+|++.++++++++++++++++++|
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n 155 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIMHVNN 155 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECcCC
Confidence 9999887763 78999999999998876544 34699999999864 345899999999999999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~ 318 (470)
|||.+++ +++|.++|+++ +++||+|++++. +.....+... +-.+++.|++|.+| |+ ++|+++++++
T Consensus 156 ~tG~~~~---~~~I~~la~~~-g~~vivD~a~~~----g~~~~~~~~~----~~D~~~~s~~K~~g-p~-g~G~l~~~~~ 221 (404)
T PRK14012 156 EIGVIQD---IAAIGEICRER-GIIFHVDAAQSV----GKVPIDLSKL----KVDLMSFSAHKIYG-PK-GIGALYVRRK 221 (404)
T ss_pred Cccchhh---HHHHHHHHHHc-CCEEEEEcchhc----CCcccCcccC----CCCEEEEehhhccC-CC-ceEEEEEecC
Confidence 9999999 78999999999 999999999874 2222222222 33477789999887 54 6899888765
Q ss_pred HHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC-----C
Q 012124 319 FVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-----Q 386 (470)
Q Consensus 319 ~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-----~ 386 (470)
....+... ......+.+.....++.+++.. ......+..++.++.++++.+.|++++++.+..+ .
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~ 298 (404)
T PRK14012 222 PRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---AKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP 298 (404)
T ss_pred CCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 43322211 0011112233333333344443 1334555677788888899999988877765422 1
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA-- 445 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-------------------~~~iRls~~~-- 445 (470)
..+++|+.+. +..++...| + ++.+..|..|.. .+.+|++++.
T Consensus 299 ~~~~~~~~~~--------------~~~~~~~~l--~-~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~ 361 (404)
T PRK14012 299 GNLNVSFNYV--------------EGESLIMAL--K-DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT 361 (404)
T ss_pred CEEEEEEeCc--------------CHHHHHHhC--C-CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC
Confidence 2344555543 334566655 2 677777755532 2679999997
Q ss_pred CHHHHHHHHHHHHHHHHhhC
Q 012124 446 SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 446 ~~~~i~~~l~~l~~~l~~~~ 465 (470)
++++++.+++.|+++++.++
T Consensus 362 t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 362 TEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999887664
No 175
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.95 E-value=4.2e-25 Score=220.55 Aligned_cols=328 Identities=15% Similarity=0.189 Sum_probs=226.1
Q ss_pred cCCCeEEccCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|...... ++.+.+++.+++.+...... .-..+....+++.+.+..| .+++++++++++|+.
T Consensus 39 ~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGs~A~e 112 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR--AFRNDQLAPLYEELAALTG----SHKVLPMNSGAEAVE 112 (401)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHH
Confidence 56788999888654444 78899999999876322110 0012333444444443333 358999999999999
Q ss_pred HHHHHhcC---------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCcCCCCCccCHHhHhhhcc
Q 012124 169 QAVLAVCS---------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 169 ~~~~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+++.+.. +| ++|++.+-+|++....+...+. ++..++. .|++.+++.+.
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~ 185 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 99998742 24 6888888888876544333221 2222321 48899999998
Q ss_pred CCceEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCccc
Q 012124 226 EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAF 303 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~~ 303 (470)
+++++|++++|+||+|.+++ .+.+++|.++|++| |+++|+||+|..+.+.+.... ...... .+ +.+ ++|.+
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~-gi~lI~DEv~~g~g~~g~~~~~~~~g~~--~D--~~~--~~K~l 258 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN-NVTLILDEIQTGLGRTGKLLAEEHEGIE--AD--VTL--IGKAL 258 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCchHhHHhhcCCC--CC--EEE--ecccc
Confidence 89999999999999999987 45699999999999 999999999987654432110 011111 12 222 47999
Q ss_pred cccc-ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC--C
Q 012124 304 AMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--V 380 (470)
Q Consensus 304 ~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~ 380 (470)
+ .| +|+||+++++++++.+.......+++.+++.|.++.+.|+. .++ ....+.++++.+++.+.|+++.. +
T Consensus 259 ~-gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~---l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~ 332 (401)
T PRK00854 259 S-GGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKV---LTE--EGMIENAAEMGAYFLEGLRSIRSNIV 332 (401)
T ss_pred c-CCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHH---HHH--cCHHHHHHHHHHHHHHHHHhhccCce
Confidence 7 56 69999999999998876544555667899999999998874 121 23567778888888888887621 1
Q ss_pred eecCCCceEEEeeec-cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHH
Q 012124 381 KMSEPQGAFYLFIDF-STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERI 457 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l 457 (470)
....+.+.++.+ .+ ++. .+..++++.|+++ ||.+.+. ..+++|++++ .++++|++++++|
T Consensus 333 ~~~~g~g~~~~i-~~~~~~-----------~~~~~~~~~L~~~-GV~v~~~----~~~~lR~~p~~~~t~e~i~~~i~~l 395 (401)
T PRK00854 333 REVRGRGLMLAV-ELEPEA-----------GGARQYCEALKER-GLLAKDT----HDHTIRLAPPLVITREQVDWALEQI 395 (401)
T ss_pred EEEeccceEEEE-EEecCc-----------hhHHHHHHHHHHC-CeEEecC----CCCEEEEeCCcccCHHHHHHHHHHH
Confidence 112334445443 43 321 1467888988876 9998753 2479999975 4999999999999
Q ss_pred HHHHH
Q 012124 458 KKGLL 462 (470)
Q Consensus 458 ~~~l~ 462 (470)
++++.
T Consensus 396 ~~~l~ 400 (401)
T PRK00854 396 AKVLA 400 (401)
T ss_pred HHHhh
Confidence 98864
No 176
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.94 E-value=8.9e-25 Score=218.27 Aligned_cols=340 Identities=16% Similarity=0.108 Sum_probs=223.3
Q ss_pred cCCCeEEccCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~---~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++||..|..... .++.+.+++.+++....... .. -..+..+.+.+.+.+..+ .+.+++++++++|..
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A~e 102 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS-RA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAEAGE 102 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc-cc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHHHHH
Confidence 5678899988865443 37889999999886532211 11 112344555555554333 268899999999999
Q ss_pred HHHHHhcC----------CCCeEEEcCCCCCChHHHHH-HcCCEEEE---ecCcCC--CCCccCHHhHhhhcc-CCceEE
Q 012124 169 QAVLAVCS----------PGDEVIIPAPFWVSYPEMAR-IADATPVI---LPTRIS--ENFLLDPKVLESKLT-EKSRLL 231 (470)
Q Consensus 169 ~~~~~l~~----------~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~---v~~~~~--~~~~~d~~~l~~~l~-~~~~~i 231 (470)
.+++.+.. .++.|++.+-+|++...... ..+..... .+.... .-...|++.+++.++ +++++|
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v 182 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAF 182 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEE
Confidence 99987631 34788888888888664332 22211110 010000 000138999999996 678899
Q ss_pred EEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCccccccc-c
Q 012124 232 ILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAMTG-W 308 (470)
Q Consensus 232 ~l~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~~~~~G-~ 308 (470)
++.+++||||..++ .+.+++|.++|++| |+++|+||+|..+.+.+.... ......+ + +.+|||.++ .| +
T Consensus 183 ~~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~Dev~~g~g~~G~~~~~~~~~~~p--d----~~~~sK~l~-~g~~ 254 (400)
T PTZ00125 183 IVEPIQGEAGVIVPDDGYLKQVYELCKKY-NVLLIVDEIQTGLGRTGKLLAHDHEGVKP--D----IVLLGKALS-GGLY 254 (400)
T ss_pred EEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhhHHHhcCCCC--C----EEEEccccc-CCCc
Confidence 88888999999886 56699999999999 999999999987655443111 1111211 1 335789997 56 4
Q ss_pred eeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCCeecC
Q 012124 309 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSE 384 (470)
Q Consensus 309 r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~ 384 (470)
|+||+++++++++.+.......+++.+++.|.++.+.|+.-.. +. ..+..+++.+.+.+.|++ .+.+....
T Consensus 255 ~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~-~~----~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 329 (400)
T PTZ00125 255 PISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE-EK----LAENAQRLGEVFRDGLKELLKKSPWVKEIR 329 (400)
T ss_pred CcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cC----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEe
Confidence 9999999999998876555555677889999888777653100 11 222333334444444433 22223233
Q ss_pred CCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 012124 385 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 385 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~l~ 462 (470)
+ .|.++|+.++... ..+..++++.|+++ ||.+.|+. .+++|++++ .+++++++++++|+++++
T Consensus 330 ~-~g~~~~v~~~~~~---------~~~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~ 394 (400)
T PTZ00125 330 G-KGLLNAIVFDHSD---------GVNAWDLCLKLKEN-GLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLK 394 (400)
T ss_pred c-ccEEEEEEEccCc---------chHHHHHHHHHHHC-CeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 3 5666778776410 01467788888765 99998863 578999975 499999999999999998
Q ss_pred hhC
Q 012124 463 TLR 465 (470)
Q Consensus 463 ~~~ 465 (470)
++.
T Consensus 395 ~~~ 397 (400)
T PTZ00125 395 SFD 397 (400)
T ss_pred HHh
Confidence 764
No 177
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=8.2e-25 Score=218.22 Aligned_cols=328 Identities=17% Similarity=0.184 Sum_probs=226.5
Q ss_pred EEccCCCCCCCChHHHHHHHHHHHHcCCCCC---CC------CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 97 IRLAAGEPDFDTPVLIAEAGINAIREGFTRY---TP------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y---~~------~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+.|..+.+. +.|+.+.+++.+.+......- .. .....++|+.++++ +| +++++|++|+|+++++
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~g--~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAEL----IG--ADSREIVFTSGATESN 77 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHH----hC--CCCCeEEEeCCHHHHH
Confidence 555555554 357778888887765321110 00 11234455666655 45 4678999999999999
Q ss_pred HHHHHHhc----CCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCc
Q 012124 168 LQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 240 (470)
Q Consensus 168 ~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPt 240 (470)
.+++..+. ++||+|++..+.|+.+...+ +..|++++.++++. ++.+|++.++++++++++++++++++|||
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~~~n~t 155 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMHVNNEI 155 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECCCcCc
Confidence 98887653 68999999999998866543 45699999999864 34589999999998889999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHH
Q 012124 241 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320 (470)
Q Consensus 241 G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~ 320 (470)
|..++ +++|.++|+++ |+++++|++++.. ..+..+.. .+-.+++.|++|.+|.+| +|+++..++..
T Consensus 156 G~~~~---~~~I~~l~~~~-g~~livD~a~a~g----~~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~ 221 (402)
T TIGR02006 156 GVIQD---IAAIGEICRER-KVFFHVDAAQSVG----KIPINVNE----LKVDLMSISGHKIYGPKG--IGALYVRRKPR 221 (402)
T ss_pred eeccc---HHHHHHHHHHc-CCEEEEEcchhcC----CcccCccc----cCCCEEEEehhhhcCCCc--eEEEEEccCCC
Confidence 99998 78999999999 9999999998742 11112221 244588888999887335 78888776543
Q ss_pred HHHHHHh-------hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc---eEE
Q 012124 321 AACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFY 390 (470)
Q Consensus 321 ~~l~~~~-------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~ 390 (470)
..+.... ......++.....++..+++. ..+.++...+++++.++.+.+.|++++++.+..+.. ...
T Consensus 222 ~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~ 298 (402)
T TIGR02006 222 VRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI---AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGN 298 (402)
T ss_pred CCCCceecCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCe
Confidence 3222111 112233455555555566664 245677778889999999999998888876653211 111
Q ss_pred EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHH
Q 012124 391 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTT 449 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-------------------~~~iRls~~~--~~~~ 449 (470)
+.+.++.. +..++...| + +|.+..|..+.. .+++|+|++. +++|
T Consensus 299 ~~v~f~~~------------~~~~~~~~l--~-~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~ed 363 (402)
T TIGR02006 299 LNVSFNYV------------EGESLIMAL--K-DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEE 363 (402)
T ss_pred EEEEEeCc------------CHHHHHHhc--C-CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHH
Confidence 12333321 445565544 3 788888766532 2689999997 8999
Q ss_pred HHHHHHHHHHHHHhhC
Q 012124 450 LQAAVERIKKGLLTLR 465 (470)
Q Consensus 450 i~~~l~~l~~~l~~~~ 465 (470)
++.+++.|+++++.++
T Consensus 364 id~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 364 IDYAVKLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887653
No 178
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=4.3e-24 Score=214.33 Aligned_cols=336 Identities=15% Similarity=0.097 Sum_probs=222.2
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCC-CCCCC---CcC---cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTP---NAG---TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~y~~---~~g---~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
++.++|..++.. +|+.+++++.+.+.... .+++. ..| ...+.+...+.+++.+|. +.++|++++| +++
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~sg-t~a 99 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHSG-SQA 99 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCCc-hHH
Confidence 566899988766 57888888876653211 11110 112 122222233456666674 4456766665 568
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHH-----HHHHcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCCCCCc
Q 012124 167 ILQAVLAVCSPGDEVIIPAPFWVSYPE-----MARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 240 (470)
Q Consensus 167 l~~~~~~l~~~gd~Vlv~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPt 240 (470)
+..++.++++|||+|+++.|+|.++.. .+...|++++.++++.+ ++.+|++.+++++++ ++++++++.++||
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~~~~~~~~- 177 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEHKPKLIIAGASAYS- 177 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhcCCCEEEECCCcCC-
Confidence 999999999999999999999976532 12345678888888643 366999999999964 7898888765554
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEEeccccc-cccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC-HH
Q 012124 241 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KH 318 (470)
Q Consensus 241 G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~-~~ 318 (470)
...+ +++|.++|+++ |+++|+|++|.. +.+.+.....+. ...++++||||.+ +|.|.||++++ ++
T Consensus 178 -~~~~---~~~I~~la~~~-~~~livD~a~~~g~~~~g~~~~~~~------~~di~~~S~~K~l--~g~~gg~i~~~~~~ 244 (416)
T PRK00011 178 -RPID---FKRFREIADEV-GAYLMVDMAHIAGLVAAGVHPSPVP------HADVVTTTTHKTL--RGPRGGLILTNDEE 244 (416)
T ss_pred -CccC---HHHHHHHHHHc-CCEEEEECcchhcccccCccCCCCC------CCcEEEecCCcCC--CCCCceEEEeCCHH
Confidence 4456 88999999999 999999999753 222221111111 2348899999976 67889999996 68
Q ss_pred HHHHHHHHhhhccCCCChH-HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC-CCceEEEeeecc
Q 012124 319 FVAACNKIQSQFTSGASSI-SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 396 (470)
Q Consensus 319 ~~~~l~~~~~~~~~~~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~ 396 (470)
+++.+.........+.+.. .+.++..++..- ..+++++.+++++++++++.+.|+++ |+++.. ...++++|+.++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~ 321 (416)
T PRK00011 245 LAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA--LEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLR 321 (416)
T ss_pred HHHHHHHHhCccccCCccHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCc
Confidence 8888877665444333333 222222222210 13456778888999999999999987 777643 123477888885
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC-CC-----CCCCcEEEEee------cCHHHHHHHHHHHHHHHHh
Q 012124 397 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD-AF-----GDDTCIRISYA------ASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~-~f-----~~~~~iRls~~------~~~~~i~~~l~~l~~~l~~ 463 (470)
+.- .+..++.+.|. +.||.+..+. .+ ..+..+|++.. .++++++..++.|++++..
T Consensus 322 ~~~----------~~~~~~~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 322 SKG----------LTGKEAEAALE-EANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred ccC----------CCHHHHHHHHH-HcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 320 14566777665 4599997432 11 12457999642 2689999999999988765
No 179
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.94 E-value=2.4e-24 Score=213.50 Aligned_cols=220 Identities=14% Similarity=0.189 Sum_probs=166.9
Q ss_pred CC--CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCC
Q 012124 127 YT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 200 (470)
Q Consensus 127 y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 200 (470)
|+ +..+..+|+++++++.. .+++++++|+++++..++.+++++||+|++++|.|+.+... ++..|+
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 55 67788999999999963 24678899999999999999999999999999999876644 467899
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCEEEEEeccccccccCCCC
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPAT 279 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~-~~~~iI~Dd~~~~~~~~~~~ 279 (470)
+++.++. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++ +++++|+|++|....+.
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~--- 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ--- 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC---
Confidence 9998875 2889999999989999999999999999999 88888888884 27999999999875432
Q ss_pred cccccccCCCCCceEEEeccCccccccccee-eEEEcCHHHHHHHHHH--hhhccCCCChHHHHHHHHHHhcCCCChHHH
Q 012124 280 HTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVV 356 (470)
Q Consensus 280 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~-G~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~ 356 (470)
.++ . .+..|++.|+||.++.+|.++ ||+++++++++.++.. ....+.+.+++....+...++. +
T Consensus 197 -~~l-~----~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t-------l 263 (400)
T PRK06234 197 -RPL-Q----LGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT-------L 263 (400)
T ss_pred -Cch-h----hCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-------H
Confidence 111 1 245599999999998788775 9999999988887643 3334455666655444444432 2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC
Q 012124 357 SKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 357 ~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
..+.++..++...+.+.|++.|.+
T Consensus 264 ~~r~~~~~~na~~~a~~L~~~~~V 287 (400)
T PRK06234 264 QIRMEKHCKNAMKVAKFLESHPAV 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCe
Confidence 233344445666666777665443
No 180
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=2.3e-23 Score=206.30 Aligned_cols=318 Identities=16% Similarity=0.175 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc------CCCCeEE
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC------SPGDEVI 182 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~------~~gd~Vl 182 (470)
.+.+.+++...+......-....|..++.+.+.+.+.+..|. +++++++++|+++++..++.++. ++||+|+
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl 110 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHL--PDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNII 110 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCC--CCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEE
Confidence 344455665554432111111125556556666666666674 56788999999999988776653 4779999
Q ss_pred EcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 012124 183 IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 262 (470)
Q Consensus 183 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~ 262 (470)
+++++|.++...++..|++++.++.+. ++.+|++.+++++++++..+++..|+||||...+ +++|.++|+++ ++
T Consensus 111 ~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~-~~ 184 (373)
T TIGR03812 111 VPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALEN-GI 184 (373)
T ss_pred ECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHc-CC
Confidence 999999999999999999999999863 4568999999999877765555558999999988 88889999999 99
Q ss_pred EEEEeccccccccC--C--CCcccccccCCCCCceEEEeccCcccccccceeeEEE-cCHHHHHHHHHHhhhcc------
Q 012124 263 LVLSDEIYEHIIYA--P--ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFT------ 331 (470)
Q Consensus 263 ~iI~Dd~~~~~~~~--~--~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~-~~~~~~~~l~~~~~~~~------ 331 (470)
++|+|++|+.+... . .....+ .+.. .+-..+..|.+| +++++.++|+++ .++++++.+........
T Consensus 185 ~livD~a~~~~~~~~~~~~~~~~~~-d~~~-~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 261 (373)
T TIGR03812 185 YLHVDAAFGGFVIPFLKKGYNPPPF-DFSL-PGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQAT 261 (373)
T ss_pred eEEEEcCchhHHHHHHhcCCCCCCc-cccC-CCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcc
Confidence 99999999864321 0 000010 1100 122244567789 445778888665 67777776642111111
Q ss_pred --CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCccCCcccCCCC
Q 012124 332 --SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGK 408 (470)
Q Consensus 332 --~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 408 (470)
...+.....++..+++.- .+..+++..++..++++++.+.|+++ |+. +..+..++ +.+.++
T Consensus 262 ~~gt~~~~~~~~~~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-v~~~~~------------ 325 (373)
T TIGR03812 262 ITGTRSGASAAATYAVIKYL--GREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNI-VAFEVD------------ 325 (373)
T ss_pred eEeechhHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceE-EEEEeC------------
Confidence 122334455555566531 24567788899999999999999988 553 44455554 556665
Q ss_pred CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012124 409 IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 409 ~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
+..++.++|.++ ||.+.++. .++++|++++. ++++++.+++.|++
T Consensus 326 --~~~~v~~~L~~~-gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 --DPEEVRKKLRDR-GWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred --CHHHHHHHHHHC-CceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 345788888766 89887652 35789999985 88999999999875
No 181
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.93 E-value=1.2e-23 Score=209.74 Aligned_cols=351 Identities=14% Similarity=0.125 Sum_probs=228.3
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+ ........+....+++.+....+. ...+.+++++++++|.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e 115 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH-TAYQIVPYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAVE 115 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccC-cccCccCCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHHH
Confidence 67788999888533 333 78999999999876321 111112345556666666653321 12258999999999999
Q ss_pred HHHHHhcC-CC-CeEEEcCCCCCChHHHHHH-cCC-------------EEEEecCcCCCCCcc----CHHhHhhhcc---
Q 012124 169 QAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISENFLL----DPKVLESKLT--- 225 (470)
Q Consensus 169 ~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~----d~~~l~~~l~--- 225 (470)
.+++.... .| .+|+....+|++....... .|. .++.+|...+. .++ +++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~ 194 (421)
T PRK09792 116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDI 194 (421)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhcc
Confidence 98886531 23 5788888999987543322 121 12223332111 112 3477777774
Q ss_pred --CCceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcc
Q 012124 226 --EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 226 --~~~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
+++++|++...++|+|..+ |.+.+++|.++|++| |+++|+||++.+|.+.+.. ..+..+....+ +.+|||.
T Consensus 195 ~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD----i~t~gK~ 268 (421)
T PRK09792 195 EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH-GIVMIADEVQSGFARTGKL-FAMDHYADKPD----LMTMAKS 268 (421)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCch-hHHHhcCCCCc----EEEeehh
Confidence 3567777766699999865 999999999999999 9999999999998665532 33333322122 6789999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee
Q 012124 303 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 382 (470)
Q Consensus 303 ~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 382 (470)
++ +|+|+||+++++++++.+.......+++.+++.+.++.+.++.-.. .++++++++.-+..++.+.+..+++|. +
T Consensus 269 l~-~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~l~~~~p~--v 344 (421)
T PRK09792 269 LA-GGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK-ESLCERANQLGQRLKNTLIDAKESVPA--I 344 (421)
T ss_pred hc-CCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHhCCC--c
Confidence 98 9999999999999998876555556788999999966666553111 345555553333333333333233543 2
Q ss_pred cCCCc-eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012124 383 SEPQG-AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 383 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
..+.+ |+++|+++++...... .......+++.++++ ||.+.+... ..+.|||.++. +++++++++++|.+
T Consensus 345 ~~vrG~Gl~~~ie~~~~~~~~~----~~~~~~~l~~~~~~~-Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l~~ 417 (421)
T PRK09792 345 AAVRGLGSMIAAEFNDPQTGEP----SAAIAQKIQQRALAQ-GLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQD 417 (421)
T ss_pred ceecccceEEEEEecCCccCCc----chHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHHHH
Confidence 33455 8999999974310000 001245677777765 898864221 14789999775 89999999999999
Q ss_pred HHH
Q 012124 460 GLL 462 (470)
Q Consensus 460 ~l~ 462 (470)
+++
T Consensus 418 ~l~ 420 (421)
T PRK09792 418 ALS 420 (421)
T ss_pred HHh
Confidence 875
No 182
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=2.9e-23 Score=199.71 Aligned_cols=332 Identities=20% Similarity=0.214 Sum_probs=239.1
Q ss_pred CCCeEEccCCC-CCCCChHHHHHHHHHHHHc-CC--CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 93 GVSVIRLAAGE-PDFDTPVLIAEAGINAIRE-GF--TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 93 ~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~-~~--~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
++++++|++++ ..+..++.+++++.+++.+ +. ..-....|..++.+.+.+.+.+++| .++-+++++|-. +..
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g---~e~al~f~SGy~-AN~ 113 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG---AEAALLFSSGFV-ANL 113 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEcccch-hHH
Confidence 67889999998 5677788899999998876 21 1111123444444444444444445 334555555554 566
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCccc
Q 012124 169 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGS 242 (470)
Q Consensus 169 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~ 242 (470)
.++.+|.+++|.|+.+.-.|.+..+.++..+++++.+.. .|++.|++.+++ +.+.|++...-...|.
T Consensus 114 ~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGd 186 (388)
T COG0156 114 GLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGD 186 (388)
T ss_pred HHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCC
Confidence 688899999999999999999999999999999998885 388999999965 2455666666778999
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC-CCceEEEeccCcccccccceeeEEEcCHHHHH
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 321 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~ 321 (470)
+.| +++|++++++| ++++++||+|+...+++.+......+.-. .+..|.++||||.+|..| ||+.++..+++
T Consensus 187 iAp---L~~l~~L~~ky-~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d 259 (388)
T COG0156 187 IAP---LPELVELAEKY-GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALID 259 (388)
T ss_pred cCC---HHHHHHHHHHh-CcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHH
Confidence 999 89999999999 99999999999988876554444333221 456899999999999777 99999999999
Q ss_pred HHHHHhhhccC--CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCcc
Q 012124 322 ACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 399 (470)
Q Consensus 322 ~l~~~~~~~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~ 399 (470)
.+....+.+.+ +.|+....++...|+. -......+++++++...+...+... |+.+.+..+.+ +.+.+.+.-
T Consensus 260 ~L~~~ar~~ifStalpP~~aaa~~~al~~----l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I-~pv~~gd~~ 333 (388)
T COG0156 260 YLRNRARPFIFSTALPPAVAAAALAALRI----LEEGPERRERLQELAAFFRSLLKAL-GLVLLPSESPI-IPVILGDEE 333 (388)
T ss_pred HHHHhCCceeccCCCCHHHHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHHHhc-CCccCCCCCCe-eeeEeCCHH
Confidence 99876555443 3455555556666664 2233456666777777777555554 66554444444 444554321
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~---~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
.+.++...|+++ ||.+.+..+...+ ..+|++++. ++++|+.+++.|.++
T Consensus 334 -----------~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 334 -----------RALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----------HHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 577888888888 9999886654433 589999987 999999999988764
No 183
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=2.2e-23 Score=204.67 Aligned_cols=306 Identities=20% Similarity=0.289 Sum_probs=206.6
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 187 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~ 187 (470)
.++.++++.+.+..+.. + |..++++++.+++.+..| .+++++|+|+++++.+++.++ ++|||+|++++++
T Consensus 10 ~~~e~~a~~~~~~~~~~-~----~~g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t 80 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL-S----GDGPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (376)
T ss_pred CHHHHHHHHHHHHcCCc-c----CCcHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 45567788888766432 1 224677888888877654 368999999999999999887 7999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEe
Q 012124 188 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267 (470)
Q Consensus 188 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~D 267 (470)
|+.+...+...|++++.++++++ ++.+|++.+++++++++++|+ |+||+|...+ +++|.++|++| |++||+|
T Consensus 81 ~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~-~i~vIeD 152 (376)
T TIGR02379 81 FVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKH-QLFVIED 152 (376)
T ss_pred cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHC-CCEEEEE
Confidence 99999999999999999999854 477999999999998999886 6778999998 77999999999 9999999
Q ss_pred ccccccc-cCCCCcccccccCCCCCceEEEeccC----cccccccceeeEEEcC-HHHHHHHHHHhhhc-----------
Q 012124 268 EIYEHII-YAPATHTSFASLPGMWERTLTVNGFS----KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF----------- 330 (470)
Q Consensus 268 d~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~s----K~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~----------- 330 (470)
++|+.+. |.+.. +..+ ..+++|| |.+. +|.+.|+++.+ +++.++++.++...
T Consensus 153 aa~~~g~~~~~~~---~g~~-------~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 221 (376)
T TIGR02379 153 AAQGVMSTYKGRA---LGSI-------GHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEV 221 (376)
T ss_pred CccccCCccCCcc---cCCC-------CCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCC
Confidence 9998754 44321 1111 2244555 8885 88889998876 78888887665421
Q ss_pred ----------cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC--C-Ceec--CCC--ce-EEEe
Q 012124 331 ----------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE--G-VKMS--EPQ--GA-FYLF 392 (470)
Q Consensus 331 ----------~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g-~~~~--~~~--~g-~~~~ 392 (470)
++-.+.+....+...|+. .++..++.++.++... +.|.+++ + +.+. ++. .. ++++
T Consensus 222 ~~~~~~~~g~n~~~~~~~Aa~g~~qL~~---l~~~~~~r~~~~~~y~----~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (376)
T TIGR02379 222 DKYTWRDIGSSYLPSELQAAYLWAQLEQ---ADRINQDRLATWQLYQ----DALKPLEEKGIIELPSIPNGCQHNAHMFY 294 (376)
T ss_pred CcceeeeecccCCccHHHHHHHHHHHHH---hHHHHHHHHHHHHHHH----HHhccCCcCCeeeCCCCCCCCeeeeEEEE
Confidence 111222322222233332 2444444444444444 4443332 1 1211 111 12 2335
Q ss_pred eeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC----C------CC--C----------CCcEEEEeec--CHH
Q 012124 393 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD----A------FG--D----------DTCIRISYAA--SLT 448 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~----~------f~--~----------~~~iRls~~~--~~~ 448 (470)
+.++... +-+++.+.|.++ ||.+.++. . |. . ...+.|-+.. +++
T Consensus 295 i~~~~~~-----------~r~~l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~ 362 (376)
T TIGR02379 295 IKLKDED-----------DRNELIKYLKEQ-EIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKE 362 (376)
T ss_pred EEECCcC-----------CHHHHHHHHHHC-CCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHH
Confidence 6665421 567888888765 89876422 1 10 0 1246665554 889
Q ss_pred HHHHHHHHHHHHH
Q 012124 449 TLQAAVERIKKGL 461 (470)
Q Consensus 449 ~i~~~l~~l~~~l 461 (470)
+++..++.|++++
T Consensus 363 ~~~~i~~~i~~~~ 375 (376)
T TIGR02379 363 DQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 184
>PRK07505 hypothetical protein; Provisional
Probab=99.93 E-value=2.5e-23 Score=207.60 Aligned_cols=334 Identities=14% Similarity=0.112 Sum_probs=210.4
Q ss_pred cCCCeEEccCCCC-CCCChHHHHHHHHHHHHcCC-CCCCCC--cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 92 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGF-TRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~-~~y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+|+.++||+.+.+ .+..++++.+++.+++.+.. ..+... ....+..+.+++.+.+..|. +.++.++| .++.
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~~~~~~sG-~~a~ 118 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA----SVLTFTSC-SAAH 118 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC----CEEEECCh-HHHH
Confidence 5778899977542 23458999999999987521 121111 12234455555555544442 44555555 5667
Q ss_pred HHHHHHhc----CCCC-eEEEcCCCCCChH---HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCC
Q 012124 168 LQAVLAVC----SPGD-EVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 239 (470)
Q Consensus 168 ~~~~~~l~----~~gd-~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nP 239 (470)
..++..+. .+|+ .|++.+..|++.. ......+.+++.+|. .|++.++++++++++++++++|+||
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl~~p~~~ 191 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYVADGVYS 191 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEEEecccc
Confidence 66665432 2232 3656666665432 112224567777775 3889999998777889999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCC-CCCceEEEeccCcccccccceeeEEE-cC
Q 012124 240 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIA-GP 316 (470)
Q Consensus 240 tG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~-~~~~~i~i~S~sK~~~~~G~r~G~~~-~~ 316 (470)
||.+++ +++|.++|+++ ++++|+||+|+...++..... ....+.. ..+++++++||||.++.+| ||++ .+
T Consensus 192 ~G~~~~---~~~i~~l~~~~-~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~ 264 (402)
T PRK07505 192 MGGIAP---VKELLRLQEKY-GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD 264 (402)
T ss_pred cCCcCC---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence 999999 78888999999 999999999865444322111 1112221 3578999999999998665 8877 47
Q ss_pred HHHHHHHHHHhhhccCC--CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeee
Q 012124 317 KHFVAACNKIQSQFTSG--ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 394 (470)
Q Consensus 317 ~~~~~~l~~~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~ 394 (470)
+++++.+......++++ ++++...++.+.++.- .++++.+.++.++++.+.+.+.+... . .....++.++.
T Consensus 265 ~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~----~-~g~~~~i~~~~ 337 (402)
T PRK07505 265 AEQIELILRYAGPLAFSQSLNVAALGAILASAEIH--LSEELDQLQQKLQNNIALFDSLIPTE----Q-SGSFLPIRLIY 337 (402)
T ss_pred HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHhc----C-CCCCCCEEEEE
Confidence 88888887765554443 4456777766666510 12334444555555555443332111 0 11111222333
Q ss_pred ccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 395 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
++... +..++.++|+++ ||.+.++..+.. ++++|+++.. +++++++++++|++++++
T Consensus 338 ~~~~~-----------~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 338 IGDED-----------TAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred eCCHH-----------HHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 33210 356788888865 999998743332 2589999985 999999999999998764
No 185
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.93 E-value=6.7e-24 Score=212.12 Aligned_cols=350 Identities=13% Similarity=0.045 Sum_probs=220.6
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+ +.......+.+..+++.+.+..+. ...+.+++++++++|++
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~e 108 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTH-TCFMVTPYEGYVALAEKLNRIAPG-SGPKKSVFFNSGAEAVE 108 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccC-ccccccCChHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHHH
Confidence 67788999888633 233 78899999999876321 111112234455566666543321 12368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcCCC---------CCccCHHhHhhh
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISE---------NFLLDPKVLESK 223 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~---------~~~~d~~~l~~~ 223 (470)
.+++... ....+|+...-+|++....+... |- .+..+|..... .+.-+++.+++.
T Consensus 109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
T TIGR00700 109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI 188 (420)
T ss_pred HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence 9888642 22357888888999876543332 11 11222221000 000124566665
Q ss_pred cc-----CCceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEe
Q 012124 224 LT-----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 297 (470)
Q Consensus 224 l~-----~~~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 297 (470)
+. +++.+|++...+.-+|..+ +.+.+++|.++|++| |+++|+||+|.+|.+.+. ...+... +....+.
T Consensus 189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tg~gr~g~-~~a~~~~----~~~pDi~ 262 (420)
T TIGR00700 189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH-GIVFIADEVQTGFARTGA-MFACEHE----GPEPDLI 262 (420)
T ss_pred HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEecccCCcccch-hHHHhhc----CCCCCEE
Confidence 52 3566777755576788866 555599999999999 999999999999866543 1122212 2223356
Q ss_pred ccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhc---CCCChHHHHHHHHHHHHHHHHHHHHh
Q 012124 298 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL---GYAGGEVVSKMVKAFRERRDFLVKSF 374 (470)
Q Consensus 298 S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~L 374 (470)
+|||.++ +|+|+||+++++++++.+.......+++.+++.|.++.+.|+. +.+ .++++++.+.++ +.+.+..
T Consensus 263 ~lsK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~-~~~~~~~g~~l~---~~L~~l~ 337 (420)
T TIGR00700 263 TTAKSLA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGL-IERARQIGRLVT---DRLTTLK 337 (420)
T ss_pred Eeecccc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH---HHHHHHH
Confidence 7999998 9999999999999998886555567888999999999777642 211 233333333333 3333333
Q ss_pred ccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHH
Q 012124 375 GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQA 452 (470)
Q Consensus 375 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~ 452 (470)
.+++.+....+. |+++|+.+.+... ..........+.+.+.+ .||.+.|+..|+ +++||+++. +++++++
T Consensus 338 ~~~~~~~~vrg~-G~~~~i~~~~~~~----~~~~~~~~~~l~~~~~~-~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l~~ 409 (420)
T TIGR00700 338 AVDPRIGDVRGL-GAMIAVELVDPGT----TEPDAGLAERIATAAHA-AGLLLLTCGMFG--NIIRFLPPLTIGDELLSE 409 (420)
T ss_pred hhCCCEEEeecc-ceEEEEEEecCCC----CCccHHHHHHHHHHHHH-CCeEEeccCCCC--CEEEEECCCCcCHHHHHH
Confidence 334444444444 6668887732100 00000013455555555 599999987774 799999864 8999999
Q ss_pred HHHHHHHHHH
Q 012124 453 AVERIKKGLL 462 (470)
Q Consensus 453 ~l~~l~~~l~ 462 (470)
++++|+++++
T Consensus 410 ~~~~l~~~l~ 419 (420)
T TIGR00700 410 GLDILCAILA 419 (420)
T ss_pred HHHHHHHHhh
Confidence 9999999874
No 186
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.93 E-value=5.7e-23 Score=204.20 Aligned_cols=333 Identities=13% Similarity=0.159 Sum_probs=226.9
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+.+|. ..+.. +|.+.+++.+++.+... .+. ....+....+++.+.+..+ .+.+++++++++|..
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~-~~~-~~~~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e 106 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH-IGN-GYTNEPVLRLAKKLVDATF----ADKVFFCNSGAEANE 106 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccc-ccC-ccCCHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHH
Confidence 577889998873 33333 89999999999875211 111 1123455666666665433 369999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHH-HHHcCCE------------EEEecCcCCCCCccCHHhHhhhccCC
Q 012124 169 QAVLAVC-------SPG-DEVIIPAPFWVSYPEM-ARIADAT------------PVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 169 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~-~~~~g~~------------~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
.+++... .+| +.|+..+-+|++.... +...+.. +..+|. .|++.+++.+.++
T Consensus 107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 179 (397)
T TIGR03246 107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK 179 (397)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhccC
Confidence 9998752 123 5778888888886543 3333321 122221 3889999999888
Q ss_pred ceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc
Q 012124 228 SRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
+++|++...+++.|... +.+.+++|.++|++| |+++|.||+|..+...+... ....+ +...-+-+|||.++ +
T Consensus 180 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~Gr~G~~~-a~~~~----gv~pDi~t~~K~lg-g 252 (397)
T TIGR03246 180 TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH-NALLIFDEVQTGVGRTGELY-AYMHY----GVTPDILTSAKALG-G 252 (397)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcCCccccch-hhhhc----CCCCCEEEeehhhh-C
Confidence 88888886677777654 899999999999999 99999999998764443211 11111 11122448999998 8
Q ss_pred cceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---C-Cee
Q 012124 307 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---G-VKM 382 (470)
Q Consensus 307 G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g-~~~ 382 (470)
|+++||+++++++++.+.......+++.+++.+.++.+.|+.- + ..++.+.++++.+++.+.|+++. + +..
T Consensus 253 G~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~---~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~ 327 (397)
T TIGR03246 253 GFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLV---N--TPELLAGVKQRHDLFVDGLEKINARYNVFSE 327 (397)
T ss_pred CcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHH---h--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEe
Confidence 9999999999999888865444456678899999988888741 1 23466777788888888887651 1 112
Q ss_pred cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHH
Q 012124 383 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKG 460 (470)
Q Consensus 383 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~ 460 (470)
... .|.++.+.+.+... .....+++.|+++ ||.+.+.. .+++|++.+ .+++++++++++|.++
T Consensus 328 vrg-~G~~~~i~~~~~~~---------~~~~~~~~~l~~~-Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~ 392 (397)
T TIGR03246 328 IRG-KGLLIGAVLTEAYQ---------GKAKQFVNAAAEE-GVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERA 392 (397)
T ss_pred eec-CceEEEEEEcCchh---------hHHHHHHHHHHHC-CeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 222 34445555532100 1456788888766 88887631 368999654 4999999999999999
Q ss_pred HHhh
Q 012124 461 LLTL 464 (470)
Q Consensus 461 l~~~ 464 (470)
++++
T Consensus 393 l~~~ 396 (397)
T TIGR03246 393 IEQV 396 (397)
T ss_pred HHHh
Confidence 8753
No 187
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.93 E-value=5e-23 Score=207.38 Aligned_cols=354 Identities=14% Similarity=0.109 Sum_probs=222.6
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+..+.. ...-..+....+++.|....+.. ..+.+++++++++|.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e 129 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTG-FNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVE 129 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcc-ccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHH
Confidence 67789999888643 333 7889999999987632211 11122456677777776544311 1258999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcCC--CCCccC--------HHhHhh
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRIS--ENFLLD--------PKVLES 222 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~--~~~~~d--------~~~l~~ 222 (470)
.+++... .....|+....+|++........ |. .+..+|.... ...++. ++.+++
T Consensus 130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 9988642 22357888888999877544332 21 1222222110 000111 123333
Q ss_pred hc----c-CCceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEE
Q 012124 223 KL----T-EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 296 (470)
Q Consensus 223 ~l----~-~~~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i 296 (470)
.+ . +++.+|++...+.-.|.++ +.+.+++|.++|++| |+++|+||+|.+|.+.+. ..++..++...+ +
T Consensus 210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~-gillI~DEV~tg~gr~g~-~~a~~~~~v~pD----i 283 (451)
T PRK06918 210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH-GILFVADEIQTGFARTGK-YFAIEHFDVVPD----L 283 (451)
T ss_pred HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCcCccCc-eehhHhcCCCCC----E
Confidence 32 2 2444555533344457644 566699999999999 999999999999876553 223333332112 5
Q ss_pred eccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHh---cCCCChHHHHHHHHHHHHHHHHHHHH
Q 012124 297 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG---LGYAGGEVVSKMVKAFRERRDFLVKS 373 (470)
Q Consensus 297 ~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~ 373 (470)
.||||.++ +|+|+||+++++++++.+.......+++.+++.|.++.+.|+ .+.+ .++++++.+.+.++.+.+.+
T Consensus 284 ~t~sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~-~~~~~~~g~~l~~~l~~l~~- 360 (451)
T PRK06918 284 ITVSKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENL-NDRAIELGKVVMNRFEEMKN- 360 (451)
T ss_pred Eeeehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHh-
Confidence 58999998 999999999999999888655566778899999999766665 3322 44555555555554444433
Q ss_pred hccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHH
Q 012124 374 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 451 (470)
Q Consensus 374 L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~ 451 (470)
+.+.+....+.|+++.|....+... ..........+.+.+.+ .||.+.|+..|+ +++|++++. ++++|+
T Consensus 361 --~~~~~~~vrg~G~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~Gvlv~~~~~~~--~~lrl~p~l~~t~~~id 431 (451)
T PRK06918 361 --KYNCIGDVRGLGAMCAFELVQDRKT----KEPDKTLTANICKEANK-RGLLLLSAGTYG--NVIRVLMPLVITDEQLE 431 (451)
T ss_pred --hCCCceeeccceeEEEEEEccCCCc----CCCcHHHHHHHHHHHHH-CCeEEeecCCCC--CEEEEECCCccCHHHHH
Confidence 2333333445677776644311100 00000023455665555 599999986663 789999864 899999
Q ss_pred HHHHHHHHHHHhhC
Q 012124 452 AAVERIKKGLLTLR 465 (470)
Q Consensus 452 ~~l~~l~~~l~~~~ 465 (470)
+++++|+++++++.
T Consensus 432 ~~l~~l~~~l~~~~ 445 (451)
T PRK06918 432 EGLTIIEESLQACY 445 (451)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 188
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=6e-23 Score=202.79 Aligned_cols=214 Identities=16% Similarity=0.195 Sum_probs=164.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~ 208 (470)
..+|++.+++++ | .+++++++|+++|+..++.+++++||+|+++++.|.+... .+...|++++.++++
T Consensus 63 ~~~le~~la~l~----g----~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 134 (390)
T PRK08133 63 VTMFQERLAALE----G----AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT 134 (390)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence 456777777764 3 3578999999999999999999999999999999987654 456789999999862
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
|++.+++++++++++|++++|+||||.+++ +++|+++|+++ |++||+|++|....+. .++ .
T Consensus 135 -------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~-gi~livD~t~~~~~~~----~pl-~--- 195 (390)
T PRK08133 135 -------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAA-GALLVVDNCFCTPALQ----QPL-K--- 195 (390)
T ss_pred -------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-h---
Confidence 789999999999999999999999999998 88999999999 9999999998753321 111 1
Q ss_pred CCCceEEEeccCccccccccee-eEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 367 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (470)
.+..+++.|+||.++.+|.++ ||+++++++++.+...........+++.+.. ++.. -+.+..+.+++.+++
T Consensus 196 -~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~g----l~tl~~R~~~~~~~a 267 (390)
T PRK08133 196 -LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWV---FLKG----LETLSLRMEAHSANA 267 (390)
T ss_pred -hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHH---HHcc----cchHHHHHHHHHHHH
Confidence 233588999999998788887 6777888888877766555555555554333 3332 224555556666788
Q ss_pred HHHHHHhccCCCCe
Q 012124 368 DFLVKSFGELEGVK 381 (470)
Q Consensus 368 ~~l~~~L~~~~g~~ 381 (470)
..+.+.|++.|++.
T Consensus 268 ~~la~~L~~~p~v~ 281 (390)
T PRK08133 268 LALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHhCCCee
Confidence 88888888876653
No 189
>PRK06460 hypothetical protein; Provisional
Probab=99.93 E-value=7.1e-23 Score=201.28 Aligned_cols=217 Identities=13% Similarity=0.185 Sum_probs=163.7
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCC----hHHHHHHcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~ 204 (470)
......+|++.++++.. . ...+++ +++++++..++.++++|||+|++++|.|.+ +...++..|+++..
T Consensus 43 ~~p~~~~L~~~lA~l~g----~---~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 43 ANPTVLELTKKIVELEN----A---EMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred CCccHHHHHHHHHHHhC----C---CcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 34577889999999863 2 234555 555689999999999999999999876643 44567789999988
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++.+ +.+.+++.+++++++|++++|+||||.+++ +++|+++|+++ |++||+|++|.... ...
T Consensus 115 ~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~-g~~vivDea~~~~~-------~~~ 176 (376)
T PRK06460 115 SNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKEN-GSILIVDATFSTPI-------NQK 176 (376)
T ss_pred ECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCcCccc-------cCC
Confidence 8753 224455556778999999999999999999 56789999999 99999999997531 111
Q ss_pred ccCCCCCceEEEeccCcccc-cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
.+. .+.++++.|+||.++ ..+.++||+++++++++.+.+.+..++.+.++.. +..++.. .++++.+.++.
T Consensus 177 ~l~--~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~---a~~~l~~----~~~l~~r~~~~ 247 (376)
T PRK06460 177 PLE--LGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHA---AYLTLRG----IKTLKIRMDVI 247 (376)
T ss_pred hhh--cCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHH---HHHHHhc----hhhHHHHHHHH
Confidence 121 245699999999984 2236799999999999999888777766666532 3333442 56777888888
Q ss_pred HHHHHHHHHHhccCCCC
Q 012124 364 RERRDFLVKSFGELEGV 380 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~ 380 (470)
.++++.+.+.|++.|.+
T Consensus 248 ~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 248 NRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 99999999999877654
No 190
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.93 E-value=3.7e-23 Score=204.31 Aligned_cols=285 Identities=15% Similarity=0.168 Sum_probs=195.4
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~ 204 (470)
+.+-..+|++.++++. | . +..+++++++.++..++.+++++||+|++++|.|......+. ..|+++..
T Consensus 59 ~~pt~~~Le~~lA~l~----G---~-~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~ 130 (386)
T PRK06767 59 GNPTVKLFEERMAVLE----G---G-EEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSF 130 (386)
T ss_pred CCcchHHHHHHHHHHh----C---C-CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEE
Confidence 3445678888888886 3 2 234555555679999999999999999999999987665543 34665555
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|....+. .++.
T Consensus 131 ~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~----~pl~ 195 (386)
T PRK06767 131 CDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRN-GLLVIVDNTFCSPYLQ----RPLE 195 (386)
T ss_pred eCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cchh
Confidence 543 3889999999889999999999999999999 78889999999 9999999999743221 1111
Q ss_pred ccCCCCCceEEEeccCccccccccee-eEEEcCHHHHHHHHH-HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNK-IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~~G~r~-G~~~~~~~~~~~l~~-~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
.+..+++.|+||.++.+|.++ ||++++++++..+.+ .........+++.+.++...|+ .+..+.++
T Consensus 196 -----~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~-------tl~~r~~~ 263 (386)
T PRK06767 196 -----LGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK-------TLAVRMDR 263 (386)
T ss_pred -----cCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHHHHHHH
Confidence 233488899999997678885 999999988877643 3333444456665544333332 23445567
Q ss_pred HHHHHHHHHHHhccCCCCee-cCC-----------CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC
Q 012124 363 FRERRDFLVKSFGELEGVKM-SEP-----------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 430 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~~~-~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg 430 (470)
.+++.+.+.+.|+++|++.. ..| .+|+ +.+++.+.. ++..+|.++|. ..++.+.-|
T Consensus 264 ~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~-vsf~l~~~~----------~~~~~f~~~l~-~~~~~~s~G 331 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGV-ISFSIKGGK----------EETQAFINDLH-FITIAVSLG 331 (386)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCce-EEEEEcCCH----------HHHHHHHHhCC-ccEEecCCC
Confidence 78889999999999988763 322 3455 444664210 14567887764 346655555
Q ss_pred CCCC-----------------------CCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012124 431 DAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 431 ~~f~-----------------------~~~~iRls~~~~~~~i~~~l~~l~~~l~ 462 (470)
.... .++.+|||++.. +.+..++.|.++++
T Consensus 332 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~ 384 (386)
T PRK06767 332 DTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALK 384 (386)
T ss_pred CcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 3321 025799999983 24445555555554
No 191
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=7.2e-23 Score=202.24 Aligned_cols=217 Identities=17% Similarity=0.194 Sum_probs=165.2
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 204 (470)
+.+-..+|++.++++. | .++.++++++++++..++.+++++||+|+++.|+|.+... .+...|++++.
T Consensus 62 ~~p~~~~le~~lA~l~----g----~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 62 TNPTVQAFEEKVRILE----G----AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred CChHHHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 3345577888888875 3 2456777777899999999999999999999999987654 34567888877
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++ |++||+|++|...... .++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~-gi~livD~t~a~~~~~----~~l- 197 (398)
T PRK08249 134 CET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKV-GALVVVDNTFATPINQ----NPL- 197 (398)
T ss_pred cCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCcCccccC----Cch-
Confidence 653 5899999999999999999999999999999 77899999999 9999999999864322 111
Q ss_pred ccCCCCCceEEEeccCccccccccee-eEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~~G~r~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
.. +..+++.|+||.++.+|.++ ||+++++++++.+...+.....+.+++.+..+...++. +....++.
T Consensus 198 ~~----~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-------L~~R~~~~ 266 (398)
T PRK08249 198 AL----GADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKT-------LKLRVRQQ 266 (398)
T ss_pred hh----CCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-------HHHHHHHH
Confidence 11 23378899999997556665 77888999999998877766667777766655544432 33444555
Q ss_pred HHHHHHHHHHhccCCCC
Q 012124 364 RERRDFLVKSFGELEGV 380 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~ 380 (470)
.++++.+.+.|++.|.+
T Consensus 267 ~~na~~la~~L~~~p~v 283 (398)
T PRK08249 267 QESAMALAKYLQTHPKV 283 (398)
T ss_pred HHHHHHHHHHHHcCCCe
Confidence 67777777888776544
No 192
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=1.5e-22 Score=199.08 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=170.7
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCC
Q 012124 125 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADA 200 (470)
Q Consensus 125 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~ 200 (470)
.+| +.+....|+++++++. | .+++++++|+++++..++.++++|||+|++++|+|++....+. ..|.
T Consensus 47 ~R~-~~pt~~~L~~~lA~l~----g----~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 47 SRR-GNPTRDVVQRALAELE----G----GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred eCC-CCccHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 445 4445678888888875 3 2469999999999999999999999999999999997554333 2344
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 280 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~ 280 (470)
++..++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ |++||+|++|....+.
T Consensus 118 ~v~~vd~-------~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~-g~~vivDeay~~~~~~---- 182 (386)
T PRK08045 118 RVLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREA-GAVSVVDNTFLSPALQ---- 182 (386)
T ss_pred EEEEeCC-------CCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCccccC----
Confidence 6555531 5899999999889999999999999999999 77889999999 9999999999764321
Q ss_pred ccccccCCCCCceEEEeccCcccc-cccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHH
Q 012124 281 TSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 358 (470)
Q Consensus 281 ~~~~~~~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 358 (470)
.++ .+ +..+++.|++|.++ .++.+.|++++ ++++++.+.........+.+++.+..+...|+. +..
T Consensus 183 ~pl-~~----gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-------l~~ 250 (386)
T PRK08045 183 NPL-AL----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVP 250 (386)
T ss_pred Cch-hh----CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc-------HHH
Confidence 122 11 22489999999984 46677999876 678888888777778888999988877777763 455
Q ss_pred HHHHHHHHHHHHHHHhccCCCC
Q 012124 359 MVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 359 ~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
+.++..+++..+.+.|++.|.+
T Consensus 251 R~~~~~~na~~la~~L~~~p~v 272 (386)
T PRK08045 251 RMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_pred HHHHHHHHHHHHHHHHHcCCCE
Confidence 6666677778888888877654
No 193
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.92 E-value=1.2e-22 Score=199.65 Aligned_cols=221 Identities=14% Similarity=0.181 Sum_probs=165.9
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcC
Q 012124 124 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IAD 199 (470)
Q Consensus 124 ~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g 199 (470)
..+| +..-..+|++.++++. | .+++++++|+++++.+++.+++++||+|++++|+|.+....+. ..|
T Consensus 45 Y~R~-~~p~~~~le~~lA~l~----g----~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRS-GNPTRDLLQQALAELE----G----GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCC-CCchHHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 3445 3445678888888875 2 3689999999999999999999999999999999987655433 234
Q ss_pred CEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCC
Q 012124 200 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 279 (470)
Q Consensus 200 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~ 279 (470)
.++..++. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++ |++||+|++|....+.
T Consensus 116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~~--- 181 (382)
T TIGR02080 116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAV-GAVVVVDNTFLSPALQ--- 181 (382)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCcccccC---
Confidence 55554431 3889999999889999999999999999999 77889999999 9999999999764322
Q ss_pred cccccccCCCCCceEEEeccCcccc-cccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHH
Q 012124 280 HTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 357 (470)
Q Consensus 280 ~~~~~~~~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 357 (470)
.++ .+ +..++++|+||.++ .++++.|++++ ++++++++...+...+.+.+++.+..+..-++ .+.
T Consensus 182 -~pl-~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~-------tl~ 248 (382)
T TIGR02080 182 -NPL-AL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR-------TLV 248 (382)
T ss_pred -Cch-hh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc-------hHH
Confidence 122 11 22488999999884 46789999876 67888888888777777788887655533332 233
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 012124 358 KMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 358 ~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
.+.++..++...+.+.|++.|.+
T Consensus 249 ~R~~~~~~na~~~a~~L~~~p~v 271 (382)
T TIGR02080 249 ARMRLQQRNAQAIVEYLQTQPLV 271 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCe
Confidence 33455567777777788766544
No 194
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.92 E-value=1.1e-23 Score=206.72 Aligned_cols=307 Identities=18% Similarity=0.165 Sum_probs=211.9
Q ss_pred CChHHHHHHHHHHHHcCCCCCC---CCcC------cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc--
Q 012124 107 DTPVLIAEAGINAIREGFTRYT---PNAG------TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-- 175 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~~~~~y~---~~~g------~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~-- 175 (470)
++|+.+.+++.+.+........ ...+ ..++|+.++++ .| +++++|++|+|+++++..++..+.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~g--~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEA----LG--ADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHH----hC--CCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 3578889998888754221111 1111 23455555555 45 467899999999999999988875
Q ss_pred --CCC-CeEEEcCCCCCChHH---HHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHH
Q 012124 176 --SPG-DEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 249 (470)
Q Consensus 176 --~~g-d~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~ 249 (470)
.+| +.|++....|+.+.. .++..|++++.++.+. ++.+|++.++++++++++++++++++||||..++ +
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 356 788888777776544 3456799999999864 3458999999999888999999999999999999 7
Q ss_pred HHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHH--HHH-
Q 012124 250 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC--NKI- 326 (470)
Q Consensus 250 ~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l--~~~- 326 (470)
++|.++|+++ |+++|+|++++.... ...+ .. .+-.+++.|++|.+|.+| +|+++++++..... ...
T Consensus 158 ~~I~~l~~~~-~~~~ivD~a~~~g~~----~~~~---~~-~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~ 226 (353)
T TIGR03235 158 REIAEVLEAH-EAFFHVDAAQVVGKI----TVDL---SA-DRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIM 226 (353)
T ss_pred HHHHHHHHHc-CCEEEEEchhhcCCc----cccc---cc-cCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCcee
Confidence 8999999999 999999999874221 1122 11 245588889999887445 79998887643221 100
Q ss_pred ------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc---eEEEeeeccC
Q 012124 327 ------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFST 397 (470)
Q Consensus 327 ------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~ 397 (470)
.......++.....++.++++. .....++++++++++++++.+.|++ +|+++..+.. ...+.+.+++
T Consensus 227 ~~~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~ 302 (353)
T TIGR03235 227 FGGGQERGLRPGTLPVHLIVGMGEAAEI---ARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG 302 (353)
T ss_pred eCCCCcCccccCCCChHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC
Confidence 0111233455555566666654 2345678889999999999999988 5887764322 1123344443
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC----CcEEEEeecCHHHHHHH
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD----TCIRISYAASLTTLQAA 453 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~----~~iRls~~~~~~~i~~~ 453 (470)
. +..++.+.| ++ +|.+.+|..|... .++|.+++.+++++..+
T Consensus 303 ~------------~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 303 V------------NSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred c------------CHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 2 667788777 45 8999999988643 36888888766555443
No 195
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=2.7e-22 Score=198.39 Aligned_cols=213 Identities=15% Similarity=0.178 Sum_probs=160.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 208 (470)
..+|++.++++ .|. ++++ +++++++++.+++.++++|||+|+++.|+|.+.. ..++..|.+++.++.
T Consensus 62 ~~~Le~~lA~l----~g~---~~~v-~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~- 132 (405)
T PRK08776 62 RDLLGEALAEL----EGG---AGGV-ITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL- 132 (405)
T ss_pred HHHHHHHHHHH----hCC---CceE-EEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-
Confidence 34566666655 342 3455 5555579999999999999999999999998743 445567888888875
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.|++.+++++++++++|++++|+||||.+.+ +++|+++|+++ |++||+|++|.... ...++ .+
T Consensus 133 ------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~-gi~vIvD~a~a~~~----~~~pl-~~-- 195 (405)
T PRK08776 133 ------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKV-GALTVVDNTFLSPA----LQKPL-EF-- 195 (405)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCCcccc----cCCcc-cc--
Confidence 3889999999889999999999999999977 88999999999 99999999997521 11222 12
Q ss_pred CCCceEEEeccCcccccc-cceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMT-GWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~-G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
+..+++.|.+|.++.+ ++..|+++. ++++.+++.........+.+++.+.++...+ ++++.+.++..++
T Consensus 196 --gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-------~tl~~r~~~~~~n 266 (405)
T PRK08776 196 --GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL-------RTLDARLRVHQEN 266 (405)
T ss_pred --cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-------CcHHHHHHHHHHH
Confidence 3348999999999644 467898876 5778888877666666667887766655433 4566777777888
Q ss_pred HHHHHHHhccCCCC
Q 012124 367 RDFLVKSFGELEGV 380 (470)
Q Consensus 367 ~~~l~~~L~~~~g~ 380 (470)
...+.+.|++.|.+
T Consensus 267 a~~la~~L~~~p~v 280 (405)
T PRK08776 267 ADAIAALLDGHAAV 280 (405)
T ss_pred HHHHHHHHHcCCCe
Confidence 88888888876654
No 196
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.92 E-value=3.7e-23 Score=207.04 Aligned_cols=350 Identities=15% Similarity=0.181 Sum_probs=226.2
Q ss_pred cCCCeEEccCCCCCC---CChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDF---DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~---~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.+.. ..++.+.+++.+++.+....|.+..+..+|.+.+++.+ . ..+.+++++++++|++
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA~e 120 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEATM 120 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHHHH
Confidence 577899999987553 24889999999999875444445444455555555442 2 3468999999999999
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHc-CCE------------EEEecCcCCCCCccCHHhHhhhcc---CCceE
Q 012124 169 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIA-DAT------------PVILPTRISENFLLDPKVLESKLT---EKSRL 230 (470)
Q Consensus 169 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~ 230 (470)
.+++.... .++.|+..+++|+++...+... |.. .+.++.....-...|++.+++.+. +++.+
T Consensus 121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa 200 (426)
T PRK00062 121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAA 200 (426)
T ss_pred HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEE
Confidence 99987543 3578999999999987443321 110 000000000000027888888774 35667
Q ss_pred EEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccce
Q 012124 231 LILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 309 (470)
Q Consensus 231 i~l~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r 309 (470)
|++...+..+|...+ .+.+++|.++|++| |+++|.||+|..+.+++..........+ + +.+|||.++ .|++
T Consensus 201 iivEpv~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~G~r~g~~~~~~~~~~~p--D----i~~~gK~l~-~G~p 272 (426)
T PRK00062 201 VIVEPVAGNMGVVPPKPGFLEGLRELCDEH-GALLIFDEVMTGFRVALGGAQGYYGVTP--D----LTTLGKIIG-GGLP 272 (426)
T ss_pred EEEeCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeechhccccCCccHHHHhCCCc--c----hHhhhhHhh-CCCc
Confidence 777544445887775 88899999999999 9999999999987554321111122222 2 568999998 8999
Q ss_pred eeEEEcCHHHHHHHHH---HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-cCC
Q 012124 310 LGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEP 385 (470)
Q Consensus 310 ~G~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~ 385 (470)
+|++++++++++.+.. .....+++.+++.+.++.+.|+.-.. ++..++.++.....++.+.+.+++. ++.. ..+
T Consensus 273 ~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~vrg 350 (426)
T PRK00062 273 VGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEALTKRLAEGLKEAAKKA-GIPLTVNR 350 (426)
T ss_pred ceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHc-CCceEEEE
Confidence 9999999999988852 22334567899999999888874221 3455666666666666666555555 4433 223
Q ss_pred CceEEEeeeccCccCCcc-cCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 386 QGAFYLFIDFSTYYGSEA-EGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
.+.| +-+.+........ .... .......+...|.++ ||.+.|.. .+.+++++..+++++++++++|++++++
T Consensus 351 ~G~~-~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 351 VGSM-FGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ----FEAGFVSAAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred ecce-EEEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC----cCceeeeccCCHHHHHHHHHHHHHHHHh
Confidence 4444 4444432100000 0000 000135677777765 99998742 2467888777999999999999999876
Q ss_pred h
Q 012124 464 L 464 (470)
Q Consensus 464 ~ 464 (470)
+
T Consensus 425 ~ 425 (426)
T PRK00062 425 L 425 (426)
T ss_pred h
Confidence 4
No 197
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=2.3e-22 Score=198.43 Aligned_cols=311 Identities=18% Similarity=0.261 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCCC
Q 012124 110 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 188 (470)
Q Consensus 110 ~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y 188 (470)
+.-.+++.+.+..+. .| |..++++++++++++.+|. +++++++|+++++.+++..+ +++||+|+++.|+|
T Consensus 11 ~~~~~~~~~~l~~~~-~~----g~~~~~~~~e~~la~~~g~----~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~ 81 (375)
T PRK11706 11 GTELDYIQQAMSSGK-LC----GDGGFTRRCQQWLEQRFGS----AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (375)
T ss_pred HHHHHHHHHHHHcCC-cc----CCCHHHHHHHHHHHHHhCC----CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence 444667777776542 22 3346788888888776553 68999999999999887765 68999999999999
Q ss_pred CChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEec
Q 012124 189 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 268 (470)
Q Consensus 189 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd 268 (470)
+.+...+...|++++.++++++ ++.+|++.+++++++++++|+++ |+||...+ +++|.++|+++ |++||+|+
T Consensus 82 ~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~---~~~i~~la~~~-~i~vIeD~ 153 (375)
T PRK11706 82 VSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPV---HYAGVACE---MDTIMALAKKH-NLFVVEDA 153 (375)
T ss_pred HHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEe---CCCCCccC---HHHHHHHHHHc-CCEEEEEC
Confidence 9999999999999999999754 47799999999998899998865 47998877 78899999999 99999999
Q ss_pred cccccc-cCCCCcccccccCCCCCceEEEeccC--cccccccceeeEEEcCHHHHHHHHHHhhhc---------------
Q 012124 269 IYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPKHFVAACNKIQSQF--------------- 330 (470)
Q Consensus 269 ~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~s--K~~~~~G~r~G~~~~~~~~~~~l~~~~~~~--------------- 330 (470)
+|+.+. +.+. ++..+. .+.+.||+ |.++ +|.+.++++.++++.++++..+...
T Consensus 154 a~a~g~~~~~~---~~g~~~-----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 224 (375)
T PRK11706 154 AQGVMSTYKGR---ALGTIG-----HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYT 224 (375)
T ss_pred ccccccccCCe---eeecCc-----CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcce
Confidence 998765 3322 222221 13333443 9997 7888888988999998877665321
Q ss_pred --cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC--C-Ceec-CCC----ceEEEeeeccCccC
Q 012124 331 --TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE--G-VKMS-EPQ----GAFYLFIDFSTYYG 400 (470)
Q Consensus 331 --~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g-~~~~-~~~----~g~~~~~~~~~~~~ 400 (470)
..+.+...+...++.+.. .-+.+++..++.+++.+.+.+.|.+++ + +.+. .+. ...++|+.+++..
T Consensus 225 ~~~~g~~~~~~~~~aa~~~~---ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (375)
T PRK11706 225 WVDIGSSYLPSELQAAYLWA---QLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLE- 300 (375)
T ss_pred eeecccccCcCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcC-
Confidence 112332222222222111 023345555555666667777777664 2 3322 121 2334566665431
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCC----C------CC-----C-------CCcEEEEeec--CHHHHHHHHHH
Q 012124 401 SEAEGFGKIENSESLCRYLLDKAQVALVPGD----A------FG-----D-------DTCIRISYAA--SLTTLQAAVER 456 (470)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~----~------f~-----~-------~~~iRls~~~--~~~~i~~~l~~ 456 (470)
+..++.+.|.++ ||.+.... . ++ . ...+-|-+.. ++++++..++.
T Consensus 301 ----------~r~~l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~ 369 (375)
T PRK11706 301 ----------DRSALINFLKEA-GIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT 369 (375)
T ss_pred ----------CHHHHHHHHHHC-CCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence 577888888765 89765321 0 00 0 1235555554 78999999998
Q ss_pred HHHHH
Q 012124 457 IKKGL 461 (470)
Q Consensus 457 l~~~l 461 (470)
|++++
T Consensus 370 i~~~~ 374 (375)
T PRK11706 370 ILEFF 374 (375)
T ss_pred HHHHh
Confidence 88764
No 198
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.92 E-value=3.8e-22 Score=196.38 Aligned_cols=324 Identities=17% Similarity=0.149 Sum_probs=218.9
Q ss_pred CCeEEccCCC-CCCCChHHHHHHHHHHHHcCCCCC---CCCcCc----HHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 94 VSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRY---TPNAGT----LELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 94 ~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~y---~~~~g~----~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+++++|++++ ..+..++.++++..+++.+.-.+. .-..|. .+|.+.|++++ | .+..++.+++-.
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g----~e~all~sSGy~ 173 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K----KEDCLVCPTGFA 173 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C----CCcEEEECChHH
Confidence 4789999887 566778999999998887621111 123455 55666666665 3 245555555555
Q ss_pred HHHHHHHHh--------------cCCCCeEEEcCCCCCChHHHHHHc----CCEEEEecCcCCCCCccCHHhHhhhccC-
Q 012124 166 SILQAVLAV--------------CSPGDEVIIPAPFWVSYPEMARIA----DATPVILPTRISENFLLDPKVLESKLTE- 226 (470)
Q Consensus 166 al~~~~~~l--------------~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~- 226 (470)
+...++.+| ..++|.|+.+.-+|.+....++.. +++++.++. -|++.|++.++.
T Consensus 174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~ 246 (476)
T PLN02955 174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSC 246 (476)
T ss_pred HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHHHhC
Confidence 555566665 245678888888888888888876 577777774 288888888742
Q ss_pred --CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccc
Q 012124 227 --KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 304 (470)
Q Consensus 227 --~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~ 304 (470)
+.++|++...-++.|...+ +++|.++|++| |+++|+||+|+.+.++.........+.-..+..|+++||||.+|
T Consensus 247 ~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~-ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G 322 (476)
T PLN02955 247 KMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKY-GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAG 322 (476)
T ss_pred CCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchh
Confidence 3445555555889999999 88888899999 99999999999888765433333333222477899999999998
Q ss_pred cccceeeEEEcCHHHHHHHHHHhhhccCCC--ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee
Q 012124 305 MTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 382 (470)
Q Consensus 305 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 382 (470)
..| ||+++++++++.+......+.+++ ++....++.+.++.. ..-...++.++++.+++.+.+ |+.+
T Consensus 323 ~~G---Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~----~~~~~~r~~L~~n~~~fr~~~----G~~~ 391 (476)
T PLN02955 323 CHG---GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVA----RKEKWRRKAIWERVKEFKALS----GVDI 391 (476)
T ss_pred ccC---ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHhc----CCCC
Confidence 666 999999999998886655544433 333333444444431 111235566777777777642 5543
Q ss_pred cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHH
Q 012124 383 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERI 457 (470)
Q Consensus 383 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~---~~iRls~~~--~~~~i~~~l~~l 457 (470)
.+.+ +.+.+.+.. ...++.++|+++ ||.+.+..+...+ ..+|++++. ++++|+++++.|
T Consensus 392 ---~sPI-~pI~ig~~~-----------~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L 455 (476)
T PLN02955 392 ---SSPI-ISLVVGNQE-----------KALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITAL 455 (476)
T ss_pred ---CCCE-EEEEeCCHH-----------HHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHH
Confidence 1223 334444321 456778888876 9999875543332 369999986 999999999999
Q ss_pred HHHHHh
Q 012124 458 KKGLLT 463 (470)
Q Consensus 458 ~~~l~~ 463 (470)
.++.+.
T Consensus 456 ~~~~~~ 461 (476)
T PLN02955 456 SSCLDF 461 (476)
T ss_pred HHHHhh
Confidence 988754
No 199
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.92 E-value=3.1e-22 Score=202.81 Aligned_cols=360 Identities=17% Similarity=0.116 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHhcCCC--eEEccCCCCCCCChHHHHHHHHHHH-HcCCCCC---CCCcCcHHHHHHHHHHHHHHcCCCCC
Q 012124 80 VAITDQATALAQAGVS--VIRLAAGEPDFDTPVLIAEAGINAI-REGFTRY---TPNAGTLELRSAICHKLKEENGLSYT 153 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~--~i~l~~g~~~~~~~~~~~~a~~~~~-~~~~~~y---~~~~g~~~lr~~ia~~l~~~~g~~~~ 153 (470)
.++.+....+.+++.. ...++.|.++...|+.+.+++.+.. -...+.| ...+|..+++..+++++.+.+|.+
T Consensus 52 ~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-- 129 (481)
T PRK04366 52 LEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD-- 129 (481)
T ss_pred HHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--
Confidence 3445555556555432 2447788888888888888887752 2245667 356799999999999999999963
Q ss_pred CCcEEEecChHHHHHHH--HH-HhcCCCC----eEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 154 PDQILVSNGAKQSILQA--VL-AVCSPGD----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~--~~-~l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
...+..++|+++.+..+ ++ .+.++|| +|++++|.|+.+...++..|++++.++++. ++.+|++.|++++++
T Consensus 130 ~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~--~~~~D~e~L~~~i~~ 207 (481)
T PRK04366 130 AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE--DGLVDLEALKAAVGE 207 (481)
T ss_pred ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC--CCCcCHHHHHhhccc
Confidence 44566667777666533 22 3456776 999999999999999999999999999853 456999999999998
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
++++|++++|+ |||.. ..++++|+++|+++ |+++|+|.++..-..+ . .+.. ..+-.++++|.+|.++.|
T Consensus 208 ~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~-gal~iVD~a~~~~~~g-~--~~~~----~~GaD~~~~~~hK~l~~P 276 (481)
T PRK04366 208 DTAALMLTNPN-TLGLF--ERNILEIAEIVHEA-GGLLYYDGANLNAILG-K--ARPG----DMGFDVVHLNLHKTFSTP 276 (481)
T ss_pred CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHc-CCEEEEEecChhhhcc-c--CCcc----ccCCCEEEEechhhcCCC
Confidence 99999999988 99964 34599999999999 9999999998532111 1 1111 235568999999998643
Q ss_pred ----cceeeEEEcCHHHHHHHHHH-------------------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 307 ----GWRLGYIAGPKHFVAACNKI-------------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 307 ----G~r~G~~~~~~~~~~~l~~~-------------------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
|..+|++.+.+++.+.+... ++.-.+..+.....++..++.. .+.+.++++.++.
T Consensus 277 ~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~--~G~~Gl~~~a~~~ 354 (481)
T PRK04366 277 HGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS--LGAEGLREVSEDA 354 (481)
T ss_pred CCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 44578888887776655200 0001111122333344444432 1245567777777
Q ss_pred HHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--CCCCcEEE
Q 012124 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRI 441 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f--~~~~~iRl 441 (470)
..+.+++.+.|.++.++.+..+...- +.++++.. . .. ..+..++.++|.++ ||.+. +..| ...+.+|+
T Consensus 355 ~~~a~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~-~--~~----g~~~~~v~~~L~~~-Gi~~~-~~~~p~~~~~~l~i 424 (481)
T PRK04366 355 VLNANYLKARLKDIYDLPYDRPCMHE-FVLSGKKL-K--ET----GVRTLDIAKRLLDY-GFHPP-TIYFPLIVPEALMI 424 (481)
T ss_pred HHHHHHHHHHhHhhCcccCCCCeeEE-EEEECccc-c--cc----CCCHHHHHHHHHHC-CccCC-ccccccccCCeEEE
Confidence 77888899888875233321111111 22333210 0 00 01678899988765 88754 2222 12568999
Q ss_pred Eeec--CHHHHHHHHHHHHHHHHhhCC
Q 012124 442 SYAA--SLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 442 s~~~--~~~~i~~~l~~l~~~l~~~~~ 466 (470)
+++. ++++|+.+++.|+++.++...
T Consensus 425 s~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 425 EPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9975 899999999999999887654
No 200
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=7.1e-23 Score=201.72 Aligned_cols=308 Identities=17% Similarity=0.160 Sum_probs=212.7
Q ss_pred CChHHHHHHHHHHHHcCCCC-C--CC--CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh----cCC
Q 012124 107 DTPVLIAEAGINAIREGFTR-Y--TP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV----CSP 177 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~~~~~-y--~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l----~~~ 177 (470)
+.|+.+.+++.+.+...... . .. .....++.+.+.+.+.+.+| +++++|++|+|+++++++++..+ .++
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~ 87 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG--ADPKEIIFTSGATESNNLAIKGVMHFYKDK 87 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCCHHHHHHHHHHHHHHhccCC
Confidence 35778888888876532110 0 00 01112334444444444456 46789999999999988877654 478
Q ss_pred CCeEEEcCCCCCChHHH---HHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 178 GDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 178 gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
||+|++.+..|+++... ++..|++++.++++. ++.+|++.++++++++++++++++++||||..++ +++|.+
T Consensus 88 g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~~I~~ 162 (364)
T PLN02651 88 KKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VEEIGE 162 (364)
T ss_pred CCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HHHHHH
Confidence 99999998888765443 345799999999863 3458999999999999999999999999999999 889999
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh-------
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------- 327 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~------- 327 (470)
+|+++ |+++++|.+++.. ..+..+.. .+-.+++.|..|.+| | ..+|++++.++....+....
T Consensus 163 ~~~~~-g~~~~vD~a~~~g----~~~~~~~~----~~~D~~~~s~hK~~g-p-~G~g~l~v~~~~~~~l~p~~~g~~~~~ 231 (364)
T PLN02651 163 LCREK-KVLFHTDAAQAVG----KIPVDVDD----LGVDLMSISGHKIYG-P-KGVGALYVRRRPRVRLEPLMSGGGQER 231 (364)
T ss_pred HHHHc-CCEEEEEcchhhC----CcccCccc----CCCCEEEechhhhCC-C-CceEEEEEcCCCCCCCCccccCCCccC
Confidence 99999 9999999999752 11222222 245688999999654 3 34899988776544332111
Q ss_pred hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc-CCCCeecCCC------ceEEEeeeccCccC
Q 012124 328 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQ------GAFYLFIDFSTYYG 400 (470)
Q Consensus 328 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~------~g~~~~~~~~~~~~ 400 (470)
.....+++.....++.++|+. ..+..++++++.++.++++.+.|.+ ++|+++..|. .++ +.+.+++.
T Consensus 232 ~~~~GT~~~~~~~~l~~al~~---~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i-~~~~~~~~-- 305 (364)
T PLN02651 232 GRRSGTENTPLVVGLGAACEL---AMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGT-LNLSFAYV-- 305 (364)
T ss_pred CccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCE-EEEEeCCC--
Confidence 112334566666666666664 2334577778888889999999875 6788877641 223 44456543
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHHH
Q 012124 401 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTLQ 451 (470)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-------------------~~~iRls~~~--~~~~i~ 451 (470)
+..++.+.|. + |.+..|..+.. .+.+|+|++. +++||+
T Consensus 306 ----------~~~~~~~~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 306 ----------EGESLLMGLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ----------CHHHHHHHhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 6778888774 3 99988875422 2689999997 777764
No 201
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.92 E-value=2.3e-22 Score=197.84 Aligned_cols=217 Identities=16% Similarity=0.202 Sum_probs=167.9
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 204 (470)
..+-..+|++.++++. | .+..++++++++|+..++.+++++||+|+++.++|.+.... ++..|+++..
T Consensus 38 ~~p~~~~le~~la~l~----g----~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 38 GNPTVDALEKKLAALE----G----GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred CChhHHHHHHHHHHHH----C----CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 3444567777777764 3 24677888889999999999999999999999999887643 4467888888
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++.+ |++.+++++++++++|++.+|+||+|.+.+ +++|+++|+++ |+++|+|++|+...+. .+
T Consensus 110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~-g~~livD~t~~~~~~~----~~-- 172 (369)
T cd00614 110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEH-GALLVVDNTFATPYLQ----RP-- 172 (369)
T ss_pred eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcchhcC----Ch--
Confidence 8752 689999999889999999999999999999 88999999999 9999999999764321 11
Q ss_pred ccCCCCCceEEEeccCccccccc-ceeeEEEcCH-HHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~~G-~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
+. .+..+++.|++|.++.+| .+.||+++++ ++++.+.........+.+++.+.++...++. +....++
T Consensus 173 -~~--~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-------l~~r~~~ 242 (369)
T cd00614 173 -LE--LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT-------LPLRMER 242 (369)
T ss_pred -hh--hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-------HHHHHHH
Confidence 11 245689999999997455 7899999977 8888888777666667777766555444432 3334556
Q ss_pred HHHHHHHHHHHhccCCCC
Q 012124 363 FRERRDFLVKSFGELEGV 380 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~ 380 (470)
..++.+.+.+.|++.|++
T Consensus 243 ~~~na~~la~~L~~~~~v 260 (369)
T cd00614 243 HSENALKVAEFLEKHPKV 260 (369)
T ss_pred HHHHHHHHHHHHHcCCCc
Confidence 677888888888887655
No 202
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92 E-value=1.7e-22 Score=190.83 Aligned_cols=324 Identities=21% Similarity=0.212 Sum_probs=235.4
Q ss_pred ChHHHHHHHHHHHHcC------CCCCCC--CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH--hc--
Q 012124 108 TPVLIAEAGINAIREG------FTRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA--VC-- 175 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~------~~~y~~--~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~--l~-- 175 (470)
+.+.+++++...+... .+.|+- .....+-|+.||+.+ | +++++|++|+|++++.++++.. ..
T Consensus 13 ~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll----g--a~~~eIiFTSG~TEsnNlaI~g~~~a~~ 86 (386)
T COG1104 13 VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL----G--ADPEEIIFTSGATESNNLAIKGAALAYR 86 (386)
T ss_pred CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEecCCcHHHHHHHHhhHHhhh
Confidence 3577888888877653 122210 122345666666665 4 5779999999999999999987 22
Q ss_pred --CCCCeEEEcCCCCCChHHHHHHc---CCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHH
Q 012124 176 --SPGDEVIIPAPFWVSYPEMARIA---DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 250 (470)
Q Consensus 176 --~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~ 250 (470)
+.|..|++..-.++...+.++.+ |.++.++|++.++ .+|++.|++++++++.+|.+...||.||++.| ++
T Consensus 87 ~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G--~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---I~ 161 (386)
T COG1104 87 NAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNG--LVDLEQLEEALRPDTILVSIMHANNETGTIQP---IA 161 (386)
T ss_pred cccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCC--eEcHHHHHHhcCCCceEEEEEecccCeeeccc---HH
Confidence 25789999988888887766554 9999999998644 59999999999999999999999999999999 99
Q ss_pred HHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHH--HH---H
Q 012124 251 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--CN---K 325 (470)
Q Consensus 251 ~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~--l~---~ 325 (470)
+|.++|+++ ++++++|.++.. |+-+..+..+ .-.+...|-+|..|..| +|+++..+.+.-. +. .
T Consensus 162 ei~~i~k~~-~i~fHvDAvQa~----Gkipi~~~~~----~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQ 230 (386)
T COG1104 162 EIGEICKER-GILFHVDAVQAV----GKIPIDLEEL----GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQ 230 (386)
T ss_pred HHHHHHHHc-CCeEEEehhhhc----Cceecccccc----CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcC
Confidence 999999999 999999999875 3333333332 23355667789999677 7888764432211 11 1
Q ss_pred HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-CCCeecCCC---ceEEEeeeccCccCC
Q 012124 326 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-EGVKMSEPQ---GAFYLFIDFSTYYGS 401 (470)
Q Consensus 326 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~---~g~~~~~~~~~~~~~ 401 (470)
-+..-....+.+...+...+++. ..+.++....++...|+.+.+.|.+. |++.+.... -...+.+.+|..
T Consensus 231 E~g~RsGTenv~~Ivg~~~A~~~---a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv--- 304 (386)
T COG1104 231 ERGLRSGTENVPGIVGFGKAAEI---AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV--- 304 (386)
T ss_pred CCCCCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC---
Confidence 11122233455555666666664 35667778888899999999999875 777665432 234466677764
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC-------------------CcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD-------------------TCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 402 ~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~-------------------~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
..+.+...| +..||.+..|+.+... +.||+||+. +++|++.+++.|.++
T Consensus 305 ---------~gE~ll~~L-~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~ 374 (386)
T COG1104 305 ---------EGESLLLAL-DLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI 374 (386)
T ss_pred ---------cHHHHHHhc-cccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 566666654 5669999999987531 479999997 899999999999999
Q ss_pred HHhhCCCCC
Q 012124 461 LLTLRPGVP 469 (470)
Q Consensus 461 l~~~~~~~~ 469 (470)
++++++..|
T Consensus 375 i~~lr~~~~ 383 (386)
T COG1104 375 IKRLRELSP 383 (386)
T ss_pred HHHHhhhcc
Confidence 999876544
No 203
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.92 E-value=5.5e-22 Score=196.63 Aligned_cols=216 Identities=16% Similarity=0.176 Sum_probs=160.7
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEe
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 205 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v 205 (470)
.+...+|++.++++. |. +..++++++++++.+++.++++|||+|+++.|.|..... .++..|++++.+
T Consensus 64 ~p~~~~le~~lA~l~----g~----~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v 135 (403)
T PRK07503 64 NPTLALLEQRMASLE----GG----EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV 135 (403)
T ss_pred CchHHHHHHHHHHHh----CC----CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEe
Confidence 345678888888875 32 345667777889999999999999999999999976443 455689999888
Q ss_pred cCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 206 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 206 ~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
+++ |++.+++++++++++|++++|+||||.+.+ +++|+++|+++ |++||+|++|...... .++ .
T Consensus 136 d~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~-gi~lIvD~a~a~~~~~----~~l-~ 199 (403)
T PRK07503 136 DLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGA-GAKVVVDNTYCTPYLQ----RPL-E 199 (403)
T ss_pred CCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-h
Confidence 762 789999999889999999999999999998 88899999999 9999999999864321 122 1
Q ss_pred cCCCCCceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHH--hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 286 LPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
.+..+++.|+||.++.+| .+.||++.+++++++++.. +...+.+.+++.+..+...|+ .+....++
T Consensus 200 ----~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-------tl~~r~~~ 268 (403)
T PRK07503 200 ----LGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-------TLALRMDR 268 (403)
T ss_pred ----hCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-------hHHHHHHH
Confidence 233499999999998555 7889999999988888633 444456667776655444333 23333333
Q ss_pred HHHHHHHHHHHhccCCCC
Q 012124 363 FRERRDFLVKSFGELEGV 380 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~ 380 (470)
..++...+.+.|++.|.+
T Consensus 269 ~~~na~~~a~~L~~~p~v 286 (403)
T PRK07503 269 HCASAQAVAEWLARHPAV 286 (403)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 445666677777766554
No 204
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.91 E-value=4.9e-22 Score=196.67 Aligned_cols=217 Identities=15% Similarity=0.222 Sum_probs=158.8
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~ 204 (470)
+.+-..+|++.+++++ |. +..+++++++.++..++.+++++||+|++++|.|.++...+ ...|++++.
T Consensus 63 ~~p~~~~Le~~lA~l~----G~----~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 134 (398)
T PRK07504 63 SNPTVDMFEKRMCALE----GA----EDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTL 134 (398)
T ss_pred CCchHHHHHHHHHHHh----CC----CeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEE
Confidence 3345678888888875 32 23345777788888888888899999999999999865543 457888888
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++. +|++.+++++++++|+|++++|+||||.+++ +++|.++|+++ |+++|+|++|....+. .++
T Consensus 135 vd~-------~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~-gi~lvvD~a~a~~~~~----~~~- 198 (398)
T PRK07504 135 VDG-------LDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQA-GAKLVVDNVFATPLFQ----KPL- 198 (398)
T ss_pred ECC-------CCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHc-CCEEEEECCccccccC----Cch-
Confidence 751 6999999999999999999999999999999 88889999999 9999999999864332 111
Q ss_pred ccCCCCCceEEEeccCcccccccceee-EEEcCHHHHH-HHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~~G~r~G-~~~~~~~~~~-~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
. .+..+++.|++|.++.+|.++| +++++++++. .+...........+++.+..+...|+ .+..+.++
T Consensus 199 ~----~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~-------tl~~R~~~ 267 (398)
T PRK07504 199 E----LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLE-------TLPVRVRQ 267 (398)
T ss_pred h----hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc-------hHHHHHHH
Confidence 1 2456899999999987899985 6667777665 34444444444556555444444333 23444444
Q ss_pred HHHHHHHHHHHhccCCCC
Q 012124 363 FRERRDFLVKSFGELEGV 380 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~ 380 (470)
..++...+.+.|++.|++
T Consensus 268 ~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 268 QTESAAAIADFLAGHPKV 285 (398)
T ss_pred HHHHHHHHHHHHHcCCCc
Confidence 456777777778776654
No 205
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=7.2e-22 Score=193.68 Aligned_cols=217 Identities=14% Similarity=0.155 Sum_probs=164.3
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~ 204 (470)
+.+....|+++++++. ..+++++++|+++++.+++.+++++||+|++++|+|.+....+ ...|.+++.
T Consensus 51 ~npt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~ 122 (388)
T PRK08861 51 GNPNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQF 122 (388)
T ss_pred CCchHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEE
Confidence 3445678888888885 2479999999999999999999999999999999998654433 335778777
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ ++++|+|++|....+. .++
T Consensus 123 vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~-gi~vIvDea~~~~~~~----~pl- 186 (388)
T PRK08861 123 VDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAV-GALVAVDNTFLTPVLQ----KPL- 186 (388)
T ss_pred ECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCccccccC----CCc-
Confidence 753 4889999999889999999999999999999 77889999999 9999999999864322 111
Q ss_pred ccCCCCCceEEEeccCccccc-ccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFAM-TGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
. .+-.+++.|++|.++- .+...|++++ ++++.+.+...+.....+.+++....+..-|+. +.-+.++
T Consensus 187 ~----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-------l~lR~~~ 255 (388)
T PRK08861 187 E----LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-------LGARMRV 255 (388)
T ss_pred c----cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-------HHHHHHH
Confidence 1 2344899999999853 3467899887 456777787777777777788775544443332 3334444
Q ss_pred HHHHHHHHHHHhccCCCC
Q 012124 363 FRERRDFLVKSFGELEGV 380 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~ 380 (470)
..++...+.+.|++.|.+
T Consensus 256 ~~~~a~~~a~~L~~~p~v 273 (388)
T PRK08861 256 HEESAQQILAYLQTQSLV 273 (388)
T ss_pred HHHHHHHHHHHHHhCCCe
Confidence 556666777777776554
No 206
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=7.9e-22 Score=196.81 Aligned_cols=349 Identities=13% Similarity=0.101 Sum_probs=227.1
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+.. ......+....+++.+....+. ...+.+++++++++|.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e 115 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTA-YQIVPYASYVTLAERINALAPI-DGPAKTAFFTTGAEAVE 115 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccc-ccccCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHHH
Confidence 67788999888532 333 7889999999987632111 1111234455666666543321 12368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCCE-------------EEEecCcCCC-C--CccCHHhHhhhcc----
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADAT-------------PVILPTRISE-N--FLLDPKVLESKLT---- 225 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~~~-~--~~~d~~~l~~~l~---- 225 (470)
.+++... ....+|+...-+|++....+.. .|.. +..++..... + ..-+++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 9888642 2235788888899988754432 2210 1111211100 0 0113566777663
Q ss_pred -CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccc
Q 012124 226 -EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 303 (470)
Q Consensus 226 -~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~ 303 (470)
+++.+|++...++..|. +++.+.+++|.++|++| |+++|.||+|..+.+.+. ......++-..+ +.+|||.+
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~g~-~~~~~~~~~~pD----iv~~sK~l 269 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH-GILLIADEVQTGFARTGK-LFAMEYYDVKPD----LITMAKSL 269 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCccCCc-hhhhhhcCCCCC----EEeeehhh
Confidence 34566777656888885 68999999999999999 999999999998765543 222222221112 33799999
Q ss_pred ccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 012124 304 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG 379 (470)
Q Consensus 304 ~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g 379 (470)
+ +|+|+||+++++++++.+.......+++.+++.+.++.+.|+.- ++ +.+.++++++.+++.+.|+++ +.
T Consensus 270 ~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 343 (421)
T PRK06777 270 G-GGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVI---AE--EKLCQRALILGAHLVEVLEKAKASCPA 343 (421)
T ss_pred c-CCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8 99999999999999988775555677889999999999999741 21 345666666777777776653 43
Q ss_pred CeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHH
Q 012124 380 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERI 457 (470)
Q Consensus 380 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l 457 (470)
+....+.+.|+. +.+..... +.....-...+.+.+++ .||.+.|+..|+ +++||++. .+++++++++++|
T Consensus 344 i~~vrg~G~~~~-i~~~~~~~----~~~~~~~~~~l~~~~~~-~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~~~~~~l 415 (421)
T PRK06777 344 IVDIRARGSMVA-VEFNDPQT----GKPSPEFTRQYQRQALE-EGLLLLSCGVHG--NVIRFLYPLTIPDAQFSKALNIL 415 (421)
T ss_pred eEEecCceEEEE-EEEecCcc----CCccHHHHHHHHHHHHh-CCeEEeecCCCC--CEEEEeCCCCCCHHHHHHHHHHH
Confidence 444566776654 33321100 00000012334444555 599999987664 69999986 4999999999999
Q ss_pred HHHHH
Q 012124 458 KKGLL 462 (470)
Q Consensus 458 ~~~l~ 462 (470)
++++.
T Consensus 416 ~~~l~ 420 (421)
T PRK06777 416 TRLLA 420 (421)
T ss_pred HHHHh
Confidence 98874
No 207
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.91 E-value=1.2e-21 Score=194.22 Aligned_cols=340 Identities=14% Similarity=0.130 Sum_probs=227.0
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+..+.+ .. -..+....+++.|....+ ..+.+++++++++|.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e 112 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTS-NV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTEANE 112 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc-cc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHH
Confidence 6778999998853 3333 7889999999987532222 21 223455667777765332 1268999999999999
Q ss_pred HHHHHhcC--------CC-CeEEEcCCCCCChHHHHHH-cCCEEEE---ecCcCC---CCCccCHHhHhhhccCCceEEE
Q 012124 169 QAVLAVCS--------PG-DEVIIPAPFWVSYPEMARI-ADATPVI---LPTRIS---ENFLLDPKVLESKLTEKSRLLI 232 (470)
Q Consensus 169 ~~~~~l~~--------~g-d~Vlv~~p~y~~~~~~~~~-~g~~~~~---v~~~~~---~~~~~d~~~l~~~l~~~~~~i~ 232 (470)
.+++.... ++ .+|+....+|++....... .|..... -|.... -.+ .|++.+++.+.++..+.+
T Consensus 113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~~aav 191 (408)
T PRK04612 113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGDVAAV 191 (408)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCCEEEE
Confidence 99886431 22 4688889999987654332 2211110 011000 011 378899988865566677
Q ss_pred EcCCCCCcccCCC--HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccccee
Q 012124 233 LCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 310 (470)
Q Consensus 233 l~~p~nPtG~~~s--~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~ 310 (470)
+..|.+++|.+++ .+.+++|.++|++| |+++|+||+|..+...+. .+. ... .+.+..+.||||.++ +|+|+
T Consensus 192 i~eP~~~~gg~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~---~~a-~~~-~~~~pdi~t~~K~l~-~G~pi 264 (408)
T PRK04612 192 MLEPIQGEGGVMPAAPGFLARVRALCDQH-DALLVLDEIQCGMGRTGT---LFA-HWQ-EQVTPDIVTLAKALG-GGFPI 264 (408)
T ss_pred EECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCc---hhh-hhh-cCCCCCEEEEcchhc-CCCce
Confidence 7777777776555 67999999999999 999999999998655442 121 111 355677899999998 99999
Q ss_pred eEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC---CC-eecCCC
Q 012124 311 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GV-KMSEPQ 386 (470)
Q Consensus 311 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~-~~~~~~ 386 (470)
||+++++++++.+.......+++.+++.+.++.+.|+.- ++ .++.+..+++.+++.+.|+++. ++ .... .
T Consensus 265 ga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~---~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vr-g 338 (408)
T PRK04612 265 GAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKL---AS--PQIAANVARQSAALRAGLEALNAEFGVFAQVR-G 338 (408)
T ss_pred EEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeee-c
Confidence 999999998888766555567788999999999988752 11 2344455555555555555431 22 2222 3
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
-|+++.+.+..... .....+++.+.++ ||.+.|.. .+.+|+.... +++++++++++|+++++++
T Consensus 339 ~Gl~~~i~~~~~~~---------~~a~~i~~~l~~~-Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 339 RGLMLGAVLAPAHA---------GQAGAILDLAAEH-GLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred cceEEEEEecCchh---------hHHHHHHHHHHHC-CeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 35556666642100 0355677776654 99987632 3789998665 9999999999999998765
No 208
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.2e-21 Score=193.45 Aligned_cols=217 Identities=13% Similarity=0.110 Sum_probs=159.9
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~ 204 (470)
+.....+|++.++++.+. +..++++++++++.+++.+++++||+|++++|+|.+....+. ..|+++..
T Consensus 59 ~~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 59 GNPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CCccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 456788999999998631 233445566899999999999999999999999997654433 35787777
Q ss_pred ecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 284 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~ 284 (470)
++. .|++.+++++++++++|++++|+||||...+ +++|+++|+++ |++||+|++|+..... .++.
T Consensus 131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~-gi~lIvD~a~a~~~~~----~p~~ 195 (388)
T PRK07811 131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDA-GAKVVVDNTFASPYLQ----QPLA 195 (388)
T ss_pred eCC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHc-CCEEEEECCCCccccC----Cchh
Confidence 764 4899999999989999999999999999877 88999999999 9999999999864321 1221
Q ss_pred ccCCCCCceEEEeccCccccccc-ceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 285 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 285 ~~~~~~~~~i~i~S~sK~~~~~G-~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
.+..+++.|++|.++.+| .+.||+++ ++++.+.+...+.......+++....+...|+. +..+.++
T Consensus 196 -----~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t-------l~~R~~~ 263 (388)
T PRK07811 196 -----LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT-------LAVRMDR 263 (388)
T ss_pred -----hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-------HHHHHHH
Confidence 133499999999997444 56799887 467777777666555555666654333333332 3344455
Q ss_pred HHHHHHHHHHHhccCCCC
Q 012124 363 FRERRDFLVKSFGELEGV 380 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~ 380 (470)
..++...+.+.|++.|++
T Consensus 264 ~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 264 HSENAEAVAEFLAGHPEV 281 (388)
T ss_pred HHHHHHHHHHHHHhCCCe
Confidence 566777778888777665
No 209
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=1.7e-21 Score=192.20 Aligned_cols=312 Identities=16% Similarity=0.203 Sum_probs=208.2
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 187 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~ 187 (470)
.+.-.+++.+.+..+...+ .....+|++.+++++. .++++.++|+++|+.+++.++ +++||+|++++|+
T Consensus 13 ~~~e~~~~~~~l~~~~~~~--g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~ 82 (379)
T PRK11658 13 GDEELAAVKEVLRSGWITT--GPKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLT 82 (379)
T ss_pred CHHHHHHHHHHHHcCCccC--CHhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 3555778888887655444 3357899999999873 246888999999999999998 7999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEe
Q 012124 188 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267 (470)
Q Consensus 188 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~D 267 (470)
|+.+...+...|++++.++++.+ ++.+|++.+++++++++++|+ |.||+|...+ +++|.++|+++ |++||+|
T Consensus 83 ~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~-gi~vi~D 154 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERY-GIPVIED 154 (379)
T ss_pred HHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHc-CCeEEEE
Confidence 99999999999999999999753 466899999999998999887 6678999888 78899999999 9999999
Q ss_pred ccccc-cccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC-HHHHHHHHHHhhhcc--------------
Q 012124 268 EIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT-------------- 331 (470)
Q Consensus 268 d~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~-------------- 331 (470)
++++. ..+.+. .+. . .+. .+.||++.-.+++.+.|+++.+ +++.++++..+....
T Consensus 155 ~a~a~g~~~~~~---~~g---~-~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 225 (379)
T PRK11658 155 AAHAVGTYYKGR---HIG---A-RGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAP 225 (379)
T ss_pred CCCccCCeECCe---ecC---C-CCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCC
Confidence 99984 223221 111 1 122 3556664444466678988864 788887776442210
Q ss_pred --------CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC----ceEEE-eeeccCc
Q 012124 332 --------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYL-FIDFSTY 398 (470)
Q Consensus 332 --------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~~-~~~~~~~ 398 (470)
++.......|+..... .+.+++..++.++..+.+.+.|+++++..+..+. ..+++ .+.++..
T Consensus 226 ~~~~~~~G~n~~~~~l~AAl~~~q-----l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T PRK11658 226 QAEVLTPGYKYNLADINAAIALVQ-----LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEE 300 (379)
T ss_pred cceeeccccccCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCc
Confidence 0011111223333332 2345666666667777777888877533332221 12222 2344321
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC----C---CC-------C-------CCcEEEEeec--CHHHHHHHHH
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGD----A---FG-------D-------DTCIRISYAA--SLTTLQAAVE 455 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~----~---f~-------~-------~~~iRls~~~--~~~~i~~~l~ 455 (470)
. ...+.+++.+.|.++ ||.+.+.. . |. . ...+.|.+.. ++++++..++
T Consensus 301 ~--------~~~~r~~~~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~ 371 (379)
T PRK11658 301 R--------CGISRDALMEALKER-GIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVIT 371 (379)
T ss_pred c--------ccCCHHHHHHHHHHC-CCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHH
Confidence 0 001567888888755 88654321 0 00 0 1235554444 8899999999
Q ss_pred HHHHHH
Q 012124 456 RIKKGL 461 (470)
Q Consensus 456 ~l~~~l 461 (470)
.|++++
T Consensus 372 ~i~~~~ 377 (379)
T PRK11658 372 ALQQIA 377 (379)
T ss_pred HHHHHH
Confidence 998875
No 210
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.91 E-value=1.2e-21 Score=193.34 Aligned_cols=215 Identities=13% Similarity=0.158 Sum_probs=159.7
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEec
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILP 206 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 206 (470)
+-..+|++.++++.. .+..+++++++.++.+++.+++++||+|+++.|.|..... .+...|++++.++
T Consensus 59 p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd 130 (391)
T TIGR01328 59 PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFIN 130 (391)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEEC
Confidence 345678888888863 2346778888899999999999999999999998876543 3456899998887
Q ss_pred CcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc
Q 012124 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 286 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~ 286 (470)
++ |++.+++++++++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|...... .++
T Consensus 131 ~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~-gi~livD~a~a~~~~~----~~~--- 192 (391)
T TIGR01328 131 MA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQ-GVKVIVDNTFATPMLT----NPV--- 192 (391)
T ss_pred CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCchhccC----Cch---
Confidence 63 789999999889999999999999999999 78889999999 9999999999853321 111
Q ss_pred CCCCCceEEEeccCcccccccce-eeEEEcCHHHHHHHHHHhh--hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 287 PGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 287 ~~~~~~~i~i~S~sK~~~~~G~r-~G~~~~~~~~~~~l~~~~~--~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
. .+..+++.|+||.++.+|.+ .|++++++++++.++.... ......+++....+...|+ .+..+.++.
T Consensus 193 ~--~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~-------tl~~r~~~~ 263 (391)
T TIGR01328 193 A--LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK-------TLNIRMKRH 263 (391)
T ss_pred h--cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC-------cHHHHHHHH
Confidence 1 23448899999999878876 5788889998888875432 2233445554444433332 233345556
Q ss_pred HHHHHHHHHHhccCCCC
Q 012124 364 RERRDFLVKSFGELEGV 380 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~ 380 (470)
+++.+.+.+.|++.|++
T Consensus 264 ~~na~~la~~L~~~p~v 280 (391)
T TIGR01328 264 SENAMKVAEYLKSHPAV 280 (391)
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 67777778888776655
No 211
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.91 E-value=1e-21 Score=192.56 Aligned_cols=216 Identities=20% Similarity=0.183 Sum_probs=160.6
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCC
Q 012124 125 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 200 (470)
Q Consensus 125 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~ 200 (470)
..| +.+...+|+++++++. . ++.++++++++++..++.+++++||+|++.+|+|.++...+ ...|+
T Consensus 46 ~ry-~~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 46 GRA-SNPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred ECC-CCccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 445 6677899999999885 2 34555666668999999999999999999999998887654 45799
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 280 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~ 280 (470)
+++.++.+.+ .+ .+.+++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|... + +.
T Consensus 116 ~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~-g~~lvVD~t~~~~-~-~~-- 177 (366)
T PRK07582 116 TVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAA-GALLVVDNTTATP-L-GQ-- 177 (366)
T ss_pred EEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCCCCc-c-cc--
Confidence 9999987421 11 22357899999999999998887 89999999999 9999999998631 1 11
Q ss_pred ccccccCCCCCceEEEeccCccc-ccccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHH
Q 012124 281 TSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 358 (470)
Q Consensus 281 ~~~~~~~~~~~~~i~i~S~sK~~-~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 358 (470)
.++ .+ +..++++|++|.+ |.+|+|+||+++ ++++++.+...+.....+++++.+..+...++. +..
T Consensus 178 ~p~-~~----g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t-------l~~ 245 (366)
T PRK07582 178 RPL-EL----GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT-------LGL 245 (366)
T ss_pred Cch-hc----CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-------HHH
Confidence 122 12 2348899999998 446799999997 578888888877777777788776655555543 333
Q ss_pred HHHHHHHHHHHHHHHhccCCCC
Q 012124 359 MVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 359 ~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
..++..++...+.+.|++.|.+
T Consensus 246 R~~~~~~na~~la~~L~~~p~v 267 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAV 267 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 3355567777788888877665
No 212
>PLN02624 ornithine-delta-aminotransferase
Probab=99.91 E-value=1.1e-21 Score=198.33 Aligned_cols=336 Identities=15% Similarity=0.118 Sum_probs=215.5
Q ss_pred cCCCeEEccCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++||.+|...... ++.+.+++.+++.+..... ..-..+....+++.+.+..+ .+.++++++++++.+
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~--~~~~~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e 146 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSS--RAFYNDKFPEFAEYLTSMFG----YDMVLPMNTGAEGVE 146 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcc--cccCCHHHHHHHHHHHhhcC----CCeEEEeCChHHHHH
Confidence 57788999888654433 7999999999987632111 11122333445555544333 368999999999999
Q ss_pred HHHHHhcC--------C-CC-eEEEcCCCCCChHHHHHHcCCE-------------EEEecCcCCCCCccCHHhHhhhcc
Q 012124 169 QAVLAVCS--------P-GD-EVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 169 ~~~~~l~~--------~-gd-~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+++.... + ++ .|+...-+|++..........+ +..++. .|++.+++.++
T Consensus 147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 219 (474)
T PLN02624 147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEKIFE 219 (474)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 99875432 1 32 5777788888875443332211 112221 26788888885
Q ss_pred ---CCceEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc
Q 012124 226 ---EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 226 ---~~~~~i~l~~p~nPtG~~~s~~-~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK 301 (470)
+++++|++..++|++|.+++.+ .+++|.++|++| |+++|.||+|..+...+... .. ...+... -+.+|||
T Consensus 220 ~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~-gillI~DEv~tG~GrtG~~~-a~-~~~~i~p---Div~lsK 293 (474)
T PLN02624 220 EDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH-NVLMIADEIQTGLARTGKML-AC-DWEEVRP---DVVILGK 293 (474)
T ss_pred hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCcCcCcchh-hH-HhcCCCC---CEEEecc
Confidence 4577888888999999988766 599999999999 99999999998764444211 11 1111111 2444789
Q ss_pred ccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----C
Q 012124 302 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----L 377 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 377 (470)
.++.+++++|++++++++++.+.......+++.+++.+.++.+.|+.- ++ ..+.+...++.+.+.+.|++ +
T Consensus 294 ~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l---~~--~~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 294 ALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVV---QD--EKLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred cccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHH---Hh--chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998555999999999988887765555556678999999998888641 11 11222223333333333322 2
Q ss_pred CC-CeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHH
Q 012124 378 EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAV 454 (470)
Q Consensus 378 ~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l 454 (470)
+. +....+.+.+ +.+.+..... ......++++.|.+ .||.+.|+. ++++||++. .++++|++++
T Consensus 369 ~~~i~~vrg~G~~-~~i~l~~~~~-------~~~~a~~~~~~L~e-~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l 435 (474)
T PLN02624 369 PKLIKEVRGRGLL-NAVVLNSPKL-------GPVSAYDVCLKLKE-RGLLAKPTH----DTIIRLAPPLSISEDELQECS 435 (474)
T ss_pred CCceEEEEeeEEE-EEEEecCCCc-------ChHHHHHHHHHHHh-CCeEEecCC----CCEEEEECCccCCHHHHHHHH
Confidence 22 3323344444 4444532100 00135678888765 499998863 578999864 4999999999
Q ss_pred HHHHHHHHhh
Q 012124 455 ERIKKGLLTL 464 (470)
Q Consensus 455 ~~l~~~l~~~ 464 (470)
++|++++++.
T Consensus 436 ~~L~~~l~~~ 445 (474)
T PLN02624 436 KALSDVLEHD 445 (474)
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 213
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=4e-21 Score=188.21 Aligned_cols=241 Identities=13% Similarity=0.136 Sum_probs=176.7
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCCC--cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 012124 104 PDFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 181 (470)
Q Consensus 104 ~~~~~~~~~~~a~~~~~~~~~~~y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~V 181 (470)
++++.++.+.++..... .....|+.. +...+|++.|+++. ..+++++++|+++|+..++.+++++||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~-~~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~V 103 (394)
T PRK09028 33 VVFDTVAEMRHAAKNRA-NGEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHL 103 (394)
T ss_pred cccCCHHHHHHHhccCc-cCCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 44555555555443321 122456552 34568999999874 22478999999999999999999999999
Q ss_pred EEcCCCCCChHHHH----HHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 012124 182 IIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA 257 (470)
Q Consensus 182 lv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~ 257 (470)
++.+|.|.++...+ ...|+++..++.. +.+.+++++++++|+|++++|+||||.+.+ +++|+++|+
T Consensus 104 vv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~ 173 (394)
T PRK09028 104 LMVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAH 173 (394)
T ss_pred EEECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHH
Confidence 99999998877543 4578888776531 557899999989999999999999988766 899999999
Q ss_pred hCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccc-ccccceeeEEEcCHHHHHHHHHHhhhccCCCCh
Q 012124 258 KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASS 336 (470)
Q Consensus 258 ~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~ 336 (470)
++ |+++|+|++|+.... ..+ + ..+-.+++.|.+|.+ |-.++-.|+++.++++.+.+.........+.++
T Consensus 174 ~~-g~~lvvD~t~a~p~~----~~P---l--~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p 243 (394)
T PRK09028 174 EH-DIVVMLDNTWASPIN----SRP---F--EMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSP 243 (394)
T ss_pred Hc-CCEEEEECCcccccc----CCc---c--ccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCH
Confidence 99 999999999975211 111 1 145679999999999 434567798888888877777666666667777
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 337 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 337 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
+....+..-|+ .+.-+.++..++...+.+.|++.|.+
T Consensus 244 ~~a~l~~rgl~-------TL~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 244 DDVYLAMRGLR-------TLGVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHcccC-------cHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 76554443333 34555566677777888888877654
No 214
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.91 E-value=8e-22 Score=176.13 Aligned_cols=370 Identities=14% Similarity=0.168 Sum_probs=259.3
Q ss_pred ccCCchHHHHHHHHHHHHh-cCCCeEEccCCCCCCCC-----hHHHHHHHHHHHHc--CCCCCCCCcCcHHHHHHHHHHH
Q 012124 73 AVKPSKTVAITDQATALAQ-AGVSVIRLAAGEPDFDT-----PVLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKL 144 (470)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~-----~~~~~~a~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l 144 (470)
.++..++.++........+ ..+..++|+.|.--... -|.++++-.+...+ -.+.|-|..|.+.++++.++.+
T Consensus 8 ~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~ 87 (410)
T KOG1412|consen 8 NIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELL 87 (410)
T ss_pred CCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHh
Confidence 3344444444444333332 33456788888621111 23343333332222 2577999999999999999988
Q ss_pred HHHcCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcC-CEEEEecCcCCCCCccCHHh
Q 012124 145 KEENGLSYTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIAD-ATPVILPTRISENFLLDPKV 219 (470)
Q Consensus 145 ~~~~g~~~~~~~i--~it~g~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~ 219 (470)
-......+..+++ +-+-+++.|+.+....|. -+..+|.+..|+|.++..+++.+| ..+..++.-..+...+|++.
T Consensus 88 lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~ 167 (410)
T KOG1412|consen 88 LGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEG 167 (410)
T ss_pred cCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHH
Confidence 5333333445554 334566677776555442 245689999999999999999999 45666666555566789999
Q ss_pred HhhhccCCc-e-EEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc--ccccccCCCCCceE
Q 012124 220 LESKLTEKS-R-LLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFASLPGMWERTL 294 (470)
Q Consensus 220 l~~~l~~~~-~-~i~l~~p-~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~--~~~~~~~~~~~~~i 294 (470)
+...++..+ . .++++.+ |||||+..+.|+|++|++..++. +.+.+.|-+|++|.-+.... ..+..+.......+
T Consensus 168 ~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~f 246 (410)
T KOG1412|consen 168 FLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELF 246 (410)
T ss_pred HHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhc-CceeeeehhhcccccCCccccHHHHHHHHhcCCeEE
Confidence 988886533 3 3445555 99999999999999999999998 99999999999987654322 22233333345689
Q ss_pred EEeccCcccccccceeeEEEc---CHH----HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHH---HHHHHHHHH
Q 012124 295 TVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKAFR 364 (470)
Q Consensus 295 ~i~S~sK~~~~~G~r~G~~~~---~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~---~~~~~~~~~ 364 (470)
++.||+|.+|+.+-|+|-+.. .+. +...+..+.+...++++..+..++...|+...+.++| ++.+..+.+
T Consensus 247 v~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~ 326 (410)
T KOG1412|consen 247 VCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIK 326 (410)
T ss_pred EEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997542 333 4455566666677789999999999999986654555 456667888
Q ss_pred HHHHHHHHHhccC--CC-CeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012124 365 ERRDFLVKSFGEL--EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 441 (470)
Q Consensus 365 ~~~~~l~~~L~~~--~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRl 441 (470)
+.|..|++.|..+ || |.-+..+.|||-+--+ . ...++.|.+++.|++.+-. |+
T Consensus 327 ~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGL---------------t-p~qV~~li~~h~vyLl~~G--------RI 382 (410)
T KOG1412|consen 327 KMRTALRDHLVALKTPGTWDHITQQIGMFSYTGL---------------T-PAQVDHLIENHKVYLLSDG--------RI 382 (410)
T ss_pred HHHHHHHHHHHhcCCCCcHHHHHhhccceeecCC---------------C-HHHHHHHHHhceEEEecCC--------cE
Confidence 8899999998876 55 6666678899877544 2 2445678888899888744 89
Q ss_pred Eeec-CHHHHHHHHHHHHHHHHhhCCC
Q 012124 442 SYAA-SLTTLQAAVERIKKGLLTLRPG 467 (470)
Q Consensus 442 s~~~-~~~~i~~~l~~l~~~l~~~~~~ 467 (470)
+++. +...+|-..++|.+.++.++..
T Consensus 383 nisGLN~~NveyVAkAIde~Vr~~~~~ 409 (410)
T KOG1412|consen 383 NISGLNMKNVEYVAKAIDETVRAIKSN 409 (410)
T ss_pred eeeccccccHHHHHHHHHHHHHhhccC
Confidence 9998 7778888888888888776643
No 215
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=5.2e-21 Score=191.49 Aligned_cols=355 Identities=11% Similarity=0.078 Sum_probs=221.2
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|. ..+.. ++.+.+++.+++.+.. .+.......+.+..+++.|....+. ..+.+++++++++|.+
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGsEAve 115 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI-HYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSFGLSGSDAND 115 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhcc-CccccccCcHHHHHHHHHHHHhCCC--CCCEEEEcCCHHHHHH
Confidence 677899999885 33443 7889999999987632 2222223345666777777654332 2368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHH-HHHcCC------------EEEEecCcCCC--CCc--------cCHHhHhhh
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEM-ARIADA------------TPVILPTRISE--NFL--------LDPKVLESK 223 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~-~~~~g~------------~~~~v~~~~~~--~~~--------~d~~~l~~~ 223 (470)
.+++... .....|+...-+|++.... +...|. .+..+|..... .+. .+++.+++.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (443)
T PRK08360 116 GAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEK 195 (443)
T ss_pred HHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHH
Confidence 9988642 2235788888888886532 222221 12222221100 000 123445555
Q ss_pred cc-----CCceEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEe
Q 012124 224 LT-----EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 297 (470)
Q Consensus 224 l~-----~~~~~i~l~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 297 (470)
+. +++++|++...+||+|.+++ .+.+++|.++|++| |+++|+||+|..|.+.+.. .....+.- ... +-
T Consensus 196 l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~G~~-~a~~~~~~-~pD---ii 269 (443)
T PRK08360 196 FEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH-GILLVVDEVQSGLGRTGKW-FAIEHFGV-EPD---II 269 (443)
T ss_pred HHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCccc-hhhhhcCC-CCC---EE
Confidence 52 46778877656899999887 66899999999999 9999999999987655432 11111211 122 23
Q ss_pred ccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 012124 298 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 377 (470)
Q Consensus 298 S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 377 (470)
+|||.++ +|+|+||+++++++++.+.......+++.+++.+.++.++|+.-.. ++.++++++.-...++.|.+...+.
T Consensus 270 tlsK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~ 347 (443)
T PRK08360 270 TLGKPLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-KNLLKRAEKLGNYTKKRLEEMKKKH 347 (443)
T ss_pred Eeccccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899998 9999999999999999887655556778899999999888874111 1223333333232333333322233
Q ss_pred CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHH
Q 012124 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVE 455 (470)
Q Consensus 378 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~ 455 (470)
+-+.... .-|+++-+++.+....... .......+.+.|+++ ||.+.+.. .+.+|++.. .++++++++++
T Consensus 348 ~~v~~vr-g~Gl~~gie~~~~~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~ 418 (443)
T PRK08360 348 ELIGDVR-GIGLMIGVDLVKDRETKER---AYEEAAKVVWRAWEL-GLIVTFFS----GNVLRIQPPLTIEKEVLDEGLD 418 (443)
T ss_pred CCeeeee-ccceEEEEEEecCCcccCc---cHHHHHHHHHHHHHC-CeEEeecC----CCEEEEeCCCCCCHHHHHHHHH
Confidence 3222222 2355566665321000000 000234677777765 99886531 367999655 49999999999
Q ss_pred HHHHHHHhhCC
Q 012124 456 RIKKGLLTLRP 466 (470)
Q Consensus 456 ~l~~~l~~~~~ 466 (470)
+|.++++++..
T Consensus 419 ~l~~~l~~~~~ 429 (443)
T PRK08360 419 ILEEAIEDVEE 429 (443)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 216
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=4.9e-21 Score=188.85 Aligned_cols=329 Identities=15% Similarity=0.134 Sum_probs=203.5
Q ss_pred CeEEccCCC-CCCCChHHHHHHHHHHHHcC--------CCCCC--CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 95 SVIRLAAGE-PDFDTPVLIAEAGINAIREG--------FTRYT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 95 ~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~--------~~~y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
.+++|++++ .++..++.+.+++.+++... .+..+ -..|..++.+.+.+.+.+.+|. ++.+++++|.
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~---~~~l~~~sG~ 81 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA---PEAFIVPSGY 81 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC---CeEEEECChH
Confidence 568999887 56666777777776666542 11111 1123334444444444433453 2346777777
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCC
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 237 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~ 237 (470)
. ++..+...+.++||.|+++.-.|......++......+.++. .|++.|++.++. ++++|++++++
T Consensus 82 ~-a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 82 M-ANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred H-HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 5 444555556678888888787887777777665444444432 588999988852 34566678999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
|+||...| +++|.++|+++ |+++++|++|+...++.........+.. .+..+.+.||||.+|..| +.++..+
T Consensus 154 s~~G~i~p---l~eI~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~-~~~~~~~~tlsK~~g~~G---~~vl~~~ 225 (370)
T PRK05937 154 SFKGTLAP---LEQIIALSKKY-HAHLIVDEAHAMGIFGDDGKGFCHSLGY-ENFYAVLVTYSKALGSMG---AALLSSS 225 (370)
T ss_pred CCCCCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCchHHhhCC-CCCcEEEEechhhhhcCc---eEEEcCH
Confidence 99999999 88899999999 9999999999864443221111111111 122367899999998556 3345556
Q ss_pred HHHHHHHHHhh--hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeec
Q 012124 318 HFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 395 (470)
Q Consensus 318 ~~~~~l~~~~~--~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~ 395 (470)
++...+..... .+..+.+++...++.++++. ..+.....++++++.++++.+.|... + +. ....+.+
T Consensus 226 ~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~---l~~~~~~~~~~l~~l~~~l~~~l~~~-~-----~~--~~~~i~~ 294 (370)
T PRK05937 226 EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDF---LSQEGELARKQLFRLKEYFAQKFSSA-A-----PG--CVQPIFL 294 (370)
T ss_pred HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHH---HHhCcHHHHHHHHHHHHHHHHhcCCC-C-----CC--CEEEEEe
Confidence 66555543211 22334566666555555543 11112345566777777887777542 1 00 0111234
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 467 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~~~ 467 (470)
+.. +...+.+.|.++ ||.+... .+...+++|++++. +++|++.+++.|+++++++...
T Consensus 295 ~~~------------~~~~~~~~L~~~-gi~v~~~-~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 295 PGI------------SEQELYSKLVET-GIRVGVV-CFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred CCh------------hHHHHHHHHHHC-CeeEEee-CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 432 456777776555 9988642 22335689999986 9999999999999999887644
No 217
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=3.5e-21 Score=191.93 Aligned_cols=351 Identities=13% Similarity=0.130 Sum_probs=223.4
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+ +.......+....+++.+.+..+.. ..+.+++++++++|.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~e 115 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH-TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGAEAVE 115 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC-cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHH
Confidence 67789999988643 333 78899999999876321 1111122345555666666543311 1268999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCC-------------EEEEecCcCCCCCccC----HHhHhhhcc---
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISENFLLD----PKVLESKLT--- 225 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~~~d----~~~l~~~l~--- 225 (470)
.+++... ....+|+...-+|++....... .|. .++.+|...+. .+.+ ++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~ 194 (425)
T PRK07495 116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKADV 194 (425)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhcc
Confidence 9888642 2236788888899887543222 111 22334432211 1122 444566653
Q ss_pred --CCceEEEEcC-CCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc
Q 012124 226 --EKSRLLILCS-PSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 226 --~~~~~i~l~~-p~nPtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK 301 (470)
+++.+|++.. .+| +| .++|.+.+++|.++|++| |+++|+||+|..|...+. +..+.. .+.+..+.+|||
T Consensus 195 ~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~----~~a~~~-~gv~pDi~tlsK 267 (425)
T PRK07495 195 DPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQH-GILLIADEVQTGFARTGK----LFAMEH-HEVAADLTTMAK 267 (425)
T ss_pred CCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHc-CCEEEEechhhcCCcCCC----ceeecc-cCCCCCEEeehh
Confidence 3566776643 356 88 568999999999999999 999999999998755442 122222 244556899999
Q ss_pred ccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhc---CCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 012124 302 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL---GYAGGEVVSKMVKAFRERRDFLVKSFGELE 378 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 378 (470)
.++ +|+|+|++++++++++.+.......+++.+++.+.++.+.++. +.+ .++++++.+.++++.+.+.+ ++|
T Consensus 268 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l-~~~~~~~g~~l~~~L~~l~~---~~~ 342 (425)
T PRK07495 268 GLA-GGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDL-CERANQLGNRLKQRLASLRE---TVP 342 (425)
T ss_pred hhc-CCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHh---hCC
Confidence 998 9999999999999988876545556778999999966666553 221 23344444444444433332 233
Q ss_pred CC-eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHH
Q 012124 379 GV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVE 455 (470)
Q Consensus 379 g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~ 455 (470)
.+ .+.. .|+++|+++.+.-.... .......+.+.++++ ||.+.+.... .+.+||.... ++++++++++
T Consensus 343 ~i~~vrG--~Gl~~~iel~~~~~~~~----~~~~~~~~~~~~~~~-Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~~~~ 413 (425)
T PRK07495 343 EIADIRG--PGFMNAVEFNDADSGLP----SAEFANRVRLKALEK-GLILLTCGVH--GNVIRFLAPITIQDDVFAEALD 413 (425)
T ss_pred Ceeeeec--CceEEEEEEecCCCCCc----cHHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEeCCCccCHHHHHHHHH
Confidence 32 2322 38889999853200000 000134566666655 8988663221 3789998664 9999999999
Q ss_pred HHHHHHHhhCC
Q 012124 456 RIKKGLLTLRP 466 (470)
Q Consensus 456 ~l~~~l~~~~~ 466 (470)
+|++++++++.
T Consensus 414 ~l~~~l~~~~~ 424 (425)
T PRK07495 414 ILEASILEASA 424 (425)
T ss_pred HHHHHHHHHhc
Confidence 99999988764
No 218
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=4.6e-21 Score=188.32 Aligned_cols=299 Identities=17% Similarity=0.221 Sum_probs=206.7
Q ss_pred HHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCCCCChH
Q 012124 114 EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYP 192 (470)
Q Consensus 114 ~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~ 192 (470)
+++.+.+..+.. .......++++.+++++. .+++++++|+++++..++.++ .++||+|+++.++|..+.
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~ 72 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA 72 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH
Confidence 455666665443 234467889999998863 246888889999999999998 689999999999999999
Q ss_pred HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc
Q 012124 193 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272 (470)
Q Consensus 193 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~ 272 (470)
..+...|++++.++++. +++.+|++.+++.+++++++|+++ ||+|...+ +++|.++|+++ +++||+|++++.
T Consensus 73 ~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~-~i~li~D~a~~~ 144 (352)
T cd00616 73 NAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPV---HLYGNPAD---MDAIMAIAKRH-GLPVIEDAAQAL 144 (352)
T ss_pred HHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCC---HHHHHHHHHHc-CCeEEEECCCCC
Confidence 99999999999999864 356789999999998889988875 47999888 78888999999 999999999975
Q ss_pred cccCCCCcccccccCCCCCceEEEeccC--cccccccceeeEEEcC-HHHHHHHHHHhhhcc---------------CCC
Q 012124 273 IIYAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT---------------SGA 334 (470)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~i~i~S~s--K~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~---------------~~~ 334 (470)
...... .. +.. ...+.+.||+ |.++ +.+.|+++.+ +++.+.+........ ...
T Consensus 145 g~~~~~--~~---~~~--~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd00616 145 GATYKG--RK---VGT--FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRL 215 (352)
T ss_pred CCeECC--EE---ccc--CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCc
Confidence 321110 01 111 1235677776 8874 3356888775 578777765433211 112
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc-----eEEEeeeccC--ccCCcccCCC
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG-----AFYLFIDFST--YYGSEAEGFG 407 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-----g~~~~~~~~~--~~~~~~~~~~ 407 (470)
+.+...++... .+.+++..++.+++.+++.+.|.+++|+++..+.. ...+.+.+++ ..
T Consensus 216 ~~~~aa~~~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 280 (352)
T cd00616 216 SEIQAAIGLAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGE-------- 280 (352)
T ss_pred CHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCC--------
Confidence 22222222221 23356666777888889999999888887754322 2334445543 21
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCC----------------C-------CCcEEEEeec--CHHHHHHHHHHHH
Q 012124 408 KIENSESLCRYLLDKAQVALVPGDAFG----------------D-------DTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 408 ~~~~~~~l~~~L~~~~gI~v~pg~~f~----------------~-------~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
+..++.+.|.++ ||.+....... . .+.+|+++.. ++++|+..++.|+
T Consensus 281 ---~~~~v~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 ---SRDELIEALKEA-GIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ---CHHHHHHHHHHC-CCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 678898888665 88654211100 0 1579999986 9999999888763
No 219
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.90 E-value=5.2e-21 Score=188.62 Aligned_cols=216 Identities=15% Similarity=0.208 Sum_probs=164.8
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEec
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILP 206 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 206 (470)
.-..+|++.++++. | .+++++++++++++..++.+++++||+|+++.+.|.+.. ..++..|++++.++
T Consensus 54 p~~~~le~~la~l~----g----~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~ 125 (380)
T TIGR01325 54 PTVAAFEERIAALE----G----AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVD 125 (380)
T ss_pred chHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEEC
Confidence 34677888888764 3 257888999999999999999999999999999887643 35667899998887
Q ss_pred CcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc
Q 012124 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 286 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~ 286 (470)
.+ |++.+++++++++++|++++|+||+|...+ +++|.++|+++ |+++|+|++|....+.. ++ .
T Consensus 126 ~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~-gi~livD~a~~~~~~~~----pl-~- 188 (380)
T TIGR01325 126 PT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAI-GALLVVDNVFATPVLQQ----PL-K- 188 (380)
T ss_pred CC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccCC----ch-h-
Confidence 62 789999999889999999999999999998 88899999999 99999999998643221 11 1
Q ss_pred CCCCCceEEEeccCccccccccee-eEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012124 287 PGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 365 (470)
Q Consensus 287 ~~~~~~~i~i~S~sK~~~~~G~r~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 365 (470)
.+..|++.|++|.++.+|.++ |++++++++++.+...........+++...+ ++.. -+.+....++..+
T Consensus 189 ---~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~---~l~~----l~tl~~r~~~~~~ 258 (380)
T TIGR01325 189 ---LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWV---LLKG----LETLSLRMQKQFD 258 (380)
T ss_pred ---hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHH---HHhc----cCcHHHHHHHHHH
Confidence 234588899999997677776 7888899998888876655555555554333 3332 2334445566677
Q ss_pred HHHHHHHHhccCCCCe
Q 012124 366 RRDFLVKSFGELEGVK 381 (470)
Q Consensus 366 ~~~~l~~~L~~~~g~~ 381 (470)
+++.+.+.|++.|+++
T Consensus 259 ~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 259 SALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHcCCCcc
Confidence 7778888888776653
No 220
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.90 E-value=2.1e-21 Score=193.69 Aligned_cols=332 Identities=15% Similarity=0.135 Sum_probs=220.8
Q ss_pred cCCCeEEccCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++||.+|...... ++.+.+++.+++.+..... + ....+....+++.+.+.+| .+.+++++++++|..
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~-~-~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGs~A~e 108 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSS-R-AFYNDVFGEFAEYVTKLFG----YDKVLPMNTGAEAVE 108 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccc-c-ccCCHHHHHHHHHHHhhcC----CCEEEEeCccHHHHH
Confidence 57788999988655443 7899999998886522111 1 1123444555555555444 358999999999999
Q ss_pred HHHHHhc---------CC-CCeEEEcCCCCCCh-HHHHHHcCC------------EEEEecCcCCCCCccCHHhHhhhcc
Q 012124 169 QAVLAVC---------SP-GDEVIIPAPFWVSY-PEMARIADA------------TPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 169 ~~~~~l~---------~~-gd~Vlv~~p~y~~~-~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.+++.+. .+ .+.|+...-+|++. ...+...|. .++.++. .|++.|++.++
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~ 181 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALE 181 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 9998752 13 36777788888864 333333221 1233332 27888888874
Q ss_pred ---CCceEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc
Q 012124 226 ---EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 226 ---~~~~~i~l~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK 301 (470)
+++.+|++...++++|...+ .+.+++|.++|++| ++++|.||+|..+.+.+.. ... ...+....++ +|||
T Consensus 182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~g~~G~~-~~~-~~~~~~~di~---~~gK 255 (401)
T TIGR01885 182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH-NVLLIADEIQTGLGRTGKL-LCV-DHENVKPDIV---LLGK 255 (401)
T ss_pred hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchh-hHH-hhcCCCCCEE---Eeec
Confidence 35667777778999999886 55799999999999 9999999999876554431 111 1221112222 4789
Q ss_pred ccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC-CC
Q 012124 302 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GV 380 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~ 380 (470)
.++..++|+||+++++++++.+.......+++.+++.+.++.++|+.- ++ ..+.++.++..+++.+.|++++ ++
T Consensus 256 ~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i---~~--~~l~~~~~~~~~~~~~~L~~l~~~~ 330 (401)
T TIGR01885 256 ALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVL---EE--EKLAENAEKLGEIFRDQLKKLPKPI 330 (401)
T ss_pred cccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHhccCCc
Confidence 998555899999999999888765333346677899999998888742 21 1234556666788888888762 22
Q ss_pred -eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHH
Q 012124 381 -KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERI 457 (470)
Q Consensus 381 -~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l 457 (470)
....+.+.+ ..+.++.... ..+..+++++|.++ ||.+.|+. ++.+|++.+ .++++|++++++|
T Consensus 331 ~~~~~g~g~~-~~i~~~~~~~--------~~~~~~l~~~l~~~-Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l 396 (401)
T TIGR01885 331 ITEVRGRGLL-NAIVIDESKT--------GRTAWDLCLKLKEK-GLLAKPTH----GNIIRLAPPLVITEEQLDEGLEII 396 (401)
T ss_pred eeEEeecCee-EEEEeccCcc--------hhHHHHHHHHHHhC-CEEEEecC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence 222334444 3334432100 01456788888755 99998753 578999986 4999999999999
Q ss_pred HHHH
Q 012124 458 KKGL 461 (470)
Q Consensus 458 ~~~l 461 (470)
++++
T Consensus 397 ~~~l 400 (401)
T TIGR01885 397 KKVI 400 (401)
T ss_pred HHHh
Confidence 9876
No 221
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.90 E-value=1.5e-21 Score=193.27 Aligned_cols=217 Identities=14% Similarity=0.191 Sum_probs=163.7
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEe
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY----PEMARIADATPVIL 205 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v 205 (470)
.+...+|++.++++. | .++.+++++++.++..++.+++++||+|+++...|.+. ...++..|++++.+
T Consensus 69 ~p~~~~le~~lA~l~----g----~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v 140 (403)
T PRK07810 69 NPTVSMFEERLRLIE----G----AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV 140 (403)
T ss_pred CchHHHHHHHHHHHh----C----CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE
Confidence 334667888888775 3 34788888888999999999999999999988666443 34567789999998
Q ss_pred cCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 206 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 206 ~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
+. .|++.+++++++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|+...+.. ++ .
T Consensus 141 d~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~~----~~-~ 204 (403)
T PRK07810 141 DG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAA-GAKVVLDNVFATPLLQR----GL-P 204 (403)
T ss_pred CC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCCccccCC----hh-h
Confidence 74 3889999999999999999999999999998 88999999999 99999999998643321 11 1
Q ss_pred cCCCCCceEEEeccCccccccccee-eEEEcCHHHHH-HHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 286 LPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~~G~r~-G~~~~~~~~~~-~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
.+..+++.|++|.++..|.++ ||++++++.+. .++........+.+++.+.++...|+. +..+.++.
T Consensus 205 ----~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t-------l~~R~~~~ 273 (403)
T PRK07810 205 ----LGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET-------LALRVRHS 273 (403)
T ss_pred ----cCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-------HHHHHHHH
Confidence 244689999999997678887 88888887665 455555555667788877776665553 33444444
Q ss_pred HHHHHHHHHHhccCCCCe
Q 012124 364 RERRDFLVKSFGELEGVK 381 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~ 381 (470)
.++...+.+.|++.|++.
T Consensus 274 ~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 274 NASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 556666667777766653
No 222
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=6.9e-21 Score=187.51 Aligned_cols=215 Identities=13% Similarity=0.125 Sum_probs=159.4
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH---HHcCCEEEEec
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILP 206 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~v~ 206 (470)
.+...+|++.+++++. .+++++++|+++|+..++.+++++||+|+++.|+|.++...+ ...|+++..+.
T Consensus 52 np~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 52 NPTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred CccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 3466789999998862 357888999999999999999999999999999999987766 44577766543
Q ss_pred CcCCCCCccCHHhHhhhccC-CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 207 TRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
+|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++ |++||+|++|+..... .++
T Consensus 124 --------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~-gi~livD~t~a~~~~~----~~l-- 185 (385)
T PRK08574 124 --------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKEL-GAILVVDNTFATPLLY----RPL-- 185 (385)
T ss_pred --------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCccccC----Chh--
Confidence 478999999987 8999999999999999999 77899999999 9999999999642111 111
Q ss_pred cCCCCCceEEEeccCcccccccce-eeEEE-cCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 286 LPGMWERTLTVNGFSKAFAMTGWR-LGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~~G~r-~G~~~-~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
. .+..+++.|++|.++.+|-. .|+++ .++++.+.+...+...+.+.+++....+...++. +....++.
T Consensus 186 -~--~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-------L~~R~~~~ 255 (385)
T PRK08574 186 -R--HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-------LEVRFERQ 255 (385)
T ss_pred -h--hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-------HHHHHHHH
Confidence 1 24569999999999645654 47555 5788888887777666666666644433333332 33344444
Q ss_pred HHHHHHHHHHhccCCCC
Q 012124 364 RERRDFLVKSFGELEGV 380 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~ 380 (470)
.++...+.+.|++.|.+
T Consensus 256 ~~na~~la~~L~~~p~v 272 (385)
T PRK08574 256 CRNAMAIAEFLSEHPKV 272 (385)
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 55666677777766554
No 223
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.90 E-value=3e-21 Score=190.77 Aligned_cols=314 Identities=18% Similarity=0.224 Sum_probs=224.9
Q ss_pred CChHHHHHHHHHHHHcCC-----CCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHHHHHHHHh---cCC
Q 012124 107 DTPVLIAEAGINAIREGF-----TRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAVLAV---CSP 177 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~~~-----~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al~~~~~~l---~~~ 177 (470)
+.|+.+.+++.+.+.+.. ..+.......+..+.+.+.+.+..|. ++ ++|++++|++++++.++..+ +++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~--~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGA--PPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTS--STTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCC--ccccccccccccchhhhhhhhcccccccc
Confidence 357889999988876421 11211222344444444444444563 55 79999999999999999999 789
Q ss_pred CCeEEEcCCCCCChHH----HHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 178 GDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 178 gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
||+|++.+-.|++... +.+..|+++..++.+.++ .+|++.+++.+++++++++++..+|-||...| +++|.
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i~~I~ 162 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNPDTRLVSISHVENSTGVRNP---IEEIA 162 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHTTESEEEEESBETTTTBBSS---HHHHH
T ss_pred ccccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhccccceEEeecccccccEEee---eceeh
Confidence 9999999999887663 344679999999886443 48999999999999999999999999999999 88999
Q ss_pred HHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh-----
Q 012124 254 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS----- 328 (470)
Q Consensus 254 ~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~----- 328 (470)
++|+++ ++++++|.+++.. .....+.. .+-.++++|..|.+|.+ .+|+++.+++.++.+.....
T Consensus 163 ~~~~~~-~~~~~vD~~~~~g----~~~id~~~----~~~D~~~~s~~Kl~gp~--G~g~l~v~~~~~~~~~p~~~~~~~~ 231 (371)
T PF00266_consen 163 KLAHEY-GALLVVDAAQSAG----CVPIDLDE----LGADFLVFSSHKLGGPP--GLGFLYVRPEAIERLRPAKPGGGYL 231 (371)
T ss_dssp HHHHHT-TSEEEEE-TTTTT----TSS--TTT----TTESEEEEESTSTTSSS--TEEEEEEEHHHHHHHHTSSSSSSTT
T ss_pred hhhhcc-CCceeEechhccc----cccccccc----cccceeeecccccCCCC--chhhheehhhhhhcccccccccccc
Confidence 999999 9999999998752 22222222 34558999999944434 48999999988888732111
Q ss_pred ----------------hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC----Cce
Q 012124 329 ----------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGA 388 (470)
Q Consensus 329 ----------------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~~g 388 (470)
.....++.....++..+++.- .+..+++++++..+..+++.+.|.+++++.+..| ..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (371)
T PF00266_consen 232 DFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLL--EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRP 309 (371)
T ss_dssp THHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGT
T ss_pred ccccchhcccccccccccccceeeehhhhHHHHHhhh--hccccccchhhhhhHHHHHHhhhhcCCceeEeeeccccccc
Confidence 111235555555656666541 1455778888899999999999999988777543 223
Q ss_pred EEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------CCCcEEEEeec--CHHHHHHH
Q 012124 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--------DDTCIRISYAA--SLTTLQAA 453 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~--------~~~~iRls~~~--~~~~i~~~ 453 (470)
-.+.+.++.. +...+.+.|.++ ||.+..|..+. ..+.+|+|++. +++|++++
T Consensus 310 ~i~~~~~~~~------------~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 310 SIVSFNLPGS------------DADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TEEEEEETTS------------SHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ceEEEeecCC------------CHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 3355566543 788898888777 99999987654 24899999987 88998864
No 224
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=3.4e-21 Score=190.25 Aligned_cols=215 Identities=14% Similarity=0.137 Sum_probs=157.3
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEec
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILP 206 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 206 (470)
+...+|++.++++. | .+++++++|+++|+.+++.++++|||+|++++|+|..+.. .+...|++++.++
T Consensus 65 pt~~~Le~~lA~l~----g----~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 136 (394)
T PRK07050 65 PTSLALAQRLAEIE----G----GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYD 136 (394)
T ss_pred HHHHHHHHHHHHHh----C----CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEEC
Confidence 34456666666653 3 4689999999999999999999999999999999998774 4567899998886
Q ss_pred CcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc
Q 012124 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 286 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~ 286 (470)
.. +.+.+++++++++++|++++|+||+|.. .++++|+++|+++ |++||+|++|....+ ...+
T Consensus 137 ~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~-gi~livD~a~a~~~~-------~~~l 198 (394)
T PRK07050 137 PL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARAR-GVVTAIDNTYSAGLA-------FKPF 198 (394)
T ss_pred CC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHc-CCEEEEECCcccccc-------cCHH
Confidence 42 4477888999999999999999999754 4599999999999 999999999975221 1112
Q ss_pred CCCCCceEEEeccCcccc-cccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 012124 287 PGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 364 (470)
Q Consensus 287 ~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 364 (470)
. .+..+++.|++|.++ -.+.+.|++++ +++++++++..+...+.+.+++....+...++ . +....++..
T Consensus 199 ~--~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~------t-l~~Rl~~~~ 269 (394)
T PRK07050 199 E--HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP------S-LQVRLAAHD 269 (394)
T ss_pred H--cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC------c-HHHHHHHHH
Confidence 1 245699999999995 23456888775 77888888877776666777766543333222 2 222334444
Q ss_pred HHHHHHHHHhccCCCC
Q 012124 365 ERRDFLVKSFGELEGV 380 (470)
Q Consensus 365 ~~~~~l~~~L~~~~g~ 380 (470)
++...+.+.|++.|++
T Consensus 270 ~~a~~la~~L~~~p~v 285 (394)
T PRK07050 270 RSALEVAEWLKARPEI 285 (394)
T ss_pred HHHHHHHHHHHhCCCc
Confidence 5555666777665544
No 225
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.90 E-value=7.2e-21 Score=189.37 Aligned_cols=344 Identities=12% Similarity=0.067 Sum_probs=219.7
Q ss_pred cCCCeEEccCCCCCC--CC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCC-CCCcEEE-ecChHHH
Q 012124 92 AGVSVIRLAAGEPDF--DT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSY-TPDQILV-SNGAKQS 166 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~--~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~-~~~~i~i-t~g~~~a 166 (470)
+|+.+||+..|.... .. ++.+.+++.+++.+....+ ......+.+..+++.+.+....+. ..+.+++ +++++++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA 111 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNA 111 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhcccee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHH
Confidence 677889998886433 33 7999999999987522111 111224566667776654321111 1135655 5899999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCC------------EEEEecCcCCCC-CccCHHhHhhhcc-----
Q 012124 167 ILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN-FLLDPKVLESKLT----- 225 (470)
Q Consensus 167 l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~-~~~d~~~l~~~l~----- 225 (470)
.+.+++... ....+|+....+|++....+.. .|. .++.+|...... ..-+++.+++.+.
T Consensus 112 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 191 (412)
T TIGR02407 112 VESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSG 191 (412)
T ss_pred HHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCC
Confidence 999988753 2236788889999987654332 221 223333311000 0014667777774
Q ss_pred -CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEeccCcc
Q 012124 226 -EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 226 -~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
+++.+|++...++++|. ..|++.+++|.++|++| |+++|+||++..|...+... .....+.+ | +.+|||.
T Consensus 192 ~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~~a~~~~~v~P--D----i~~~~K~ 264 (412)
T TIGR02407 192 VDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRH-DILLIVDDIQAGCGRTGTFFSFEPAGIEP--D----IVCLSKS 264 (412)
T ss_pred CCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchhHHhcccCCCC--C----EEEechh
Confidence 24567777666888998 67999999999999999 99999999998753322211 11123333 2 4468999
Q ss_pred cccc-cceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHh----cCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 012124 303 FAMT-GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG----LGYAGGEVVSKMVKAFRERRDFLVKSFGEL 377 (470)
Q Consensus 303 ~~~~-G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 377 (470)
++ + |+|+|++++++++ +.+.......+++.+++...++.+.++ .+.+ .++++++.+.++++.+.+.+. +
T Consensus 265 lg-~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l-~~~~~~~g~~l~~~l~~l~~~---~ 338 (412)
T TIGR02407 265 IS-GYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAF-EKAVQRKSEIIQERLDRIVAE---Y 338 (412)
T ss_pred cc-CCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHhh---C
Confidence 98 7 9999999998876 554433444566778886655555444 3222 344555555555555444443 3
Q ss_pred CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHH
Q 012124 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVE 455 (470)
Q Consensus 378 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~ 455 (470)
+++.......|+++|+++++.. ....+.+.++++ ||.+.+...+ .+.+|++... ++++++++++
T Consensus 339 ~~~~~~vrg~Gl~~~l~l~~~~-----------~~~~~~~~~~~~-Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~ 404 (412)
T TIGR02407 339 PELIKQVRGRGLMQGIECGDGD-----------LAGKIAKAAFEN-GLIIETSGPN--DEVIKLLPPLTIDEETLQQGLD 404 (412)
T ss_pred CCceEeeecceeEEEEEecChH-----------HHHHHHHHHHHC-CCEEeccCCC--CCEEEEECCCCCCHHHHHHHHH
Confidence 3333344566898999997531 356777777765 9999874322 4679988775 9999999999
Q ss_pred HHHHHHHh
Q 012124 456 RIKKGLLT 463 (470)
Q Consensus 456 ~l~~~l~~ 463 (470)
+|++++++
T Consensus 405 ~l~~~l~~ 412 (412)
T TIGR02407 405 ILEQAVEE 412 (412)
T ss_pred HHHHHHhC
Confidence 99998864
No 226
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=2.7e-21 Score=188.72 Aligned_cols=284 Identities=12% Similarity=0.145 Sum_probs=191.8
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE-EEEecC
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-PVILPT 207 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~ 207 (470)
+.+...+|+++++++. ..+++++++|+++|+.+++. ++++||+|+++.+.|......+...-.+ .+.+.
T Consensus 52 ~~p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~- 121 (364)
T PRK07269 52 KNPTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT- 121 (364)
T ss_pred CCccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEE-
Confidence 4456789999999985 45799999999999999884 6699999999999998766544332111 11111
Q ss_pred cCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC
Q 012124 208 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 287 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~ 287 (470)
+.+|++.+++++++++|+|++++|+||||.+.+ +++|+++|+++ |+++|+|++|..-.+. .++.
T Consensus 122 -----~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~-gi~vvvD~t~~~~~~~----~pl~--- 185 (364)
T PRK07269 122 -----YANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAK-GAKVIVDNTFYSPIYQ----RPIE--- 185 (364)
T ss_pred -----ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cchh---
Confidence 225899999999999999999999999999987 88999999999 9999999997542211 1221
Q ss_pred CCCCceEEEeccCccccccc-ceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012124 288 GMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 365 (470)
Q Consensus 288 ~~~~~~i~i~S~sK~~~~~G-~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 365 (470)
.+-.+++.|++|.++-+| .=.|++++ ++++.+++...+.....+.+++....+...|+ .+..+.++.++
T Consensus 186 --~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~-------tL~~r~~~~~~ 256 (364)
T PRK07269 186 --LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK-------TLSLRMERSTA 256 (364)
T ss_pred --hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHHHHHHHHHH
Confidence 234499999999996223 12588887 56788878766655555667776555444443 25556666677
Q ss_pred HHHHHHHHhccCCCC-eec-CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHH---------HHcCCEEEECCCCCC
Q 012124 366 RRDFLVKSFGELEGV-KMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL---------LDKAQVALVPGDAFG 434 (470)
Q Consensus 366 ~~~~l~~~L~~~~g~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L---------~~~~gI~v~pg~~f~ 434 (470)
+...+.+.|++.|++ .+. ++.+|++.+ .+... .....|...| .....+.+.|+..+.
T Consensus 257 na~~~a~~L~~~p~v~~v~ypg~gg~~sf-~~~~~-----------~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~ 324 (364)
T PRK07269 257 NAQEVVAFLKKSPAVKEVLYTGKGGMISF-KVADE-----------TRIPHILNSLKVFTFAESLGGVESLITYPTTQTH 324 (364)
T ss_pred HHHHHHHHHHhCCCccEEeCCCcCcEEEE-EECCH-----------HHHHHHHHhCCcceEccCCCCcCeEeeCCccccc
Confidence 888888888888775 343 667777444 44221 0223333332 222244555644321
Q ss_pred -------------CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 435 -------------DDTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 435 -------------~~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
.++-+|||++.. +.+..++.|++++
T Consensus 325 ~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al 362 (364)
T PRK07269 325 ADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQAL 362 (364)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 135799999983 3445555555554
No 227
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=5e-21 Score=180.54 Aligned_cols=332 Identities=16% Similarity=0.221 Sum_probs=234.4
Q ss_pred hcCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 91 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 91 ~~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
.+|+.+|||..|.- .+.. +|.+++++.++..+- ...| ..+.+..+++.|.+..+ ..|.++++|+++
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~-----~~~~~~~la~~L~~~s~---~~d~vff~NSGa 110 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF-----YNEPQAELAEKLVELSP---FADRVFFCNSGA 110 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc-----CChHHHHHHHHHHhhCc---cccEEEEcCCcH
Confidence 36889999998873 4444 899999999987652 2223 23567777777765433 368999999999
Q ss_pred HHHHHHHHHhc---C-C-CCeEEEcCCCCCChHHHHHHcCCE-------------EEEecCcCCCCCccCHHhHhhhccC
Q 012124 165 QSILQAVLAVC---S-P-GDEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 165 ~al~~~~~~l~---~-~-gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
||++.+++... . + ..+|+...-+|++-....-+.+.+ +..+|. -|++++++++++
T Consensus 111 EA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai~~ 183 (404)
T COG4992 111 EANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAIDE 183 (404)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHhcc
Confidence 99999998753 2 2 236777777777644332222222 223332 189999999999
Q ss_pred CceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 227 KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
++.+|++...|--.|+ +.+++.++++.++|++| |+++|.||++..+...|. ++.+.. .+..=-|-++.|.+|
T Consensus 184 ~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~-g~LLI~DEVQtG~GRTGk----~fA~e~-~gV~PDI~tlaK~Lg- 256 (404)
T COG4992 184 DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEH-GALLILDEVQTGLGRTGK----LFAYEH-YGVEPDILTLAKALG- 256 (404)
T ss_pred CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHh-CeEEEEeccccCCCccch----HHHHHH-hCCCCCEEEeecccc-
Confidence 9999999888988887 45778899999999999 999999999998755443 221110 011111556889998
Q ss_pred ccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCCe
Q 012124 306 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVK 381 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~ 381 (470)
.|+++|.+++.+.+.+.+..-....+++.|+++..++.+.|+--.. ++.+++. +++-++|.+.|++ ++ +-
T Consensus 257 GG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~-e~ll~~v----~~~g~~~~~~L~~l~~~~~-~v 330 (404)
T COG4992 257 GGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE-EGLLENV----REKGEYLLQRLRELKRRYP-LV 330 (404)
T ss_pred CCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc-hhHHHHH----HHHHHHHHHHHHHHhhcCC-ce
Confidence 9999999999966677676666678899999999999888874221 3344444 4444455555544 32 21
Q ss_pred ecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012124 382 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 382 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
.....-|+.+-+.+...+ ...++++.|.++ ||++.+.. ++.+|+.... +++++++++++|++
T Consensus 331 ~~vRG~GLmiGiel~~~~-----------~a~~~~~~~~~~-gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~ 394 (404)
T COG4992 331 KEVRGRGLMIGIELKEPY-----------RARDIVRALREE-GVLVLPAG----PNVIRFLPPLVITEEEIDEALDALER 394 (404)
T ss_pred eeeecceeEEEEEecCcc-----------cHHHHHHHHHHC-CeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHH
Confidence 112344787888886531 367888888766 89887743 5689998776 99999999999999
Q ss_pred HHHhhCC
Q 012124 460 GLLTLRP 466 (470)
Q Consensus 460 ~l~~~~~ 466 (470)
+++.+..
T Consensus 395 ~l~~~~~ 401 (404)
T COG4992 395 ALAAASA 401 (404)
T ss_pred HHHHhhh
Confidence 9987654
No 228
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=9e-21 Score=187.25 Aligned_cols=281 Identities=14% Similarity=0.144 Sum_probs=189.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 208 (470)
..+|++.++++. |. +..+++++++.++..++.++++|||+|+++.+.|.+.. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g~----~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (389)
T PRK05968 65 VRAFEEMLAKLE----GA----EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG- 135 (389)
T ss_pred HHHHHHHHHHHh----CC----CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence 467788888775 32 23455566668999899889999999999999998754 455668999988874
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.|++.+++++ +++++|++++|+||+ ++..++++|+++|+++ |++||+|++|....+.. ++.
T Consensus 136 ------~d~~~l~~~i-~~tklV~ie~pt~~~---~~~~dl~~i~~la~~~-gi~vivD~a~a~~~~~~----p~~---- 196 (389)
T PRK05968 136 ------RDEEAVAKAL-PGAKLLYLESPTSWV---FELQDVAALAALAKRH-GVVTMIDNSWASPVFQR----PIT---- 196 (389)
T ss_pred ------CCHHHHHHhc-ccCCEEEEECCCCCC---CcHHHHHHHHHHHHHc-CCEEEEECCCcchhccC----chh----
Confidence 2889999988 578999998666655 5556699999999999 99999999997644321 111
Q ss_pred CCCceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHHhh-hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
.+..+++.|++|.++.+| .+.|++++++++++++..... ......+++.+..+...|+. +....++..++
T Consensus 197 -~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-------l~~r~~~~~~~ 268 (389)
T PRK05968 197 -LGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-------LPLRMKAHEAS 268 (389)
T ss_pred -cCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-------HHHHHHHHHHH
Confidence 133488889999997544 578999999999888876543 23445666665555444432 34444444556
Q ss_pred HHHHHHHhccCCCCeecC-C------------CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012124 367 RDFLVKSFGELEGVKMSE-P------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433 (470)
Q Consensus 367 ~~~l~~~L~~~~g~~~~~-~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f 433 (470)
.+.+.+.|++.|++.... | .+|+ +.+++.+.. +..+|++.|.. .++.+.-|..+
T Consensus 269 a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~-~sf~~~~~~-----------~~~~f~~~L~~-~~~~~s~G~~~ 335 (389)
T PRK05968 269 ALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGL-FSFIFREGI-----------DVRAFADALKL-FRLGVSWGGHE 335 (389)
T ss_pred HHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceE-EEEEECCHH-----------HHHHHHHhCCc-cEEecCCCCCC
Confidence 777888888888774332 3 1234 445664321 56778887743 35555444433
Q ss_pred C----------------------C-CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012124 434 G----------------------D-DTCIRISYAASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 434 ~----------------------~-~~~iRls~~~~~~~i~~~l~~l~~~l~~~ 464 (470)
. . ++.+|+|++.. +.++.++.|++++++.
T Consensus 336 slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 336 SLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAAA 387 (389)
T ss_pred ceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHHh
Confidence 2 1 35899999982 2334444555555443
No 229
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=3.5e-20 Score=182.35 Aligned_cols=290 Identities=16% Similarity=0.190 Sum_probs=191.6
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCC
Q 012124 125 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 200 (470)
Q Consensus 125 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 200 (470)
..|+.. |.+ -++.+.+.+.+..|. ++++++++++.++..++. ++++||+|+++++.|.++... +...|+
T Consensus 39 ~~Y~r~-~~p-~~~~le~~la~l~g~----~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 111 (378)
T TIGR01329 39 YDYTRS-GNP-TRTALESLLAKLDKA----DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGV 111 (378)
T ss_pred CccCCC-CCh-HHHHHHHHHHHHhCC----CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCc
Confidence 456543 332 245555555554553 567777777789998776 779999999999999887653 456899
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 280 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~ 280 (470)
+++.++. .|++.+++++++++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|.... ..
T Consensus 112 ~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~-g~~vivD~a~~~~~----~~ 176 (378)
T TIGR01329 112 VVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQ-NALVVVDNTMMSPL----LC 176 (378)
T ss_pred EEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCcccc----cC
Confidence 9999986 2889999999999999999999999999998 89999999999 99999999985321 11
Q ss_pred ccccccCCCCCceEEEeccCccccc-ccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHH
Q 012124 281 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 358 (470)
Q Consensus 281 ~~~~~~~~~~~~~i~i~S~sK~~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 358 (470)
.++ .+ +-.+++.|++|.++- .+...|++++ ++++.+++...+.....+.+++....+..-++ .+..
T Consensus 177 ~~l-~~----g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~-------tl~~ 244 (378)
T TIGR01329 177 NPL-EL----GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK-------TLAI 244 (378)
T ss_pred Chh-hc----CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCC-------CHHH
Confidence 222 11 335999999998852 2467899987 55666777766665555566664433222222 2333
Q ss_pred HHHHHHHHHHHHHHHhccCCCCe-ec-------------C----CCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHH
Q 012124 359 MVKAFRERRDFLVKSFGELEGVK-MS-------------E----PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 420 (470)
Q Consensus 359 ~~~~~~~~~~~l~~~L~~~~g~~-~~-------------~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 420 (470)
+.++-.++...+.+.|++.|.+. +. . ..+|+ +.+.+.+. ....+|+..|
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~-~sf~~~~~-----------~~~~~~~~~L- 311 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSV-LSFETGSV-----------ALSKRLVEAT- 311 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceE-EEEEECCH-----------HHHHHHHHhC-
Confidence 34444555555555665544331 11 0 12344 45566321 1266788877
Q ss_pred HcCCEEEECCCCCC-----------------------CCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012124 421 DKAQVALVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 421 ~~~gI~v~pg~~f~-----------------------~~~~iRls~~~~~~~i~~~l~~l~~~l~~ 463 (470)
+..++.+.-|.... .++.+|||++.. +.+..++.|++++++
T Consensus 312 ~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 312 KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT 375 (378)
T ss_pred cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 45577776665432 025799999983 345556666666654
No 230
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=9.5e-20 Score=180.53 Aligned_cols=310 Identities=18% Similarity=0.164 Sum_probs=207.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 187 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~ 187 (470)
.+...+++.+.+..+.. .......+|++++++++. .++.++++|+++|+.+++.++ +++||+|+++.|+
T Consensus 9 ~~~~~~~v~~~~~~~~~--~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~ 78 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDFL--TQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPIT 78 (380)
T ss_pred CHHHHHHHHHHHhcCCc--cCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcc
Confidence 34557778888766543 334567899999999973 135667778999999999998 7899999999999
Q ss_pred CCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEE
Q 012124 188 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 263 (470)
Q Consensus 188 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~ 263 (470)
|+.+...++..|++++.++++++ ++.+|++.+++.++ +++++|++ .|++|...+ +++|.++|++| |++
T Consensus 79 ~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l~~~~-~~~ 150 (380)
T TIGR03588 79 FVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAALAKKH-GLK 150 (380)
T ss_pred hHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHHHHHc-CCE
Confidence 99999999999999999999753 46699999999998 68888874 457898877 88899999999 999
Q ss_pred EEEeccccccc-cCCCCcccccccCCCCCceEEEeccC--cccccccceeeEEEc-CHHHHHHHHHHhhhcc--------
Q 012124 264 VLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT-------- 331 (470)
Q Consensus 264 iI~Dd~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~s--K~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~-------- 331 (470)
||+|++++... +++. .+... ....+.+.||+ |.++ .| ..|+++. ++++.++++..+....
T Consensus 151 lI~D~a~a~g~~~~~~---~~g~~---~~~d~~~~S~~~~K~~~-~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (380)
T TIGR03588 151 IIEDASHALGAEYGGK---PVGNC---RYADATVFSFHPVKIIT-TA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFE 222 (380)
T ss_pred EEEECCCcccCccCCE---eCCCc---cccceEEEecCCCCccc-cc-CceEEEECCHHHHHHHHHHHHCCCCCCccccc
Confidence 99999998632 3321 11110 01246677775 8885 33 4576665 5677777665432111
Q ss_pred -----------------CCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC----ceEE
Q 012124 332 -----------------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFY 390 (470)
Q Consensus 332 -----------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~ 390 (470)
...+.+....+...|+ .++++.++-+++.+++.+.|.+++++....+. ..++
T Consensus 223 ~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~-------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 295 (380)
T TIGR03588 223 KQDEGPWYYEQQELGFNYRMTDIQAALGLSQLK-------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWH 295 (380)
T ss_pred ccccCcceeeeeccccccCccHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEE
Confidence 1112222122222222 24555566677777888888888766543321 1222
Q ss_pred E-eeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC-----------C---CC-------CcEEEEeec--C
Q 012124 391 L-FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-----------G---DD-------TCIRISYAA--S 446 (470)
Q Consensus 391 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f-----------~---~~-------~~iRls~~~--~ 446 (470)
+ .+.++... ..+.+++.+.|.++ ||.+...... . .+ ..++|.+.. +
T Consensus 296 ~~~i~~~~~~---------~~~r~~l~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~ 365 (380)
T TIGR03588 296 LYPILLDQEF---------GCTRKEVFEALRAA-GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380)
T ss_pred EEEEEECCcC---------CCCHHHHHHHHHHC-CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence 2 23343210 01578888888655 8987643211 0 01 457887775 8
Q ss_pred HHHHHHHHHHHHHHH
Q 012124 447 LTTLQAAVERIKKGL 461 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l 461 (470)
+++++..++.|++++
T Consensus 366 ~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 366 LEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999988763
No 231
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.88 E-value=4.3e-20 Score=184.75 Aligned_cols=347 Identities=11% Similarity=0.083 Sum_probs=212.5
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCC-CCcEEE-ecChHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-PDQILV-SNGAKQS 166 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~i~i-t~g~~~a 166 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+....+ ......+.+..+++.+.+....+.. .+.+++ ++++++|
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA 115 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITH-GLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNA 115 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccc-ccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHH
Confidence 67789999888643 333 7899999999887521111 1111235566666666543211111 225656 5899999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-C------------CEEEEecCcCCCC-CccCHHhHhhhccC----
Q 012124 167 ILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISEN-FLLDPKVLESKLTE---- 226 (470)
Q Consensus 167 l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~~-~~~d~~~l~~~l~~---- 226 (470)
.+.+++... ....+|+....+|++........ | ..+..+|...... ..-|++.+++.+.+
T Consensus 116 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (425)
T PRK09264 116 VEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195 (425)
T ss_pred HHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCC
Confidence 999888653 22367888888999876433221 1 0233444321000 00266778887742
Q ss_pred --CceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEeccCcc
Q 012124 227 --KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 227 --~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
++.+|++...+...|. +.+.+.+++|.++|++| |+++|+||++.+|...+... .....+.+ + +.+|||.
T Consensus 196 ~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~~~~~~~~v~P--D----i~t~~K~ 268 (425)
T PRK09264 196 VDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH-DILLIVDDIQAGCGRTGTFFSFERAGITP--D----IVTLSKS 268 (425)
T ss_pred CCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEechhhCCccccHHHHHhhcCCCC--C----EEEeccc
Confidence 3556666555666776 67899999999999999 99999999998754333211 01112332 2 4578999
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc----cCC
Q 012124 303 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG----ELE 378 (470)
Q Consensus 303 ~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~ 378 (470)
++..|+++|++++++++ ..+.......+++.+++...++.+.++.-.. + ....+..+++.+.+.+.|+ +.+
T Consensus 269 l~~~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~-~---~~l~~~~~~~g~~l~~~l~~l~~~~~ 343 (425)
T PRK09264 269 ISGYGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS-D---DAFEKEVKAKGELVRERLEEIAAKYP 343 (425)
T ss_pred cCCCccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh-h---hHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98339999999999886 3443322334566777777766666631000 1 1222333333333333332 233
Q ss_pred CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHH
Q 012124 379 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVER 456 (470)
Q Consensus 379 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~ 456 (470)
.+.......|+++|+.+++.. ....+++.+.++ ||.+.+...+ ...||++.. .+++++++++++
T Consensus 344 ~~~~~vrg~Gl~~~i~l~~~~-----------~~~~l~~~~~~~-Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~ 409 (425)
T PRK09264 344 GLGAEVRGRGMMQGIDFGDGE-----------LAGKIAAEAFEN-GLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDI 409 (425)
T ss_pred CceecceecccEEEEEecChH-----------HHHHHHHHHHHC-CCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHH
Confidence 232223345788899986431 356778777766 9999875433 367888866 489999999999
Q ss_pred HHHHHHhhC
Q 012124 457 IKKGLLTLR 465 (470)
Q Consensus 457 l~~~l~~~~ 465 (470)
|+++++++.
T Consensus 410 l~~~l~~~~ 418 (425)
T PRK09264 410 LEEAVAEVL 418 (425)
T ss_pred HHHHHHHHH
Confidence 999987754
No 232
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=5e-20 Score=185.08 Aligned_cols=351 Identities=14% Similarity=0.110 Sum_probs=218.1
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+..... ...-..+....+++.|.+..+ -..+.+++++++++|.+
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGseA~e 117 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGP-SGVIYYESILKLAEELAEITP--GGLDCFFFSNSGAEAIE 117 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHH
Confidence 5778999998853 3333 7889999999987522111 001123555666666665442 13468999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCC-------------EEEEecCcCCC--CCc--------cCHHhHhh
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISE--NFL--------LDPKVLES 222 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~--~~~--------~d~~~l~~ 222 (470)
.+++... .....|+..+-+|++....... .+. .+..+|..... ..+ -+++.+++
T Consensus 118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 197 (433)
T PRK08117 118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLES 197 (433)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHH
Confidence 9988632 1236788888888886643321 110 11222221100 000 14556666
Q ss_pred hcc-----CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEE
Q 012124 223 KLT-----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 296 (470)
Q Consensus 223 ~l~-----~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i 296 (470)
.++ +++.+|++...+...|.. .+.+.+++|.++|++| |+++|.||+|.+|...+.... ...+ +...-+
T Consensus 198 ~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~gr~G~~~~-~~~~----gv~pDi 271 (433)
T PRK08117 198 LFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH-GILLIFDEVQTGFGRTGEWFA-AQTF----GVVPDI 271 (433)
T ss_pred HHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhccCccccchh-Hhhc----CCCCCE
Confidence 553 245566665556666764 5899999999999999 999999999998655443211 1111 112235
Q ss_pred eccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 012124 297 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 376 (470)
Q Consensus 297 ~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 376 (470)
.||||.++ +|+++|++++++++++.+.......+++.+++.+.++.+.|+.-.. + .+.+.++++.+++.+.|++
T Consensus 272 ~t~sK~lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~-~----~l~~~~~~~g~~l~~~L~~ 345 (433)
T PRK08117 272 MTIAKGIA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE-E----KLLDNANEMGAYALERLEV 345 (433)
T ss_pred eehhhhcc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-c----cHHHHHHHHHHHHHHHHHH
Confidence 79999998 9999999999999988876545555677899999999998874211 1 2233333334444444433
Q ss_pred CC---CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHH
Q 012124 377 LE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQ 451 (470)
Q Consensus 377 ~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~ 451 (470)
+. ++....+..|+++++.+.+..+ .. .......+.+.+.++ ||.+.+... ..+.+|++++ .++++|+
T Consensus 346 l~~~~~~~~~vrg~Gl~~gi~~~~~~~-~~----~~~~~~~~~~~l~~~-Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~ 417 (433)
T PRK08117 346 LKEKHPVIGDVRGIGLMIGIEIVDPDG-EP----DGDAVEKILDKCLEK-GLLFYLCGN--AGNVLRMIPPLTVTKEEID 417 (433)
T ss_pred HHhcCCceeeeecCCcEEEEEEecCCC-Cc----chHHHHHHHHHHHHC-CCEEeecCC--CCCEEEEeCCccCCHHHHH
Confidence 20 2222234456767777743200 00 001235566666654 998876321 2468999964 4999999
Q ss_pred HHHHHHHHHHHhhC
Q 012124 452 AAVERIKKGLLTLR 465 (470)
Q Consensus 452 ~~l~~l~~~l~~~~ 465 (470)
+++++|.++++++.
T Consensus 418 ~~~~~l~~~l~~~~ 431 (433)
T PRK08117 418 EGLDILDEALTEYE 431 (433)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 233
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=7.6e-20 Score=180.75 Aligned_cols=211 Identities=14% Similarity=0.139 Sum_probs=152.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 208 (470)
..+|++.++++. |. . +.+++++| +.++.+++. ++++||+|++.+|.|++.. ..++..|++++.++.+
T Consensus 56 ~~~le~~lA~l~----g~--~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 126 (390)
T PRK08064 56 REALEDIIAELE----GG--T-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT 126 (390)
T ss_pred HHHHHHHHHHHh----CC--C-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence 456777777765 42 2 45555555 568887776 7789999999999998644 3455689999999862
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
|++.+++++++++++|++++|+||||.+.+ +++|.++|+++ ++++|+|++|...... .++ .
T Consensus 127 -------d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~~----~~~-~--- 187 (390)
T PRK08064 127 -------NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAI-GCLTFVDNTFLTPLLQ----KPL-D--- 187 (390)
T ss_pred -------CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHc-CCEEEEECCCCccccc----Cch-h---
Confidence 789999999999999999999999999998 78889999999 9999999998763221 111 1
Q ss_pred CCCceEEEeccCcccc-cccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~-~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
.+..+++.|++|.++ -+|...|++++ ++++++.+...+..++...++..... .+.. -+.+....++..++
T Consensus 188 -~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~g----l~tl~~R~~~~~~~ 259 (390)
T PRK08064 188 -LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL---VLRG----LKTLHVRLEHSSET 259 (390)
T ss_pred -hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH---HHcc----cCcHHHHHHHHHHH
Confidence 245689999999985 23445677665 56888988888776665555554443 2222 22344555555677
Q ss_pred HHHHHHHhccCCC
Q 012124 367 RDFLVKSFGELEG 379 (470)
Q Consensus 367 ~~~l~~~L~~~~g 379 (470)
...+.+.|++.|.
T Consensus 260 a~~la~~L~~~~~ 272 (390)
T PRK08064 260 ANKIALYLQEHPK 272 (390)
T ss_pred HHHHHHHHhcCCC
Confidence 7777777776544
No 234
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=8.6e-20 Score=183.40 Aligned_cols=351 Identities=14% Similarity=0.122 Sum_probs=219.4
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+. ..+.......+.+..+++.+....+.. ..+.+++++++++|.+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGseA~e 131 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARF-THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAEAVE 131 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHHHHH
Confidence 6788999998863 3333 789999999998763 223222334577778888887654321 1257889999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcCCCC----Ccc--------CHHhH
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISEN----FLL--------DPKVL 220 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~----~~~--------d~~~l 220 (470)
.+++... ...++|+..+.+|++........ +. .+..+|.....+ ... .++.+
T Consensus 132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (443)
T PRK06058 132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI 211 (443)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence 9988432 23378999999999987544321 11 122222211000 000 12334
Q ss_pred hhhcc-CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEec
Q 012124 221 ESKLT-EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 298 (470)
Q Consensus 221 ~~~l~-~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S 298 (470)
++.+. +++.+|++...+.-.|.. .+++.+++|.++|++| |+++|.||++..|...+... ....+.- ... +-+
T Consensus 212 ~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfgRtG~~f-a~~~~gv-~PD---iv~ 285 (443)
T PRK06058 212 EKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN-GVVFIADEVQTGFARTGAWF-ACEHEGI-VPD---LIT 285 (443)
T ss_pred HHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcChhhh-HHHhcCC-CCC---EEE
Confidence 44443 456666553334344554 5688999999999999 99999999999875443211 1111111 111 335
Q ss_pred cCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 012124 299 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 378 (470)
Q Consensus 299 ~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 378 (470)
++|.++ +|+++|++++++++++.+.......+++.+++++.++.+.|+.- ++ ..+.+..+++.+++.+.|+++.
T Consensus 286 ~gK~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~---~~--~~l~~~~~~~g~~l~~~L~~l~ 359 (443)
T PRK06058 286 TAKGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETI---EE--DDLVARARQIEALMTDRLRALA 359 (443)
T ss_pred Eccccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH---HH--cCHHHHHHHHHHHHHHHHHHHH
Confidence 689998 99999999999999888765555578889999999999998741 11 1344555555566666665431
Q ss_pred ---CC-eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHH
Q 012124 379 ---GV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQA 452 (470)
Q Consensus 379 ---g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~ 452 (470)
++ .-....+.| +.+.+...... .........+.+.++++ ||.+.|+..|+ +++|+... .+++++++
T Consensus 360 ~~~~~i~~vrg~G~~-~~i~~~~~~~~----~~~~~~~~~l~~~~~~~-Gv~~~~~~~~~--~~lr~~Ppl~~t~~~i~~ 431 (443)
T PRK06058 360 AEDDRIGDVRGRGAM-IAIELVKPGTT----EPDAELTKALAAAAHAA-GVIVLTCGTYG--NVIRLLPPLVIGDELLRE 431 (443)
T ss_pred hhCCcEEeeeccceE-EEEEEecCCCC----CCcHHHHHHHHHHHHHC-CeEEeccCCCC--CEEEEECCCccCHHHHHH
Confidence 22 112334444 45555321000 00000134566666655 99999875553 68999644 59999999
Q ss_pred HHHHHHHHHHhh
Q 012124 453 AVERIKKGLLTL 464 (470)
Q Consensus 453 ~l~~l~~~l~~~ 464 (470)
++++|+++++++
T Consensus 432 ~~~~l~~~l~~~ 443 (443)
T PRK06058 432 GLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 235
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.88 E-value=5.3e-20 Score=183.51 Aligned_cols=159 Identities=16% Similarity=0.208 Sum_probs=130.2
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEec
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILP 206 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 206 (470)
+-..+|++.++++. | .+..++++++++++..++.+++++||+|++.++.|++.. ..++..|++++.++
T Consensus 57 p~~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~ 128 (418)
T TIGR01326 57 PTTDVLEQRIAALE----G----GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD 128 (418)
T ss_pred hhHHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence 33567777777775 3 246788999999999999999999999999999997654 34567899999887
Q ss_pred CcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc
Q 012124 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 286 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~ 286 (470)
.+ |++.+++++++++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|+...+ ..+ +
T Consensus 129 ~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~-~i~livD~t~~~~~~----~~~---l 190 (418)
T TIGR01326 129 PD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAH-GVPLIVDNTFATPYL----CRP---I 190 (418)
T ss_pred CC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCchhhc----CCc---h
Confidence 42 889999999989999999999999999998 88999999999 999999999974211 111 1
Q ss_pred CCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 287 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 287 ~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
. .+.++++.||||.++.+|+|+||++++.
T Consensus 191 ~--~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 191 D--HGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred h--cCCeEEEECccccccCCccceEEEEEec
Confidence 1 3567999999999987899999999854
No 236
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.88 E-value=8e-20 Score=179.11 Aligned_cols=220 Identities=13% Similarity=0.160 Sum_probs=161.1
Q ss_pred CCCCCCcCc---HHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHH
Q 012124 125 TRYTPNAGT---LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARI 197 (470)
Q Consensus 125 ~~y~~~~g~---~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~ 197 (470)
..|+. .|. ..|++.++++. | .+++++++|+++|+..++.+++++||+|++++|.|++.... ++.
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~----g----~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~ 112 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE----G----GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKR 112 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh----C----CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHh
Confidence 45642 444 47888888775 2 36899999999999999999999999999999999877643 356
Q ss_pred cCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCC
Q 012124 198 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 277 (470)
Q Consensus 198 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~ 277 (470)
.|+++..++.. +.+.+++++++++|+|++++|+||+|...+ +++|+++|+++ |+++|+|++|+.....
T Consensus 113 ~gi~v~~~d~~-------~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~-g~~livD~t~a~g~~~- 180 (377)
T TIGR01324 113 MGVDITYYDPL-------IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNP-GIVIMIDNTWAAGLLF- 180 (377)
T ss_pred cCcEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCcccccc-
Confidence 78888776531 237899999999999999999999988776 99999999999 9999999999853221
Q ss_pred CCcccccccCCCCCceEEEeccCcccc-cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHH
Q 012124 278 ATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 356 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~ 356 (470)
.++ ..+..++++|++|.++ -++...|+++++++.++.+.........+.++.....+...++ .+
T Consensus 181 ---~pl-----~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~-------tl 245 (377)
T TIGR01324 181 ---KPL-----EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLR-------TL 245 (377)
T ss_pred ---Ccc-----ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh-------hH
Confidence 111 1355699999999995 2346789999998888877755555555566654433333332 33
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC
Q 012124 357 SKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 357 ~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
..+.++..++...+.+.|++.|.+
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 344555556666667777665443
No 237
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=9.1e-20 Score=181.54 Aligned_cols=155 Identities=19% Similarity=0.283 Sum_probs=126.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~ 208 (470)
...|.+.++++. | .+..++++|+++++..++..++++||+|+++++.|++... .++..|++++.++.
T Consensus 66 ~~~Le~~lA~le----g----~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~- 136 (431)
T PRK08248 66 TDVFEKRIAALE----G----GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP- 136 (431)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence 455666666664 3 3578889999999999999999999999999999987543 45678999999986
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.|++.+++++++++++|++++|+||||.+++ +++|+++|+++ +++||+|++|.. +....++
T Consensus 137 ------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~-gi~vIvD~t~a~----~~~~~pl----- 197 (431)
T PRK08248 137 ------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEH-GIPLIVDNTFAS----PYLLRPI----- 197 (431)
T ss_pred ------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEeCCCCc----cccCChh-----
Confidence 3889999999989999999999999999999 77899999999 999999999863 1111121
Q ss_pred CCCceEEEeccCcccccccceeeEEEc
Q 012124 289 MWERTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
..+..+++.|++|.+|.+|.++|++++
T Consensus 198 ~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 198 EHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred HcCCCEEEEcCccccCCCCCceEEEEE
Confidence 145669999999999889999998776
No 238
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.88 E-value=1.2e-19 Score=181.47 Aligned_cols=325 Identities=16% Similarity=0.135 Sum_probs=211.3
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcC----C-CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREG----F-TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~----~-~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
++++.|..+.-. +.|+.+.+++.+.+... . ..+....+...+.+.+.+ + +..| +++++|++|+|++++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~~v~~~~~~t~~l~ 100 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKEDEVVVMNTLTINLH 100 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCCcEEEeCCchHHHH
Confidence 456888866644 34778888887665431 1 111111122233333333 2 3455 57899999999999999
Q ss_pred HHHHHhcCCCC---eEEEcCCCCCChHH----HHHHcCCEE----EEecCcCCCCCccCHHhHhhhc---cCCceEEEEc
Q 012124 169 QAVLAVCSPGD---EVIIPAPFWVSYPE----MARIADATP----VILPTRISENFLLDPKVLESKL---TEKSRLLILC 234 (470)
Q Consensus 169 ~~~~~l~~~gd---~Vlv~~p~y~~~~~----~~~~~g~~~----~~v~~~~~~~~~~d~~~l~~~l---~~~~~~i~l~ 234 (470)
.++..++++++ .|++.+..|++... .++..|+++ +.++.+ .++.+|++.+++.+ ++++++|+++
T Consensus 101 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 101 LLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred HHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHHHHHHHHhcCCCeEEEEEe
Confidence 99998876653 68888899988443 345678887 455553 33457889988877 4689999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccc-cccceeeEE
Q 012124 235 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYI 313 (470)
Q Consensus 235 ~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~-~~G~r~G~~ 313 (470)
+++|.||..++ +++|.++|+++ |+++++|++++. +..+..+.. .+-.+++.|..|.++ -|| .|.+
T Consensus 179 ~v~~~tG~~~~---~~~i~~~~~~~-g~~~~vD~aq~~----G~~~id~~~----~gvD~~~~s~hK~l~g~pG--~~l~ 244 (406)
T TIGR01814 179 GVQYYTGQLFD---MAAITRAAHAK-GALVGFDLAHAV----GNVPLDLHD----WGVDFACWCTYKYLNAGPG--AGAF 244 (406)
T ss_pred ccccccceecC---HHHHHHHHHHc-CCEEEEEccccc----CCccccccc----CCCCEEEEcCccccCCCCC--eEEE
Confidence 99999999999 88999999999 999999999986 222222222 345699999999873 244 3333
Q ss_pred EcCHHHHHHHHHH-h----------------------hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 012124 314 AGPKHFVAACNKI-Q----------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 370 (470)
Q Consensus 314 ~~~~~~~~~l~~~-~----------------------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 370 (470)
+.++. ...+... . .....+++.....++.++|+.-. +...++++++.+...+++
T Consensus 245 v~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~l 321 (406)
T TIGR01814 245 VHEKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFD--QAGMEALRKKSLLLTDYL 321 (406)
T ss_pred Eehhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHH
Confidence 33332 2222110 0 00012245555555555665310 223567777778888888
Q ss_pred HHHhccC----CCCeecCCC-----ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012124 371 VKSFGEL----EGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 441 (470)
Q Consensus 371 ~~~L~~~----~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRl 441 (470)
.+.|+++ +|+++..|. +++ +.+.+| . +..++.+.|.++ ||.+.. ..++.+|+
T Consensus 322 ~~~l~~~~~~~~~~~i~~~~~~~~r~~~-v~~~~~-~------------~~~~~~~~L~~~-gi~v~~----~~~~~iRi 382 (406)
T TIGR01814 322 EELIKARCGGPPVLTIITPRDHAQRGCQ-LSLTHP-V------------PGKAVFQALIKR-GVIGDK----REPSVIRV 382 (406)
T ss_pred HHHHHhhcCCCCceEEeCCCChhhcCCe-EEEEec-C------------CHHHHHHHHHHC-CEEEec----cCCCeEEE
Confidence 8888764 357666542 234 455665 2 567888888665 898753 22468999
Q ss_pred Eee--c-CHHHHHHHHHHHHHHH
Q 012124 442 SYA--A-SLTTLQAAVERIKKGL 461 (470)
Q Consensus 442 s~~--~-~~~~i~~~l~~l~~~l 461 (470)
|++ . ++++++.+++.|++++
T Consensus 383 S~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 383 APVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred echhccCCHHHHHHHHHHHHHHh
Confidence 984 3 8999999999998765
No 239
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=2.3e-19 Score=175.41 Aligned_cols=219 Identities=12% Similarity=0.161 Sum_probs=157.4
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEec
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILP 206 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 206 (470)
.+..+.++.+++.+....+ .++. ++++++++|+..++.++++|||+|++++|.|+++.. .++..|.++..++
T Consensus 60 R~gnPt~~~Le~~la~le~---~~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEG---SAGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred CCCChHHHHHHHHHHHHhC---CCCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 4556777777777765333 3344 555557899999999999999999999999999875 4577899988886
Q ss_pred CcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc
Q 012124 207 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 286 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~ 286 (470)
.. +.+.+++++++++|+|++++|+||++...+ +++|+++|+++ |+++|+|++|....+. .+ +
T Consensus 136 ~~-------~~e~l~~al~~~TklV~lesPsNP~l~v~d---l~~I~~la~~~-g~~vvVD~t~a~p~~~----~p---l 197 (395)
T PRK05967 136 PE-------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQD---IPAIAEAAHRH-GAIVMMDNTWATPLYF----RP---L 197 (395)
T ss_pred CC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHHh-CCEEEEECCccCceec----Ch---h
Confidence 42 457899999999999999999999765554 99999999999 9999999999753211 11 1
Q ss_pred CCCCCceEEEeccCcccc-cccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012124 287 PGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 365 (470)
Q Consensus 287 ~~~~~~~i~i~S~sK~~~-~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 365 (470)
. .+..|++.|.+|.++ -.+.-.|+++..+++.+.+.........+.+++....+..-+ +-+.-+.++..+
T Consensus 198 ~--~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl-------~Tl~lR~~~~~~ 268 (395)
T PRK05967 198 D--FGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGL-------RTMGIRLEHHRK 268 (395)
T ss_pred H--cCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCc-------ccHHHHHHHHHH
Confidence 1 355699999999873 235667988888877777765555566666776533322222 223334444456
Q ss_pred HHHHHHHHhccCCCC
Q 012124 366 RRDFLVKSFGELEGV 380 (470)
Q Consensus 366 ~~~~l~~~L~~~~g~ 380 (470)
+...+.+.|++.|.+
T Consensus 269 na~~lA~~L~~hp~v 283 (395)
T PRK05967 269 SALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHhCCCC
Confidence 666677777776554
No 240
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.87 E-value=3.7e-21 Score=174.33 Aligned_cols=365 Identities=15% Similarity=0.153 Sum_probs=257.8
Q ss_pred cccccCCchHHHHHHHHHHHHhcCCCeEEccCCCCC----CCC-hHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHH
Q 012124 70 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD----FDT-PVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHK 143 (470)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~-~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~ 143 (470)
.+...++.++..+.+.... ..++..|+|+.|.-- -+. -+.+++|-.+.... -.-.|.|..|.+++.+..+++
T Consensus 30 ~V~maPpDpILGVTeAfk~--D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakL 107 (427)
T KOG1411|consen 30 HVEMAPPDPILGVTEAFKK--DPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKL 107 (427)
T ss_pred cCCCCCCCCcccHHHHHhc--CCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHH
Confidence 3445556666555443322 234467899998621 111 35666665555442 356799999999999999998
Q ss_pred HHHHcCCCCCCCcEEE--ecChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHh
Q 012124 144 LKEENGLSYTPDQILV--SNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 219 (470)
Q Consensus 144 l~~~~g~~~~~~~i~i--t~g~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 219 (470)
+-......+..++|+. |-+++.++......+ .-++..|.+++|+|.++.+++..+|+.+..+........++|.+.
T Consensus 108 a~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g 187 (427)
T KOG1411|consen 108 ALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKG 187 (427)
T ss_pred hhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHH
Confidence 8421111133445543 345666666554443 347899999999999999999999999988888766677799998
Q ss_pred HhhhccCC--ceEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC--CcccccccCCCCCceE
Q 012124 220 LESKLTEK--SRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTL 294 (470)
Q Consensus 220 l~~~l~~~--~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~--~~~~~~~~~~~~~~~i 294 (470)
+.+.+.+. ...|++ ...|||||+..+.|+|++|.++.++. +.+-+.|-+|+.|.-+.- +...+.-+..+...++
T Consensus 188 ~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~ 266 (427)
T KOG1411|consen 188 MLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEIL 266 (427)
T ss_pred HHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCchhhHHHHHHHHHcCCceE
Confidence 77777542 223334 44599999999999999999999999 999999999999765432 2223334444467899
Q ss_pred EEeccCcccccccceeeEEE--c-CHH----HHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHH---HHHHHHHHH
Q 012124 295 TVNGFSKAFAMTGWRLGYIA--G-PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKAFR 364 (470)
Q Consensus 295 ~i~S~sK~~~~~G~r~G~~~--~-~~~----~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~---~~~~~~~~~ 364 (470)
+..||+|.+|+.|-|+|.+. + +++ +...++.+.+....++|..+..++...|.+..+...| ++-+.+++.
T Consensus 267 laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~ 346 (427)
T KOG1411|consen 267 LAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRII 346 (427)
T ss_pred eehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999853 3 333 4445667778888889999999999999876554566 455677888
Q ss_pred HHHHHHHHHhccC--C-CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012124 365 ERRDFLVKSFGEL--E-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 441 (470)
Q Consensus 365 ~~~~~l~~~L~~~--~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRl 441 (470)
..|+.|.+.|++. + .|..+..+-|||.+-.+. .+.++.|.+++.|+++-- =|+
T Consensus 347 ~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~----------------peQv~~l~ke~~iYmT~d--------GRi 402 (427)
T KOG1411|consen 347 SMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLN----------------PEQVDWLTKEYHIYLTKD--------GRI 402 (427)
T ss_pred hhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCC----------------HHHHHHHHhhheeeeccC--------ceE
Confidence 8899999999874 2 255566788998875552 244567888888887642 289
Q ss_pred Eeec-CHHHHHHHHHHHHHHH
Q 012124 442 SYAA-SLTTLQAAVERIKKGL 461 (470)
Q Consensus 442 s~~~-~~~~i~~~l~~l~~~l 461 (470)
|.+. +...++...+.|.++-
T Consensus 403 S~aG~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 403 SMAGLSSSNVPYLADAIHAVT 423 (427)
T ss_pred eeccccccCCcccchhhHhHh
Confidence 9987 6566666666665543
No 241
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=1.9e-19 Score=179.46 Aligned_cols=223 Identities=14% Similarity=0.164 Sum_probs=160.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcC
Q 012124 124 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIAD 199 (470)
Q Consensus 124 ~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g 199 (470)
...|+.. |.+ .++++.+++.+..| .+++++++++++++.+++ .++++||+|++++|.|+++.. .+...|
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G 196 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSG 196 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCC
Confidence 4567544 654 68888888887544 456777788888987665 578999999999999998764 345689
Q ss_pred CEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCC
Q 012124 200 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 279 (470)
Q Consensus 200 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~ 279 (470)
++++.++. .|++.+++++++++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|......
T Consensus 197 ~~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~-g~~lIVD~A~a~~~~~--- 262 (464)
T PLN02509 197 VVVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQ-GALVLVDNSIMSPVLS--- 262 (464)
T ss_pred eEEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHc-CCEEEEECCccccccC---
Confidence 99888864 3789999999999999999999999999755 99999999999 9999999998643221
Q ss_pred cccccccCCCCCceEEEeccCccccccc-ceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHH
Q 012124 280 HTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 357 (470)
Q Consensus 280 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 357 (470)
.++ . .+..+++.|++|.++-+| .=.|++++ ++.+.+.+...+.......+++....+...| +.+.
T Consensus 263 -~pl---~--~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-------~tL~ 329 (464)
T PLN02509 263 -RPL---E--LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI-------KTMA 329 (464)
T ss_pred -Chh---h--cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhh-------hhHH
Confidence 111 1 244599999999985333 23577775 4445555554444333334555433333322 3455
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 012124 358 KMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 358 ~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
.+.++..++.+.+.+.|++.|.+
T Consensus 330 ~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 330 LRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCc
Confidence 66677777888888888887665
No 242
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=3.1e-19 Score=176.39 Aligned_cols=216 Identities=14% Similarity=0.197 Sum_probs=159.4
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecC
Q 012124 132 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPT 207 (470)
Q Consensus 132 g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~ 207 (470)
-..+|.+.++++. | .+..+++++++.|+.+++.+++++||+|+++.++|.+.... +...|+++..+..
T Consensus 62 tv~~lE~~la~le----g----~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAELE----G----GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 3456777777764 2 24688999999999999999999999999999999877765 6778999988864
Q ss_pred cCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC
Q 012124 208 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 287 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~ 287 (470)
. +|++.+++++++++|+|++.+|+||++.+++ +++|+++|+++ |+++|+|++|.. +.+....
T Consensus 134 ~------~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~-gi~livD~T~~t--------P~~~~pl 195 (432)
T PRK06702 134 N------LTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKEL-EVPFIVDNTLAT--------PYLCQAF 195 (432)
T ss_pred C------CCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHc-CCEEEEECCCCc--------hhhCChh
Confidence 2 6899999999999999999999999999999 99999999999 999999999852 2222211
Q ss_pred CCCCceEEEeccCc-----cccccccee-----eEEEcCH-HHH---------------------H-HHHHHhhhccCCC
Q 012124 288 GMWERTLTVNGFSK-----AFAMTGWRL-----GYIAGPK-HFV---------------------A-ACNKIQSQFTSGA 334 (470)
Q Consensus 288 ~~~~~~i~i~S~sK-----~~~~~G~r~-----G~~~~~~-~~~---------------------~-~l~~~~~~~~~~~ 334 (470)
..+-.|++.|+|| ...++|.++ +|...+. +++ . ........+..+.
T Consensus 196 -~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (432)
T PRK06702 196 -EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCM 274 (432)
T ss_pred -hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCC
Confidence 1355699999999 666777776 5654421 111 1 1112333445678
Q ss_pred ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCe
Q 012124 335 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 381 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 381 (470)
+++....+...|+. +..+.++..++...+.+.|++.|.+.
T Consensus 275 sp~~a~l~~rgL~T-------l~lR~~r~~~Na~~la~~L~~~p~V~ 314 (432)
T PRK06702 275 SPFNAYISNIGLET-------LHLRMERHSENALAVAKWLADHERIE 314 (432)
T ss_pred CHHHHHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 88877666666653 33344444577778888888776553
No 243
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=3.3e-19 Score=177.38 Aligned_cols=157 Identities=16% Similarity=0.217 Sum_probs=124.1
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecC
Q 012124 132 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPT 207 (470)
Q Consensus 132 g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~ 207 (470)
-..+|++.|+++. | .+..++++++++++..++.+++++||+|+++.+.|.+....+.. .|.++..++.
T Consensus 59 t~~~Le~~lA~l~----g----~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 59 TNDVLEQRVAALE----G----GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred hHHHHHHHHHHHh----C----CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 3456777777764 3 23567788888999999999999999999999999976655433 4666665553
Q ss_pred cCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC
Q 012124 208 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 287 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~ 287 (470)
.|++.+++++++++++|++++|+||||.+++ +++|.++|+++ +++||+|++|+..... .++ .
T Consensus 131 -------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-~i~vVvD~a~a~~~~~----~p~-~-- 192 (425)
T PRK06084 131 -------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRH-GVPLIVDNTVATPVLC----RPF-E-- 192 (425)
T ss_pred -------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccccC----Chh-h--
Confidence 4899999999989999999999999999999 78999999999 9999999999742211 111 1
Q ss_pred CCCCceEEEeccCcccccccceeeEEEcC
Q 012124 288 GMWERTLTVNGFSKAFAMTGWRLGYIAGP 316 (470)
Q Consensus 288 ~~~~~~i~i~S~sK~~~~~G~r~G~~~~~ 316 (470)
.+..+++.|++|.++.+|.++|.+++.
T Consensus 193 --~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 193 --HGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred --cCCCEEEECchhcccccccceeEEEEe
Confidence 245599999999998788998887763
No 244
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.86 E-value=3.4e-19 Score=178.55 Aligned_cols=346 Identities=15% Similarity=0.075 Sum_probs=215.8
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. +|.+.+++.+++.+..... ...-..+.+..+++.+.+..+. ..+++++++++++|.+
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e 116 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVI-FAGFTHEPAERLAQRLVALTPG--GLDHVFFSDSGSVAVE 116 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHH
Confidence 5778899998853 3333 7899999999987632111 0011235566677777654321 2368999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCcCCCCCccCHHhHhhhcc--
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLT-- 225 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~~~l~-- 225 (470)
.+++.... +| .+|+...-+|++....+..... .+..++....+....+++.+++.+.
T Consensus 117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~ 196 (423)
T PRK05964 117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH 196 (423)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC
Confidence 99886421 33 5788889999986644332111 1222332211101122778888774
Q ss_pred -CCceEEEEcC-CCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcc
Q 012124 226 -EKSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 226 -~~~~~i~l~~-p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
+++.+|++.. .+..+|..+ +.+.+++|.++|++| |+++|.||++.++...+.. ...... +...-+.+++|.
T Consensus 197 ~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~-~a~~~~----~v~pDi~~~~K~ 270 (423)
T PRK05964 197 AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH-GVLLIFDEIATGFGRTGTL-FACEQA----GVSPDIMCLSKG 270 (423)
T ss_pred CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcch-hHHHhc----CCCCCeeeeehh
Confidence 3556666644 477788755 899999999999999 9999999999876443321 111111 111224578999
Q ss_pred ccccc-ceeeEEEcCHHHHHHHHHH------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012124 303 FAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 375 (470)
Q Consensus 303 ~~~~G-~r~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 375 (470)
++ .| +++|++++++++.+.+... ....+++.+++...++.+.++.-. .++++++..+..+..++.+.+ +.
T Consensus 271 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~-~~~~~~~~~~~g~~l~~~l~~-l~ 347 (423)
T PRK05964 271 LT-GGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE-DEPVLERVAALSAGLAEGLEP-FR 347 (423)
T ss_pred hh-cCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHh-hc
Confidence 97 56 8999999999999887531 122345678888888888776311 123344444333333333332 22
Q ss_pred cCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHH
Q 012124 376 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAA 453 (470)
Q Consensus 376 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~ 453 (470)
+.+.+.-.. .-|+.+.+.+.+... ......+.+.|.++ ||.+.+. .+.+|++.. .++++|+++
T Consensus 348 ~~~~i~~vr-g~Gl~~~i~l~~~~~--------~~~~~~l~~~l~~~-Gv~v~~~-----~~~lR~~p~l~~t~edId~~ 412 (423)
T PRK05964 348 DLPGVADVR-VLGAIGAVELDRPVL--------ERDGPALRAFALER-GVLLRPL-----GNTIYLMPPYIITAEELDRI 412 (423)
T ss_pred cCCCeEEee-cccEEEEEEeccCcc--------hhHHHHHHHHHHHC-CeEEEec-----CCEEEEeCCcccCHHHHHHH
Confidence 233332122 234545666653200 00245777777765 9998873 257999977 499999999
Q ss_pred HHHHHHHHHhh
Q 012124 454 VERIKKGLLTL 464 (470)
Q Consensus 454 l~~l~~~l~~~ 464 (470)
+++|+++++++
T Consensus 413 v~~l~~al~~~ 423 (423)
T PRK05964 413 TDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHhhC
Confidence 99999998764
No 245
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.1e-18 Score=171.58 Aligned_cols=213 Identities=12% Similarity=0.137 Sum_probs=153.1
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecC
Q 012124 132 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPT 207 (470)
Q Consensus 132 g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~ 207 (470)
-..+|++.++++. |. ++.+++.+| +.++..++ .+++|||+|++++|+|++... .+...|++++.++.
T Consensus 51 ~~~~Le~~lA~l~----g~---~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 51 TRAALEELIAVLE----GG---HAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHHh----CC---CceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 3567777777765 32 234555555 56787665 577999999999999985543 34457999988874
Q ss_pred cCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC
Q 012124 208 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 287 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~ 287 (470)
.|++.+++++++++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|....+.. ++ .
T Consensus 122 -------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~-g~~lvvD~a~~~~~~~~----p~-~-- 183 (377)
T PRK07671 122 -------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEK-GLLTIVDNTFMTPYWQS----PI-S-- 183 (377)
T ss_pred -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCCccccCC----hh-h--
Confidence 3889999999999999999999999999988 88889999999 99999999997533321 11 1
Q ss_pred CCCCceEEEeccCccccccc-ceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012124 288 GMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 365 (470)
Q Consensus 288 ~~~~~~i~i~S~sK~~~~~G-~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 365 (470)
.+..+++.|+||.++-++ .-.|++++ ++++++.+...+.......++.....+..- .+.+....++..+
T Consensus 184 --~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~-------l~tl~~R~~~~~~ 254 (377)
T PRK07671 184 --LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRG-------LKTLGIRMEEHET 254 (377)
T ss_pred --hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcC-------cChHHHHHHHHHH
Confidence 234599999999996332 33566665 567888888777766555666544333222 2234556666677
Q ss_pred HHHHHHHHhccCCCC
Q 012124 366 RRDFLVKSFGELEGV 380 (470)
Q Consensus 366 ~~~~l~~~L~~~~g~ 380 (470)
+...+.+.|++.|++
T Consensus 255 na~~la~~L~~~~~v 269 (377)
T PRK07671 255 NSRAIAEFLNNHPAV 269 (377)
T ss_pred HHHHHHHHHHcCCCe
Confidence 888888888877654
No 246
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.85 E-value=5.7e-18 Score=169.24 Aligned_cols=321 Identities=15% Similarity=0.171 Sum_probs=202.9
Q ss_pred EEccCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHH
Q 012124 97 IRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 171 (470)
Q Consensus 97 i~l~~g~~~~~~-----~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~ 171 (470)
..|+.|.|+.+. +..-++++.+.+......+++ -..+|++++++++. .+++++++|+++++.+++
T Consensus 26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL 95 (438)
T PRK15407 26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLAF 95 (438)
T ss_pred ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHH
Confidence 447888887654 233344555555444443432 35789999999863 247999999999999888
Q ss_pred HHh---------cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCccc
Q 012124 172 LAV---------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGS 242 (470)
Q Consensus 172 ~~l---------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~ 242 (470)
.++ ++|||+|+++.|+|+.+...+...|++++.++++. ..+.+|++.+++.+++++++|+++++ +|.
T Consensus 96 ~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G~ 171 (438)
T PRK15407 96 SALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LGN 171 (438)
T ss_pred HHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CCC
Confidence 875 47999999999999999999999999999999874 35679999999999989999988664 444
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeccccccc-cCCCCcccccccCCCCCceEEEeccC--cccccccceeeEEEcCH-H
Q 012124 243 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPK-H 318 (470)
Q Consensus 243 ~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~s--K~~~~~G~r~G~~~~~~-~ 318 (470)
..+ +++|.++|+++ |++||+|++++... +.+. .+.++. .+.+.||. |.+. .|- -|+++.++ +
T Consensus 172 p~d---l~~I~~la~~~-gi~vIeDaa~a~G~~~~g~---~~G~~g-----d~~~fSf~~~k~~~-~ge-GG~l~t~d~~ 237 (438)
T PRK15407 172 PFD---LAAVKAFCDKH-NLWLIEDNCDALGSTYDGR---MTGTFG-----DIATLSFYPAHHIT-MGE-GGAVFTNDPL 237 (438)
T ss_pred hhh---HHHHHHHHHHC-CCEEEEECccchhhhcCCe---eeeccC-----ceEEEeCCCCCCcc-ccC-ceEEEECCHH
Confidence 444 88999999999 99999999998633 2221 122221 24566664 6674 443 48888754 4
Q ss_pred HHHHHHHHhhhc---------------------------------------cCCCChHHHHHHHHHHhcCCCChHHHHHH
Q 012124 319 FVAACNKIQSQF---------------------------------------TSGASSISQKAGVAALGLGYAGGEVVSKM 359 (470)
Q Consensus 319 ~~~~l~~~~~~~---------------------------------------~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 359 (470)
+.+.+...+... ++..+.+....+..-| +.+++.
T Consensus 238 l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL-------~~l~~~ 310 (438)
T PRK15407 238 LKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQL-------EKLPGF 310 (438)
T ss_pred HHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHH-------HHHHHH
Confidence 555554443211 0111222222222222 233444
Q ss_pred HHHHHHHHHHHHHHhccCCC-Ceec-CCC---ceEEE-eeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC-
Q 012124 360 VKAFRERRDFLVKSFGELEG-VKMS-EPQ---GAFYL-FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA- 432 (470)
Q Consensus 360 ~~~~~~~~~~l~~~L~~~~g-~~~~-~~~---~g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~- 432 (470)
.+.-++..+++.+.|.++++ +.+. .+. ..+|. .+.+++.. ..+-+++.+.|.++ ||.+.+...
T Consensus 311 ~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~Rd~l~~~L~~~-GI~~~~~~~~ 380 (438)
T PRK15407 311 IEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA---------GFTRVELVKYLEEN-KIGTRLLFAG 380 (438)
T ss_pred HHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC---------CCCHHHHHHHHHHC-CCCccccCCC
Confidence 44555566666777776654 3221 111 22322 23443210 01467888888766 887653221
Q ss_pred -------CC------C---C-------CcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 433 -------FG------D---D-------TCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 433 -------f~------~---~-------~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
|. . + ..+-|-+.. ++++++..++.|+++++
T Consensus 381 ~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 381 NLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred ccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 10 0 0 124444433 78999999999998875
No 247
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.2e-18 Score=164.43 Aligned_cols=325 Identities=19% Similarity=0.222 Sum_probs=242.1
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 187 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~ 187 (470)
.++.+++++.+. ..+. -++...++-+.+.+.++..++.. +.+-++++.+++.+++.++..+++|||+|++..-+
T Consensus 16 v~~~V~~am~~~----~~~h-~s~~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG 89 (383)
T COG0075 16 VPPRVLLAMARP----MVGH-RSPDFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNG 89 (383)
T ss_pred CCHHHHHHhcCC----CCCC-CCHHHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCC
Confidence 367777766553 2221 22344566666666666666642 23567778999999999999999999999999888
Q ss_pred CCChH--HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC--CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEE
Q 012124 188 WVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 263 (470)
Q Consensus 188 y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~ 263 (470)
..+.+ ++++.+|++++.+... .+..+|++++++++++ +.+++.+++.-.+||+..| +++|+++|++| |.+
T Consensus 90 ~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~-g~l 163 (383)
T COG0075 90 KFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEH-GAL 163 (383)
T ss_pred hHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHc-CCE
Confidence 87754 7899999999999886 4456899999999974 5677878777789999999 99999999999 999
Q ss_pred EEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc-ccceeeEEEcCHHHHHHHHHHh---------------
Q 012124 264 VLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKIQ--------------- 327 (470)
Q Consensus 264 iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~-~G~r~G~~~~~~~~~~~l~~~~--------------- 327 (470)
+|+|.+-+. ++ .... .+. ++-.+++++--|.++. || +|++..+++..+.+....
T Consensus 164 ~iVDaVsS~---Gg-~~~~---vd~-wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~ 233 (383)
T COG0075 164 LIVDAVSSL---GG-EPLK---VDE-WGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYM 233 (383)
T ss_pred EEEEecccC---CC-cccc---hhh-cCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHH
Confidence 999998763 22 1111 232 5667888889999963 45 789998887666553211
Q ss_pred ---hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC---ceEEEeeeccCccCC
Q 012124 328 ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGS 401 (470)
Q Consensus 328 ---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~~~~~~~~ 401 (470)
..+.+.++....+++..+|+.- .++.++.+.+++++..+.+++.++.+ |++..... +.....+..|+.+
T Consensus 234 ~~~~~~p~Tppv~~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~-- 308 (383)
T COG0075 234 EKKGSTPYTPPVNLIYALREALDLI--LEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGV-- 308 (383)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCC--
Confidence 2344556666677777777752 25668999999999999999999998 88766521 2233456777764
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCCC
Q 012124 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPGV 468 (470)
Q Consensus 402 ~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~~~~ 468 (470)
+..++...+++++||.+.+|..-.....+||+... ..+++..++..|+.+++++....
T Consensus 309 ---------~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~ 368 (383)
T COG0075 309 ---------DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKV 368 (383)
T ss_pred ---------CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 44455557888889999988765566799999887 88999999999999999876543
No 248
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.85 E-value=7.4e-19 Score=167.69 Aligned_cols=347 Identities=16% Similarity=0.179 Sum_probs=229.2
Q ss_pred cCCCeEEccCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..+.-+.-. +|.+.+++.+++.++...-.|+ ++.-.+|+.+.++.+ ..|.|-+++++++|..
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pt----e~Ei~~Aell~~~~p---~~e~vrfvnSGTEAtm 123 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPT----ELEVELAELLIERVP---SIEKVRFVNSGTEATM 123 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHhcC---cccEEEEecchhHHHH
Confidence 67789999998754332 7889999999998875433343 444555555554433 4589999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cC--C-----------------EEEEecCcCCCCCccCHHhHhhhccC
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD--A-----------------TPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g--~-----------------~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
.+++... -..|.|+..+-||+++.+.+.. .| . .++.+|. -|++.+++++++
T Consensus 124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~~~~~ 196 (432)
T COG0001 124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEEAFEE 196 (432)
T ss_pred HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHHHHHH
Confidence 8888642 2348999999999998875432 22 1 2233333 189999998854
Q ss_pred ---CceEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcc
Q 012124 227 ---KSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 227 ---~~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
++.+|++ +...|..=+...++.++.|.++|++| |+++|.||+...|+..-.....+..+.++ +.+|.|.
T Consensus 197 ~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~-G~lLI~DEViTGFR~~~gGaq~~~gi~PD------lttlGKi 269 (432)
T COG0001 197 YGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH-GALLIFDEVITGFRVALGGAQGYYGVEPD------LTTLGKI 269 (432)
T ss_pred cCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchhhcccCCcccccccCcCcc------hhhhhhh
Confidence 5666666 44577554577788999999999999 99999999999887664444555556554 7889999
Q ss_pred cccccceeeEEEcCHHHHHHHHH---HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 012124 303 FAMTGWRLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 379 (470)
Q Consensus 303 ~~~~G~r~G~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 379 (470)
+| .|+++|.+.+++++++.+.. +....+++.+++...|..+.|+.-...+...+++.+.-.+.++-+.+.+.+. |
T Consensus 270 IG-GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g 347 (432)
T COG0001 270 IG-GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-G 347 (432)
T ss_pred hc-CCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 99 99999999999999997753 3445577889999888888887421101123333333333333333344333 5
Q ss_pred Ceec--CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHH
Q 012124 380 VKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERI 457 (470)
Q Consensus 380 ~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l 457 (470)
+.+. ...+.|-+++.-.+...-+.......+....+...|+++ ||.+.|.. | ...=+|.++++++|+..++.+
T Consensus 348 ~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~-~---ea~flS~ahte~di~~~~~a~ 422 (432)
T COG0001 348 IPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQ-F---EAGFLSTAHTEEDIDRTLEAA 422 (432)
T ss_pred CCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcc-c---cceeeecccCHHHHHHHHHHH
Confidence 5443 323333333332111000000000011123555677776 99998864 1 234588888999999999999
Q ss_pred HHHHHhhCC
Q 012124 458 KKGLLTLRP 466 (470)
Q Consensus 458 ~~~l~~~~~ 466 (470)
.++++++..
T Consensus 423 ~~~~~~~~~ 431 (432)
T COG0001 423 DEAFKELAG 431 (432)
T ss_pred HHHHHHhhc
Confidence 999887653
No 249
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.85 E-value=1.1e-18 Score=171.59 Aligned_cols=212 Identities=14% Similarity=0.151 Sum_probs=145.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~ 208 (470)
...|++.++++. | .+..+++ ++++.++.+++ .+++|||+|++++|.|++... .+...|++++.++.
T Consensus 52 ~~~Le~~la~l~----g---~~~al~~-~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~- 121 (380)
T PRK06176 52 RFALEELIADLE----G---GVKGFAF-ASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT- 121 (380)
T ss_pred HHHHHHHHHHHh----C---CCCEEEE-CCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-
Confidence 566777777764 3 2234555 55556888666 567999999999999986653 34567888887764
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.|++.+++++++++++|++.+|+||||.+++ +++|+++|+++ +++||+|++|+...+. .++ .
T Consensus 122 ------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~-gi~vivD~t~a~~~~~----~p~-~--- 183 (380)
T PRK06176 122 ------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDH-GLLTIVDNTFATPYYQ----NPL-L--- 183 (380)
T ss_pred ------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHc-CCEEEEECCccccccC----Ccc-c---
Confidence 3899999999999999999999999999998 88899999999 9999999999864322 111 1
Q ss_pred CCCceEEEeccCccccccc-ceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G-~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
.+..+++.|++|.++.+| .-.|+++. ++++.+++...+.....+.++.....+..-++ .+..+.++..++
T Consensus 184 -~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~-------tl~~R~~~~~~~ 255 (380)
T PRK06176 184 -LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK-------TLGLRMEAHQKN 255 (380)
T ss_pred -cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC-------cHHHHHHHHHHH
Confidence 244589999999996444 34677776 45677777766665444445554333222221 122233333445
Q ss_pred HHHHHHHhccCCCC
Q 012124 367 RDFLVKSFGELEGV 380 (470)
Q Consensus 367 ~~~l~~~L~~~~g~ 380 (470)
...+.+.|++.|.+
T Consensus 256 a~~la~~L~~~p~v 269 (380)
T PRK06176 256 ALCVAEFLEKHPKV 269 (380)
T ss_pred HHHHHHHHHhCCCe
Confidence 55566666655443
No 250
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=4.4e-20 Score=176.10 Aligned_cols=168 Identities=22% Similarity=0.321 Sum_probs=131.7
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCc
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 208 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 208 (470)
|..-+.++++.+++++ | ..+-+++++|+++++..++.++++|||+|+++.++|.+....+...|++++.++.+
T Consensus 57 ~~g~i~~~~~~~A~~~----g---a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~ 129 (294)
T cd00615 57 PTGPIKEAQELAARAF----G---AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE 129 (294)
T ss_pred CChHHHHHHHHHHHHh----C---CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence 3334567778888775 3 22345569999999999999999999999999999999999999999999999876
Q ss_pred CCCC----CccCHHhHhhhcc--CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc-cccCCCCcc
Q 012124 209 ISEN----FLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHT 281 (470)
Q Consensus 209 ~~~~----~~~d~~~l~~~l~--~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~-~~~~~~~~~ 281 (470)
.+.+ ..+|++.++++++ ++++++++++| ||||.+++ +++|+++|+++ |++||+|++|+. +.|.+....
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~-g~~livDeA~~~~~~~~~~~~~ 204 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHR-GLPVLVDEAHGAHFRFHPILPS 204 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhc-CCeEEEECcchhhhccCcccCc
Confidence 5443 3689999999995 46889999988 78999998 88999999999 999999999974 334322111
Q ss_pred cccccCCCCCceEEEeccCcccccccceeeEEE
Q 012124 282 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 314 (470)
Q Consensus 282 ~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~ 314 (470)
. .. ..+.++++.|++|++ +|++.|+++
T Consensus 205 ~--~~--~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 205 S--AA--MAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred c--hh--hcCCcEEEEchhccc--chHhHHHHH
Confidence 1 11 136789999999986 677765544
No 251
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=9.5e-19 Score=172.74 Aligned_cols=157 Identities=18% Similarity=0.200 Sum_probs=125.8
Q ss_pred CcH---HHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEe
Q 012124 132 GTL---ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVIL 205 (470)
Q Consensus 132 g~~---~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v 205 (470)
|.+ .|.+.++++. | .+..+++++++.|+..++.++++|||+|++.++.|+++.. .++..|++++.+
T Consensus 45 g~p~~~~lE~~la~le----g----~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v 116 (397)
T PRK05939 45 GTPTTAALEAKITKME----G----GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV 116 (397)
T ss_pred CCHHHHHHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE
Confidence 555 7777777764 3 2334555556899999999999999999999999987543 456789999988
Q ss_pred cCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 206 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 206 ~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
+. .|++.+++++++++++|++++|+||||.+.+ +++|+++|+++ |++||+|++|.... .+..
T Consensus 117 ~~-------~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~t~a~~~-------~~~~ 178 (397)
T PRK05939 117 DA-------TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRER-GLLYVVDNTMTSPW-------LFRP 178 (397)
T ss_pred CC-------CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHc-CCEEEEECCccccc-------ccCc
Confidence 86 3889999999999999999999999999866 99999999999 99999999986311 1111
Q ss_pred cCCCCCceEEEeccCcccccccceeeEEEcC
Q 012124 286 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 316 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~ 316 (470)
. ..+..+++.|+||.++..|.++|+++.+
T Consensus 179 ~--~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 179 K--DVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred c--ccCCEEEEecCeecccCCCCeEEEEEec
Confidence 1 1356799999999998789999998774
No 252
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=3.8e-18 Score=168.32 Aligned_cols=341 Identities=15% Similarity=0.070 Sum_probs=221.9
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcC-------CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREG-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
+..|+|-..++- .++.+.+++...+.+. ...|+......++.....++..+.||.. .-+|-.-+|++ |
T Consensus 49 ~~~l~LiasEN~--~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~anvqp~Sg~~-A 123 (493)
T PRK13580 49 RSSLKLIASENY--SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAYVQPHSGAD-A 123 (493)
T ss_pred hcCceEeccccc--CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--cccccCCCcHH-H
Confidence 455777666654 3567777777666542 1334445566677777778888888743 34666666655 5
Q ss_pred HHHHHHHhcCC-------------------------------CCeEEEcCCCCCChH-----HHHHHcCCEEEEecCcCC
Q 012124 167 ILQAVLAVCSP-------------------------------GDEVIIPAPFWVSYP-----EMARIADATPVILPTRIS 210 (470)
Q Consensus 167 l~~~~~~l~~~-------------------------------gd~Vlv~~p~y~~~~-----~~~~~~g~~~~~v~~~~~ 210 (470)
...++.++++| ||+|+-.++...++. ..+.....+.+.++++.+
T Consensus 124 n~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~ 203 (493)
T PRK13580 124 NLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD 203 (493)
T ss_pred HHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc
Confidence 66678888876 799998766554432 122223356777777644
Q ss_pred CCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCC
Q 012124 211 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 290 (470)
Q Consensus 211 ~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
+ ..+|++.+++.++++++.++++..+|-+ ...+ +++|.++|+++ |+++++|++|....+++..... .+.+..
T Consensus 204 ~-g~iD~d~l~~~~~~~~plvii~g~S~~~-~~~d---l~~i~eia~~~-gA~L~VD~AH~~Gligg~~~~~--~~~~~~ 275 (493)
T PRK13580 204 T-GLLDYDEIAALAREFKPLILVAGYSAYP-RRVN---FAKLREIADEV-GAVLMVDMAHFAGLVAGKVFTG--DEDPVP 275 (493)
T ss_pred c-CccCHHHHHHHHhhcCCEEEEeCccccC-CCcC---HHHHHHHHHHc-CCEEEEECchhhceeccccchh--hcCCCC
Confidence 3 4599999999999888888888877764 4667 88889999999 9999999999976655332110 011112
Q ss_pred CceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 370 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 370 (470)
+..|+++|++|++ .|.+.|++++++++++.+.........++.+....+++.++..-. ....++.++++.++.+.|
T Consensus 276 ~~D~vtgT~hKaL--~GP~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~--~~ef~~y~~~l~~Na~~L 351 (493)
T PRK13580 276 HADIVTTTTHKTL--RGPRGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR--TPEFQKYAQQVVDNARAL 351 (493)
T ss_pred CCcEEEeCChhhc--cCCCeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHH
Confidence 3458999999998 334469999999999988655433333333333333333333211 111255677888899999
Q ss_pred HHHhccCCCCeecCC-CceEEEeeeccCccCCcccCCCCCCCHH-HHHHHHHHcCCEEEECCCCCCC------CCcEEEE
Q 012124 371 VKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSE-SLCRYLLDKAQVALVPGDAFGD------DTCIRIS 442 (470)
Q Consensus 371 ~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~L~~~~gI~v~pg~~f~~------~~~iRls 442 (470)
.+.|.+. |+.+... .....+++.+.+.- ... .+.+.| ++.||.+.+-..... ...|||+
T Consensus 352 a~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----------~~g~~a~~~L-~e~GI~vn~i~~Ptvp~g~~~~srLRIg 418 (493)
T PRK13580 352 AEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----------LTGRQAESAL-LDAGIVTNRNSIPSDPNGAWYTSGIRLG 418 (493)
T ss_pred HHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----------HHHHHHHHHH-HHCCeEEccccCCCCCCCCCCCceEEec
Confidence 9999887 8876521 22344777876430 123 344454 556999875433221 4579999
Q ss_pred eec------CHHHHHHHHHHHHHHHHhh
Q 012124 443 YAA------SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 443 ~~~------~~~~i~~~l~~l~~~l~~~ 464 (470)
... ++++|++.++.|.++++..
T Consensus 419 ~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 419 TPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred cchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 765 5799999999999888753
No 253
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.84 E-value=4.7e-18 Score=170.69 Aligned_cols=358 Identities=14% Similarity=0.086 Sum_probs=214.2
Q ss_pred cCCCeEEccCCCCCC--CC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCc-EEEecChHHHH
Q 012124 92 AGVSVIRLAAGEPDF--DT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ-ILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~--~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~-i~it~g~~~al 167 (470)
+|+.++|+..|.... .. ++.+.+++.+++.+....+. ..-..+.+..+++.+....+....... ++.++++++|.
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~ 115 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT-LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAV 115 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc-cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHH
Confidence 677889999886433 33 78999999999876332211 111235666777777654431111134 45568999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCCCC--Cc----cCH----HhHhh
Q 012124 168 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISEN--FL----LDP----KVLES 222 (470)
Q Consensus 168 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~--~~----~d~----~~l~~ 222 (470)
+.+++... ....+|+...-+|++....+... |. .+..++....-. ++ -+. +.+++
T Consensus 116 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (442)
T TIGR00709 116 EAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFEN 195 (442)
T ss_pred HHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 99988643 22367888899999887554432 20 122233211000 00 011 12333
Q ss_pred hcc------CCceEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEE
Q 012124 223 KLT------EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 295 (470)
Q Consensus 223 ~l~------~~~~~i~l~~p-~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 295 (470)
.+. +++.++++... +|+....+|++.+++|.++|++| |+++|.||++.+|...+. ......+.- ... |+
T Consensus 196 ~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~-~~a~~~~gv-~PD-iv 271 (442)
T TIGR00709 196 FIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH-DIKLILDEVQAGFGRSGT-MFAFEHAGI-EPD-FV 271 (442)
T ss_pred HHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCc-hhHHHHcCC-CCc-EE
Confidence 332 35667776444 45555668999999999999999 999999999998755442 222222221 112 22
Q ss_pred EeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012124 296 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 375 (470)
Q Consensus 296 i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 375 (470)
+++|.++ .|+++|+++++++ ++.+.......+++.+++.+.++.+.|+.- ++ ..+.+.++++.+++.+.|+
T Consensus 272 --~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i---~~--~~l~~~~~~~g~~l~~~L~ 342 (442)
T TIGR00709 272 --VMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYW---KD--DNLAQNAQERGERITSFLD 342 (442)
T ss_pred --EEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHH
Confidence 3899998 6999999999987 454432233467788999999999988641 11 1334455555555655555
Q ss_pred c----CCCCeecCCCceEEEeeeccCccCC-cccCCCC--CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012124 376 E----LEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 446 (470)
Q Consensus 376 ~----~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~--~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~ 446 (470)
+ .+.+ .....-|+++.+++.+.... ....... ......+...++++ ||.+.+.... .+.+|+.... +
T Consensus 343 ~l~~~~~~v-~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~--~~~l~~~Ppl~it 418 (442)
T TIGR00709 343 DMIKEHPCI-GNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN-GLLLETGGRE--GEVFRLLCPITID 418 (442)
T ss_pred HHHHhCCCe-eeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEECCCCCC
Confidence 4 2212 11223466666776432000 0000000 00134566666655 9998764322 4678887665 9
Q ss_pred HHHHHHHHHHHHHHHHhhCCC
Q 012124 447 LTTLQAAVERIKKGLLTLRPG 467 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~~~~~ 467 (470)
++++++++++|+++++++..+
T Consensus 419 ~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 419 QEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876443
No 254
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=4.2e-18 Score=168.48 Aligned_cols=334 Identities=14% Similarity=0.131 Sum_probs=217.3
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++||..|. ..+.. +|.+.+++.+++.+....+ .....++...+++++.+.. ..+.+++++++++|.+
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e 107 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANE 107 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHH
Confidence 577889999864 22333 7889999999887533222 2234678888999887532 2368999999999999
Q ss_pred HHHHHhc------CCC-CeEEEcCCCCCChHHH-HHHcCCEEEE---ecCcCCCCC----ccCHHhHhhhccCCceEEEE
Q 012124 169 QAVLAVC------SPG-DEVIIPAPFWVSYPEM-ARIADATPVI---LPTRISENF----LLDPKVLESKLTEKSRLLIL 233 (470)
Q Consensus 169 ~~~~~l~------~~g-d~Vlv~~p~y~~~~~~-~~~~g~~~~~---v~~~~~~~~----~~d~~~l~~~l~~~~~~i~l 233 (470)
.+++... ++| +.|+..+.+|++.... +...|..... .|.. .++ ..|++.+++.+.+++++|++
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV--PGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC--CCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9998764 134 5788888888886543 3333322111 1111 011 13789999999877888877
Q ss_pred cCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCcccccccceee
Q 012124 234 CSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLG 311 (470)
Q Consensus 234 ~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G 311 (470)
...++..|... +++.+++|.++|++| |+++|.||++..+...+.... ....+.+ | +.+|+|.++ .|+.+|
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~GRtG~~~a~~~~gv~P--D----i~t~gK~lg-~G~p~~ 257 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQH-GLLLIVDEVQTGCGRTGTLFAYELSGIEP--D----IMTLGKGIG-GGVPLA 257 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCcchhhHhhcCCCC--c----eeeehhhhh-CCcceE
Confidence 76677788764 799999999999999 999999999997533332110 1112222 2 567899998 789999
Q ss_pred EEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC---CCCeecCCCce
Q 012124 312 YIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGA 388 (470)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g 388 (470)
.+++++++.. +.......+++.+++...++.+.|+.- + -.++.+..+++-+++.+.|+++ .++.... .-|
T Consensus 258 av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l---~--~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G~G 330 (395)
T PRK03715 258 ALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQL---L--APGFLEGVRARGEYLKEKLLELSEERGLEGER-GEG 330 (395)
T ss_pred EEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-cce
Confidence 9999888752 221122345567888888887777641 1 1234445555555555555542 1343222 335
Q ss_pred EEEeeeccCccCCcccCCCCCCCHHHHHHHHHH--cCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 389 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD--KAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
+.+-+.+.+. ....+.+.+.+ +.||.+.+.. .+.+|++... +++++++++++|+++++++
T Consensus 331 lm~~i~l~~~------------~~~~~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 331 LLRALLLGKD------------IGPQIVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred eEEEEEecCc------------hHHHHHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 6566777531 12334333221 1289886532 3689999876 9999999999999998764
No 255
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=7.5e-18 Score=169.04 Aligned_cols=354 Identities=15% Similarity=0.154 Sum_probs=214.3
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+... +.......+....+++.+.+..+.. ..+.+++++++++|.+
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA~e 117 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH-YTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDAND 117 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHH
Confidence 6778999988753 3333 78999999999875321 1111122355566666666543211 1258999999999999
Q ss_pred HHHHHhc-CCC-CeEEEcCCCCCChHHHHH-HcCC-------------EEEEecCcCCCC--Cc-cC-------HHhHhh
Q 012124 169 QAVLAVC-SPG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISEN--FL-LD-------PKVLES 222 (470)
Q Consensus 169 ~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~~--~~-~d-------~~~l~~ 222 (470)
.+++... -.| ..|+..+-+|++...... ..+. .++.+|...... +. .+ ++.+++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE 197 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence 9988632 123 568888888988764332 2221 122333221100 00 01 234444
Q ss_pred hcc-----CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc--ccCCCCCceE
Q 012124 223 KLT-----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA--SLPGMWERTL 294 (470)
Q Consensus 223 ~l~-----~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~--~~~~~~~~~i 294 (470)
.+. +++.+|++...+...|.. .+++.+++|.++|++| |+++|.||++..|...+.. .... .+.+ +
T Consensus 198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tg~GrtG~~-~a~~~~gv~p--D--- 270 (445)
T PRK08593 198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH-GILFAVDDIQQGLGRTGKW-SSISHFNITP--D--- 270 (445)
T ss_pred HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchH-HHHHhcCCCC--C---
Confidence 332 456677776667777875 7899999999999999 9999999999876433321 1111 2222 2
Q ss_pred EEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 012124 295 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 374 (470)
Q Consensus 295 ~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 374 (470)
+-+|+|.++ .|+++|++++++++++.+......++++.+++...++.+.|+.-.. ++.+++.++.-+..++.+.+..
T Consensus 271 -i~t~gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~ 347 (445)
T PRK08593 271 -LMSFGKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-ESLLQRSAEKGEYARKRFDQWV 347 (445)
T ss_pred -Eeeeccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 447999998 8999999999999998876434445777899998888888864211 2223333333233333333322
Q ss_pred ccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHH
Q 012124 375 GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQA 452 (470)
Q Consensus 375 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~ 452 (470)
++.+ +......-|+++.+.+....... .........+++.++++ ||.+.+.. .+.+|++.+. +++++++
T Consensus 348 ~~~~-~v~~vrG~Gl~~gi~l~~~~~~~---~~~~~~~~~~~~~~~~~-Gv~~~~~~----~~~lr~~p~l~~t~~~id~ 418 (445)
T PRK08593 348 SKYN-FVGDVRGYGLSIGIDIVSDKKLK---TRDNEAALKICNYCFEH-GVVIIAVA----GNVLRFQPPLVITYEQLDT 418 (445)
T ss_pred hcCC-cEEEEeccceEEEEEEecCCCcC---CCcHHHHHHHHHHHHHC-CeEEeccC----CCEEEEECCCccCHHHHHH
Confidence 3333 21112233555555553210000 00000234677777765 99886631 3678988775 9999999
Q ss_pred HHHHHHHHHHhhCC
Q 012124 453 AVERIKKGLLTLRP 466 (470)
Q Consensus 453 ~l~~l~~~l~~~~~ 466 (470)
++++|.++++++..
T Consensus 419 ~~~~l~~~l~~~~~ 432 (445)
T PRK08593 419 ALNTIEQAFTALEA 432 (445)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887643
No 256
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.83 E-value=8.9e-18 Score=163.33 Aligned_cols=354 Identities=15% Similarity=0.161 Sum_probs=229.0
Q ss_pred HHHHHHHhcCCCeEEccCCCCCCC--C---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEE
Q 012124 84 DQATALAQAGVSVIRLAAGEPDFD--T---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 158 (470)
Q Consensus 84 ~~~~~~~~~~~~~i~l~~g~~~~~--~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 158 (470)
++.+.+.+.|.+...|...+-... + ..++.++....+..+.-.|..++.+.+|.+++++++ ..++++
T Consensus 19 ~r~~~l~~ag~n~f~l~~~~v~iDLltDsgT~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~--------G~~~av 90 (450)
T TIGR02618 19 EREKKMQEAGYNTFLLNSEDVYIDLLTDSGTNAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELY--------GFKYVV 90 (450)
T ss_pred HHHHHHHHcCCCcccCccCceEEEcccCCCcHHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHH--------CCCeEE
Confidence 344555566666666666553221 1 255655533333344556988889999999999996 335899
Q ss_pred EecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH-HHHHcCCEEEEecCcC--------CCCCccCHHhHhhhccC---
Q 012124 159 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE-MARIADATPVILPTRI--------SENFLLDPKVLESKLTE--- 226 (470)
Q Consensus 159 it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~v~~~~--------~~~~~~d~~~l~~~l~~--- 226 (470)
.+++++.|+.+++...++|||.| +.++|..... .++..|+..+.++.+. ...+.+|++.|++++++
T Consensus 91 ~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~ 168 (450)
T TIGR02618 91 PTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA 168 (450)
T ss_pred EcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC
Confidence 99999999998877788999987 6677755444 4788999777775431 23456899999999975
Q ss_pred -CceEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCEEEEEecccccc--cc-----CCCCccccc----ccCCCCCce
Q 012124 227 -KSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI--IY-----APATHTSFA----SLPGMWERT 293 (470)
Q Consensus 227 -~~~~i~l~~p~n-PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~--~~-----~~~~~~~~~----~~~~~~~~~ 293 (470)
++++|.+.+++| ..|.++|.++++++.++|++| |+.||+|.+...- .+ .+....++. .+.. .-.
T Consensus 169 ~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~-Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~--~aD 245 (450)
T TIGR02618 169 DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH-GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMS--YAD 245 (450)
T ss_pred cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc-CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhc--cCc
Confidence 344677777777 568999999999999999999 9999999987541 11 111122331 1111 112
Q ss_pred EEEeccCcccccccceeeEEE-cCHHHHHHHHHHhhhccC----CC-ChHHHHHHHHHHhcCCCChHHHHHHHHHH-HHH
Q 012124 294 LTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFTS----GA-SSISQKAGVAALGLGYAGGEVVSKMVKAF-RER 366 (470)
Q Consensus 294 i~i~S~sK~~~~~G~r~G~~~-~~~~~~~~l~~~~~~~~~----~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~-~~~ 366 (470)
.+..|..|..+.|- -|+++ .+++++++++.....+.. +. ..-...+++..|. +++++....+ ...
T Consensus 246 ~~~~S~~Kd~~~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~------e~~~~~y~~~r~~~ 317 (450)
T TIGR02618 246 GCTMSGKKDCLVNI--GGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIR------EAVDYEYIEHRVKQ 317 (450)
T ss_pred EEEEeeccCCCCCC--ceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHH------HhhhHHHHHHHHHH
Confidence 47788888876441 26666 588899988877544311 11 1112223333333 3333322222 234
Q ss_pred HHHHHHHhccCCCCeecCCCceEEEeeeccCccC-CcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCC-CC--------
Q 012124 367 RDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVALVP-GDAF-GD-------- 435 (470)
Q Consensus 367 ~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~gI~v~p-g~~f-~~-------- 435 (470)
.++|.+.|.+. |+.+..|.+|..++++...... .+... -....++..|..+.||--.- |+.. +.
T Consensus 318 a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~----~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~ 392 (450)
T TIGR02618 318 VRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQ----FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHH 392 (450)
T ss_pred HHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhh----ChHHHHHHHHHHHhCccEEeecceecccCCCCCccc
Confidence 67888888888 9988778888878887533210 00111 15678888888788884432 3321 11
Q ss_pred ---CCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012124 436 ---DTCIRISYAA---SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 436 ---~~~iRls~~~---~~~~i~~~l~~l~~~l~~ 463 (470)
-.-+||++.. +.+.++-..++|..+.++
T Consensus 393 ~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 393 RPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred CCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1369999986 888899999998888764
No 257
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=9.6e-18 Score=169.30 Aligned_cols=337 Identities=12% Similarity=0.068 Sum_probs=210.9
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHHHcCCC-CCCC---CcC---cHHHHHHHHHHHHHHcCCCCCCCcEEEe---cCh
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFT-RYTP---NAG---TLELRSAICHKLKEENGLSYTPDQILVS---NGA 163 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~-~y~~---~~g---~~~lr~~ia~~l~~~~g~~~~~~~i~it---~g~ 163 (470)
+..|+|...++- .++.+++++...+.+... +++. ..| ...+.+...+.+.+.+| ++++++.++ +|+
T Consensus 34 ~~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~--a~~~~~~~~~~~~sg 109 (452)
T PTZ00094 34 IEGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG--LDPEEWGVNVQPYSG 109 (452)
T ss_pred HcCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC--CCcccceeecCCCch
Confidence 455888777764 466788888777754221 2211 122 22222222334445556 356677666 788
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----------HcCCEEEEecCcCCCCCccCHHhHhhhccC-CceEEE
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----------IADATPVILPTRISENFLLDPKVLESKLTE-KSRLLI 232 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----------~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~ 232 (470)
+++...++.+++++||+|++.+..+.++..... ..+.+++.++++.+ +.+|++.|++.++. ++++++
T Consensus 110 t~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~~L~~~l~~~~~~lvi 187 (452)
T PTZ00094 110 SPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYDKLEELAKAFRPKLII 187 (452)
T ss_pred HHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHHHHHHHHHHhCCCEEE
Confidence 899999999999999999998777766543221 11234455556543 45999999999954 677666
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE
Q 012124 233 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312 (470)
Q Consensus 233 l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~ 312 (470)
+. ++.+|...| +++|.++|+++ |+++++|++++.........+ .+- .+..++++|++|+++ |.+.|+
T Consensus 188 ~~--~s~~g~~~d---i~~I~~i~~~~-ga~l~vDaaq~~G~i~~~~~~----~~~-~~~D~l~~S~hK~l~--GP~Gg~ 254 (452)
T PTZ00094 188 AG--ASAYPRDID---YKRFREICDSV-GAYLMADIAHTSGLVAAGVLP----SPF-PYADVVTTTTHKSLR--GPRSGL 254 (452)
T ss_pred Ee--CCCCCCccC---HHHHHHHHHHc-CCEEEEeccchhccccCCCCC----CCC-CCCcEEEcCCccCCC--CCCceE
Confidence 53 335999999 77888999999 999999999986444321111 111 134588999999872 333488
Q ss_pred EEcCHHHHHHHHHHh-----hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc
Q 012124 313 IAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 387 (470)
Q Consensus 313 ~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 387 (470)
++..+++.+.+.... ..+..+++.....++..+++.- .....++.+++..++.+++.+.|.+. |+.+..+..
T Consensus 255 l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~--~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~ 331 (452)
T PTZ00094 255 IFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV--QSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGT 331 (452)
T ss_pred EEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCC
Confidence 887765554333211 1111234555555555556531 02345567788888999999999876 777654221
Q ss_pred -eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE-CCCCCC----CCCcEEEEeec------CHHHHHHHHH
Q 012124 388 -AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAFG----DDTCIRISYAA------SLTTLQAAVE 455 (470)
Q Consensus 388 -g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~-pg~~f~----~~~~iRls~~~------~~~~i~~~l~ 455 (470)
.....+.+... ..+..++...| +++||.+. ++..+. .++++|+++.. +++||+.+++
T Consensus 332 ~~~~~~v~~~~~----------~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~ 400 (452)
T PTZ00094 332 DNHLVLVDLRPF----------GITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVAD 400 (452)
T ss_pred CCceEeecCCcC----------CCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHH
Confidence 22234444321 01456666655 56699994 443332 24789999864 3899999999
Q ss_pred HHHHHHHh
Q 012124 456 RIKKGLLT 463 (470)
Q Consensus 456 ~l~~~l~~ 463 (470)
.|.++++.
T Consensus 401 ~l~~~~~~ 408 (452)
T PTZ00094 401 FLDRAVKL 408 (452)
T ss_pred HHHHHHHH
Confidence 99998874
No 258
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.83 E-value=5.4e-18 Score=167.26 Aligned_cols=304 Identities=19% Similarity=0.217 Sum_probs=210.2
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChH-HHHHHHHHHhcC---CCCeEEEcCCCCCChHHHHHHcCCEEEEecC-
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAK-QSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIADATPVILPT- 207 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~-~al~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~- 207 (470)
...+...+.+.+.+..|.+ +-+..++++|++ .++.+++.++-. +||.|+++.-+|.+....+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 4566777777777667753 224688888888 588777776642 5899999999999999999999999999995
Q ss_pred cCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc-
Q 012124 208 RISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF- 283 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~- 283 (470)
..++++.+|++.|++++++ +..++++.+|+ |+.....+++++|+++|++| |+++|+|++|+..... ...+
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~-gI~lIvDaAyg~~~~~---~~~~~ 255 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANY-DIPHIVNNAYGLQSNK---YMELI 255 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHc-CCEEEEECcCcCcChh---hhhhh
Confidence 2346788999999999975 44566666665 45545556699999999999 9999999999852210 0011
Q ss_pred -cccCCCCCc-eEEEeccCcccccccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHH
Q 012124 284 -ASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 360 (470)
Q Consensus 284 -~~~~~~~~~-~i~i~S~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~ 360 (470)
..+. .++ .+++.|++|.+.+||. .|.++. ++++++.+..... ....+.+.|.+...++.. +.+.++++.
T Consensus 256 ~~g~~--~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~--g~~~~s~~~~~~~~ll~~---G~~g~~~li 327 (444)
T TIGR03531 256 NKAIK--VGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYP--GRASASPSLDVLITLLSL---GSKGYLELL 327 (444)
T ss_pred hcccc--ccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhcc--CCCCChHHHHHHHHHHHh---CHHHHHHHH
Confidence 0111 122 5778899999987776 344445 7788887776432 223456778888888876 478889999
Q ss_pred HHHHHHHHHHHHHhccC---CCCeecC-CCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCE----EEECCC-
Q 012124 361 KAFRERRDFLVKSFGEL---EGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV----ALVPGD- 431 (470)
Q Consensus 361 ~~~~~~~~~l~~~L~~~---~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI----~v~pg~- 431 (470)
+++.++++++.+.|+++ -|.++.. |...+.+.+.+.... ..+...+...|..+ +| .|.||.
T Consensus 328 ~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---------~~~~~~~g~~l~~~-~v~g~r~v~~~~~ 397 (444)
T TIGR03531 328 KERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---------GKDPTMLGSMLYSR-RVTGPRVVTNGDS 397 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---------ccCHHHHHHHHHhC-CCCCceeecCCCc
Confidence 99999999999999875 2555543 344455555554221 01567777777655 44 245655
Q ss_pred ------CC---CC------CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 432 ------AF---GD------DTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 432 ------~f---~~------~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
.| +. -.|+-++.+. +.+|++.++.+|++++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 398 KTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred eEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 23 11 1255555443 8899999999998763
No 259
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=1.5e-17 Score=165.91 Aligned_cols=335 Identities=16% Similarity=0.078 Sum_probs=200.7
Q ss_pred CCeEEccCCCCCCCChHHHHHHHHHHH-HcCCCCCCC---CcCcHHHHHHHHH----HHHHHcCCCCCCCcE-EEecChH
Q 012124 94 VSVIRLAAGEPDFDTPVLIAEAGINAI-REGFTRYTP---NAGTLELRSAICH----KLKEENGLSYTPDQI-LVSNGAK 164 (470)
Q Consensus 94 ~~~i~l~~g~~~~~~~~~~~~a~~~~~-~~~~~~y~~---~~g~~~lr~~ia~----~l~~~~g~~~~~~~i-~it~g~~ 164 (470)
++.++|...++- .+|.+++++...+ .+...+|+. ..| .+..+.+.+ .+.+.+|. +.. +.+++++
T Consensus 28 ~~~~~l~~sen~--~~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~----~~alv~~~SG~ 100 (416)
T PRK13034 28 QDHLELIASENF--TSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGC----DYANVQPHSGS 100 (416)
T ss_pred hcCeeecccccC--CCHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCC----CceEEecCCcH
Confidence 345777666654 3788888888875 332121111 123 233444444 55555553 245 4467888
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCCCh-HHHHHH--cCCEE--EEecCcCCCCCccCHHhHhhhcc-CCceEEEEcCCCC
Q 012124 165 QSILQAVLAVCSPGDEVIIPAPFWVSY-PEMARI--ADATP--VILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSN 238 (470)
Q Consensus 165 ~al~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~~~--~g~~~--~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l~~p~n 238 (470)
.|+..++.++++|||+|+++..+|.+. ...++. .+... +.++++.. ++.+|++.+++.++ .++++|++..+.
T Consensus 101 ~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klVi~~~~~- 178 (416)
T PRK13034 101 QANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLIIAGFSA- 178 (416)
T ss_pred HHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEEEECCCc-
Confidence 999999999999999999999988763 221221 12222 34444332 34589999999884 367888765554
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 318 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~ 318 (470)
+|...+ +.+|.++|++| |+++|+|++++...+.... ....+ ..-.++++|++|.++.+ .-|++++.++
T Consensus 179 -~g~~~d---l~~l~~la~~~-g~~livD~Aha~G~~~~g~--~~~~~---~~~Di~~~s~~K~l~g~--~GG~v~~~~~ 246 (416)
T PRK13034 179 -YPRELD---FARFREIADEV-GALLMVDMAHIAGLVAAGE--HPNPF---PHAHVVTTTTHKTLRGP--RGGMILTNDE 246 (416)
T ss_pred -cccccC---HHHHHHHHHHc-CCEEEEeCcccccCcccCC--CCCCC---CCceEEEEeCcccCCCC--CCeEEEECcH
Confidence 456666 77888889999 9999999998864443211 11111 23458999999999312 2477777654
Q ss_pred H-HHHHHHHhhhc-cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC-CceEEEeeec
Q 012124 319 F-VAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDF 395 (470)
Q Consensus 319 ~-~~~l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~ 395 (470)
. .+.++...... ..+.++....++...+..- ......+.++++.++.+++.+.|.+. |+.+..+ .....+++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~ 323 (416)
T PRK13034 247 EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEA--LQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDL 323 (416)
T ss_pred HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEc
Confidence 4 44444322211 1122333333333222210 01223355688888999999999888 8877542 2233355555
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC------CCCCCCcEEEEeec------CHHHHHHHHHHHHHHHHh
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD------AFGDDTCIRISYAA------SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~------~f~~~~~iRls~~~------~~~~i~~~l~~l~~~l~~ 463 (470)
...- .+...+.+.| ++.||.+.+-. .-..+..+|++++. ++++++++++.|++++.+
T Consensus 324 ~~~~----------~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 324 RPKG----------LSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred CCCC----------CCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 4320 0344555655 45599887511 11124579998653 679999999999988764
No 260
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.83 E-value=1.3e-17 Score=166.06 Aligned_cols=335 Identities=13% Similarity=0.091 Sum_probs=211.5
Q ss_pred cCCCeEEccCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g--~~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..| ...+.. +|.+.+++.+++.+..+. ...-..+.+..+++.+.+..+. ..+.+++++++++|.+
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~--~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~SGsEA~e 148 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH--SQELLDPLRALLAKTLAALTPG--KLKYSFFCNSGTESVE 148 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc--ccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHHHH
Confidence 67789999888 444544 788999999998753211 1112245566677776654331 2267999999999999
Q ss_pred HHHHHhcC----CC-CeEEEcCCCCCChHHHHHHcCCE-------------EEEecCcCCCCCccCHHhHhhhcc-----
Q 012124 169 QAVLAVCS----PG-DEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT----- 225 (470)
Q Consensus 169 ~~~~~l~~----~g-d~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~l~~~l~----- 225 (470)
.+++.... .| ..|+....+|++..........+ +..+|. .|.+.+++.++
T Consensus 149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l~~~~~~ 221 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKALNECKKT 221 (442)
T ss_pred HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHHHHHhcC
Confidence 99886432 23 67888999999876544332211 112221 25677766663
Q ss_pred -CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc--cccCCCCCceEEEeccCc
Q 012124 226 -EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF--ASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 226 -~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~--~~~~~~~~~~i~i~S~sK 301 (470)
+++.+|++...+...|.. .+++.++++.++|++| |+++|.||++..|.-.+. .... ..+.+ | +-+|+|
T Consensus 222 ~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~-~~a~e~~gv~P--D----ivt~gK 293 (442)
T TIGR03372 222 GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEF-GALLILDEVQTGMGRTGK-MFACEHEGVQP--D----ILCLAK 293 (442)
T ss_pred CCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeecccCCCcccc-chhhhhcCCCC--C----eeeehh
Confidence 245666665556666764 4788999999999999 999999999987532222 1111 11222 2 345899
Q ss_pred cccccc-ceeeEEEcCHHHHHHHHH--HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 012124 302 AFAMTG-WRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 378 (470)
Q Consensus 302 ~~~~~G-~r~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 378 (470)
.+| .| +++|.+++.+++.+.+.. .....+++.++++..++.+.|+.-.. ++..++.++.-...++.|.+...+.|
T Consensus 294 ~lg-~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~~~~~ 371 (442)
T TIGR03372 294 ALG-GGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KNLPAQAAIKGDFLLDGFQQLAAEYP 371 (442)
T ss_pred hhc-CCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 998 88 699999999999887742 12345667789888888887764110 12233333322223333333323343
Q ss_pred CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHH
Q 012124 379 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVER 456 (470)
Q Consensus 379 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~ 456 (470)
..-......|+++.+.+.+.. ....+++.|+++ ||.+.+... ..+.+|+.... +++++++++++
T Consensus 372 ~~i~~vRG~Gl~~giel~~~~-----------~~~~i~~~l~~~-Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~ 437 (442)
T TIGR03372 372 DLIIEARGKGLLMAIEFRDNE-----------IGYAFAKELFQQ-NILVAGTLN--NAKSIRIEPPLTITIEQCALVIKA 437 (442)
T ss_pred CceEEEecceEEEEEEeCChH-----------HHHHHHHHHHHC-CcEEeecCC--CCCEEEEECCcccCHHHHHHHHHH
Confidence 221111234676777875420 345678888765 998865321 24689988775 99999999999
Q ss_pred HHHHH
Q 012124 457 IKKGL 461 (470)
Q Consensus 457 l~~~l 461 (470)
|++++
T Consensus 438 l~~~~ 442 (442)
T TIGR03372 438 AKDAL 442 (442)
T ss_pred HHHhC
Confidence 98753
No 261
>PRK06541 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-17 Score=167.99 Aligned_cols=355 Identities=13% Similarity=0.130 Sum_probs=216.9
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+..+ +.......+....+++.+.+..+ ...+.+++++++++|.+
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseAve 126 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAF-FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcC-ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHHHH
Confidence 6778999988852 2333 78899999999876321 11111223555666666665332 12368999999999999
Q ss_pred HHHHHhcC-------C-CCeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCCC---CCccC--------
Q 012124 169 QAVLAVCS-------P-GDEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE---NFLLD-------- 216 (470)
Q Consensus 169 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~---~~~~d-------- 216 (470)
.+++.... + ..+|+...-+|++....+... |. .+..+|....- .++-+
T Consensus 127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWA 206 (460)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHH
Confidence 98886431 1 367888888898876433321 11 12223221100 01112
Q ss_pred HHhHhhhcc---CCceEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCC
Q 012124 217 PKVLESKLT---EKSRLLILCSP-SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 291 (470)
Q Consensus 217 ~~~l~~~l~---~~~~~i~l~~p-~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
++.+++.+. .+..+.++..| ++++|... +.+.+++|.++|++| |+++|.||++..|...+.. .....+.- ..
T Consensus 207 ~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tGfGR~G~~-~a~~~~gv-~P 283 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY-DVLLVSDEVICAFGRLGEM-FGCERFGY-VP 283 (460)
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchh-hhhhhcCC-CC
Confidence 356777764 23344445555 89999865 599999999999999 9999999999776222211 11111111 11
Q ss_pred ceEEEeccCcccccccc-eeeEEEcCHHHHHHHHHHh----hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 292 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~----~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
. +-+|+|.++ .|+ ++|++++++++++.+.... ...+++.+++...++.+.|+.- . -+...+..+++
T Consensus 284 D---ivt~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l---~--~~~~~~~~~~~ 354 (460)
T PRK06541 284 D---IITCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIF---E--REGLLDHVRDN 354 (460)
T ss_pred C---EEEeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHH---H--hccHHHHHHHH
Confidence 1 335899998 897 9999999999988875421 2236667888888887777641 1 12345666777
Q ss_pred HHHHHHHhccCCCCee--cCCCceEEEeeeccCccCCcccCCCCCC----CHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012124 367 RDFLVKSFGELEGVKM--SEPQGAFYLFIDFSTYYGSEAEGFGKIE----NSESLCRYLLDKAQVALVPGDAFGDDTCIR 440 (470)
Q Consensus 367 ~~~l~~~L~~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~~gI~v~pg~~f~~~~~iR 440 (470)
.+++.+.|+++....+ .....|.++.+.+.+..... ....... ....+.+.|+++ ||.+.+.. . ..+.+|
T Consensus 355 g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~-~-g~~~lr 430 (460)
T PRK06541 355 EPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATK-ETFTDDESERLLRGFLSPALFEA-GLYCRADD-R-GDPVVQ 430 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccc-cCCcchhhhhhHHHHHHHHHHhC-CeEEEecC-C-CCCEEE
Confidence 7777777766522211 11233555666663210000 0000000 012456667665 99998731 1 136799
Q ss_pred EEee--cCHHHHHHHHHHHHHHHHhhC
Q 012124 441 ISYA--ASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 441 ls~~--~~~~~i~~~l~~l~~~l~~~~ 465 (470)
|+.. .+++++++++++|.++++++.
T Consensus 431 l~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 431 LAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9988 499999999999999998754
No 262
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.1e-17 Score=154.99 Aligned_cols=324 Identities=18% Similarity=0.182 Sum_probs=206.8
Q ss_pred EEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 012124 97 IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS 176 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~ 176 (470)
++|.+.+.. .+.+++++++.++-..+...|+.+ +.-+++.+++++.+|. +.++++.++|++..+++.+.++
T Consensus 2 ~~f~SDn~~-g~~~~m~eam~~a~~~~~~~YG~D----~~~~~~e~~~ae~~g~----~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 2 IDFRSDNVA-GPTPEMREALAAANAVGDDVYGED----PTTNALEQRIAELFGK----EAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CccccCccC-CCCHHHHHHHHhccccCCCCCCCC----HHHHHHHHHHHHHhCC----ceEEEecCccHHHHHHHHHhcC
Confidence 455555443 356788888887754456667554 5555555555555553 6899999999999999999999
Q ss_pred CCCeEEEcCCCCCChHH--HHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCCcccCCCHHH
Q 012124 177 PGDEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNL 248 (470)
Q Consensus 177 ~gd~Vlv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nPtG~~~s~~~ 248 (470)
||+.|++..-+|..... ..+.++ .+.+++..+..+..+++|.++..+.. .+.++++.+.+|-.|.++|.++
T Consensus 73 ~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~e 151 (342)
T COG2008 73 PGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDE 151 (342)
T ss_pred CCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHH
Confidence 99999999887765543 233333 12234444445567999999998753 3455666566658899999999
Q ss_pred HHHHHHHHHhCCCEEEEEecc--ccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEE-cCHHHHHHHHH
Q 012124 249 LDEIARIVAKHPRLLVLSDEI--YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNK 325 (470)
Q Consensus 249 ~~~l~~~~~~~~~~~iI~Dd~--~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~-~~~~~~~~l~~ 325 (470)
+++|.++|++| ++.|..|.+ +..+...+ ++...+.. .-.++.-++||..+.|+ |.++ ++.++++++..
T Consensus 152 l~~i~~~~k~~-~l~LHmDGAR~~nA~valg---~~~~~~~~--~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~ 222 (342)
T COG2008 152 LEAISAVCKEH-GLPLHMDGARLANALVALG---VALKTIKS--YVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARR 222 (342)
T ss_pred HHHHHHHHHHh-CCceeechHHHHHHHHHcC---CCHHHHHh--hCCEEEEecccCCccee---eeEEEcCHHHHHHHHH
Confidence 99999999999 999999987 33333223 23333322 12244445889987554 6554 78999999887
Q ss_pred HhhhccCCCChHH--HHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC-CceEEEeeeccCccCCc
Q 012124 326 IQSQFTSGASSIS--QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSE 402 (470)
Q Consensus 326 ~~~~~~~~~~~~~--q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~ 402 (470)
++.......+... ......+|++ +-|.... .+-....+.|.+.|+..+|+++..| ++++ +|+++++..
T Consensus 223 ~rK~~Ggl~~k~r~laA~~~~~l~~----~~~~~~~-~Han~mA~~La~~~~~~~G~~~~~~~~tN~-vf~~l~~~~--- 293 (342)
T COG2008 223 WRKRAGGLMRKARFLAAQGLYALED----DVWRLAA-DHANAMAARLAEGLEAKPGVKLAFPVETNM-VFVRLPESA--- 293 (342)
T ss_pred HHHHhcccHhhhhHHHHHHHHHHhc----cHHHHHH-HHHHHHHHHHHHhhhhcCCceeccCCcccE-EEEECChHH---
Confidence 7665554444333 3333455554 2222221 1112236778888887789988765 5555 788887531
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 403 AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 403 ~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
.+...+...+. ..|+.+.++. .-+|+..+. +++++++++..+++++
T Consensus 294 -------i~~l~~~~~~~-~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 -------IEALRLAGALF-YRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -------HHHHHhhchhh-eeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 01111111222 2244443322 358888776 8899999998887764
No 263
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.82 E-value=2.4e-17 Score=160.31 Aligned_cols=315 Identities=12% Similarity=0.124 Sum_probs=217.8
Q ss_pred ChHHHHHHHHHHHHc----CCCCCCCCcCcH---HHHHHHHHHHHHHcCCCCCCCcEEEecC-hHHHHHHHHHHhcCCCC
Q 012124 108 TPVLIAEAGINAIRE----GFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNG-AKQSILQAVLAVCSPGD 179 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~----~~~~y~~~~g~~---~lr~~ia~~l~~~~g~~~~~~~i~it~g-~~~al~~~~~~l~~~gd 179 (470)
.|..+++++.+.+.+ +...|....-.+ ++-+.+.+.+++.++.+ ...+|++++| ++.+++.++..++.+||
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 477888888888874 222232222233 66666777777777742 3357888776 99999999999999999
Q ss_pred eEEEcCCCCCChH--HHHHHcCCEEEEecCcCCC--CCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012124 180 EVIIPAPFWVSYP--EMARIADATPVILPTRISE--NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 255 (470)
Q Consensus 180 ~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~ 255 (470)
++++..-+..+.. ++++..|+ +..+..++.. +..++++.++ +++++++|.++...+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 9988777666543 57788898 7777754222 2235666555 3468899999999999999775 55
Q ss_pred HHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHH---------
Q 012124 256 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI--------- 326 (470)
Q Consensus 256 ~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~--------- 326 (470)
++.+ ++++++|.+.+. +..+..+..+ + +++.|..|.+|.|| +|++++++++++++...
T Consensus 151 ~~~~-~~l~iVDavss~----g~~~id~~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 151 PDVK-NAPLVADMSSNI----LSRPIDVSKF----G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKI 217 (349)
T ss_pred cccC-CCeEEEEccccc----cCccCCHHHc----c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHH
Confidence 6678 899999999875 2222333322 3 88889999998666 89999999888765211
Q ss_pred -h--hhccCCCChHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCCeecC--C--CceEEEeeeccCc
Q 012124 327 -Q--SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYLFIDFSTY 398 (470)
Q Consensus 327 -~--~~~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~--~~g~~~~~~~~~~ 398 (470)
. .....+++.....++.++|+.- .+. .++.+.++.++..+++++.|++++|+.... + .++..+.+.+++.
T Consensus 218 ~~~~~~~~~Tp~~~~i~al~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~ 295 (349)
T TIGR01364 218 HAENDSMYNTPPTFAIYVSGLVFKWL--KEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE 295 (349)
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh
Confidence 1 1112356666667777777641 133 488999999999999999999997763331 1 2324355566532
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
. ...++...+. +.|+++.+|.. ..+.+|+|+.. +.+||+.+++.|++++++
T Consensus 296 ~-----------~~~~~~~~~~-~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 E-----------LEKRFLKEAE-ERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred h-----------HhHHHHHHHH-HCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 0 2355655554 45998888764 34789999987 899999999999988764
No 264
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=2.9e-17 Score=164.81 Aligned_cols=345 Identities=13% Similarity=0.130 Sum_probs=217.4
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|. ..+.. ++.+.+++.+++.+... + ...-..+.+..+++.+.+... ...+.+++++++++|.+
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~-~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve 155 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL-H-SQELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTESVE 155 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc-c-ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHHHH
Confidence 677899998884 44444 78899999999875321 1 111224566667777765433 12368999999999999
Q ss_pred HHHHHhc----CCC-CeEEEcCCCCCChHHHHHH-cCCEEEE---ecCcCCCC--CccCHHhHhhhcc------CCceEE
Q 012124 169 QAVLAVC----SPG-DEVIIPAPFWVSYPEMARI-ADATPVI---LPTRISEN--FLLDPKVLESKLT------EKSRLL 231 (470)
Q Consensus 169 ~~~~~l~----~~g-d~Vlv~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~~--~~~d~~~l~~~l~------~~~~~i 231 (470)
.+++... ++| ..|+...-+|++....... .|-.... .|..+.-. .-.|.+.+++.++ +++.+|
T Consensus 156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAav 235 (459)
T PRK11522 156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAV 235 (459)
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEE
Confidence 9988642 123 4688888899987654332 2211111 11110000 0026777777774 245566
Q ss_pred EEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccc-ce
Q 012124 232 ILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WR 309 (470)
Q Consensus 232 ~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~r 309 (470)
++...+.-.|. ..|++.++++.++|++| |+++|.||++..|...+.. .....+.-..| +-+|+|.+| .| ++
T Consensus 236 IvEpv~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD----ivt~gK~lg-gG~~P 308 (459)
T PRK11522 236 ILEPIQGEGGVILPPEGYLTAVRKLCDEF-GALLILDEVQTGMGRTGKM-FACEHENVQPD----ILCLAKALG-GGVMP 308 (459)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEeccceecCCccchh-hhhhccCCCCC----EEEechhhh-CCCcc
Confidence 66555666677 45788999999999999 9999999999875322221 11111111112 337899998 88 69
Q ss_pred eeEEEcCHHHHHHHHH--HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCCeec
Q 012124 310 LGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMS 383 (470)
Q Consensus 310 ~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~ 383 (470)
+|.+++.+++.+.+.. .....+++.+++...++.+.|+.-.. + .+.++.+++-+++.+.|++ +|++-..
T Consensus 309 igav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~ 383 (459)
T PRK11522 309 IGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-Q----NLPAQAEQKGDYLLDGFRQLAREYPDLVQE 383 (459)
T ss_pred ceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-c----hHHHHHHHHHHHHHHHHHHHHHhCCCceee
Confidence 9999999988876642 22345666789888888888774211 2 2334444455555555544 3322111
Q ss_pred CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 384 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 384 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
....|.++.+.+.+.- ....+++.|+++ ||.+.+.. ...+.+|+..+. +++++++++++|.+++
T Consensus 384 VrG~Gl~~giel~~~~-----------~~~~i~~~l~~~-Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l 449 (459)
T PRK11522 384 ARGKGMLMAIEFVDNE-----------IGYNFASEMFRQ-RVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAARKAL 449 (459)
T ss_pred EEeceeEEEEEecCch-----------HHHHHHHHHHHC-CeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 1134666777775420 345677877765 99987642 124689988765 9999999999999999
Q ss_pred HhhCC
Q 012124 462 LTLRP 466 (470)
Q Consensus 462 ~~~~~ 466 (470)
+++..
T Consensus 450 ~~~~~ 454 (459)
T PRK11522 450 AAMRV 454 (459)
T ss_pred HHHHH
Confidence 87653
No 265
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=2.8e-17 Score=164.08 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=123.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~ 208 (470)
..+|.+.++++. | .+..++++++++|+.+++.++++|||+|+++.++|.+... .+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (427)
T PRK05994 65 NAVLEERVAALE----G----GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA- 135 (427)
T ss_pred HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence 456677777664 3 2357888999999999999999999999999999987543 35678999998875
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.|++.+++++++++++|++++|+||||.+++ +++|+++|+++ ++++|+|+++..... ..++ +
T Consensus 136 ------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~a~a~~~~----~~pl---~- 197 (427)
T PRK05994 136 ------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRA-GLPLIVDNTLASPYL----IRPI---E- 197 (427)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCcccccc----CCcc---c-
Confidence 2789999999989999999999999999999 88999999999 999999999974211 1111 1
Q ss_pred CCCceEEEeccCcccccccceeeEEEc
Q 012124 289 MWERTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
.+-.+++.|++|.++-+|-.+|.++.
T Consensus 198 -~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 198 -HGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred -cCCcEEEEcCccccCCCCCcEEEEEE
Confidence 24459999999999755655665444
No 266
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.8e-17 Score=165.11 Aligned_cols=155 Identities=14% Similarity=0.178 Sum_probs=124.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~ 208 (470)
..+|++.++++. | .+..++|+++++|+.+++.+++++||+|++....|.+....+ ...|++++.++.+
T Consensus 66 ~~~le~~lA~l~----g----~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~ 137 (433)
T PRK08134 66 VAVLEERVAALE----G----GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG 137 (433)
T ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC
Confidence 466777777765 3 234788999999999999999999999999999998765544 4589999998862
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
|++.+++++++++|+|++.+++||||.+.+ +++|+++|+++ |+++|+|.++..-.. ..++ .
T Consensus 138 -------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~-gi~livD~t~a~~~~----~~pl-~--- 198 (433)
T PRK08134 138 -------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEA-GVPLLVDSTFTTPYL----LRPF-E--- 198 (433)
T ss_pred -------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHc-CCEEEEECCCccccc----CCch-h---
Confidence 789999999999999999999999999999 88999999999 999999999864211 1122 1
Q ss_pred CCCceEEEeccCcccccccceeeEEEc
Q 012124 289 MWERTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
.+-.+++.|.+|.++-+|-.+|.++.
T Consensus 199 -~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 199 -HGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -cCCCEEEeccccccCCCCCceEEEEE
Confidence 34559999999999756765666544
No 267
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=1.5e-16 Score=152.22 Aligned_cols=309 Identities=19% Similarity=0.275 Sum_probs=206.4
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 187 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~ 187 (470)
-....+++.+.+..++...++ -..++.+++++|+ ...+.+.+++++.||.+++++| +.|||+|+++.-+
T Consensus 14 ~~~e~~~v~~vl~sg~i~~G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~T 83 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTGGP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFT 83 (374)
T ss_pred chHHHHHHHHHHHcCCeecCh--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCc
Confidence 467788888998887665533 5578999999986 4468899999999999999966 6999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEe
Q 012124 188 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267 (470)
Q Consensus 188 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~D 267 (470)
|....+.+...|++++.++++++ .+.+|++.+|++|++++|+|+..+- -|...+ +++|.++|++| |++||||
T Consensus 84 fvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl---~G~~~d---m~~i~~la~~~-~l~vIED 155 (374)
T COG0399 84 FVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHL---AGQPCD---MDAIMALAKRH-GLPVIED 155 (374)
T ss_pred hHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehh---ccCCCC---HHHHHHHHHHc-CCeEEEE
Confidence 99999999999999999999875 4679999999999999999985433 455556 88899999999 9999999
Q ss_pred ccccccc-cCCCCcccccccCCCCCceEEEecc--CcccccccceeeEEEc-CHHHHHHHHHHhhhcc------------
Q 012124 268 EIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT------------ 331 (470)
Q Consensus 268 d~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~--sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~------------ 331 (470)
.+++... |.+. .+.++.. +-+.|| .|.+. .| --|.++. ++++.++++.++....
T Consensus 156 aAqa~Ga~y~gk---~vGt~Gd-----~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~ 225 (374)
T COG0399 156 AAQAHGATYKGK---KVGSFGD-----IGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEE 225 (374)
T ss_pred cchhccCeecCc---ccccccc-----eEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeee
Confidence 9988532 3332 2222322 445566 59987 55 4577776 4567777765544322
Q ss_pred --CC--CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC-Cc---eEEEe-eeccCccCCc
Q 012124 332 --SG--ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QG---AFYLF-IDFSTYYGSE 402 (470)
Q Consensus 332 --~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~---g~~~~-~~~~~~~~~~ 402 (470)
++ .+.+.++....-|+ .+++..++-++..+...+.|++++++.+... .+ .++++ +.+++.
T Consensus 226 ~G~N~rm~~iqAAigl~QL~-------~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~---- 294 (374)
T COG0399 226 LGYNYRLTEIQAAIGLAQLE-------RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE---- 294 (374)
T ss_pred cccccCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC----
Confidence 11 22222222223333 2333333444455556667776655443322 22 23322 334331
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCE----EEECCCCC--------C----C-------CCcEEEEeec--CHHHHHHHHHHH
Q 012124 403 AEGFGKIENSESLCRYLLDKAQV----ALVPGDAF--------G----D-------DTCIRISYAA--SLTTLQAAVERI 457 (470)
Q Consensus 403 ~~~~~~~~~~~~l~~~L~~~~gI----~v~pg~~f--------~----~-------~~~iRls~~~--~~~~i~~~l~~l 457 (470)
..+-+.+.+.|.++ || ...|.... . . ...+.|-+.. +++++++.++.|
T Consensus 295 ------~~~R~~l~~~L~~~-gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l 367 (374)
T COG0399 295 ------GISRDALMESLKEA-GVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEAL 367 (374)
T ss_pred ------CCCHHHHHHHHHhC-CCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHH
Confidence 01456777777655 44 44442221 0 0 1246666554 889999999999
Q ss_pred HHHHHh
Q 012124 458 KKGLLT 463 (470)
Q Consensus 458 ~~~l~~ 463 (470)
++++.+
T Consensus 368 ~~~~~~ 373 (374)
T COG0399 368 KEVLGS 373 (374)
T ss_pred HHHhcc
Confidence 988753
No 268
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.81 E-value=1.7e-17 Score=157.66 Aligned_cols=202 Identities=18% Similarity=0.224 Sum_probs=158.5
Q ss_pred CCCeEEccCCCCCCCChHHHHHHHHHHHHc----CCCC-CC--CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 93 GVSVIRLAAGEPDFDTPVLIAEAGINAIRE----GFTR-YT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 93 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~----~~~~-y~--~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+.+.+.|..+.-. +.++.+.+++.+.... .... |+ ...+.++-|+.+|++++ +++.+|++|+|+|+
T Consensus 41 ~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFts~ATE 113 (428)
T KOG1549|consen 41 GTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFTSGATE 113 (428)
T ss_pred CCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEeCCchH
Confidence 3455666666543 3467777777776654 2222 32 23446788999999875 57778999999999
Q ss_pred HHHHHHHHhc-CCCC----eEEEcCCCCCChHH---HHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCC
Q 012124 166 SILQAVLAVC-SPGD----EVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 237 (470)
Q Consensus 166 al~~~~~~l~-~~gd----~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~ 237 (470)
+++++++.+. ..+| .|++.+-.|++... .++..|+++..+|+. +...+|++.+++.++++|+++.+...+
T Consensus 114 s~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I~~Vn 191 (428)
T KOG1549|consen 114 SNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSIMHVN 191 (428)
T ss_pred HHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEEEecc
Confidence 9999999873 4566 89988888887664 456789999999997 344589999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH
Q 012124 238 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 317 (470)
Q Consensus 238 nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~ 317 (470)
|.+|+.+| +++|.++|+++ ++.++.|.+++- |.-...+..+.. .++..|.+|.+|.+| +|++++.+
T Consensus 192 n~~gv~~P---v~EI~~icr~~-~v~v~~DaAQav----G~i~vDV~eln~----D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 192 NEIGVLQP---VKEIVKICREE-GVQVHVDAAQAV----GKIPVDVQELNA----DFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred cCcccccc---HHHHHHHhCcC-CcEEEeehhhhc----CCccccHHHcCc----hheeeecccccCCCc--ceEEEEcc
Confidence 99999999 99999999999 999999999986 444555665543 378888999999888 89999875
No 269
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.81 E-value=4.3e-17 Score=158.77 Aligned_cols=348 Identities=14% Similarity=0.140 Sum_probs=225.3
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCC---CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGF---TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~---~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+|+.+|||..|. ..+.. +|.+.+++.+++..-. ..|.. .+-...+++.|......+ ..+.+++++++++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~----~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGae 128 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLY----YEPYVELAEKLTALAPGS-GLKKVFFGNSGAE 128 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCccc----chhHHHHHHHHHHhCCcc-cCCeEEecCCcHH
Confidence 678899999965 44444 8999999999887522 22322 255666666666543322 4568999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCCChHHHH-HHcC-------------CEEEEecCcC--CCCCcc--------CHHh
Q 012124 166 SILQAVLAVC--SPGDEVIIPAPFWVSYPEMA-RIAD-------------ATPVILPTRI--SENFLL--------DPKV 219 (470)
Q Consensus 166 al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~-~~~g-------------~~~~~v~~~~--~~~~~~--------d~~~ 219 (470)
|.+.+++... ..+..|+...-+|++..... ...| ..++.+|... .+.+.. ..+.
T Consensus 129 A~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~ 208 (447)
T COG0160 129 AVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEY 208 (447)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHH
Confidence 9999998742 23467888888888765432 1111 2244555432 111111 2334
Q ss_pred Hhhhcc------CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCc
Q 012124 220 LESKLT------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 292 (470)
Q Consensus 220 l~~~l~------~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
+++.+. .++.++++...+.-.|. +.|++.++++.++|++| |+++|.||++..+...| .++.+.. .+-
T Consensus 209 ~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~-gillI~DEVQtG~GRTG----~~fa~E~-~gv 282 (447)
T COG0160 209 IERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH-GILLIADEVQTGFGRTG----KMFAFEH-FGV 282 (447)
T ss_pred HHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccc----cchhhhh-cCC
Confidence 555442 24667777777887886 67888999999999999 99999999999976554 3333322 122
Q ss_pred eEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 012124 293 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 372 (470)
Q Consensus 293 ~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (470)
.--|-++||.+| .|+++|.+++.+++.+ ...-....+++.|+++..++.+.|+.- + -+.+.++.++.-+++.+
T Consensus 283 ~PDivt~aK~ig-~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vi---e--~e~L~~~a~~~G~~l~~ 355 (447)
T COG0160 283 EPDIVTLAKSLG-GGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVI---E--EENLLERAAELGEYLRD 355 (447)
T ss_pred CCCEEEeccccc-CCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHH---H--HccHHHHHHHHHHHHHH
Confidence 222556899998 7999999999999988 544445566889999999999888731 1 11334444444444444
Q ss_pred Hhcc----CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012124 373 SFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 446 (470)
Q Consensus 373 ~L~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~ 446 (470)
.|.+ .| +--....-|+++.+++-+....... ..+....++.+++++ |+.+..+..+ .+.|||.... +
T Consensus 356 ~L~~l~~~~~-~IgdVRG~Glm~giE~v~d~~t~~p---~~~~~~~i~~~~~~~-Glil~~~G~~--~nviRi~PPL~is 428 (447)
T COG0160 356 RLEELQEKHP-LIGDVRGLGLMIGVELVKDRDTKEP---DAELAAKIVARAFER-GLLLLTCGPH--GNVLRILPPLTIS 428 (447)
T ss_pred HHHHHHhhcC-ceecccccceEEEEEEecCCCCCCC---CHHHHHHHHHHHHHc-CCEEeccCCC--CcEEEEeCCcccC
Confidence 4443 32 1111123367788777542100000 001346777777766 8877765433 4789998765 9
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012124 447 LTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~~ 464 (470)
+++++++++.|+++++++
T Consensus 429 ~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 429 DEELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 270
>PRK07046 aminotransferase; Validated
Probab=99.81 E-value=6.3e-17 Score=162.31 Aligned_cols=340 Identities=16% Similarity=0.129 Sum_probs=209.7
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.-. +.. ++.+.+++.+++.+......+ .+....+++.+.+..+ .+.+.+++++++|..
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~----~~~~~~lAe~l~~~~~----~~~v~F~nSGtEA~e 144 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLP----SEDAAWVGEELARRFG----LPYWQVATTATDANR 144 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCC----CHHHHHHHHHHHHHhC----CCEEEEECCHHHHHH
Confidence 67889999877633 333 789999999999875322212 3555666666665432 478999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHH-H-cCCE-----------------EEEecCcCCCCCccCHHhHhhhcc-C
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMAR-I-ADAT-----------------PVILPTRISENFLLDPKVLESKLT-E 226 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~-~-~g~~-----------------~~~v~~~~~~~~~~d~~~l~~~l~-~ 226 (470)
.+++... ...++|+...-+|+++.+... . .+.+ +..+| | -|++.+++.+. +
T Consensus 145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-nd~~~l~~~l~~~ 217 (453)
T PRK07046 145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------F-NDLAALEAALADG 217 (453)
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------C-CCHHHHHHHhCCC
Confidence 9888642 223678888889999753221 1 1100 11111 1 17899998885 3
Q ss_pred CceEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 227 KSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
++.+|++...+...| ...+.+.++++.++|++| |+++|.||+.. |..+-........+.++ +-+|+|.+|
T Consensus 218 ~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~-g~llI~DEV~t-fr~g~Gg~~~~~gv~PD------i~t~gK~lg- 288 (453)
T PRK07046 218 DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRY-GTLLVIDETHT-ISSGPGGYTRAHGLEPD------FLVVGKPIA- 288 (453)
T ss_pred CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEcccc-CccCCcchhHHhCCCcc------ceeehhhhc-
Confidence 566666644444345 456778999999999999 99999999987 44322111111222221 346899998
Q ss_pred ccceeeEEEcCHHHHHHHHHH---------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 012124 306 TGWRLGYIAGPKHFVAACNKI---------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 376 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 376 (470)
.|+++|.+++++++.+.+... ....+++.+++...++.+.|+.-.. ++.+++..+.-+..++.|.+.+.+
T Consensus 289 gG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~ 367 (453)
T PRK07046 289 GGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT-EAAYAHMLALAARLAAGLRAVIAR 367 (453)
T ss_pred CCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999887532 1223667899998888888763211 233444433333334444444444
Q ss_pred CCCC--eecCCCceEEEeeeccC-ccCCcccCCC--CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHH
Q 012124 377 LEGV--KMSEPQGAFYLFIDFST-YYGSEAEGFG--KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQ 451 (470)
Q Consensus 377 ~~g~--~~~~~~~g~~~~~~~~~-~~~~~~~~~~--~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~ 451 (470)
. ++ .+.. .+.+ +.+.+.+ .......... ...-...++..++++ ||.+.|. .+.++++...++++|+
T Consensus 368 ~-~~~~~v~g-~G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-----~~~~~~~p~~t~~did 438 (453)
T PRK07046 368 H-GLPWHVTR-VGAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITPF-----HNMMLVCPATTAADVD 438 (453)
T ss_pred C-CCCeEEEE-eCcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEecc-----cCcEEEeCCCCHHHHH
Confidence 4 32 2322 2222 3333311 1000000000 000123456666665 9998773 2467888888999999
Q ss_pred HHHHHHHHHHHhhC
Q 012124 452 AAVERIKKGLLTLR 465 (470)
Q Consensus 452 ~~l~~l~~~l~~~~ 465 (470)
++++++.++++++.
T Consensus 439 ~~~~~~~~~l~~~~ 452 (453)
T PRK07046 439 RLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998754
No 271
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.81 E-value=4.8e-17 Score=163.36 Aligned_cols=340 Identities=12% Similarity=0.137 Sum_probs=209.3
Q ss_pred hcCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 91 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
.+|+.+||+..|... +.. ++.+.+++.+++.+... +.. ..++...+++.+.+..+ ..+.+.+++++++|.
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~-~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~ 168 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS-FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEAC 168 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC-CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHH
Confidence 368889999888643 333 78999999999986442 322 23566677777765433 247999999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHH-c--CC-----------------EEEEecCcCCCCCccCHHhHhhhcc
Q 012124 168 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-A--DA-----------------TPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 168 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~--g~-----------------~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
+.+++... ...++|+...-+|+++...+.. . |. .++.+|. -|++.+++.+.
T Consensus 169 e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~ 241 (474)
T PLN02482 169 MGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFE 241 (474)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHH
Confidence 99888643 1236788888899997643211 0 10 0111111 17888888874
Q ss_pred ---CCceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCc
Q 012124 226 ---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 301 (470)
Q Consensus 226 ---~~~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK 301 (470)
+++.+|++...+...|... +++.+++|.++|++| |+++|.||++..|..+.........+.+ | +.+|+|
T Consensus 242 ~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~-g~lLI~DEV~tGfR~g~~ga~~~~gv~P--D----i~t~gK 314 (474)
T PLN02482 242 ANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKEN-GALLVFDEVMTGFRIAYGGAQEYFGITP--D----LTTLGK 314 (474)
T ss_pred hCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCeecCcchHhHHhCCCC--C----EEEecc
Confidence 3455666655566677655 578999999999999 9999999999877433211111112222 2 457899
Q ss_pred ccccccceeeEEEcCHHHHHHHHHH---hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC-
Q 012124 302 AFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL- 377 (470)
Q Consensus 302 ~~~~~G~r~G~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 377 (470)
.+| .|+++|.+++++++++.+... ....+++.+++...++.+.|+.-.. + ...++.+++-+.+.+.|+++
T Consensus 315 ~lg-gG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~----~~~~~~~~~g~~l~~~L~~l~ 388 (474)
T PLN02482 315 VIG-GGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-P----GTYEYLDKITKKLIQGILEAG 388 (474)
T ss_pred hhh-CCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-c----CHHHHHHHHHHHHHHHHHHHH
Confidence 998 899999999999999887531 2234556788888888777764211 2 23334444444444444432
Q ss_pred --CCCeec-CCCceEEEeeeccC-ccCC-cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHH
Q 012124 378 --EGVKMS-EPQGAFYLFIDFST-YYGS-EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQA 452 (470)
Q Consensus 378 --~g~~~~-~~~~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~ 452 (470)
-|+.+. ...++++ .+.+.. .... ......+......+.+.|+++ ||.+.|... +.+ -+++..++++|++
T Consensus 389 ~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~~---~~~-~psl~ht~~dId~ 462 (474)
T PLN02482 389 KKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQF---EAG-FTSLAHTEEDIDF 462 (474)
T ss_pred HhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccCC---CCC-cCCCCCCHHHHHH
Confidence 033332 2334443 222211 0000 000000000134677777765 999987321 111 1677779999999
Q ss_pred HHHHHHHHHHh
Q 012124 453 AVERIKKGLLT 463 (470)
Q Consensus 453 ~l~~l~~~l~~ 463 (470)
+++++++++++
T Consensus 463 ~l~al~~~l~~ 473 (474)
T PLN02482 463 TIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 272
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.80 E-value=2.3e-17 Score=160.57 Aligned_cols=320 Identities=13% Similarity=0.087 Sum_probs=211.4
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|. ..+.. ++.+.+++.+++.+..+ +.+ .-..+.+..+++.+.+..+ .+.+++++++++|++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~~~~SGseA~e 95 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVV-AGP-MFEHEEKEEMLEELSKWVN----YEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCC-ccC-CcCCHHHHHHHHHHHhhcC----CCEEEEeCchHHHHH
Confidence 577889998875 33333 68888999999876321 111 1123445555666654333 358999999999999
Q ss_pred HHHHHhc-CCC-CeEEEcCCCCCChHHHHHHc--------CCE-----EEEecCcCCCCCccCHHhHhhhccCCceEEEE
Q 012124 169 QAVLAVC-SPG-DEVIIPAPFWVSYPEMARIA--------DAT-----PVILPTRISENFLLDPKVLESKLTEKSRLLIL 233 (470)
Q Consensus 169 ~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~--------g~~-----~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l 233 (470)
.+++... .+| ++|+..+.+|++....+... +.. +..+|. .|++.+++.+.+++++|++
T Consensus 96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~~aAviv 168 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITKETAAVIF 168 (364)
T ss_pred HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcCCcEEEEE
Confidence 9998753 345 89999999999876443321 111 111221 2678899988888888888
Q ss_pred cCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE
Q 012124 234 CSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 312 (470)
Q Consensus 234 ~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~ 312 (470)
...+...|. ..+++.+++|.++|++| |+++|+||++..+..+.........+.++ +-+|+|.++ .|+++|.
T Consensus 169 Epi~g~gG~~~~~~~yl~~lr~lc~~~-gillI~DEv~tG~RtG~~~a~~~~gv~PD------iv~~gK~lg-gG~P~~a 240 (364)
T PRK04013 169 EPIQGEGGIVPAKEEFVKTLRDLTEDV-GALLIADEVQSGLRTGKFLAIEHYKVEPD------IVTMGKGIG-NGVPVSL 240 (364)
T ss_pred cCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcCCCCchhHHHhcCCCCC------EEEeccccc-CCceeEE
Confidence 766665665 55788999999999999 99999999999873321111112233332 455799998 8999999
Q ss_pred EEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEe
Q 012124 313 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 392 (470)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~ 392 (470)
++.+.++. ......+++.++++..++.+.|+.-.. ++.+++.++. + ..+.. +-+.- ...-|+++-
T Consensus 241 ~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~-~~l~~~~~~~-------l-~~l~~-~~v~~-vRG~Gl~~g 305 (364)
T PRK04013 241 TLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRR-ERLVEKAGEK-------F-IEIKG-ERVVT-TRGRGLMIG 305 (364)
T ss_pred EEeccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHH-------H-HHhcc-Cccee-eeeCcEEEE
Confidence 99877652 223446778899999888888764211 2223333322 2 12221 21111 123367777
Q ss_pred eeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 393 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+++.+ +...+.+.++++ |+.+.+.. .+.+|+.... +++++++++++|+++++++.
T Consensus 306 ve~~~-------------~~~~i~~~~~~~-Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 306 IVLKK-------------PVGKYVEELQNR-GYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred EEeCC-------------cHHHHHHHHHhC-CcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 78753 345677777765 89887632 3679998775 99999999999999998754
No 273
>PRK07482 hypothetical protein; Provisional
Probab=99.80 E-value=1.1e-16 Score=161.31 Aligned_cols=356 Identities=12% Similarity=0.036 Sum_probs=213.8
Q ss_pred cCCCeEEccCCCCCC--CC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPDF--DT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~--~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.... .. ++.+.+++.+++.+.........-..+.+..+++.+.+..+ ...+.+++++++++|++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSEAve 125 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSDANE 125 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHH
Confidence 677899999886433 32 78999999999876321110011224666777777765432 23468999999999999
Q ss_pred HHHHHhc------C-C-CCeEEEcCCCCCChHHHHHHcCC-------------EEEEecCcCCCCC-----------ccC
Q 012124 169 QAVLAVC------S-P-GDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENF-----------LLD 216 (470)
Q Consensus 169 ~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------~~d 216 (470)
.+++... . + ..+|+...-+|++.......... .+..++....... .-+
T Consensus 126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (461)
T PRK07482 126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC 205 (461)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence 9998753 1 2 25788888999986543222111 1112221110000 013
Q ss_pred HHhHhhhcc----CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCC
Q 012124 217 PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 290 (470)
Q Consensus 217 ~~~l~~~l~----~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~ 290 (470)
++.+++.+. +++.+|++...+.-.|.. .+++.+++|.++|++| |+++|.||++..|...+... .....+.++
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~~a~~~~gv~PD- 283 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY-DILLIADEVVTGFGRLGSMFGSDHYGIEPD- 283 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCcchhhHHhcCCCCC-
Confidence 567777773 346667765556556765 6788999999999999 99999999999873333211 111122222
Q ss_pred CceEEEeccCcccccccc-eeeEEEcCHHHHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
+-+++|.++ .|+ ++|.+++.+++.+.+... ....+++.++++..++.+.|+.-.. ++.+++.++.
T Consensus 284 -----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~-~~l~~~~~~~ 356 (461)
T PRK07482 284 -----LITVAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER-ENLVGNAAEV 356 (461)
T ss_pred -----EEEEccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 344789998 885 999999999988777521 2335677899999888888764111 2223333222
Q ss_pred HHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCC-CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012124 363 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI-ENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 441 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRl 441 (470)
=...++.+.+.+.+.+-+ .....-|+++.+++.+.... ...+... .....++..++++ ||.+.++. ..+.+|+
T Consensus 357 g~~l~~~L~~l~~~~~~v-~~vrG~Glm~giel~~~~~~-~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~~---~~~~i~~ 430 (461)
T PRK07482 357 GAYFRARLRAAFGDHPLV-GEVRGVGMLAAVEFVADRDD-RTPFDPALKIGPQVSAAALER-GVIARAMP---HGDILGF 430 (461)
T ss_pred HHHHHHHHHHHHhcCCCE-EEEeeceeEEEEEeccCCCc-CCCCChhhHHHHHHHHHHHHC-CcEEecCC---CCCEEEE
Confidence 222233333333334322 22224466666777431000 0000000 0124577777765 89886531 1357888
Q ss_pred Eee--cCHHHHHHHHHHHHHHHHhh
Q 012124 442 SYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 442 s~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
... .+++++++++++|+++++++
T Consensus 431 ~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 431 APPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 744 49999999999999998765
No 274
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=4.3e-17 Score=145.34 Aligned_cols=330 Identities=18% Similarity=0.241 Sum_probs=228.3
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 175 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~ 175 (470)
.+||.+..-.. |..++++++.++.. +..-|+.......|.+.+|+... ...-+++++|++..+..+...+-
T Consensus 23 ~vDLRSDTvT~-PTdeMr~am~eA~v-gDdVyGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNllaIm~Hc~ 93 (384)
T KOG1368|consen 23 SVDLRSDTVTV-PTDEMRRAMAEASV-GDDVYGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLAIMVHCH 93 (384)
T ss_pred ccccccccccC-ChHHHHHHHhhccc-CcccccCCccHHHHHHHHHHHhC-------ccceeeecccccccHHHHHHHhc
Confidence 36666655443 34678888877654 34557777777889999888864 33468888888887776666666
Q ss_pred CCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCcCCCCCccCHHhHhhhccC--------CceEEEEcCCCCCcc-cC
Q 012124 176 SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--------KSRLLILCSPSNPTG-SV 243 (470)
Q Consensus 176 ~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~--------~~~~i~l~~p~nPtG-~~ 243 (470)
++|.+|++.+-++...+. +....|+.+.++... ++..+|++++++++.. .+++|++.+.||-+| .+
T Consensus 94 ~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~v 171 (384)
T KOG1368|consen 94 QRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKV 171 (384)
T ss_pred CCCceEEeccchheeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceE
Confidence 799999999988764442 456678887777764 4445999999999962 588999977765555 99
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeE-EEcCHHHHHH
Q 012124 244 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVAA 322 (470)
Q Consensus 244 ~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~-~~~~~~~~~~ 322 (470)
+|.|++.++.+||++| ++.+..|.+--.-.- -....++..+....+.|=. .|||.+|. ++|- ++++.+++++
T Consensus 172 lPle~~~~v~~lak~~-glkLH~DGARi~NAa-vasgV~vk~i~~~fDSVsi--CLSKglgA---PVGSViVG~k~FI~k 244 (384)
T KOG1368|consen 172 LPLEELDRVKALAKRH-GLKLHMDGARIFNAA-VASGVPVKKICSAFDSVSI--CLSKGLGA---PVGSVIVGSKDFIDK 244 (384)
T ss_pred eeHHHHHHHHHHHhcc-CCeeecchhhhhhHH-HHcCCCHHHHHHhhhhhhh--hhhccCCC---CcccEEEccHHHHHH
Confidence 9999999999999999 999999987321000 0111333333322233322 38899873 3565 5689999999
Q ss_pred HHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC--CceEEEeeeccCccC
Q 012124 323 CNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFYLFIDFSTYYG 400 (470)
Q Consensus 323 l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~g~~~~~~~~~~~~ 400 (470)
.+..+.....+.-..+..++++.... ++-...++ .-.++...+.+.++..+++++..| +.++ +.+.+-..
T Consensus 245 A~~~RKalGGGmRQsGvLaaaaLval----~~~~~~L~-~dHk~A~~lAe~~~~~~~i~v~v~a~etNi-v~~~l~q~-- 316 (384)
T KOG1368|consen 245 ARHFRKALGGGMRQSGVLAAAALVAL----DENVPLLR-ADHKRAKELAEYINTPEEIRVEVPAVETNI-VNMVLCQA-- 316 (384)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHh----hcchHHHH-HHHHHHHHHHHHhccccceeeecchhhcce-eeeecccc--
Confidence 99888888888877777777766653 22233333 234566667777777756766544 4454 45444221
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHH-HHHHHhh
Q 012124 401 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERI-KKGLLTL 464 (470)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l-~~~l~~~ 464 (470)
..+.++++..+. ++||.+.+|..+ .+|+.+.+ ++++++..+..+ +.++.++
T Consensus 317 --------~~~~~~l~~~~~-k~gi~lm~~~s~----r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 317 --------RLTAEELCKFLE-KNGILLMGGASR----RIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred --------cCCHHHHHHHHH-HCCeEEeecccc----ceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 027889998875 569999997654 59999997 899999999999 5555543
No 275
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.3e-17 Score=162.12 Aligned_cols=213 Identities=11% Similarity=0.098 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCcC
Q 012124 134 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRI 209 (470)
Q Consensus 134 ~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~ 209 (470)
..|.+.++++. | .+..+++++++.|+..++.+++++||+|++....|.+.... +...|++++.++ +.
T Consensus 72 ~~Le~~lA~l~----g----~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~ 142 (436)
T PRK07812 72 DVVEQRIAALE----G----GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP 142 (436)
T ss_pred HHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC
Confidence 45566666553 4 24578888888899999999999999999999888876643 344788877775 21
Q ss_pred CCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC
Q 012124 210 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 289 (470)
Q Consensus 210 ~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~ 289 (470)
.|++.+++++++++++|++.+|+||+|.+.+ +++|.++|+++ |+++|+|+++..-.. ..++ .
T Consensus 143 -----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~-gi~liVD~t~a~~~~----~~pl---~-- 204 (436)
T PRK07812 143 -----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEA-GVPLIVDNTIATPYL----IRPL---E-- 204 (436)
T ss_pred -----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCccccc----CCch---h--
Confidence 3899999999999999999999999999999 88899999999 999999998864111 1111 1
Q ss_pred CCceEEEeccCcccccccceeeEEEcCHH-------------------------------HH-HHHHHHhhhccCCCChH
Q 012124 290 WERTLTVNGFSKAFAMTGWRLGYIAGPKH-------------------------------FV-AACNKIQSQFTSGASSI 337 (470)
Q Consensus 290 ~~~~i~i~S~sK~~~~~G~r~G~~~~~~~-------------------------------~~-~~l~~~~~~~~~~~~~~ 337 (470)
.+-.+++.|++|.+|..|--+|.++.... ++ +...........+.+++
T Consensus 205 ~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~ 284 (436)
T PRK07812 205 HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPF 284 (436)
T ss_pred cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHH
Confidence 24458889999999756655666655311 01 11112223344555665
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 338 SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 338 ~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
....+..-| +-+..+.++..++...+.+.|++.|++
T Consensus 285 ~a~l~~rgl-------~tL~~R~~~~~~nA~~la~~L~~~p~v 320 (436)
T PRK07812 285 NAFLIAQGL-------ETLSLRIERHVANAQRVAEFLEARDEV 320 (436)
T ss_pred HHHHHhcCc-------CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 433322222 224445555567777788888877665
No 276
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.2e-17 Score=146.85 Aligned_cols=373 Identities=16% Similarity=0.132 Sum_probs=233.9
Q ss_pred ccccccccchhhhhhcCCCcccccccCccccccccCCchHHHHHHHHHHHHhcCCCeEEccCCC-CCCCChHHHHHHHHH
Q 012124 40 NFNLNNDRRVLRVMACSGVEEVQVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE-PDFDTPVLIAEAGIN 118 (470)
Q Consensus 40 Ay~~L~~~G~i~s~~g~sG~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~a~~~ 118 (470)
|+.+-.-++=++...| .|||=+.+.-.+.....++-. -..+++++|+.++ ..+..+|++.++-.+
T Consensus 27 ~q~r~~l~~~legi~g-agtwk~erVi~s~q~p~i~v~-------------G~~k~ilnFcaNnYLGLsshPeii~a~~~ 92 (417)
T KOG1359|consen 27 AQLRAILGDELEGIKG-AGTWKRERVITSRQGPTIQVK-------------GSDKKILNFCANNYLGLSSHPEIINAGQK 92 (417)
T ss_pred HHHHHhccCccceecc-cccceeeeEEeecccceEEEe-------------ccccceeeecccccccccCChHHHHHHHH
Confidence 4444444555677778 899876543222222111100 1223678888776 556668999999999
Q ss_pred HHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH
Q 012124 119 AIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA 195 (470)
Q Consensus 119 ~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~ 195 (470)
++.+. ...-.-..|+....+.+...+.+..+ .|+.++.+..-.|...++.+++.|.|.|+-+.-.+.+..+-+
T Consensus 93 aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~----rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi 168 (417)
T KOG1359|consen 93 ALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG----REDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI 168 (417)
T ss_pred HHHHhCCCccceeEEecchHHHHHHHHHHHHHhC----CCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh
Confidence 98762 11111234555555555555544333 345556666666777788888999999999988888888877
Q ss_pred HHcCCEEEEecCcCCCCCccCHHhHhhhcc----CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEecccc
Q 012124 196 RIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 271 (470)
Q Consensus 196 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~ 271 (470)
+.+. + + . .+|+-.++..+. .+-|+|+....-...|...| +++|.+++++| |+++++||+++
T Consensus 169 rLck-r---y-----~--h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP---l~ei~~La~kY-gaLlfiDecHa 233 (417)
T KOG1359|consen 169 RLCK-R---Y-----R--HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP---LEEISQLAKKY-GALLFIDECHA 233 (417)
T ss_pred HHHh-h---h-----c--cchhHHHHHHHHHhhhheEEEEEecceeccCCCccc---HHHHHHHHHhc-CcEEEEeeccc
Confidence 7765 1 1 1 156666655443 34555555555778999999 88889999999 99999999999
Q ss_pred ccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChH--HHHHHHHHHhcC
Q 012124 272 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSI--SQKAGVAALGLG 349 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~--~q~a~~~~l~~~ 349 (470)
.+.++..+...-..+..+.+..|..++++|.+| |.--||..+|++++.-++...+++-++.+-+ ..-.+.++++.
T Consensus 234 Tgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dl- 310 (417)
T KOG1359|consen 234 TGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDL- 310 (417)
T ss_pred ceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHH-
Confidence 887775544444444444577789999999985 3344999999999999987766554433221 22222222221
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012124 350 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 429 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p 429 (470)
--.-.......+.+.+++.+..+.- |+++......+ .-+-+.+. ..+..+++.|+++ ||.|..
T Consensus 311 ---lm~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI-~pv~lGda-----------~lA~~~ad~lLk~-Gi~Vig 373 (417)
T KOG1359|consen 311 ---LMVSSKEIQSRQANTQRFREFMEAA-GFTISGASHPI-CPVMLGDA-----------RLASKMADELLKR-GIYVIG 373 (417)
T ss_pred ---HHhhHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCc-cceecccH-----------HHHHHHHHHHHhc-CceEEe
Confidence 1111223333344555555555443 88776533222 22233322 1567888899987 898865
Q ss_pred CCCCC-CC--CcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 430 GDAFG-DD--TCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 430 g~~f~-~~--~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
-++.- ++ ..+|+.++. ++++|++.++++.++.+.+.
T Consensus 374 fs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 374 FSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred ecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 33222 22 367777765 99999999999999877543
No 277
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.80 E-value=4.8e-17 Score=160.60 Aligned_cols=316 Identities=12% Similarity=0.037 Sum_probs=203.7
Q ss_pred ChHH-HHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEec-ChHHHHHHHHHHhcCC-CCeEEEc
Q 012124 108 TPVL-IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSILQAVLAVCSP-GDEVIIP 184 (470)
Q Consensus 108 ~~~~-~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~-g~~~al~~~~~~l~~~-gd~Vlv~ 184 (470)
+++. +++++.+...... +.++ -..++-+.+.+.+.+.+|.+ ++++|++++ +++.+++.++..++++ ++.|++
T Consensus 23 ~~~~~v~~a~~~~~~~~~-hr~~--~f~~~~~~~r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~- 97 (378)
T PRK03080 23 KRPGWQLEALADALLGRS-HRQK--PVKALLKRVIEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA- 97 (378)
T ss_pred CChHHHHHHHHhhhcccC-cCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhcCCCCcceEEE-
Confidence 4555 8888775533211 1211 23445555555555556642 445788875 8999999999999875 455554
Q ss_pred CCCCCCh-HH-HHHHcCC-EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012124 185 APFWVSY-PE-MARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261 (470)
Q Consensus 185 ~p~y~~~-~~-~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~ 261 (470)
.-.|..- .. +.+..|. +++.++.+ .+..+|++.++. ++.|.+++.+|.||..+| +++|++ +++ |
T Consensus 98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~p---i~~I~~--~~~-g 164 (378)
T PRK03080 98 WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVRVP---VARWIG--ADR-E 164 (378)
T ss_pred eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCccceecc---chhhcc--ccC-C
Confidence 3344332 22 2356788 88888875 334477776442 566888889999999999 777777 788 9
Q ss_pred EEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh--------------
Q 012124 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------- 327 (470)
Q Consensus 262 ~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~-------------- 327 (470)
+++|+|.+.+.. ..+..+.. -.+++.|..|.++ +...+|+++..++.++.+....
T Consensus 165 ~~~vVDa~qs~G----~~pidv~~------iD~~~~s~~K~l~-~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~ 233 (378)
T PRK03080 165 GLTICDATSAAF----ALPLDWSK------LDVYTFSWQKVLG-GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKG 233 (378)
T ss_pred CeEEEecccccc----cCCCCHHH------CcEEEEehhhhCC-CCCceEEEEECHHHHHhhhcccCCCCCchhheeccc
Confidence 999999998752 22233332 2488999999985 3234899999998887764311
Q ss_pred --------hhccCC-CChHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCCeecC--C--CceEEEee
Q 012124 328 --------SQFTSG-ASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYLFI 393 (470)
Q Consensus 328 --------~~~~~~-~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~--~~g~~~~~ 393 (470)
...+.+ ++.....++.++|+.- .+. .++.+.++.+++.+++.+.|++++++.+.. + .++..+.+
T Consensus 234 ~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~ 311 (378)
T PRK03080 234 GKAIENSFKGQTINTPSMLTVEDYLDQLDWA--NSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTL 311 (378)
T ss_pred hHHhhhhhcCCcccCchHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEE
Confidence 011112 2333333334444431 022 367788888889999999999886665542 1 23333555
Q ss_pred eccC---ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012124 394 DFST---YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 467 (470)
Q Consensus 394 ~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~~~ 467 (470)
.+|+ . ...++...|+++ ||.+..|......+.+|+|+.. ++++++.+++.|++++++++..
T Consensus 312 ~~~~~~~~------------~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~~ 377 (378)
T PRK03080 312 DFVDAQAA------------VDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKAA 377 (378)
T ss_pred EcCCchHH------------HHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 6664 2 233466677766 7888776432235789999886 8999999999999999888753
No 278
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=1.5e-16 Score=159.24 Aligned_cols=346 Identities=15% Similarity=0.179 Sum_probs=210.6
Q ss_pred hcCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 91 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
.+|+.+||+..|... +.. +|.+.+++.+++.+......+ .+....+++.+.+..+ ..+.+++++++++|.
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~ 122 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTP----TELEIEFAKMLKEAIP---SLEKVRFVNSGTEAV 122 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCC----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHHHH
Confidence 367889999888643 333 788999999998764322212 2445666666654332 246899999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCCEEEE--------ecCc-CCCC---CccCHHhHhhhcc---CCce
Q 012124 168 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADATPVI--------LPTR-ISEN---FLLDPKVLESKLT---EKSR 229 (470)
Q Consensus 168 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~--------v~~~-~~~~---~~~d~~~l~~~l~---~~~~ 229 (470)
+.+++... .....|+...-+|++....+.. .|..... ++.. ..+- ...|++.+++.+. +++.
T Consensus 123 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~va 202 (428)
T PRK12389 123 MTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVA 202 (428)
T ss_pred HHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEE
Confidence 99988643 2236788888899987654332 2211110 0000 0000 0026788888774 3566
Q ss_pred EEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccc
Q 012124 230 LLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 230 ~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
+|++...+...|.. .+.+.+++|.++|++| |+++|.||++..|............+.+ | +-+|+|.++ .|+
T Consensus 203 avi~EPv~g~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~Rt~~~~a~~~~gv~P--D----ivt~gK~lg-gG~ 274 (428)
T PRK12389 203 AVLVEPIVGNFGIVEPKPGFLEAVNELAHEA-GALVIYDEVITAFRFMYGGAQDLLGVEP--D----LTALGKIIG-GGL 274 (428)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCcchhhHHhCCCC--C----eeeechhhc-CCC
Confidence 66665556667764 5788999999999999 9999999999987432110011112222 2 457899998 899
Q ss_pred eeeEEEcCHHHHHHHHH---HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----CCC-C
Q 012124 309 RLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEG-V 380 (470)
Q Consensus 309 r~G~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g-~ 380 (470)
++|.+++++++++.+.. .....+++.+++...++.+.|+.-.. ++ +.++.++.-+++.+.|++ .+- .
T Consensus 275 Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~~----l~~~~~~~g~~l~~~L~~l~~~~~~~~ 349 (428)
T PRK12389 275 PIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-EG----VYEKLDRLGAMLEEGILEAAEKHGITI 349 (428)
T ss_pred ceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-cc----HHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 99999999999888742 12334667899998888888874211 22 333334444444444433 321 1
Q ss_pred eecCCCceEEEeeeccCccCCcccCCC--CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHH
Q 012124 381 KMSEPQGAFYLFIDFSTYYGSEAEGFG--KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIK 458 (470)
Q Consensus 381 ~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~ 458 (470)
.+.. ..|++ .+.+............ .......+.+.|.++ ||.+.+.. .+.+.+++..+++++++++++++
T Consensus 350 ~v~r-~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~----~~~~~~~l~~t~e~id~~~~~l~ 422 (428)
T PRK12389 350 TINR-LKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSK----YEAWFLTTAHTEEDIEETLEAVD 422 (428)
T ss_pred EEEe-cCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCC----CCCeeecCCCCHHHHHHHHHHHH
Confidence 2222 23342 3333211000000000 000134667777665 99998742 23456777779999999999999
Q ss_pred HHHHh
Q 012124 459 KGLLT 463 (470)
Q Consensus 459 ~~l~~ 463 (470)
+++++
T Consensus 423 ~~l~~ 427 (428)
T PRK12389 423 RAFAQ 427 (428)
T ss_pred HHHHh
Confidence 99875
No 279
>PRK07678 aminotransferase; Validated
Probab=99.80 E-value=1.3e-16 Score=160.44 Aligned_cols=355 Identities=15% Similarity=0.111 Sum_probs=213.6
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+... + ...-..+....+++.+.+..+ ..+.+++++++++|.+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~-~~~~~~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e 119 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY-F-PLTQSHEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANE 119 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc-c-ccccCCHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHH
Confidence 67789999887532 333 78899999998875321 1 111123445566666665443 2358999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCCCC--Cc-----cC---H
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISEN--FL-----LD---P 217 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~--~~-----~d---~ 217 (470)
.+++.... +| .+|+...-+|++....+... |. .+..+|...... +. -| +
T Consensus 120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECV 199 (451)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHH
Confidence 98886421 23 57888889999876543321 11 112222211000 00 01 2
Q ss_pred HhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc--cccCCCC
Q 012124 218 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF--ASLPGMW 290 (470)
Q Consensus 218 ~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~--~~~~~~~ 290 (470)
+.+++.+. +++.+|++...+.-.|. ..+++.++++.++|++| |+++|.||++..|...+. .... ..+.++
T Consensus 200 ~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~-~~~~~~~gv~PD- 276 (451)
T PRK07678 200 KEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH-GALLISDEVICGFGRTGK-AFGFMNYGVKPD- 276 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhcCCcCch-hHHHHhcCCCCC-
Confidence 23455553 35667777555544565 46888999999999999 999999999988643332 1111 122222
Q ss_pred CceEEEeccCccccccc-ceeeEEEcCHHHHHHHHH------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
+-+|+|.++ .| +++|.+++++++.+.+.. .....+++.+++...++.+.|+.-.. +..+++.++.-
T Consensus 277 -----ivt~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~-~~~~~~~~~~g 349 (451)
T PRK07678 277 -----IITMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN-ENLIERSAQLG 349 (451)
T ss_pred -----EEEeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHH
Confidence 446899998 77 699999999999887753 12346778899999988888874211 22233333333
Q ss_pred HHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--CCCCcEEE
Q 012124 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRI 441 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f--~~~~~iRl 441 (470)
+..++.|.+.+.+.+ +......-|+++.+.+.+....... ........++..|+++ ||.+.+.... ...+.+|+
T Consensus 350 ~~l~~~l~~~~~~~~-~v~~vrg~Gl~~~i~~~~~~~~~~~--~~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl 425 (451)
T PRK07678 350 ELLLEQLKEELGEHP-LVGDIRGKGLLVGIELVNDKETKEP--ADNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTL 425 (451)
T ss_pred HHHHHHHHHHHhcCC-CEEEEEeeceEEEEEEecCCcccCc--CchHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEE
Confidence 333333434444443 2111123355555666321000000 0000235677777765 9998763221 12367999
Q ss_pred Eeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 442 SYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 442 s~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+... ++++|++++++|.+++++++
T Consensus 426 ~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 426 SPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 8775 99999999999999998764
No 280
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.80 E-value=5.8e-17 Score=173.85 Aligned_cols=340 Identities=14% Similarity=0.113 Sum_probs=212.8
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcC----CCCCCCC----cCcHHHHHHHHHHHHHHcCCCCCCC--cEEEecChHH
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYTPN----AGTLELRSAICHKLKEENGLSYTPD--QILVSNGAKQ 165 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~----~~~y~~~----~g~~~lr~~ia~~l~~~~g~~~~~~--~i~it~g~~~ 165 (470)
++.|..+.-.+.++..+.+++.+..... ...|... .-+.+.|+.+++++ |. +++ .|++|+|+++
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l----ga--~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF----NA--PPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh----CC--CccceEEEEeCChHH
Confidence 4667666555444556666665554321 1111111 12345556666554 53 444 5899999999
Q ss_pred HHHHHHHHh-cCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCcCCC------CCccCH--HhHhhhc---------
Q 012124 166 SILQAVLAV-CSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISE------NFLLDP--KVLESKL--------- 224 (470)
Q Consensus 166 al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~------~~~~d~--~~l~~~l--------- 224 (470)
++++++..+ +++||+|++..-.|++.... ++..|+++..++++.+. ...+++ +.|++.+
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~ 188 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRED 188 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccc
Confidence 999999887 68899999987777765543 34569999999886211 112333 5566553
Q ss_pred -cCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhC----CCEEEEEeccccccccCCCCcccccccCCCCCceEEEecc
Q 012124 225 -TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH----PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 299 (470)
Q Consensus 225 -~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~----~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~ 299 (470)
.++++++.++..+|-||..+|.+.++++.+.++.+ .++++++|.+++. +..+..+..+ +-.+++.|+
T Consensus 189 ~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~----~~Dfl~~S~ 260 (805)
T PLN02724 189 DGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRY----PADFVVVSF 260 (805)
T ss_pred cCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhc----CCCEEEEec
Confidence 24568888999999999999966443333332221 1367999999865 3333444443 345899999
Q ss_pred CcccccccceeeEEEcCHHHHHHHHHHh------------------------hhccCCCChHHHHHHHHHHhcCCCChH-
Q 012124 300 SKAFAMTGWRLGYIAGPKHFVAACNKIQ------------------------SQFTSGASSISQKAGVAALGLGYAGGE- 354 (470)
Q Consensus 300 sK~~~~~G~r~G~~~~~~~~~~~l~~~~------------------------~~~~~~~~~~~q~a~~~~l~~~~~~~~- 354 (470)
.|.+|.| ..+|++++.+++.+.+.... +....+++.....++.++++. ..+
T Consensus 261 HK~~GgP-~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~---l~~i 336 (805)
T PLN02724 261 YKIFGYP-TGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL---LNRL 336 (805)
T ss_pred ceeccCC-CCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH---HHHh
Confidence 9998722 34899998888776554211 111223444555555555553 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC------CCeecCCC---------ceEEEeeeccCccCCcccCCCCCCCHHHHHHHH
Q 012124 355 VVSKMVKAFRERRDFLVKSFGELE------GVKMSEPQ---------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 419 (470)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~~L~~~~------g~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 419 (470)
.++++.++.++..+++.+.|.+++ ++.++.+. ++. +.+.+...-+ ......+ +..|
T Consensus 337 g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~i-vsFnv~~~~~-------~~v~~~~-v~~l 407 (805)
T PLN02724 337 TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPI-VTFNLKRADG-------SWVGHRE-VEKL 407 (805)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCE-EEEEEEcCCC-------CEeCHHH-HHHH
Confidence 356777888888889999998875 46666532 344 3334432100 0002233 4456
Q ss_pred HHcCCEEEECCCCCCC-----------------------------------CCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 420 LDKAQVALVPGDAFGD-----------------------------------DTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 420 ~~~~gI~v~pg~~f~~-----------------------------------~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
+.++||.++.|..+.. .+.+|+||+. +.+|++.+++.|++.+-
T Consensus 408 ~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 408 ASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred HHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 6677999999876531 2679999997 89999999999999663
No 281
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.80 E-value=3.1e-17 Score=160.69 Aligned_cols=314 Identities=14% Similarity=0.140 Sum_probs=201.5
Q ss_pred CChHHHHHHHHHHHHc----CCCCCCCC---cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecC-hHHHHHHHHHHhcC--
Q 012124 107 DTPVLIAEAGINAIRE----GFTRYTPN---AGTLELRSAICHKLKEENGLSYTPDQILVSNG-AKQSILQAVLAVCS-- 176 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~----~~~~y~~~---~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g-~~~al~~~~~~l~~-- 176 (470)
..|+.+++++.+.+.+ +...|... .-..++-+.+.+.+.+.+|. -++++|++|+| ++++++.++..++.
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-~~~~~vvf~~gs~T~a~~~~~~~l~~~~ 87 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-PDNYKVLFLQGGATGQFAAVPLNLLGDK 87 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCC
Confidence 3488999999887743 11122222 11123333444444444564 25678999988 99999999999987
Q ss_pred -CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccC-HHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 177 -PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 177 -~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
+||.|++ .|....+.++++..|++++.++.+.+++++ + ++..+..+++++++|.+++..|.||..++ +
T Consensus 88 ~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--------~ 157 (355)
T cd00611 88 GTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAPDAAYVHYCSNETIHGVEFD--------E 157 (355)
T ss_pred CeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCCCCCEEEEeCCcccccEEcc--------e
Confidence 5555544 222222334678889999999875433221 3 33333446778999999999999999754 3
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHH--------
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-------- 326 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------- 326 (470)
+++.| |+++++|.+.+. +..+..+..+ + +.+.|..|.+|.+| +|++++++++.+++...
T Consensus 158 i~~~~-g~~~~VDa~qs~----g~~~idv~~~----~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T cd00611 158 VPDTG-GVPLVADMSSNI----LSRPIDVSKF----G--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYK 224 (355)
T ss_pred ecccC-CCeEEEEccccc----cCCCCCHHHh----C--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHH
Confidence 44458 999999999875 2223333322 2 45566899998665 89999999887664321
Q ss_pred ---hh-hccCCCChHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCCe-ec-CC--CceEEEeeeccC
Q 012124 327 ---QS-QFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVK-MS-EP--QGAFYLFIDFST 397 (470)
Q Consensus 327 ---~~-~~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~-~~--~~g~~~~~~~~~ 397 (470)
.. ....+++.....++.++|+.- .+. .++.+.++.++..+++++.|+++||+. .. .+ ..+..+.+.+++
T Consensus 225 ~~~~~~~~~~Tpn~~~i~~L~aal~~l--~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~ 302 (355)
T cd00611 225 THADNNSLYNTPPTFAIYMMGLVLKWL--KEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGK 302 (355)
T ss_pred HHHhcCCCCCCChHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCC
Confidence 11 112345555666666666641 123 478889999999999999999998852 21 11 233434555543
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
.. ...++...+. +.|+.+.+|.. ..+.+|+|+.. +.+|++.+++.|+++
T Consensus 303 ~~-----------l~~~~~~~~~-r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 303 EE-----------LEKEFLKEAE-AAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred hh-----------hhHHHHHHHH-HCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 10 2344444444 45888666653 34789999987 999999999999875
No 282
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=1.8e-16 Score=154.73 Aligned_cols=216 Identities=19% Similarity=0.245 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCcCC
Q 012124 135 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRIS 210 (470)
Q Consensus 135 ~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~ 210 (470)
+-++.+.+.+....| .+.++++++++.|+..++.+++++||.|++.+..|.+....++ ..|.++..++.
T Consensus 55 Pt~~~le~~la~Le~----g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~--- 127 (386)
T PF01053_consen 55 PTVRALEQRLAALEG----GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP--- 127 (386)
T ss_dssp HHHHHHHHHHHHHHT-----SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST---
T ss_pred ccHHHHHHHHHHhhc----ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc---
Confidence 444444444444333 3689999999999999999999999999999999998876654 47999988864
Q ss_pred CCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-EEEEEeccccccccCCCCcccccccCCC
Q 012124 211 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPATHTSFASLPGM 289 (470)
Q Consensus 211 ~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~-~~iI~Dd~~~~~~~~~~~~~~~~~~~~~ 289 (470)
-|++++++++++++++|++.+|.||+..+.+ +++|+++|+++ | +++|+|+++....+. .+ +.
T Consensus 128 ----~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~-g~~~~vVDnT~atp~~~----~p---L~-- 190 (386)
T PF01053_consen 128 ----TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEH-GDILVVVDNTFATPYNQ----NP---LE-- 190 (386)
T ss_dssp ----TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHT-TT-EEEEECTTTHTTTC-----G---GG--
T ss_pred ----hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHh-CCceEEeeccccceeee----cc---Cc--
Confidence 3899999999999999999999999988888 99999999999 8 999999999752111 11 21
Q ss_pred CCceEEEeccCcccc-cccceeeEEEcC--HHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 290 WERTLTVNGFSKAFA-MTGWRLGYIAGP--KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 290 ~~~~i~i~S~sK~~~-~~G~r~G~~~~~--~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
.+-.|++.|.+|.++ -...=.|.++++ .++.+.++..........++.....+..-++. +.-+.++..++
T Consensus 191 ~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-------l~~R~~~~~~n 263 (386)
T PF01053_consen 191 LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-------LPLRMERQNEN 263 (386)
T ss_dssp GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-------HHHHHHHHHHH
T ss_pred CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-------HHHHHHHHHHH
Confidence 345699999999884 222226777754 47888888777777766777765555554443 33444555667
Q ss_pred HHHHHHHhccCCCCe
Q 012124 367 RDFLVKSFGELEGVK 381 (470)
Q Consensus 367 ~~~l~~~L~~~~g~~ 381 (470)
...+.+.|++.|.++
T Consensus 264 A~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 264 AEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHhCCCCC
Confidence 777888888876653
No 283
>PRK05965 hypothetical protein; Provisional
Probab=99.79 E-value=1.4e-16 Score=160.40 Aligned_cols=354 Identities=14% Similarity=0.104 Sum_probs=214.3
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+..+......-..+.+..+++.+.+..+ -..+.+++++++++|.+
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSDAVD 121 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhHHHH
Confidence 57788999887533 332 78899999999876322110001123455567777765432 13468999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHH-cCC------------EEEEecCcC--CCCCccC--------H
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRI--SENFLLD--------P 217 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~--~~~~~~d--------~ 217 (470)
.+++.... ++ .+|+..+-+|++....... .|. .+..++... ...+.-| +
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV 201 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence 99986431 23 5788889999987643211 111 112222211 0001112 2
Q ss_pred HhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc--cccCCCC
Q 012124 218 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF--ASLPGMW 290 (470)
Q Consensus 218 ~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~--~~~~~~~ 290 (470)
+.+++.+. +++.+|++...+...|. ..|++.+++|.++|++| |+++|.||+...|...+.. ... ..+.++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfGRtG~~-~a~~~~gv~PD- 278 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL-GILFVADEVITGFGRTGPL-FACEAEGVVPD- 278 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhccCccCchh-hhHhhcCCCCC-
Confidence 56677663 35667777556666676 56889999999999999 9999999999987333321 111 122222
Q ss_pred CceEEEeccCccccccc-ceeeEEEcCHHHHHHHHH-------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
+-+++|.++ .| +++|.+++++++.+.+.. .....+++.++++..++.+.|+.-.. ++ +.+.
T Consensus 279 -----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~-~~----l~~~ 347 (459)
T PRK05965 279 -----LMTVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE-GG----LLAN 347 (459)
T ss_pred -----eEEechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh-cc----HHHH
Confidence 445789998 89 499999999999887753 12345777899998888888763110 12 2233
Q ss_pred HHHHHHHHHHHhcc---CCCCeecCCCceEEEeeeccCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012124 363 FRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTC 438 (470)
Q Consensus 363 ~~~~~~~l~~~L~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~ 438 (470)
.++.-+++.+.|++ .+.+.- ...-|+++-+++....... ..... ......+.+.++++ ||.+.+.. .+.
T Consensus 348 ~~~~g~~l~~~l~~l~~~~~v~~-vrG~Gl~~gie~~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gll~~~~g----~~~ 420 (459)
T PRK05965 348 GQKAGPRFAAGLDALRAHPLVGD-VRGRGLLGALELVADKATK-TPFDAALDPADRIFDRAYAN-GLVFRAFG----DGV 420 (459)
T ss_pred HHHHHHHHHHHHHhhccCCCEEE-EeecceEEEEEEecccccc-CCCCchhHHHHHHHHHHHhC-CeEEEecC----CcE
Confidence 33444444444443 332211 1234565666664210000 00000 00134566666655 99987631 356
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHhhCCCC
Q 012124 439 IRISYA--ASLTTLQAAVERIKKGLLTLRPGV 468 (470)
Q Consensus 439 iRls~~--~~~~~i~~~l~~l~~~l~~~~~~~ 468 (470)
+|+... .+++++++++++|.++++++....
T Consensus 421 i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~~ 452 (459)
T PRK05965 421 LGFAPALCCTEGEFDLIFERTRKTLDDVLADP 452 (459)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 888855 499999999999999998875543
No 284
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.79 E-value=1.1e-16 Score=158.74 Aligned_cols=338 Identities=13% Similarity=0.073 Sum_probs=221.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEE--EecChHHHHHHHHHHhc--------CCC
Q 012124 109 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL--VSNGAKQSILQAVLAVC--------SPG 178 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~--it~g~~~al~~~~~~l~--------~~g 178 (470)
.+.+.+.+...+.....++.......++.+.+.+++.+.+|.+...+++. +|+|+++++.+++.+.. ..|
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g 133 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAG 133 (431)
T ss_pred CHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45678888888765444443444555888888888988888641113454 48999999998876542 112
Q ss_pred -----CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHH
Q 012124 179 -----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 253 (470)
Q Consensus 179 -----d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~ 253 (470)
..|++.+-.|+++...++..|+++..+|+++ +++.+|++.|++++++++.+|+++..+|.||.+.| +++|+
T Consensus 134 ~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~I~ 209 (431)
T TIGR01788 134 KPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKALN 209 (431)
T ss_pred CCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHHHH
Confidence 3688999999999999999999999999975 34569999999999989998888999999999999 78888
Q ss_pred HHHHhCC-----CEEEEEecccccccc---CCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH--HHHHH
Q 012124 254 RIVAKHP-----RLLVLSDEIYEHIIY---APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAAC 323 (470)
Q Consensus 254 ~~~~~~~-----~~~iI~Dd~~~~~~~---~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~--~~~~l 323 (470)
++|++++ ++++++|.+|+.+.. .+.....+ . ...-.-+..|.+|.+. ....+|+++..++ +.+.+
T Consensus 210 ~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~---~-~~~~DSis~s~HK~~~-~P~g~G~l~~r~~~~l~~~~ 284 (431)
T TIGR01788 210 DALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF---R-LPRVKSINVSGHKYGL-VYPGVGWVIWRDEEALPEEL 284 (431)
T ss_pred HHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc---C-CCCceEEEECchhccC-CCCCcEEEEEeChHHcchhh
Confidence 8888872 599999999995331 11111111 1 1233456778999861 3345888887553 22322
Q ss_pred HHHhhh-------ccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC--CceEEEeee
Q 012124 324 NKIQSQ-------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFYLFID 394 (470)
Q Consensus 324 ~~~~~~-------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~g~~~~~~ 394 (470)
.....+ .+...+...-.++..++..-.++...++++.++..+..+++.+.|++.+++++..+ ..++ +.++
T Consensus 285 ~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~i-V~Fr 363 (431)
T TIGR01788 285 IFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPL-VAFK 363 (431)
T ss_pred eecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceE-EEEE
Confidence 110000 11112222111122222211113456778888888999999999999988887754 5555 4456
Q ss_pred ccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC---CCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 395 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA---FGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~---f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
++.. + ....+..++.++|.++ |+.+..-.. ....-.+|+++.. +.+.++++++.|++++.++
T Consensus 364 ~~~~-~------~~~~~~~~l~~~L~~~-G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 364 LKDD-A------DPGYTLYDLSHRLRER-GWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred eCCC-C------CCCcCHHHHHHHHHHC-CCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 5431 0 0011567888887655 886432111 1112368999874 7889999999999988754
No 285
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.79 E-value=1.8e-16 Score=155.77 Aligned_cols=305 Identities=17% Similarity=0.260 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCCC
Q 012124 110 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 188 (470)
Q Consensus 110 ~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y 188 (470)
.+..+++.+.+..+.... ...-..++.+.+++++ ...+++.+++++.||.+++.++ +++||+|+++..+|
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~ 75 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF 75 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc
Confidence 456777888887764332 1345577888888886 3468999999999999999998 58999999999999
Q ss_pred CChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEec
Q 012124 189 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 268 (470)
Q Consensus 189 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd 268 (470)
+.....+...|++++.++++++ .+.+|++.+++.+++++++|++++. -|...+ +.+|.++|+++ |++||||.
T Consensus 76 ~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d---~~~i~~~~~~~-~i~lIeD~ 147 (363)
T PF01041_consen 76 PATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHL---FGNPAD---MDAIRAIARKH-GIPLIEDA 147 (363)
T ss_dssp THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHT-T-EEEEE-
T ss_pred hHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecC---CCCccc---HHHHHHHHHHc-CCcEEEcc
Confidence 9999999999999999999864 5789999999999999999986543 444445 88999999999 99999999
Q ss_pred ccccccc-CCCCcccccccCCCCCceEEEecc--CcccccccceeeEEEcC-HHHHHHHHHHhhhc--------------
Q 012124 269 IYEHIIY-APATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF-------------- 330 (470)
Q Consensus 269 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~S~--sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~-------------- 330 (470)
+++.... .+ ..+..+ ..+.+.|| +|.+. .|- -|+++.+ +++.++++.++...
T Consensus 148 a~a~g~~~~g---~~~G~~-----gd~~~fSf~~~K~i~-~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 217 (363)
T PF01041_consen 148 AQAFGARYKG---RPVGSF-----GDIAIFSFHPTKIIT-TGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELP 217 (363)
T ss_dssp TTTTT-EETT---EETTSS-----SSEEEEESSTTSSS--SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSS
T ss_pred ccccCceeCC---EeccCC-----CCceEecCCCCCCCc-CCC-CeeEEecHHHHHHHhhhhhccCcCcccccccccccc
Confidence 9986332 22 122222 23667777 58884 443 4787764 66777777655322
Q ss_pred ---cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeec-CCC-c---eEE-EeeeccCccCC
Q 012124 331 ---TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQ-G---AFY-LFIDFSTYYGS 401 (470)
Q Consensus 331 ---~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~---g~~-~~~~~~~~~~~ 401 (470)
++..+.+....+..-|+. +++..+.-+++.+.+.+.|.+++++... .+. . .++ +.+.+++..
T Consensus 218 ~g~n~rm~~~~AAigl~QL~~-------L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~-- 288 (363)
T PF01041_consen 218 PGYNFRMSELQAAIGLAQLKR-------LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEA-- 288 (363)
T ss_dssp S--B-B-BHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCG--
T ss_pred CCcccccHHHHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccc--
Confidence 223444444444444443 4445555566777788888888776432 222 1 221 233444320
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCC--CC------C-----C-----------CcEEEEeec--CHHHHHHHHH
Q 012124 402 EAEGFGKIENSESLCRYLLDKAQVALVPGDA--FG------D-----D-----------TCIRISYAA--SLTTLQAAVE 455 (470)
Q Consensus 402 ~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~--f~------~-----~-----------~~iRls~~~--~~~~i~~~l~ 455 (470)
..+-+++.+.|.++ ||.+.+... +. . . ..|.|.+.. ++++++..++
T Consensus 289 -------~~~rd~l~~~L~~~-GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~ 360 (363)
T PF01041_consen 289 -------LADRDELVEALRAR-GIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAE 360 (363)
T ss_dssp -------CSTHHHHHHHHHHT-TBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHH
T ss_pred -------cchHHHHHHHHHHC-CCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhh
Confidence 01467888888766 999887552 10 0 0 135555554 7888888877
Q ss_pred HHH
Q 012124 456 RIK 458 (470)
Q Consensus 456 ~l~ 458 (470)
.|+
T Consensus 361 ~ir 363 (363)
T PF01041_consen 361 AIR 363 (363)
T ss_dssp HHH
T ss_pred ccC
Confidence 764
No 286
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.79 E-value=2.1e-16 Score=160.11 Aligned_cols=354 Identities=10% Similarity=0.039 Sum_probs=212.3
Q ss_pred hcCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 91 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 91 ~~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
.+|+.+||+..|. ..+.. +|.+.+++.+++.+.........+..+....+++.|.+.+. +...+.+++++++++|.
T Consensus 86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSEAN 164 (504)
T ss_pred CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHHHH
Confidence 3678899999874 33333 78999999999876322111112345666777777665432 11235799999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHH-HHcCCE------------EEEecCcCCCC----C-------cc
Q 012124 168 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMA-RIADAT------------PVILPTRISEN----F-------LL 215 (470)
Q Consensus 168 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~----~-------~~ 215 (470)
+.+++... .++ +.|+..+-+|++..... ...|.. +..++...... + ..
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 99998763 133 57888888898875432 223321 11122110000 0 00
Q ss_pred CHHhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCC
Q 012124 216 DPKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGM 289 (470)
Q Consensus 216 d~~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~ 289 (470)
..+.+++.+. +++.+|++...+.-.|. ..|++.+++|.++|++| |+++|.||++..|...+.... ....+.+
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~TGfGRtG~~~a~e~~gv~P- 322 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY-DILFIADEVICAFGRLGTMFGCDKYNIKP- 322 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEecchhhCCcccchhhHHHhcCCCC-
Confidence 1234666552 24556666555665675 45789999999999999 999999999977632222111 1111222
Q ss_pred CCceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHH
Q 012124 290 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 361 (470)
Q Consensus 290 ~~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 361 (470)
| +.+|+|.++ .| +++|.+++++++.+.+... ....+++.++++..++.+.|+.-.. + .+.+
T Consensus 323 -D----ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~-~----~l~~ 391 (504)
T PLN02760 323 -D----LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE-R----NIPE 391 (504)
T ss_pred -c----EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh-C----CHHH
Confidence 2 677899997 77 4999999999999887531 2345777899999888888864111 1 2333
Q ss_pred HHHHHHHHHHHHhccCC--CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012124 362 AFRERRDFLVKSFGELE--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 439 (470)
Q Consensus 362 ~~~~~~~~l~~~L~~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~i 439 (470)
..+++-+++.+.|+++. ++......-|+++.+++.+.............-...+.+.++++ ||.+.+.. +.+
T Consensus 392 ~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-----~~l 465 (504)
T PLN02760 392 HVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKR-GMLVRVAG-----DNI 465 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhC-CcEEEecC-----CEE
Confidence 34444444444443321 12111123356566666432100000000000134566777665 99987632 468
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhh
Q 012124 440 RISYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 440 Rls~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
|++.. .++++|++++++|+++++++
T Consensus 466 rl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 466 MMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99966 59999999999999998765
No 287
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2.9e-16 Score=157.48 Aligned_cols=347 Identities=14% Similarity=0.115 Sum_probs=213.4
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..... ...-..+....+++.+....+.. ..+.+++++++++|.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~e 129 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS-LTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTESNE 129 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc-CcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHH
Confidence 67789999988643 333 7889999999987632211 11112355667777776543211 1368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcCC--CCCc---------cCHHhHh
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRIS--ENFL---------LDPKVLE 221 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~--~~~~---------~d~~~l~ 221 (470)
.+++... ...++|+...-+|++....+... |. .+..++.... ..+. -+++.++
T Consensus 130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 9988642 22367888888999877543322 21 1223332110 0000 0123455
Q ss_pred h-hcc-----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceE
Q 012124 222 S-KLT-----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 294 (470)
Q Consensus 222 ~-~l~-----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i 294 (470)
+ .++ +++.+|++...+...|. ..+.+.+++|.++|++| |+++|.||++..+...+.. .....+.- ... +
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~tG~gr~G~~-~a~~~~gv-~pD-i 285 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY-GILLIDDEVQTGMGRTGKM-FAIEHFGV-EPD-I 285 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccce-ehhhccCC-CCC-E
Confidence 5 221 34566666545666676 45788999999999999 9999999999976443321 11112211 112 2
Q ss_pred EEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 012124 295 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 374 (470)
Q Consensus 295 ~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 374 (470)
-+|||.++ .|+++|++++++++.+.+.. ....+++.+++.+.++.+.|+. .++ ...+..+++-+++.+.|
T Consensus 286 --vt~~K~l~-~G~p~gav~~~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~L~~---l~~---~~~~~~~~~g~~l~~~L 355 (441)
T PRK05769 286 --ITLAKAIA-GGLPLGAVIGRAELMFLPPG-SHANTFGGNPVAAAAALATLEE---LEE---GLLENAQKLGEYLRKEL 355 (441)
T ss_pred --EEEccccc-CCcccEEEEEehhhhhcCCC-CCCCCCCcCHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHH
Confidence 25899998 89999999999988754321 2334566789999888888874 122 45556666666666666
Q ss_pred ccCC---CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHH
Q 012124 375 GELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTT 449 (470)
Q Consensus 375 ~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~ 449 (470)
+++. ++......-|+++.+.+.+... .. .......+.+.++++ ||.+.+.. .+.+|++... ++++
T Consensus 356 ~~l~~~~~~~~~vrg~G~~~~i~~~~~~~-~~----~~~~~~~~~~~~~~~-Gil~~~~~----~~~lr~~p~l~~t~~~ 425 (441)
T PRK05769 356 KELKEKYEFIGDVRGLGLMIGVELVKDRK-EP----DPKLRDKVLYEAFKR-GLLLLGAG----KSAIRIIPPLIITEEE 425 (441)
T ss_pred HHHHHhCCCeeeeecceEEEEEEeccCCc-cc----cHHHHHHHHHHHHhC-CcEEecCC----CCEEEEeCCCCCCHHH
Confidence 5431 2211112335556666632100 00 000134566666665 89887632 3678998776 9999
Q ss_pred HHHHHHHHHHHHHhh
Q 012124 450 LQAAVERIKKGLLTL 464 (470)
Q Consensus 450 i~~~l~~l~~~l~~~ 464 (470)
|++++++|+++++++
T Consensus 426 id~~~~~l~~~l~~~ 440 (441)
T PRK05769 426 ADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 288
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.79 E-value=1e-16 Score=159.68 Aligned_cols=351 Identities=13% Similarity=0.107 Sum_probs=208.6
Q ss_pred hcCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 91 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
.+|+.+||+..|... +.. ++.+.+++.+++.+......+ .+....+++.+.+..+ ...+.+.+++++++|.
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA~ 123 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLT----SEQEILFAEELFSYLG--LEDHKIRFVSSGTEAT 123 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCC----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence 367889999888643 333 789999999998764321112 2445556666655433 1236899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHH----HHHcCCEE----EEe--cCcCCC----CCccCHHhHhhhcc---CCc
Q 012124 168 LQAVLAVCS-PG-DEVIIPAPFWVSYPEM----ARIADATP----VIL--PTRISE----NFLLDPKVLESKLT---EKS 228 (470)
Q Consensus 168 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~----~~~~g~~~----~~v--~~~~~~----~~~~d~~~l~~~l~---~~~ 228 (470)
+.+++.... .| ..|+...-+|++.... ....+... ... +..... .+ -|++.+++.+. +++
T Consensus 124 e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~ 202 (433)
T PRK00615 124 MTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGHRV 202 (433)
T ss_pred HHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCCce
Confidence 999886531 33 5788888889886521 11111000 000 000000 01 26788888774 345
Q ss_pred eEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccc
Q 012124 229 RLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 307 (470)
Q Consensus 229 ~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 307 (470)
.+|++...+...|.. .+++.+++|.++|++| |+++|.||++..+..+.........+.+ | | -+|+|.+| .|
T Consensus 203 aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~R~G~~ga~~~~gv~P--D--i--~~~gK~lg-gG 274 (433)
T PRK00615 203 AGVIFEPICANMGVVLPKPGFIEGIIQTCRRT-GSLSIMDEVVTGFRVAQGGAAAIYHVKP--D--I--TVYGKILG-GG 274 (433)
T ss_pred EEEEECCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcccccccccHhHHHHhcCCCC--C--e--EEEccccc-CC
Confidence 566665556556764 4688999999999999 9999999999876432211111112222 2 2 35899998 88
Q ss_pred ceeeEEEcCHHHHHHHHHH---hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC--Cee
Q 012124 308 WRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--VKM 382 (470)
Q Consensus 308 ~r~G~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~ 382 (470)
+.+|++++++++++.+... ....+++.+++...++.+.|+.-.. ++.+++.++.-+..++.+.+.+.+. | +..
T Consensus 275 ~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~-~~~~~~~~~~g~~l~~~l~~~~~~~-g~~v~~ 352 (433)
T PRK00615 275 LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE-QGFYTQLSTLEQNFLSPIEEMIRSQ-GFPVSL 352 (433)
T ss_pred cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHc-CCCeEE
Confidence 9999999999999887532 1224556688888888888764211 2223333222222233333333332 3 333
Q ss_pred cCCCceEEEeeeccCccCC--cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 383 SEPQGAFYLFIDFSTYYGS--EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 383 ~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
.. .|.++.+.+.+.... .............+.+.|.++ ||.+.|...- . .=++..+++++|++.++.+.++
T Consensus 353 ~r--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~---~-~~ls~~ht~~did~~~~a~~~~ 425 (433)
T PRK00615 353 VR--YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPFE---A-SFLSSAHSMENLDYAQNVLIDS 425 (433)
T ss_pred Ee--eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCcccc---c-cceecCCCHHHHHHHHHHHHHH
Confidence 33 455566666432000 000000000134677777776 9998875321 1 1367777999999999999999
Q ss_pred HHhhC
Q 012124 461 LLTLR 465 (470)
Q Consensus 461 l~~~~ 465 (470)
++++-
T Consensus 426 ~~~~~ 430 (433)
T PRK00615 426 LEKVF 430 (433)
T ss_pred HHHHh
Confidence 98764
No 289
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=1.1e-16 Score=170.81 Aligned_cols=308 Identities=17% Similarity=0.146 Sum_probs=220.4
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH----HHHHHHHHHhcCC-CC----eEEEcCCCCCChHHHHHHcCCE
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK----QSILQAVLAVCSP-GD----EVIIPAPFWVSYPEMARIADAT 201 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~----~al~~~~~~l~~~-gd----~Vlv~~p~y~~~~~~~~~~g~~ 201 (470)
+|+.++...+.+++.+..|. ++|.++++++ +++.++++.+.++ || +|+++...|......+...|++
T Consensus 564 ~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~ 639 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMK 639 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCE
Confidence 78887777777777777774 8999999888 8999999999866 88 8999999999888888889999
Q ss_pred EEEecCcCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC
Q 012124 202 PVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 278 (470)
Q Consensus 202 ~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~ 278 (470)
++.++.+.++ .+|+++|++++++ ++++|++++|+|-+|...+ +++|+++|+++ |+++++|.++.--...
T Consensus 640 vv~v~~d~~G--~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~-Galv~vDgAq~~a~~~-- 711 (993)
T PLN02414 640 IVVVGTDAKG--NINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDN-GGQVYMDGANMNAQVG-- 711 (993)
T ss_pred EEEeccCCCC--CcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHc-CCEEEEEecCHHhccC--
Confidence 9999997444 5999999999974 7889999999999999988 89999999999 9999999998531110
Q ss_pred CcccccccCCCCCceEEEeccCcccc----cccceeeEEEcCHHHHHHHHHH---------h--hhccCCC---Ch----
Q 012124 279 THTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKI---------Q--SQFTSGA---SS---- 336 (470)
Q Consensus 279 ~~~~~~~~~~~~~~~i~i~S~sK~~~----~~G~r~G~~~~~~~~~~~l~~~---------~--~~~~~~~---~~---- 336 (470)
.... ...+-.++++|..|+|+ ..|-.+|++.+.+++...+-.. . ...+.|+ .+
T Consensus 712 -l~~p----~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~a 786 (993)
T PLN02414 712 -LTSP----GFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSA 786 (993)
T ss_pred -cCCc----cccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhH
Confidence 1111 12355689999999774 2345589999888766554311 0 1111222 12
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEE--EeeeccCccCCcccCCCCCCCHHH
Q 012124 337 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSES 414 (470)
Q Consensus 337 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
....++..++.. ++.+.+++..+....+.+++.+.|.+..++.+..+.+.++ +.+.++... .. ...+..+
T Consensus 787 l~l~~A~~yi~~--lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~--~~----~g~~~~d 858 (993)
T PLN02414 787 LILPISYTYIAM--MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK--NT----AGIEPED 858 (993)
T ss_pred HHHHHHHHHHHH--HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc--cc----cCCCHHH
Confidence 223333444443 1467788888888899999999998754555554443211 123333110 00 0125688
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 415 LCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 415 l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+.++|+ ++||...- ..|-..+++|++.+. +.++|+.+++.|..+..+..
T Consensus 859 i~krL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 859 VAKRLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHHHHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 999998 56886544 335457899999986 88999999999988877654
No 290
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=4.9e-16 Score=151.94 Aligned_cols=201 Identities=11% Similarity=0.094 Sum_probs=152.3
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCcCCCCCccCHHhHhhhccCCce
Q 012124 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSR 229 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 229 (470)
.+..+++++++.|+..++.+++++||+|++.+..|.+....+ +..|.++..++. .|.+.+++++++++|
T Consensus 77 ~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-------~d~~~l~~~l~~~Tr 149 (395)
T PRK08114 77 GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-------LIGADIAKLIQPNTK 149 (395)
T ss_pred CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-------CCHHHHHHhcCCCce
Confidence 467888889999999999999999999999999998777654 568999988874 378999999999999
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-CEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccc-
Q 012124 230 LLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG- 307 (470)
Q Consensus 230 ~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~-~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G- 307 (470)
+|++.+|+||||.+.+ +++|+++|++++ ++++|+|.+++.-. +..... .+-.+++.|.+|.++-++
T Consensus 150 lV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~--------~~~pl~-~GaDivv~S~tKyl~Ghsd 217 (395)
T PRK08114 150 VVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV--------LFKALD-FGIDISIQAGTKYLVGHSD 217 (395)
T ss_pred EEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc--------ccCHHH-cCCcEEEEcCcccccCCCc
Confidence 9999999999999999 899999999981 49999999997411 111111 356699999999884343
Q ss_pred ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 308 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 308 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
.-.|.++..++..+.+.........+.+++....+..-|+ -+.-+.++..++...+.+.|++.|.+
T Consensus 218 v~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~-------TL~lR~~~~~~na~~va~~L~~hp~V 283 (395)
T PRK08114 218 AMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLR-------TLGVRLRQHEESSLKVAEWLAEHPEV 283 (395)
T ss_pred ceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC-------cHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 5678888888777777666555666667765443333232 34445555667777788888876554
No 291
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.78 E-value=2.1e-16 Score=154.47 Aligned_cols=317 Identities=11% Similarity=0.073 Sum_probs=213.3
Q ss_pred CChHHHHHHHHHHHHc----CCCCCCCC---cCcHHHHHHHHHHHHHHcCCCCCCCcEE-EecChHHHHHHHHHHhcCCC
Q 012124 107 DTPVLIAEAGINAIRE----GFTRYTPN---AGTLELRSAICHKLKEENGLSYTPDQIL-VSNGAKQSILQAVLAVCSPG 178 (470)
Q Consensus 107 ~~~~~~~~a~~~~~~~----~~~~y~~~---~g~~~lr~~ia~~l~~~~g~~~~~~~i~-it~g~~~al~~~~~~l~~~g 178 (470)
..|+.+++++...+.+ +...+... ....++-+.+.+.+++.++.+ +..+|+ ++++++.+++.++..++.+|
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~~~g 91 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLLGGG 91 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcCCCC
Confidence 3488999998887632 11222111 222366667777777777742 233455 55788888999999999999
Q ss_pred CeEEEcCCCCCChH--HHHHHcCCEEEEecCcCCCCCccCHHhHhh-hccCCceEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012124 179 DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLES-KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 255 (470)
Q Consensus 179 d~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~ 255 (470)
|++++..-+..+.. ++++..|.. ..+..+...+. .+..++++ .+++++++|.+++..+.||+..+ .+++|
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i--- 164 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT--- 164 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc---
Confidence 99988776665543 567888865 55655432333 34444444 77778999999999999999984 25544
Q ss_pred HHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHH---------
Q 012124 256 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI--------- 326 (470)
Q Consensus 256 ~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~--------- 326 (470)
+ ++++|+|.+.+. +..+..+..+ + +++.|..|.+|.+| +|++++++++++++...
T Consensus 165 ---~-g~l~vVDavss~----g~~~idv~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~ 228 (360)
T PRK05355 165 ---G-DVPLVADMSSDI----LSRPIDVSKF----G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKT 228 (360)
T ss_pred ---C-CCcEEEEcCccc----cCccCCHHHc----c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHH
Confidence 7 899999999875 2222333322 3 88888999998555 89999999887765431
Q ss_pred --h-hhccCCCChHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCCee-cC--CCceEEEeeeccCcc
Q 012124 327 --Q-SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKM-SE--PQGAFYLFIDFSTYY 399 (470)
Q Consensus 327 --~-~~~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~--~~~g~~~~~~~~~~~ 399 (470)
. .....+++.....++.++|+.- .+. .++.+.++.++..+++++.|++++.+.. .. ..++..+.+.+|+..
T Consensus 229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i--~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~ 306 (360)
T PRK05355 229 HADNDSMYNTPPTFAIYLAGLVFKWL--KEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE 306 (360)
T ss_pred HHhcCCccCCCcHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH
Confidence 1 1123456666677777777641 123 4788999999999999999999843222 11 123344556666532
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 400 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
+..++...+.++ |+...+|.. ..+.+|+|+.. +.+|++.+++.|+++++.
T Consensus 307 -----------~~~~~~~~~~~~-Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 307 -----------LDKKFLAEAKAA-GLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred -----------HHHHHHHHHHHC-CCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 345665666544 888766653 35789999987 899999999999998764
No 292
>PRK02769 histidine decarboxylase; Provisional
Probab=99.78 E-value=1.8e-15 Score=148.23 Aligned_cols=290 Identities=13% Similarity=0.135 Sum_probs=203.1
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCcE--EEecChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012124 132 GTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 207 (470)
Q Consensus 132 g~~~lr~~ia~~l~~~~g~~~~~~~i--~it~g~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 207 (470)
...++.+.+.+++.+.+|. .++++ ++|+|+++++...+... ..++++|++++-.|++....++.+|.+.+.|+.
T Consensus 62 ~~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~ 139 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITS 139 (380)
T ss_pred ChHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceecc
Confidence 3567777778888887885 33444 88999999987665443 257889999999999999999999999989998
Q ss_pred cCCCCCccCHHhHhhhccCC---ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC---EEEEEeccccccccCCCCcc
Q 012124 208 RISENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR---LLVLSDEIYEHIIYAPATHT 281 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~~---~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~---~~iI~Dd~~~~~~~~~~~~~ 281 (470)
++ ++.+|++.|+++++++ +.+|+++..+|+||.+.| +++|+++|+++ | +++++|.+++.+...-....
T Consensus 140 ~~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~-g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 140 LP--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKI-GIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred CC--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh-CCCceEEEEEecccceeecccCcc
Confidence 64 3459999999999765 888888999999999999 88889999999 7 79999999987443211011
Q ss_pred cccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh-------hccCCCChHHHHHHHHHHhcCCCChH
Q 012124 282 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-------QFTSGASSISQKAGVAALGLGYAGGE 354 (470)
Q Consensus 282 ~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~-------~~~~~~~~~~q~a~~~~l~~~~~~~~ 354 (470)
...++. .+-..+..|.+|.++ ....+|+++.+++..+.+..... ....+.+.....++...|+. ++..
T Consensus 214 ~~~d~~--~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~--lg~~ 288 (380)
T PRK02769 214 PPFSFA--DGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS--LGSK 288 (380)
T ss_pred ccCCcc--CCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH--HCHH
Confidence 111121 234567788999886 44678999988877665421111 11222333444555555553 1356
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeec-CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012124 355 VVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433 (470)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f 433 (470)
..+++.+...+..+++.+.|++. |++.. .|.... +.++.| + .++ .+ |-.+.+-
T Consensus 289 G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~-v~f~~~--------------~-~~~----~~--~w~l~~~--- 342 (380)
T PRK02769 289 GLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSIT-VVFPCP--------------S-ERI----WK--KWHLATS--- 342 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceE-EEEcCC--------------C-HHH----Hh--CeeEccc---
Confidence 67888888899999999999876 77654 444444 444543 2 222 22 4444432
Q ss_pred CCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 434 GDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 434 ~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
++++|+.++. +.+.++++++.|...+.
T Consensus 343 --~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 343 --GNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred --CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 2489999886 88889999999988765
No 293
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.78 E-value=9.2e-18 Score=154.08 Aligned_cols=289 Identities=19% Similarity=0.267 Sum_probs=181.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCC----C--CeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP----G--DEVIIPAPFWVSYPEMARIADATPVILP 206 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~----g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 206 (470)
.++|.+.|.+....--+...+.-.|++++|+++.++.++.+|... + -.|+...|.|+.|....+.+........
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 478888888877665555556669999999999999999998532 1 3788999999999977554332222222
Q ss_pred CcCCCCCccCHHhHhhhccCCceEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 207 TRISENFLLDPKVLESKLTEKSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 207 ~~~~~~~~~d~~~l~~~l~~~~~~i-~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
- |....... +.....| ++++||||.|.. ++.++ +.- +..+|.|-+|..=.|. ++..
T Consensus 125 G--------da~~~~~~-~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~-~~k~I~D~AYYWPhyT-----pI~~ 181 (363)
T PF04864_consen 125 G--------DASNFKNS-DNPSPYIELVTSPNNPDGQL-----REAVL---NGS-SGKVIHDLAYYWPHYT-----PITA 181 (363)
T ss_dssp E--------ECCCGTT--S-CCGEEEEEESS-TTT-----------SS---TTT-EEEEEEE-TT-STTTS--------S
T ss_pred c--------cHHhhccC-CCCCCeEEEEeCCCCCcccc-----cchhc---CCC-Ccceeeeeeeeccccc-----ccCC
Confidence 1 21222110 1123344 689999999986 33444 243 7788999998752222 2222
Q ss_pred cCCCCCceEEEeccCcccccccceeeEEEcC-HHHHHHHHHHhhhccCCCChHHHHHHHHHHhc---CCCC----hHHHH
Q 012124 286 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGL---GYAG----GEVVS 357 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~----~~~~~ 357 (470)
..+..|.+.|+||.-|-+|-|+||.+.. +++.+++.......+.+.+.=.|.-++..|+. +... .+...
T Consensus 182 ---~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~ 258 (363)
T PF04864_consen 182 ---PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFH 258 (363)
T ss_dssp ----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHH
T ss_pred ---CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHH
Confidence 1356699999999999999999998874 57888899988889999999999888877762 1110 13455
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCeec-------------CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCC
Q 012124 358 KMVKAFRERRDFLVKSFGELEGVKMS-------------EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 424 (470)
Q Consensus 358 ~~~~~~~~~~~~l~~~L~~~~g~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 424 (470)
--++.+++|.+.|.+.+..-.-+.+. ...+.-|.|+++... .. +=|...++++|
T Consensus 259 f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e------------ed-~DC~~~l~~~~ 325 (363)
T PF04864_consen 259 FGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE------------ED-EDCYAVLREAK 325 (363)
T ss_dssp HHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC------------GG-SSHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc------------cc-ccHHHHHHhCC
Confidence 56677788888888888763112211 112345699999753 11 22334455779
Q ss_pred EEEECCCCCCC-CCcEEEEeecCHHHHHHHHHHHHHH
Q 012124 425 VALVPGDAFGD-DTCIRISYAASLTTLQAAVERIKKG 460 (470)
Q Consensus 425 I~v~pg~~f~~-~~~iRls~~~~~~~i~~~l~~l~~~ 460 (470)
|..+.|..|+. ..++|||+-.++++++.+++||.++
T Consensus 326 I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 326 IITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred cccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999996 4799999999999999999999754
No 294
>PRK06917 hypothetical protein; Provisional
Probab=99.78 E-value=9.3e-16 Score=153.92 Aligned_cols=355 Identities=14% Similarity=0.098 Sum_probs=213.0
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+..+.+. ..-..+.+..+++.+.+..+ ...+.+++++++++|.+
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve 105 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-SQFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANE 105 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHHH
Confidence 67789999888533 333 79999999999886432221 11123556667777765433 12358999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHH-cCCE------------EEEecCcCCCC--Cc--------cCH
Q 012124 169 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-ADAT------------PVILPTRISEN--FL--------LDP 217 (470)
Q Consensus 169 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~--~~--------~d~ 217 (470)
.+++... .+| .+|+...-+|++....... .|.. +..++...... +. -++
T Consensus 106 ~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 185 (447)
T PRK06917 106 TAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACA 185 (447)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHH
Confidence 9998752 133 6788889999987654332 2211 11122110000 00 023
Q ss_pred HhHhhhcc----CCceEEEEcCCC-CCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCC
Q 012124 218 KVLESKLT----EKSRLLILCSPS-NPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMW 290 (470)
Q Consensus 218 ~~l~~~l~----~~~~~i~l~~p~-nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~ 290 (470)
+.+++.++ +++.+|++...+ +-.|. ..+++.+++|.++|++| |+++|.||++..|.-.+.... ....+.+
T Consensus 186 ~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~-g~llI~DEv~tGfGRtG~~~a~~~~gv~P-- 262 (447)
T PRK06917 186 TELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY-DILFIADEVMTGLGRTGAMFAMEHWGVEP-- 262 (447)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc-CCEEEEechhhCcCcccchhhHHhcCCCC--
Confidence 56666664 246677665444 44454 56899999999999999 999999999987532222110 1112222
Q ss_pred CceEEEeccCcccccccc-eeeEEEcCHHHHHHHHHH----hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 365 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 365 (470)
| +-+|+|.++ .|+ ++|.+++.+++.+.+... ....+++.+++...++.+.|+.-.. ++ +.+..++
T Consensus 263 D----i~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~----l~~~~~~ 332 (447)
T PRK06917 263 D----IMTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK-HN----LPEKAAE 332 (447)
T ss_pred C----EEEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH-CC----HHHHHHH
Confidence 2 456899998 886 999999999998877532 1234667889998888888764110 12 3333333
Q ss_pred HHHHHHHHhcc----CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--C-CCCc
Q 012124 366 RRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--G-DDTC 438 (470)
Q Consensus 366 ~~~~l~~~L~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f--~-~~~~ 438 (470)
+-+.+.+.|++ .+ +......-|+++.+++...................+.+.++++ ||.+.|...- + ..+.
T Consensus 333 ~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~~~g~~~~~ 410 (447)
T PRK06917 333 KGEYLIKGLQKVQQQST-IIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKN-GLLLYPAVAGQDGKEGDA 410 (447)
T ss_pred HHHHHHHHHHHHHhcCC-CEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhC-CcEEEecccccCCCCCCE
Confidence 44444444433 32 2111223355566665221000000000000134566777665 9999874210 1 1367
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012124 439 IRISYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 439 iRls~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
+|++.. .++++|++++++|.++++++
T Consensus 411 i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 411 VIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 899866 59999999999999999775
No 295
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=8.9e-16 Score=154.19 Aligned_cols=348 Identities=16% Similarity=0.140 Sum_probs=209.2
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+..+.. ......+....+++.+.+..+ ...+.+.+++++++|.+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA~e 127 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSM-IGYTHSERAIRVAEKLAEISP--IENPKVLFGLSGSDAVD 127 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccc-cCccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHH
Confidence 6788999998853 3333 7889999999987532110 111112445556666655333 22368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCC-------------EEEEecCcCCCC--Cc----cCH--------H
Q 012124 169 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISEN--FL----LDP--------K 218 (470)
Q Consensus 169 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--~~----~d~--------~ 218 (470)
.+++... .....|+....+|++....... .|. .++.+|...... +. -+. +
T Consensus 128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (457)
T PRK05639 128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLD 207 (457)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHH
Confidence 9988753 2335788888899986643322 221 123333321100 00 022 2
Q ss_pred hHhhhc------cCCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCC
Q 012124 219 VLESKL------TEKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 290 (470)
Q Consensus 219 ~l~~~l------~~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~ 290 (470)
.+++.+ .+++.+|++...+...|. ..+.+.+++|.++|++| |+++|.||++..|...+... .....+.+
T Consensus 208 ~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~~a~~~~gv~P-- 284 (457)
T PRK05639 208 YLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH-GILLVMDEVQTGIGRTGKWFASEWFEVKP-- 284 (457)
T ss_pred HHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCcCchHHHHHhcCCCC--
Confidence 344443 245667777555666676 56799999999999999 99999999998753333210 11112222
Q ss_pred CceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 370 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 370 (470)
| +-+|+|.++ .|+.+|.+++++++.+.. ......+++.+++...++.+.|+.-.. ++.+ +..+++-+++
T Consensus 285 D----iv~~gK~l~-gG~pi~av~~~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~l~~l~~-~~l~----~~~~~~g~~l 353 (457)
T PRK05639 285 D----LIIFGKGVA-SGMGLSGVIGRKELMDLT-SGSALLTPAANPVISAAAEATLEIIEE-ENLL----KNALKVGEFI 353 (457)
T ss_pred C----EEEechhhc-CCCcceeEEehHHHHhhc-CCCcccCCCcCHHHHHHHHHHHHHHHH-ccHH----HHHHHHHHHH
Confidence 2 333899998 899999999999998832 212234667788888777777763111 2222 3333344444
Q ss_pred HHHhcc----CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-
Q 012124 371 VKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA- 445 (470)
Q Consensus 371 ~~~L~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~- 445 (470)
.+.|++ . ++......-|+++.+.+-..... ........+.+.++++ ||.+.+... ..+.+|+....
T Consensus 354 ~~~L~~l~~~~-~~~~~VrG~Gl~~gve~~~~~~~-----~~~~~~~~~~~~~~~~-Gv~~~~~g~--~~~~lr~~Ppl~ 424 (457)
T PRK05639 354 KKRLLEMKESF-EVIGDVRGKGLMIGVEIVKENGK-----PDPELTGKICWRAFEL-GLILPSYGM--FGNVIRITPPLV 424 (457)
T ss_pred HHHHHHHHHhC-CCEEeeccceeEEEEEEecCCCC-----CCHHHHHHHHHHHHhC-CeEEeecCC--CCCEEEEeCCCc
Confidence 444443 3 22222223456566665321000 0000234667777765 999876421 14689998775
Q ss_pred -CHHHHHHHHHHHHHHHHhhC
Q 012124 446 -SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 446 -~~~~i~~~l~~l~~~l~~~~ 465 (470)
+++++++++++|+++++++.
T Consensus 425 it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 425 ITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred cCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764
No 296
>PRK07481 hypothetical protein; Provisional
Probab=99.77 E-value=7.5e-16 Score=154.80 Aligned_cols=352 Identities=15% Similarity=0.135 Sum_probs=209.6
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+..+......-..+.+..+++.+.+..+. -..+.+++++++++|.+
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEAve 118 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGSDSVE 118 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchHHHHH
Confidence 5778899988743 3333 688999999998763221100011235566677777654421 12368999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCcCC--CCCc-cCHHh-----
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRIS--ENFL-LDPKV----- 219 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~--~~~~-~d~~~----- 219 (470)
.+++.... +| .+|+...-+|++........+. .+..++.... ..+. -|++.
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 99886431 33 5788888999986643222111 1122221100 0011 13333
Q ss_pred ---Hhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCC
Q 012124 220 ---LESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 290 (470)
Q Consensus 220 ---l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~ 290 (470)
+++.+. +++.+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..|...+... .....+.++
T Consensus 199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~a~~~~gv~PD- 276 (449)
T PRK07481 199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH-GILLIADEVVTGFGRTGSWFGSRGWGVKPD- 276 (449)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCcCchhhHhhhcCCCCC-
Confidence 344332 35667777555655676 56888999999999999 99999999999863333211 111122222
Q ss_pred CceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
+-+++|.++ .| +++|.+++++++.+.+... ....+++.+++...++.+.|+.-.. ++ +.+.
T Consensus 277 -----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~-~~----l~~~ 345 (449)
T PRK07481 277 -----IMCLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR-ED----LPAN 345 (449)
T ss_pred -----EEEEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh-hh----HHHH
Confidence 445789998 88 5999999999998877531 2334677899998888888764111 22 2333
Q ss_pred HHHHHHHHHHHhcc----CCCCeecCCCceEEEeeeccCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012124 363 FRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDT 437 (470)
Q Consensus 363 ~~~~~~~l~~~L~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gI~v~pg~~f~~~~ 437 (470)
.++.-+.+.+.|++ .+ +......-|+++.+++....... ..... ......+.+.++++ ||.+.+.. +
T Consensus 346 ~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Glm~gi~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g-----~ 417 (449)
T PRK07481 346 AAKRGAYLLEGLQPLKERFE-LVGDVRGKGLMLALDLVADKATR-EPIDPSKGYANAVADVAREN-GVLVRPSG-----T 417 (449)
T ss_pred HHHHHHHHHHHHHHHhhcCC-CeEEEeecceEEEEEeccccccc-CCCCchhHHHHHHHHHHHhC-CeEEEecC-----C
Confidence 33334444444433 32 21111233555666663210000 00000 00134566666655 99997742 3
Q ss_pred cEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 438 CIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 438 ~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
.+||+... +++++++++++|.++++++.
T Consensus 418 ~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 418 KIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 58888554 99999999999999998764
No 297
>PRK06105 aminotransferase; Provisional
Probab=99.77 E-value=6e-16 Score=155.87 Aligned_cols=351 Identities=13% Similarity=0.056 Sum_probs=211.5
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+............+.+..+++.|.+..+. .-+.+++++++++|.+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseAve 123 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPV--PMSKVFFTNSGSEAND 123 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHH
Confidence 6778999988853 3333 788999999998763211111112345566677777664432 2368999999999999
Q ss_pred HHHHHhc------C-CC-CeEEEcCCCCCChHHHHHH-cCCE------------EEEecCcCCCCCc-----------cC
Q 012124 169 QAVLAVC------S-PG-DEVIIPAPFWVSYPEMARI-ADAT------------PVILPTRISENFL-----------LD 216 (470)
Q Consensus 169 ~~~~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~~-----------~d 216 (470)
.+++... . +| .+|+...-+|++....... .|.. +..+|......+. ..
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL 203 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence 9998742 1 23 5788888889887643221 1111 1112211000000 01
Q ss_pred HHhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCC
Q 012124 217 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMW 290 (470)
Q Consensus 217 ~~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~ 290 (470)
++.+++.+. +++.+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..|...+.... ....+.+
T Consensus 204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~-~~llI~DEv~tG~GRtG~~f~~~~~~v~P-- 280 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY-DILLVADEVICGFGRTGNMFGCETFGIKP-- 280 (460)
T ss_pred HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCeEEEeccccCCCcCchhhhHHhcCCCC--
Confidence 345666662 34666766555666676 46899999999999999 999999999987632232111 1112222
Q ss_pred CceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
| +-+|+|.++ .| +++|.+++++++.+.+... ....+++.++++..++.+.|+.-.. + ++.+.
T Consensus 281 D----i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~-~----~l~~~ 350 (460)
T PRK06105 281 D----ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE-R----DLVGN 350 (460)
T ss_pred C----eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh-c----cHHHH
Confidence 2 557899998 77 6999999999998877532 1235677889998888777764111 2 23333
Q ss_pred HHHHHHHHHHHhcc---CCCCeecCCCceEEEeeeccCccCCcccCCCCCC-CHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012124 363 FRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVALVPGDAFGDDTC 438 (470)
Q Consensus 363 ~~~~~~~l~~~L~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gI~v~pg~~f~~~~~ 438 (470)
.++.-+++.+.|++ .+-+. ....-|+++-+++....... ....... ....+...++++ ||.+.+. .+.
T Consensus 351 v~~~g~~l~~~L~~l~~~~~v~-~vrG~Gl~~gie~~~~~~~~-~~~~~~~~~a~~i~~~~~~~-Gvl~~~~-----g~~ 422 (460)
T PRK06105 351 AAERGARLQARLRALADHPLVG-EVRGVGLIAAVELVADKATK-TPFEPPGKVGARANAAAHEH-GVISRAM-----GDT 422 (460)
T ss_pred HHHHHHHHHHHHHHhhcCCCeE-EEEecceEEEEEEecCcccC-CCCCchhHHHHHHHHHHHHC-CeEEEec-----CCE
Confidence 34444444444443 32221 11233565656653210000 0000000 124566666654 9999773 257
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 439 IRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 439 iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+|++... +++++++++++|.++++++.
T Consensus 423 i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 423 LAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9998765 99999999999999998764
No 298
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.77 E-value=5.8e-16 Score=155.50 Aligned_cols=345 Identities=14% Similarity=0.055 Sum_probs=213.4
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+..+.. ...-..+....+++.+.+..+. .-+.+++++++++|.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGseAve 128 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAM-LAGCTHEPAIELAERLAALTGG--TLGHAFFASDGASAVE 128 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHHHHH
Confidence 5778999988853 3333 7889999999987632111 1111234556677777654332 2258999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHH-cCC------------EEEEecCcCCCC--Cc--------cCH
Q 012124 169 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN--FL--------LDP 217 (470)
Q Consensus 169 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~--~~--------~d~ 217 (470)
.+++... .+| .+|+...-+|++....... .|- .+..++.....+ +. -++
T Consensus 129 ~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 208 (453)
T PRK06943 129 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARAL 208 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHH
Confidence 9998752 123 6788889999986633222 111 122232211000 00 124
Q ss_pred HhHhhhcc---CCceEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCC
Q 012124 218 KVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWE 291 (470)
Q Consensus 218 ~~l~~~l~---~~~~~i~l~~-p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~ 291 (470)
+.+++.+. +++.+|++.. .+.-.|. ..|++.+++|.++|++| |+++|.||++..|...+.... ....+.++
T Consensus 209 ~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~-gillI~DEV~TG~GRtG~~fa~~~~gv~PD-- 285 (453)
T PRK06943 209 ADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY-GVHLIADEIAVGCGRTGTFFACEQAGVWPD-- 285 (453)
T ss_pred HHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCCCcchhHHHhCCCCCC--
Confidence 66777764 4667777755 3665676 66899999999999999 999999999988633332110 11122222
Q ss_pred ceEEEeccCccccccc-ceeeEEEcCHHHHHHHHH------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 012124 292 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 364 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 364 (470)
+-+++|.++ .| +++|.+++++++.+.+.. .....+++.+++...++.+.|+.-.. ++.+++. +
T Consensus 286 ----ivt~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~-~~l~~~~----~ 355 (453)
T PRK06943 286 ----FLCLSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE-DDVLARN----A 355 (453)
T ss_pred ----eEeeehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHH----H
Confidence 444789998 89 599999999999887753 12344667899998888888764111 2223333 3
Q ss_pred HHHHHHHHHhcc---CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012124 365 ERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 441 (470)
Q Consensus 365 ~~~~~l~~~L~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRl 441 (470)
++-+++.+.|++ .+++.-. ..-|+++-+++..... .. ......+.+.++++ ||.+.+.. +.+|+
T Consensus 356 ~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gvel~~~~~--~~----~~~~~~i~~~~~~~-Gll~~~~g-----~~l~~ 422 (453)
T PRK06943 356 RKSARLRAALAPLAAHPQVRHL-RQRGTIFAFDVALDGD--AA----RTFSRRFFEAALER-ELLLRPIG-----TTVYL 422 (453)
T ss_pred HHHHHHHHHHHHHhcCCCEEeE-eccccEEEEEEccCCC--cc----hHHHHHHHHHHHHC-CcEEEecC-----CEEEE
Confidence 333334444433 3444322 2345656666642100 00 00134567777665 99887632 46899
Q ss_pred E--eecCHHHHHHHHHHHHHHHHhhC
Q 012124 442 S--YAASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 442 s--~~~~~~~i~~~l~~l~~~l~~~~ 465 (470)
+ +..+++++++++++|+++++++.
T Consensus 423 ~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 423 MPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 8 44599999999999999998763
No 299
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.77 E-value=2.4e-16 Score=145.81 Aligned_cols=324 Identities=15% Similarity=0.185 Sum_probs=225.1
Q ss_pred CCChHHHHHHHHHHHHcC---CCC----CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCC
Q 012124 106 FDTPVLIAEAGINAIREG---FTR----YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG 178 (470)
Q Consensus 106 ~~~~~~~~~a~~~~~~~~---~~~----y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~g 178 (470)
..-++.+++++.+.+.+. ..+ -+...-...|.+.+|+..++.-- .--..+++.+.++ |+.+.+.+ ||
T Consensus 184 ms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aA--LlFsSCfVANDst--LftLak~l--pg 257 (570)
T KOG1360|consen 184 MSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAA--LLFSSCFVANDST--LFTLAKKL--PG 257 (570)
T ss_pred ccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcce--eeeeeeeeccchH--HHHHHHHC--CC
Confidence 334899999999998762 111 22233445777888877543100 0011333434433 33333333 88
Q ss_pred CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC----CceEEEEcCCCCCcccCCCHHHHHHHHH
Q 012124 179 DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 179 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
-+|.-+.-.+.+..+.++..++.-.-... + |++.|++++.+ .+|.|-+.+.+..+|.+.| +++|++
T Consensus 258 cei~SD~gNHASMI~GIrns~v~K~IFrH---N----D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcD 327 (570)
T KOG1360|consen 258 CEIFSDEGNHASMIQGIRNSRVPKHIFRH---N----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCD 327 (570)
T ss_pred cEEeccccchHHHHHHhhhcCCcceeecc---C----CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHH
Confidence 88888888888888888988887655553 2 88888888843 5778889999999999999 889999
Q ss_pred HHHhCCCEEEEEeccccccccCCCCcccccccCC-CCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCC
Q 012124 255 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 333 (470)
Q Consensus 255 ~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 333 (470)
++++| |.+-+.||++.-..|+..+. .+..-++ +....|+-|++.|+||+-| ||+.+..++++.++.+...+.+.
T Consensus 328 vah~y-GAiTFlDEVHAVGlYG~rGa-GvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFT 402 (570)
T KOG1360|consen 328 VAHKY-GAITFLDEVHAVGLYGPRGA-GVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFT 402 (570)
T ss_pred HHHHh-CceeeeehhhhhccccCCCC-CccccCCcchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEe
Confidence 99999 99999999999888875432 2222222 1344588899999999888 99999999999999887655443
Q ss_pred --CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC
Q 012124 334 --ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 334 --~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
.|+.....+.++++.-. -+.-+.+|...+++..++.+.|.++ |+.+.+..+-+ +-+++.+.- .
T Consensus 403 TSLPP~vl~GAleaVr~lk--~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pSHI-iPv~vgda~-----------l 467 (570)
T KOG1360|consen 403 TSLPPMVLAGALEAVRILK--SEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNPSHI-IPVRVGDAA-----------L 467 (570)
T ss_pred cCCChHHHHhHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCCcce-eeeeccCHH-----------H
Confidence 34544444444444210 1112455666677788888888888 88887555444 556665431 5
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
..+++..|+.++||+|..-.+... ...+||..+. +++.++.+++.+..+++++.
T Consensus 468 ~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 468 AKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred HHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 678888999999999987554332 3478888765 88999999999999998764
No 300
>PRK06062 hypothetical protein; Provisional
Probab=99.77 E-value=6.3e-16 Score=155.32 Aligned_cols=350 Identities=13% Similarity=0.108 Sum_probs=211.2
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. +|.+.+++.+++.+..... + .-..+.+..+++.+....+ -..+.+++++++++|.+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~-~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve 126 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVA-P-AHANDARSEAARLIAERAP--GDLSKVFFTNGGADANE 126 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcC-C-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHHHHH
Confidence 67889999988533 333 7889999999987632211 1 2234556667777765432 12368999999999999
Q ss_pred HHHHHhcC-C-CCeEEEcCCCCCChHHHHHHc-CCE-----------EEEecCcCCC--CCc--cC-------HHhHhhh
Q 012124 169 QAVLAVCS-P-GDEVIIPAPFWVSYPEMARIA-DAT-----------PVILPTRISE--NFL--LD-------PKVLESK 223 (470)
Q Consensus 169 ~~~~~l~~-~-gd~Vlv~~p~y~~~~~~~~~~-g~~-----------~~~v~~~~~~--~~~--~d-------~~~l~~~ 223 (470)
.+++.... . ..+|+...-+|++....+... |.. +..++..... .+. -| ++.+++.
T Consensus 127 ~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~ 206 (451)
T PRK06062 127 HAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERV 206 (451)
T ss_pred HHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHH
Confidence 99886421 2 367888888999876543322 111 1122211000 010 02 5677777
Q ss_pred cc----CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEe
Q 012124 224 LT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVN 297 (470)
Q Consensus 224 l~----~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~ 297 (470)
++ +++.+|++...+...|.. .+++.+++|.++|++| |+++|.||++..|...+... .....+.+ | +.
T Consensus 207 l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~~a~~~~gv~P--D----i~ 279 (451)
T PRK06062 207 IELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH-GIVLIADEVMAGFGRTGKWFAIEHFGVVP--D----LI 279 (451)
T ss_pred HHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeeccccCCCcCcHHHHHHhcCCCC--C----ee
Confidence 74 345666665555556765 5889999999999999 99999999999863222110 11112222 2 55
Q ss_pred ccCcccccccc-eeeEEEcCHHHHHHHHHH--hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HHHHHH
Q 012124 298 GFSKAFAMTGW-RLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR-DFLVKS 373 (470)
Q Consensus 298 S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 373 (470)
+|+|.++ .|+ ++|.+++.+++.+.+... ....+++.+++...++.+.|+.-.. ++ +.++.++.- +++.+.
T Consensus 280 t~gK~lg-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~----l~~~~~~~G~~~l~~~ 353 (451)
T PRK06062 280 TFAKGVN-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE-EG----IVENAARIGAEVLGPG 353 (451)
T ss_pred eechhhh-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-cC----HHHHHHHHHHHHHHHH
Confidence 7899998 885 999999999998887532 2334677889988888888864111 12 222222222 233333
Q ss_pred hcc----CCCCeecCCCceEEEeeeccCccC-Ccc-cCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--
Q 012124 374 FGE----LEGVKMSEPQGAFYLFIDFSTYYG-SEA-EGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-- 444 (470)
Q Consensus 374 L~~----~~g~~~~~~~~g~~~~~~~~~~~~-~~~-~~~~-~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~-- 444 (470)
|++ .+.+.-. ..-|+++.+.+..... ... .... .......+.+.|+++ ||.+.+. .+.+|++..
T Consensus 354 L~~l~~~~~~v~~v-rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-----~~~lrl~ppl~ 426 (451)
T PRK06062 354 LRELAERHPSVGEV-RGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER-GLLPFVN-----GNRIHVVPPCT 426 (451)
T ss_pred HHHHHhcCCcEEeE-eccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC-CcEEeec-----CCEEEEECCcc
Confidence 332 3222111 2335555666532100 000 0000 000134677777665 9987652 357899874
Q ss_pred cCHHHHHHHHHHHHHHHHhhC
Q 012124 445 ASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 445 ~~~~~i~~~l~~l~~~l~~~~ 465 (470)
.++++|++++++|+++++++.
T Consensus 427 ~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 427 VTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 499999999999999998764
No 301
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.77 E-value=1e-15 Score=149.43 Aligned_cols=355 Identities=14% Similarity=0.135 Sum_probs=222.4
Q ss_pred HHHHHHHhcCCCeEEccCCCCC--CCC---hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEE
Q 012124 84 DQATALAQAGVSVIRLAAGEPD--FDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 158 (470)
Q Consensus 84 ~~~~~~~~~~~~~i~l~~g~~~--~~~---~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 158 (470)
++.+.+.+.|.+...|...+-. +.+ ...+.+++...+..+.-.|..++.+.+|.+.+++++ | .+.++
T Consensus 26 ~r~~~l~~ag~n~f~l~~~~v~IDLlSDS~T~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~vAe~l----G----~e~aV 97 (460)
T PRK13237 26 EREAAMKEAGYNTFLLRSEDVYIDLLTDSGTNAMSDRQWAGMMIGDEAYAGSRNFYHLEETVQEYY----G----FKHVV 97 (460)
T ss_pred HHHHHHHHcCCCcccCCcCcEEEECcccCCchhccHHHHHHHhhcchhhcCCCcHHHHHHHHHHHH----C----CCeEE
Confidence 4445555666655555555421 111 133444444444445667988889999999999996 3 35799
Q ss_pred EecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH-HHHHHcCCEEEEecCc--------CCCCCccCHHhHhhhccCC--
Q 012124 159 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTR--------ISENFLLDPKVLESKLTEK-- 227 (470)
Q Consensus 159 it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~-- 227 (470)
.+++++.|+.+++...++|||.| +..+|.... ..+...|+..+.+..+ ....+.+|++.|+++++++
T Consensus 98 ~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~ 175 (460)
T PRK13237 98 PTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA 175 (460)
T ss_pred EeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC
Confidence 99999999998777678999975 444444433 3377888866655322 1234679999999999653
Q ss_pred --ceEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEEecccccc----cc---CCCCcccccc----cCCCCCce
Q 012124 228 --SRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI----IY---APATHTSFAS----LPGMWERT 293 (470)
Q Consensus 228 --~~~i~l~~p~nPt-G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~----~~---~~~~~~~~~~----~~~~~~~~ 293 (470)
++++.+..++|.. |.+.|.++++++.++|++| |+.||+|.+...- .- .+....++.. +. .--.
T Consensus 176 ~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~-Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~--s~aD 252 (460)
T PRK13237 176 ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKH-GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMF--SYAD 252 (460)
T ss_pred CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHc-CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhcc--CcCc
Confidence 3456667777876 7999999999999999999 9999999987631 10 0111122211 11 1223
Q ss_pred EEEeccCcccccccceeeEEEc-CHHHHHHHHHHhhhc----cCC-CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 012124 294 LTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF----TSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 367 (470)
Q Consensus 294 i~i~S~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~----~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (470)
+...|++|.++.+ . -|+++. ++++.++++...-.+ +++ .+.-...+++..|..... .+++.... ...
T Consensus 253 ~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~-~~y~~~ri----~~~ 325 (460)
T PRK13237 253 GCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ-YEYIEHRV----GQV 325 (460)
T ss_pred EEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch-HHHHHHHH----HHH
Confidence 6677899998633 2 377775 667888887764332 111 112133344433443221 23333333 345
Q ss_pred HHHHHHhccCCCCeecCCCceEEEeeeccCccC-CcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCC-CCC---------
Q 012124 368 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVALVP-GDA-FGD--------- 435 (470)
Q Consensus 368 ~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~gI~v~p-g~~-f~~--------- 435 (470)
++|.+.|.+. |+.+..|.+|.-++++...... .+... -....++..|..+.||--.- |+. ++.
T Consensus 326 ~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~----~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~ 400 (460)
T PRK13237 326 RYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQ----FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHY 400 (460)
T ss_pred HHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCccc----ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCC
Confidence 6777777776 8999999999888886433200 00011 15678888888888885432 222 111
Q ss_pred --CCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012124 436 --DTCIRISYAA---SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 436 --~~~iRls~~~---~~~~i~~~l~~l~~~l~~ 463 (470)
-.-+||++.. +.+.++-..++|..+.++
T Consensus 401 ~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 401 PKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred CccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1369999986 888899998888887764
No 302
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.77 E-value=7.8e-16 Score=154.23 Aligned_cols=344 Identities=14% Similarity=0.085 Sum_probs=210.3
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+-.+.. ......+....+++.+.+... -..+.+++++++++|.+
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e 120 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAP-AFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGSESVD 120 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHH
Confidence 5778899988753 2333 7889999999987522111 111223555667777765432 12368999999999999
Q ss_pred HHHHHhcC-------C-CCeEEEcCCCCCChHHHHH-HcC------------CEEEEecCcCC---CCCcc--------C
Q 012124 169 QAVLAVCS-------P-GDEVIIPAPFWVSYPEMAR-IAD------------ATPVILPTRIS---ENFLL--------D 216 (470)
Q Consensus 169 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~-~~g------------~~~~~v~~~~~---~~~~~--------d 216 (470)
.+++.... + ..+|+...-+|++.....- ..| ..+..+|...+ ..+.. .
T Consensus 121 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 200 (442)
T PRK13360 121 TALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAEL 200 (442)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHH
Confidence 99886431 2 2578888999998653221 111 11222332210 00111 1
Q ss_pred HHhHhhhcc----CCceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCC
Q 012124 217 PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 290 (470)
Q Consensus 217 ~~~l~~~l~----~~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~ 290 (470)
.+.+++.+. +++.+|++...+...|.. .+++.+++|.++|++| |+++|.||++..+...+... .....+.+
T Consensus 201 ~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~-g~llI~DEv~tG~GrtG~~~a~~~~gv~P-- 277 (442)
T PRK13360 201 ADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH-GILLIFDEVITGFGRLGAPFAAQYFGVTP-- 277 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccchhhhhcCCCC--
Confidence 456777763 345566665556666764 6788999999999999 99999999997753222211 11112222
Q ss_pred CceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
| +-+|+|.++ .| +++|.+++++++.+.+... ....+++.+++...++.+.|+.- ++ ..+.++
T Consensus 278 D----ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l---~~--~~l~~~ 347 (442)
T PRK13360 278 D----LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLY---ER--EGLLTR 347 (442)
T ss_pred c----eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHH
Confidence 2 347899997 67 7899999999998876531 23356678888888888877641 11 123344
Q ss_pred HHHHHHHHHHHhccC---CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012124 363 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 439 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~i 439 (470)
.+++-+++.+.|+++ +.+.-. ...|++.-+.+..... .......++...|+++ ||.+.++ .+.+
T Consensus 348 ~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~~~~l~~~~~------~~~~~~~~~~~~l~~~-Gvl~~~~-----~~~l 414 (442)
T PRK13360 348 AARLAPYWEDALHSLRDAPHVIDI-RNLGLVGAVELAPRDG------KPGKRAYEVFLKCFEK-GLMIRYT-----GDIL 414 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCCeeee-eccceEEEEEEecCCC------CcchhHHHHHHHHHHC-CcEEEec-----CCEE
Confidence 455555555555543 222111 1224444444422100 0001345677777765 9998763 2579
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhh
Q 012124 440 RISYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 440 Rls~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
||+.. .+++++++++++|.++++++
T Consensus 415 r~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 415 ALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99965 49999999999999998764
No 303
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=1.5e-17 Score=145.22 Aligned_cols=165 Identities=23% Similarity=0.232 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH-HHHHHcCCEEEEecCcCCCC
Q 012124 134 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTRISEN 212 (470)
Q Consensus 134 ~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~ 212 (470)
.++++.+++++. .+.+++++++|+++++.++++++.+++++|++.+++|++.. ..++..|++++.++.+.++.
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence 577888888763 46789999999999999999999988999999999999998 88899999999999875443
Q ss_pred CccCHHhHhhhc-cCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCC
Q 012124 213 FLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 291 (470)
Q Consensus 213 ~~~d~~~l~~~l-~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~ 291 (470)
...+.+.+++.. .++++++++++++||+|..++ .++|.++|+++ |+++|+|++|..+...... ..... .+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~-~~~li~D~a~~~~~~~~~~----~~~~~-~~ 147 (170)
T cd01494 77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEY-GILLLVDAASAGGASPAPG----VLIPE-GG 147 (170)
T ss_pred cchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHc-CCEEEEecccccccccccc----ccccc-cc
Confidence 333333554444 568889999999999999998 58888999999 9999999999986654321 11111 34
Q ss_pred ceEEEeccCcccccccceeeEEEc
Q 012124 292 RTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
..+++.|++|.++ + .++|++++
T Consensus 148 ~d~~~~s~~K~~~-~-~~~G~l~~ 169 (170)
T cd01494 148 ADVVTFSLHKNLG-G-EGGGVVIV 169 (170)
T ss_pred CCEEEEEcccccC-C-CceEEEEe
Confidence 5688999999997 3 77999875
No 304
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.77 E-value=8.3e-16 Score=153.10 Aligned_cols=338 Identities=13% Similarity=0.083 Sum_probs=211.0
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+.. ...-..+.+..+++.|.+..+ ...+.+++++++++|.+
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve 117 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGITHPPAIELCRKLVAMTP--QPLECVFLADSGSVAVE 117 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcc-ccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHH
Confidence 57789999887532 222 7889999999987632111 111123556677777765433 22368999999999999
Q ss_pred HHHHHhcC------C-CCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcCCC---CC-ccCHHhHhhh
Q 012124 169 QAVLAVCS------P-GDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISE---NF-LLDPKVLESK 223 (470)
Q Consensus 169 ~~~~~l~~------~-gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~---~~-~~d~~~l~~~ 223 (470)
.+++.... . ..+|+....+|++....+... +- .++.+|..... .+ .-|++.+++.
T Consensus 118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 197 (428)
T PRK07986 118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARL 197 (428)
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHH
Confidence 99886432 2 367888899999865332221 21 11122221000 00 1256677777
Q ss_pred cc---CCceEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEe
Q 012124 224 LT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVN 297 (470)
Q Consensus 224 l~---~~~~~i~l~~-p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~ 297 (470)
++ +++.+|++.. .+.-.|. ..+++.+++|.++|++| |+++|.||++..+...+... .....+.+ | |+
T Consensus 198 l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~-g~lLI~DEv~tG~GrtG~~fa~~~~gv~P--D--i~-- 270 (428)
T PRK07986 198 MAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE-GILLIADEIATGFGRTGKLFACEHAGIAP--D--IL-- 270 (428)
T ss_pred HHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCCeeeecccCCCC--C--EE--
Confidence 74 3455666654 3555565 55779999999999999 99999999997753222210 01111222 1 33
Q ss_pred ccCccccccc-ceeeEEEcCHHHHHHHHHH-----hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 012124 298 GFSKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 371 (470)
Q Consensus 298 S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (470)
+|+|.++ .| +.+|.+++++++.+.+... ....+++.+++...++.+.|+.-.. + ...+..+++-+++.
T Consensus 271 t~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~-~----~~~~~~~~~g~~l~ 344 (428)
T PRK07986 271 CLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES-G----DWQQQVAAIEAQLR 344 (428)
T ss_pred Eechhhh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-C----CHHHHHHHHHHHHH
Confidence 5899997 88 5999999999999888642 1334667788888888877763110 1 22333444444444
Q ss_pred HHhccC---CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cC
Q 012124 372 KSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--AS 446 (470)
Q Consensus 372 ~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~ 446 (470)
+.|+++ +.+.-. ...|+++-+.+.+.. ....+.+.|+++ ||.+.+. .+.+|+... .+
T Consensus 345 ~~l~~l~~~~~i~~v-Rg~Gl~~~ve~~~~~-----------~~~~~~~~l~~~-Gl~~~~~-----g~~i~~~Ppl~it 406 (428)
T PRK07986 345 EELAPLRDAPMVADV-RVLGAIGVVETTRPV-----------NMAALQRFFVEQ-GVWIRPF-----GKLIYLMPPYIIL 406 (428)
T ss_pred HHHHHHhcCCCEEeE-eccceEEEEEeCCcc-----------cHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCCCC
Confidence 444443 322111 123555666664321 356777777765 9998773 257999655 49
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012124 447 LTTLQAAVERIKKGLLT 463 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~ 463 (470)
++++++++++|.+++++
T Consensus 407 ~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 407 PEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999999864
No 305
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.76 E-value=1.3e-15 Score=153.19 Aligned_cols=356 Identities=15% Similarity=0.089 Sum_probs=208.6
Q ss_pred hcCCCeEEccCCCCCC--CC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCC-CCcEEEe-cChHH
Q 012124 91 QAGVSVIRLAAGEPDF--DT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-PDQILVS-NGAKQ 165 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~~--~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~i~it-~g~~~ 165 (470)
.+|+.++|+..|.... .. ++.+.+++.+++.+..... ...-..+.+..+++.+......... .+.++++ +++++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH-TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc-ccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 3688899998886433 33 7889999999986432111 1111235555666666543221111 1356564 78999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCCChHHHHHH-cCC------------EEEEecCcCCC--CCc--------cCHHhH
Q 012124 166 SILQAVLAVC-SPG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISE--NFL--------LDPKVL 220 (470)
Q Consensus 166 al~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~--~~~--------~d~~~l 220 (470)
|.+.+++... -.| .+|+...-+|++....... .|. .+..+|..... .++ .+++.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 9999888643 133 6788888899987654332 110 12233332110 000 135677
Q ss_pred hhhccC------CceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCc
Q 012124 221 ESKLTE------KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWER 292 (470)
Q Consensus 221 ~~~l~~------~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~ 292 (470)
++.+.+ ++.+|++...+.-.|. ..+++.++++.++|++| |+++|.||+...|...+... .....+.++
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~~a~e~~gv~PD--- 294 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA-GIPLIVDEIQSGFGRTGKMFAFEHAGIIPD--- 294 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcHHHHHHhcCCCCC---
Confidence 777742 4566666444554566 45799999999999999 99999999999873333210 011122222
Q ss_pred eEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 012124 293 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 372 (470)
Q Consensus 293 ~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (470)
+-+++|.++ .|+++|.+++.+++ +.+.......+++.++++..++.+.|+.-.. ++.+ +..++.-+++.+
T Consensus 295 ---iv~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~-~~l~----~~~~~~G~~l~~ 364 (464)
T PRK06938 295 ---VVVLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE-HRLA----EHAAAMGERLRE 364 (464)
T ss_pred ---EEEeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH-hHHH----HHHHHHHHHHHH
Confidence 445789998 89999999998774 5443323445777899998888888864110 2222 233333333333
Q ss_pred Hhc----cCCCCeecCCCceEEEeeeccCccCCc-ccCCCC--CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee-
Q 012124 373 SFG----ELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA- 444 (470)
Q Consensus 373 ~L~----~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~- 444 (470)
.|+ +.+ +......-|+++.+++....... ...... ......+.+.++++ ||.+.++..+ .+.+|+...
T Consensus 365 ~L~~l~~~~~-~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g~~--~~~l~~~Ppl 440 (464)
T PRK06938 365 HLRQLQRDYP-QLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR-GLILELGGRH--GSVVRFLPPL 440 (464)
T ss_pred HHHHHHHhCC-CeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEECCC
Confidence 333 333 22222244666677763210000 000000 00124566677655 9998875322 367888755
Q ss_pred -cCHHHHHHHHHHHHHHHHhhC
Q 012124 445 -ASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 445 -~~~~~i~~~l~~l~~~l~~~~ 465 (470)
.+++++++++++++++++++.
T Consensus 441 ~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 441 IITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred ccCHHHHHHHHHHHHHHHHHHh
Confidence 499999999999999998653
No 306
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.76 E-value=6.8e-16 Score=153.91 Aligned_cols=340 Identities=13% Similarity=0.039 Sum_probs=211.0
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|. ..+.. ++.+.+++.+++.+..+.. ...-..+....+++.+....+ ...+.+++++++++|.+
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve 118 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIM-FGGFTHEPAVELAQKLLEILP--PSLNKIFFADSGSVAVE 118 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchHHHH
Confidence 677899998874 23333 6889999999887632111 101123444556666654332 23468999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHH-HcCC-------------EEEEecCcCCC---C-CccCHHhHhh
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISE---N-FLLDPKVLES 222 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~-~~g~-------------~~~~v~~~~~~---~-~~~d~~~l~~ 222 (470)
.+++.... +| .+|+....+|++...... ..|- .+..+|..... . ..-+++.+++
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~ 198 (429)
T PRK06173 119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQD 198 (429)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHH
Confidence 98886431 33 578888899988542221 1110 01122221000 0 0014566777
Q ss_pred hcc---CCceEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEE
Q 012124 223 KLT---EKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTV 296 (470)
Q Consensus 223 ~l~---~~~~~i~l~~p-~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i 296 (470)
.+. +++.+|++... +.-.|.. .+++.+++|.++|++| |+++|.||++..+...+... .....+.+ | |
T Consensus 199 ~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~~a~~~~gv~P--D--i-- 271 (429)
T PRK06173 199 LLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY-GVLLIFDEIATGFGRTGKLFALEHAGVVP--D--I-- 271 (429)
T ss_pred HHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc-CCeEEecchhcCCCcCCcchHHHhcCCCC--C--E--
Confidence 774 35667777653 6666764 7899999999999999 99999999997753223211 11112222 2 3
Q ss_pred eccCccccccc-ceeeEEEcCHHHHHHHHH-----HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Q 012124 297 NGFSKAFAMTG-WRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 370 (470)
Q Consensus 297 ~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 370 (470)
.+|+|.++ .| +.++.+++++++.+.+.. .....+++.+++...++.+.|+.- ++ ....+..+++-+.+
T Consensus 272 v~~gK~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i---~~--~~~~~~~~~~g~~l 345 (429)
T PRK06173 272 MCIGKALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLL---LE--SPWQQNIQRIEAQL 345 (429)
T ss_pred EEeehhhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHH
Confidence 34899997 88 489999999999887753 122235567888888888777631 11 12344445555555
Q ss_pred HHHhccCCCCeecC--CCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012124 371 VKSFGELEGVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 446 (470)
Q Consensus 371 ~~~L~~~~g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~ 446 (470)
.+.|+++.+..... ...|+.+-+.+.+.. +...+.+.|+++ ||.+.+.. +.+|+.... +
T Consensus 346 ~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-----------~~~~i~~~l~e~-Gi~v~~~g-----~~l~~~Ppl~it 408 (429)
T PRK06173 346 KQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-----------NMATLQPRFVEH-GIWVRPFG-----KLVYIMPPFIIS 408 (429)
T ss_pred HHHHHHhhcCCCeeeeeccceEEEEEeCCcc-----------cHHHHHHHHHHC-CeEEEecC-----CEEEEeCCccCC
Confidence 55555331222111 123565666765421 456788887765 99997742 588998765 9
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012124 447 LTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~~ 464 (470)
++++++++++|++++++.
T Consensus 409 ~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 409 PDELSQLTSGLLRVLKQE 426 (429)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 307
>PRK07480 putative aminotransferase; Validated
Probab=99.76 E-value=8.5e-16 Score=154.44 Aligned_cols=354 Identities=14% Similarity=0.091 Sum_probs=209.2
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|. ..+.. ++.+.+++.+++.+..+.........+.+..+++.+....+ ...+.+++++++++|.+
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e 125 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEAND 125 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHH
Confidence 577889998875 22333 78899999999876322111112234666677777765443 23468999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CCE------------EEEecCcC--CCCCccC--------H
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DAT------------PVILPTRI--SENFLLD--------P 217 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~~------------~~~v~~~~--~~~~~~d--------~ 217 (470)
.+++.... +| .+|+...-+|++........ |.. +..++... ...+..+ +
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA 205 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence 99886421 33 46888888898865322221 111 11122110 0000001 2
Q ss_pred HhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCC
Q 012124 218 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWE 291 (470)
Q Consensus 218 ~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~ 291 (470)
+.+++.+. +++.+|++...+.-.|. ..+.+.+++|.++|++| |+++|.||++..|.-.+... .....+.++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~a~~~~gv~PD-- 282 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY-DILLVADEVICGFGRTGEWFGSQHFGIKPD-- 282 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcchhhhhhcCCCCC--
Confidence 55554442 35667777555655676 56788899999999999 99999999998763222210 111122222
Q ss_pred ceEEEeccCcccccccc-eeeEEEcCHHHHHHHHH----HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHH-HHHHH
Q 012124 292 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV-KAFRE 365 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~----~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~-~~~~~ 365 (470)
+-+|+|.++ .|+ ++|.+++.+++.+.+.. .....+++.++++..++.+.|+.-.. ++.+++.+ +.-..
T Consensus 283 ----iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~~g~~ 356 (456)
T PRK07480 283 ----LMTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD-EGIVERVRDDTGPY 356 (456)
T ss_pred ----eeeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHH
Confidence 456899998 785 89999999999887731 22345778899999999888864211 12223321 21122
Q ss_pred HHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC-HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee
Q 012124 366 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN-SESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 444 (470)
Q Consensus 366 ~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~ 444 (470)
.++.+.+ +.+.+-+.-. ..-|+++.+++.+.... ......... ...+.+.++++ ||.+.+. .+.+|++..
T Consensus 357 l~~~l~~-l~~~~~i~~v-rG~Glm~gie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----~~~l~~~Pp 427 (456)
T PRK07480 357 LQKRLRE-LADHPLVGEV-RGVGLVGAIELVKDKAT-RERFEAGGGVGTICRDHCFAN-GLIMRAV-----GDRMIISPP 427 (456)
T ss_pred HHHHHHH-hhcCCCeeeE-EeecceEEEEEeccccc-cccCcchhhHHHHHHHHHHHC-CcEEeec-----CCEEEEECC
Confidence 2222332 3333211111 23356566666321000 000000001 13455666655 8988762 257899887
Q ss_pred c--CHHHHHHHHHHHHHHHHhhC
Q 012124 445 A--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 445 ~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
. ++++|++++++|.+++++++
T Consensus 428 l~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 428 LVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 6 99999999999999998764
No 308
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.76 E-value=1.5e-15 Score=152.82 Aligned_cols=336 Identities=16% Similarity=0.086 Sum_probs=201.6
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcC-CCC------CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEE---ecChH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREG-FTR------YTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAK 164 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-~~~------y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~i---t~g~~ 164 (470)
..|+|-..++- .++.+.+++...+.+. ..+ |+...-..++.+...+...+.++. ..+.+++ .++++
T Consensus 35 ~~l~liasen~--~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~--~~~~~~~nv~~~SG~ 110 (475)
T PLN03226 35 KGLELIASENF--TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRL--DPEKWGVNVQPLSGS 110 (475)
T ss_pred cCeeEecCCcc--CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCC--CcceeEEecCcCchH
Confidence 44677666554 4677888888887432 222 222222333433333345555553 3344433 35666
Q ss_pred HHHHHHHHHhcCCCCeEEEcCC---CCCChHHHH---HHcCCEE----EEecCcCCCCCccCHHhHhhhcc-CCceEEEE
Q 012124 165 QSILQAVLAVCSPGDEVIIPAP---FWVSYPEMA---RIADATP----VILPTRISENFLLDPKVLESKLT-EKSRLLIL 233 (470)
Q Consensus 165 ~al~~~~~~l~~~gd~Vlv~~p---~y~~~~~~~---~~~g~~~----~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l 233 (470)
.|...++.+|++|||+|+..+. +|.++.... +..+... +++.++. ++..+|+++|++.+. .++++|++
T Consensus 111 ~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~pklIv~ 189 (475)
T PLN03226 111 PANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRPKLIIA 189 (475)
T ss_pred HHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCCeEEEE
Confidence 7788889999999999998553 333322111 1112221 2344443 345699999999886 46776655
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEE
Q 012124 234 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 234 ~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
. .++ +|...+ +++|.++|+++ |+++++|+++..........++. + ....++++|++|++ +|.+-|++
T Consensus 190 ~-~S~-~s~~~D---~a~i~~ia~~~-ga~LlvD~AH~~Gli~~~~~~~p--~---~~~Div~~t~hK~L--~GP~Gg~I 256 (475)
T PLN03226 190 G-ASA-YPRDWD---YARMRKIADKV-GALLMCDMAHISGLVAAQEAASP--F---EYCDVVTTTTHKSL--RGPRGGMI 256 (475)
T ss_pred e-cCc-CCCccC---HHHHHHHHHHc-CCEEEEEchhhhCcccCCCCCCC--C---CCCeEEEecCcccc--cCCCceEE
Confidence 3 333 677777 67888999999 99999999998644433222211 1 13448899999998 23344888
Q ss_pred EcCHHHH-----------HH---HHHHhh-hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 012124 314 AGPKHFV-----------AA---CNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 378 (470)
Q Consensus 314 ~~~~~~~-----------~~---l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 378 (470)
+++++++ +. +..... .+..++++....++..+++.-. ....++.+++..++.++|.+.|.+.
T Consensus 257 ~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~--~~~~~~~~~~~~~na~~L~~~L~~~- 333 (475)
T PLN03226 257 FFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFKAYQKQVKANAAALANRLMSK- 333 (475)
T ss_pred EEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh--CcCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 8877544 21 221111 1223344444444445555311 1224566788888999999999885
Q ss_pred CCeecCCC-ceEEEeeec-cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----CCCcEEEEee------c
Q 012124 379 GVKMSEPQ-GAFYLFIDF-STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYA------A 445 (470)
Q Consensus 379 g~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~-----~~~~iRls~~------~ 445 (470)
|+.+..+. ....+++++ +..+ +..++.+.| ++.||.+..+...+ .+..+|++.. .
T Consensus 334 G~~l~~~~t~~hi~lv~~~~~gi-----------~~~~~~~~L-~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~ 401 (475)
T PLN03226 334 GYKLVTGGTDNHLVLWDLRPLGL-----------TGSRVEKVL-DLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGL 401 (475)
T ss_pred CCEEEcCCCCCCEEEEEccCCCC-----------CHHHHHHHH-HHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCC
Confidence 88876532 234466777 3332 556666655 56699998764322 2457898533 2
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 012124 446 SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 446 ~~~~i~~~l~~l~~~l~~ 463 (470)
++++|++..+.|.++++.
T Consensus 402 ~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 402 VEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 788999999999888873
No 309
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.76 E-value=1.3e-15 Score=152.84 Aligned_cols=345 Identities=16% Similarity=0.121 Sum_probs=211.7
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+-.+.. ...-..+....+++.|.+..+. ..+.+++++++++|.+
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve 123 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAP-AFQMGHPLAFELAERLAELAPG--GLDHVFFTNSGSESVD 123 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHH
Confidence 57789999888532 333 7889999999987522111 1111234455677777654321 2368999999999999
Q ss_pred HHHHHhcC-------C-CCeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcC---CCCCcc--------C
Q 012124 169 QAVLAVCS-------P-GDEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRI---SENFLL--------D 216 (470)
Q Consensus 169 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~---~~~~~~--------d 216 (470)
.+++.... + ..+|+...-+|++........ |. .+..+|... ...+.. .
T Consensus 124 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (445)
T PRK09221 124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAEL 203 (445)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHH
Confidence 98886431 2 257888888998865432211 10 122232211 000000 1
Q ss_pred HHhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCC
Q 012124 217 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 290 (470)
Q Consensus 217 ~~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~ 290 (470)
.+.+++.+. +++.+|++...+...|. ..+.+.+++|.++|++| |+++|.||++..|...+... .....+.+
T Consensus 204 ~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~~~~~~~~gv~P-- 280 (445)
T PRK09221 204 ADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH-GILLIFDEVITGFGRLGAAFAAERFGVTP-- 280 (445)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCCcCchhhHHHhcCCCC--
Confidence 346666663 34566666555666777 45788999999999999 99999999998753222211 11112222
Q ss_pred CceEEEeccCccccccc-ceeeEEEcCHHHHHHHHH-------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 291 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 291 ~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
| +-+|+|.++ .| +++|.+++++++++.+.. .....+++.+++...++.+.|+.- ++ ..+.++
T Consensus 281 D----i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i---~~--~~l~~~ 350 (445)
T PRK09221 281 D----IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIY---RE--EDLFER 350 (445)
T ss_pred C----EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHH---Hh--ccHHHH
Confidence 2 457899997 67 689999999999887643 122346678888888887777641 11 133455
Q ss_pred HHHHHHHHHHHhccCCCCee--cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012124 363 FRERRDFLVKSFGELEGVKM--SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 440 (470)
Q Consensus 363 ~~~~~~~l~~~L~~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iR 440 (470)
.++.-+++.+.|+++.+... ....-|+.+.+++..... ........+.+.++++ ||.+.++ .+.+|
T Consensus 351 ~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~------~~~~~~~~~~~~~~~~-Gv~~~~~-----~~~lr 418 (445)
T PRK09221 351 AAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPG------APGARGYEAFMKCFEK-GLLVRYT-----GDTIA 418 (445)
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccc------cccchHHHHHHHHHHC-CeEEeec-----CCEEE
Confidence 55666666666655422111 111235555555532100 0001245677777765 8998764 25799
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 441 ISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 441 ls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
++... ++++|++++++|+++++++
T Consensus 419 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 419 LSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHhh
Confidence 98654 9999999999999998764
No 310
>PRK12403 putative aminotransferase; Provisional
Probab=99.76 E-value=1.9e-15 Score=152.24 Aligned_cols=353 Identities=12% Similarity=0.040 Sum_probs=206.3
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. +|.+.+++.+++.+.........+..+....+++.+....+. ..+.+++++++++|.+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~e 129 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPG--HYSHAIYTNSGSEANE 129 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHHHH
Confidence 5778899887742 2333 789999999998763221111123455666677777654431 2368999999999999
Q ss_pred HHHHHhc-------CCCCe-EEEcCCCCCChHHH-HHHcCCE-----------EEEecCcC--CCCCcc--------CHH
Q 012124 169 QAVLAVC-------SPGDE-VIIPAPFWVSYPEM-ARIADAT-----------PVILPTRI--SENFLL--------DPK 218 (470)
Q Consensus 169 ~~~~~l~-------~~gd~-Vlv~~p~y~~~~~~-~~~~g~~-----------~~~v~~~~--~~~~~~--------d~~ 218 (470)
.+++... ++++. |+...-+|++.... +...|.+ +..+|... ..++.. +.+
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9998763 23333 44556688876432 2222221 22222110 000011 134
Q ss_pred hHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCce
Q 012124 219 VLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 293 (470)
Q Consensus 219 ~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (470)
.+++.+. +++.+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..|.-.+... ....+.- ...
T Consensus 210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~~-a~e~~gv-~PD- 285 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY-DVLLCADEVIGGFGRTGEWF-AHEHFGF-EPD- 285 (460)
T ss_pred HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchhh-hhhhcCC-CCC-
Confidence 5555542 34556666555666676 45789999999999999 99999999998763323211 1111111 111
Q ss_pred EEEeccCcccccccc-eeeEEEcCHHHHHHHHHH----hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHH-HHHHHHH
Q 012124 294 LTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV-KAFRERR 367 (470)
Q Consensus 294 i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~-~~~~~~~ 367 (470)
|+ +|+|.++ .|+ .+|.+++.+++.+.+... ....+++.+++...++.+.|+.-.. +..+++.+ +.-...+
T Consensus 286 iv--~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~-~~l~~~~~~~~g~~l~ 361 (460)
T PRK12403 286 TL--SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD-EGVVTRVKDDTGPYLQ 361 (460)
T ss_pred eE--EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHH
Confidence 33 4899998 885 999999999988877421 1234667889998888888864111 22233332 2222233
Q ss_pred HHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCC----HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe
Q 012124 368 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN----SESLCRYLLDKAQVALVPGDAFGDDTCIRISY 443 (470)
Q Consensus 368 ~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~ 443 (470)
+.|.+...+.+ +......-|+++.+++..... . ...... ...+...++++ ||.+.+. .+.+|++.
T Consensus 362 ~~L~~l~~~~~-~i~~vrG~Gl~~gie~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----~~~~~l~P 430 (460)
T PRK12403 362 RCLREVFGDHP-LVGEVQGAGLVAALQFAEDKA---T-RKRFANENDLAWRCRTIGFEE-GVIIRST-----LGRMIMAP 430 (460)
T ss_pred HHHHHHHhcCC-CEEeEeecceEEEEEEccCcc---c-cccccchhHHHHHHHHHHHhC-CEEEEec-----CCEEEEEC
Confidence 33333333342 222222345656666632100 0 000001 12344445555 8998753 14588887
Q ss_pred ec--CHHHHHHHHHHHHHHHHhhC
Q 012124 444 AA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 444 ~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
.. ++++++++++.|+++++++.
T Consensus 431 pl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 431 ALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999998874
No 311
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=1.6e-15 Score=151.01 Aligned_cols=338 Identities=14% Similarity=0.074 Sum_probs=209.3
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+.. ...-..+....+++.+.+..+. .-+.+++++++++|.+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~e 114 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVM-FGGLTHEPAIKLTRKLLNLTDN--GLDHVFYSDSGSVSVE 114 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHHHHHHHHHhhCCC--CcCEEEEeCCcHHHHH
Confidence 67788999888533 333 7899999999987632111 0001234455666666543321 2368999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcCCCCCc-cC----HHhHh
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISENFL-LD----PKVLE 221 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~-~d----~~~l~ 221 (470)
.+++.... ++ .+|+....+|++....+... +. ....+|........ -+ .+.++
T Consensus 115 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 194 (422)
T PRK05630 115 VAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLE 194 (422)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHH
Confidence 98886431 23 57888899999865433221 21 11223322110000 01 24455
Q ss_pred hhccCCceEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEec
Q 012124 222 SKLTEKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNG 298 (470)
Q Consensus 222 ~~l~~~~~~i~l~~-p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S 298 (470)
+.+.+++.+|++.. .+.-.|. ..+.+.+++|.++|++| |+++|.||++..+...+.... ......++ +-+
T Consensus 195 ~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~-g~llI~DEv~tG~GrtG~~~a~~~~gv~PD------i~t 267 (422)
T PRK05630 195 LLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH-DILLIADEIATGFGRTGELFATLAAGVTPD------IMC 267 (422)
T ss_pred HHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEecceeCCCcCchhhHHHhcCCCCC------eee
Confidence 55556777777765 3666776 56788999999999999 999999999987633222110 11122221 337
Q ss_pred cCccccccc-ceeeEEEcCHHHHHHHHHH------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 012124 299 FSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 371 (470)
Q Consensus 299 ~sK~~~~~G-~r~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (470)
|+|.++ .| ..+|++++++++.+.+... ....+++.+++...++.+.|+.-.. +...+ ..+++-+++.
T Consensus 268 ~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~-~~~~~----~~~~~g~~l~ 341 (422)
T PRK05630 268 VGKALT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET-GMWRK----QVKRIEAELI 341 (422)
T ss_pred eechhh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh-CcHHH----HHHHHHHHHH
Confidence 899997 77 5899999999998887531 2235667888888888887764111 12222 3333334444
Q ss_pred HHhcc---CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012124 372 KSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 446 (470)
Q Consensus 372 ~~L~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~ 446 (470)
+.|++ .+.+.-.. .-|+++-+.+.+.. +...+.+.++++ ||.+.+. .+.+|+.... +
T Consensus 342 ~~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~-----------~~~~~~~~~~~~-Gl~~~~~-----g~~l~~~PpL~it 403 (422)
T PRK05630 342 AGLSPLAHLPGVADVR-VLGAIGVVEMEQPV-----------DMEEATQAAVDH-GVWLRPF-----GRLVYVMPPYITT 403 (422)
T ss_pred HHHHHhhcCCCeeeee-ccccEEEEEECCcc-----------cHHHHHHHHHHC-CeEEEec-----CCEEEEECCccCC
Confidence 43433 33322111 23565667775321 355777777765 9998763 2578888764 9
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012124 447 LTTLQAAVERIKKGLLT 463 (470)
Q Consensus 447 ~~~i~~~l~~l~~~l~~ 463 (470)
++++++++++|+++++.
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998864
No 312
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=2.6e-15 Score=151.07 Aligned_cols=348 Identities=14% Similarity=0.116 Sum_probs=208.7
Q ss_pred cCCCeEEccCC-CCCCC-ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHH
Q 012124 92 AGVSVIRLAAG-EPDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 169 (470)
Q Consensus 92 ~~~~~i~l~~g-~~~~~-~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~ 169 (470)
+|+.+||+..+ ...+. .+|.+.+++.+++.+... ....-..+....+++.+.+..+. ..+.+++++++++|.+.
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGseAve~ 145 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRFTNETAIECAEKLTEIAGG--ELNRVLFAPGGTSAIGM 145 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCC--ccCccCCHHHHHHHHHHHHhCCC--CCCEEEECCCcHHHHHH
Confidence 67789998733 12233 378899999999875322 11112245666777777665431 23689999999999999
Q ss_pred HHHHhc--CCCCeEEEcCCCCCChHHH-HHHcCCE------------EEEecCcCC--CCCc-c------CHHhHhhhcc
Q 012124 170 AVLAVC--SPGDEVIIPAPFWVSYPEM-ARIADAT------------PVILPTRIS--ENFL-L------DPKVLESKLT 225 (470)
Q Consensus 170 ~~~~l~--~~gd~Vlv~~p~y~~~~~~-~~~~g~~------------~~~v~~~~~--~~~~-~------d~~~l~~~l~ 225 (470)
+++... ....+|+...-+|++.... +...|.. +..+|.... ..+. . +++.+++.+.
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 225 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIE 225 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHh
Confidence 888642 2236788888889887532 2222221 122221100 0000 0 1345777664
Q ss_pred --CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCCCCCceEEEeccCcc
Q 012124 226 --EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 226 --~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~S~sK~ 302 (470)
+++.+|++...++..+...+++.+++|.++|++| |+++|.||++..|...+.... ....+.+ | |+ +|+|.
T Consensus 226 ~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~fa~e~~gv~P--D--iv--~~gKg 298 (459)
T PRK06082 226 KEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH-NVLLIIDEIPNGMGRTGEWFTHQAYGIEP--D--IL--CIGKG 298 (459)
T ss_pred cCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchhhHhHhhCCCC--C--EE--Eeccc
Confidence 3455666654566556678889999999999999 999999999987633332100 1112222 2 22 48999
Q ss_pred ccccc-ceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc----C
Q 012124 303 FAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----L 377 (470)
Q Consensus 303 ~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 377 (470)
++ .| +.+|.+++++++...........+++.++++..++.+.|+.- ++ +.+.+..+++-+++.+.|++ .
T Consensus 299 l~-gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l---~~--~~l~~~~~~~g~~l~~~L~~l~~~~ 372 (459)
T PRK06082 299 LG-GGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVI---EQ--EGLLEKVKADSQFMRERLLEMKAKY 372 (459)
T ss_pred cc-CCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 98 78 599999999887644321111257778999888888877641 11 12334444444444444443 3
Q ss_pred CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHH
Q 012124 378 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVE 455 (470)
Q Consensus 378 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~ 455 (470)
+ +......-|+++.+++...... ..........+...++++ ||.+.+. ..+.+|++... ++++|+++++
T Consensus 373 ~-~i~~vrG~Gl~~~ve~~~~~~~---~~~~~~~~~~~~~~~~~~-Gvl~~~~----~~~~i~~~Ppl~it~~eid~~~~ 443 (459)
T PRK06082 373 P-LIGDVRGIGLLWGVELVTDRHT---KERAYDEAEAVLYRCLNN-GLSFKVS----QGNVIQLSPPLIITREELTQALA 443 (459)
T ss_pred C-CeeeeeeccceeEEEEccCccc---cCccHHHHHHHHHHHHhC-CCEEEec----CCCEEEEeCCCccCHHHHHHHHH
Confidence 2 2111123356566676421000 000000134566666655 9988763 13679998654 9999999999
Q ss_pred HHHHHHHhhC
Q 012124 456 RIKKGLLTLR 465 (470)
Q Consensus 456 ~l~~~l~~~~ 465 (470)
++++++.++.
T Consensus 444 ~l~~~l~~~~ 453 (459)
T PRK06082 444 ILEEAIAKIC 453 (459)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 313
>PRK07036 hypothetical protein; Provisional
Probab=99.75 E-value=3e-15 Score=150.92 Aligned_cols=350 Identities=13% Similarity=0.094 Sum_probs=209.8
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. +|.+.+++.+++.+..+.........+.+..+++.+..... ...+.+++++++++|.+
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve 126 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAP--GDLNHVFLTTGGSTAVD 126 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHH
Confidence 67789999888532 333 78899999999876321111001224566777777765432 22368999999999999
Q ss_pred HHHHHhc------C-CC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCC--CCCccC--------H
Q 012124 169 QAVLAVC------S-PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRIS--ENFLLD--------P 217 (470)
Q Consensus 169 ~~~~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~~d--------~ 217 (470)
.+++... . +| .+|+...-+|++....+... |. .+..++.... ..++.+ +
T Consensus 127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07036 127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV 206 (466)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence 9988642 1 22 67888888999876443221 11 1222222110 011111 2
Q ss_pred HhHhhhcc----CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccc---ccccCCC
Q 012124 218 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS---FASLPGM 289 (470)
Q Consensus 218 ~~l~~~l~----~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~---~~~~~~~ 289 (470)
+.+++.+. +++.+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..|...+.. .. ...+.++
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~~~~~~~gv~PD 284 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY-DILYISDEVVTGFGRLGHF-FASEAVFGIQPD 284 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCCcCchh-hhhhhhcCCCCC
Confidence 33444442 35667777555666676 56889999999999999 9999999999876322211 11 1122222
Q ss_pred CCceEEEeccCccccccc-ceeeEEEcCHHHHHHHHHH-------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHH
Q 012124 290 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 361 (470)
Q Consensus 290 ~~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 361 (470)
+-+|+|.++ .| +++|.+++++++.+.+... ....+++.+++...++.+.|+.-.. + .+.+
T Consensus 285 ------ivt~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~-~----~l~~ 352 (466)
T PRK07036 285 ------IITFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER-E----GLCE 352 (466)
T ss_pred ------EEEEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh-C----CHHH
Confidence 456899998 88 5999999999998877531 2234667899998888888764110 1 2223
Q ss_pred HHHHHHHHHHHHhc---cCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012124 362 AFRERRDFLVKSFG---ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 438 (470)
Q Consensus 362 ~~~~~~~~l~~~L~---~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~ 438 (470)
..++.-+++.+.|+ +.+-+ .....-|+++.+++.+.................+...++++ ||.+.+.. +.
T Consensus 353 ~~~~~g~~l~~~L~~l~~~~~v-~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~-----~~ 425 (466)
T PRK07036 353 HVREVGPYFEERLASLRELPLV-GDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER-GLLVRPLE-----HL 425 (466)
T ss_pred HHHHHHHHHHHHHHHhccCCCE-EEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC-CcEEeecC-----CE
Confidence 33333333434433 33222 11223456667777432100000000000134566666665 99987631 46
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 439 IRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 439 iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
+|++... ++++|++++++|.++++++
T Consensus 426 ~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 426 CVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred EEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 8888554 9999999999999988765
No 314
>PRK07483 hypothetical protein; Provisional
Probab=99.74 E-value=2.9e-15 Score=150.14 Aligned_cols=359 Identities=11% Similarity=0.091 Sum_probs=211.9
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+... +....-..+....+++.+....+ -..+.+++++++++|.+
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve 104 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY-AHTSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVE 104 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHH
Confidence 6778999998853 3333 78899999999876321 11111123555667777765432 12368999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHH-cCCE------------EEEecCcCC-CCC--cc--------C
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADAT------------PVILPTRIS-ENF--LL--------D 216 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~-~~~--~~--------d 216 (470)
.+++.... +| .+|+...-+|++....... .|-. +..++.... ... .. .
T Consensus 105 ~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (443)
T PRK07483 105 AALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRL 184 (443)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHH
Confidence 99886431 33 5688888899887643322 1111 112221100 000 00 0
Q ss_pred HHhHhhhcc----CCceEEEEcCCCC-Ccc-cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc--cccCC
Q 012124 217 PKVLESKLT----EKSRLLILCSPSN-PTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF--ASLPG 288 (470)
Q Consensus 217 ~~~l~~~l~----~~~~~i~l~~p~n-PtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~--~~~~~ 288 (470)
++.+++.+. +++.+|++...+. -.| ...+++.+++|.++|++| |+++|.||++..|...+. .... ..+.+
T Consensus 185 ~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~-gillI~DEV~tGfGRtG~-~~a~~~~gv~P 262 (443)
T PRK07483 185 ADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY-GVLLILDEVMCGMGRTGT-LFACEEDGVAP 262 (443)
T ss_pred HHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh-CCEEEEecceeCcccCcH-HHHHhhcCCCC
Confidence 245665552 3566777654453 235 467889999999999999 999999999988633321 1111 12222
Q ss_pred CCCceEEEeccCcccccccc-eeeEEEcCHHHHHHHHHH----hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
+ +-+++|.++ .|+ ++|.+++++++.+.+... ....+++.++++..++.+.|+.-.. ++.+++.++.=
T Consensus 263 D------iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~-~~l~~~~~~~g 334 (443)
T PRK07483 263 D------LVTIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE-DGLLANVRARG 334 (443)
T ss_pred C------eeeehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 2 445799998 896 999999999998877532 2335677899998888888763111 22233333322
Q ss_pred HHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCC-C-C-CCCcE
Q 012124 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDA-F-G-DDTCI 439 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gI~v~pg~~-f-~-~~~~i 439 (470)
+..++.|.+.+++.+.+.-. ..-|+++-+++.+..... ..... ......+.+.++++ ||.+.+... . + .++.+
T Consensus 335 ~~l~~~L~~l~~~~~~i~~v-RG~Glm~gie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~~~~~~~l 411 (443)
T PRK07483 335 EQLRARLRERLGQHPHVGDI-RGRGLFVGVELVADRATK-APFDPALKLHARIKREAMAR-GLMVYPMGGTIDGVRGDHV 411 (443)
T ss_pred HHHHHHHHHHHhcCCCeeeE-eecccEEEEEEeeccccc-CCCCchhhHHHHHHHHHHHC-CcEEEecCccccCCCCCEE
Confidence 22333333333334322111 233555556653210000 00000 00124577777765 999876421 1 1 13689
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012124 440 RISYAA--SLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 440 Rls~~~--~~~~i~~~l~~l~~~l~~~~~ 466 (470)
|+.... +++++++++++|+++++++..
T Consensus 412 ~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 412 LLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 997664 999999999999999987654
No 315
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=4.5e-15 Score=147.83 Aligned_cols=213 Identities=13% Similarity=0.167 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCcC
Q 012124 134 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRI 209 (470)
Q Consensus 134 ~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~ 209 (470)
..+++.++++. |. .+.|++++|+ .++.+++..++++||+|++.+..|.+.. ..++..|++++.++ ++
T Consensus 72 ~~le~~la~l~----g~---~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~ 142 (437)
T PRK05613 72 EALENRIASLE----GG---VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP 142 (437)
T ss_pred HHHHHHHHHHh----CC---CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC
Confidence 44555555553 42 2345555555 8888888888999999999999998874 34577899999987 21
Q ss_pred CCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCC
Q 012124 210 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 289 (470)
Q Consensus 210 ~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~ 289 (470)
.|++.+++++++++++|++.++.||+|.+.+ +++|+++|+++ |+++|+|.+++.... ..++ .
T Consensus 143 -----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~-gi~livD~t~a~g~~----~~p~-~---- 204 (437)
T PRK05613 143 -----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRN-QVPLIVDNTIATAAL----VRPL-E---- 204 (437)
T ss_pred -----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCeEEEECCCccccc----cChH-H----
Confidence 2789999999999999999999999999999 88999999999 999999999864211 1111 1
Q ss_pred CCceEEEeccCcccccccceeeE-EEcCHHH-----------------------------------H-HHHHHHhhhccC
Q 012124 290 WERTLTVNGFSKAFAMTGWRLGY-IAGPKHF-----------------------------------V-AACNKIQSQFTS 332 (470)
Q Consensus 290 ~~~~i~i~S~sK~~~~~G~r~G~-~~~~~~~-----------------------------------~-~~l~~~~~~~~~ 332 (470)
.+-.+++.|++|.++-.|.-+|- ++...++ . +...........
T Consensus 205 ~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 205 LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 24469999999998634544444 4432110 0 111223334455
Q ss_pred CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 333 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 333 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
+.+++....+..-|+ -+.-+.++..++...+.+.|++.|.+
T Consensus 285 ~~~p~~a~l~~rgl~-------TL~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 285 TLSPFNAWVTAQGLD-------TLSLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred CCCHHHHHHHHcccC-------cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 666665444333332 23444455567777788888877654
No 316
>PRK04311 selenocysteine synthase; Provisional
Probab=99.74 E-value=1.2e-14 Score=145.28 Aligned_cols=318 Identities=19% Similarity=0.159 Sum_probs=197.0
Q ss_pred ChHHHHHHHHHHHHcCC-CCCCCC---cC--cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 012124 108 TPVLIAEAGINAIREGF-TRYTPN---AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 181 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~-~~y~~~---~g--~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~V 181 (470)
.++.+.+++.+.+.... ..|.-. .| +..+++.+++++ | .+..+++++++.|+.+++.+ +.+||+|
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~----G----ae~a~vv~sgtaAl~l~l~~-l~~GdeV 168 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT----G----AEDALVVNNNAAAVLLALNA-LAAGKEV 168 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHH-hCCCCEE
Confidence 47889999988876531 222111 12 235566666654 4 24677888888999988866 4799999
Q ss_pred EEcCCCCCC------hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCC--cc--cCCCHHHHHH
Q 012124 182 IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP--TG--SVYPKNLLDE 251 (470)
Q Consensus 182 lv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nP--tG--~~~s~~~~~~ 251 (470)
++.+..+.. ....++..|++++.++.+. ..+++++++++++++++|++.+++|| +| ...+ +++
T Consensus 169 Ivs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d---l~e 241 (464)
T PRK04311 169 IVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS---LAE 241 (464)
T ss_pred EEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---HHH
Confidence 998764431 2245678899999998642 14789999999999999999999998 34 4556 899
Q ss_pred HHHHHHhCCCEEEEEecccccc----ccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh
Q 012124 252 IARIVAKHPRLLVLSDEIYEHI----IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 327 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~----~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~ 327 (470)
|+++|++| |+++|+|...+.+ .|+-...+.+..... .+-.+++.|.+|.+|-| ..|++++.+++++.+++..
T Consensus 242 I~~lak~~-gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~ 317 (464)
T PRK04311 242 LAALGKEH-GLPVVYDLGSGSLVDLSQYGLPDEPTVQELLA-AGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHP 317 (464)
T ss_pred HHHHHHHc-CCeEEEECCCcccccchhccCCCCCchhhHHh-cCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhch
Confidence 99999999 9999999964432 121111122222111 35569999999998523 5899999999998776321
Q ss_pred hhccCCCChHHHHHHHHHHh----cCCC-----ChHHHHHHHHHHHHHHHHHHHHhccCC--CC--eecCC---------
Q 012124 328 SQFTSGASSISQKAGVAALG----LGYA-----GGEVVSKMVKAFRERRDFLVKSFGELE--GV--KMSEP--------- 385 (470)
Q Consensus 328 ~~~~~~~~~~~q~a~~~~l~----~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~--g~--~~~~~--------- 385 (470)
..-..-.......++.+.|. .... ..+.+....+..+++.+.+.+.|+..+ ++ ++...
T Consensus 318 ~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~ 397 (464)
T PRK04311 318 LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSL 397 (464)
T ss_pred hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCC
Confidence 11111122333333333332 1000 001122233555667777788887643 22 33321
Q ss_pred -C---ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHc-CCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHH
Q 012124 386 -Q---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-AQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKK 459 (470)
Q Consensus 386 -~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~gI~v~pg~~f~~~~~iRls~~~-~~~~i~~~l~~l~~ 459 (470)
. ..+-+-++... .+..++.++|.+- --|..+- .++.+.|.+.+ .+++++..+++|.+
T Consensus 398 p~~~~~~~~v~~~~~~------------~~~~~l~~~lr~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~ 460 (464)
T PRK04311 398 PVDRLPSAAVTLTPKD------------RSLEALAARLRLLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLE 460 (464)
T ss_pred cCCCCCeEEEEEeCCC------------CCHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 1 12222222221 1678888877532 1243331 35788888888 88899999999988
Q ss_pred HHH
Q 012124 460 GLL 462 (470)
Q Consensus 460 ~l~ 462 (470)
++.
T Consensus 461 ~~~ 463 (464)
T PRK04311 461 ALN 463 (464)
T ss_pred Hhh
Confidence 764
No 317
>PLN02271 serine hydroxymethyltransferase
Probab=99.74 E-value=5.7e-15 Score=146.43 Aligned_cols=337 Identities=15% Similarity=0.086 Sum_probs=211.7
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcC-C------CCCCCCcCcHHHHHHHHHHHHHHcCCCCCC--CcEEEecChHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREG-F------TRYTPNAGTLELRSAICHKLKEENGLSYTP--DQILVSNGAKQ 165 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-~------~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~--~~i~it~g~~~ 165 (470)
..|.|-..++- +++.+.+++...+.+. . ..|+..+...++.....++..+.||.+... -||-.- +++.
T Consensus 149 ~~l~LIASEN~--~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~ 225 (586)
T PLN02271 149 KGIELIASENF--VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTS 225 (586)
T ss_pred cCeeecccccc--CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHH
Confidence 34566555443 3566777766666542 1 223333444566666667777778754321 355555 5556
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHH---------HHcCCEE--EEecCcCCCCCccCHHhHhh-hccCCceEEEE
Q 012124 166 SILQAVLAVCSPGDEVIIPAPFWVSYPEMA---------RIADATP--VILPTRISENFLLDPKVLES-KLTEKSRLLIL 233 (470)
Q Consensus 166 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---------~~~g~~~--~~v~~~~~~~~~~d~~~l~~-~l~~~~~~i~l 233 (470)
|...++.+|++|||+|+..+..+.++.... ...|..+ ++++++.+ ...+|.|++++ +...++|+|++
T Consensus 226 AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 226 ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCCeEEEE
Confidence 777788999999999999888777665422 3345444 44445433 34599999998 55779999988
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEE
Q 012124 234 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 234 ~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
..-.|| ..++ ++++.++|+++ |+++++|.++......+...++.. ....++.+|.+|++ .|-|-|.+
T Consensus 305 g~Sayp--r~~D---~~~i~eIAdev-GA~LmvD~AH~aGLIa~g~~~sP~-----~~aDvvt~TTHKtL--rGPrGG~I 371 (586)
T PLN02271 305 GGSSYP--REWD---YARFRQIADKC-GAVLMCDMAHISGLVAAKECVNPF-----DYCDIVTSTTHKSL--RGPRGGII 371 (586)
T ss_pred Cchhcc--CcCC---HHHHHHHHHHc-CCEEEEECcccccccccCcCCCCC-----cCCcEEEeCCcccC--CCCCceEE
Confidence 777788 5677 77888889999 999999999986444332222111 12348999999998 56677888
Q ss_pred EcCHH--------------------HHHHHHHHhhhc-cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 012124 314 AGPKH--------------------FVAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 372 (470)
Q Consensus 314 ~~~~~--------------------~~~~l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (470)
+..++ +.+++.+...+. ..++......+.+.++..... .++ +...++..++.+.|.+
T Consensus 372 ~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~-~ef-k~Ya~QVv~NAkaLA~ 449 (586)
T PLN02271 372 FYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVAT-PEY-KAYMQQVKKNAQALAS 449 (586)
T ss_pred EecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhC-hHH-HHHHHHHHHHHHHHHH
Confidence 87542 445555443332 122222223333344442111 233 5666667778888888
Q ss_pred HhccCCCCeecCC-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----CCCcEEEEeec-
Q 012124 373 SFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYAA- 445 (470)
Q Consensus 373 ~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~-----~~~~iRls~~~- 445 (470)
.|.+. |+++... ..+..+|+++... + -.-..+++++++.||.+.--..++ .++.|||....
T Consensus 450 ~L~~~-G~~vv~ggTdnHlvLvDl~~~-g----------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~al 517 (586)
T PLN02271 450 ALLRR-KCRLVTGGTDNHLLLWDLTTL-G----------LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAM 517 (586)
T ss_pred HHHHC-CCeEeeCCCCcceeeecCccc-C----------CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHH
Confidence 88877 8876532 3356678888542 1 133455667788899885433332 24689998653
Q ss_pred -----CHHHHHHHHHHHHHHHH
Q 012124 446 -----SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 446 -----~~~~i~~~l~~l~~~l~ 462 (470)
.++++++..+-|.++++
T Consensus 518 T~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 518 TSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HhcCCCcHHHHHHHHHHHHHHh
Confidence 56888888777777765
No 318
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=4.9e-15 Score=149.24 Aligned_cols=349 Identities=12% Similarity=0.055 Sum_probs=212.1
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|... +.. ++.+.+++.+++.+..+.. ...-..+.+..+++.+....+ ...+.+++++++++|.+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve 121 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVI-LAGFSHEPVIELSERLVKITP--PGLSRCFYADNGSSAIE 121 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHH
Confidence 57788999888532 333 7889999999987632111 111123556667777765332 13368999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCCC--CCcc--------CH
Q 012124 169 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE--NFLL--------DP 217 (470)
Q Consensus 169 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~~--------d~ 217 (470)
.+++... .+| .+|+...-+|++....+... |. .+..+|..... .++. ++
T Consensus 122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l 201 (466)
T PRK07030 122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMF 201 (466)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHH
Confidence 9988752 123 57888889999876443322 21 12222221100 0001 24
Q ss_pred HhHhhhcc---CCceEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCC
Q 012124 218 KVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWE 291 (470)
Q Consensus 218 ~~l~~~l~---~~~~~i~l~~-p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~ 291 (470)
+.+++.+. +++.+|++.. .+.-.|. ..+++.+++|.++|++| |+++|.||++..|...+... .....+.++
T Consensus 202 ~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~TGfGRtG~~~a~~~~gv~PD-- 278 (466)
T PRK07030 202 AHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY-GVHLIHDEIAVGFGRTGTMFACEQAGIRPD-- 278 (466)
T ss_pred HHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCccccchHHHhcCCCCC--
Confidence 55677664 3566676654 3555565 66889999999999999 99999999998864333211 111122222
Q ss_pred ceEEEeccCccccccc-ceeeEEEcCHHHHHHHHH-------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 292 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
+-+|+|.++ .| +++|.+++++++.+.+.. .....+++.+++...++.+.|+.-.. ++ +.++.
T Consensus 279 ----iv~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~-~~----l~~~~ 348 (466)
T PRK07030 279 ----FLCLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ-DN----VIENN 348 (466)
T ss_pred ----EEeeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh-cC----HHHHH
Confidence 445789998 89 599999999999887742 12345667899998888888764111 22 22333
Q ss_pred HHHHHHHHHHhcc---CCCCeecCCCceEEEeeeccCccCCcccCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012124 364 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCI 439 (470)
Q Consensus 364 ~~~~~~l~~~L~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~i 439 (470)
++.-+++.+.|++ .+.+.-. ..-|+++.+++...... ..... .......+.++++++ ||.+.+. .+.+
T Consensus 349 ~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~~~~~-~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-----g~~i 420 (466)
T PRK07030 349 RALARRMAEATAHLADHPHVAEV-RQTGMILAIEMVQDKAS-KTPYPWQERRGLKVYQHALER-GALLRPL-----GSVV 420 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEe-EeceeEEEEEeccCccc-cccCcchhHHHHHHHHHHHHC-CeEEEec-----CCEE
Confidence 3333444444433 3322212 23466666666321000 00000 000123567777765 9998763 2478
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhh
Q 012124 440 RISYA--ASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 440 Rls~~--~~~~~i~~~l~~l~~~l~~~ 464 (470)
|+... .++++|++++++|+++++++
T Consensus 421 ~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 421 YFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 88655 49999999999999999886
No 319
>PLN03032 serine decarboxylase; Provisional
Probab=99.73 E-value=1.4e-15 Score=147.87 Aligned_cols=288 Identities=15% Similarity=0.110 Sum_probs=196.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012124 132 GTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPT 207 (470)
Q Consensus 132 g~~~lr~~ia~~l~~~~g~~~~~~~i--~it~g~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 207 (470)
...++.+.+.+++.+.+|. +++++ ++|+|+++++...+.... .++..|++..-.|++....++.+|.++..||+
T Consensus 63 ~a~~~e~~v~~~ia~llg~--~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~ 140 (374)
T PLN03032 63 HSRQFEVGVLDWFARLWEL--EKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT 140 (374)
T ss_pred cHHHHHHHHHHHHHHHhCC--CCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee
Confidence 4577888888888888884 56666 999999999988777643 35568999999999999999999999999998
Q ss_pred cCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-----EEEEEeccccccccCCCC
Q 012124 208 RISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-----LLVLSDEIYEHIIYAPAT 279 (470)
Q Consensus 208 ~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~-----~~iI~Dd~~~~~~~~~~~ 279 (470)
+.+ +.+|++.|++++++ ++.+++++..+|+||.+-| +++|+++|+++ + +|+.+|.+|+.+...-..
T Consensus 141 d~~--g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~-g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 141 LPS--GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL-GYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred CCC--CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh-CCCCCCeeEEEEccchhhhhhccC
Confidence 754 45999999999976 4667777888999999999 88889999998 6 599999999764321000
Q ss_pred cccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhc-----cCCCCh--HHHHHHHHHHhcCCCC
Q 012124 280 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-----TSGASS--ISQKAGVAALGLGYAG 352 (470)
Q Consensus 280 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-----~~~~~~--~~q~a~~~~l~~~~~~ 352 (470)
..+..++. ..-.-+..|.+|.++ ....+|.++..++.++.+.....+. +...+. .....+...|.. ++
T Consensus 215 ~~~~~~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~--~G 289 (374)
T PLN03032 215 RAPEVTFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRR--KG 289 (374)
T ss_pred CCcccCCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHH--hC
Confidence 01111121 123356678899886 4467899998887766543211111 122222 222333333332 24
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCee-cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC
Q 012124 353 GEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 431 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~ 431 (470)
.+.++++.+...+..+++.+.|++. ++.+ ..|.... +.++.|. ... +.+ |-.+.+
T Consensus 290 ~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~-V~f~~~~--------------~~~----~~~--~w~l~~-- 345 (374)
T PLN03032 290 YRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSST-VVFERPM--------------DEA----FIK--KWQLAC-- 345 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceE-EEEcCCC--------------cHh----Hhh--eeeecc--
Confidence 5677788888888999999999886 6654 4555554 4445442 111 222 444433
Q ss_pred CCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012124 432 AFGDDTCIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 432 ~f~~~~~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
..+++|+.++. +.+.++++++.|++
T Consensus 346 ---~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 346 ---EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ---cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 12489999886 77889998888765
No 320
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=5.9e-15 Score=148.70 Aligned_cols=350 Identities=12% Similarity=0.103 Sum_probs=211.6
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|.. .+.. +|.+.+++.+++.+-.+.. ...-..+....+++.+.+..+ ...+.+++++++++|.+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve 130 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHST-LLGLANVPSILLAEKLIEVVP--EGLKKVFYSDSGATAVE 130 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcc-ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHH
Confidence 6788999988753 2333 7889999999987622111 111123455666666665433 12368999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCC--CCCc--------cCH
Q 012124 169 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRIS--ENFL--------LDP 217 (470)
Q Consensus 169 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~--------~d~ 217 (470)
.+++... .+| .+|+...-+|++....+... |. .+..+|.... ..++ -++
T Consensus 131 ~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~ 210 (460)
T PRK06916 131 IAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHL 210 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHH
Confidence 9988653 233 67888899999866433322 21 1222322100 0000 135
Q ss_pred HhHhhhcc---CCceEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCC
Q 012124 218 KVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWE 291 (470)
Q Consensus 218 ~~l~~~l~---~~~~~i~l~~-p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~ 291 (470)
+.+++.++ +++.+|++.. .+.-.|. ..+++.+++|.++|++| |+++|.||++..|...+... .....+.+ |
T Consensus 211 ~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~TG~GRtG~~~a~~~~gv~P--D 287 (460)
T PRK06916 211 EELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY-NVLFITDEVATGFGRTGKMFACEHENVTP--D 287 (460)
T ss_pred HHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCcCchhhHHHhcCCCC--C
Confidence 56677664 4566777755 4665676 46999999999999999 99999999998763222210 01112222 1
Q ss_pred ceEEEeccCccccccc-ceeeEEEcCHHHHHHHHH-------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 292 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
+-+++|.++ .| +++|.+++++++.+.+.. .....+++.+++...++.+.|+.- ++ ..+.+..
T Consensus 288 ----iv~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l---~~--~~l~~~~ 357 (460)
T PRK06916 288 ----IMTAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELY---EK--TNLIEQV 357 (460)
T ss_pred ----eeeeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHH
Confidence 345899998 88 599999999999887642 123346677899888888877631 11 1233344
Q ss_pred HHHHHHHHHHhccC---CCCeecCCCceEEEeeeccCccCCcccCCCCCCC-HHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012124 364 RERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN-SESLCRYLLDKAQVALVPGDAFGDDTCI 439 (470)
Q Consensus 364 ~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gI~v~pg~~f~~~~~i 439 (470)
+++-+++.+.|+++ +.+.-. ..-|+++-+.+.+..... +....... ...+.+.++++ ||.+.|.. +.+
T Consensus 358 ~~~g~~l~~~l~~l~~~~~v~~v-rG~Glm~giel~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-----~~l 429 (460)
T PRK06916 358 ARKTEYVATQLEDLFALKHVGDI-RQLGLMVGIELVKNKETK-EPFEWTERVGVQVCKRSREL-GMLTRPLG-----NTI 429 (460)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEe-ecCCceeeEEeecccccc-cCCCchhhHHHHHHHHHHHC-CeEEEecC-----CEE
Confidence 44444455555443 222111 223454555553210000 00000001 24577777665 99998731 468
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012124 440 RISYA--ASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 440 Rls~~--~~~~~i~~~l~~l~~~l~~~~ 465 (470)
|+... .+++++++++++|+++++++.
T Consensus 430 ~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 430 VFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 87744 499999999999999998764
No 321
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.73 E-value=4.3e-15 Score=148.52 Aligned_cols=337 Identities=14% Similarity=0.100 Sum_probs=206.9
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|.. .+.. ++.+.+++.+++.+....... .-..+....+++.+.+..+. .-+.++++++++++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~--~~~~v~f~~sGseA~e 119 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFG-GFTHKPAIELCQKLVKMTPN--ALDCVFLADSGSVAVE 119 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhCCC--CCCEEEEeCCcHHHHH
Confidence 5778999988752 2233 789999999988753211100 00112334455555443321 2368999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CCE-------------EEEecCcCCCCC-----ccCHHhHh
Q 012124 169 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DAT-------------PVILPTRISENF-----LLDPKVLE 221 (470)
Q Consensus 169 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~v~~~~~~~~-----~~d~~~l~ 221 (470)
.+++.... +| .+|+...-+|++....+... |.. ...++.. ...+ .-|+++++
T Consensus 120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~ 198 (427)
T TIGR00508 120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLA 198 (427)
T ss_pred HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHH
Confidence 88886431 23 67888899999875433322 211 1111111 0001 01456677
Q ss_pred hhcc---CCceEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEE
Q 012124 222 SKLT---EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLT 295 (470)
Q Consensus 222 ~~l~---~~~~~i~l~~p-~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~ 295 (470)
+.+. +++.+|++... +.-.|. ..+.+.+++|.++|++| ++++|.||++.++...+... .....+.+ + |+
T Consensus 199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~-~~llI~DEv~tG~Gr~G~~~~~~~~~v~p--D--i~ 273 (427)
T TIGR00508 199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY-DILLIADEIATGFGRTGKLFACEHAGVVP--D--IL 273 (427)
T ss_pred HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCccchhhhcCCCC--C--EE
Confidence 7764 34556666543 655565 55899999999999999 99999999997754333221 11122222 2 33
Q ss_pred EeccCcccccccc-eeeEEEcCHHHHHHHHHHh-----hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 012124 296 VNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 369 (470)
Q Consensus 296 i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~-----~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (470)
+++|.++ .|+ .++.+++++++.+.+.... ...++..+++...++.+.|+.-.. ++ ..+..+++.++
T Consensus 274 --~~gK~l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~-~~----~~~~~~~~~~~ 345 (427)
T TIGR00508 274 --CVGKALT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE-GE----WQKQVSAIENQ 345 (427)
T ss_pred --Eechhhh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-CC----HHHHHHHHHHH
Confidence 4899997 885 7899999999988876421 223455688888888888763110 22 33445555555
Q ss_pred HHHHhccC---CCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--
Q 012124 370 LVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-- 444 (470)
Q Consensus 370 l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~-- 444 (470)
+.+.|+++ +.+.-.. .-|.++-+.+.+.. ....+.++|+++ ||.+.+.. +.+|++..
T Consensus 346 l~~~L~~l~~~~~i~~vr-g~G~~~~i~~~~~~-----------~~~~~~~~l~~~-Gv~~~~~~-----~~l~~~ppl~ 407 (427)
T TIGR00508 346 LKRELSPLRKNPVVKDVR-VLGAIGVVEMYKPV-----------NVEELQKKFVEQ-GVWIRPFG-----KLIYVMPPYI 407 (427)
T ss_pred HHHHHHHhhcCCCEEeEe-ccccEEEEEECCcc-----------CHHHHHHHHHHC-CeEEEecC-----CEEEEECCCC
Confidence 66666554 1121111 12444555554321 456788888766 99987632 47899877
Q ss_pred cCHHHHHHHHHHHHHHHHh
Q 012124 445 ASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 445 ~~~~~i~~~l~~l~~~l~~ 463 (470)
.++++|++++++|++++++
T Consensus 408 ~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 408 ITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 4999999999999998864
No 322
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.73 E-value=8.8e-15 Score=140.96 Aligned_cols=212 Identities=17% Similarity=0.187 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCcC
Q 012124 134 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRI 209 (470)
Q Consensus 134 ~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~ 209 (470)
..|.+.++++- ..++.+.++++..||..++..++++||.|++.+..|.+.... ++..|.++..++.
T Consensus 66 ~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~-- 135 (396)
T COG0626 66 DALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-- 135 (396)
T ss_pred HHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC--
Confidence 45555555542 457899999999999999999999999999999999887654 4568888877763
Q ss_pred CCCCccCHHhHhhhcc-CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 210 SENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 210 ~~~~~~d~~~l~~~l~-~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.+.+.+++++. +++++|++.+|.|||-.+.+ +.+|+++|+++ |+++|+|++|..-.+.. + ++
T Consensus 136 -----~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~-g~~vvVDNTfatP~~q~----P---L~- 198 (396)
T COG0626 136 -----GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAY-GALVVVDNTFATPVLQR----P---LE- 198 (396)
T ss_pred -----CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhc-CCEEEEECCcccccccC----h---hh-
Confidence 25566666666 59999999999999999888 99999999999 89999999997532221 1 21
Q ss_pred CCCceEEEeccCccccc-ccceeeEEEcCHH-HHHHHHHHhh-hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAM-TGWRLGYIAGPKH-FVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 365 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~-~G~r~G~~~~~~~-~~~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 365 (470)
.+-.|++.|.+|-++- ..+=.|.++++.+ +.+.+..... ......+++....+..-++ -+.-+.++..+
T Consensus 199 -~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-------TL~~Rm~~~~~ 270 (396)
T COG0626 199 -LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR-------TLALRMERHNE 270 (396)
T ss_pred -cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc-------hHHHHHHHHHH
Confidence 3566999999999951 2233576776654 4444433333 3566677776544443333 23344455566
Q ss_pred HHHHHHHHhccCCCC
Q 012124 366 RRDFLVKSFGELEGV 380 (470)
Q Consensus 366 ~~~~l~~~L~~~~g~ 380 (470)
+...+.+.|++.|.+
T Consensus 271 nA~~IA~~L~~~p~V 285 (396)
T COG0626 271 NALKIAEFLADHPKV 285 (396)
T ss_pred HHHHHHHHHhcCCCe
Confidence 677777888776655
No 323
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=5.3e-15 Score=144.83 Aligned_cols=210 Identities=11% Similarity=0.137 Sum_probs=142.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~ 208 (470)
..+|.+.++++. | .+..+++++++.|+.+++.+++++||+|+++.+.|.+.. ..+...|++++.++++
T Consensus 66 ~~~lE~~la~le----g----~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~ 137 (384)
T PRK06434 66 VQAFEEKYAVLE----N----AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTD 137 (384)
T ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCC
Confidence 345555555553 3 356788888889999999999999999999988777665 4566789999999986
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
+.+.+.++ .+++++|++.+|.|||+.+.+ +++|+++|+++ + +++|.++..- +.. .++.
T Consensus 138 ~~~~~~l~--------~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~-~--lvVD~t~~s~-~~~---~pl~---- 195 (384)
T PRK06434 138 RLNSLDFD--------PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEN-D--VIVDATFASP-YNQ---NPLD---- 195 (384)
T ss_pred Chhheeec--------CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHc-C--eEEECCCCCc-ccC---Cchh----
Confidence 43332221 136899999999999999887 88999999999 8 3559997431 111 1221
Q ss_pred CCCceEEEeccCccccccc-ceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G-~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
.+-.+++.|.+|.++-+| .=.|.++. ++++.+.+...........+++....+..-| +.+..+.++.+++
T Consensus 196 -~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-------~tL~~R~~r~~~~ 267 (384)
T PRK06434 196 -LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGL-------KTLGLRMEKHNKN 267 (384)
T ss_pred -cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCC-------CcHHHHHHHHHHH
Confidence 245588999999996333 33577766 5566677665554455555655433322222 2344555555667
Q ss_pred HHHHHHHhccCCCC
Q 012124 367 RDFLVKSFGELEGV 380 (470)
Q Consensus 367 ~~~l~~~L~~~~g~ 380 (470)
...+.+.|+..|.+
T Consensus 268 a~~~a~~L~~~p~v 281 (384)
T PRK06434 268 GMELARFLRDSKKI 281 (384)
T ss_pred HHHHHHHHHcCCCc
Confidence 77777778776655
No 324
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=7.5e-15 Score=147.81 Aligned_cols=355 Identities=13% Similarity=0.048 Sum_probs=212.1
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCC---CCCCcEEEecChHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS---YTPDQILVSNGAKQ 165 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~---~~~~~i~it~g~~~ 165 (470)
+|+.+||+..|.. .+.. ++.+.+++.+++.+-.... ...-..+.+..+++.+....... ...+.+++++++++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSE 140 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSA 140 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchH
Confidence 6778999988853 2333 7889999999886421111 11111345667777776543211 12358999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCcCCC--CCcc-------
Q 012124 166 SILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE--NFLL------- 215 (470)
Q Consensus 166 al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~~------- 215 (470)
|.+.+++.... +| .+|+...-+|++....+... |. .+..+|..... .++.
T Consensus 141 AvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~ 220 (472)
T PRK08742 141 GVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYAL 220 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHH
Confidence 99999887521 33 67888899999876443322 11 11222221100 0011
Q ss_pred -CHHhHhhhcc---CCceEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-cccccCC
Q 012124 216 -DPKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPG 288 (470)
Q Consensus 216 -d~~~l~~~l~---~~~~~i~l~~-p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~-~~~~~~~ 288 (470)
+++.+++.+. +++.+|++.. .+.-.|. ..+++.++++.++|++| |+++|.||++..|...+.... ....+.+
T Consensus 221 ~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~-gillI~DEV~TGfGRtG~~~a~e~~gv~P 299 (472)
T PRK08742 221 QAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH-GAFLIADEIATGFGRTGTLFACEQAGVMP 299 (472)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccchHHHhcCCCC
Confidence 2466666663 3566676654 3666676 66899999999999999 999999999998744332111 1112222
Q ss_pred CCCceEEEeccCcccccccc-eeeEEEcCHHHHHHHHHH------hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 361 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~-r~G~~~~~~~~~~~l~~~------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 361 (470)
+ +-+++|.++ .|+ ++|.+++++++.+.+... ....+++.+++...++.+.|+.-.. ++.+++.++
T Consensus 300 D------iv~~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~-~~l~~~~~~ 371 (472)
T PRK08742 300 D------LLCLSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD-DDVIARNQP 371 (472)
T ss_pred C------EEEEccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH-CCHHHHHHH
Confidence 2 445789998 884 999999999998876421 2335677899998888887763110 122222222
Q ss_pred HHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCC-CHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012124 362 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVALVPGDAFGDDTCIR 440 (470)
Q Consensus 362 ~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gI~v~pg~~f~~~~~iR 440 (470)
. -++...+.+.+.+.+.+.-. ..-|+++-+.+....... ..+.... -...+.+.++++ ||.+.+. .+.||
T Consensus 372 ~-g~~l~~~~~~~~~~~~i~dv-RG~Gl~~giel~~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----g~vi~ 442 (472)
T PRK08742 372 T-AARMTQLAAQIGEHPHVADV-RQAGMVVAFELTRGGNKR-TPFPPAARVGLHAYRAALAR-GVVLRPL-----GDVLY 442 (472)
T ss_pred H-HHHHHHHHHHHhcCCCeeeE-eccceEEEEEeccCcccc-ccCCchhHHHHHHHHHHHHC-CeEEEec-----CCEEE
Confidence 2 11112233334444322212 234666666664210000 0000000 024566666665 9998763 25799
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 441 ISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 441 ls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
|.... +++++++++++|+++++++.
T Consensus 443 ~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 443 WMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 98765 99999999999999998754
No 325
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=9.2e-15 Score=147.11 Aligned_cols=358 Identities=15% Similarity=0.094 Sum_probs=205.9
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-CcEEEecChHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~i~it~g~~~al 167 (470)
+|+.+||+..|... +.. +|.+.+++.+++.+....+. ..-..+.+..+++.+....+..... ..+++++++++|.
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAv 134 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAV 134 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHH
Confidence 67889999988633 333 78899999998875322111 1112466677777776544311011 1345668999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-C------------CEEEEecCcCCC--CCc----cCHHhH----hh
Q 012124 168 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISE--NFL----LDPKVL----ES 222 (470)
Q Consensus 168 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~--~~~----~d~~~l----~~ 222 (470)
+.+++... ...++|+...-+|++....+... | ..+..+|..... .++ -+.+.+ ++
T Consensus 135 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 135 EAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 99888642 23467888899999887554422 1 112223321100 000 012222 23
Q ss_pred hcc------CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc--cccCCCCCce
Q 012124 223 KLT------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF--ASLPGMWERT 293 (470)
Q Consensus 223 ~l~------~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~--~~~~~~~~~~ 293 (470)
.+. +++.+|++...+.-.|. ..+++.++++.++|++| |+++|.||+...|...+. .... ..+.++
T Consensus 215 ~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~LlI~DEV~tGfGRtG~-~~a~~~~gv~PD---- 288 (459)
T PRK06931 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH-GILLIVDEVQAGFARTGK-MFAFEHAGIEPD---- 288 (459)
T ss_pred HHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhcCCcCch-HHHhhhcCCCCC----
Confidence 322 24666766444544565 56899999999999999 999999999998733332 1111 122222
Q ss_pred EEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHH
Q 012124 294 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 373 (470)
Q Consensus 294 i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 373 (470)
+-+++|.++ .|+++|.+++.+++ +.+.......+++.++++..++.+.|+.-.. ++.+++..+.=...++.|.+.
T Consensus 289 --ivt~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~-~~l~~~~~~~G~~l~~~L~~l 363 (459)
T PRK06931 289 --IIVMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKE-ENLAQNAAERGEWLKAQLAEL 363 (459)
T ss_pred --EEEeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 455799998 89999998887653 5543333445778899998888888763110 122233222222223333332
Q ss_pred hccCCCCeecCCCceEEEeeeccCccCCc-ccCCCC--CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHH
Q 012124 374 FGELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLT 448 (470)
Q Consensus 374 L~~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~ 448 (470)
.++.|-+ .....-|+++.+++.+..... ...... ..-...+...++++ ||.+.+...+ .+.+|+.... +++
T Consensus 364 ~~~~~~i-~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~--~~~l~~~Ppl~it~~ 439 (459)
T PRK06931 364 QKRYPCI-GNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN-GLLLERGGRN--GNVVRLLPPLLITQA 439 (459)
T ss_pred HHhCCCe-EeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC-CcEEeecCCC--CCEEEEECCCCcCHH
Confidence 2334322 112234666666763210000 000000 00124566666655 9998774322 4678877664 999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 012124 449 TLQAAVERIKKGLLTLR 465 (470)
Q Consensus 449 ~i~~~l~~l~~~l~~~~ 465 (470)
++++++++|.++++++.
T Consensus 440 eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 440 ECEEFIDRFEQALLAAV 456 (459)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987653
No 326
>PRK06148 hypothetical protein; Provisional
Probab=99.72 E-value=1.2e-14 Score=159.00 Aligned_cols=348 Identities=11% Similarity=0.075 Sum_probs=210.7
Q ss_pred cCCCeEEccCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
+|+.++|+..|...+.. ++.+.+++.+++.+..... .-..+....+++.+....+ ..-+.+++++++++|.+.+
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA~e~A 696 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT---RYLHDAIVAYAERLTATLP--DGLTVAFFVNSGSEANSLA 696 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC---CcCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHH
Confidence 47789999888655554 7899999999987531111 1123455666666665432 1236899999999999999
Q ss_pred HHHhc--CCCCeEEEcCCCCCChHHHHHH-cC------------CEEEEecCc--CCCCCcc-C-------HHhHhhhcc
Q 012124 171 VLAVC--SPGDEVIIPAPFWVSYPEMARI-AD------------ATPVILPTR--ISENFLL-D-------PKVLESKLT 225 (470)
Q Consensus 171 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~g------------~~~~~v~~~--~~~~~~~-d-------~~~l~~~l~ 225 (470)
++... ....+|+..+-+|++....... .+ -.+..++.. ....+.. + .+.+++.+.
T Consensus 697 lklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 697 LRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred HHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 88753 1236788888899887643222 11 011111110 0001110 1 133444442
Q ss_pred ------CCceEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccc--ccCCCCCceEEE
Q 012124 226 ------EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA--SLPGMWERTLTV 296 (470)
Q Consensus 226 ------~~~~~i~l~~p~nPtG-~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~--~~~~~~~~~i~i 296 (470)
+++.+|++...+.-.| ...+++.++++.++|++| |+++|.||++..|...|....... .+.++ |
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~-g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD------i 849 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA-GGVCIADEVQVGFGRVGSHWWAFETQGVVPD------I 849 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEecccCCCCCCCcchhhhhcCCCcc------e
Confidence 3466666644444344 567899999999999999 999999999988633332111111 22222 5
Q ss_pred eccCcccccccceeeEEEcCHHHHHHHHHH-hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012124 297 NGFSKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 375 (470)
Q Consensus 297 ~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 375 (470)
-+++|.+| .|+++|.+++.+++.+.+..- ....+++.++++..++.+.|+.-.. ++ +.+..++.-+++.+.|+
T Consensus 850 vt~gK~lg-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~-e~----l~~~~~~~G~~l~~~L~ 923 (1013)
T PRK06148 850 VTMGKPIG-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED-ED----LQRNALEIGNYLLAGLR 923 (1013)
T ss_pred eeeccccc-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh-cc----HHHHHHHHHHHHHHHHH
Confidence 66899998 899999999999998877532 1346777899998888888764111 22 22333333344444443
Q ss_pred c----CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHH
Q 012124 376 E----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTT 449 (470)
Q Consensus 376 ~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~ 449 (470)
+ .+-+. ....-|+++-+++......... .......+++.++++ ||.+.+...+ .+.+|+.... ++++
T Consensus 924 ~l~~~~~~i~-~VrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~~~~~-Gvl~~~~g~~--~~vlr~~Ppl~it~~~ 996 (1013)
T PRK06148 924 ELQDRFDIIG-DVRGMGLFLGIELVTDRKTKAP---ATAIARYVKNGARER-GILIGTEGPH--DNVLKIRPPLIFSRAD 996 (1013)
T ss_pred HHHHhCCCce-EEeeeceEEEEEecCCccccCc---cHHHHHHHHHHHHhC-CeEEeccCCC--CCEEEEeCCccCCHHH
Confidence 3 32121 1123466677776421000000 000134567777765 9999774322 4678887664 9999
Q ss_pred HHHHHHHHHHHHHhh
Q 012124 450 LQAAVERIKKGLLTL 464 (470)
Q Consensus 450 i~~~l~~l~~~l~~~ 464 (470)
+++++++|+++++++
T Consensus 997 id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 997 ADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999765
No 327
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.71 E-value=9.1e-15 Score=138.97 Aligned_cols=183 Identities=16% Similarity=0.186 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCcCC
Q 012124 135 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRIS 210 (470)
Q Consensus 135 ~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~ 210 (470)
+-+..+...+....| ..+.++.+++..|+..++..|+.+|+.|+..+..|.+...+++ .+|.+...+.++
T Consensus 77 Pt~~~le~~iaal~g----a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-- 150 (409)
T KOG0053|consen 77 PTRDVLESGIAALEG----AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-- 150 (409)
T ss_pred CchHHHHHHHHHHhC----CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh--
Confidence 344444444444333 3568999999999999999999999999999999999876654 578887777653
Q ss_pred CCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCC
Q 012124 211 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 290 (470)
Q Consensus 211 ~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~ 290 (470)
|++.+++++++++++|++.+|.||+..+.+ +++|.++|+++ |++||+|+.+....+. .... .
T Consensus 151 -----~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~-g~~vvVDnTf~~p~~~-----~pL~----l 212 (409)
T KOG0053|consen 151 -----DLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKY-GFLVVVDNTFGSPYNQ-----DPLP----L 212 (409)
T ss_pred -----hHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhC-CCEEEEeCCcCccccc-----Chhh----c
Confidence 788899999999999999999999999999 88889999999 9999999999763221 1111 2
Q ss_pred CceEEEeccCcccc-cccceeeEEEcC-HHHHHHHHHHhhhccCCCChHHHHH
Q 012124 291 ERTLTVNGFSKAFA-MTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKA 341 (470)
Q Consensus 291 ~~~i~i~S~sK~~~-~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~a 341 (470)
+-.|++.|.+|.++ -..+=.|.++.. .++.+++...+....++.+++....
T Consensus 213 GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~l 265 (409)
T KOG0053|consen 213 GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFL 265 (409)
T ss_pred CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 45599999999995 223445778875 8899999998888888888876443
No 328
>PLN02880 tyrosine decarboxylase
Probab=99.70 E-value=1e-14 Score=147.49 Aligned_cols=341 Identities=13% Similarity=0.089 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCC-----CcEEEecChHHHHHHHHHHhcC--------
Q 012124 110 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-----DQILVSNGAKQSILQAVLAVCS-------- 176 (470)
Q Consensus 110 ~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~i~it~g~~~al~~~~~~l~~-------- 176 (470)
..+-+.+...+......|...+...++.+.+.+|+.+.+|.+-.. ..-++|+|++++...++.+..+
T Consensus 97 ~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~ 176 (490)
T PLN02880 97 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGK 176 (490)
T ss_pred HHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcc
Confidence 334455555555445556566778899999999999999975321 2367789988887666654321
Q ss_pred ---CCCeEEEcCCCCCChHHHHHHcCCE---EEEecCcCCCCCccCHHhHhhhccCC------ceEEEEcCCCCCcccCC
Q 012124 177 ---PGDEVIIPAPFWVSYPEMARIADAT---PVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVY 244 (470)
Q Consensus 177 ---~gd~Vlv~~p~y~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~i~l~~p~nPtG~~~ 244 (470)
+.-.|++.+-+|.+....+..+|+. ++.||++.++++.+|++.|++++.+. +-+|+-+....+||.+.
T Consensus 177 ~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD 256 (490)
T PLN02880 177 NALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD 256 (490)
T ss_pred cccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC
Confidence 1124567888899999999999984 78899876566789999999999532 33444466688999999
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc-cCCCCCceEEEeccCcccccccceeeEEEcCH--HHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVA 321 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~--~~~~ 321 (470)
| +++|+++|++| |+|+++|.+|+.+.... +.+.. +.+...-.-+..+++|.+. ....+|+++.+. .+.+
T Consensus 257 p---l~eI~~i~~~~-~iwlHVDaA~gg~~~~~---~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~ 328 (490)
T PLN02880 257 P---LLELGKIAKSN-GMWFHVDAAYAGSACIC---PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQ 328 (490)
T ss_pred c---HHHHHHHHHHc-CCEEEEehhhHHHHHhC---HHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHH
Confidence 9 88999999999 99999999999754321 11111 1211123467788999995 778899988763 2222
Q ss_pred HHHHHhhhcc--------------C---CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC
Q 012124 322 ACNKIQSQFT--------------S---GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 384 (470)
Q Consensus 322 ~l~~~~~~~~--------------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 384 (470)
.+..-..+.. + +...+....+-..|+. ++.+.++++.+...+..+++.+.+++.+++++..
T Consensus 329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~--~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRL--YGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 2211110000 0 1111111111112322 1355566666666688888999998888888765
Q ss_pred C-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHH
Q 012124 385 P-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKG 460 (470)
Q Consensus 385 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~ 460 (470)
| ..++ +.++++..... .+.. ..-..++.++|.+++.+.+.+ ..+....++|+++.. ++++++.+++.|.++
T Consensus 407 ~~~~~i-v~Fr~~~~~~~-~~~~--~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~ 481 (490)
T PLN02880 407 PRIFSL-VCFRLVPPKNN-EDNG--NKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDE 481 (490)
T ss_pred CCceEE-EEEEEeCCCCC-hhhH--HHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 5 4455 55676532000 0000 001135666676666666654 334445689999876 679999999999888
Q ss_pred HHhhC
Q 012124 461 LLTLR 465 (470)
Q Consensus 461 l~~~~ 465 (470)
.+++.
T Consensus 482 ~~~~~ 486 (490)
T PLN02880 482 ASKLL 486 (490)
T ss_pred HHHHH
Confidence 77654
No 329
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.70 E-value=4.9e-14 Score=124.37 Aligned_cols=299 Identities=16% Similarity=0.198 Sum_probs=202.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCC
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 212 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 212 (470)
+..+.+.+++|+ | -|.+-+|+|+.++=+.++.+++++||.|+++.-++....-+++.+|+++..||-.....
T Consensus 63 I~~F~~dlaeFl----g----~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 63 IKDFLEDLAEFL----G----MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred HHHHHHHHHHHh----C----CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCc
Confidence 456667788876 3 36789999999999999999999999999999998888888999999999999766667
Q ss_pred CccCHHhHhhhccC-------CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc
Q 012124 213 FLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 285 (470)
Q Consensus 213 ~~~d~~~l~~~l~~-------~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~ 285 (470)
+.+++|...+.+.+ .+.+.+++.+..--|...+ .++++++|+++ +++++...+|.- +..+.+...
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~-gvPlllN~AYt~----Grmpvs~ke 206 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREY-GVPLLLNCAYTV----GRMPVSGKE 206 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHc-CCceEeecceee----ccccccccc
Confidence 88999887776632 3667778888766777666 88999999999 999999999986 444455554
Q ss_pred cCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhh-c------cCCCChHHHHHHHHHHhcCCCChHHHHH
Q 012124 286 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ-F------TSGASSISQKAGVAALGLGYAGGEVVSK 358 (470)
Q Consensus 286 ~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~-~------~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 358 (470)
+ +..++++|-+|+++ +.-++|.+....++.+.+.+.... + -.++..-+. -...++.+ -.++.+
T Consensus 207 ~----g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGa-pivTlmAS----fP~V~e 276 (382)
T COG1103 207 I----GADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGA-PIVTLMAS----FPHVVE 276 (382)
T ss_pred c----CCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCc-hHHHHHhc----CHHHHH
Confidence 4 34489999999997 666899999999998877554311 1 011111111 11122222 122222
Q ss_pred HHHH---HHHHHHHHHHHhccCCCCeec--CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012124 359 MVKA---FRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433 (470)
Q Consensus 359 ~~~~---~~~~~~~l~~~L~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f 433 (470)
..++ --++.+++.+.|+++.|+.-. .|..--.+.+..|......... ....-.+.+.|.++.-+-+.||
T Consensus 277 RVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~---~r~gyFlY~ELK~RgI~GI~~G--- 350 (382)
T COG1103 277 RVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKH---KRKGYFLYEELKKRGIHGIQPG--- 350 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhC---cCCceeeHHHHHhcCccccccC---
Confidence 2222 223556778888887555432 2322222444544321000000 0022345667776633345554
Q ss_pred CCCCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012124 434 GDDTCIRISYAA-SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 434 ~~~~~iRls~~~-~~~~i~~~l~~l~~~l~~~ 464 (470)
...+|.+|+-. +.|+++..++.++++++++
T Consensus 351 -~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 351 -QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred -ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 35789999877 9999999999999999875
No 330
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.70 E-value=2e-14 Score=144.17 Aligned_cols=342 Identities=10% Similarity=0.082 Sum_probs=196.5
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHH--HHHHHHHcCCCCC-CCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAE--AGINAIREGFTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~--a~~~~~~~~~~~y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+|+.++|+..|.. .+.. +|.+.+ ++.+++.+-.... ....-..+....+++.+.+..+ +-..+.+++++++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGsE 121 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGAL 121 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchHH
Confidence 4677899988753 3333 678888 8888876421100 0001112344445555544321 113469999999999
Q ss_pred HHHHHHHHhc--------CC------CCeEEEcCCCCCChHHHHHHc-CCEEE-----------EecCcCC----CCCc-
Q 012124 166 SILQAVLAVC--------SP------GDEVIIPAPFWVSYPEMARIA-DATPV-----------ILPTRIS----ENFL- 214 (470)
Q Consensus 166 al~~~~~~l~--------~~------gd~Vlv~~p~y~~~~~~~~~~-g~~~~-----------~v~~~~~----~~~~- 214 (470)
|++.+++... .. ..+|+...-+|++....+... |.... .++.... .+..
T Consensus 122 Ave~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK08297 122 AVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL 201 (443)
T ss_pred HHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence 9999998752 11 257998999999876544332 21100 0110000 0000
Q ss_pred --------cCHHhHhhhcc---CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-
Q 012124 215 --------LDPKVLESKLT---EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT- 281 (470)
Q Consensus 215 --------~d~~~l~~~l~---~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~- 281 (470)
-+++.+++.+. +++.+|++...+...|. ..|++.+++|.++|++| |+++|.||++..|...+....
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~a~ 280 (443)
T PRK08297 202 EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH-DALLIFDEVQTGVGLTGTAWAY 280 (443)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCccchHHHH
Confidence 02345556663 46677777544544564 57899999999999999 999999999988643332100
Q ss_pred cccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHH-----HhhhccCCCChHHHHHHHHHHhcCCCChHHH
Q 012124 282 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVV 356 (470)
Q Consensus 282 ~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~ 356 (470)
....+.+ | +-+|+|.++ +|.+++..++.+.... .....+++.++++..++.+.|+.-.. ++.+
T Consensus 281 ~~~gv~P--D----iv~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~ 348 (443)
T PRK08297 281 QQLGVRP--D----IVAFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE-DGLV 348 (443)
T ss_pred HhcCCCC--C----EEEeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh-cCHH
Confidence 0112222 1 335899974 2333344443222111 12345677889998888888763111 2223
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012124 357 SKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 435 (470)
Q Consensus 357 ~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~ 435 (470)
++..+.-+..++.+.+...+.+.+. .... .|+++.+.+++.. ....+++.|+++ ||.+.|+.
T Consensus 349 ~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-~G~~~~i~~~~~~-----------~~~~~~~~l~~~-Gvl~~~~~---- 411 (443)
T PRK08297 349 ENAARQGEYLLARLEELAAEFPAVVSNVRG-RGLMCAFDLPTTA-----------DRDEVIRRLWEE-GVLVLPCG---- 411 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcceeeec-cceEEEEEecCHH-----------HHHHHHHHHHHC-CEEEecCC----
Confidence 3333333333333333333344332 2223 3666777875421 345778887755 99998753
Q ss_pred CCcEEEEe--ecCHHHHHHHHHHHHHHHHhh
Q 012124 436 DTCIRISY--AASLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 436 ~~~iRls~--~~~~~~i~~~l~~l~~~l~~~ 464 (470)
.+.+|++. ..+++++++++++|.++++++
T Consensus 412 ~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 24688854 459999999999999998765
No 331
>PRK06149 hypothetical protein; Provisional
Probab=99.69 E-value=4.4e-14 Score=154.56 Aligned_cols=349 Identities=14% Similarity=0.103 Sum_probs=207.1
Q ss_pred cCCCeEEccCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 92 AGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
+|+.++|+..|...+.. ++.+.+++.+++....... ....+....+++.+.+... -..+.+++++++++|.+.+
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~elae~L~~~~p--~~~~~v~f~~SGsEA~e~A 657 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS---RFHYAAVAEFSERLAALAP--DGLDTVFLVNSGSEANDLA 657 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc---cccCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHH
Confidence 57789999988755553 7899999999887532211 1122455666666665432 1236899999999999999
Q ss_pred HHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCcC--CCCCc-cC-----HHhHhhhcc-
Q 012124 171 VLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRI--SENFL-LD-----PKVLESKLT- 225 (470)
Q Consensus 171 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~--~~~~~-~d-----~~~l~~~l~- 225 (470)
++... .....|+..+-+|++........ +. .+..++... ...|. .+ .+.+++.++
T Consensus 658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 737 (972)
T PRK06149 658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE 737 (972)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH
Confidence 98431 22356788888888755332111 10 112222211 00111 11 233333331
Q ss_pred -----CCceEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEecc
Q 012124 226 -----EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 299 (470)
Q Consensus 226 -----~~~~~i~l~~p-~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~ 299 (470)
+++.+|++... ++-.....+++.+++|.++|++| |+++|.||++..|...|.....+..+.- ... |-+|
T Consensus 738 ~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~-g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PD---ivt~ 812 (972)
T PRK06149 738 LDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR-GGVCIADEVQVGYGRLGHYFWGFEQQGV-VPD---IITM 812 (972)
T ss_pred HhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEEeehhcCCccCccchhhhhcCC-CCC---EEEe
Confidence 24556666444 44444677899999999999999 9999999999775333321111111111 111 3378
Q ss_pred CcccccccceeeEEEcCHHHHHHHHHH-hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc--
Q 012124 300 SKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-- 376 (470)
Q Consensus 300 sK~~~~~G~r~G~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-- 376 (470)
+|.+| .|+.+|++++.+++.+.+... ....+++.++++..++.+.|+.-.. + ++.+..++.-+++.+.|++
T Consensus 813 gK~lg-~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~-e----~l~~~~~~~G~~l~~~L~~l~ 886 (972)
T PRK06149 813 AKGMG-NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE-E----KLQENARRVGDHLKARLEALA 886 (972)
T ss_pred ccccc-CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh-c----CHHHHHHHHHHHHHHHHHHHH
Confidence 99998 899999999999998877631 1123467889998888888864111 1 2333333333444444433
Q ss_pred --CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHH
Q 012124 377 --LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQA 452 (470)
Q Consensus 377 --~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~ 452 (470)
.+-+... ..-|+++-+++......... .......+++.|+++ ||.+.+.... .+.+|+... .+++++++
T Consensus 887 ~~~~~i~~v-rG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~l~~~-Gvl~~~~g~~--~~vl~~~Ppl~it~~~id~ 959 (972)
T PRK06149 887 DRHPLIGAV-HGMGLYLGVELVRDRQTLEP---ATEETAAICDRLLEL-GVIMQPTGDH--LNILKIKPPLCLDRESADF 959 (972)
T ss_pred HhCCCeEEE-eecceEEEEEEecCcccCCC---ChHHHHHHHHHHHhC-CeEEeecCCC--CCEEEEECCCcCCHHHHHH
Confidence 3222222 23466677776321000000 000235677777765 9999874221 367888766 49999999
Q ss_pred HHHHHHHHHHh
Q 012124 453 AVERIKKGLLT 463 (470)
Q Consensus 453 ~l~~l~~~l~~ 463 (470)
++++|.+++++
T Consensus 960 ~~~~l~~~l~~ 970 (972)
T PRK06149 960 FVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 332
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.69 E-value=1.3e-14 Score=142.03 Aligned_cols=314 Identities=13% Similarity=0.062 Sum_probs=189.6
Q ss_pred ChHHHHHHHHHHHHc--CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEe-cChHHHHHHHHHHhcCCCCeEEEc
Q 012124 108 TPVLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS-NGAKQSILQAVLAVCSPGDEVIIP 184 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~--~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it-~g~~~al~~~~~~l~~~gd~Vlv~ 184 (470)
.|+.+.+++...-.. ...++.+ -..++-+.+.+.+.+.++.+ +..+|+++ ++++.+++.++..++.+ +.+++.
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~--~f~~~~~~~r~~l~~l~~~~-~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~ 89 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQA--PVKNLVGRVREGLAELFSLP-DGYEVILGNGGATAFWDAATFGLIEK-KSLHLS 89 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCCh--HHHHHHHHHHHHHHHHhCCC-CCceEEEECCchhHHHHHHHHhcccc-cccEEe
Confidence 367777776532100 0112211 22344344444444445532 33478876 55999999999998743 333333
Q ss_pred CCCCCC-hHHHHHH--cCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012124 185 APFWVS-YPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 261 (470)
Q Consensus 185 ~p~y~~-~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~ 261 (470)
.-.|.. +.+.+.. ++.++..++.+. +. .++..+++++++|.+++..|.||...| +++| ++++ |
T Consensus 90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~~~-g 155 (361)
T TIGR01366 90 FGEFSSKFAKAVKLAPWLGEPIIVTADP--GS-----APEPQADPGVDVIAWAHNETSTGVAVP---VRRP---EGSD-D 155 (361)
T ss_pred cCHHHHHHHHHHHhhhccCCceEEecCC--CC-----CCCCccCCCCCEEEEcccCCccceecc---cccc---cccC-C
Confidence 333332 2334443 223566666532 21 222345678999999999999999999 4444 4788 9
Q ss_pred EEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh-------------
Q 012124 262 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------------- 328 (470)
Q Consensus 262 ~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~------------- 328 (470)
+++|+|.+.+. +.....+.. -.+++.|-.|.+|.+| .++++++++++++++.....
T Consensus 156 ~~~iVDavqs~----g~~~idv~~------~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~ 224 (361)
T TIGR01366 156 ALVVIDATSGA----GGLPVDIAE------TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLPT 224 (361)
T ss_pred CeEEEEcCccc----cCCCCCHHH------CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHHH
Confidence 99999999875 222233332 2478899999998664 26666778877766542110
Q ss_pred -------hccCCCChHH-HHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCCeecCC-C---ceEEEeeec
Q 012124 329 -------QFTSGASSIS-QKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP-Q---GAFYLFIDF 395 (470)
Q Consensus 329 -------~~~~~~~~~~-q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~---~g~~~~~~~ 395 (470)
..+.+++.+. ..++..+++.-. +. .++.+.+++++..+++.+.|.++++++.... . +.....+.+
T Consensus 225 ~~~~~~~~~t~~tp~i~~i~~l~~al~~l~--~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~ 302 (361)
T TIGR01366 225 AVDNSLKNQTYNTPAIATLALLAEQIDWMN--GNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF 302 (361)
T ss_pred HHhccccCCCCCCchHHHHHHHHHHHHHHH--HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC
Confidence 0112233333 224444444310 12 2567778888999999999998855544321 1 112122344
Q ss_pred cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 396 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
++.+ +..++.+.|.++ ||.+.+|...-..+.+|+|+.. +.++++.+++.|+++++++
T Consensus 303 ~~g~-----------~~~~v~~~L~~~-gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 303 VDDI-----------DAATVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred CCcc-----------CHHHHHHHHHHC-CCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 4433 778888888655 9999876422235689999987 8999999999999988753
No 333
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.69 E-value=6e-15 Score=147.76 Aligned_cols=331 Identities=15% Similarity=0.168 Sum_probs=187.6
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.+||+..|... +.. ++.+.+++.+++.+... +.. ..+.+-.+++.+.+..+ ..+.+++++++++|.+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~---~~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e 118 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-FTR---PSAIELDAAESFLELID---GADMVKFCKNGSDATS 118 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-CCC---CCHHHHHHHHHHHHhCC---ccceEEEecCHHHHHH
Confidence 67789999988633 333 78999999999886432 321 12333345555544332 2368999999999999
Q ss_pred HHHHHhc-CCC-CeEEEc-CCCCCChHHHHH-----HcCC------EEEEecCcCCCCCccCHHhHhhhccC---CceEE
Q 012124 169 QAVLAVC-SPG-DEVIIP-APFWVSYPEMAR-----IADA------TPVILPTRISENFLLDPKVLESKLTE---KSRLL 231 (470)
Q Consensus 169 ~~~~~l~-~~g-d~Vlv~-~p~y~~~~~~~~-----~~g~------~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~i 231 (470)
.+++... -.| ..|+.. .-+|++...... ..|. .+..++ . -|++.+++.++. ++.+|
T Consensus 119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~---~d~~~l~~~l~~~~~~~aav 191 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----Y---NDIASLEALFEDHPGRIACV 191 (431)
T ss_pred HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----C---CCHHHHHHHHHhCCCCEEEE
Confidence 9988642 123 345443 334433111100 0111 011111 1 278889888842 45555
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceee
Q 012124 232 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 311 (470)
Q Consensus 232 ~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G 311 (470)
++... .|...+.+.+++|.++|++| |+++|.||++..+...+........+.++ +.+|+|.+| .|+.+|
T Consensus 192 i~Epv---~g~~~~~~~l~~l~~lc~~~-g~lLI~DEv~tG~~~~~~g~~~~~gv~PD------i~t~gK~lg-gG~p~~ 260 (431)
T PRK06209 192 ILEPA---TADEPQDGFLHEVRRLCHEN-GALFILDEMITGFRWHMRGAQKLYGIVPD------LSCFGKALG-NGFAVS 260 (431)
T ss_pred EEccc---cCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccCCcCcchhhHHhCCCcc------eeeehhhhc-CCcccE
Confidence 55332 23477899999999999999 99999999987764321111111122221 577899998 889999
Q ss_pred EEEcCHHHHHH--HHHH---h---hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-
Q 012124 312 YIAGPKHFVAA--CNKI---Q---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM- 382 (470)
Q Consensus 312 ~~~~~~~~~~~--l~~~---~---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~- 382 (470)
++++++++++. +... . ...+++++++...++.+.|+.-.. +..++++++.-+..++.+.+...++ ++..
T Consensus 261 av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~~~~~~-~~~~~ 338 (431)
T PRK06209 261 ALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD-EDVIERLHEQGAKLAAGVNEAAAEH-GLQDH 338 (431)
T ss_pred EEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHHhC-CCCeE
Confidence 99999988876 3111 1 233555677777777776653211 2233333333333333333333334 3321
Q ss_pred cCCCceEEEeeecc-CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012124 383 SEPQGAFYLFIDFS-TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 461 (470)
Q Consensus 383 ~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~~l~~~l 461 (470)
....+.+....-+. ...+. .. ..-...+.++++++ ||.+.| ++++..+++++|++++++|.+++
T Consensus 339 vr~~G~~~~~~~~~~~~~~~-~~----~~~~~~~~~~l~~~-Gi~~p~---------l~is~~ht~~dId~~l~~l~~~l 403 (431)
T PRK06209 339 VRVSGRPCCLTYSTLDGNGQ-PS----QAFRTLFLQETIRR-GVLMPS---------LVVSYAHGDADIERTIDAVHGAL 403 (431)
T ss_pred EEeecceEEEEEecCCcccC-Cc----HHHHHHHHHHHHHC-Cccccc---------ccccccCCHHHHHHHHHHHHHHH
Confidence 11112221111111 10000 00 00122566777665 887632 57776679999999999999998
Q ss_pred Hhh
Q 012124 462 LTL 464 (470)
Q Consensus 462 ~~~ 464 (470)
+++
T Consensus 404 ~~~ 406 (431)
T PRK06209 404 GVY 406 (431)
T ss_pred HHH
Confidence 775
No 334
>PLN02590 probable tyrosine decarboxylase
Probab=99.69 E-value=4.5e-14 Score=142.94 Aligned_cols=343 Identities=13% Similarity=0.079 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------
Q 012124 110 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-------- 176 (470)
Q Consensus 110 ~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~i~it~g~~~al~~~~~~l~~-------- 176 (470)
..+-+.+...+......|...++..++.+.+.+|+.+.+|.+-. ...=++|+|++++...++.+...
T Consensus 145 ~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~ 224 (539)
T PLN02590 145 GFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGK 224 (539)
T ss_pred HHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcc
Confidence 34455556666555667777888899999999999999997632 12356788888887666554311
Q ss_pred ---CCCeEEEcCCCCCChHHHHHHcCC---EEEEecCcCCCCCccCHHhHhhhccCC------ceEEEEcCCCCCcccCC
Q 012124 177 ---PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVY 244 (470)
Q Consensus 177 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~i~l~~p~nPtG~~~ 244 (470)
|.-.|++.+.+|.+....++.+|+ +++.||++.++++.+|++.|+++|.+. +-+|+-+...-.||.+=
T Consensus 225 ~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD 304 (539)
T PLN02590 225 TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD 304 (539)
T ss_pred cCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC
Confidence 112555678889899999999998 588999876566789999999999542 33444455677899988
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEeccCcccccccceeeEEEcCH--HHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVA 321 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~--~~~~ 321 (470)
| +++|+++|++| ++|+.+|.+|+.+..-.... ..+..+. .-.=+...++|.+. ....+|.++... .+.+
T Consensus 305 p---l~~Ia~i~~~~-g~WlHVDaA~GG~al~~~~~r~~~~Gie---~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~ 376 (539)
T PLN02590 305 P---LVPLGNIAKKY-GIWLHVDAAYAGNACICPEYRKFIDGIE---NADSFNMNAHKWLF-ANQTCSPLWVKDRYSLID 376 (539)
T ss_pred C---HHHHHHHHHHh-CCeEEEecchhhhhhcChhhHHHhcCCc---cCCEEEECchhhcC-cCcCEEEEEecCHHHHHH
Confidence 8 89999999999 99999999999854321111 1111121 11234557899985 668889877654 2333
Q ss_pred HHHHHhhhc-----------------cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC
Q 012124 322 ACNKIQSQF-----------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 384 (470)
Q Consensus 322 ~l~~~~~~~-----------------~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 384 (470)
.+..-..+. ..+.-.+....+-..|+. ++.+.++++.+..-+..+++.+.+++.+++++..
T Consensus 377 a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~--~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~ 454 (539)
T PLN02590 377 ALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRL--YGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT 454 (539)
T ss_pred HhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence 332111101 111122222222223332 1356677888888889999999999988898765
Q ss_pred C-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHH
Q 012124 385 P-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKG 460 (470)
Q Consensus 385 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~ 460 (470)
+ .-+. +.+++......+. . ......++.++|.+...+.+.+ .......+||+++.. ++++++.+++.|.+.
T Consensus 455 ~~~l~i-VcFr~~~~~~~~~-~--~~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 455 TRYFSL-VCFRLAPVDGDED-Q--CNERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred CCceEE-EEEEecCCCCCHH-H--HHHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 4 4444 4555432100000 0 0001246666666664455544 333334589999875 789999999999998
Q ss_pred HHhhCCC
Q 012124 461 LLTLRPG 467 (470)
Q Consensus 461 l~~~~~~ 467 (470)
.+++.+.
T Consensus 530 a~~~~~~ 536 (539)
T PLN02590 530 ASKFTRN 536 (539)
T ss_pred HHHhccc
Confidence 8877653
No 335
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.67 E-value=2e-13 Score=136.06 Aligned_cols=312 Identities=19% Similarity=0.185 Sum_probs=188.1
Q ss_pred ChHHHHHHHHHHHHcCC-CCCCCC---cC--cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 012124 108 TPVLIAEAGINAIREGF-TRYTPN---AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 181 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~-~~y~~~---~g--~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~V 181 (470)
.++.+++++.+.+.... ..|.-. .| +..+++.+++++ |. +..+++++++.++.+++.. +.+||+|
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~----ga----e~alvv~sg~aAi~l~l~~-l~~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT----GA----EDALVVNNNAAAVLLALNT-LAKGKEV 163 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh----CC----CcEEEECCHHHHHHHHHHH-hCCcCEE
Confidence 47889999988876421 122111 11 245666666664 32 3456677788889888855 5899999
Q ss_pred EEcCCCCC---C---hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCc--c--cCCCHHHHHH
Q 012124 182 IIPAPFWV---S---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT--G--SVYPKNLLDE 251 (470)
Q Consensus 182 lv~~p~y~---~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPt--G--~~~s~~~~~~ 251 (470)
++.+..|. + +...++..|++++.++.+. ..+++++++++++++++|++.+++|++ | ...+ +++
T Consensus 164 Ivs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l~~ 236 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---IAE 236 (454)
T ss_pred EECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---HHH
Confidence 99886642 2 2345677899999998642 148899999999999999999999985 6 3667 889
Q ss_pred HHHHHHhCCCEEEEEeccccccc----cCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh
Q 012124 252 IARIVAKHPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 327 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~----~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~ 327 (470)
|+++|++| |+++|+|...+.+. |+-...+.+..... .+-.+++.|.+|.++-| ..|++++.+++++.++...
T Consensus 237 I~~la~~~-g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~ 312 (454)
T TIGR00474 237 LVALGREH-GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIA-AGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNP 312 (454)
T ss_pred HHHHHHHc-CCeEEEECCCcccccchhccCCCCcccccHhH-cCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhch
Confidence 99999999 99999998644321 11001122222211 34569999999998524 4899999998887654322
Q ss_pred hhccCCCChHHHHHHHHHH----hcCCC-----ChHHHHHHHHHHHHHHHHHHHHhccC--CCC--eecCCC----c---
Q 012124 328 SQFTSGASSISQKAGVAAL----GLGYA-----GGEVVSKMVKAFRERRDFLVKSFGEL--EGV--KMSEPQ----G--- 387 (470)
Q Consensus 328 ~~~~~~~~~~~q~a~~~~l----~~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~--~g~--~~~~~~----~--- 387 (470)
-.-..-.......++.+.+ +.... .-+.+....+..+++.+.+.+.|++. +++ ++.... +
T Consensus 313 l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~ 392 (454)
T TIGR00474 313 LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSL 392 (454)
T ss_pred hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCC
Confidence 1111112222222222222 21000 00112223345556677777777663 443 232211 1
Q ss_pred ------eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCC--EEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHH
Q 012124 388 ------AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ--VALVPGDAFGDDTCIRISYAA-SLTTLQAAVERI 457 (470)
Q Consensus 388 ------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--I~v~pg~~f~~~~~iRls~~~-~~~~i~~~l~~l 457 (470)
.+-+.++.... +..++.++|. +.. |..+ -.++.+.|.+.+ .+++++..+++|
T Consensus 393 p~~~l~~~~v~~~~~~~------------~~~~l~~~lr-~~~~~ii~r-----~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 393 PDERLPSYAVTLTPDGL------------SAEKLEARLR-ELPPPIIGR-----IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred cCCCCCeEEEEEecCCC------------CHHHHHHHHh-cCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 23233332211 6778888775 434 3332 135778888887 778888777765
No 336
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.67 E-value=1.9e-14 Score=139.29 Aligned_cols=327 Identities=17% Similarity=0.151 Sum_probs=190.4
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcC-CC------CCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEE---ecChHH
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREG-FT------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQ 165 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~-~~------~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~i---t~g~~~ 165 (470)
.|+|-..++- +++.+.+++...+.+. .. .|+...-..++.+...++..+.||. ++++..+ ..+++.
T Consensus 22 ~l~LiaSEN~--~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anvqp~SGs~ 97 (399)
T PF00464_consen 22 TLNLIASENY--MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANVQPHSGSQ 97 (399)
T ss_dssp SEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE---SSHHH
T ss_pred CccccCcccc--cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEeecCCchH
Confidence 3777666554 3566666666555442 11 2322333456666667777788885 4333322 356677
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHH-----HH-----HHcCCEEEEecCcCCCCCccCHHhHhhhcc-CCceEEEEc
Q 012124 166 SILQAVLAVCSPGDEVIIPAPFWVSYPE-----MA-----RIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILC 234 (470)
Q Consensus 166 al~~~~~~l~~~gd~Vlv~~p~y~~~~~-----~~-----~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l~ 234 (470)
|...++.+|++|||+|+..++...++.. .. .....+.+.++++++ ...+|.|.+++.+. .++++|++.
T Consensus 98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G 176 (399)
T PF00464_consen 98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKPKLIICG 176 (399)
T ss_dssp HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--SEEEEE
T ss_pred HHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCCCEEEEC
Confidence 8888999999999999988776655431 11 334578889999864 46799999999885 489999876
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc-cccCCCCcccccccCCCCCceEEEeccCcccccccceeeEE
Q 012124 235 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 235 ~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
.-.+|- .++ ++++.++|++. |.+|+.|-++.. +.-++.-+.|+ .. -.|+.+|..|+| +|-|-|.+
T Consensus 177 ~S~y~~--~~d---~~~~reIad~v-ga~l~~D~sH~~GLIa~g~~~~P~-~~-----ADvvt~sThKtl--~GPrggiI 242 (399)
T PF00464_consen 177 ASSYPR--PID---FKRFREIADEV-GAYLMADISHIAGLIAGGLFPNPF-PY-----ADVVTGSTHKTL--RGPRGGII 242 (399)
T ss_dssp -SSTSS--------HHHHHHHHHHT-T-EEEEE-TTTHHHHHTTSS--GC-CT-----SSEEEEESSGGG---SSS-EEE
T ss_pred chhccC--ccC---HHHHHHHHHhc-CcEEEecccccccceehheecCcc-cc-----ceEEEeeccccc--cccCceEE
Confidence 555542 344 77888889999 999999999764 33333322333 22 238899999997 88899999
Q ss_pred EcC--------------HHHHHHHHHHhhhccCCCChHHHHHH-HHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 012124 314 AGP--------------KHFVAACNKIQSQFTSGASSISQKAG-VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 378 (470)
Q Consensus 314 ~~~--------------~~~~~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 378 (470)
+.. .++.+++.+...+...+.+.....++ +.++... .....++..++.-++.+.|.+.|.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea--~~~~fk~Ya~qVv~NAk~La~~L~~~- 319 (399)
T PF00464_consen 243 LTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA--LSPEFKEYAKQVVKNAKALAEALQER- 319 (399)
T ss_dssp EES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred EEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 999 78999998766554433333333333 2333321 12334566667778888899999887
Q ss_pred CCeecCC-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC----CCC-CCCCCcEEEEeec------C
Q 012124 379 GVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP----GDA-FGDDTCIRISYAA------S 446 (470)
Q Consensus 379 g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p----g~~-f~~~~~iRls~~~------~ 446 (470)
|+++... ..+..+|+++... + .+..+. +..+++.||.+.. +.. ...+..|||+... .
T Consensus 320 G~~v~~ggTd~H~vlvd~~~~-~---------~~g~~a-~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~ 388 (399)
T PF00464_consen 320 GFKVVTGGTDNHQVLVDLRSF-G---------IDGKEA-EKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMK 388 (399)
T ss_dssp T-EEGGGS-SSSEEEEEGGGG-T---------S-HHHH-HHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--
T ss_pred CcEEEECCCCCCeEEEEeccc-c---------cchHHH-HHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCC
Confidence 8887642 2345688898542 0 144444 4456788998853 321 0123589999753 5
Q ss_pred HHHHHHHHH
Q 012124 447 LTTLQAAVE 455 (470)
Q Consensus 447 ~~~i~~~l~ 455 (470)
+++|++..+
T Consensus 389 e~dm~~iA~ 397 (399)
T PF00464_consen 389 EEDMKEIAE 397 (399)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 667666543
No 337
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.66 E-value=2.2e-13 Score=122.71 Aligned_cols=319 Identities=16% Similarity=0.147 Sum_probs=217.1
Q ss_pred HHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--H
Q 012124 115 AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--P 192 (470)
Q Consensus 115 a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~ 192 (470)
++.++...+..+|. .+....+-+.+-+-++.-|.. .++.-.++...++.+++.++-.++.|||.|++..-+-++. .
T Consensus 31 ~V~~A~~~~~lgh~-sPe~~qIm~~v~egikyVFkT-~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~ 108 (385)
T KOG2862|consen 31 RVQEAMSRPSLGHM-SPEFVQIMDEVLEGIKYVFKT-ANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAA 108 (385)
T ss_pred HHHHhhcCCccccC-CHHHHHHHHHHHHHHHHHhcc-CCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHH
Confidence 34444444556663 334444444444444333332 2344567777788899999999999999999877665553 4
Q ss_pred HHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc-CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEecccc
Q 012124 193 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 271 (470)
Q Consensus 193 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~ 271 (470)
+..+..|+++..++.+. +....++.+.+.+. .+++++++++....||+.-+. +..+-++|++| +.++++|.+-+
T Consensus 109 D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~-~~lllVD~VaS 183 (385)
T KOG2862|consen 109 DCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL--LAISGELCHKH-EALLLVDTVAS 183 (385)
T ss_pred HHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceEEEEecCccccccchH--HHHHHHHhhcC-CeEEEEechhh
Confidence 67899999999998764 45589999999884 589999999998899998772 34456788899 99999999877
Q ss_pred ccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh-----------------------
Q 012124 272 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS----------------------- 328 (470)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~----------------------- 328 (470)
-. + .+ ..+|+ ++..+....--|.++.| -.++.+...+...++++..+.
T Consensus 184 lg---g---t~-F~mDe-wgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~ 254 (385)
T KOG2862|consen 184 LG---G---TE-FEMDE-WGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPR 254 (385)
T ss_pred cC---C---cc-ceehh-hcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCccc
Confidence 41 1 12 22454 34444444446999743 346668888877777754432
Q ss_pred hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecC----CCceEEEeeeccCccCCccc
Q 012124 329 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE----PQGAFYLFIDFSTYYGSEAE 404 (470)
Q Consensus 329 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~----~~~g~~~~~~~~~~~~~~~~ 404 (470)
.+...+|....+.+.++|..- .++.+++..++.++..+++...|+++ |++... +.....-.+..|..+
T Consensus 255 ~yhhT~pv~lly~Lr~AL~~I--~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv----- 326 (385)
T KOG2862|consen 255 AYHHTPPVQLLYSLRAALALI--AEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV----- 326 (385)
T ss_pred ccccCCcHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCCC-----
Confidence 112235555566666666642 36788999999999999999999987 664321 111222345666654
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012124 405 GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 405 ~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~l~~ 463 (470)
|-.+++.++..+++|.+.-|-.-..+..+||.+.. +.+.|+..++.|+..+.+
T Consensus 327 ------Dw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 327 ------DWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ------CHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 88899999988877776554433346789999765 678899999888877654
No 338
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=3.6e-13 Score=125.87 Aligned_cols=336 Identities=15% Similarity=0.114 Sum_probs=216.7
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHcC-------CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIREG-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
..|.|=..++- .++.+.+++-..+.+. ...|+--.-..++.+...++..+.||. +--|+-..+|++ |.
T Consensus 27 ~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhSGs~-AN 101 (413)
T COG0112 27 EHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHSGSQ-AN 101 (413)
T ss_pred hceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCCchH-HH
Confidence 44666554443 4678888888877652 233444444556666667888888885 445677777776 45
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcC--CEEEEecCcCCCCCccCHHhHhhhcc-CCceEEEEcCCCCCcc
Q 012124 168 LQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIAD--ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTG 241 (470)
Q Consensus 168 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~i~l~~p~nPtG 241 (470)
..++.+|++|||+|+-.+-.+.++... +...| .+.+.++++.++ ..+|.|++++... .++|+|+.-...+|
T Consensus 102 ~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et-~~IDyD~~~k~a~e~kPK~ii~G~SaY~-- 178 (413)
T COG0112 102 QAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPET-GLIDYDEVEKLAKEVKPKLIIAGGSAYS-- 178 (413)
T ss_pred HHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccccc-CccCHHHHHHHHHHhCCCEEEECccccc--
Confidence 568889999999999877666655422 11222 577888887653 5699999999884 58998876444444
Q ss_pred cCCCHHHHHHHHHHHHhCCCEEEEEeccccc-cccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCH-HH
Q 012124 242 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HF 319 (470)
Q Consensus 242 ~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~-~~ 319 (470)
..++ ++++.++|.+. |.+++.|-+|-. +.-++.-+.|+. .-.|+.+|.+|+| +|-|-|.+.+.. ++
T Consensus 179 r~id---~~~~reIad~V-GA~L~~DmAHiaGLVA~G~~p~P~~------~AdvVTtTTHKTl--rGPrGG~Il~~~eel 246 (413)
T COG0112 179 RPID---FKRFREIADEV-GAYLMVDMAHVAGLIAGGVHPNPLP------HADVVTTTTHKTL--RGPRGGIILTNDEEL 246 (413)
T ss_pred cccC---HHHHHHHHHHh-CceEEehHHHHHHHHhcccCCCCCC------ccceEeCCcccCC--CCCCceEEEeccHHH
Confidence 3445 77888888899 999999999764 333332222222 2338899999997 788999999885 88
Q ss_pred HHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC-ceEEEeeeccCc
Q 012124 320 VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTY 398 (470)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~ 398 (470)
.+++.+...+... .+++.-.+++.+....+..+...++..++..++.+.|.+.|.+. |+++.... .+..+.+++...
T Consensus 247 ~kkin~aVFPg~q-ggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~ 324 (413)
T COG0112 247 AKKINSAVFPGLQ-GGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSK 324 (413)
T ss_pred HHHhhhhcCCccC-CChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccC
Confidence 8888875444332 34444444433333211123334555566667788888888876 88876432 234466777521
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC-CC-----CCCcEEEEeec------CHHHHHHHHHHHHHHHHh
Q 012124 399 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA-FG-----DDTCIRISYAA------SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~-f~-----~~~~iRls~~~------~~~~i~~~l~~l~~~l~~ 463 (470)
+ .+. .-++.++++.||.+.--.. |. .+..|||.... .++++++..+-|.++++.
T Consensus 325 -~---------~~G-k~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 325 -G---------LTG-KKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred -C---------CCH-HHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 0 033 3445566777998854222 22 24689998652 678888888888887764
No 339
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.65 E-value=6.8e-14 Score=139.79 Aligned_cols=339 Identities=11% Similarity=0.018 Sum_probs=192.2
Q ss_pred cCCCeEEccCCCCCCC--C-hHHHHHHHHHH-HHcCC---CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 92 AGVSVIRLAAGEPDFD--T-PVLIAEAGINA-IREGF---TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~--~-~~~~~~a~~~~-~~~~~---~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
+|+.++|+..|..... . ++.+.+++.++ ..... ..|. .....+|-+.+.+.+..... -.-+.++++++++
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~-~~~~~~la~~l~~~l~~~~p--~~~~~v~f~~SGs 132 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALG-NFPSKDWAKILKEGILKVAP--KGQDQVWTGMSGS 132 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCC-cHHHHHHHHHHHHhHHhhCC--CCcCEEEEeCCcH
Confidence 6778999998865433 2 78899999874 23221 1221 11122333333332222222 1236899999999
Q ss_pred HHHHHHHHHhcC--------------------------CC---CeEEEcCCCCCChHHHHHH-cCCE-----------EE
Q 012124 165 QSILQAVLAVCS--------------------------PG---DEVIIPAPFWVSYPEMARI-ADAT-----------PV 203 (470)
Q Consensus 165 ~al~~~~~~l~~--------------------------~g---d~Vlv~~p~y~~~~~~~~~-~g~~-----------~~ 203 (470)
+|.+.+++.... +| ..|+...-+|++....+.. .|.. ..
T Consensus 133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~ 212 (464)
T TIGR00699 133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWP 212 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCce
Confidence 999999987521 11 2699999999987654332 2211 11
Q ss_pred EecCcCCC-CC-----------ccCHHhHhhhcc---CCceEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEEe
Q 012124 204 ILPTRISE-NF-----------LLDPKVLESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSD 267 (470)
Q Consensus 204 ~v~~~~~~-~~-----------~~d~~~l~~~l~---~~~~~i~l~~p~nPtG~~~-s~~~~~~l~~~~~~~~~~~iI~D 267 (470)
.+|..... .+ .-+++.+++.+. +++.+|++...+...|... +++.+++|.++|++| |+++|.|
T Consensus 213 ~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~-g~lLI~D 291 (464)
T TIGR00699 213 QAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-NVAFIVD 291 (464)
T ss_pred ecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 12211000 00 013556777764 3566777755566668755 799999999999999 9999999
Q ss_pred ccccccccCCCCccccc--ccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHH
Q 012124 268 EIYEHIIYAPATHTSFA--SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 345 (470)
Q Consensus 268 d~~~~~~~~~~~~~~~~--~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~ 345 (470)
|++..|...+.. .... .+.. .-. +.+|+|.++ .| |+++..+ .+..........+++.+++...++.+.
T Consensus 292 EV~tGfGrtG~~-fa~e~~gv~~--~PD--i~t~gK~lg-~g---G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~ 361 (464)
T TIGR00699 292 EVQTGVGATGKF-WAHEHWNLDD--PPD--MVTFSKKFQ-TA---GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREI 361 (464)
T ss_pred eeeeCCCCCcch-hHHHhcCCCC--CCC--EEEehhhhc-cC---Cccccch-hccCCCCcccccCCCCCHHHHHHHHHH
Confidence 999876443321 1111 1210 011 466899995 33 4444432 211111122345667888888888777
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCC-Ceec-CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcC
Q 012124 346 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG-VKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 423 (470)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 423 (470)
|+.-.. ++..++..+.=+..++.|.+...++|. +.-. ....|+++-+++++.. ....+.+.++++
T Consensus 362 L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-----------~~~~i~~~~~~~- 428 (464)
T TIGR00699 362 IQEIKR-KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-----------KRDKLLKKARNN- 428 (464)
T ss_pred HHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-----------HHHHHHHHHHHC-
Confidence 653110 222222222222222333222223432 2211 1245776777775420 245677777766
Q ss_pred CEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 424 QVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 424 gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
||.+.+. ..+.+||.... +++++++++++|.+++
T Consensus 429 Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 429 GVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 9988763 23679998775 9999999999998763
No 340
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.64 E-value=1.9e-13 Score=137.00 Aligned_cols=339 Identities=11% Similarity=0.093 Sum_probs=192.4
Q ss_pred cCCCeEEccCCCCC--CCC-hHHHH--HHHHHHHHcCCCC-CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 92 AGVSVIRLAAGEPD--FDT-PVLIA--EAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~~-~~~~~--~a~~~~~~~~~~~-y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
+|+.+||+..|... +.. ++.+. +++.+++.+.... .....-..+....+++.+.+..+. -..+.+++++++++
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~f~~sGsE 114 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGD-PALPHLFFIEGGAL 114 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCC-CCcCEEEEeCCcHH
Confidence 46778999888543 333 67777 8888887653211 111111223344455555433211 13468999999999
Q ss_pred HHHHHHHHhcC--------C------CCeEEEcCCCCCChHHHHHH-cCCE-EE--EecC--------c----C--CCCC
Q 012124 166 SILQAVLAVCS--------P------GDEVIIPAPFWVSYPEMARI-ADAT-PV--ILPT--------R----I--SENF 213 (470)
Q Consensus 166 al~~~~~~l~~--------~------gd~Vlv~~p~y~~~~~~~~~-~g~~-~~--~v~~--------~----~--~~~~ 213 (470)
|.+.+++.... . +.+|+...-+|++....+.. .|.. .. ..|. . + ....
T Consensus 115 Ave~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 194 (431)
T TIGR03251 115 AVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNL 194 (431)
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccccc
Confidence 99999887521 1 36799999999987654332 2211 00 0010 0 0 0000
Q ss_pred c-------cCHHhHhhhcc---CCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcc-
Q 012124 214 L-------LDPKVLESKLT---EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT- 281 (470)
Q Consensus 214 ~-------~d~~~l~~~l~---~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~- 281 (470)
. -+++.+++.+. +++.++++...+.-.|. ..+++.+++|.++|++| |+++|.||++..|...+....
T Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~~a~ 273 (431)
T TIGR03251 195 DQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH-DALLIFDEVQTGVGLTGTAWAY 273 (431)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhccCccchHHHH
Confidence 0 12344555552 46777777655666675 46889999999999999 999999999998644432100
Q ss_pred cccccCCCCCceEEEeccCcccccccceeeEEEcCH--HHHHHH-H-HHhhhccCCCChHHHHHHHHHHhcCCCChHHHH
Q 012124 282 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVAAC-N-KIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 357 (470)
Q Consensus 282 ~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~--~~~~~l-~-~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 357 (470)
....+.+ | +-+++|.+. . .|++.... ++.... . ......+++.+++...++.+.|+.-.. +..++
T Consensus 274 ~~~gv~P--D----i~~~gK~~~-~---~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~ 342 (431)
T TIGR03251 274 QQLGVQP--D----IVAFGKKTQ-V---CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE-ERLVD 342 (431)
T ss_pred HhcCCCC--C----EEEecccCc-c---ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh-cCHHH
Confidence 1112222 1 234789862 2 25665443 222211 1 011234566888888888887764110 12233
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012124 358 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 437 (470)
Q Consensus 358 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~ 437 (470)
++++.-+..++.|.+...+.+++.......|+++.++++... ....+++.|+++ ||.+.|.. .+
T Consensus 343 ~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~-Gvl~~~~g----~~ 406 (431)
T TIGR03251 343 NARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-----------DRDEVIRQLYRE-GVLLLGCG----ER 406 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-----------HHHHHHHHHHhC-CeEEecCC----CC
Confidence 333333333444443333343332222233666677776420 345678887755 99997743 25
Q ss_pred cEEEEeec--CHHHHHHHHHHHHH
Q 012124 438 CIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 438 ~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
.+|++... +++++++++++|.+
T Consensus 407 ~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 407 SIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eEEEECCccCCHHHHHHHHHHHHh
Confidence 68887664 99999999999875
No 341
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.63 E-value=4.9e-13 Score=143.77 Aligned_cols=305 Identities=17% Similarity=0.151 Sum_probs=196.6
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEec-ChHHHHHHHHHHh----cCCCC----eEEEcCCCCCChHHHHHHcCCE
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSILQAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADAT 201 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~-g~~~al~~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~g~~ 201 (470)
+|..++...+.+++.+..|.+ ++.+.. |++++....+.++ .++|| +|++++..|......+...|++
T Consensus 538 qG~l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~ 613 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK 613 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence 678899999999999988853 455544 5555443333222 35665 5999999998888889999999
Q ss_pred EEEecCcCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCC
Q 012124 202 PVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 278 (470)
Q Consensus 202 ~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~ 278 (470)
++.++.+.++ .+|++.|++++++ ++.+|++++|++-++...+ +++|+++|+++ |+++++|.++......
T Consensus 614 vv~v~~d~~G--~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~-G~~v~VDgA~~~al~~-- 685 (954)
T PRK05367 614 VVVVACDENG--NIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEH-GGQVYLDGANMNAQVG-- 685 (954)
T ss_pred EEEECCCCCC--CcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHc-CCEEEEECcChhhccC--
Confidence 9999997543 5999999999965 4667777888765444567 89999999999 9999999998632111
Q ss_pred CcccccccCCCCCceEEEeccCcccc----cccceeeEEEcCHHHHHHHHHHh-----h---hccCCCChHHHHH----H
Q 012124 279 THTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKIQ-----S---QFTSGASSISQKA----G 342 (470)
Q Consensus 279 ~~~~~~~~~~~~~~~i~i~S~sK~~~----~~G~r~G~~~~~~~~~~~l~~~~-----~---~~~~~~~~~~q~a----~ 342 (470)
+.. +...+-.++..|.+|+|+ ..|-.+|++.+.+++...+-... . ....+++.+.|.. +
T Consensus 686 ----l~~-pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a 760 (954)
T PRK05367 686 ----LAR-PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPIS 760 (954)
T ss_pred ----CCC-hhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHH
Confidence 111 112345588899999974 23344778887765544332111 0 0111223332211 2
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc----eEEE-eeeccCccCCcccCCCCCCCHHHHHH
Q 012124 343 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYL-FIDFSTYYGSEAEGFGKIENSESLCR 417 (470)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 417 (470)
..++.. .+.+.+++..+..-.+.+++.+.|++...+.+..+.+ .+.+ +..++... ..+..++.+
T Consensus 761 ~~yi~~--~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~---------g~~~~di~k 829 (954)
T PRK05367 761 WMYIRM--MGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKEST---------GITVDDIAK 829 (954)
T ss_pred HHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccC---------CCCHHHHHH
Confidence 223322 1356677777766788889999887643443333221 1212 11222210 015688999
Q ss_pred HHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 418 YLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 418 ~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
+|. ++|+.... ..|..++.++++++. +.++|+.+++.+..+.+++.
T Consensus 830 rL~-d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 830 RLI-DYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred HHH-HCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 986 45887654 335557889999886 88999999999988876654
No 342
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.62 E-value=7.9e-13 Score=138.90 Aligned_cols=313 Identities=16% Similarity=0.145 Sum_probs=197.2
Q ss_pred CCCCC---CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc----C---C-CCeEEEcCCCCCChHH
Q 012124 125 TRYTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC----S---P-GDEVIIPAPFWVSYPE 193 (470)
Q Consensus 125 ~~y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~----~---~-gd~Vlv~~p~y~~~~~ 193 (470)
+-|.| .+|+.++...+.+++.+..|.+.. .+.-. ++.++-...+.++. . + .++|+++.-.|.....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~-sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa 606 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQPN-SGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA 606 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecCC-chHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence 66777 799999999999999998886533 23233 34444434444432 1 2 3678888877765556
Q ss_pred HHHHcCCEEEEecCcCCCCCccCHHhHhhhcc---CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccc
Q 012124 194 MARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 270 (470)
Q Consensus 194 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~ 270 (470)
.+...|++++.++.+.++ .+|+++|++.++ +++.+|.+++|++-++. .+.+++|+++|+++ |+++++|.++
T Consensus 607 sa~~~GieVv~Vp~D~~G--~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~-Galv~vDgA~ 680 (954)
T PRK12566 607 SAQMAGMRVVIVECDPDG--NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQH-GGQVYMDGAN 680 (954)
T ss_pred HHHHCCCEEEEeccCCCC--CcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHc-CCEEEEEeeC
Confidence 678899999999997544 599999999996 56777777888775544 34499999999999 9999999988
Q ss_pred cccccCCCCcccccccCCCCCceEEEeccCccccc----ccceeeEEEcCHHHHHHHHHHh------------hhccCCC
Q 012124 271 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNKIQ------------SQFTSGA 334 (470)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~----~G~r~G~~~~~~~~~~~l~~~~------------~~~~~~~ 334 (470)
.--. ..+.. +...+-.|+.+++.|+|+. .|.-+|.+...+++...+.... .....+.
T Consensus 681 ~~a~------~~l~~-Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~ 753 (954)
T PRK12566 681 LNAQ------VGLAR-PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPW 753 (954)
T ss_pred hhhc------cCCCC-hhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeeccc
Confidence 5211 11111 1124556999999998852 2333555555554444333221 0001111
Q ss_pred -ChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEE--EeeeccCccCCcccCCCCCCC
Q 012124 335 -SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIEN 411 (470)
Q Consensus 335 -~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 411 (470)
+.....++..++.. .+.+ +.+.......+.+++.+.|.+..++.+.++.+.++ +.++++...+ . ...+
T Consensus 754 gsa~~l~~A~~Yi~~--lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~--~----~g~~ 824 (954)
T PRK12566 754 GSASILPISWMYIAM--MGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKA--Q----TGIS 824 (954)
T ss_pred chHHHHHHHHHHHHH--HCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEcccccc--c----cCCC
Confidence 11122334444443 1345 66666666778888999987643555533222211 1223321100 0 0126
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012124 412 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 412 ~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~ 464 (470)
..++.++|. ++||...- ..|...+++|++.+. +.++|+.+++.|+++.++.
T Consensus 825 ~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 825 EEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred HHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 688999998 55886543 345457899999986 8899999999998887763
No 343
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.62 E-value=3.5e-13 Score=124.62 Aligned_cols=155 Identities=17% Similarity=0.246 Sum_probs=123.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCc
Q 012124 133 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTR 208 (470)
Q Consensus 133 ~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~ 208 (470)
...|.+.|+..- -|+ --+.+++++.|+..++..+.++||.|+-..--|.+..+. ++.+|.++..+..
T Consensus 64 ~~vlE~RiAaLE---GG~-----aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~- 134 (426)
T COG2873 64 TDVLEERIAALE---GGV-----AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP- 134 (426)
T ss_pred HHHHHHHHHHhh---cch-----hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC-
Confidence 345666666542 122 346677888999999999999999999998888876654 5778999999874
Q ss_pred CCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCC
Q 012124 209 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 288 (470)
Q Consensus 209 ~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~ 288 (470)
.|++.+++++++++|+||+.+..||.+.+.+ +++|+++|+++ ++++|+|..+..- .-+..++
T Consensus 135 ------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~-gvpliVDNT~atp-------yl~rP~~- 196 (426)
T COG2873 135 ------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRH-GVPLIVDNTFATP-------YLCRPIE- 196 (426)
T ss_pred ------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHc-CCcEEEecCCCcc-------eecchhh-
Confidence 3899999999999999999999999999999 99999999999 9999999988641 1112222
Q ss_pred CCCceEEEeccCcccccccceeeEEEc
Q 012124 289 MWERTLTVNGFSKAFAMTGWRLGYIAG 315 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~G~~~~ 315 (470)
++-.|++.|.+|.+|-.|--+|-++.
T Consensus 197 -hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 197 -HGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred -cCCCEEEEeecccccCCccccceEEE
Confidence 56779999999999767877776664
No 344
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=4.2e-13 Score=125.57 Aligned_cols=343 Identities=13% Similarity=0.094 Sum_probs=219.5
Q ss_pred cCCCeEEccCCCCCCC---ChHHHHHHHHHHHHcC---CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 92 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~---~~~~~~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
.|+++||+..+-.... ..|++.+++.+....- ...|..-. ..++.+.+.+.+.+ -+.+.|.+.+++++
T Consensus 54 ~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsGTe 127 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSGTE 127 (433)
T ss_pred CcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCCcH
Confidence 6778999988763222 2688888888887653 22332211 33444444444322 27789999999999
Q ss_pred HHHHHHHHhcC------CCC--eEEEcCCCCCChH-HHHHHcCCEEEEecCcCCC-----CCccCHHhHhhhccCC---c
Q 012124 166 SILQAVLAVCS------PGD--EVIIPAPFWVSYP-EMARIADATPVILPTRISE-----NFLLDPKVLESKLTEK---S 228 (470)
Q Consensus 166 al~~~~~~l~~------~gd--~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~-----~~~~d~~~l~~~l~~~---~ 228 (470)
|.+.+++.-.+ +-+ .|+...-+|++-. ..+...+......|.++-- ..--|...+++.++.+ +
T Consensus 128 Ane~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~I 207 (433)
T KOG1401|consen 128 ANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEI 207 (433)
T ss_pred HHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCce
Confidence 99998886432 112 3777777777654 3444344444444432110 0012788899988653 4
Q ss_pred eEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCC-cccccccCCCCCceEEEeccCcccccc
Q 012124 229 RLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLPGMWERTLTVNGFSKAFAMT 306 (470)
Q Consensus 229 ~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~-~~~~~~~~~~~~~~i~i~S~sK~~~~~ 306 (470)
.++++...+--.|. ..+++.+..|...|+++ |+++|.||++..|...+.. ...+...-++ |.++.|.++ .
T Consensus 208 aAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~-~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD------I~t~aK~L~-g 279 (433)
T KOG1401|consen 208 AAVIVEPIQGAGGIIPADPEFLIGLRKECDDN-GVLLIFDEVQTGLGRLGYGWAQEYFGVTPD------ITTVAKPLG-G 279 (433)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHhhc-CceEEeehhhhCccccchHHHHHHhCcCCc------ceeehhhcc-C
Confidence 66776655666775 56889999999999999 9999999999986544321 1111122222 677889998 9
Q ss_pred cceeeEEEcCHHHHHHHHHHhh---hccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeec
Q 012124 307 GWRLGYIAGPKHFVAACNKIQS---QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 383 (470)
Q Consensus 307 G~r~G~~~~~~~~~~~l~~~~~---~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 383 (470)
|+++|..++.+++.+.+..-.. ..+++.++++..++...++.-.. .++++++.+.-+..++.+.+.+.+.+....-
T Consensus 280 GlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~-~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g 358 (433)
T KOG1401|consen 280 GLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKD-PETLKNVSKIGKELRKLLDEYLKKTPNSICG 358 (433)
T ss_pred CceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhccCCCceee
Confidence 9999999999999998875443 66788999999999888876432 6888888888888888899988875432221
Q ss_pred CCCceEEEeeeccCccCCcccCCCCCCCHH----HH----HHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHH
Q 012124 384 EPQGAFYLFIDFSTYYGSEAEGFGKIENSE----SL----CRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVE 455 (470)
Q Consensus 384 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~l----~~~L~~~~gI~v~pg~~f~~~~~iRls~~~~~~~i~~~l~ 455 (470)
.-..++++.+.+..+... ..|.. .+ ...+++ .||.+.|-. -+++.+++|.++..++
T Consensus 359 ~~grgl~ig~~~~~p~~~-------~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~--------~l~~~~~~E~i~~~l~ 422 (433)
T KOG1401|consen 359 GVGRGLVIGFEFEGPVYK-------FADAAREQGLLILTLGKGLLE-EGVRIAPIY--------LLTVEHTPEVIQRLLT 422 (433)
T ss_pred eeeeEEEEEEEEeechhh-------hhhhhhhhhHHHHHHhccccc-ceEEEeccc--------cccccCcHHHHHHHHH
Confidence 134455555444322110 00111 11 111222 255555511 1333446889999999
Q ss_pred HHHHHHHhhC
Q 012124 456 RIKKGLLTLR 465 (470)
Q Consensus 456 ~l~~~l~~~~ 465 (470)
.+.+.++++.
T Consensus 423 i~~~~l~~~~ 432 (433)
T KOG1401|consen 423 ILEKVLSALN 432 (433)
T ss_pred HHHHHHHHhc
Confidence 9999887653
No 345
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.59 E-value=8.9e-13 Score=136.03 Aligned_cols=176 Identities=19% Similarity=0.179 Sum_probs=122.6
Q ss_pred CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH-HHHcCCEEEEe
Q 012124 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVIL 205 (470)
Q Consensus 127 y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v 205 (470)
...+.|...--+..+.. .|| ...-.++++|++.++..++.+++.+||.|+++.-||-+..+. +...|+.++++
T Consensus 169 L~~~eG~i~eAq~~AA~---~fg---Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl 242 (720)
T PRK13578 169 LLIHEGAAKDAQKHAAK---VFN---ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYL 242 (720)
T ss_pred CCCCChHHHHHHHHHHH---HhC---CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEe
Confidence 33455554333333333 355 345788999999999999999999999999999999998885 88999999998
Q ss_pred cCcCCCCCc----cCHHh-----HhhhccCC----------ceEEEEcCCCCCcccCCCHHHHHHHHHH-HHhCCCEEEE
Q 012124 206 PTRISENFL----LDPKV-----LESKLTEK----------SRLLILCSPSNPTGSVYPKNLLDEIARI-VAKHPRLLVL 265 (470)
Q Consensus 206 ~~~~~~~~~----~d~~~-----l~~~l~~~----------~~~i~l~~p~nPtG~~~s~~~~~~l~~~-~~~~~~~~iI 265 (470)
.... +.++ ++.+. +++++.+. .+++++++|++ -|++++ +++|++. ++.+ + .|+
T Consensus 243 ~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~-~-~ll 315 (720)
T PRK13578 243 ETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLC-D-YIL 315 (720)
T ss_pred eccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccC-C-cEE
Confidence 7654 2233 35444 77777543 58888898887 699999 7888888 6777 7 899
Q ss_pred Eeccccc-cccCCC--Ccccc-cccCCCCCceEEEeccCcccccccceee-EEEcCH
Q 012124 266 SDEIYEH-IIYAPA--THTSF-ASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPK 317 (470)
Q Consensus 266 ~Dd~~~~-~~~~~~--~~~~~-~~~~~~~~~~i~i~S~sK~~~~~G~r~G-~~~~~~ 317 (470)
+||+|+. +.|... ..+.. .....+...++++.|.+|.+ +++.-+ ++....
T Consensus 316 vDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk~ 370 (720)
T PRK13578 316 FDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKKD 370 (720)
T ss_pred EeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcCC
Confidence 9999985 334321 11111 22222234679999999998 455444 444533
No 346
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.59 E-value=8.5e-13 Score=131.51 Aligned_cols=280 Identities=15% Similarity=0.146 Sum_probs=196.6
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC-----C---CC
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-----P---GD 179 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~-----~---gd 179 (470)
+++...+.+...+.++.......++..++.+.+..++.+.++.+ ..-.=.+|+|+++++.+.+.+..+ . +.
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~ 152 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESG 152 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhccc
Confidence 46677788888887766655555588999999999999999875 334567899999999877776421 1 11
Q ss_pred ------eEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceE--EEEcCCCCCcccCCCHHHHHH
Q 012124 180 ------EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL--LILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 180 ------~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~--i~l~~p~nPtG~~~s~~~~~~ 251 (470)
+|+++.-.|.++...++.+|.+...+++++. .+.+|++++++++++.+.. |+-+.++.+||.+=+ +++
T Consensus 153 ~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~~ 228 (460)
T COG0076 153 KPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IEE 228 (460)
T ss_pred ccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HHH
Confidence 6999999999999999999999999999865 6779999999999876665 777888899999888 999
Q ss_pred HHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH-HHHHHHHHhhhc
Q 012124 252 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQF 330 (470)
Q Consensus 252 l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~ 330 (470)
|.++|+++ ++|+++|.+|+.+...-......+.+ ......-+.-+++|.. +.-..+||++.+++ -..+.......+
T Consensus 229 ia~ia~~~-~i~lHVDAA~GG~~~pf~~~~~~~~f-~l~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~y 305 (460)
T COG0076 229 LADIAEEY-GIWLHVDAAFGGFLLPFLEPDGRWDF-GLEGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYY 305 (460)
T ss_pred HHHHHHHc-CCcEEEEccccceeecccCccchhhc-CCCCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhccccc
Confidence 99999999 99999999999865321111111111 1112234556899987 57788999998765 333333222111
Q ss_pred c---------CCCChHH-HHHHH-HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeeeccC
Q 012124 331 T---------SGASSIS-QKAGV-AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 397 (470)
Q Consensus 331 ~---------~~~~~~~-q~a~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~ 397 (470)
. ...+..+ +.++. ..+.. ++.+.++++.++..+..+.+.+.|++.+.+++..+.....+.++.++
T Consensus 306 l~~~~~~~~ti~~sr~~~~~~~~~~~l~~--lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 306 LPGGGIPNFTILGSRPGRQALALYANLRR--LGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred CCCCCcCceeEeeccchHHHHHHHHHHHH--hCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 1 1112222 22222 22222 13577888888888999999999999866887654344446677754
No 347
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.59 E-value=3.3e-12 Score=135.13 Aligned_cols=314 Identities=15% Similarity=0.113 Sum_probs=199.6
Q ss_pred CCCCCC---CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc--------CCCCeEEEcCCCCCChH
Q 012124 124 FTRYTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYP 192 (470)
Q Consensus 124 ~~~y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~ 192 (470)
.+-|.| .+|..++...+.+++.+..|.+ .-.+ ..+|+.++-...+.++. ...++|+++.-.+....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~Sl-~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AISL-QPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--Cccc-CCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 344543 3688899999999999988975 2223 33444444433333322 12367999999987777
Q ss_pred HHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc---CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEecc
Q 012124 193 EMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 269 (470)
Q Consensus 193 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~ 269 (470)
..++..|++++.++.+.++ .+|+++|++.++ +++++|++++|+| +|..-+ .+++|+++|+++ |.++++|.+
T Consensus 593 asa~~~G~~Vv~V~~d~~G--~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~-G~~v~VDgA 666 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQDG--NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSF-GGQVYLDGA 666 (939)
T ss_pred HHHHHCCCEEEEeccCCCC--CcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHc-CCEEEEEec
Confidence 7789999999999987443 599999999997 4888999999999 777643 288999999999 999999999
Q ss_pred ccccccCCCCcccccccCCCCCceEEEeccCcccc----cccceeeEEEcCHHHHHHHHHH---------------hhhc
Q 012124 270 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKI---------------QSQF 330 (470)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~----~~G~r~G~~~~~~~~~~~l~~~---------------~~~~ 330 (470)
+..-.. .+. -+...+-.++++|..|+|+ ..|-.+|++.+.+++...+-.. ....
T Consensus 667 q~~al~------~l~-~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s 739 (939)
T TIGR00461 667 NMNAQV------GLT-SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVS 739 (939)
T ss_pred ChhhCC------CCC-CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccc
Confidence 853111 111 1122455688999999774 3555679999887655443200 0011
Q ss_pred cCC-CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC-ceEE---EeeeccCccCCcccC
Q 012124 331 TSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFY---LFIDFSTYYGSEAEG 405 (470)
Q Consensus 331 ~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~---~~~~~~~~~~~~~~~ 405 (470)
+.+ .+......+..+|.. ++.+.+++..+..-.+.+++.+.|.+. +++..+. .+.+ +.++++.. .+
T Consensus 740 ~~~~g~a~~~l~a~~yi~~--lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~--~~--- 810 (939)
T TIGR00461 740 AAPYGSASILPISWMYIKM--MGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPL--KA--- 810 (939)
T ss_pred ccccCcHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccch--hh---
Confidence 111 121222333344443 146778888888888999999999763 3433221 2221 23455421 00
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012124 406 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 406 ~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~--~~~~~i~~~l~~l~~~l~~~~ 465 (470)
....+..++.++|.+. |+.... ..|-..+.+-+..+ .+.++|+.+++.+.++-+++.
T Consensus 811 -~~g~~~~dIakrL~d~-G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 811 -KTGIEAIDVAKRLQDY-GFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred -hcCCCHHHHHHHHHhC-Ceeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 0112678999999876 876433 33444455444444 488999999988877766543
No 348
>PLN02263 serine decarboxylase
Probab=99.59 E-value=1.2e-11 Score=122.37 Aligned_cols=294 Identities=11% Similarity=0.036 Sum_probs=197.7
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCcC
Q 012124 132 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRI 209 (470)
Q Consensus 132 g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 209 (470)
+..++.+.+.+|+.+.+|.+-+.-.=++|+|+++++...+.+..+ +...|++++-+|.+...+++.+|.+++.||++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 678999999999999999643221347899999999887776533 33478889999999999999999999999996
Q ss_pred CCCCccCHHhHhhhccCC---ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE-----EEEEeccccccccCCCCcc
Q 012124 210 SENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL-----LVLSDEIYEHIIYAPATHT 281 (470)
Q Consensus 210 ~~~~~~d~~~l~~~l~~~---~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~-----~iI~Dd~~~~~~~~~~~~~ 281 (470)
.++.+|++.|++++.++ +-+|+.+..+.++|.+=| +++|.++|+++ |+ |+.+|.+|+.+........
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~-g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEEC-GFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHc-CCccCCeeEEEeccchhhHhhhcccc
Confidence 44569999999999654 334445667889999988 88889999998 86 9999999987643111111
Q ss_pred cccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhh-----ccCCCChHHH--HHHHHHHhcCCCChH
Q 012124 282 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ-----FTSGASSISQ--KAGVAALGLGYAGGE 354 (470)
Q Consensus 282 ~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~-----~~~~~~~~~q--~a~~~~l~~~~~~~~ 354 (470)
+...+. ..-.=+.-+.+|.++ ....+|.++...+.++.+..-..+ .+...+.... ..+-..|.. ++.+
T Consensus 284 ~~~df~--~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~--~G~~ 358 (470)
T PLN02263 284 PKVTFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR--KGYR 358 (470)
T ss_pred cccCCC--cCccEEEECCccccC-CCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH--hCHH
Confidence 111121 112224456789986 668899999887665444221111 1122222222 222233332 2456
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCe-ecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012124 355 VVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433 (470)
Q Consensus 355 ~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f 433 (470)
.+++..+...+..+++.+.|++. |+. +..|.... +.++.|. ... ..+ |-.+.+
T Consensus 359 G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~-V~f~~p~--------------~~~-----~~~-gW~L~~---- 412 (470)
T PLN02263 359 GFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSST-VVFERPK--------------DEE-----FVR-RWQLAC---- 412 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceE-EEEecCc--------------hHH-----hhc-ceEEcc----
Confidence 77778888888899999999888 654 45566555 4444432 111 122 555543
Q ss_pred CCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 434 GDDTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 434 ~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
.++.+++.++. +.+.++++++.|++..+.
T Consensus 413 -~~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 413 -QGNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred -CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 23568998886 789999999999887663
No 349
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.58 E-value=6.1e-13 Score=129.47 Aligned_cols=314 Identities=12% Similarity=0.060 Sum_probs=200.7
Q ss_pred HHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEcCCCCCC
Q 012124 112 IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVS 190 (470)
Q Consensus 112 ~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~ 190 (470)
.++++.+.+-. ..++ ++...++-+.+.+.+++.++.+.+.+-++++.|++.+++.++..++ ++||.|++.. .|..
T Consensus 19 ~~~~~~~~~~~-~~HR--s~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~ 94 (374)
T TIGR01365 19 SIEELKNAPLG-RSHR--SKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK 94 (374)
T ss_pred hHHHHhhhhcc-cCcC--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH
Confidence 55566554332 2222 3355677777788888888853233346779999999999999998 5899998854 3332
Q ss_pred h-H-HHHHHcCC-EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEe
Q 012124 191 Y-P-EMARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 267 (470)
Q Consensus 191 ~-~-~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~D 267 (470)
- . ++++..|+ ++..+... -+..+|++.++. . +.+++++.-..||+..+. ++++.. .+ +.++|+|
T Consensus 95 r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~--~~-~~lliVD 161 (374)
T TIGR01365 95 GWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPA--DR-EGLTICD 161 (374)
T ss_pred HHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheeccc---cccccc--cC-CCcEEEE
Confidence 2 3 67788999 47777654 344589999874 1 225556556689999984 444421 25 7899999
Q ss_pred ccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHh--------------------
Q 012124 268 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------------- 327 (470)
Q Consensus 268 d~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~-------------------- 327 (470)
.+-+.. + .+..+. +-.+++.|.-|.+++|+ .++++++.++.+++.....
T Consensus 162 avSs~g---~-~~l~~d------~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~ 230 (374)
T TIGR01365 162 ATSAAF---A-QDLDYH------KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKK 230 (374)
T ss_pred ccchhc---C-CCCChh------HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhh
Confidence 887642 1 112222 24478888999997543 4788898888777655211
Q ss_pred ---hhccCCCChHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHHHHHHhccCCCCeecCC----CceEEEeeeccCc-
Q 012124 328 ---SQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTY- 398 (470)
Q Consensus 328 ---~~~~~~~~~~~q~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~~g~~~~~~~~~~- 398 (470)
..+...++....+++..+|+.- .+ ..++.+.++++++.+.+++.+++++.+.+... .+.....+.++..
T Consensus 231 ~~~~~t~~TP~v~~l~a~~~~l~~i--~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~ 308 (374)
T TIGR01365 231 IFEGSTINTPSMLCVEDWLDALKWA--ESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPA 308 (374)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCcc
Confidence 1122233444444445555420 02 24888999999999999999999832555432 2333344555432
Q ss_pred cCCcccCCCCCCC-----HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 399 YGSEAEGFGKIEN-----SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 399 ~~~~~~~~~~~~~-----~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
+... .++ ..++.+.|.++ ||.+.+|..-..+..|||+... +.++++.++..|.=+.+
T Consensus 309 ~~~~------~~~~~~~~~~~~~~~l~~~-gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 309 IDAL------DEDAQADFAKELISTLEKE-GVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred cccc------ccchhhHHHHHHHHHHHHC-CEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 1000 001 46788777665 9999988654345789999776 89999999998875544
No 350
>PRK15029 arginine decarboxylase; Provisional
Probab=99.58 E-value=3.6e-12 Score=132.89 Aligned_cols=172 Identities=15% Similarity=0.167 Sum_probs=124.8
Q ss_pred CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCc
Q 012124 129 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 208 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 208 (470)
.+.|...--+.++..+ || .....++++|++.++..++.+++++||.|+++.-||-+..+.+...|+++++++..
T Consensus 202 ~p~G~I~eAq~~aA~~---fg---A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 202 DHTGAFGESEKYAARV---FG---ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPS 275 (755)
T ss_pred CCCcHHHHHHHHHHHH---hC---CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence 4455544333333333 55 44678999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCc----cC-----HHhHhhhccC--Cce--------EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEecc
Q 012124 209 ISENFL----LD-----PKVLESKLTE--KSR--------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 269 (470)
Q Consensus 209 ~~~~~~----~d-----~~~l~~~l~~--~~~--------~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~ 269 (470)
. +.++ ++ ++.+++++.. ..+ ++++++|++ -|++.+ +++|++.|+++ ++.|++||+
T Consensus 276 ~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEA 349 (755)
T PRK15029 276 R-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKT-SDRLHFDEA 349 (755)
T ss_pred c-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhc-CCeEEEECc
Confidence 3 2222 34 8889888843 333 888999987 689999 88999999999 999999999
Q ss_pred ccc-cccCCCCccccccc-----CCCCCceEEEeccCcccccccceeeE-EEc
Q 012124 270 YEH-IIYAPATHTSFASL-----PGMWERTLTVNGFSKAFAMTGWRLGY-IAG 315 (470)
Q Consensus 270 ~~~-~~~~~~~~~~~~~~-----~~~~~~~i~i~S~sK~~~~~G~r~G~-~~~ 315 (470)
|+. +.|... .+....+ ......++++.|.+|++ |++.-|. +..
T Consensus 350 hGah~~F~~~-~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 350 WYGYARFNPI-YADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cccccccCcc-ccccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 975 444331 2211222 11123359999999998 4555454 434
No 351
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.57 E-value=5.1e-14 Score=136.86 Aligned_cols=222 Identities=21% Similarity=0.269 Sum_probs=136.7
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCC----ccCH-----HhHhhh
Q 012124 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF----LLDP-----KVLESK 223 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~----~~d~-----~~l~~~ 223 (470)
.....++++|++.++..++.++++|||.|+++.-+|-+..+.+...|+++++++.. ++.+ .+++ +.++++
T Consensus 81 Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~~~gi~~~i~~~~~~~~~i~~~ 159 (417)
T PF01276_consen 81 ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DNEYGIIGGISPDEFNEEDIEEA 159 (417)
T ss_dssp ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-TTS-BEEB-GGGGSHHHHHHH
T ss_pred CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-ccccCCccCCChhhhhHHHHHHH
Confidence 44578899999999999999999999999999999999999999999999999876 3332 3466 888888
Q ss_pred ccC--Cce---EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc-cccCCCCccccccc---CCCCCceE
Q 012124 224 LTE--KSR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASL---PGMWERTL 294 (470)
Q Consensus 224 l~~--~~~---~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~-~~~~~~~~~~~~~~---~~~~~~~i 294 (470)
+++ ..+ ++++++|++ -|++.+ +++|+++|+++ +..|++||+|+. +.|. ..+.+...+ ......++
T Consensus 160 l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~ 233 (417)
T PF01276_consen 160 LKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKH-GIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGII 233 (417)
T ss_dssp HHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCT-ECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEE
T ss_pred HHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhccc-CCEEEEEccccccccCC-CCccchhhccCcccccccee
Confidence 853 344 489999987 689999 89999999999 999999999885 3343 212222212 12235779
Q ss_pred EEeccCcccccccce-eeEEEcCHH---HHHHHHHHhhhc-cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 012124 295 TVNGFSKAFAMTGWR-LGYIAGPKH---FVAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 369 (470)
Q Consensus 295 ~i~S~sK~~~~~G~r-~G~~~~~~~---~~~~l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (470)
++.|.+|++ +++. .+++....+ -.++++...... +.+|+.+....+..+...- ....-+++.+...++.+.
T Consensus 234 vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m--~~~~G~~l~~~~i~~a~~ 309 (417)
T PF01276_consen 234 VVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQM--EEEEGRELLEEAIELAEE 309 (417)
T ss_dssp EEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHH
T ss_pred eeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH--hhhhhHHHHHHHHHHHHH
Confidence 999999998 4454 345554443 234555433333 3334444333332222210 012223344444445555
Q ss_pred HHHHh---ccCCCCeecCC
Q 012124 370 LVKSF---GELEGVKMSEP 385 (470)
Q Consensus 370 l~~~L---~~~~g~~~~~~ 385 (470)
+++.+ +++.++++..|
T Consensus 310 ~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 310 FRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp HHHHHHHHCCT-SSEESS-
T ss_pred HHHHHHhcCCCceEecCCc
Confidence 55555 55656655433
No 352
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.56 E-value=5.7e-15 Score=138.81 Aligned_cols=245 Identities=20% Similarity=0.225 Sum_probs=157.8
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012124 108 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 187 (470)
Q Consensus 108 ~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~ 187 (470)
+.+++.+++.++.. +...|+......+|.+.+++.+ | .+..+++.+++.+..++++++++|++.|++.+++
T Consensus 7 ~~~~m~~a~~~a~~-gd~~Yg~D~~~~~l~~~i~~l~----g----~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~a 77 (290)
T PF01212_consen 7 PTPAMLEAMAAANV-GDDAYGEDPTTARLEERIAELF----G----KEAALFVPSGTMANQLALRAHLRPGESVICADTA 77 (290)
T ss_dssp S-HHEEHHHHHTTS-B-CCTTSSHHHHHHHHHHHHHH----T----SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTE
T ss_pred CCHHHHHHHHcccc-CCcccCCChhHHHHHHHHHHHc----C----CCEEEEeCCCChHHHHHHHHHHhcCCceeccccc
Confidence 56778888844433 3346988777778888888775 3 3456788899999999999999999999999987
Q ss_pred CCChH---HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC------CceEEEEcCCCCC-cccCCCHHHHHHHHHHHH
Q 012124 188 WVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNP-TGSVYPKNLLDEIARIVA 257 (470)
Q Consensus 188 y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~i~l~~p~nP-tG~~~s~~~~~~l~~~~~ 257 (470)
|.... ......|+++++++...+ ..+|++.|++.+.. ++++|++.+++|. .|.++|.+++++|.++|+
T Consensus 78 Hi~~~E~ga~~~~~G~~~~~l~~~~~--G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~ 155 (290)
T PF01212_consen 78 HIHFDETGAIEELSGAKLIPLPSDDD--GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAR 155 (290)
T ss_dssp HHHHSSTTHHHHHTTCEEEEEBECTG--TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHH
T ss_pred eeeeeccchhhHhcCcEEEECCCccc--CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHH
Confidence 65322 234679999999997532 45999999999953 5789999999885 489999999999999999
Q ss_pred hCCCEEEEEecccc--ccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCC
Q 012124 258 KHPRLLVLSDEIYE--HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 335 (470)
Q Consensus 258 ~~~~~~iI~Dd~~~--~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~ 335 (470)
+| |+.++.|.+=- ...+.+ .++..+.. .-.++.-|++|.+++++ -+.+++++++++.....+........
T Consensus 156 ~~-gl~lhmDGARl~~a~~~~~---~~~~e~~~--~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~ 227 (290)
T PF01212_consen 156 EH-GLPLHMDGARLANAAAALG---VSLAEIAA--GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMR 227 (290)
T ss_dssp HH-T-EEEEEETTHHHHHCHHH---HHHHHHHT--TSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHH
T ss_pred hC-ceEEEEehhhHHHhhhccc---ccHHHHhh--hCCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCee
Confidence 99 99999998721 111111 12222221 22255567999987655 36677899877665444333321111
Q ss_pred ---hHHH-----HHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC
Q 012124 336 ---SISQ-----KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 378 (470)
Q Consensus 336 ---~~~q-----~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 378 (470)
.+.. .++...+ +.+.. ...+..++.+.+.+.|+.++
T Consensus 228 ~~G~~~a~~~~~~~~l~~l------~~~~~-~~~~~~~~A~~La~~l~~~~ 271 (290)
T PF01212_consen 228 QAGVLAAAELYQFAALRAL------ELWLE-RARHANAMAKRLAAGLEALG 271 (290)
T ss_dssp HTTHHHHHHHHHHHHHCHE------ECSHH-HHHCHHHHHHCHHHCHHEEC
T ss_pred ecceeeeechhhHHHHHHH------HhhHH-HHHHHHHHHHHHHHHHHHCC
Confidence 1111 1112222 22333 33444556777888888773
No 353
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=99.56 E-value=1.4e-16 Score=126.49 Aligned_cols=54 Identities=9% Similarity=-0.064 Sum_probs=51.6
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
-.|.+|+|+||+||||.|+||..++||++| ||++|+.+|+|+++.| +|+||+.+
T Consensus 22 ~~I~~g~l~pGdkLPSvRelA~~~~VNpnTv~raY~eLE~eG~i~t~rg-~G~fV~~~ 78 (125)
T COG1725 22 EQIASGELKPGDKLPSVRELAKDLGVNPNTVQRAYQELEREGIVETKRG-KGTFVTED 78 (125)
T ss_pred HHHHhCCcCCCCCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEecC-eeEEEcCC
Confidence 468899999999999999999999999999 9999999999999999 99999875
No 354
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=3.1e-13 Score=127.55 Aligned_cols=297 Identities=19% Similarity=0.209 Sum_probs=200.8
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCC
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS 210 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 210 (470)
.|..++.+.+.+.+++..| .++.+++..| -......+.+|+.||.-|+-+.-.+.+...-++..|+.++....+
T Consensus 178 ~G~~~~hkelE~l~A~f~g---~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-- 251 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLG---VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-- 251 (519)
T ss_pred cccHHHHHHHHHHHHHhcC---CcceEEEecc-ccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC--
Confidence 4666666666666665556 4567777776 334455677889999999999999999999999999999888753
Q ss_pred CCCccCHHhHhhhccC-------C-----ceEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccC-
Q 012124 211 ENFLLDPKVLESKLTE-------K-----SRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA- 276 (470)
Q Consensus 211 ~~~~~d~~~l~~~l~~-------~-----~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~- 276 (470)
|...||+.+++ + -+.+++ -..-..-|.+.. +.+++++++++ ..+++.||+++....+
T Consensus 252 -----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkky-kayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 252 -----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKY-KAYLYLDEAHSIGAMGA 322 (519)
T ss_pred -----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccc-cEEEEeeccccccccCC
Confidence 56666665532 1 123333 333446677766 88999999999 9999999999864442
Q ss_pred -CCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhh---hccCCCChHHHHHHHHHH-hcCCC
Q 012124 277 -PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---QFTSGASSISQKAGVAAL-GLGYA 351 (470)
Q Consensus 277 -~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~---~~~~~~~~~~q~a~~~~l-~~~~~ 351 (470)
+....-+...++ .+..|.+++|.|++|..| ||+.+++++++.++.... ..+..++++.|+...... -.|..
T Consensus 323 tGrgvce~~g~d~-~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~d 398 (519)
T KOG1357|consen 323 TGRGVCEYFGVDP-EDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGED 398 (519)
T ss_pred CCcceeeccCCCc-hhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCC
Confidence 222233333444 577899999999998677 999999999998764322 223345566666544332 23333
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEE--EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012124 352 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 429 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p 429 (470)
+....++..++++++..+++..|.+. |+.+........ +.+..|. ....+.++|+++ +|.+.-
T Consensus 399 gt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~-------------k~~~f~r~~l~~-nigvVv 463 (519)
T KOG1357|consen 399 GTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA-------------KIVAFSREMLER-NIGVVV 463 (519)
T ss_pred cccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc-------------cccHHHHHHHhc-CceEEE
Confidence 35667778888899999999999887 777776655532 2223332 455777778776 555443
Q ss_pred CCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 430 GDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 430 g~~f~~---~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
+..-.. ....|++.+. +.|+++.+++.+.++-
T Consensus 464 vgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 464 VGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred EeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 332221 3578888775 8889999888877653
No 355
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.55 E-value=4.7e-12 Score=128.52 Aligned_cols=328 Identities=13% Similarity=0.120 Sum_probs=202.2
Q ss_pred HHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCC---------CC--CcEEEecChHHHHHHHHHHhc----C----
Q 012124 116 GINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSY---------TP--DQILVSNGAKQSILQAVLAVC----S---- 176 (470)
Q Consensus 116 ~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~---------~~--~~i~it~g~~~al~~~~~~l~----~---- 176 (470)
+...+......|...+...++.+.+.+|+.+..+..- .+ ..=++|+|++++...++.+.. .
T Consensus 110 l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~ 189 (522)
T TIGR03799 110 LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD 189 (522)
T ss_pred HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc
Confidence 5555655566676777888999999999988764210 11 234678899988877665421 1
Q ss_pred ------------------CCCeEEEcCCCCCChHHHHHHcCC---EEEEecCcCCCCCccCHHhHhhhcc----CCceEE
Q 012124 177 ------------------PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLT----EKSRLL 231 (470)
Q Consensus 177 ------------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~i 231 (470)
++..|++.+-.|.+....++.+|. +++.+|++. ++.+|++.|+++++ ++++.+
T Consensus 190 ~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~ 267 (522)
T TIGR03799 190 FKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPL 267 (522)
T ss_pred ccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcE
Confidence 234688888999999999999998 789999974 45699999999885 355555
Q ss_pred EE--cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccc-cCCCCCceEEEeccCcccccccc
Q 012124 232 IL--CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 232 ~l--~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~-~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
++ +..++.||.+-| +++|+++|+++ |+|+++|.+|+....-. +.... +.+...-..+..+.+|.+. ...
T Consensus 268 ~vvataGtt~tGaiDp---l~eIa~i~~~~-g~~lHVDaA~gg~~~~~---~~~r~~l~gle~aDSit~d~HK~l~-~P~ 339 (522)
T TIGR03799 268 AIVGVAGTTETGNIDP---LDEMADIAQEL-GCHFHVDAAWGGATLLS---NTYRHLLKGIERADSVTIDAHKQLY-VPM 339 (522)
T ss_pred EEEEEecCcCCCCcCC---HHHHHHHHHHc-CCeEEEEchhhhHHHhC---HHHHHHhcCchhCCEEEEChhhcCC-cCc
Confidence 44 345679999999 88999999999 99999999998633211 11111 1211133467788999764 446
Q ss_pred eeeEEEcC-HHHHHHHHHHhhh-----------ccC-CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012124 309 RLGYIAGP-KHFVAACNKIQSQ-----------FTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 375 (470)
Q Consensus 309 r~G~~~~~-~~~~~~l~~~~~~-----------~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 375 (470)
.+|+++.. +++.+.+.....+ ..+ ++-+.....+...|+. ++...++++.++..+..+++.+.|+
T Consensus 340 g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~--lG~~G~~~ii~~~~~la~~l~~~L~ 417 (522)
T TIGR03799 340 GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHI--IGRKGYELLIDQSIEKAKYFADLIQ 417 (522)
T ss_pred ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68988775 4454443321000 011 1111112223333332 1256678888888999999999999
Q ss_pred cCCCCeecCC-CceEEEeeec-cCccCCcc-----cCCCC-CC----CHHHHHHHHHHcCCEEEECC----CCCCCC--C
Q 012124 376 ELEGVKMSEP-QGAFYLFIDF-STYYGSEA-----EGFGK-IE----NSESLCRYLLDKAQVALVPG----DAFGDD--T 437 (470)
Q Consensus 376 ~~~g~~~~~~-~~g~~~~~~~-~~~~~~~~-----~~~~~-~~----~~~~l~~~L~~~~gI~v~pg----~~f~~~--~ 437 (470)
+.|++++..+ .-++ +.+++ |....... +.... .. -...+.+++.++..+.+.+- ..+... -
T Consensus 418 ~~~~~el~~~p~l~i-v~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~ 496 (522)
T TIGR03799 418 QQPDFELVTEPELCL-LTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTV 496 (522)
T ss_pred hCCCeEEecCCCccE-EEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcE
Confidence 9989987654 4455 44443 43211000 00000 00 01345555555544444421 112111 3
Q ss_pred cEEEEeec---CHHHHHHHHHH
Q 012124 438 CIRISYAA---SLTTLQAAVER 456 (470)
Q Consensus 438 ~iRls~~~---~~~~i~~~l~~ 456 (470)
.||++++. ++++++..++.
T Consensus 497 ~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 497 VFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEecCCCCCHHHHHHHHHH
Confidence 69999986 77888887664
No 356
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.55 E-value=8.7e-12 Score=120.59 Aligned_cols=333 Identities=15% Similarity=0.143 Sum_probs=210.6
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 175 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~ 175 (470)
+|||-+..-.-.+.+..++++.. +.-.|+.++....|.+.+++.+ | .+.++.|..+..+-.+++..++
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~----GDD~Y~gdpSv~~Lee~vael~----G----~E~alpthqGRgaE~Il~~~~~ 110 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIF----G----YQYTIPTHQGRGAEQIYIPVLI 110 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHc----CCcccccCchHHHHHHHHHHHh----C----CceEEECCCCchHHHHHHHhhc
Confidence 56666655554456777777775 5667988888899999999986 3 3467888878888888889998
Q ss_pred C-CCCeEEEcCC-------C-CCChHHHHHHcCCEEEEecCc--------CCCCCccCHHhHhhhccC----CceEEEEc
Q 012124 176 S-PGDEVIIPAP-------F-WVSYPEMARIADATPVILPTR--------ISENFLLDPKVLESKLTE----KSRLLILC 234 (470)
Q Consensus 176 ~-~gd~Vlv~~p-------~-y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~~l~~----~~~~i~l~ 234 (470)
+ |||++.++.+ . |......+...|+.++.++.+ ......+|++.|++++++ ++-.+...
T Consensus 111 ~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~t 190 (467)
T TIGR02617 111 KKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVAT 190 (467)
T ss_pred ccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeee
Confidence 8 7888886554 1 222234677899998876532 112245899999999974 22333222
Q ss_pred CCCC-CcccCCCHHHHHHHHHHHHhCCCEEEEEeccc-c---cc------ccCCCCccccccc----CCCCCceEEEecc
Q 012124 235 SPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-E---HI------IYAPATHTSFASL----PGMWERTLTVNGF 299 (470)
Q Consensus 235 ~p~n-PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~-~---~~------~~~~~~~~~~~~~----~~~~~~~i~i~S~ 299 (470)
-.+| -.|+++|.+.++++.++|++| |+.++.|.+= . .| .+.+ .++..+ .. .-..+.-|+
T Consensus 191 lt~N~~GGqpvslenlr~V~~la~~~-GIplhLDgARl~nNA~fIk~rE~~a~~---~si~eI~rE~~~--~aDsvt~sl 264 (467)
T TIGR02617 191 ITCNSAGGQPVSLANLKAVYEIAKKY-DIPVVMDSARFAENAYFIKQREAEYKN---WSIEQITRETYK--YADMLAMSA 264 (467)
T ss_pred EEEecCCCEEeCHHHHHHHHHHHHHc-CCcEEEEhHHHHHHhhhhhhcchhhcC---CCHHHHHHHhhc--cCCEEEEEc
Confidence 1234 468899999999999999999 9999999751 1 11 1222 233222 11 112456679
Q ss_pred Ccccccc-cceeeEEEcCHH-HHHHHHHHhh-------hc-cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Q 012124 300 SKAFAMT-GWRLGYIAGPKH-FVAACNKIQS-------QF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 369 (470)
Q Consensus 300 sK~~~~~-G~r~G~~~~~~~-~~~~l~~~~~-------~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (470)
||.++.| | |+++++++ +.+.+.+.+. .. ..+.+.-...+++.-|..+.. +++++.... ..++
T Consensus 265 sKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~-~~yl~~ri~----qv~y 336 (467)
T TIGR02617 265 KKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN-LDWLAYRIN----QVQY 336 (467)
T ss_pred CCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc-HHHHHHHHH----HHHH
Confidence 9998755 3 56666554 3333333221 11 123444455555555655422 455554443 4456
Q ss_pred HHHHhccCCCCeecCCCceEEEeeec----cCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCC-CC--------
Q 012124 370 LVKSFGELEGVKMSEPQGAFYLFIDF----STYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAF-GD-------- 435 (470)
Q Consensus 370 l~~~L~~~~g~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p-g~~f-~~-------- 435 (470)
|.+.|.+. |+.+.. .||.-++++. |+... .. -....++..|..+.||--.- |+.. +.
T Consensus 337 l~~~L~~~-Gvpi~~-~Gghav~iDa~~~lphip~---~~----fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~ 407 (467)
T TIGR02617 337 LVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLPHIPA---DQ----FPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQL 407 (467)
T ss_pred HHHHHHhC-CCcEEe-cCccEEEEehhhhCCCCCh---hh----CcHHHHHHHHHHHcCcceEeecceecccCCCCCccC
Confidence 66777666 888877 7777777653 33211 11 15678888888788885332 3221 11
Q ss_pred ---CCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012124 436 ---DTCIRISYAA---SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 436 ---~~~iRls~~~---~~~~i~~~l~~l~~~l~~ 463 (470)
-.-+||++.. +.+.++-..+++..+.++
T Consensus 408 ~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 408 PCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1369999986 888999999999888764
No 357
>PLN02452 phosphoserine transaminase
Probab=99.54 E-value=1.1e-11 Score=120.73 Aligned_cols=326 Identities=13% Similarity=0.142 Sum_probs=211.9
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcC------CCCC-CCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREG------FTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~------~~~y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
.+.|+.|- ...|+.+++++.+.+.+. .... .-..-..++-+.+.+.+++.++++-+-+-++++.|++.+++
T Consensus 8 ~~~f~pGP--~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 8 VFNFSAGP--ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA 85 (365)
T ss_pred eEeeeCCC--CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence 45565443 235888888888765331 1111 12334457777778888888886433344667799999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCcCCCC--CccCHHhHhhhccCCceEEEEcCCCCCcccCC
Q 012124 169 QAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISEN--FLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244 (470)
Q Consensus 169 ~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~--~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~ 244 (470)
.+...|+.+||++++..-++++-. +.++.+|...+..... +++ ..++++.++. .++.+.+.+++..-.||+.+
T Consensus 86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~v~~~hnETstGv~~ 162 (365)
T PLN02452 86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGK-DEKYTKIPSVSEWEL--TPDAKFVHICANETIHGVEF 162 (365)
T ss_pred HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecC-CCCCCCCCChHHcCC--CCCCcEEEECCCCCCCcEec
Confidence 999999999999998887776644 5677787644333211 122 1356666532 34567777777777899964
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 324 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~ 324 (470)
.+ ++++. ++++|+|.+.+.. ..+..+..+ + + .+.|..|.+|.+| +|++++++++++++.
T Consensus 163 ~~--~~~i~-------~~~lvVDa~Ss~g----~~pidv~~~----~-v-~~~saqK~lGP~G--l~~v~vr~~~l~~~~ 221 (365)
T PLN02452 163 KD--YPDVG-------NVPLVADMSSNFL----SKPVDVSKY----G-V-IYAGAQKNVGPSG--VTIVIIRKDLIGNAR 221 (365)
T ss_pred Cc--ccccC-------CCeEEEECCcccc----CcccCHHHc----C-E-EEEecccccCCCC--eEEEEEcHHHHhhcc
Confidence 31 32321 4788999988752 222333322 2 2 3468999999777 799999998876643
Q ss_pred HH-------h-----hhccCCCChHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHHHHHHhccCCCC-ee-cCC--Cc
Q 012124 325 KI-------Q-----SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGV-KM-SEP--QG 387 (470)
Q Consensus 325 ~~-------~-----~~~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~-~~-~~~--~~ 387 (470)
.. + .....+++....+++..+|+.-. ++ .++.+.++++++.+++++.|++.+|+ .. ..+ .+
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~--~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs 299 (365)
T PLN02452 222 PITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLL--AQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRS 299 (365)
T ss_pred cCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHH--HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhC
Confidence 21 0 01113566667777777776411 22 48889999999999999999987676 11 111 34
Q ss_pred eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 388 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
.+.+.+.+++. ....+|.+.+.++ |+...+|..- -+.+|+|+-. +.++++.+++-++++-++
T Consensus 300 ~~~vsF~~~~~-----------~~~~~f~~~~~~~-g~~~~~G~r~--~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 300 LMNVPFTLGGS-----------ELEAEFVKEAAKA-GMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred CeEEEEEcCCc-----------hhHHHHHHHHHHC-CCcccCCccc--cCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 55666777653 1567788877554 9999998753 2349999876 889999988888887654
No 358
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.54 E-value=4.7e-12 Score=117.75 Aligned_cols=342 Identities=14% Similarity=0.130 Sum_probs=214.1
Q ss_pred hcCCCeEEccCCCCCCCC---hHHHHHHHHHHHHc---CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChH
Q 012124 91 QAGVSVIRLAAGEPDFDT---PVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 164 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~~~~---~~~~~~a~~~~~~~---~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~ 164 (470)
++|+.++|+-.|...... +|++.+++.+++.. ....|.. .-..+|-+++++.+- -+-..++++|+++
T Consensus 47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~P------~~l~~vfF~nsGs 119 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKLP------GDLKVVFFVNSGS 119 (442)
T ss_pred CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhCC------CCceEEEEecCCc
Confidence 467778888888754332 78889999888854 2344532 334566666666542 2335689999999
Q ss_pred HHHHHHHHHhc---CCCCeEEEcCCCCCChHHH-HHHcCCEEEEecCcCC--------------CCCccC---------H
Q 012124 165 QSILQAVLAVC---SPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRIS--------------ENFLLD---------P 217 (470)
Q Consensus 165 ~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~v~~~~~--------------~~~~~d---------~ 217 (470)
+|.+++++... +.-| ++--.-+|++.... +...|.....-+.... +-|+=+ .
T Consensus 120 EANelal~mar~Yt~~~d-iIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a 198 (442)
T KOG1404|consen 120 EANELALKMARLYTGNLD-IIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA 198 (442)
T ss_pred hHHHHHHHHHHHhcCCce-EEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence 99998887642 3334 44446677665433 3333333322222100 000001 1
Q ss_pred HhHhhhcc---C-CceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCc
Q 012124 218 KVLESKLT---E-KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 292 (470)
Q Consensus 218 ~~l~~~l~---~-~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (470)
+++++.+. + .+.+++..+.+--.|+ .+++..+++..+.|+++ |.+.|.||+...|...| .++.+.. ++.
T Consensus 199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~-Ggl~IaDEVqtGfGRtG----~~wgfe~-h~v 272 (442)
T KOG1404|consen 199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR-GGLFIADEVQTGFGRTG----HMWGFES-HGV 272 (442)
T ss_pred HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc-CCEEEehhhhhcccccc----ccccccc-cCC
Confidence 34444441 2 3444455555666675 67888999999999999 99999999999865443 5666654 355
Q ss_pred eEEEeccCcccccccceeeEEEcCHHHHHHHHHHh-hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH
Q 012124 293 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 371 (470)
Q Consensus 293 ~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 371 (470)
+=-|-|++|.+| .|+++|.++..+++.+-+.+.. ...+++.+++...++.+.|+-- ..+++.+..++.-.+|.
T Consensus 273 ~PDIvTmAKgiG-nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vi-----kee~LqE~aa~vG~yl~ 346 (442)
T KOG1404|consen 273 VPDIVTMAKGIG-NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVI-----KEENLQENAAEVGSYLL 346 (442)
T ss_pred CccHHHHHhhcc-CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHH-----HHHhHHHHHHHHHHHHH
Confidence 556889999999 9999999999999999988765 6778889999988888887631 12333444444555566
Q ss_pred HHhccCC-CCeec--CCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012124 372 KSFGELE-GVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 446 (470)
Q Consensus 372 ~~L~~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~ 446 (470)
+.|.++. +..++ ...-|+++-+++-+... ++..-.+ .....+.+.++ +.|+.+--|..++. .+||+... +
T Consensus 347 ~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~-~~~pp~~-~~~~~i~~~ck-e~Gvlvg~g~i~G~--vfriaPPlciT 421 (442)
T KOG1404|consen 347 EKLAALKDKHPIIGDVRGRGLMLGVELVSDKS-EPKPPAT-AEGAVIGEQCK-ELGVLVGKGGIHGN--VFRIAPPLCIT 421 (442)
T ss_pred HHHHHHhhcCCceeecccceeEEEEEEecccC-CCCCcch-HHHHHHHHHHH-HhCeeeecccccce--EEEecCCeecc
Confidence 6665541 22222 22447777777644310 0000000 02345556665 45999977776654 99998654 8
Q ss_pred HHHHHHHHHHH
Q 012124 447 LTTLQAAVERI 457 (470)
Q Consensus 447 ~~~i~~~l~~l 457 (470)
.+|++-+++..
T Consensus 422 ~edi~f~~~~~ 432 (442)
T KOG1404|consen 422 KEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHHH
Confidence 89986666644
No 359
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.53 E-value=1.3e-11 Score=130.76 Aligned_cols=347 Identities=14% Similarity=0.090 Sum_probs=204.0
Q ss_pred CeEEccCCC--CCCC--ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHH
Q 012124 95 SVIRLAAGE--PDFD--TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 170 (470)
Q Consensus 95 ~~i~l~~g~--~~~~--~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~ 170 (470)
.++|+..+- ..+. .++++.+++.+++.+-.+.. ...-..+-...+++.|.+..+.+ ..+++++++++++|++.+
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~-~~~~~hepa~~LAe~L~~~~~~~-~l~rVffs~sGSeAvE~A 443 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVM-FPENVHEPALRAAELLLGGPGKG-WASRVFFSDNGSTAIEVA 443 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccc-cCccCCHHHHHHHHHHHhccCCC-CCCEEEECCchHHHHHHH
Confidence 466666553 2233 37889999999987632211 11223456666777776422100 136899999999999998
Q ss_pred HHHhcC---------------------CCCeEEEcCCCCCChHHHHHHcCCE---------E------EEecCcC----C
Q 012124 171 VLAVCS---------------------PGDEVIIPAPFWVSYPEMARIADAT---------P------VILPTRI----S 210 (470)
Q Consensus 171 ~~~l~~---------------------~gd~Vlv~~p~y~~~~~~~~~~g~~---------~------~~v~~~~----~ 210 (470)
++...+ ...+|+...-+|++....+-..+.. . ..++... .
T Consensus 444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~ 523 (817)
T PLN02974 444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN 523 (817)
T ss_pred HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence 885421 1246888889998855433322210 0 0011000 0
Q ss_pred --------CC-----------Cc-----cC------------HHhHhhhcc--------CCceEEEEcC-CCCCcccC-C
Q 012124 211 --------EN-----------FL-----LD------------PKVLESKLT--------EKSRLLILCS-PSNPTGSV-Y 244 (470)
Q Consensus 211 --------~~-----------~~-----~d------------~~~l~~~l~--------~~~~~i~l~~-p~nPtG~~-~ 244 (470)
.+ |. .| .+.+++.+. +++.++++.. .+.-.|+. .
T Consensus 524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~ 603 (817)
T PLN02974 524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI 603 (817)
T ss_pred ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence 00 00 00 144555553 2455666644 36767875 5
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCCceEEEeccCccccccc-ceeeEEEcCHHHHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAA 322 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~S~sK~~~~~G-~r~G~~~~~~~~~~~ 322 (470)
+++.+++|.++|++| |+++|.||++..|...|... .......++ |-+++|.++ .| +++|.+++.+++.+.
T Consensus 604 ~~~yl~~lr~lc~~~-gilLI~DEV~TGfGRtG~~fa~e~~gv~PD------Ii~~gKgLt-gG~~Plaa~l~~~~I~~~ 675 (817)
T PLN02974 604 DPLFQRALVQVCRSR-KIPVIFDEVFTGLWRLGVESAWELLGCKPD------IACYAKLLT-GGLVPLAATLATEEVFEA 675 (817)
T ss_pred CHHHHHHHHHHHHHh-CCEEEEeecccCCCcccchhhHHhcCCCCC------EEeeccccc-CCCCccEEEEEcHHHHHh
Confidence 789999999999999 99999999999874433211 111122222 555889998 89 699999999999998
Q ss_pred HHH------HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHH----HHhccCCCCeecCCCceEEEe
Q 012124 323 CNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV----KSFGELEGVKMSEPQGAFYLF 392 (470)
Q Consensus 323 l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----~~L~~~~g~~~~~~~~g~~~~ 392 (470)
+.. +....+++.++++..++.+.|+.-.. ++....+.+.-++..+.+. +.|.+.|.+.-.. .-|+++.
T Consensus 676 f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~-~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~ 753 (817)
T PLN02974 676 FRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKD-PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV-SLGTVLA 753 (817)
T ss_pred hccccccCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEE
Confidence 852 12345788999999999888764211 2222233333333333333 3344444332222 3366677
Q ss_pred eeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012124 393 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 461 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l 461 (470)
+++.+.... .+. ...-...+.+.++.+.||.++|. .+.+++.... +++++++.+++|.+.+
T Consensus 754 iel~~~~~~--~~~-~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 754 LELDAEGSG--SGY-SSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEecCCcc--ccc-chHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 777432100 000 00013456677762459999884 2578876544 8999999999998765
No 360
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.53 E-value=1.2e-11 Score=120.07 Aligned_cols=354 Identities=13% Similarity=0.058 Sum_probs=206.0
Q ss_pred cCCCeEEccCCCC--CCCC-hHHHHHHHHHHHHcCCCCCC-CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHH
Q 012124 92 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 167 (470)
Q Consensus 92 ~~~~~i~l~~g~~--~~~~-~~~~~~a~~~~~~~~~~~y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al 167 (470)
+|+.++|-.+|-. ...- .+++.+++.+++.+-.+.+. ...+.+ -..+|+.|.+..+- -+-++|++++|+++++
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P--a~~LA~~L~~~aP~-~~l~~vFf~~sGSeAv 118 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP--AIELAEKLAELAPE-GGLDHVFFTDSGSEAV 118 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch--HHHHHHHHHHhCCC-CCccEEEEeCCchHHH
Confidence 5666777666642 2222 68899999999876221110 111222 34444444432221 1247999999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHH-cC-------------CEEEEecCcCC------CCCc----c
Q 012124 168 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-AD-------------ATPVILPTRIS------ENFL----L 215 (470)
Q Consensus 168 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~~------~~~~----~ 215 (470)
+.+++... +|. .+++.-..+|++-.-..-+ .| ..+..+|.... +.+. -
T Consensus 119 EtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~ 198 (449)
T COG0161 119 ETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAE 198 (449)
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHH
Confidence 99998753 343 3477788888864322111 11 11222222210 1111 1
Q ss_pred CHHhHhhhccC----CceEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccc-cccCC
Q 012124 216 DPKVLESKLTE----KSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF-ASLPG 288 (470)
Q Consensus 216 d~~~l~~~l~~----~~~~i~l~~p-~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~-~~~~~ 288 (470)
..++|++.+.. ++.++++... +--+|+ ++++..++++.++|++| |+++|.||+-..|-..|.....- ..+.+
T Consensus 199 ~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky-~ILlI~DEV~tGFGRTG~~FA~e~~gi~P 277 (449)
T COG0161 199 AADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY-GILLIADEVATGFGRTGKMFACEHAGIVP 277 (449)
T ss_pred HHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc-CcEEEeecceeCCCcCchhhhhhhcCCCC
Confidence 25667777732 4445555333 455786 55777899999999999 99999999998865544321110 11222
Q ss_pred CCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHH-----hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 289 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 289 ~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
+ +-+++|.+...=+++|.+++.+++.+.+..- ....+++.++++..++.+.|+--+. +.++++.++.-
T Consensus 278 D------i~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~-e~l~~~~~~~~ 350 (449)
T COG0161 278 D------ILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE-EDLLERVAEIG 350 (449)
T ss_pred C------eeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 2 5557899964557888899999999888653 3445778899998888887764211 34455544433
Q ss_pred HHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe
Q 012124 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 443 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~ 443 (470)
....+.|.+.|.+.|.+.= ...-|+..-+++....+. ...+ ...-...+...+.++ |+.++|.. +.+=++.
T Consensus 351 ~~l~~~L~~~l~~~p~Vgd-VR~~Gli~~iElv~d~~t-~~~f-~~~~~~~~~~~~~e~-Gl~iRp~g-----~~i~~~P 421 (449)
T COG0161 351 AYLQAGLQAALADHPLVGD-VRGLGLIGAIELVADKAT-KTPF-EARVGARVRAAALER-GLLIRPLG-----DVIYLMP 421 (449)
T ss_pred HHHHHHHHHhcccCCcEEE-eeccceEEEEEEeccccc-ccch-hhhHHHHHHHHHHHC-CeEEeecC-----CEEEEcC
Confidence 3333344433333332211 124467677777543210 0000 000134555555555 99999962 2444443
Q ss_pred ec--CHHHHHHHHHHHHHHHHhhC
Q 012124 444 AA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 444 ~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
.. +++++++.++++++.+++..
T Consensus 422 Pliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 422 PLIITREEIDELVDALREALDETL 445 (449)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHH
Confidence 33 99999999999999998754
No 361
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.52 E-value=1.3e-11 Score=112.23 Aligned_cols=331 Identities=17% Similarity=0.208 Sum_probs=215.5
Q ss_pred hcCCCeEEccCCCCCCCChHHHHHHHHHHH---HcC-CCCCC-CCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHH
Q 012124 91 QAGVSVIRLAAGEPDFDTPVLIAEAGINAI---REG-FTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 165 (470)
Q Consensus 91 ~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~---~~~-~~~y~-~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~ 165 (470)
..+.++|.|..+.....++....+....+. .+. ...+. -.....++-+.+...+....| ..+++++++.+++-
T Consensus 27 ~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiG--A~~~Evvv~dtts~ 104 (407)
T COG3844 27 ALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIG--ARAGEVVVTDTTSI 104 (407)
T ss_pred cCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhc--CCCCceEEeCCcch
Confidence 345578888887766544333333322222 221 11111 123445566667777766556 57789999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcC-CCCCChH----HHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCC
Q 012124 166 SILQAVLAVC--SPGDEVIIPA-PFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN 238 (470)
Q Consensus 166 al~~~~~~l~--~~gd~Vlv~~-p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~n 238 (470)
.++.++.+.+ .+|++|++++ -+|+.-. ..+...|.. +.+ ...+.++.+++++++++.++++++.++
T Consensus 105 nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~----~~~~~P~~~~~~~~dd~AvV~L~~V~y 177 (407)
T COG3844 105 NLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL----EGVIAPRALEEAITDDVAVVLLSHVNY 177 (407)
T ss_pred HHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc----eeeeChHHHHHhhccceEEEEeccccc
Confidence 9998888765 4578888765 4555433 333444432 111 122577899999999999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccc-ccccceeeEEEcCH
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPK 317 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~r~G~~~~~~ 317 (470)
-||..++ +.+|-++++++ +++++-|=+++.. .-+.. +.. .+-.+-|++-.|-+ |-||-..|..+.++
T Consensus 178 ~TGql~d---m~aiT~~AH~~-galv~wDLAHsaG----avp~~---Lh~-~gaDfaigcsyKYLNgGPGapa~l~v~~~ 245 (407)
T COG3844 178 KTGQLLD---MRAITALAHQH-GALVGWDLAHSAG----AVPVD---LHA-AGADFAIGCSYKYLNGGPGAPAGLFVAPR 245 (407)
T ss_pred cccceee---HHHHHHHHHhc-CceEEeehhcccC----Cccee---ecc-cCCCeeeeeeceeccCCCCCceeEEeccc
Confidence 9999999 88999999999 9999999999862 22222 222 45567888888988 23665444444433
Q ss_pred HHHHHH-----------------------HHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHh
Q 012124 318 HFVAAC-----------------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 374 (470)
Q Consensus 318 ~~~~~l-----------------------~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 374 (470)
..+.. ..+.+.....++.++..++...|+-.. +-.+.++|++--...+++.+.+
T Consensus 246 -h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa--~~~i~~lR~kSlaLTd~fieLv 322 (407)
T COG3844 246 -HRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFA--DVDITELRKKSLALTDYFIELV 322 (407)
T ss_pred -cccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhh--hcCHHHHHHhhhHHHHHHHHHH
Confidence 22211 112233333455555555555555421 2236777777777788888887
Q ss_pred ccC-C--CCeecCCCc----eEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--
Q 012124 375 GEL-E--GVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 445 (470)
Q Consensus 375 ~~~-~--g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~-- 445 (470)
+.. + ++++..|.. |-.+-+..| ...++.+.|.++ ||.. .|..++-+|+.|+.
T Consensus 323 Ea~~~~~~l~l~tPr~~~~rGsqvS~~hp--------------~~~~V~qaLi~r-GVig----D~R~P~vlRfgftPlY 383 (407)
T COG3844 323 EARCEYYGLTLVTPRAHEERGSQVSLYHP--------------HGYQVMQALIDR-GVIG----DFREPDVLRFGFTPLY 383 (407)
T ss_pred HhccccCCcEEeccchhhhccceeeEecC--------------cHHHHHHHHHHc-Cccc----cccCCCeeeecCccce
Confidence 753 2 566666643 555666666 467888888876 8853 46778999999986
Q ss_pred -CHHHHHHHHHHHHHHHHhh
Q 012124 446 -SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 446 -~~~~i~~~l~~l~~~l~~~ 464 (470)
+-.++-.+++.|++++++.
T Consensus 384 ~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 384 VSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred echhHHHHHHHHHHHHHHhh
Confidence 7789999999999999864
No 362
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.52 E-value=7.2e-12 Score=129.25 Aligned_cols=169 Identities=11% Similarity=0.169 Sum_probs=118.5
Q ss_pred CCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012124 127 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 206 (470)
Q Consensus 127 y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 206 (470)
...+.|...--+..+.. .|| .....++++|++.++..++.+++.+||.|+++.-||-+..+.+...|+.+++++
T Consensus 190 Ll~~~G~i~eAe~~AA~---~fg---Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~ 263 (714)
T PRK15400 190 LLDHSGPHKEAEEYIAR---VFN---ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFR 263 (714)
T ss_pred CCCCChHHHHHHHHHHH---HhC---CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEec
Confidence 33445544333333333 245 335788999999999999999999999999999999999999999999999997
Q ss_pred CcCCCCCc----cC-----HHhHhhhccC--Cce---EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc
Q 012124 207 TRISENFL----LD-----PKVLESKLTE--KSR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272 (470)
Q Consensus 207 ~~~~~~~~----~d-----~~~l~~~l~~--~~~---~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~ 272 (470)
... +.++ ++ .+.+++++.. +.+ .+++++|++ -|.+++ +++|++.|+.+ + |++||+|+.
T Consensus 264 P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~-~--ilvDEAwga 335 (714)
T PRK15400 264 PTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVK-S--IHFDSAWVP 335 (714)
T ss_pred ccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCC-C--EEEEccchh
Confidence 654 2332 34 7889888854 223 678888855 799999 77888888887 6 688999985
Q ss_pred c-ccCCCC--cccccccCCCCCceEEEeccCcccccccceee
Q 012124 273 I-IYAPAT--HTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 311 (470)
Q Consensus 273 ~-~~~~~~--~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G 311 (470)
. .|...- ..++.......+.++++.|.+|.+ +++.-+
T Consensus 336 h~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQa 375 (714)
T PRK15400 336 YTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQA 375 (714)
T ss_pred hhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHH
Confidence 3 333211 112221111125679999999998 454433
No 363
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.52 E-value=1.5e-11 Score=132.52 Aligned_cols=326 Identities=15% Similarity=0.142 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHhcCCCe-EEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----cCcHHHHHHHHHHHHHHcCCCCC
Q 012124 80 VAITDQATALAQAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYT 153 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~-----~g~~~lr~~ia~~l~~~~g~~~~ 153 (470)
.++.+..+.+.++++.. ..++.|.-+.-.|+.+.+.+.+.- ...+.|+|. +|..+..-.....+.+..| ++
T Consensus 61 ~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~-~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG--~~ 137 (954)
T PRK05367 61 AEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENP-AWYTAYTPYQPEISQGRLEALLNFQTMVADLTG--LE 137 (954)
T ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCc-chhhccCCCChHHHHHHHHHHHHHHHHHHHHHC--CC
Confidence 34555556666555431 234555555445666655444421 114556653 5777666666666766667 46
Q ss_pred CCcEEEecChHHHHHHHHHHh-cCC--CCeEEEcCCCCCChHHHH----HHcCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 154 PDQILVSNGAKQSILQAVLAV-CSP--GDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l-~~~--gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
..|+.+..+++.+.+.++.++ ..+ +|+|++++..||.....+ +..|++++.++.+.+ ++ .+
T Consensus 138 ~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~--------~~ 205 (954)
T PRK05367 138 IANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD--------HD 205 (954)
T ss_pred hhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC--------cc
Confidence 789999999999999888876 345 489999999999887654 568999999987421 11 22
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcc----
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA---- 302 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~---- 302 (470)
++.++++.+| |-+|.+.+ +++|+++|+++ |+++++|.....+... .+ +++.+-.|+++|..|.
T Consensus 206 ~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~-Gal~~vda~~~Al~~l----~~----pge~GaDi~vgs~qkfg~P~ 272 (954)
T PRK05367 206 DVFGVLLQYP-GTSGEVRD---YTALIAAAHAR-GALVAVAADLLALTLL----TP----PGEMGADIAVGSAQRFGVPM 272 (954)
T ss_pred cEEEEEEecC-CCCeeecc---HHHHHHHHHHc-CCEEEEEehhhhccCC----CC----hhhcCCCEEEeeCcccCCCC
Confidence 4444555554 66999998 89999999999 9999998644222111 11 1224556999999987
Q ss_pred -cccccceeeEEEcCHHHHHHHH-H---------------------------HhhhccCCCChHHHHHHHH-HHh-cCCC
Q 012124 303 -FAMTGWRLGYIAGPKHFVAACN-K---------------------------IQSQFTSGASSISQKAGVA-ALG-LGYA 351 (470)
Q Consensus 303 -~~~~G~r~G~~~~~~~~~~~l~-~---------------------------~~~~~~~~~~~~~q~a~~~-~l~-~~~~ 351 (470)
+|-| -.|++.+.+++.+.+. . .+...+.|++.....+.+. ++. .
T Consensus 273 g~GGP--~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~--- 347 (954)
T PRK05367 273 GFGGP--HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYH--- 347 (954)
T ss_pred CCCCC--CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHH---
Confidence 4434 4899999888776652 0 0001111111111111111 111 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC-ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC
Q 012124 352 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 430 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg 430 (470)
+...++++.++...+.+++.+.|++. |+++..+. .+. +.++++. +..++.++|+++ ||.+..
T Consensus 348 g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~~f~~-~~~~~~~-------------~~~~i~~~l~~~-gi~~~~- 410 (954)
T PRK05367 348 GPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDSFFDT-LTVEVGG-------------DAAAVLARALAA-GINLRR- 410 (954)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCCCCe-EEEeCCC-------------CHHHHHHHHHHC-Cceecc-
Confidence 25568888888888999999999774 77764331 122 2233331 678899998766 887732
Q ss_pred CCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 431 DAFGDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 431 ~~f~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
. .++.+|+|+.. ++++|+.+++.|.
T Consensus 411 --~-~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 --V-DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred --c-cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 1 25689999986 8899999999986
No 364
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.51 E-value=1.9e-11 Score=131.16 Aligned_cols=332 Identities=11% Similarity=0.128 Sum_probs=201.4
Q ss_pred HHHHHHHHHHhcCCCeEE-ccCCCCCCCChHHHHHHHHHHHH--cCCCCCCCC--cCcHHHHHHHHHHHHHHcCCCCCCC
Q 012124 81 AITDQATALAQAGVSVIR-LAAGEPDFDTPVLIAEAGINAIR--EGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPD 155 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~i~-l~~g~~~~~~~~~~~~a~~~~~~--~~~~~y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~ 155 (470)
++.+....+...++...+ .+.|.-+.-.|+.+.+++.+... ...+-|.+. +|..+........+.+..| ++++
T Consensus 89 e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG--~~~a 166 (993)
T PLN02414 89 QMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTG--LPMS 166 (993)
T ss_pred HHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhC--CChh
Confidence 444555555555543222 23344444457777677766543 223444432 5655544455555555556 5788
Q ss_pred cEEEecChHHHHHHHHHHh-cCCC--CeEEEcCCCCCChHHHHH----HcCCEEEEecCcCCCCCccCHHhHhhhccCCc
Q 012124 156 QILVSNGAKQSILQAVLAV-CSPG--DEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTEKS 228 (470)
Q Consensus 156 ~i~it~g~~~al~~~~~~l-~~~g--d~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 228 (470)
++.++.+++.+.+.++.++ +.+| |+|++.+..|+.+...++ ..|++++.++.+.. + ...+.+
T Consensus 167 naSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v 235 (993)
T PLN02414 167 NASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDV 235 (993)
T ss_pred hEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCce
Confidence 9999999999999888776 3544 789999999999876654 46999999987421 1 111123
Q ss_pred eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccc---cc
Q 012124 229 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF---AM 305 (470)
Q Consensus 229 ~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~---~~ 305 (470)
..+++..| |-+|.+.+ +++|+++|+++ |+++++ .++.- ... ...+.. ..+-.|++++..|.. |.
T Consensus 236 ~~vlvq~P-~~~G~v~d---v~~I~~~ah~~-GaL~iV-aad~l-al~--~l~~pg----e~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 236 CGVLVQYP-ATDGEVLD---YAEFVKNAHAN-GVKVVM-ATDLL-ALT--MLKPPG----EWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred EEEEEecC-CCCeEEcC---HHHHHHHHHHc-CCEEEE-EECHH-Hhc--CCCCHh----hccCcEEEECCCccccCCCC
Confidence 33433333 34999988 88999999999 999998 43322 111 111122 235568899988876 23
Q ss_pred ccceeeEEEcCHHHHHHHH-HHhh-----------------------hccCCCChHHHHHHHHHHhc---CCCChHHHHH
Q 012124 306 TGWRLGYIAGPKHFVAACN-KIQS-----------------------QFTSGASSISQKAGVAALGL---GYAGGEVVSK 358 (470)
Q Consensus 306 ~G~r~G~~~~~~~~~~~l~-~~~~-----------------------~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~ 358 (470)
.|-+.|++.+.+++.+.+- ++.. .-....+.-...++.+.+.. ...+...+++
T Consensus 303 GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~ 382 (993)
T PLN02414 303 GGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 382 (993)
T ss_pred CCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHH
Confidence 4555899999887765431 0000 00111222122222222211 0002345778
Q ss_pred HHHHHHHHHHHHHHHhccCCCCeecCC-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012124 359 MVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 437 (470)
Q Consensus 359 ~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~ 437 (470)
+.++..++..++.+.|... |+++..+ ..+. +.++++ +..++.++|.++ ||.+..-. ++
T Consensus 383 Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~-vt~~~~--------------~~~~v~~~L~~~-gI~l~~~~----~~ 441 (993)
T PLN02414 383 IAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDT-VKVKCS--------------DADAIADAAAKV-GINLRVVD----AN 441 (993)
T ss_pred HHHHHHHHHHHHHHHHhhc-CCccCCCCCcCe-EEEecC--------------CHHHHHHHHHHC-CCeeEEec----CC
Confidence 8888888999999999775 7766433 1222 223443 457888888766 88665421 46
Q ss_pred cEEEEeec--CHHHHHHHHHHHHH
Q 012124 438 CIRISYAA--SLTTLQAAVERIKK 459 (470)
Q Consensus 438 ~iRls~~~--~~~~i~~~l~~l~~ 459 (470)
.+|+|+.. +++||+.+++.|..
T Consensus 442 ~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 442 TVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred eEEEEeeccCCHHHHHHHHHHHcc
Confidence 79999986 88999999999863
No 365
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=8.2e-12 Score=113.44 Aligned_cols=335 Identities=14% Similarity=0.132 Sum_probs=212.7
Q ss_pred cCCCeEEccCCCCC--CC-ChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGEPD--FD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
.|+.++||-.+... .. .++.+++++.++...-. -....-+..+--..++|+...+|. +.++-++.+.+|.+
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLt--lssrafYnd~~~~f~~~vt~lf~~----~kvlpmnTGaEa~E 130 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLT--LSSRAFYNDVLGEFAEYVTKLFGY----DKVLPMNTGAEAVE 130 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhh--hhhHHHhhhhHHHHHHHHHHhcCc----ceeeecccchhHHH
Confidence 45566777655432 22 37899999999886411 111122345666777777776663 57888888899999
Q ss_pred HHHHHhc------C--CCC--eEEEcCCCCCChHH----------HHHHcCC----EEEEecCcCCCCCccCHHhHhhhc
Q 012124 169 QAVLAVC------S--PGD--EVIIPAPFWVSYPE----------MARIADA----TPVILPTRISENFLLDPKVLESKL 224 (470)
Q Consensus 169 ~~~~~l~------~--~gd--~Vlv~~p~y~~~~~----------~~~~~g~----~~~~v~~~~~~~~~~d~~~l~~~l 224 (470)
.+++... + |.| .|+...-+|++-.. ..+..|- .+..+|. -|.++|+.++
T Consensus 131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l 203 (427)
T KOG1402|consen 131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVAL 203 (427)
T ss_pred HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHh
Confidence 8887643 1 332 33333444443221 1111111 1222232 1889999999
Q ss_pred cC-CceEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcc
Q 012124 225 TE-KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 302 (470)
Q Consensus 225 ~~-~~~~i~l~~p~nPtG~~-~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~ 302 (470)
++ +.+++++...|-..|++ .|+..+++..++|.+| |+++|.||++..+...|.- ...........++. |.|.
T Consensus 204 ~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky-nvl~I~DEvQTGl~RTGk~--la~d~env~PDivi---lgKa 277 (427)
T KOG1402|consen 204 KSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY-NVLLIADEVQTGLARTGKL--LACDYENVRPDIVI---LGKA 277 (427)
T ss_pred cCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh-cEEEEehhhhhcccccCcE--EEeehhhcCCCeEE---Eecc
Confidence 65 45555555558888875 4667899999999999 9999999999987655431 11112221122333 5699
Q ss_pred cccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC----C
Q 012124 303 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----E 378 (470)
Q Consensus 303 ~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~ 378 (470)
++-.=++++.+++.++++..++......+++.++++..++.++|+- -.-+++.++.+..-+.|++.|+++ |
T Consensus 278 lSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalev-----i~eekL~era~~lG~~l~~~L~~l~~~~p 352 (427)
T KOG1402|consen 278 LSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEV-----IVEEKLVERAAKLGEILRDQLNKLQKKFP 352 (427)
T ss_pred ccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8623367899999999999888777788899999999999888873 223455555666667777777765 3
Q ss_pred CCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHH
Q 012124 379 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVER 456 (470)
Q Consensus 379 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~ 456 (470)
++--....-|++..+.+.... .. ..++-+++-.|. +.|++.-|- ..+-||++... ++++++++++.
T Consensus 353 ~~v~~VRGrGl~~ai~i~~~~---~~----~~~aw~~cl~lk-~~g~LAkpt----H~~IiRfaPPL~I~e~dl~eg~e~ 420 (427)
T KOG1402|consen 353 HVVKEVRGRGLLNAIVINPSK---TS----GQDAWDVCLALK-ENGLLAKPT----HGNIIRFAPPLVISEEDLREGIEA 420 (427)
T ss_pred chhheeeccceEEEEEecccc---cc----chhHHHHHHccc-ccccccCCC----CCCeEEecCCcccCHHHHHHHHHH
Confidence 321112234666666653210 01 115667776665 448877663 25689998765 99999999999
Q ss_pred HHHHHH
Q 012124 457 IKKGLL 462 (470)
Q Consensus 457 l~~~l~ 462 (470)
|++.+.
T Consensus 421 i~k~i~ 426 (427)
T KOG1402|consen 421 IEKTIA 426 (427)
T ss_pred HHHHhc
Confidence 988764
No 366
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=2.1e-12 Score=119.92 Aligned_cols=341 Identities=20% Similarity=0.227 Sum_probs=224.5
Q ss_pred cCCCeEEccCCC-CCCCChHHHHHHHHHHHHcC-------CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecCh
Q 012124 92 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 163 (470)
Q Consensus 92 ~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~ 163 (470)
+|+++++|.+.+ ..+...+.+++.+...+++- ..-|+...-...|.+.||+++. .++.|+...|-
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivYs~gF 164 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVYSYGF 164 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeeecccc
Confidence 566788887766 34555778888877777651 2447666667788999999873 45677777776
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCc------------eE-
Q 012124 164 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS------------RL- 230 (470)
Q Consensus 164 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------------~~- 230 (470)
+ ++..++.++.+.||.|.+.+-........++...-.++....+ |.+.++..+.+.+ +-
T Consensus 165 ~-ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358|consen 165 S-TIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred c-hhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccceEE
Confidence 5 4666788999999999999888777888888888787777642 6677766663322 33
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCC--CCcccccccCCCCCceEEEeccCcccccccc
Q 012124 231 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 231 i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~--~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
|++..---+||...+ +.+|+++..+| .+.||.||.|+....+. .+.......+. .+-.++++|+.-+++..|
T Consensus 237 iv~EGl~~N~g~i~p---l~~iv~lk~Ky-k~RvildEs~SfG~lg~~GrGvteH~~v~~-~~iDiv~~sm~~alas~G- 310 (467)
T KOG1358|consen 237 IVVEGLYANTGDICP---LPEIVKLKNKY-KFRVILDESLSFGVLGKTGRGVTEHFGVPI-TDIDIVTASMETALASGG- 310 (467)
T ss_pred EEEEeeccCCCcccc---cHHHHHHHhhh-eEEEEEecccccccccccCccccccCCCCc-cceeeeeecccccccccC-
Confidence 334444557999999 88999999999 99999999999755543 22233333332 466789999999987555
Q ss_pred eeeEEEcCHHH--HHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC
Q 012124 309 RLGYIAGPKHF--VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 386 (470)
Q Consensus 309 r~G~~~~~~~~--~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 386 (470)
||.++..-+ .+++......++-+.++....++..++.- .++-.++.+.++.....+.+.|+...++.+....
T Consensus 311 --gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i----~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~ 384 (467)
T KOG1358|consen 311 --GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI----EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSP 384 (467)
T ss_pred --ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHH----HhhCcchhhhhhccccccchhhhcCCceEEecCc
Confidence 888774322 23333333344455666666666666653 3444445666666666777777776567665443
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC------CCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF------GDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f------~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
-...+.+.+.+..+.... ...--++++++.+.+ ++.+...... -.+..+|+++.. ++++++.+...|+
T Consensus 385 ~SPi~hl~l~~~~~s~e~---e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik 460 (467)
T KOG1358|consen 385 ESPIIHLQLERSYGSREK---EEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIK 460 (467)
T ss_pred CCceeeeeecccccchHH---HHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 333355565442111000 000124556666666 7777654332 124589999987 9999999999998
Q ss_pred HHHHh
Q 012124 459 KGLLT 463 (470)
Q Consensus 459 ~~l~~ 463 (470)
++...
T Consensus 461 ~~~~~ 465 (467)
T KOG1358|consen 461 EVASA 465 (467)
T ss_pred HHHHh
Confidence 87654
No 367
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.50 E-value=5.2e-13 Score=129.59 Aligned_cols=239 Identities=17% Similarity=0.170 Sum_probs=159.3
Q ss_pred cCCCeEEccCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 92 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 92 ~~~~~i~l~~g~--~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
+|+.++|+..|. ..+.. ++.+.+++.+++....... ......+....+++.+.+..+. ..+++++++++++|++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve 90 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEAVE 90 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccc--ccceeeeccCchHHHH
Confidence 567889998774 33333 6899999999887643222 2444567778888888776632 4479999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHc-C------------CEEEEecCcCCCCCccCHHh--------
Q 012124 169 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISENFLLDPKV-------- 219 (470)
Q Consensus 169 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~~~~~~d~~~-------- 219 (470)
.+++... .++ ..|+...-+|++........ + ..+..+|.. ++..
T Consensus 91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~~~ 163 (339)
T PF00202_consen 91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQACL 163 (339)
T ss_dssp HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHHHHH
T ss_pred HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHHHHH
Confidence 9998765 233 78888899999865432221 1 133445542 2222
Q ss_pred --Hhhhc----cCCceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc-ccccccCCCCC
Q 012124 220 --LESKL----TEKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWE 291 (470)
Q Consensus 220 --l~~~l----~~~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~-~~~~~~~~~~~ 291 (470)
+++.+ .+++.+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..+...+... .....+.++
T Consensus 164 ~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tG~gRtG~~~a~~~~gv~PD-- 240 (339)
T PF00202_consen 164 NALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH-GILLIADEVQTGFGRTGKFFASEHYGVDPD-- 240 (339)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT-T-EEEEEETTTTTTTTSSSSGHHHHTSSSS--
T ss_pred HHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccc-ccceecccccccccccCCccceecccccCc--
Confidence 22222 345667777555555564 56788999999999999 99999999999874333211 111223332
Q ss_pred ceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhc
Q 012124 292 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 348 (470)
Q Consensus 292 ~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 348 (470)
+-+|+|.++ .|+.+|.+++++++.+.+.......+++.+++...++.+.|+.
T Consensus 241 ----iv~~gK~l~-gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~ 292 (339)
T PF00202_consen 241 ----IVTFGKGLG-GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEI 292 (339)
T ss_dssp ----EEEEEGGGG-TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHH
T ss_pred ----ccccccchh-hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHh
Confidence 334679998 8899999999999998775555556777889998888888764
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.46 E-value=7.4e-11 Score=113.69 Aligned_cols=324 Identities=11% Similarity=0.046 Sum_probs=205.2
Q ss_pred EEccCCCCCCCChHHHHHHHHHHHHcC------CCCC-CCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHH
Q 012124 97 IRLAAGEPDFDTPVLIAEAGINAIREG------FTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 169 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~~~~~~------~~~y-~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~ 169 (470)
++|+.|-- ..|+++.+++.+.+.+. .... .-..-..++-+.+.+.+++.++++-+.+=++++.|++.++..
T Consensus 6 ~nF~aGPa--~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea 83 (364)
T PRK12462 6 LNFSGGPG--ALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM 83 (364)
T ss_pred ceecCCCc--CCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence 55655532 34788888877766541 1111 122345667777778888888875333334566679999999
Q ss_pred HHHHhcCCCCeEE-EcCCCCCChH--HHHHHcCCEEEEecCcCC--CCCccCHHhHhhhccCCceEEEEcCCCCCcccCC
Q 012124 170 AVLAVCSPGDEVI-IPAPFWVSYP--EMARIADATPVILPTRIS--ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 244 (470)
Q Consensus 170 ~~~~l~~~gd~Vl-v~~p~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~ 244 (470)
+...|+.+||+++ +..-++++-. ..++..| ++..+..... -+..++++.+ .+.++.+.+.+++..-.||+.+
T Consensus 84 ~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~ 160 (364)
T PRK12462 84 IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQF 160 (364)
T ss_pred HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEec
Confidence 9999999999665 5555555433 4556666 4444432111 1233556665 2334567777777667899988
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHH
Q 012124 245 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 324 (470)
Q Consensus 245 s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~ 324 (470)
+ ++.+.+ +.++|+|-+-+.+. .+..+..+ .+++.+.-|.+|.|| ++.++..++.+++..
T Consensus 161 ~--------~~~~~~-~~llvvD~sS~~~s----~pid~~~~------dvi~agsQKnlgP~G--ltvvivs~~al~~~~ 219 (364)
T PRK12462 161 P--------DAAGLP-DSPLIADMSSDFMS----RPFDVEAY------GMVYAHAQKNLGPAG--VTVAIIRRALLERVP 219 (364)
T ss_pred C--------cccccC-CCeEEEEcCchhhC----CCCChHHc------cEEEeeccccCCCCc--eEEEEECHHHHhhcc
Confidence 6 222346 88999998776422 12222222 367777889999666 688888888776543
Q ss_pred HH-----------hhhcc-CCCChHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHHHHHHhccCCCCeec----CCC
Q 012124 325 KI-----------QSQFT-SGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMS----EPQ 386 (470)
Q Consensus 325 ~~-----------~~~~~-~~~~~~~q~a~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~~~~----~~~ 386 (470)
.. ..... ..++.+..+++...|+.- .++ .++.+.++.+++.+.+++.+.+.+|+... ...
T Consensus 220 ~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i--~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~R 297 (364)
T PRK12462 220 DTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWI--RDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAAR 297 (364)
T ss_pred ccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHH--HHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence 21 11112 245666777777776642 133 67888899999999999999988654321 224
Q ss_pred ceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 387 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 387 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
+-+.+.+++++.. ...+|.+.+. +.|+.-.-|. ..-|.+|.|+-. +.+.++.+++-++++-+
T Consensus 298 S~mnv~f~~~~~~-----------l~~~f~~~a~-~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 298 STMNVAFRFRQPR-----------LDTLFKEQST-EAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred CcceEEEEcCCHH-----------HHHHHHHHHH-HCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 4577777776541 4566776654 5588776664 345789999876 87887777777766654
No 369
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.43 E-value=1.7e-10 Score=119.28 Aligned_cols=153 Identities=13% Similarity=0.165 Sum_probs=107.9
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCc----cCH-----HhHhhh
Q 012124 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL----LDP-----KVLESK 223 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~----~d~-----~~l~~~ 223 (470)
.....++++|++.++..++.+++.+||.|+++.-||-+..+.+...|+.+++++... +.++ ++. +.++++
T Consensus 210 Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~ 288 (713)
T PRK15399 210 AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NALGILGGIPRREFTRDSIEEK 288 (713)
T ss_pred CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cccCCcCCCChhhccHHHHHHH
Confidence 345788999999999999999999999999999999999999999999999997553 2232 445 888888
Q ss_pred ccC-----CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc-cccCCCC--cccccccCCCCCceEE
Q 012124 224 LTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPAT--HTSFASLPGMWERTLT 295 (470)
Q Consensus 224 l~~-----~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~-~~~~~~~--~~~~~~~~~~~~~~i~ 295 (470)
+.+ +++++++++|++ -|.+++ +++|++.| . --+|++||+|+. +.|.... ..++....+....++.
T Consensus 289 i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~--g-~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~ 361 (713)
T PRK15399 289 VAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL--D-VPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFE 361 (713)
T ss_pred HHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh--C-CCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeee
Confidence 853 336788888865 799999 66667766 2 225569999985 2333211 1122211122234567
Q ss_pred EeccCcccccccceee-EEEc
Q 012124 296 VNGFSKAFAMTGWRLG-YIAG 315 (470)
Q Consensus 296 i~S~sK~~~~~G~r~G-~~~~ 315 (470)
+.|.+|.+ +++.-+ ++..
T Consensus 362 tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 362 TQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred eeehhccc--cccchheeeee
Confidence 89999998 455544 4444
No 370
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.41 E-value=5.7e-13 Score=112.51 Aligned_cols=82 Identities=22% Similarity=0.438 Sum_probs=69.6
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 012124 104 PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 181 (470)
Q Consensus 104 ~~~~~~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~i~it~g~~~al~~~~~~l~~~gd~V 181 (470)
|++.+|+.+++++.+. ..|++..|.++||+++++|+.+.+| +.+++++|++|+|++++++.++.++++|||.|
T Consensus 70 ~d~~~~~~i~~~~~~~-----a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~V 144 (153)
T PLN02994 70 ADICTAEGTIDSFKDI-----ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAF 144 (153)
T ss_pred cccCCcHHHHHHHHHH-----hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEE
Confidence 3444555555555542 3488999999999999999999988 67889999999999999999999999999999
Q ss_pred EEcCCCCCC
Q 012124 182 IIPAPFWVS 190 (470)
Q Consensus 182 lv~~p~y~~ 190 (470)
++++|+|++
T Consensus 145 lVp~P~Y~~ 153 (153)
T PLN02994 145 LVPTPYYAA 153 (153)
T ss_pred EEeCCCCCC
Confidence 999999974
No 371
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.41 E-value=1.6e-10 Score=114.78 Aligned_cols=223 Identities=19% Similarity=0.173 Sum_probs=144.3
Q ss_pred CCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCC----CccCHHhHhhhccC--
Q 012124 153 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN----FLLDPKVLESKLTE-- 226 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~----~~~d~~~l~~~l~~-- 226 (470)
.....++++|++.++..+..+++.+||.|+++..++-+..+.+-..|+.++++....+.. .+++.+.+++++.+
T Consensus 85 Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~ 164 (557)
T COG1982 85 ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHP 164 (557)
T ss_pred CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhCh
Confidence 335788999999999999999999999999999999999999999999999887654431 34789999887733
Q ss_pred Cc-eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccc
Q 012124 227 KS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 305 (470)
Q Consensus 227 ~~-~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~ 305 (470)
.. |++++++|.+ -|++++ .++|.+++..+ ++|+.+|+++.... +-.+..+ ......+.+++..|.+|.++
T Consensus 165 ~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~-~a~v~~deah~~~~-~~~~~l~--~~~~~~~~~~~tqS~HK~l~- 235 (557)
T COG1982 165 DAEKLAVITNPTY-DGVCYN---LRKIVELLHHY-GAWVLYDEAHPAHF-DFSPMLP--ESALNGGADFVTQSTHKLLA- 235 (557)
T ss_pred hhheeEEEecCcc-ceEeec---HHHHHHHHhhc-CceEEhhhcCcccc-cccccCc--chhhhcCceEEEechhhhhh-
Confidence 44 7778888876 699999 88889999999 99999999987532 1111111 12222578899999999984
Q ss_pred cccee-eEEEcCH--H-HHHHHHHHhhhccCCCChHHHHHHHHHHh--cCCCChHHHHHHHHHHHHHHHHHHHHhccCCC
Q 012124 306 TGWRL-GYIAGPK--H-FVAACNKIQSQFTSGASSISQKAGVAALG--LGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 379 (470)
Q Consensus 306 ~G~r~-G~~~~~~--~-~~~~l~~~~~~~~~~~~~~~q~a~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 379 (470)
++.- .++.... . -.+++.........+.|.....|....-+ .+..+....++..+..-+.|+.+.+..+++++
T Consensus 236 -alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~ 314 (557)
T COG1982 236 -ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGF 314 (557)
T ss_pred -hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4444 3444442 1 12344433333333333333333332211 11111222233344445556666666666655
Q ss_pred CeecCC
Q 012124 380 VKMSEP 385 (470)
Q Consensus 380 ~~~~~~ 385 (470)
+.+..+
T Consensus 315 ~~~~~~ 320 (557)
T COG1982 315 FPVLQP 320 (557)
T ss_pred eeeccc
Confidence 554433
No 372
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.31 E-value=2.8e-10 Score=105.93 Aligned_cols=176 Identities=18% Similarity=0.257 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCCeEEE-cCCCCCChHHHH----------HHcCCE
Q 012124 136 LRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYPEMA----------RIADAT 201 (470)
Q Consensus 136 lr~~ia~~l~~~~g~~~~~~~i~i---t~g~~~al~~~~~~l~~~gd~Vlv-~~p~y~~~~~~~----------~~~g~~ 201 (470)
=|+.+-+-+.+-+|. |.-++ .-++++||.+++..+++|||+.+. ...-|.....++ +.+|.+
T Consensus 55 GRd~le~iyA~vfga----E~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 55 GRDKLERIYADVFGA----EDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp HHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred cHHHHHHHHHHHhCc----hhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence 366666666665653 33333 247899999999999999999985 444566665554 668899
Q ss_pred EEEecCcCCCCCccCHHhHhhhccCCceEEEE-cCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEEeccccccccCCCC
Q 012124 202 PVILPTRISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPAT 279 (470)
Q Consensus 202 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~-~~~~~iI~Dd~~~~~~~~~~~ 279 (470)
...+++.+++. +|+|.+++++++++|++++ =+..+-+=-.++.++++++++++++ +|++++++|++|++|.-. .
T Consensus 131 Y~~v~L~~dg~--~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~--~ 206 (403)
T PF06838_consen 131 YREVPLTEDGT--IDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET--Q 206 (403)
T ss_dssp EEE--B-TTSS--B-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS--S
T ss_pred eEEEeecCCCC--cCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc--c
Confidence 99999986554 9999999999999999998 4446666678899999999999977 358999999999997532 2
Q ss_pred cccccccCCCCCceEEEeccCcccccccce--eeEEEcCHHHHHHHHHH
Q 012124 280 HTSFASLPGMWERTLTVNGFSKAFAMTGWR--LGYIAGPKHFVAACNKI 326 (470)
Q Consensus 280 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r--~G~~~~~~~~~~~l~~~ 326 (470)
.|.- -+-.+..||+-|..| .|+- -||+++.+++++.....
T Consensus 207 EP~~------vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~R 248 (403)
T PF06838_consen 207 EPTE------VGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYR 248 (403)
T ss_dssp -GGG------GT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHH
T ss_pred Cccc------cchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhh
Confidence 2221 244589999999986 5543 48999999999987654
No 373
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.31 E-value=3.3e-09 Score=112.75 Aligned_cols=328 Identities=11% Similarity=0.139 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHhcCCCe-EEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----cCcHHHHHHHHHHHHHHcCCCC
Q 012124 79 TVAITDQATALAQAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSY 152 (470)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~-i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~-----~g~~~lr~~ia~~l~~~~g~~~ 152 (470)
-.++.+....+.+.++.+ ..++.|.-+.-.|+.+.+.+.+.-. ..+.|+|. +|..+..=.++..+.+..|.
T Consensus 48 E~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~-~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm-- 124 (939)
T TIGR00461 48 EYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPG-WYTAYTPYQPEISQGRLEALLNFQTVVSDLTGL-- 124 (939)
T ss_pred HHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCch-hhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCC--
Confidence 345555566666666542 2334555444457777655544211 13556553 57666666666777776775
Q ss_pred CCCcEEEecChHHHHHHHHHHhc---CCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCcCCCCCccCHHhHhhhcc
Q 012124 153 TPDQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 153 ~~~~i~it~g~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
+..|.-+..+++.+.+.++.+.. +++++|+|++-.||.+..+++ ..|.+++.++ ++.|++.+
T Consensus 125 ~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~- 193 (939)
T TIGR00461 125 PVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV- 193 (939)
T ss_pred ChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC-
Confidence 44577788888888887776642 234899999999999886665 6888887764 34465555
Q ss_pred CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccc-
Q 012124 226 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA- 304 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~- 304 (470)
++.++++.+|+. +|.+.+ +++|+++++++ |.+++++---..+. +..-+++.+-.|++++ +|.||
T Consensus 194 -~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~-gal~~~~ad~~al~--------ll~~Pge~GaDi~vg~-~q~fg~ 258 (939)
T TIGR00461 194 -DVFGCLLQYPAT-DGSILD---YKQLIDALHSH-KSLVSVAADLMALT--------LLTPPGHYGADIVLGS-SQRFGV 258 (939)
T ss_pred -CEEEEEEECCCC-CeEEec---HHHHHHHHHHc-CCEEEEEechHHhC--------CcCCHHHcCCcEEeeC-CCccCC
Confidence 466667777765 788765 88999999999 88888743221111 1111122344455553 23333
Q ss_pred ---cccceeeEEEcCHHHHHHH----------------------------HHHhhhccCCCChHHHHHHHH--HHhcCCC
Q 012124 305 ---MTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAGVA--ALGLGYA 351 (470)
Q Consensus 305 ---~~G~r~G~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q~a~~~--~l~~~~~ 351 (470)
..|--.|++.+.+++.+.+ ++.+...++|++.......+. +.-.
T Consensus 259 p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~--- 335 (939)
T TIGR00461 259 PMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH--- 335 (939)
T ss_pred CCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH---
Confidence 2355577777777665543 223333444554443332222 2223
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEE--EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012124 352 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 429 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~p 429 (470)
+.+.++++.++...+..++.+.|.+. |+++..+ .|| +.++++.. +..++.++|+++ ||.+..
T Consensus 336 G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~fF~~~~v~~~~~------------~~~~i~~~~~~~-gi~l~~ 399 (939)
T TIGR00461 336 GPKGLKNIARRIHSLTSILANGLEND-PHELINK--TWFDTLTVKVGNG------------ISSELLKAAEEF-NINLRA 399 (939)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CccceEEEEeCCC------------CHHHHHHHHHHC-CCeeee
Confidence 36778899898888999999999885 8877644 333 23344321 578888888766 888765
Q ss_pred CCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 430 GDAFGDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 430 g~~f~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
. .++.+++|+.- +.++|+..++.+.
T Consensus 400 ~----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 V----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred c----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 2 24689999986 8899999998884
No 374
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.26 E-value=6.4e-10 Score=109.00 Aligned_cols=272 Identities=16% Similarity=0.170 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------C
Q 012124 111 LIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS--------P 177 (470)
Q Consensus 111 ~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~-----~~~i~it~g~~~al~~~~~~l~~--------~ 177 (470)
.+-+.+...+......|...+...++.+.+.+++.+.+|.+.+ ...=++|+|+++++..++.+..+ .
T Consensus 55 i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~ 134 (373)
T PF00282_consen 55 ILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAK 134 (373)
T ss_dssp HHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhc
Confidence 3445566666656666766677889999999999999998621 23567899999998877655321 1
Q ss_pred C-----C-eEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccC---C--ce-EEEEcCCCCCcccCCC
Q 012124 178 G-----D-EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---K--SR-LLILCSPSNPTGSVYP 245 (470)
Q Consensus 178 g-----d-~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~--~~-~i~l~~p~nPtG~~~s 245 (470)
| + .|++.+-+|.+....+..+|+.++.||+++ ++.+|++.|++++.+ + +- +|+.+..+..||.+=+
T Consensus 135 ~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~ 212 (373)
T PF00282_consen 135 GVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP 212 (373)
T ss_dssp TTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S
T ss_pred ccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC
Confidence 2 2 566777789999999999999999999985 456999999998843 2 22 3444666778998866
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccccccccC-CCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH-HHHHH
Q 012124 246 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAAC 323 (470)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~-~~~~l 323 (470)
+++|.++|+++ ++|+.+|.+|+...+- ......+..+. .-.=+.-+++|.++ ....+|+++...+ .+...
T Consensus 213 ---l~~i~~i~~~~-~~wlHVDaA~gg~~~~~~~~~~~~~gi~---~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~ 284 (373)
T PF00282_consen 213 ---LEEIADICEKY-NIWLHVDAAYGGSALLSPEYRHLLFGIE---RADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDA 284 (373)
T ss_dssp ---HHHHHHHHHHC-T-EEEEEETTGGGGGGHCTTGGGGTTGG---GESEEEEETTTTTS--SSS-EEEEESSGGGHHGG
T ss_pred ---HHHHhhhcccc-ceeeeecccccccccccccccccccccc---cccccccchhhhhc-CCccceeEEeecccchHHH
Confidence 88999999999 9999999999983321 11111111121 11223456899997 5678999887653 33221
Q ss_pred H----H-Hh------------hhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC-
Q 012124 324 N----K-IQ------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP- 385 (470)
Q Consensus 324 ~----~-~~------------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~- 385 (470)
. . +. ...+...+. ...++...+..-.++.+.+++..+...+..+++.+.|++.+++++..+
T Consensus 285 ~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~ 363 (373)
T PF00282_consen 285 FSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP 363 (373)
T ss_dssp GEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT
T ss_pred hccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 1 0 00 001223333 223332222211113566777888888899999999999888887654
Q ss_pred CceEEEeee
Q 012124 386 QGAFYLFID 394 (470)
Q Consensus 386 ~~g~~~~~~ 394 (470)
.-+. +.++
T Consensus 364 ~~~~-vcFr 371 (373)
T PF00282_consen 364 DLNI-VCFR 371 (373)
T ss_dssp SSSE-EEEE
T ss_pred CceE-EEEE
Confidence 4444 4444
No 375
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=99.25 E-value=1.3e-13 Score=98.82 Aligned_cols=53 Identities=6% Similarity=-0.101 Sum_probs=46.5
Q ss_pred ccccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 8 STSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 8 ~~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
..+.|.+|.++||++|||.++||+.|+|||+| ||++|+++|+|+.+++ +|+||
T Consensus 9 l~~~I~~g~~~~g~~lps~~~la~~~~vsr~tvr~al~~L~~~g~i~~~~~-~G~~V 64 (64)
T PF00392_consen 9 LRQAILSGRLPPGDRLPSERELAERYGVSRTTVREALRRLEAEGLIERRPG-RGTFV 64 (64)
T ss_dssp HHHHHHTTSS-TTSBE--HHHHHHHHTS-HHHHHHHHHHHHHTTSEEEETT-TEEEE
T ss_pred HHHHHHcCCCCCCCEeCCHHHHHHHhccCCcHHHHHHHHHHHCCcEEEECC-ceEEC
Confidence 34679999999999999999999999999999 9999999999999999 99997
No 376
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.23 E-value=3.8e-09 Score=97.48 Aligned_cols=357 Identities=16% Similarity=0.195 Sum_probs=218.4
Q ss_pred HHHHHhcCCCeEEccCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEe
Q 012124 86 ATALAQAGVSVIRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS 160 (470)
Q Consensus 86 ~~~~~~~~~~~i~l~~g~~~~~~-----~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it 160 (470)
...+...|.+..-|.+.+....+ .-.+.+....++-.+.-.|..+.++..|.+++.+.+ |. +.++.|
T Consensus 29 E~al~~ag~N~F~l~Sedv~IDLLTDSGTgams~~qwaamm~GDEAYagsrs~~~L~~avkdif----Gf----q~~iPt 100 (471)
T COG3033 29 EEALKKAGYNPFLLDSEDVFIDLLTDSGTGAMTDKQWAAMMRGDEAYAGSRSYYALADAVKDIF----GF----QYTIPT 100 (471)
T ss_pred HHHHHHcCCCeeeccccceEEEeeccCCcccccHHHHHHHhccchhhcccccHHHHHHHHHHhc----Cc----eeeeec
Confidence 34455667666666666532111 122333333444456778988999999999999885 43 578888
Q ss_pred cChHHHHHHHHHHhcCCCC-----eEEEcCCCCC-ChHHHHHHcCCEEEEecCcCCCC--------CccCHHhHhhhccC
Q 012124 161 NGAKQSILQAVLAVCSPGD-----EVIIPAPFWV-SYPEMARIADATPVILPTRISEN--------FLLDPKVLESKLTE 226 (470)
Q Consensus 161 ~g~~~al~~~~~~l~~~gd-----~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~--------~~~d~~~l~~~l~~ 226 (470)
.-+..|-+.++..++++|+ +.++++-.|. ......+..|+.++.++++...+ ..+|++.|++.|++
T Consensus 101 hQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lide 180 (471)
T COG3033 101 HQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDE 180 (471)
T ss_pred cCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHH
Confidence 8888887777777776554 3344444444 45556788999888888764221 23799999999964
Q ss_pred ----CceEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEEecc-ccccccC------CCCcccccccCCCC--Cc
Q 012124 227 ----KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI-YEHIIYA------PATHTSFASLPGMW--ER 292 (470)
Q Consensus 227 ----~~~~i~l~~p-~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~-~~~~~~~------~~~~~~~~~~~~~~--~~ 292 (470)
++-.|+++-. |.-.|+..|.+.++++.++|++| ++.++.|.+ |.+-.|- +....++..+..+. =-
T Consensus 181 vG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky-~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYa 259 (471)
T COG3033 181 VGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY-DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYA 259 (471)
T ss_pred hCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc-CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhh
Confidence 5666665444 55789999999999999999999 999999976 3332221 11223333321100 00
Q ss_pred eEEEeccCcccccccceeeEEEcCHH----HHHHHHHHhhhc-----cCCCChHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012124 293 TLTVNGFSKAFAMTGWRLGYIAGPKH----FVAACNKIQSQF-----TSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 363 (470)
Q Consensus 293 ~i~i~S~sK~~~~~G~r~G~~~~~~~----~~~~l~~~~~~~-----~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 363 (470)
.-..-|.-|- |+.-+ -|++...++ +...++...-.. ..+.+.=...+++.-|.++.. .+|++...++
T Consensus 260 D~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~-~~yl~~Rv~Q- 335 (471)
T COG3033 260 DGCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVN-FDYLAHRVAQ- 335 (471)
T ss_pred hhheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcC-cHHHHHHHHH-
Confidence 0122333333 33322 167776654 555554332111 112233334445555555443 5666665544
Q ss_pred HHHHHHHHHHhccCCCCeecCCCceEEEeeeccCccCC-cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--C----
Q 012124 364 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D---- 436 (470)
Q Consensus 364 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~--~---- 436 (470)
.++|.+.|.+. |+.+..|.||.-++++..+.... +.+.+ ....|+-.|..+.||-..--..|.. +
T Consensus 336 ---v~YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~eqF----paqala~ely~e~GiRavElG~~~~~rd~ktg 407 (471)
T COG3033 336 ---VQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQF----PAQALACELYKEAGIRAVELGSFSLGRDPKTG 407 (471)
T ss_pred ---HHHHHHHHHhc-CCeeEecCCCceEEeehhhhcCCCChhhC----cHHHHHHHHHHHhCeeeeeeeceecccCCCcc
Confidence 45677777777 99898999998888875332111 11112 5677888888888997765444421 0
Q ss_pred -------CcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012124 437 -------TCIRISYAA---SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 437 -------~~iRls~~~---~~~~i~~~l~~l~~~l~~ 463 (470)
.-+|+++.. +.+-++-.++.++++.+.
T Consensus 408 ~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 408 KQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 369999875 778888888888877664
No 377
>COG2186 FadR Transcriptional regulators [Transcription]
Probab=99.17 E-value=2.3e-12 Score=118.37 Aligned_cols=56 Identities=7% Similarity=-0.017 Sum_probs=53.0
Q ss_pred ccccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 8 STSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 8 ~~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
...+|.+|.++||++|||.|+||++|||||+| |+..|+.+|+|++++| +||||...
T Consensus 19 i~~~I~~g~~~~G~~LP~EreLae~fgVSR~~vREAl~~L~a~Glve~r~G-~Gt~V~~~ 77 (241)
T COG2186 19 IGALIVSGELPPGDRLPSERELAERFGVSRTVVREALKRLEAKGLVEIRQG-SGTFVRPR 77 (241)
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHCCCcHHHHHHHHHHHHCCCeeecCC-CceEecCC
Confidence 45689999999999999999999999999999 9999999999999999 99999763
No 378
>COG2188 PhnF Transcriptional regulators [Transcription]
Probab=99.16 E-value=1.8e-12 Score=118.90 Aligned_cols=55 Identities=9% Similarity=-0.056 Sum_probs=52.3
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
...|.+|+++||++|||.|+||+++||||.| |+++|+++|+|+.+.| +||||...
T Consensus 17 ~~~I~~G~~~~G~~LPsE~eLa~~f~VSR~TvRkAL~~L~~eGli~r~~G-~GtfV~~~ 74 (236)
T COG2188 17 RQRIESGELPPGDKLPSERELAEQFGVSRMTVRKALDELVEEGLIVRRQG-KGTFVASP 74 (236)
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHHCCcHHHHHHHHHHHHHCCcEEEEec-CeeEEcCc
Confidence 3579999999999999999999999999999 9999999999999999 99999764
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.15 E-value=1.7e-08 Score=96.26 Aligned_cols=221 Identities=19% Similarity=0.147 Sum_probs=155.9
Q ss_pred hHHHHHHHHHHHHcC-CCCCCCCcCcHHHHHH-HHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE----
Q 012124 109 PVLIAEAGINAIREG-FTRYTPNAGTLELRSA-ICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI---- 182 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~-~~~y~~~~g~~~lr~~-ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vl---- 182 (470)
.++..+++....... ...|.-..|...-|.. +++.+ .+. ...+.++++++.+.++.+++.++.+++..|+
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~---~~~-~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~ 115 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELL---CGL-TGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGE 115 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHH---hcc-cchhheeeECCcHHHHHHHHhhhccCCeEEEEccc
Confidence 677788888777653 1244344443333332 33333 343 3467899999999999999999876544443
Q ss_pred -EcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012124 183 -IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHP 260 (470)
Q Consensus 183 -v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l-~~p~nPtG~~~s~~~~~~l~~~~~~~~ 260 (470)
|+ ++.++..++++..|++++.+-... .-...+++.+|++++++++- .+.|.+.-..++ .++++++|+++
T Consensus 116 lV~-gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~- 186 (395)
T COG1921 116 LVE-GGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAHEK- 186 (395)
T ss_pred ccc-CCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHHHc-
Confidence 34 688889999999999999987532 25788999999999998875 444544434556 77789999999
Q ss_pred CEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCCChHHHH
Q 012124 261 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQK 340 (470)
Q Consensus 261 ~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~ 340 (470)
++++|+|++-+...-. .+.+..+.. .+-.+++.|-.|.+ .|.+.|.+++.+++++.+++..-....-.......
T Consensus 187 ~lpvivD~aSg~~v~~---e~~l~~~la-~GaDLV~~SgdKll--gGPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla 260 (395)
T COG1921 187 GLPVIVDLASGALVDK---EPDLREALA-LGADLVSFSGDKLL--GGPQAGIIVGKKELIEKLQSHPLKRALRVDKETLA 260 (395)
T ss_pred CCCEEEecCCcccccc---ccchhHHHh-cCCCEEEEecchhc--CCCccceEechHHHHHHHHhhhhhhhhhcCcHhHH
Confidence 9999999988764321 223333222 35558889999998 47789999999999999987655555556777777
Q ss_pred HHHHHHhc
Q 012124 341 AGVAALGL 348 (470)
Q Consensus 341 a~~~~l~~ 348 (470)
++.++|+.
T Consensus 261 ~l~~aLe~ 268 (395)
T COG1921 261 ALEAALEL 268 (395)
T ss_pred HHHHHHHH
Confidence 77777764
No 380
>TIGR02404 trehalos_R_Bsub trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli.
Probab=99.15 E-value=2.3e-12 Score=118.56 Aligned_cols=54 Identities=9% Similarity=-0.022 Sum_probs=51.4
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
...|.+|.++||+||||.++||+++||||.| |+++|++||+|+.++| +||||..
T Consensus 10 ~~~I~~g~~~~G~~LPsE~eLa~~~gVSR~TVR~Al~~L~~eGli~r~~G-~GTfV~~ 66 (233)
T TIGR02404 10 EQKITHGQYKEGDYLPSEHELMDQYGASRETVRKALNLLTEAGYIQKIQG-KGSIVLN 66 (233)
T ss_pred HHHHHhCCCCCCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeCC-ceEEEec
Confidence 3568999999999999999999999999999 9999999999999999 9999964
No 381
>TIGR02325 C_P_lyase_phnF phosphonates metabolism transcriptional regulator PhnF. All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond.
Probab=99.14 E-value=3e-12 Score=118.40 Aligned_cols=53 Identities=15% Similarity=0.019 Sum_probs=51.0
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
..|.+|.++||+||||.|+||+++||||.| |+++|+.||+|++++| +||||..
T Consensus 19 ~~I~~g~~~~G~~LPsE~eLa~~~~VSR~TvR~Al~~L~~eGli~r~~G-~GtfV~~ 74 (238)
T TIGR02325 19 QEIAAGHLRAGDYLPAEMQLAERFGVNRHTVRRAIAALVERGLLRAEQG-RGTFVAA 74 (238)
T ss_pred HHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-CEEEECC
Confidence 568999999999999999999999999999 9999999999999999 9999964
No 382
>PRK14999 histidine utilization repressor; Provisional
Probab=99.14 E-value=3.1e-12 Score=118.25 Aligned_cols=54 Identities=15% Similarity=0.025 Sum_probs=51.3
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
...|.+|.++||+||||.|+||+++||||+| |+++|+.||+|+.++| +||||..
T Consensus 22 ~~~I~~g~~~~G~~LPsE~eLa~~~gVSR~TVR~Al~~L~~eGli~r~~G-kGTfV~~ 78 (241)
T PRK14999 22 CKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWLVRLQG-VGTFVAE 78 (241)
T ss_pred HHHHHcCCCCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-cEEEECC
Confidence 3568999999999999999999999999999 9999999999999999 9999965
No 383
>PRK11402 DNA-binding transcriptional regulator FrlR; Provisional
Probab=99.12 E-value=4e-12 Score=117.59 Aligned_cols=55 Identities=15% Similarity=-0.013 Sum_probs=51.7
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
...|.+|.++||+||||.++||++|||||.| |.++|++||+|+.+.| +||||...
T Consensus 19 ~~~I~~G~~~~g~kLPsE~eLa~~~~VSR~TvR~Al~~L~~eGli~r~~G-~GTfV~~~ 76 (241)
T PRK11402 19 LDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQG-KGTFVQSQ 76 (241)
T ss_pred HHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-ceeEECCC
Confidence 3568999999999999999999999999999 9999999999999999 99999654
No 384
>TIGR02018 his_ut_repres histidine utilization repressor, proteobacterial. This model represents a proteobacterial histidine utilization repressor. It is usually found clustered with the enzymes HutUHIG so that it can regulate its own expression as well. A number of species have several paralogs and may fine-tune the regulation according to levels of degradation intermediates such as urocanate. This family belongs to the larger GntR family of transcriptional regulators.
Probab=99.11 E-value=4.3e-12 Score=116.48 Aligned_cols=54 Identities=11% Similarity=-0.056 Sum_probs=51.5
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
.+.|.+|.++||+||||.|+||+++||||.| |++.|++||+|+.++| +||||..
T Consensus 11 ~~~I~~g~~~~g~~LPsE~eLa~~~~VSR~TVR~Al~~L~~eGli~r~~G-~GtfV~~ 67 (230)
T TIGR02018 11 LERIRSGEWPPGHRIPSEHELVAQYGCSRMTVNRALRELTDAGLLERRQG-VGTFVAE 67 (230)
T ss_pred HHHHHhCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-CEEEEcc
Confidence 4579999999999999999999999999999 9999999999999999 9999965
No 385
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.11 E-value=4e-08 Score=95.96 Aligned_cols=329 Identities=18% Similarity=0.251 Sum_probs=174.8
Q ss_pred HHHHHHHHHHhcCCC-eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CcCcHHHHHHHHHHHHHHcCCCCCC
Q 012124 81 AITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTP 154 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~-~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~l~~~~g~~~~~ 154 (470)
++.+....+.+++.. .-.++.|.-+.-.|+.+.+.+.+.- +..+.|+| ++|..+..-..+..+.+..|.++
T Consensus 51 e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~-ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdv-- 127 (429)
T PF02347_consen 51 ELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRP-EFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDV-- 127 (429)
T ss_dssp HHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCH-HCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSE--
T ss_pred HHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccCh-hhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCc--
Confidence 445555555555442 1123344444334555544222211 12456665 57877777778888888788653
Q ss_pred CcEEEecChHHHHHHHHHHh---cCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 155 DQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 155 ~~i~it~g~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
-|.-+-.|++.+-+.++.+. -+.+++|+++.-.+|.+..+++. .|.+++.++.+.++. .| +++
T Consensus 128 aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~--~d--------~~~ 197 (429)
T PF02347_consen 128 ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGT--TD--------DDD 197 (429)
T ss_dssp E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCS--B---------STT
T ss_pred cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCC--cc--------ccC
Confidence 24456667777766665553 23346999999999999886554 899999999875432 33 568
Q ss_pred ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccc---
Q 012124 228 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA--- 304 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~--- 304 (470)
+.+|++.+|+. .|..-+ +++|.++++++ |.++|. .+.- +.... ..-+++.+-.|++++ +|.||
T Consensus 198 ~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~-gal~~~-~ad~-~aL~~------l~~Pge~GADI~vg~-~Q~fg~p~ 263 (429)
T PF02347_consen 198 TAAVMVQNPNT-FGVFED---IKEIADIAHAA-GALVIV-GADP-NALGG------LKSPGEYGADIVVGE-HQTFGIPM 263 (429)
T ss_dssp EEEEEEESS-T-TSB--T---HHHHHHHHHHT-T-EEEE-CGGC-CGCCT------C--GGGGT-SEEEEC-CTTTT---
T ss_pred eEEEEeecCCC-CceEee---HHHHHHHHHHc-CCEEEE-ecCH-HHHhC------cCChhhcCccEEeeC-CCCCcccC
Confidence 89999999986 677766 89999999999 888875 2221 11111 111222344577776 66664
Q ss_pred -cccceeeEEEcCHHHHHHH----------------------------HHHhhhccCCCChHHHH--HHHHHHhcCCCCh
Q 012124 305 -MTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQK--AGVAALGLGYAGG 353 (470)
Q Consensus 305 -~~G~r~G~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q~--a~~~~l~~~~~~~ 353 (470)
..|--+|++.+.+++++.+ ++-+...++|++..... ++..+... +.
T Consensus 264 ~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~---G~ 340 (429)
T PF02347_consen 264 GFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL---GP 340 (429)
T ss_dssp CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH---HH
T ss_pred CCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh---CH
Confidence 3455678888887766543 33344556666655433 22333333 47
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEEeee-ccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012124 354 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID-FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 432 (470)
Q Consensus 354 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~ 432 (470)
+.++++.+....+..++.+.|+++.+..+.. .-||=++. .++.. ...++.++... .|+.. .
T Consensus 341 ~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~--~~f~e~v~~~~~~~-----------~~~~l~~~~~~-~gl~~----~ 402 (429)
T PF02347_consen 341 EGLREIAERIHLNAHYLAERLKKIYGLPFDN--PFFFEFVVVFSKDK-----------EVEELLKRGIE-GGLNL----R 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTTBECSSS--SSBSSEEEEESS-H-----------HHHHHHHTT-----EEE----G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccCC--CCceeeeeecCCcH-----------HHHHHHHHHHh-cCCCc----c
Confidence 8899999999999999999999863444432 22321222 11100 22233333322 24322 1
Q ss_pred CCCCCcEEEEeec--CHHHHHHHHHHH
Q 012124 433 FGDDTCIRISYAA--SLTTLQAAVERI 457 (470)
Q Consensus 433 f~~~~~iRls~~~--~~~~i~~~l~~l 457 (470)
+...+++-++++- +.++|+..++.|
T Consensus 403 ~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 2234578888875 788998887754
No 386
>PRK09764 DNA-binding transcriptional repressor MngR; Provisional
Probab=99.09 E-value=6.4e-12 Score=116.03 Aligned_cols=54 Identities=9% Similarity=0.041 Sum_probs=51.5
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
.+.|.+|.++||+||||.++||+++||||.| |.++|+.||+|+.++| +||||..
T Consensus 15 ~~~I~~g~~~~G~~LPsE~eL~~~~~VSR~TvR~Al~~L~~eGli~r~~G-~GtfV~~ 71 (240)
T PRK09764 15 REQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQG-SGTYVKE 71 (240)
T ss_pred HHHHHcCCCCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-ceeEEcc
Confidence 3579999999999999999999999999999 9999999999999999 9999965
No 387
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.09 E-value=2.6e-07 Score=87.90 Aligned_cols=337 Identities=15% Similarity=0.174 Sum_probs=207.1
Q ss_pred HHHHHHHHHHhcCCCeE-EccCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----cCcHHHHHHHHHHHHHHcCCCCCC
Q 012124 81 AITDQATALAQAGVSVI-RLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 154 (470)
Q Consensus 81 ~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~-----~g~~~lr~~ia~~l~~~~g~~~~~ 154 (470)
+.....+.+..+++.+. .++.|.-+.-.|+.+.+.+.+.- ...+.|+|. +|..+..=..+..+....|.++.
T Consensus 61 e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~p-ewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA- 138 (450)
T COG0403 61 EALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENP-EWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA- 138 (450)
T ss_pred HHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCc-cccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc-
Confidence 33444455555555322 34566666666777775544421 124567664 55555444445555555676554
Q ss_pred CcEEEecChHHHHHHHHHHhc---CCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCcCCCCCccCHHhHhhhccCC
Q 012124 155 DQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEK 227 (470)
Q Consensus 155 ~~i~it~g~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 227 (470)
|--+-.+++.+-+.++.+.. ++.++|+|+.-+||.+..+++. .|.+++.++.+ |++.|++.....
T Consensus 139 -NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~ 210 (450)
T COG0403 139 -NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGD 210 (450)
T ss_pred -cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccC
Confidence 55556677777776666542 3358999999999999988764 56777777653 778888873347
Q ss_pred ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEE-eccccccccCCCCcccccccCCCCCceEEEeccC---ccc
Q 012124 228 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS-DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS---KAF 303 (470)
Q Consensus 228 ~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~-Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~s---K~~ 303 (470)
+-++++..|+. .| ...+++++|.+.++++ +.++++ =|.-+ ..+..-++..+-.|++|+.. =.+
T Consensus 211 ~~gv~vQyP~~-~G--~~~~d~~~l~~~~h~~-~al~~v~aDpla---------L~LL~pPGe~GADIvvG~~QrfGvPm 277 (450)
T COG0403 211 VFGVLVQYPNT-FG--IVEEDLRALIEAAHSA-GALVIVAADPLA---------LGLLKPPGEFGADIVVGSAQRFGVPM 277 (450)
T ss_pred eEEEEEecCCC-CC--ccchhHHHHHHHHhhc-CCEEEEEechhH---------hhccCCccccCCceEEecCcccCCCc
Confidence 78888877764 45 2334599999999999 776663 12111 12223344456678888754 445
Q ss_pred ccccceeeEEEcCHHHHHH----------------------------HHHHhhhccCCCChHHHHHHHHHHhcCCCChHH
Q 012124 304 AMTGWRLGYIAGPKHFVAA----------------------------CNKIQSQFTSGASSISQKAGVAALGLGYAGGEV 355 (470)
Q Consensus 304 ~~~G~r~G~~~~~~~~~~~----------------------------l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 355 (470)
|+.|-.+||+.+.+++.+. +++-+...++|++......++.....- .+...
T Consensus 278 gfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~-hGp~G 356 (450)
T COG0403 278 GFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVY-HGPQG 356 (450)
T ss_pred CCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHH-hChHH
Confidence 6667778999888876544 345556667777665443333222111 14788
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC-CCeecCCCceEE--EeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012124 356 VSKMVKAFRERRDFLVKSFGELE-GVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 432 (470)
Q Consensus 356 ~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~ 432 (470)
++++..+..+...++.+.|++.. |+++... .|| +.++++.. ....+.++.. ..|+-+..-.
T Consensus 357 Lk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~------------~~~~l~~~~~-~~G~~L~~~~- 420 (450)
T COG0403 357 LKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEE------------VAEALLAAAI-AGGINLRRVD- 420 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchh------------HHHHHHHHHH-hcCCceeeec-
Confidence 99999999999999999999752 5666533 444 23444421 3444444433 3466554321
Q ss_pred CCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 433 FGDDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 433 f~~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
.+++-+++.- ++++++..++.+...
T Consensus 421 ---~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 421 ---ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ---CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 2366677765 678898888877654
No 388
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.08 E-value=1.9e-07 Score=96.19 Aligned_cols=280 Identities=13% Similarity=0.096 Sum_probs=169.0
Q ss_pred ChHHHHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC----C-----
Q 012124 108 TPVLIAE-AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS----P----- 177 (470)
Q Consensus 108 ~~~~~~~-a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~----~----- 177 (470)
+++.+.. .+...+......|...++...+.+.+.+++.+.+|.+- ..=.+|+|++++....+....+ |
T Consensus 95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~ 172 (608)
T TIGR03811 95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKE 172 (608)
T ss_pred CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence 3455544 44444444556666677889999999999999999752 3344788888877655443211 0
Q ss_pred -------------------------------------------CC------eEEEcCCCCCChHHHHHHcCC---EEEEe
Q 012124 178 -------------------------------------------GD------EVIIPAPFWVSYPEMARIADA---TPVIL 205 (470)
Q Consensus 178 -------------------------------------------gd------~Vlv~~p~y~~~~~~~~~~g~---~~~~v 205 (470)
|. +|+++.-.|.++...+..+|+ +++.|
T Consensus 173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V 252 (608)
T TIGR03811 173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV 252 (608)
T ss_pred ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe
Confidence 00 577888889999999999999 58999
Q ss_pred cCcCCCCCccCHHhHhhhccC----C--ceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE--EEEEeccccccc---
Q 012124 206 PTRISENFLLDPKVLESKLTE----K--SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL--LVLSDEIYEHII--- 274 (470)
Q Consensus 206 ~~~~~~~~~~d~~~l~~~l~~----~--~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~--~iI~Dd~~~~~~--- 274 (470)
|++ +++.+|++.|++.+++ + +-+|+-+..+..+|.+=+.+++.+|++.++++ |+ |+.+|.+|+.+.
T Consensus 253 pvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~-gl~~~lHVDAAyGG~~~~l 329 (608)
T TIGR03811 253 PVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKE-GIYFYLHVDAAYGGYGRAI 329 (608)
T ss_pred ecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHc-CCceeEeeeccccchhhhh
Confidence 996 4456999999998853 2 22344466678899999955555555555888 86 799999999742
Q ss_pred cCCCC--cccc------------------------c-ccCCCCCceEEEeccCcccccccceeeEEEcCHH-HHHHHHHH
Q 012124 275 YAPAT--HTSF------------------------A-SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKI 326 (470)
Q Consensus 275 ~~~~~--~~~~------------------------~-~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~-~~~~l~~~ 326 (470)
+-... ..++ . .+.+...-.=+.-.++|.+. ....+|.++.+.. +.+.+...
T Consensus 330 ~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~ 408 (608)
T TIGR03811 330 FLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYF 408 (608)
T ss_pred hccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcC
Confidence 11100 0000 0 01111111223446899985 5678898776543 33333211
Q ss_pred hhh--------------ccCCCChHHHHHHH--HHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccC------CCCee--
Q 012124 327 QSQ--------------FTSGASSISQKAGV--AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL------EGVKM-- 382 (470)
Q Consensus 327 ~~~--------------~~~~~~~~~q~a~~--~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~g~~~-- 382 (470)
..+ .....+.+...++. ..++.-.++.+.+.++.+...+.++++.+.|++. +.+++
T Consensus 409 a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~ 488 (608)
T TIGR03811 409 ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHP 488 (608)
T ss_pred cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEe
Confidence 000 01123333322222 2222210135667778888888888888888773 34553
Q ss_pred -cCCCceEEEee
Q 012124 383 -SEPQGAFYLFI 393 (470)
Q Consensus 383 -~~~~~g~~~~~ 393 (470)
.+|+-++..|.
T Consensus 489 ~~~pdlniV~Fr 500 (608)
T TIGR03811 489 LTKPDFNMVDYV 500 (608)
T ss_pred cCCCCcceEEEE
Confidence 45666764443
No 389
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.06 E-value=4.5e-08 Score=93.75 Aligned_cols=308 Identities=16% Similarity=0.157 Sum_probs=192.7
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc----C-CC---CeEEEcCCCCCChHHHHHHcCCE
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC----S-PG---DEVIIPAPFWVSYPEMARIADAT 201 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~----~-~g---d~Vlv~~p~y~~~~~~~~~~g~~ 201 (470)
.++..++..++.+++.+.++-+ +...=..|+|+++++.++.+... + .| ..++.+.-.+..+...++.++.+
T Consensus 115 fp~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 115 FPVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE 193 (491)
T ss_pred cchhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence 3577888889999998888865 22333578899999665555421 1 22 24555555566667778889999
Q ss_pred EEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEEeccccccccC-CCC
Q 012124 202 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYA-PAT 279 (470)
Q Consensus 202 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~-~~~~~iI~Dd~~~~~~~~-~~~ 279 (470)
+..||+++ +.+.+|+..+.+.+++++.+++...|+.|+|..=+ .++|.++..+ + ++.|.+|.+-+.|.-. +..
T Consensus 194 l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w-~ipiHvDa~~GgFi~p~~~~ 268 (491)
T KOG1383|consen 194 LREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIED---VEKLADLLLEIW-DIPIHVDACLGGFINPAGYL 268 (491)
T ss_pred EEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccchhh---HHHHHHHHHHHh-CCceeecccCcccccccccc
Confidence 99999986 67899999999999999999999999999998766 8888888888 9 9999999999887652 111
Q ss_pred cccccccCCCCCceEEEec-cCcccccccceeeEEEcCH-HHH-HH-------HHHHhhhccCCCChHH-HHHH--HHHH
Q 012124 280 HTSFASLPGMWERTLTVNG-FSKAFAMTGWRLGYIAGPK-HFV-AA-------CNKIQSQFTSGASSIS-QKAG--VAAL 346 (470)
Q Consensus 280 ~~~~~~~~~~~~~~i~i~S-~sK~~~~~G~r~G~~~~~~-~~~-~~-------l~~~~~~~~~~~~~~~-q~a~--~~~l 346 (470)
...-+++.. ..|-.+.. -+| ||+.--.+||++-.. ++. .+ +-......+.+.|..+ |.++ ++++
T Consensus 269 ~~~~fdFr~--p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~ 345 (491)
T KOG1383|consen 269 NEEEFDFRV--PGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALM 345 (491)
T ss_pred CccccccCC--CCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHH
Confidence 111122211 22222222 223 444333478877432 221 11 1111111222222222 2222 2334
Q ss_pred hcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCC-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCE
Q 012124 347 GLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 425 (470)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI 425 (470)
.. +.+...+..+...+....+.+.+++++++.+... .-.+.+| .-... +.-++...|.+. |-
T Consensus 346 ~l---G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~-~s~~~------------~i~elsd~l~~~-GW 408 (491)
T KOG1383|consen 346 SL---GEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF-GSNDV------------NIFELSDLLRKK-GW 408 (491)
T ss_pred Hh---hHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc-cCCcc------------chhhhhHHHHhc-Cc
Confidence 44 3555666666677888889999999888877643 3344333 22221 566777776655 65
Q ss_pred EEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhCC
Q 012124 426 ALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 426 ~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~l~~~~~ 466 (470)
.+ |... .+..+-+++.. .++--++++..|++++++++.
T Consensus 409 ~l-nalq--~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 409 IL-NALQ--FPAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred Cc-cccC--CCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 44 3322 24466666654 444467788888888887754
No 390
>PRK10079 phosphonate metabolism transcriptional regulator PhnF; Provisional
Probab=99.05 E-value=1.3e-11 Score=114.19 Aligned_cols=52 Identities=6% Similarity=-0.098 Sum_probs=48.7
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
..|.+ .++||+||||.++||+++||||.| |+++|++||+|++++| +||||..
T Consensus 23 ~~I~~-~~~~G~~LPsE~eLa~~~~VSR~TVR~Al~~L~~eGli~r~~G-~GtfV~~ 77 (241)
T PRK10079 23 QELRQ-HYRCGDYLPAEQQLAARYEVNRHTLRRAIDQLVEKGWVQRRQG-VGVLVLM 77 (241)
T ss_pred HHHhc-ccCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-CEEEEec
Confidence 34665 999999999999999999999999 9999999999999999 9999965
No 391
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.02 E-value=5e-07 Score=83.90 Aligned_cols=334 Identities=16% Similarity=0.114 Sum_probs=184.0
Q ss_pred EEccCCCCCCCChHHHHHHHHHHHHcC-------CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCC--cEEEecChHHHH
Q 012124 97 IRLAAGEPDFDTPVLIAEAGINAIREG-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPD--QILVSNGAKQSI 167 (470)
Q Consensus 97 i~l~~g~~~~~~~~~~~~a~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~--~i~it~g~~~al 167 (470)
|.|-..++. +..++.+++-..+.+. ...|+..+-+.+..-...++-.+.|+.+-... ||-.-+|+ .|.
T Consensus 43 ieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGS-PAN 119 (477)
T KOG2467|consen 43 IELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGS-PAN 119 (477)
T ss_pred eeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCC-chh
Confidence 444433332 4677788888777663 12233222222222222333334456433322 44444555 456
Q ss_pred HHHHHHhcCCCCeEEEcC-CCCCChHHHHHHcCC---------EEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCC
Q 012124 168 LQAVLAVCSPGDEVIIPA-PFWVSYPEMARIADA---------TPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSP 236 (470)
Q Consensus 168 ~~~~~~l~~~gd~Vlv~~-p~y~~~~~~~~~~g~---------~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p 236 (470)
..+..++++|+|+|+-.+ |.=....+-...-+- +-.++.+++..+ -||.|.||+.... ++|+|+--..
T Consensus 120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~iiaG~S 198 (477)
T KOG2467|consen 120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLIIAGTS 198 (477)
T ss_pred hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEEEeccc
Confidence 668889999999998433 321111111111111 222344554444 5899999987644 7787664222
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcC
Q 012124 237 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 316 (470)
Q Consensus 237 ~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~ 316 (470)
.++ ..++-.++ .++|.+. +.+++.|-++-.........++..... .|+..|..|++ .|-|-|.+...
T Consensus 199 aY~--R~~DYaR~---R~Iad~~-gA~Lm~DMAHISgLVAA~vipsPFey~-----DiVTTTTHKsL--RGPRg~mIFyR 265 (477)
T KOG2467|consen 199 AYS--RLIDYARF---RKIADKV-GAYLMADMAHISGLVAAGVIPSPFEYC-----DIVTTTTHKSL--RGPRGAMIFYR 265 (477)
T ss_pred cch--hhccHHHH---HHHHHhc-CceeehhhhhHHHHHhcccCCCccccc-----ceeeccccccc--cCCcceeEEEe
Confidence 333 34554444 5555577 899999999754222222223332222 38888899987 78888877754
Q ss_pred H---------------HHHHHHHHH-hhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 012124 317 K---------------HFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 380 (470)
Q Consensus 317 ~---------------~~~~~l~~~-~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 380 (470)
+ ++-+++... ......++......+++.+|..... ...+...++...+.+.|.+.|.+. |+
T Consensus 266 kGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~t--pefk~Yq~qV~~Nakala~~l~~~-Gy 342 (477)
T KOG2467|consen 266 KGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMT--PEFKEYQKQVLKNAKALASALISR-GY 342 (477)
T ss_pred ccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence 3 123333322 2223345555566666667765432 334445555666777888888877 88
Q ss_pred eecCC-CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-----CCcEEEEeec------CHH
Q 012124 381 KMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-----DTCIRISYAA------SLT 448 (470)
Q Consensus 381 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~-----~~~iRls~~~------~~~ 448 (470)
++... ..+..+.+++... + -+-.-+++.++..+|.+.--..++. ++.+|+.... .++
T Consensus 343 ~lvtgGTDnHlvLvDLr~~-G----------~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~ 411 (477)
T KOG2467|consen 343 KLVTGGTDNHLVLVDLRPK-G----------VDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEE 411 (477)
T ss_pred eEecCCccceEEEEecccc-C----------CchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHH
Confidence 76533 3344456677542 1 2233345566666776655555543 6899997532 567
Q ss_pred HHHHHHHHHHHHH
Q 012124 449 TLQAAVERIKKGL 461 (470)
Q Consensus 449 ~i~~~l~~l~~~l 461 (470)
|+++..+-|.+++
T Consensus 412 df~~v~~fi~~av 424 (477)
T KOG2467|consen 412 DFEKVADFIDRAV 424 (477)
T ss_pred HHHHHHHHHHHHH
Confidence 7777776666554
No 392
>PRK04984 fatty acid metabolism regulator; Provisional
Probab=99.02 E-value=1.9e-11 Score=113.07 Aligned_cols=54 Identities=15% Similarity=-0.103 Sum_probs=51.4
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
...|.+|.++||+||||.|+||++|||||+| |+.+|+.+|+|+.++| +||||+.
T Consensus 17 ~~~I~~g~l~pG~~LPsE~eLae~~gVSRt~VReAL~~L~~eGlv~~~~g-~G~~V~~ 73 (239)
T PRK04984 17 IESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHG-KPTKVNN 73 (239)
T ss_pred HHHHHcCCCCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeCC-CeeEeCC
Confidence 3579999999999999999999999999999 9999999999999999 9999965
No 393
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.98 E-value=6.9e-08 Score=87.09 Aligned_cols=329 Identities=13% Similarity=0.079 Sum_probs=180.2
Q ss_pred hHHHHHHHHHHHHcC--CCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEEE
Q 012124 109 PVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVII 183 (470)
Q Consensus 109 ~~~~~~a~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l---~~~gd~Vlv 183 (470)
+|++.++..+++..- ..++-. .+|-+......... ..-+-+++++++++|.+++++.. .+..|.| +
T Consensus 63 hp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~stl----PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI-t 133 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTSTL----PELSVCFFVNSGSEANDLALRLARNFTKHQDVI-T 133 (452)
T ss_pred CHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhcC----CCceEEEEecCCchhhHHHHHHHHhhcccCceE-E
Confidence 677777777665432 222211 23333322222211 12356788999999999998864 3444554 5
Q ss_pred cCCCCCChHHHH-HH------cCC-----EEEEe-cCcC--CCCCc-----------cCHHhHhhhcc----C--CceEE
Q 012124 184 PAPFWVSYPEMA-RI------ADA-----TPVIL-PTRI--SENFL-----------LDPKVLESKLT----E--KSRLL 231 (470)
Q Consensus 184 ~~p~y~~~~~~~-~~------~g~-----~~~~v-~~~~--~~~~~-----------~d~~~l~~~l~----~--~~~~i 231 (470)
.+..|+++.... +. .|. +.+.| |..+ .+.+. .-.|.+++.++ . ++.+.
T Consensus 134 ldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAf 213 (452)
T KOG1403|consen 134 LDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAF 213 (452)
T ss_pred EechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHH
Confidence 567777765321 11 111 11111 1110 00000 11123333332 1 22233
Q ss_pred EEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccccccccee
Q 012124 232 ILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 310 (470)
Q Consensus 232 ~l~~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~ 310 (470)
+-.+-+.-.|+++| ....+++++..+.+ |-+.|.||+.-.|..-+.....+.-. +-+--|-++.|.+| .|.++
T Consensus 214 iAEslQSCGGQiiPPagYFq~Va~~Vr~a-GGv~IaDEVQvGFGRvG~hyWafq~y----~fiPDIVtmgKpmG-NGhPV 287 (452)
T KOG1403|consen 214 IAESLQSCGGQIIPPAGYFQAVADAVRSA-GGVCIADEVQVGFGRVGSHYWAFQTY----NFIPDIVTMGKPMG-NGHPV 287 (452)
T ss_pred HHHHHHhcCCcccCchhHHHHHHHHHhcC-CCeEEeehhhhcccccchhhhhhhhh----ccccchheecccCC-CCCee
Confidence 33555777777655 55789999999999 88888899998865444433333221 11112556889999 99999
Q ss_pred eEEEcCHHHHHHHHH--HhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCC-CCeecC--C
Q 012124 311 GYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GVKMSE--P 385 (470)
Q Consensus 311 G~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~--~ 385 (470)
+.++..+++.+++.. ...+.+++.++++.++..+.++.-+ ++.+.+...+ .-+.|...|+++. ..++++ .
T Consensus 288 a~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e--~E~Lq~ha~~---vG~~L~~lL~~~k~kh~~IGDvR 362 (452)
T KOG1403|consen 288 AAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE--DENLQEHAQQ---VGEKLEVLLRRLKQKHECIGDVR 362 (452)
T ss_pred eEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHh--hhhHHHHHHH---HHHHHHHHHHHHhhhccceeccc
Confidence 999999999999874 4556678899999888888776311 2223333332 2333333333320 122222 2
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCHHHHHHHHHHHHHHHH
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASLTTLQAAVERIKKGLL 462 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~--~~~~~~i~~~l~~l~~~l~ 462 (470)
.-|+|+-+++-+... .+.-....+..+..+|.+.++|++..-.+ ..+-+.|-. +-++++.++.+..|.+++.
T Consensus 363 GvGLFiGIdLVkD~~---tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 363 GVGLFIGIDLVKDRK---TRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred cceEEEeeeeecccc---cCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 447888787743211 10000012345667788888898875321 123444432 2267777777777777664
No 394
>TIGR02812 fadR_gamma fatty acid metabolism transcriptional regulator FadR. Members of this family are FadR, a transcriptional regulator of fatty acid metabolism, including both biosynthesis and beta-oxidation. It is found exclusively in a subset of Gammaproteobacteria, with strictly one copy per genome. It has an N-terminal DNA-binding domain and a less well conserved C-terminal long chain acyl-CoA-binding domain. FadR from this family heterologously expressed in Escherichia coli show differences in regulatory response and fatty acid binding profiles. The family is nevertheless designated equivalog, as all member proteins have at least nominally the same function.
Probab=98.93 E-value=7.6e-11 Score=108.68 Aligned_cols=54 Identities=15% Similarity=-0.100 Sum_probs=51.6
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.++||++|||.|+||++|||||+| |+..|+.+|+|+.++| +||||+.
T Consensus 16 ~~~I~~g~l~pG~~LpsE~~La~~lgVSRtpVREAL~~Le~eGlV~~~~~-~G~~V~~ 72 (235)
T TIGR02812 16 VESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHG-KPTKVNN 72 (235)
T ss_pred HHHHHcCCCCCCCcCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC-CccEecC
Confidence 4579999999999999999999999999999 9999999999999999 9999976
No 395
>PRK10225 DNA-binding transcriptional repressor UxuR; Provisional
Probab=98.91 E-value=8.3e-11 Score=109.94 Aligned_cols=54 Identities=7% Similarity=-0.071 Sum_probs=51.6
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.++||++|||.|+||++|||||+| |+.+|+.+|+|+.++| +|+||..
T Consensus 19 ~~~I~~g~l~pG~~LpsE~eLa~~~gVSRtpVREAL~~L~~eGlV~~~~~-~G~~V~~ 75 (257)
T PRK10225 19 RDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRG-AGIYVLD 75 (257)
T ss_pred HHHHHhCCCCCCCcCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEecC-CEEEEeC
Confidence 4679999999999999999999999999999 9999999999999999 9999965
No 396
>PRK09990 DNA-binding transcriptional regulator GlcC; Provisional
Probab=98.91 E-value=8.4e-11 Score=109.54 Aligned_cols=55 Identities=9% Similarity=-0.043 Sum_probs=51.9
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
-..|.+|.++||++|||.|+||+.|||||+| |...|+.+|+|+.++| +|+||+..
T Consensus 17 ~~~I~~g~l~pG~~LPsE~eLa~~~gVSRtpVREAL~~L~~eGlV~~~~~-~G~~V~~~ 74 (251)
T PRK09990 17 ERLIVDGVLKVGQALPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQG-RGSFVARL 74 (251)
T ss_pred HHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeCC-CeeEEecC
Confidence 4579999999999999999999999999999 9999999999999999 99999753
No 397
>PRK11523 DNA-binding transcriptional repressor ExuR; Provisional
Probab=98.91 E-value=8.6e-11 Score=109.52 Aligned_cols=54 Identities=13% Similarity=-0.082 Sum_probs=51.3
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.++||+||||.|+||++|||||+| |+..|+.+|+|+.++| +|+||..
T Consensus 18 ~~~I~~g~l~pG~~LpsE~eLae~~gVSRtpVREAL~~L~~eGlV~~~~~-~G~~V~~ 74 (253)
T PRK11523 18 KERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKG-SGIHVVS 74 (253)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-CeeEEec
Confidence 3578899999999999999999999999999 9999999999999999 9999965
No 398
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.91 E-value=7.5e-07 Score=84.83 Aligned_cols=309 Identities=18% Similarity=0.156 Sum_probs=187.3
Q ss_pred CcCcHHHHHHHHHHHHHHcCCCCCCCcEEE--ecChHHHHH--HHHHHh-cCCC----CeEEEcCCCCCChHHHHHHcCC
Q 012124 130 NAGTLELRSAICHKLKEENGLSYTPDQILV--SNGAKQSIL--QAVLAV-CSPG----DEVIIPAPFWVSYPEMARIADA 200 (470)
Q Consensus 130 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~i--t~g~~~al~--~~~~~l-~~~g----d~Vlv~~p~y~~~~~~~~~~g~ 200 (470)
.+|+.++...+.+||.+--|. |.|.+ .+|++.-+. ++++.. -..| +.+++++..+..-...+...|.
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~ 179 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGF 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCc
Confidence 489999999999999986664 34444 345543222 233333 2233 6899999999888888999999
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCc
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 280 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~ 280 (470)
+++.|+.+.+++ +|+|+|++.+.+++.++.+++|+. .|+ =++.+++|+++.+++ |..|..|.+.---..+-
T Consensus 180 ~VV~V~~~~~G~--VDlddLk~k~~~~~AalMiTnPsT-~Gv--FE~~I~ei~~ivH~~-Gg~vY~DGANlNA~vG~--- 250 (496)
T COG1003 180 KVVVVKCDENGN--VDLDDLRAKAEDNLAALMITNPST-LGV--FEEDIREICEIVHEA-GGQVYYDGANLNAIVGL--- 250 (496)
T ss_pred eEEEEecCCCCC--ccHHHHHHHhccceeEEEeccCcc-ccc--chhhHHHHHHHHHHc-CCEEEecCcchhhhhcc---
Confidence 999999986655 999999999999999999988864 233 356799999999999 99999998764322221
Q ss_pred ccccccCCCCCceEEEeccCccccc----ccceeeEEEcCHHHHHHHHH------H---------h----hhccCCCChH
Q 012124 281 TSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNK------I---------Q----SQFTSGASSI 337 (470)
Q Consensus 281 ~~~~~~~~~~~~~i~i~S~sK~~~~----~G~r~G~~~~~~~~~~~l~~------~---------~----~~~~~~~~~~ 337 (470)
..-......|..+ -++|+|+. .|-..|=+.+..+++.-+-. . . ....+..|..
T Consensus 251 ---~rPGd~G~DV~Hl-NLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 251 ---ARPGDMGFDVVHL-NLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred ---ccccccccceEEe-ecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcch
Confidence 1111111223333 36677643 33445555444443332211 0 0 0001111222
Q ss_pred HHHHHHHHHh-cCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC-ceEEEeeeccCccCCcccCCCCCCCHHHH
Q 012124 338 SQKAGVAALG-LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESL 415 (470)
Q Consensus 338 ~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (470)
....+..++. . +.+.+++.-+.---+.+++.+.|+..-.+.+.+.. ...=+.++..... .+...+..++
T Consensus 327 il~~a~~YI~~m---G~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~------~~~Gv~~~Dv 397 (496)
T COG1003 327 ILPIAWAYIRMM---GADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLK------KETGVRALDV 397 (496)
T ss_pred HHHHHHHHHHHH---hHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhH------hhcCCcHHHH
Confidence 2222333333 3 35667777777777888999999863112221110 1111222322110 0112378899
Q ss_pred HHHHHHcCCEEEECCCCCC--CCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012124 416 CRYLLDKAQVALVPGDAFG--DDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 466 (470)
Q Consensus 416 ~~~L~~~~gI~v~pg~~f~--~~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~~ 466 (470)
+++|+. +|+.. |-..|- ..+.+-|=.+- +.++++.+++++.++.++.+.
T Consensus 398 AKrLlD-~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 398 AKRLLD-YGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred HHHHHh-cCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999985 48753 334454 45677776665 678999999999888876654
No 399
>PRK09464 pdhR transcriptional regulator PdhR; Reviewed
Probab=98.90 E-value=9.3e-11 Score=109.42 Aligned_cols=54 Identities=15% Similarity=0.006 Sum_probs=51.6
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.++||++|||.++||++|||||+| |+.+|+.+|+|+.++| +|+||..
T Consensus 20 ~~~I~~g~l~pG~~LpsE~eLa~~lgVSRtpVREAL~~L~~eGlv~~~~~-~G~~V~~ 76 (254)
T PRK09464 20 EFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQG-GGTFVQS 76 (254)
T ss_pred HHHHHcCCCCCCCcCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEecC-ceeEEec
Confidence 4679999999999999999999999999999 9999999999999999 9999965
No 400
>PRK10421 DNA-binding transcriptional repressor LldR; Provisional
Probab=98.89 E-value=1.1e-10 Score=108.89 Aligned_cols=54 Identities=13% Similarity=-0.004 Sum_probs=51.6
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.|+||+||||.|+||+.|||||+| |+..|+.+|+|+.++| +|+||+.
T Consensus 12 ~~~I~~g~l~pG~~LpsE~eLae~~gVSRtpVREAL~~Le~~GlV~~~~~-~G~~V~~ 68 (253)
T PRK10421 12 RALIEEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRG-GGTFIRW 68 (253)
T ss_pred HHHHHcCCCCCCCcCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeCC-CeEEEec
Confidence 4579999999999999999999999999999 9999999999999999 9999975
No 401
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.86 E-value=1.2e-07 Score=85.72 Aligned_cols=176 Identities=16% Similarity=0.253 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcC-CCCCChHH----------HHHHcCCEEEEe
Q 012124 137 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPE----------MARIADATPVIL 205 (470)
Q Consensus 137 r~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~----------~~~~~g~~~~~v 205 (470)
|+.+-+-+.+-+|.....-+.-+. ++++||..++..+++|||+.+.-. --|..... .+...|.....+
T Consensus 67 RdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v 145 (416)
T COG4100 67 RDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAV 145 (416)
T ss_pred hhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeec
Confidence 444444444444533222223333 456899999999999999987532 23433333 356678888889
Q ss_pred cCcCCCCCccCHHhHhhhccCCceEEEEc-CCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEEeccccccccCCCCcccc
Q 012124 206 PTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSF 283 (470)
Q Consensus 206 ~~~~~~~~~~d~~~l~~~l~~~~~~i~l~-~p~nPtG~~~s~~~~~~l~~~~~~-~~~~~iI~Dd~~~~~~~~~~~~~~~ 283 (470)
|+..++. +|.+.+++.+++++|+|.+. +..+-.--.++.+++++++++.++ +|++++++|.+|++|.-.. .|.-
T Consensus 146 ~Lt~~gk--iD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~--EPt~ 221 (416)
T COG4100 146 PLTADGK--IDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK--EPTH 221 (416)
T ss_pred ccccCCc--ccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc--Cccc
Confidence 9876554 99999999999999999873 334433345788889999998876 4589999999999976332 2221
Q ss_pred cccCCCCCceEEEeccCcccccccce--eeEEEcCHHHHHHHH
Q 012124 284 ASLPGMWERTLTVNGFSKAFAMTGWR--LGYIAGPKHFVAACN 324 (470)
Q Consensus 284 ~~~~~~~~~~i~i~S~sK~~~~~G~r--~G~~~~~~~~~~~l~ 324 (470)
-+..+..+|+-|.-| .|+- -||+.+.++++++..
T Consensus 222 ------vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 222 ------VGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred ------cchhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence 234477899999876 5543 389999999988753
No 402
>PRK03837 transcriptional regulator NanR; Provisional
Probab=98.84 E-value=2.6e-10 Score=105.62 Aligned_cols=54 Identities=7% Similarity=-0.013 Sum_probs=51.3
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.++||++|||.|+||++|||||+| |+..|+.+|+|+.++| +|+||..
T Consensus 23 ~~~I~~g~l~pG~~Lp~E~~Lae~~gVSRt~VREAL~~L~~eGlv~~~~~-~G~~V~~ 79 (241)
T PRK03837 23 EQMIRSGEFGPGDQLPSERELMAFFGVGRPAVREALQALKRKGLVQISHG-ERARVSR 79 (241)
T ss_pred HHHHHhCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEecC-CceeEec
Confidence 3578999999999999999999999999999 9999999999999999 9999965
No 403
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.80 E-value=8.3e-06 Score=86.88 Aligned_cols=328 Identities=13% Similarity=0.116 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhcCCC-eEEccCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----cCcHHHHHHHHHHHHHHcCCCCC
Q 012124 80 VAITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYT 153 (470)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~-----~g~~~lr~~ia~~l~~~~g~~~~ 153 (470)
.++....+.+..+++. ...++.|.-+.-.|..+.+.+.+.- ...+.|+|. +|..+..=..+..+....|.++.
T Consensus 64 ~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~-~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~va 142 (954)
T PRK12566 64 QAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENP-GWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLA 142 (954)
T ss_pred HHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCc-hhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhh
Confidence 3444555556555542 2345566666556776655444321 114556654 56666555566666666676543
Q ss_pred CCcEEEecChHHHHHHHHHHh---cCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCcCCCCCccCHHhHhhhccC
Q 012124 154 PDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE 226 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 226 (470)
|--+-.+++.+-+.++.+. -+...+|+|++-.+|.+..+++. .|.+++. +++++.+.+
T Consensus 143 --NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~ 207 (954)
T PRK12566 143 --NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAH 207 (954)
T ss_pred --hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCC
Confidence 4344445555444444333 12256899999999998877654 5666553 223344555
Q ss_pred CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEe---ccCccc
Q 012124 227 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN---GFSKAF 303 (470)
Q Consensus 227 ~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~---S~sK~~ 303 (470)
++.++++.+|+. .|.+-+ +++|.++++++ |.++| +.+.- +.. .+..-+++.+-.|.++ +|.=.+
T Consensus 208 ~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~-gal~~-~~~d~-laL------~ll~~Pge~GADI~vG~~Q~fGvp~ 274 (954)
T PRK12566 208 AVFGALLQYPDT-HGEIRD---LRPLIDQLHGQ-QALAC-VAADL-LSL------LVLTPPGELGADVVLGSTQRFGVPM 274 (954)
T ss_pred CEEEEEEECCCC-ceEEcc---HHHHHHHHHHc-CCEEE-EEeCH-HHH------hCCCChhhcCCcEEeeCCCcCCCCC
Confidence 677888888875 677754 88999999998 77766 22211 111 1111233355667777 455556
Q ss_pred ccccceeeEEEcCHHHHHHH----------------------------HHHhhhccCCCChHHHHHHHHHHhcCCCChHH
Q 012124 304 AMTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEV 355 (470)
Q Consensus 304 ~~~G~r~G~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 355 (470)
+..|--.||+.+.+++.+.+ ++-+...+.|++......++.+...- .+.+.
T Consensus 275 ~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~-~Gp~G 353 (954)
T PRK12566 275 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVY-HGPEG 353 (954)
T ss_pred CCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHH-hChHH
Confidence 66677789999888776553 44455566666654443333322110 14677
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeecCCCceEEE--eeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012124 356 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYL--FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 433 (470)
Q Consensus 356 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f 433 (470)
++++.++...+..++.+.|.+. |+++... .||= .+++.. +..++.++..++ ||-++--
T Consensus 354 l~~ia~~~~~~a~~l~~~l~~~-g~~~~~~--~fF~~~~v~~~~-------------~~~~~~~~a~~~-~~n~r~~--- 413 (954)
T PRK12566 354 LKRIAQRVHRLTAILAAGLEAK-GIKRLNR--HFFDTLTLEVGG-------------AQAAIIESAEAA-RINLRIL--- 413 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCccccC--CccceEEEEccC-------------CHHHHHHHHHHC-CCeeEEe---
Confidence 8898888888999999999884 8876432 4442 223311 355676665544 7766542
Q ss_pred CCCCcEEEEeec--CHHHHHHHHHHHH
Q 012124 434 GDDTCIRISYAA--SLTTLQAAVERIK 458 (470)
Q Consensus 434 ~~~~~iRls~~~--~~~~i~~~l~~l~ 458 (470)
.++.+.+|+.- +.++++..+..+.
T Consensus 414 -~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 -GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred -CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 24578888875 7888988888773
No 404
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.79 E-value=1e-08 Score=96.84 Aligned_cols=255 Identities=20% Similarity=0.174 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHc-CCCCCCCCcCcHHHH-HHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCC
Q 012124 109 PVLIAEAGINAIRE-GFTRYTPNAGTLELR-SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 186 (470)
Q Consensus 109 ~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr-~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p 186 (470)
++++++++.+.... ....|.-..|..--| ..+.+.+... +..+..+++++...|+.+++.++. +|.+|++..-
T Consensus 19 ~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRG 93 (367)
T PF03841_consen 19 SEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRG 93 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccc-cccccccccc
Confidence 56666666665443 123332222222222 2223333322 245677888888899998888875 5667776532
Q ss_pred ---CC---CChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCC--cccCCCHHHHHHHHHHHHh
Q 012124 187 ---FW---VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP--TGSVYPKNLLDEIARIVAK 258 (470)
Q Consensus 187 ---~y---~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nP--tG~~~s~~~~~~l~~~~~~ 258 (470)
.+ +...++++..|++++.|-... .-.+++++++++++|.+++..+++|- .|..-+. .++++++++++
T Consensus 94 elVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~ 168 (367)
T PF03841_consen 94 ELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEV-SLEELAELAKE 168 (367)
T ss_dssp ------------------------------------------------------------------------HHHHHHHH
T ss_pred ccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc-cHHHHHHHHhh
Confidence 11 224567888999999888642 24788899999999999987777664 3433222 38899999999
Q ss_pred CCCEEEEEeccccccc----cCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHHHHHHhhhccCCC
Q 012124 259 HPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 334 (470)
Q Consensus 259 ~~~~~iI~Dd~~~~~~----~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 334 (470)
| ++++|+|-.-+.+. |+-...++++.... .+-.+++.|-.|.+| |...|.+++.+++++++++..-.-.+-.
T Consensus 169 ~-~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~Ralrv 244 (367)
T PF03841_consen 169 H-GLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRV 244 (367)
T ss_dssp H-T--EEEE-TTHHHHHHHTT----------CCC-CT-SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B-
T ss_pred c-CCcEEEECCCCCCcCcccccCccccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEee
Confidence 9 99999997764321 22223455555544 466788999999985 4558999999999999987655455556
Q ss_pred ChHHHHHHHHHHhcCCC---------ChHHHHHHHHHHHHHHHHHHHHhccC
Q 012124 335 SSISQKAGVAALGLGYA---------GGEVVSKMVKAFRERRDFLVKSFGEL 377 (470)
Q Consensus 335 ~~~~q~a~~~~l~~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~ 377 (470)
......++.+.|+.-.. ..+.+....+.++++.+.+...|...
T Consensus 245 dK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 245 DKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp -HHHHHHHHHHHHH--------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 77777777766653110 01224444556666777777776653
No 405
>TIGR03337 phnR transcriptional regulator protein. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Salmonella, Vibrio Aeromonas hydrophila, Hahella chejuensis and Psychromonas ingrahamii.
Probab=98.77 E-value=5.3e-10 Score=102.83 Aligned_cols=56 Identities=9% Similarity=-0.054 Sum_probs=52.5
Q ss_pred ccccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 8 STSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 8 ~~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
....|.+|.+.||+||||.++||++|||||.| |++.|+.+|+|+++.| +||||...
T Consensus 10 l~~~I~~g~~~~g~~lPsE~eLa~~~~Vsr~Tvr~Al~~L~~eGli~~~~g-~Gt~V~~~ 68 (231)
T TIGR03337 10 LSYQIRAGALLPGDKLPSERDLGERFNTTRVTIREALQQLEAEGLIYREDR-RGWFVSPP 68 (231)
T ss_pred HHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCeEEEeCC-CEEEECCc
Confidence 45679999999999999999999999999999 9999999999999999 99999653
No 406
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.70 E-value=6.2e-06 Score=77.43 Aligned_cols=327 Identities=9% Similarity=0.036 Sum_probs=184.8
Q ss_pred eEEccCCCCCCCChHHHHHHHHHHHHcC-CCCC------CCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHH
Q 012124 96 VIRLAAGEPDFDTPVLIAEAGINAIREG-FTRY------TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 168 (470)
Q Consensus 96 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~-~~~y------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~ 168 (470)
..+|+.|--. .|+++++.+.+.+..- ..++ ....-...+.+...+.++..++++-+-+=+++-.|++..+.
T Consensus 6 ~~nFsaGPa~--lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAGPAA--LPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCccc--CCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence 3566666433 3555555555444331 1111 11223345666666777778888755545556678888888
Q ss_pred HHHHHhcCCCCe--EEEcCCCCCChHHHHHHcCC--EEEEecCcCC-CCCccCHHhHhhhccCCceEEEEcCCCCCcccC
Q 012124 169 QAVLAVCSPGDE--VIIPAPFWVSYPEMARIADA--TPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 243 (470)
Q Consensus 169 ~~~~~l~~~gd~--Vlv~~p~y~~~~~~~~~~g~--~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~ 243 (470)
.+...|+..+.. |..-..+-..+. -++..+- ++........ -+.-++++.+. +.++...|++|.-..-+|+-
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~-eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~ 160 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSEFAIK-EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVE 160 (365)
T ss_pred HHHHhhhcccCceeEeeeehhHhHHH-HHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceE
Confidence 888888866543 333222222222 2333443 2222221111 12223444332 33333345565555577887
Q ss_pred CCHHHHHHHHHHHHhC-CCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHHHH
Q 012124 244 YPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 322 (470)
Q Consensus 244 ~s~~~~~~l~~~~~~~-~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~~ 322 (470)
++... .. ++.++|.|-.-..+. ....+..++ ++-.+.-|.+|..| ++.++.+++++++
T Consensus 161 v~~~p---------~~~~~~~~v~D~SS~ils----r~iDvsk~d------viyagaQKnlGpaG--ltvvIvr~~~l~r 219 (365)
T COG1932 161 VPELP---------DIGSDGLLVADASSAILS----RPIDVSKYD------VIYAGAQKNLGPAG--LTVVIVRPDLLER 219 (365)
T ss_pred ccCCC---------CCCCCceEEEecccHHhc----CCCChhHcc------eEEEehhhccCccc--eEEEEEcHHHHhc
Confidence 76211 11 136788887655432 122333332 55567889998667 8999999999888
Q ss_pred HHHH------------hhhccCC-CChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-e--e-cCC
Q 012124 323 CNKI------------QSQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV-K--M-SEP 385 (470)
Q Consensus 323 l~~~------------~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~--~-~~~ 385 (470)
+... .....++ +|.+.-+.+...++.-.. ...++.+.++-+++.+.|++.+.+- ++ . + ...
T Consensus 220 ~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~-~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~ 297 (365)
T COG1932 220 AESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKS-QGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKAN 297 (365)
T ss_pred ccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhC-Cccccccchhh
Confidence 7543 1112233 444444444444443111 3347788888899999999999875 32 1 1 134
Q ss_pred CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012124 386 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 386 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~~ 463 (470)
.+-+.+.+++.+. +-+..|+..+. +.|+...-| ....+.+|+|+.. +.++++..++-++.+.++
T Consensus 298 RS~mnV~f~~~~~-----------~ld~~fv~eae-~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 298 RSRMNVTFTLVDA-----------ELDKGFVAEAE-AAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ccceeEEEEcCcH-----------HHHHHHHHHHH-HcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 5567788887653 13456666554 447777776 2345679999876 888888888888777654
Q ss_pred h
Q 012124 464 L 464 (470)
Q Consensus 464 ~ 464 (470)
.
T Consensus 364 ~ 364 (365)
T COG1932 364 Y 364 (365)
T ss_pred h
Confidence 3
No 407
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.69 E-value=2.9e-06 Score=81.11 Aligned_cols=297 Identities=18% Similarity=0.178 Sum_probs=157.7
Q ss_pred HHHHcCCCCCCCcEEEecChHHH-HHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCC-CCccCHHh
Q 012124 144 LKEENGLSYTPDQILVSNGAKQS-ILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKV 219 (470)
Q Consensus 144 l~~~~g~~~~~~~i~it~g~~~a-l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~ 219 (470)
+-+..|+. +-...++.+.++.. +.+.+.++. ..++.|+.+.-.+.+-...++.+|++++.||...++ ....|.+.
T Consensus 65 ~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ 143 (389)
T PF05889_consen 65 ALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEA 143 (389)
T ss_dssp HHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHH
T ss_pred HHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHH
Confidence 33345654 22445666544433 444444443 456888887766656667888999999999964333 33346777
Q ss_pred HhhhccC---CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccC---CCCCce
Q 012124 220 LESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP---GMWERT 293 (470)
Q Consensus 220 l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~---~~~~~~ 293 (470)
+++.+++ ...+.++++++.--+. -.+++++|+++|++| |+..|+..+|+--. ...+..+. ....-.
T Consensus 144 ie~~i~~~G~~~iLcvltttscfapr--~~D~i~~IakiC~~~-~IPhlvNnAYgvQ~-----~~~~~~i~~a~~~GRvd 215 (389)
T PF05889_consen 144 IEAKIEELGADNILCVLTTTSCFAPR--LPDDIEEIAKICKEY-DIPHLVNNAYGVQS-----SKCMHLIQQAWRVGRVD 215 (389)
T ss_dssp HHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHH-T--EEEEGTTTTT------HHHHHHHHHHHHHSTCS
T ss_pred HHHHHHHhCCCCeEEEEEecCccCCC--CCccHHHHHHHHHHc-CCceEEccchhhhH-----HHHHHHHHHHHhcCCcc
Confidence 7777743 4455556555322222 233699999999999 99999999997410 01111110 001223
Q ss_pred EEEeccCcccccccceeeEEEc-CHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHH
Q 012124 294 LTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 372 (470)
Q Consensus 294 i~i~S~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (470)
+++.|.-|.| +-+..-+.+.+ .+..+..+.+....-.+..+ .......++..| ............+...++.+
T Consensus 216 a~vqS~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp--~ld~~itLl~LG---~~g~~~ll~~r~~~f~~l~e 289 (389)
T PF05889_consen 216 AFVQSTDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASP--SLDLFITLLSLG---CTGYGALLKERKASFPYLKE 289 (389)
T ss_dssp EEEEEHHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHH--HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhccc--chHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH
Confidence 7899999999 55555455554 45677777664433333233 333445555543 22333333333344444444
Q ss_pred HhccC---CCCee-cCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCE---E-EECCCCCC-------CCC
Q 012124 373 SFGEL---EGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV---A-LVPGDAFG-------DDT 437 (470)
Q Consensus 373 ~L~~~---~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI---~-v~pg~~f~-------~~~ 437 (470)
.|+++ -+-.+ ..|.....+.+.++...... . .+...|...|..+ || . |.|+..+. +-.
T Consensus 290 rl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~--~----k~~~~lgs~Lf~R-~VsG~RvV~~~~~~~tsh~~~yp~~ 362 (389)
T PF05889_consen 290 RLKKWAEEVGERLLETPRNHISMAFTLDTLYEIS--Q----KDGTFLGSMLFKR-GVSGIRVVTPGGKKQTSHSSNYPCP 362 (389)
T ss_dssp HHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCC--S----SHHHHHHHHHHHT-TEESSEEEETSSCEEETTSS--SSS
T ss_pred HHHHHHHHhhhhhcCCCCCCeeEEEECccchhhc--c----chhhhHHHHHHhC-CcccceeeccCCCcccccCCCCchH
Confidence 44432 03222 23444455556665431100 0 1346777888776 55 2 44443321 236
Q ss_pred cEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 438 CIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 438 ~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
|+-++.+. +.+|++.++++|+++++
T Consensus 363 Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 363 YLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 78885554 99999999999999875
No 408
>smart00345 HTH_GNTR helix_turn_helix gluconate operon transcriptional repressor.
Probab=98.65 E-value=1.4e-09 Score=77.02 Aligned_cols=51 Identities=8% Similarity=-0.080 Sum_probs=47.4
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
..|..+.+.+|.+|||.++||+.++||++| ++++|+++|+|...+| .|+||
T Consensus 7 ~~i~~~~~~~~~~l~s~~~la~~~~vs~~tv~~~l~~L~~~g~i~~~~~-~g~~v 60 (60)
T smart00345 7 EDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPG-SGTFV 60 (60)
T ss_pred HHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-CeeEC
Confidence 467788999999999999999999999999 9999999999999988 89875
No 409
>PRK11414 colanic acid/biofilm transcriptional regulator; Provisional
Probab=98.57 E-value=6e-09 Score=95.07 Aligned_cols=53 Identities=8% Similarity=-0.155 Sum_probs=49.1
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.|+||+|||. ++||+.|||||++ |+..|+.+|+|+.+++ +|++|..
T Consensus 21 ~~~I~~g~l~pG~~L~e-~~La~~lgVSRtpVREAL~~L~~eGLV~~~~~-~g~~v~~ 76 (221)
T PRK11414 21 KHQLSIGALKPGARLIT-KNLAEQLGMSITPVREALLRLVSVNALSVAPA-QAFTVPE 76 (221)
T ss_pred HHHHHhCCCCCCCccCH-HHHHHHHCCCchhHHHHHHHHHHCCCEEecCC-CceeecC
Confidence 45789999999999996 7999999999999 9999999999999999 9999853
No 410
>TIGR03338 phnR_burk phosphonate utilization associated transcriptional regulator. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Polaromonas, Burkholderia, Ralstonia and Verminephrobacter.
Probab=98.57 E-value=4.9e-09 Score=95.07 Aligned_cols=52 Identities=10% Similarity=-0.119 Sum_probs=49.2
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
..|.+|.++||++| +.++||++|||||+| |+..|+.+|+|+.++| +|+||..
T Consensus 22 ~~I~~g~l~pG~~L-~e~~La~~lgVSRtpVReAL~~L~~eGlv~~~~~-~G~~V~~ 76 (212)
T TIGR03338 22 RAILSGELPPGAKL-NESDIAARLGVSRGPVREAFRALEEAGLVRNEKN-RGVFVRE 76 (212)
T ss_pred HHHHcCCCCCCCEe-cHHHHHHHhCCChHHHHHHHHHHHHCCCEEEecC-CCeEEec
Confidence 56899999999999 589999999999999 9999999999999999 9999965
No 411
>PRK11534 DNA-binding transcriptional regulator CsiR; Provisional
Probab=98.56 E-value=5.9e-09 Score=95.32 Aligned_cols=53 Identities=9% Similarity=-0.109 Sum_probs=49.7
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
-..|.+|.++||+|||. ++||++|||||++ |...|+.+|+|+.+++ +|+||..
T Consensus 17 ~~~I~~g~l~pG~~L~e-~eLae~lgVSRtpVREAL~~L~~eGlv~~~~~-~G~~V~~ 72 (224)
T PRK11534 17 KNDIIRGNFQPDEKLRM-SLLTSRYALGVGPLREALSQLVAERLVTVVNQ-KGYRVAS 72 (224)
T ss_pred HHHHHhCCCCCCCcCCH-HHHHHHHCCChHHHHHHHHHHHHCCCEEEeCC-CceEeCC
Confidence 46799999999999996 8999999999999 9999999999999999 9999965
No 412
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.25 E-value=6.8e-05 Score=69.72 Aligned_cols=214 Identities=15% Similarity=0.084 Sum_probs=114.7
Q ss_pred CHHhHhhhccC------CceEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCC-cccccccC
Q 012124 216 DPKVLESKLTE------KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLP 287 (470)
Q Consensus 216 d~~~l~~~l~~------~~~~i~l~~p~nPtG~-~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~-~~~~~~~~ 287 (470)
.++++|+.|.+ .+.+|++...|...|. ..|++..++|.+++++| ++..|+||+..+..-.|.- ....+.++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh-~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-GVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc-CeEEEeeeeecCCCccCceeeehhcCCC
Confidence 45667776632 2334555444777774 67999999999999999 9999999999763322210 00111122
Q ss_pred CCCCceEEEeccCcccccccceeeEEEcCHHHHH-HHHHHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012124 288 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 366 (470)
Q Consensus 288 ~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~~-~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (470)
. . .-+-+|||-| ..| ||..-+ +++. .-.++. .+++..+.-...+.+.++. -..+.+.+..+..
T Consensus 333 ~--P--pD~vTFSKK~-q~g---Gffh~~-~frpn~pYrif--NTWmGdP~k~lll~~vv~~-----I~~~~Ll~n~~~v 396 (484)
T KOG1405|consen 333 S--P--PDVVTFSKKF-QTG---GFFHDE-EFRPNEPYRIF--NTWMGDPSKNLLLEEVVQE-----IKREDLLNNVAHV 396 (484)
T ss_pred C--C--ccceehhhhh-hcC---ccccCc-ccCCCchHHHh--hhhcCChHHHHHHHHHHHH-----HhHHHHHHHHHHH
Confidence 1 1 1255799999 466 765433 2222 122222 2333333333333333332 1112233333334
Q ss_pred HHHHHHHhcc----CCCC-eecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012124 367 RDFLVKSFGE----LEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 441 (470)
Q Consensus 367 ~~~l~~~L~~----~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRl 441 (470)
-+.+.+.|.+ .||. .-... -|-|+.+++|... --+.++..+ +-+||.+--+ ....||+
T Consensus 397 G~~l~~gL~~Lq~~~p~~~~~~RG-rGTF~a~d~ps~~-----------~Rdk~i~~~-~~nGv~~GGC----g~~siRf 459 (484)
T KOG1405|consen 397 GKALLKGLLELQAKYPGKINNLRG-RGTFIAWDCPSGS-----------IRDKLILIA-RLNGVNLGGC----GDKSIRF 459 (484)
T ss_pred HHHHHHHHHHHHHhCchhhhcccc-cceEEEEeCCChH-----------HHHHHHHHH-HHcCceeccc----ccceeee
Confidence 4444444433 4552 22233 4555666998751 234555544 4458765221 2344555
Q ss_pred E--eecCHHHHHHHHHHHHHHHHh
Q 012124 442 S--YAASLTTLQAAVERIKKGLLT 463 (470)
Q Consensus 442 s--~~~~~~~i~~~l~~l~~~l~~ 463 (470)
- +...+.-.+-.+++|.+++..
T Consensus 460 RPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 460 RPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ccceeehhhhHHHHHHHHHHHhcc
Confidence 4 444777788888888887754
No 413
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.25 E-value=0.00028 Score=67.39 Aligned_cols=324 Identities=15% Similarity=0.180 Sum_probs=179.5
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhcC--C-----C-----CeEE-EcCCCCC
Q 012124 123 GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--P-----G-----DEVI-IPAPFWV 189 (470)
Q Consensus 123 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~~--~-----g-----d~Vl-v~~p~y~ 189 (470)
+...|.-.++..-..+.+-..+....|++...|.|+--.|+...++.+.-+--+ | | +-|+ ..+-++.
T Consensus 129 n~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHY 208 (510)
T KOG0629|consen 129 NMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHY 208 (510)
T ss_pred CCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchh
Confidence 455565445554555556666666678766668888888888877766554211 2 1 3344 4567888
Q ss_pred ChHHHHHHcC---CEEEEecCcCCCCCccCHHhHhhhccC-Cce----EEE-EcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012124 190 SYPEMARIAD---ATPVILPTRISENFLLDPKVLESKLTE-KSR----LLI-LCSPSNPTGSVYPKNLLDEIARIVAKHP 260 (470)
Q Consensus 190 ~~~~~~~~~g---~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~----~i~-l~~p~nPtG~~~s~~~~~~l~~~~~~~~ 260 (470)
+....+..+| -.++.|+.+..+ .+++++||+.|-. +.+ .++ .+......|..=+ +..++++|++|
T Consensus 209 Si~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~- 282 (510)
T KOG0629|consen 209 SIKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKH- 282 (510)
T ss_pred hHHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhc-
Confidence 8888888888 577888887544 5999999998832 222 222 2333456676666 88999999999
Q ss_pred CEEEEEeccccccc-cCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHH-HHHHHHHHhhhccC------
Q 012124 261 RLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQFTS------ 332 (470)
Q Consensus 261 ~~~iI~Dd~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~------ 332 (470)
++|+.+|.+|++.. .......-+..+.. --=+-.+.+|.+| ..+.++..+...+ ++.+.......+-+
T Consensus 283 ~lWmHvDAAwGGglLmS~k~R~kl~Gier---a~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Y 358 (510)
T KOG0629|consen 283 KLWMHVDAAWGGGLLMSRKHRHKLTGIER---ANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFY 358 (510)
T ss_pred CEEEEeecccccccccChhhHhhccCccc---cCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCcee
Confidence 99999999998722 22111111111211 1123456789998 7778887665543 33332211111100
Q ss_pred -----CCChHHHHH-------HHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCee-c--CCC-ceEEEeeecc
Q 012124 333 -----GASSISQKA-------GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-S--EPQ-GAFYLFIDFS 396 (470)
Q Consensus 333 -----~~~~~~q~a-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~--~~~-~g~~~~~~~~ 396 (470)
......|.. .-..++.- +....++..+.+-+..+++.+.+++-+|... . .|+ .++.+|..-+
T Consensus 359 dvS~DTgdK~iQCGRh~D~FKlWlmwkaK--G~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~ 436 (510)
T KOG0629|consen 359 DVSYDTGDKAIQCGRHVDVFKLWLMWKAK--GTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPP 436 (510)
T ss_pred ecccccccchhhcCccccHHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCch
Confidence 011111111 11111110 1234567777888899999999998766433 2 244 3455554332
Q ss_pred CccCCcccCCCCCC----CHHHHHHHHHHcCCEEEECCCCCC-CCCcEEEEeec---CHHHHHHHHHHHHHH
Q 012124 397 TYYGSEAEGFGKIE----NSESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAA---SLTTLQAAVERIKKG 460 (470)
Q Consensus 397 ~~~~~~~~~~~~~~----~~~~l~~~L~~~~gI~v~pg~~f~-~~~~iRls~~~---~~~~i~~~l~~l~~~ 460 (470)
...+.+.+ .+... -+..+-.+++++ |-....=.+.+ .++++|+.++. +.++++-.++.|+.+
T Consensus 437 ~lR~~~~~-~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 437 SLRGWQEN-PERDSRLVKVAPKIKERMMKK-GTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred HhccCccc-chhhhHHHhhCcHHHHHHHhc-cceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 22111110 00000 012333444554 43322111111 24689998775 677888887777654
No 414
>COG1802 GntR Transcriptional regulators [Transcription]
Probab=98.14 E-value=3e-07 Score=84.39 Aligned_cols=53 Identities=4% Similarity=-0.142 Sum_probs=49.9
Q ss_pred cccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 9 TSFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 9 ~~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
...|.+|.|+||+||. .++||++|||||++ |+.+|+++|+|+..++ +|+||..
T Consensus 26 r~~Il~g~l~pG~~l~-e~~La~~~gvSrtPVReAL~rL~~eGlv~~~p~-rG~~V~~ 81 (230)
T COG1802 26 REAILSGELAPGERLS-EEELAEELGVSRTPVREALRRLEAEGLVEIEPN-RGAFVAP 81 (230)
T ss_pred HHHHHhCCCCCCCCcc-HHHHHHHhCCCCccHHHHHHHHHHCCCeEecCC-CCCeeCC
Confidence 4579999999999998 99999999999999 9999999999999998 9999965
No 415
>PF14502 HTH_41: Helix-turn-helix domain
Probab=98.14 E-value=2.1e-07 Score=59.86 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=38.5
Q ss_pred CCCCCCCCCCCCccccCCcccc---ccccccccchhh--hhhcCCCccc
Q 012124 18 FGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLR--VMACSGVEEV 61 (470)
Q Consensus 18 ~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~--s~~g~sG~~V 61 (470)
++|+|||++-++++.++|||.| |+..|++.|-|. ++ |.-|||+
T Consensus 1 k~GdRi~tI~e~~~~~~vs~GtiQ~Alk~Le~~gaI~Le~r-Gh~GTfi 48 (48)
T PF14502_consen 1 KVGDRIPTISEYSEKFGVSRGTIQNALKFLEENGAIKLESR-GHLGTFI 48 (48)
T ss_pred CCCcccCCHHHHHHHhCcchhHHHHHHHHHHHCCcEEeeec-CcCcccC
Confidence 6899999999999999999999 999999999984 44 4488886
No 416
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00067 Score=65.60 Aligned_cols=320 Identities=13% Similarity=0.082 Sum_probs=168.4
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHHcCCCC--------CCCcEEEecChHHHHHHHHHHh------cCCC-----------C
Q 012124 125 TRYTPNAGTLELRSAICHKLKEENGLSY--------TPDQILVSNGAKQSILQAVLAV------CSPG-----------D 179 (470)
Q Consensus 125 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~--------~~~~i~it~g~~~al~~~~~~l------~~~g-----------d 179 (470)
+.+...+-..||..-+-+||.+..+++. ++.-|+-++.+-.-+-.++.+- ++.+ +
T Consensus 103 FtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~ 182 (511)
T KOG0628|consen 103 FTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLAR 182 (511)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhh
Confidence 3344556778999999999998887642 2224444444444343333331 1222 1
Q ss_pred -eEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCce-EE--EEcCCCCCcccCCCHHHHHHHHHH
Q 012124 180 -EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR-LL--ILCSPSNPTGSVYPKNLLDEIARI 255 (470)
Q Consensus 180 -~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~i--~l~~p~nPtG~~~s~~~~~~l~~~ 255 (470)
.+...+.++.+........|.+...++.+. +++++.+.|.+++.++.. .+ ++...+--|..+-+.+++.+|..+
T Consensus 183 lV~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 183 LVAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred heEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcch
Confidence 345678888899999999999999999864 889999999999965322 11 111122223344567789999999
Q ss_pred HHhCCCEEEEEeccccccccCCCCcccc-cccCC------C-CCceEEEeccCcccccccceee-EEEcCH-HHHHHHHH
Q 012124 256 VAKHPRLLVLSDEIYEHIIYAPATHTSF-ASLPG------M-WERTLTVNGFSKAFAMTGWRLG-YIAGPK-HFVAACNK 325 (470)
Q Consensus 256 ~~~~~~~~iI~Dd~~~~~~~~~~~~~~~-~~~~~------~-~~~~i~i~S~sK~~~~~G~r~G-~~~~~~-~~~~~l~~ 325 (470)
|+++ ++|+.+|.+|++-.+.-+....+ ..++. . ..-.++-..-|-.|==-|.++. +..+.+ .+..+...
T Consensus 261 c~~~-glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~ 339 (511)
T KOG0628|consen 261 CREE-GLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG 339 (511)
T ss_pred hhhc-CEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence 9999 99999999999644322111111 10100 0 0111111111111100111111 111111 11111110
Q ss_pred HhhhccCCCChHHHHHHHHHHhcC-------CCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCC-ceEEEeeeccC
Q 012124 326 IQSQFTSGASSISQKAGVAALGLG-------YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFST 397 (470)
Q Consensus 326 ~~~~~~~~~~~~~q~a~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~ 397 (470)
. ...-..-|..+..-++.- .++-+-+++..+..-+..+.+.+.+.+-+.+++..+. -|+ +++++.+
T Consensus 340 ~-----~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~ 413 (511)
T KOG0628|consen 340 S-----APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGL-VCFRLKG 413 (511)
T ss_pred c-----CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccce-eEEeecC
Confidence 0 000111111111111110 0011112222222222333444444443456654443 366 5667654
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhh
Q 012124 398 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTL 464 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~l~~~ 464 (470)
. .+..+.+.+++-....|.+.|.. +...-.+|++++. ++++++++-+.|.+....+
T Consensus 414 ~----------N~~ne~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 414 D----------NEINEALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred C----------cHHHHHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 2 12567888888877788888854 3333468999886 7789999988888877653
No 417
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.84 E-value=0.0041 Score=57.11 Aligned_cols=333 Identities=12% Similarity=0.089 Sum_probs=190.7
Q ss_pred cCCCeEEccCCCCCCCChHHHHHHHHHHHHc--CCCCCCCCc-------CcHHHHHHHHHHHHHHcCCCCCCCcEEEecC
Q 012124 92 AGVSVIRLAAGEPDFDTPVLIAEAGINAIRE--GFTRYTPNA-------GTLELRSAICHKLKEENGLSYTPDQILVSNG 162 (470)
Q Consensus 92 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~--~~~~y~~~~-------g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g 162 (470)
+.++.|.|+.+...+ .|....+.+.+.+.. ...-|+... +.......++.. -| ...++|.+.++
T Consensus 64 ~d~~~iYlcGNSLGL-mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~i----VG--A~e~EvavmNs 136 (465)
T KOG3846|consen 64 DDKPVIYLCGNSLGL-MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPI----VG--AQENEVAVMNS 136 (465)
T ss_pred CCCCeEEEecccccc-CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhh----cc--CCchhhhhHhh
Confidence 445677777666554 355555555555543 122233222 223333333333 34 47789999999
Q ss_pred hHHHHHHHHHHhcCCC---CeEEEcCCCCCChHH----HHHHcCCEE----EEecCcCCCCCccCHHhHhhhccC---Cc
Q 012124 163 AKQSILQAVLAVCSPG---DEVIIPAPFWVSYPE----MARIADATP----VILPTRISENFLLDPKVLESKLTE---KS 228 (470)
Q Consensus 163 ~~~al~~~~~~l~~~g---d~Vlv~~p~y~~~~~----~~~~~g~~~----~~v~~~~~~~~~~d~~~l~~~l~~---~~ 228 (470)
-+-.+..++.+|.+|- -+|+++.-.||+-.- .++..|..+ +.+.- .++...+..+++.+.|.. ..
T Consensus 137 LTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP-REGEetlRteDILd~IEkngDei 215 (465)
T KOG3846|consen 137 LTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP-REGEETLRTEDILDTIEKNGDEI 215 (465)
T ss_pred hhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc-cccccchhHHHHHHHHHhcCCeE
Confidence 9999999999998775 479999988887443 345566653 22222 245556788888888853 34
Q ss_pred eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccc
Q 012124 229 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 308 (470)
Q Consensus 229 ~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ 308 (470)
.+|++...|+-||+.++ +.+|-. |.+.+|++|=.|-+++. +. .++.-. +++..+.+..--|-++ +|.
T Consensus 216 A~v~fSGvqyYTGQ~Fd---i~aIT~-Agq~kgc~VGfDLAHAv----gN--VpL~LH--dWgVDFACWCSYKYln-aGa 282 (465)
T KOG3846|consen 216 ALVCFSGVQYYTGQYFD---IGAITF-AGQFKGCLVGFDLAHAV----GN--VPLQLH--DWGVDFACWCSYKYLN-AGA 282 (465)
T ss_pred EEEEeecceeecccccc---hhhhhh-cccCCCcEechhhhhhh----cC--CceEEe--ecCCceEEEeeecccc-cCC
Confidence 45566778999999999 777774 44444899988888874 22 222211 2566677776667663 321
Q ss_pred -eeeEEEcCHHHH----HHHH---------------------HHhhhccCCCChHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012124 309 -RLGYIAGPKHFV----AACN---------------------KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 362 (470)
Q Consensus 309 -r~G~~~~~~~~~----~~l~---------------------~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 362 (470)
.+|-+....+.. .++. ....+...+++.+...++...|+.- .+-.++++|++
T Consensus 283 GgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F--~q~~~~~lRkr 360 (465)
T KOG3846|consen 283 GGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELF--AQFNINELRKR 360 (465)
T ss_pred CccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHH--HHhhHHHHhhh
Confidence 244444433322 1221 1111122345555555555544420 11223444433
Q ss_pred ---HHHHHHHHHHHhccCC--------CCeecCC----CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEE
Q 012124 363 ---FRERRDFLVKSFGELE--------GVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 427 (470)
Q Consensus 363 ---~~~~~~~l~~~L~~~~--------g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v 427 (470)
+....+++.+...... -+.+..| +.|..+-+.+.. +...+.+.|-++ |+..
T Consensus 361 S~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-------------p~~~vfqeL~kr-Gv~~ 426 (465)
T KOG3846|consen 361 SLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-------------PTPKVFQELHKR-GVIG 426 (465)
T ss_pred hhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-------------CchHHHHHHHHc-Ceec
Confidence 3333444444443211 1233333 235555555543 345777887655 8765
Q ss_pred ECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhC
Q 012124 428 VPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 428 ~pg~~f~~~~~iRls~~~---~~~~i~~~l~~l~~~l~~~~ 465 (470)
-. ..++.||++... +-.++..++..|.+++..+.
T Consensus 427 Dk----R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 427 DK----RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred cc----cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 32 246889999775 77899999999999887654
No 418
>cd07377 WHTH_GntR Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators. This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is
Probab=97.82 E-value=1.3e-06 Score=62.78 Aligned_cols=51 Identities=6% Similarity=-0.114 Sum_probs=46.2
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
..|..+.+.+|.++|+.++||+.++||++| ++..|+++|+|+...+ .|+++
T Consensus 12 ~~i~~~~~~~~~~~~~~~~la~~~~is~~~v~~~l~~L~~~G~i~~~~~-~~~~l 65 (66)
T cd07377 12 EAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPG-RGTFV 65 (66)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCC-CeEEe
Confidence 456778889999999999999999999999 9999999999998877 78776
No 419
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.70 E-value=0.00043 Score=61.94 Aligned_cols=298 Identities=17% Similarity=0.205 Sum_probs=148.1
Q ss_pred HHcCCCCCCCcEEEecChHHHHHHHHHHhc--CCCCe-EEEcCCCCCChHHHHHHcCCEEEEecCcCCC-CCccCHHhHh
Q 012124 146 EENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDE-VIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLE 221 (470)
Q Consensus 146 ~~~g~~~~~~~i~it~g~~~al~~~~~~l~--~~gd~-Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~ 221 (470)
...|+..-.+.+++---+-..+.+.+..+. .|..+ |+-..-.--+....+-.+|.+++-+.--.++ ...-|++.++
T Consensus 68 ~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~ 147 (432)
T KOG3843|consen 68 HLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVE 147 (432)
T ss_pred HHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHH
Confidence 345666555666654333334555665553 34433 3222222222333445688887766543333 2334778888
Q ss_pred hhccC-CceEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCccccccc---CCCCCceEEE
Q 012124 222 SKLTE-KSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL---PGMWERTLTV 296 (470)
Q Consensus 222 ~~l~~-~~~~i-~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~---~~~~~~~i~i 296 (470)
+.+.+ ...+| ++.+... .=..-+++++++|+.+|..| ++.-|+..+|+--. ...+..+ .....-..++
T Consensus 148 ~~iee~g~dcilci~stts-cfapr~pd~leaiaaica~~-diphivnnayglqs-----ee~i~~iaa~~~~grida~v 220 (432)
T KOG3843|consen 148 AIIEELGEDCILCIHSTTS-CFAPRSPDNLEAIAAICAAH-DIPHIVNNAYGLQS-----EECIHKIAAAAECGRIDAFV 220 (432)
T ss_pred HHHHHhCCceEEEEeeccc-ccCCCCCchHHHHHHHHHcc-Cchhhhccccccch-----HHHHHHHHHHhhhccHHHHH
Confidence 87754 33333 2322111 11233778899999999999 99999999997411 1122211 1112223578
Q ss_pred eccCcccccccceeeEEE--cCHHHHHHHHHHhhhccCCCChHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHHHHHH
Q 012124 297 NGFSKAFAMTGWRLGYIA--GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA-GGEVVSKMVKAFRERRDFLVKS 373 (470)
Q Consensus 297 ~S~sK~~~~~G~r~G~~~--~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 373 (470)
.|+.|.|-.| .. |.++ ....+++.+.+.........|+. ..+..+|..|.. ..+.+.+..+.+...++.+.+.
T Consensus 221 qsldknf~vp-vg-gaiia~fk~n~iq~iak~ypgrasa~ps~--dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ 296 (432)
T KOG3843|consen 221 QSLDKNFMVP-VG-GAIIAAFKDNFIQEIAKMYPGRASASPSL--DLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKF 296 (432)
T ss_pred HHhhhcceee-cc-hhHhhHhHHHHHHHHHHhCCCccccCccH--HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999533 21 3444 35667877777654444334443 334444444321 1233344444444444444433
Q ss_pred hccCCCCeecCCCceEEEeeec---cCccCCcccCCCCCCCH-HHHHHHHHHcCCE---EEECCCC---------C---C
Q 012124 374 FGELEGVKMSEPQGAFYLFIDF---STYYGSEAEGFGKIENS-ESLCRYLLDKAQV---ALVPGDA---------F---G 434 (470)
Q Consensus 374 L~~~~g~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~-~~l~~~L~~~~gI---~v~pg~~---------f---~ 434 (470)
-+.+...-...|..-+.+...+ ++.. ..+ ..|-..|..+ || .|.|... | +
T Consensus 297 ae~~~e~l~~~p~n~is~amtl~ti~~~k----------~kavt~~gsilfak-~isgarvv~~~q~kttieg~ef~~f~ 365 (432)
T KOG3843|consen 297 AEAIGECLLETPENEISLAMTLKTIDEAK----------DKAVTLFGSILFAK-GISGARVVPLGQMKTTIEGCEFIGFG 365 (432)
T ss_pred HHHhhhhhhcCCCchhhhhhhhccCChHH----------hhHHHHHHHHHHhc-cccCceEeeccccceeeeceEEeccc
Confidence 3333222233344433333333 2210 011 2233344444 44 3333222 1 1
Q ss_pred C------CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012124 435 D------DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 465 (470)
Q Consensus 435 ~------~~~iRls~~~--~~~~i~~~l~~l~~~l~~~~ 465 (470)
. -+|+-...+. +..++++++.||...+..++
T Consensus 366 sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ 404 (432)
T KOG3843|consen 366 SHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFR 404 (432)
T ss_pred cccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHH
Confidence 1 1244444333 77899999999988876543
No 420
>PLN02672 methionine S-methyltransferase
Probab=97.26 E-value=0.013 Score=64.45 Aligned_cols=230 Identities=13% Similarity=0.169 Sum_probs=141.6
Q ss_pred eEEccCCCCCCCC-hHHHHHHHHHHHHc-CCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHH
Q 012124 96 VIRLAAGEPDFDT-PVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 173 (470)
Q Consensus 96 ~i~l~~g~~~~~~-~~~~~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~ 173 (470)
-+||+..+-.... .-.....+...+.. ..+-|.++.|...+|..|+.|++..++++.++++|+|.++-..|++.+++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1082)
T PLN02672 389 SLDLSFEDESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRL 468 (1082)
T ss_pred hccccccccccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHh
Confidence 4555544432221 11234455555544 467798999999999999999999999999999999999999999888876
Q ss_pred h------cCCCCeEEEcCCCCCChHHHHHHcC----------CEEEEecCcCCCCCccCHHhHhhhccC-CceEEEEcCC
Q 012124 174 V------CSPGDEVIIPAPFWVSYPEMARIAD----------ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSP 236 (470)
Q Consensus 174 l------~~~gd~Vlv~~p~y~~~~~~~~~~g----------~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~i~l~~p 236 (470)
+ ++.+.+-.++. .|...+...| +.++.-|. .-|.+.+.++. ++++++..-.
T Consensus 469 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 536 (1082)
T PLN02672 469 FSPRLAIVDEHLTRWLPK----KWLTSLAIENATSDSKSDDVITVIEAPR--------QSDLVIELIKKLKPQVVVTGMA 536 (1082)
T ss_pred hChHHHhhhhhhhccCCH----HHHhHhhhhcccccCccCCeEEEEeCCC--------cchHHHHHHHhCCCeEEEEecc
Confidence 5 23332222211 1222222222 12222221 11233444433 6777765443
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCEEEEEecc-ccccccCCCCcccccccC--CCCCceEEEeccCcccccccceeeEE
Q 012124 237 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI-YEHIIYAPATHTSFASLP--GMWERTLTVNGFSKAFAMTGWRLGYI 313 (470)
Q Consensus 237 ~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~-~~~~~~~~~~~~~~~~~~--~~~~~~i~i~S~sK~~~~~G~r~G~~ 313 (470)
+. -..+....+.|++.+++. |.+++.|.. |-++.-......-+..+. +...+..++..+-|.-=.+.+-+.++
T Consensus 537 ~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (1082)
T PLN02672 537 DF---EMRTSTAFEHLLNVTAEI-GARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFV 612 (1082)
T ss_pred ch---hhhhHHHHHHHHHHHHhh-CcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEE
Confidence 32 223445588999999999 999999987 334332222222222221 12345566667777765689999999
Q ss_pred Ec-CHHHHHHHHHHhhhccCCCChHHHHH
Q 012124 314 AG-PKHFVAACNKIQSQFTSGASSISQKA 341 (470)
Q Consensus 314 ~~-~~~~~~~l~~~~~~~~~~~~~~~q~a 341 (470)
+. +..+...+.+........++.+.|.-
T Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 613 ISENEAVLKALSKTGEVLEGRTAIISQFY 641 (1082)
T ss_pred ecCcHHHHHHHHHHHHhhccchHHHHHHH
Confidence 85 56677888777766666777777754
No 421
>PRK11014 transcriptional repressor NsrR; Provisional
Probab=97.07 E-value=4.5e-05 Score=64.03 Aligned_cols=46 Identities=7% Similarity=-0.096 Sum_probs=41.4
Q ss_pred ccccCcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCC
Q 012124 10 SFISNPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSG 57 (470)
Q Consensus 10 ~~i~~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~s 57 (470)
.+|..+.+.||. ++|.++||+.++||+++ |+.+|..+|+|++++| +
T Consensus 13 ~~i~la~~~~g~-~~s~~~ia~~~~is~~~vrk~l~~L~~~Glv~s~~G-~ 61 (141)
T PRK11014 13 ALIYMASLPEGR-MTSISEVTEVYGVSRNHMVKIINQLSRAGYVTAVRG-K 61 (141)
T ss_pred HHHHHhcCCCCC-ccCHHHHHHHHCcCHHHHHHHHHHHHhCCEEEEecC-C
Confidence 356678888885 78999999999999999 9999999999999998 5
No 422
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.85 E-value=0.23 Score=50.67 Aligned_cols=302 Identities=17% Similarity=0.193 Sum_probs=165.7
Q ss_pred cCcHHHHHHHHHHHHHHcCCCCCCCcEEEe--cChH---HHHHHHHHH-hcCCC----CeEEEcCCCCCChHHHHHHcCC
Q 012124 131 AGTLELRSAICHKLKEENGLSYTPDQILVS--NGAK---QSILQAVLA-VCSPG----DEVIIPAPFWVSYPEMARIADA 200 (470)
Q Consensus 131 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~it--~g~~---~al~~~~~~-l~~~g----d~Vlv~~p~y~~~~~~~~~~g~ 200 (470)
+|+.++-..+..+|..--|. |++.+. +|++ .+|. ++++ +...| ..-+++...+......+..+|.
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~----D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGF----DSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred hhHHHHHHHHHHHhheeecc----cceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 78889999999888765443 455553 3333 2344 3333 33344 2346677777666677889999
Q ss_pred EEEEecCcCCCCCccCHHhHhhhccC---CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCC
Q 012124 201 TPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 277 (470)
Q Consensus 201 ~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~ 277 (470)
++++|..+..++ +|..+|.+...+ +-.++.++.|+.- |+ =++.+++++++.++| |--|..|.+.-.-.
T Consensus 653 kvvpV~~~~~G~--id~~dLk~kaekh~~~Laa~MvTYPST~-Gv--fE~~i~d~cd~iHeh-GGQVYlDGANMNAq--- 723 (1001)
T KOG2040|consen 653 KVVPVGCDANGN--IDMVDLKAKAEKHKDNLAALMVTYPSTH-GV--FEEGIDDICDIIHEH-GGQVYLDGANMNAQ--- 723 (1001)
T ss_pred EEEEeeccCCCC--ccHHHHHHHHHHhhhhhheeEEeccccc-cc--ccccHHHHHHHHHhc-CCEEEecCCCccce---
Confidence 999999986655 999999887743 4456677777531 22 234489999999999 88999897753211
Q ss_pred CCcccccccCCCCCceEEEeccCcccccc----cceeeEEEcCHHHHHHHHHHh-----------hhccCC----CChHH
Q 012124 278 ATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGPKHFVAACNKIQ-----------SQFTSG----ASSIS 338 (470)
Q Consensus 278 ~~~~~~~~~~~~~~~~i~i~S~sK~~~~~----G~r~G~~~~~~~~~~~l~~~~-----------~~~~~~----~~~~~ 338 (470)
..+.. +++.+..+.=--+.|+|++| |-.+|=+...++++.-+-... ...+.+ .+...
T Consensus 724 ---VGlc~-pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~I 799 (1001)
T KOG2040|consen 724 ---VGLCR-PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALI 799 (1001)
T ss_pred ---ecccC-CccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCccee
Confidence 11111 11122223333466777543 333444444444433321100 000000 11111
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeecCCCc--eEEEeeeccCccCCcccCCCCCCCHHHHH
Q 012124 339 QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG--AFYLFIDFSTYYGSEAEGFGKIENSESLC 416 (470)
Q Consensus 339 q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (470)
.-+..++++.- +...+++..+.-.-+.++|.+.|+..=.+-+....+ +.=+.+++.+.- . ....++.+++
T Consensus 800 LpISwaYikmM--G~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK-----~-~agieavDvA 871 (1001)
T KOG2040|consen 800 LPISWAYIKMM--GSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFK-----K-TAGIEAVDVA 871 (1001)
T ss_pred ehhHHHHHHHh--cccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhc-----c-ccCCcHHHHH
Confidence 12223333321 123344444445557788888888741232322222 111234543321 0 0112678899
Q ss_pred HHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012124 417 RYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 460 (470)
Q Consensus 417 ~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~ 460 (470)
++|. .+|+.. |-..|-..+.+-|-.+. +.++++.+++++-.+
T Consensus 872 KRL~-DYgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSI 915 (1001)
T KOG2040|consen 872 KRLM-DYGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISI 915 (1001)
T ss_pred HHHH-hccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHH
Confidence 9986 567643 33445556777777665 557888887776444
No 423
>TIGR02787 codY_Gpos GTP-sensing transcriptional pleiotropic repressor CodY. This model represents the full length of CodY, a pleiotropic repressor in Bacillus subtilis and other Firmicutes (low-GC Gram-positive bacteria) that responds to intracellular levels of GTP and branched chain amino acids. The C-terminal helix-turn-helix DNA-binding region is modeled by pfam08222 in Pfam.
Probab=96.57 E-value=0.00023 Score=63.23 Aligned_cols=41 Identities=5% Similarity=-0.164 Sum_probs=36.9
Q ss_pred CCCCCCCCccccCCcccc---ccccccccchhhhhh-cCCCccccc
Q 012124 22 KIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMA-CSGVEEVQV 63 (470)
Q Consensus 22 ~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~-g~sG~~V~~ 63 (470)
|+| .++||+++||||++ |...|++.|+|++++ |.+||||..
T Consensus 198 rls-e~eLAerlGVSRs~ireAlrkLE~aGvIe~r~LG~kGt~V~~ 242 (251)
T TIGR02787 198 LLV-ASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYIKV 242 (251)
T ss_pred ccc-HHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCCccEeCC
Confidence 554 89999999999999 999999999999999 745999965
No 424
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.40 E-value=0.77 Score=42.22 Aligned_cols=329 Identities=12% Similarity=0.096 Sum_probs=174.8
Q ss_pred CeEEccCCCCCCCChHHHHHHHHHHHHc-CC-------CCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHH
Q 012124 95 SVIRLAAGEPDFDTPVLIAEAGINAIRE-GF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 166 (470)
Q Consensus 95 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~-~~-------~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~a 166 (470)
.+++|+.|-.. .|..+...+.+.+-+ .. ... .+.....+.+.-...+++.++++-+-+=+++..|++.-
T Consensus 7 ~vvnFaaGPAk--lp~~VL~e~qkdl~n~~g~GisV~EmSH-Rsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~q 83 (370)
T KOG2790|consen 7 RVVNFAAGPAK--LPESVLLEAQKDLLNFNGSGISVMEMSH-RSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQ 83 (370)
T ss_pred ceeecCCCccc--CCHHHHHHHHHHhhccCCCcceEEEecc-cchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCccc
Confidence 46788776443 354444444443322 11 111 12333455555556666777776444455667778877
Q ss_pred HHHHHHHhc--CCC---CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCC-CCccCHHhHhhhccCCceEEEEcCCCCCc
Q 012124 167 ILQAVLAVC--SPG---DEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCSPSNPT 240 (470)
Q Consensus 167 l~~~~~~l~--~~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~i~l~~p~nPt 240 (470)
+..+...|+ +.| |-|+.-..+--.+..+-+......+..+..... +-.+|.+.++. +++.+.+++|.--..-
T Consensus 84 FaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVH 161 (370)
T KOG2790|consen 84 FAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCANETVH 161 (370)
T ss_pred ccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEecCceee
Confidence 777776665 444 566655544333444434333334444443221 22356666654 3455577777655455
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCcccccccceeeEEEcCHHHH
Q 012124 241 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 320 (470)
Q Consensus 241 G~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~r~G~~~~~~~~~ 320 (470)
|+-++.-- .-.-+ +.++|.|-.-..+. .+..+. ..-+++...-|.+|..| +-.++..++++
T Consensus 162 GVEf~~~P------~~~~~-~~vlVaDmSSnflS----rpvDvs------k~gvi~aGAQKN~G~aG--~Tvvivr~dll 222 (370)
T KOG2790|consen 162 GVEFDFIP------VNDPK-GAVLVADMSSNFLS----RPVDVS------KFGVIFAGAQKNVGPAG--VTVVIVRKDLL 222 (370)
T ss_pred ceecCCCC------CCCCC-CceEEEecccchhc----CCccch------hcceEEeccccccCccc--cEEEEEehhhh
Confidence 66554110 00123 77778776544321 112222 22355666889998777 45566677766
Q ss_pred HHHHHHh-----------hhccC-CCChHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCeec--CC-
Q 012124 321 AACNKIQ-----------SQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EP- 385 (470)
Q Consensus 321 ~~l~~~~-----------~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~- 385 (470)
.....+. ...-+ .+|.++.++.--.+++-. ....+..+.+.-.++.+.+++.+.+..|+-.. .|
T Consensus 223 g~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il-~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~ 301 (370)
T KOG2790|consen 223 GNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWIL-EKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPS 301 (370)
T ss_pred cccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchh
Confidence 5432211 01111 244444444333332210 02346677777888999999999876564221 11
Q ss_pred -CceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012124 386 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 462 (470)
Q Consensus 386 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l~~l~~~l~ 462 (470)
.+-|.+.+++.+. +-..+|.....+++ ..-.-|. ..-|.+|-|+-. +-++.++.++-++++.+
T Consensus 302 ~RS~MNV~Fri~~d-----------~Le~eFLkeA~~~~-mv~LKGh--RSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 302 VRSRMNVPFRIEKD-----------ELEAEFLKEAAKEH-MVQLKGH--RSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred hhhhcccceeecch-----------HHHHHHHHHHHHhh-hhccccc--cccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 3346666666532 13456666655553 3322332 234789999875 77887777777776654
No 425
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.36 E-value=0.78 Score=46.97 Aligned_cols=308 Identities=15% Similarity=0.194 Sum_probs=151.5
Q ss_pred CCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----cCcHHHHHHHHHHHHHHcCCCCCCCcEEEecChHHHHHHHHHHhc
Q 012124 101 AGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 175 (470)
Q Consensus 101 ~g~~~~~~~~~~~~a~~~~~~~~~~~y~~~-----~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~g~~~al~~~~~~l~ 175 (470)
+|.-+...|+.+.+-+.+.. ....+|+|. +|-.|-.--....+...-|.++.... ++--|+..+-..++..-.
T Consensus 125 mGYyn~~vP~~I~RNilenp-~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNAS-LLDEgTAaaEAm~l~~~~ 202 (1001)
T KOG2040|consen 125 MGYYNTHVPAVILRNILENP-GWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANAS-LLDEGTAAAEAMALCNRI 202 (1001)
T ss_pred cccccccCcHHHHHHhhhCC-cceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchh-hhccchhHHHHHHHHHhh
Confidence 33334344555554433321 124667664 33333222223333344566544322 222333322222222224
Q ss_pred CCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHH
Q 012124 176 SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 251 (470)
Q Consensus 176 ~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~ 251 (470)
.++.++++..-+|+....+++. .|.+++.. |++....- .++...+++-.|.. -|.+.+ ..+
T Consensus 203 ~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~~s-~~~v~gvlvQYP~t-~G~i~d---~~e 267 (1001)
T KOG2040|consen 203 NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEADYS-SKDVSGVLVQYPDT-EGSVLD---FDE 267 (1001)
T ss_pred cccceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhhcc-ccceeEEEEEcCCC-CCcccC---HHH
Confidence 5677899999999999888764 33332222 22222221 22455666655543 577778 677
Q ss_pred HHHHHHhCCCEEEEEe-ccccccccCCCCcccccccCCCCCceEEEeccCccccc----ccceeeEEEcCHHHHHH----
Q 012124 252 IARIVAKHPRLLVLSD-EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAA---- 322 (470)
Q Consensus 252 l~~~~~~~~~~~iI~D-d~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~~~----~G~r~G~~~~~~~~~~~---- 322 (470)
+++.+++. +.+++.- |-.+ ..+..-+++.+..|.+||-- -||+ .|--.||+.+..++.+.
T Consensus 268 l~~~a~~~-~s~vv~atDLLa---------LtiLrpPgefGaDIavGSsQ-RFGVPlGYGGPHAaFfAv~~~l~R~mPGR 336 (1001)
T KOG2040|consen 268 LVELAHAN-GSLVVMATDLLA---------LTILRPPGEFGADIAVGSSQ-RFGVPLGYGGPHAAFFAVSESLVRMMPGR 336 (1001)
T ss_pred HHHHhhcc-CceEEEeehhhH---------HHccCChhhcCceeeecccc-ccCccccCCCchHHHHHHHHHHHhhCCCc
Confidence 78888888 7766532 2111 12222233456678888743 2332 22222233222222211
Q ss_pred -----------------H-------HHHhhhccCCCChHHH--HHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 012124 323 -----------------C-------NKIQSQFTSGASSISQ--KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 376 (470)
Q Consensus 323 -----------------l-------~~~~~~~~~~~~~~~q--~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 376 (470)
+ ++-+...+.|+..... .++..++=+ +...++++.++.....-.+...|++
T Consensus 337 iiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYH---Gp~gL~~IArrvh~~T~~l~~~l~~ 413 (1001)
T KOG2040|consen 337 IIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYH---GPHGLKEIARRVHNLTLILAEGLKN 413 (1001)
T ss_pred eEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhc---CcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1112222222221111 111122223 3566788888888888888888887
Q ss_pred CCCCeecCCCceEEEeeeccCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHH
Q 012124 377 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAV 454 (470)
Q Consensus 377 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~v~pg~~f~~~~~iRls~~~--~~~~i~~~l 454 (470)
. |-++... .||=.+++.=. .+.+++..+.+++ +|-++- ..++.+-+++-. ++++++..+
T Consensus 414 a-ghel~~k--~fFDTLkI~~~-----------~s~~~~l~rA~~~-~iNlr~----~ed~tigvslDETv~~~DvddLl 474 (1001)
T KOG2040|consen 414 A-GHELQHK--PFFDTLKIRCG-----------CSAEEVLDRAAKR-QINLRL----VEDGTIGVSLDETVTEKDVDDLL 474 (1001)
T ss_pred c-chhhccc--cccceEEEEec-----------CcHHHHHHHHHhh-cCceEE----eecCceEEeecccccHHHHHHHH
Confidence 6 5444322 25433333211 1466777766555 454332 246778888875 778888888
Q ss_pred HHHH
Q 012124 455 ERIK 458 (470)
Q Consensus 455 ~~l~ 458 (470)
..+.
T Consensus 475 ~vf~ 478 (1001)
T KOG2040|consen 475 WVFN 478 (1001)
T ss_pred HHHc
Confidence 7664
No 426
>PF13730 HTH_36: Helix-turn-helix domain
Probab=95.81 E-value=0.00072 Score=46.44 Aligned_cols=33 Identities=6% Similarity=-0.007 Sum_probs=29.6
Q ss_pred CCCCCCCCCCCCccccCCcccc---ccccccccchh
Q 012124 18 FGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVL 50 (470)
Q Consensus 18 ~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i 50 (470)
..|.--||++.||+.+|+|++| +.++|++.|||
T Consensus 20 ~~~~~~pS~~~la~~~g~s~~Tv~~~i~~L~~~G~I 55 (55)
T PF13730_consen 20 KNGGCFPSQETLAKDLGVSRRTVQRAIKELEEKGLI 55 (55)
T ss_pred CCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCcCC
Confidence 3444789999999999999999 99999999997
No 427
>TIGR01610 phage_O_Nterm phage replication protein O, N-terminal domain. This model represents the N-terminal region of the phage lambda replication protein O and homologous regions of other phage proteins.
Probab=95.46 E-value=0.0012 Score=50.98 Aligned_cols=41 Identities=7% Similarity=-0.206 Sum_probs=36.1
Q ss_pred CCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 20 HSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 20 g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
...-+|+++||+.+|+||.| +.++|+++|+|+...| +|+|-
T Consensus 44 ~~~~is~~eLa~~~g~sr~tVsr~L~~Le~~GlI~r~~~-~~~~~ 87 (95)
T TIGR01610 44 KQDRVTATVIAELTGLSRTHVSDAIKSLARRRIIFRQGM-MGIVG 87 (95)
T ss_pred cCCccCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeeecC-Cceee
Confidence 35567799999999999999 9999999999998877 88873
No 428
>smart00529 HTH_DTXR Helix-turn-helix diphteria tox regulatory element. iron dependent repressor
Probab=94.77 E-value=0.0031 Score=48.93 Aligned_cols=37 Identities=0% Similarity=-0.217 Sum_probs=33.3
Q ss_pred CCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 26 QIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 26 ~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
+++||+.++||++| +++.|+++|||+..++ +++++++
T Consensus 2 ~~ela~~l~is~stvs~~l~~L~~~glI~r~~~-~~~~lT~ 41 (96)
T smart00529 2 TSEIAERLNVSPPTVTQMLKKLEKDGLVEYEPY-RGITLTE 41 (96)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHCCCEEEcCC-CceEech
Confidence 47899999999999 9999999999999987 7877765
No 429
>PRK12423 LexA repressor; Provisional
Probab=94.65 E-value=0.0029 Score=56.58 Aligned_cols=39 Identities=8% Similarity=0.043 Sum_probs=34.0
Q ss_pred CCCCCCccccC-Ccccc---ccccccccchhhhhhcC-CCcccc
Q 012124 24 PAQIPGSVSFP-SRYLH---NFNLNNDRRVLRVMACS-GVEEVQ 62 (470)
Q Consensus 24 Ps~R~La~~l~-vs~~T---Ay~~L~~~G~i~s~~g~-sG~~V~ 62 (470)
||.|+||+.+| +|++| +.+.|+++|+|+..+++ +|++|.
T Consensus 26 Ps~~eia~~~g~~s~~~v~~~l~~L~~~G~l~~~~~~~~~~~v~ 69 (202)
T PRK12423 26 PSLAEIAQAFGFASRSVARKHVQALAEAGLIEVVPNQARGIRLP 69 (202)
T ss_pred CCHHHHHHHhCCCChHHHHHHHHHHHHCCCEEecCCCcceeeec
Confidence 99999999999 59998 99999999999998752 466663
No 430
>PF01726 LexA_DNA_bind: LexA DNA binding domain; InterPro: IPR006199 This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins in bacteria. The aligned region contains a variant form of the helix-turn-helix DNA binding motif []. This domain usually at the N terminus is found associated with IPR006198 from INTERPRO the auto-proteolytic domain of LexA 3.4.21.88 from EC.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1LEA_A 1JHH_A 3JSP_A 1JHF_A 3JSO_B 1LEB_A 3K2Z_A.
Probab=93.35 E-value=0.0049 Score=43.70 Aligned_cols=33 Identities=6% Similarity=-0.043 Sum_probs=26.9
Q ss_pred CCCCCCCccccCCc-ccc---ccccccccchhhhhhc
Q 012124 23 IPAQIPGSVSFPSR-YLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 23 lPs~R~La~~l~vs-~~T---Ay~~L~~~G~i~s~~g 55 (470)
=||.|++|+.+|++ .+| -.+.|++.|||...++
T Consensus 25 ~Pt~rEIa~~~g~~S~~tv~~~L~~Le~kG~I~r~~~ 61 (65)
T PF01726_consen 25 PPTVREIAEALGLKSTSTVQRHLKALERKGYIRRDPG 61 (65)
T ss_dssp ---HHHHHHHHTSSSHHHHHHHHHHHHHTTSEEEGCC
T ss_pred CCCHHHHHHHhCCCChHHHHHHHHHHHHCcCccCCCC
Confidence 38999999999997 666 8899999999988766
No 431
>PF08279 HTH_11: HTH domain; InterPro: IPR013196 Winged helix DNA-binding proteins share a related winged helix-turn-helix DNA-binding motif, where the "wings", or loops, are small beta-sheets. The winged helix motif consists of two wings (W1, W2), three alpha helices (H1, H2, H3) and three beta-sheets (S1, S2, S3) arranged in the order H1-S1-H2-H3-S2-W1-S3-W2 []. The DNA-recognition helix makes sequence-specific DNA contacts with the major groove of DNA, while the wings make different DNA contacts, often with the minor groove or the backbone of DNA. Several winged-helix proteins display an exposed patch of hydrophobic residues thought to mediate protein-protein interactions. This entry represents a subset of the winged helix domain superfamily which is predominantly found in bacterial proteins, though there are also some archaeal and eukaryotic examples. This domain is commonly found in the biotin (vitamin H) repressor protein BirA which regulates transcription of the biotin operon []. It is also found in other proteins including regulators of amino acid biosynthsis such as LysM [], and regulators of carbohydrate metabolisms such as LicR and FrvR [, ].; PDB: 1HXD_B 2EWN_B 1BIA_A 1BIB_A 1J5Y_A 3V7S_A 3V7C_A 3RKW_A 3RIR_A 3RKX_A ....
Probab=92.74 E-value=0.0052 Score=42.09 Aligned_cols=36 Identities=0% Similarity=-0.243 Sum_probs=29.5
Q ss_pred CCCCCCccccCCcccc---ccccccccc-hhhhhhcCCCcc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRR-VLRVMACSGVEE 60 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G-~i~s~~g~sG~~ 60 (470)
=|..+||+.|+||+.| -.+.|.+.| .|++.+| .||+
T Consensus 16 it~~eLa~~l~vS~rTi~~~i~~L~~~~~~I~~~~~-~GY~ 55 (55)
T PF08279_consen 16 ITAKELAEELGVSRRTIRRDIKELREWGIPIESKRG-KGYR 55 (55)
T ss_dssp BEHHHHHHHCTS-HHHHHHHHHHHHHTT-EEEEETT-TEE-
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHCCCeEEeeCC-CCcC
Confidence 3577999999999999 888999999 7788888 7874
No 432
>PF08222 HTH_CodY: CodY helix-turn-helix domain; InterPro: IPR013198 This family consists of the C-terminal helix-turn-helix domain found in several bacterial GTP-sensing transcriptional pleiotropic repressor CodY proteins. CodY has been found to repress the dipeptide transport operon (dpp) of Bacillus subtilis in nutrient-rich conditions []. The CodY protein also has a repressor effect on many genes in Lactococcus lactis during growth in milk [].; PDB: 2B0L_C.
Probab=91.97 E-value=0.0082 Score=40.07 Aligned_cols=35 Identities=3% Similarity=-0.195 Sum_probs=27.7
Q ss_pred CCccccCCcccc---ccccccccchhhhhh-cCCCcccc
Q 012124 28 PGSVSFPSRYLH---NFNLNNDRRVLRVMA-CSGVEEVQ 62 (470)
Q Consensus 28 ~La~~l~vs~~T---Ay~~L~~~G~i~s~~-g~sG~~V~ 62 (470)
.+|++.|+.|+. |+..|++-|+|++|- |-+|||+-
T Consensus 9 ~iAd~~GiTRSvIVNALRKleSaGvIesrSlGmKGT~ik 47 (61)
T PF08222_consen 9 KIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYIK 47 (61)
T ss_dssp HHHHHHT--HHHHHHHHHHHHHTTSEEEEETTSS-EEEE
T ss_pred HHHHHhCccHHHHHHHHHHHHhcCceeecccCCCceeee
Confidence 468999999999 999999999999986 44799974
No 433
>PF13412 HTH_24: Winged helix-turn-helix DNA-binding; PDB: 1I1G_B 2IA0_B 3I4P_A 2GQQ_A 2L4A_A 2CFX_B 2DBB_B 2EFO_A 2EFQ_A 2PN6_A ....
Probab=91.58 E-value=0.0097 Score=39.43 Aligned_cols=28 Identities=4% Similarity=-0.071 Sum_probs=24.2
Q ss_pred CCCCCCccccCCcccc---ccccccccchhh
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLR 51 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~ 51 (470)
.|+++||+.+|+|++| ...+|+++|+|+
T Consensus 18 ~t~~ela~~~~is~~tv~~~l~~L~~~g~I~ 48 (48)
T PF13412_consen 18 ITQKELAEKLGISRSTVNRYLKKLEEKGLIE 48 (48)
T ss_dssp S-HHHHHHHHTS-HHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHhCCCHHHHHHHHHHHHHCcCcC
Confidence 5789999999999999 999999999984
No 434
>TIGR00122 birA_repr_reg BirA biotin operon repressor domain. This model may recognize some other putative repressor proteins, such as DnrO of Streptomyces peucetius with scores below the noise cutoff but with significance shown by low E-value.
Probab=90.77 E-value=0.023 Score=41.00 Aligned_cols=39 Identities=3% Similarity=-0.210 Sum_probs=32.7
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhcCCCcccccc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQVD 64 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~~ 64 (470)
+..+||+.++||+.| ....|+++|+.....+ .|+++...
T Consensus 15 ~~~eLa~~l~vS~~tv~~~l~~L~~~g~~i~~~~-~g~~l~~~ 56 (69)
T TIGR00122 15 SGEKLGEALGMSRTAVNKHIQTLREWGVDVLTVG-KGYRLPPP 56 (69)
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCCeEEecC-CceEecCc
Confidence 478999999999999 8999999999544447 99998654
No 435
>PF02082 Rrf2: Transcriptional regulator; InterPro: IPR000944 The following uncharacterised bacterial proteins have been shown to be evolutionary related, Desulfovibrio vulgaris protein Rrf2; Escherichia coli hypothetical proteins yfhP and yjeB; Bacillus subtilis hypothetical proteins yhdE, yrzC and ywgB; Mycobacterium tuberculosis hypothetical protein Rv1287; and Synechocystis sp. (strain PCC 6803) hypothetical protein slr0846. These are small proteins of 12 to 18kDa which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators.; PDB: 3T8T_A 3T8R_A 3K69_A 3LWF_C 1XD7_A 2Y75_E 1YLF_C.
Probab=89.97 E-value=0.023 Score=42.70 Aligned_cols=42 Identities=5% Similarity=-0.188 Sum_probs=33.8
Q ss_pred CCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 20 HSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 20 g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
+.+-.|.++||+.+++|..+ ..++|.+.|+|++..|..|-|.
T Consensus 22 ~~~~~s~~eiA~~~~i~~~~l~kil~~L~~~Gli~s~~G~~GGy~ 66 (83)
T PF02082_consen 22 DGKPVSSKEIAERLGISPSYLRKILQKLKKAGLIESSRGRGGGYR 66 (83)
T ss_dssp TSC-BEHHHHHHHHTS-HHHHHHHHHHHHHTTSEEEETSTTSEEE
T ss_pred CCCCCCHHHHHHHHCcCHHHHHHHHHHHhhCCeeEecCCCCCcee
Confidence 33447899999999999999 9999999999999987445554
No 436
>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family.
Probab=89.92 E-value=0.027 Score=40.19 Aligned_cols=36 Identities=0% Similarity=-0.216 Sum_probs=30.7
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
.|.++||+.+|+|+.| ++++|+++|+|+... .|.|+
T Consensus 26 ~s~~ela~~~g~s~~tv~r~l~~L~~~g~i~~~~--~~~~~ 64 (67)
T cd00092 26 LTRQEIADYLGLTRETVSRTLKELEEEGLISRRG--RGKYR 64 (67)
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecC--CCeEE
Confidence 5788999999999999 999999999999874 35443
No 437
>smart00419 HTH_CRP helix_turn_helix, cAMP Regulatory protein.
Probab=89.80 E-value=0.024 Score=37.28 Aligned_cols=30 Identities=0% Similarity=-0.191 Sum_probs=27.0
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhh
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVM 53 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~ 53 (470)
.++++||+.+++|++| +..+|+++|+|+..
T Consensus 9 ~s~~~la~~l~~s~~tv~~~l~~L~~~g~l~~~ 41 (48)
T smart00419 9 LTRQEIAELLGLTRETVSRTLKRLEKEGLISRE 41 (48)
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEe
Confidence 4678999999999999 99999999999754
No 438
>PF01325 Fe_dep_repress: Iron dependent repressor, N-terminal DNA binding domain; InterPro: IPR022687 The DtxR-type HTH domain is a DNA-binding, winged helix-turn-helix (wHTH) domain of about 65 residues present in metalloregulators of the DtxR/MntR family. The family is named after Corynebacterium diphtheriae DtxR, an iron-specific diphtheria toxin repressor, and Bacillus subtilis MntR, a manganese transport regulator. Iron-responsive metalloregulators such as DtxR and IdeR occur in Gram-positive bacteria of the high GC branch, while manganese-responsive metalloregulators like MntR are described in diverse genera of Gram-positive and Gram-negative bacteria and also in Archaea [].The metalloregulators like DtxR/MntR contain the DNA-binding DtxR-type HTH domain usually in the N-terminal part. The C-terminal part contains a dimerisation domain with two metal-binding sites, although the primary metal-binding site is less conserved in the Mn(II)-regulators. Fe(II)-regulated proteins contain an SH3-like domain as a C-terminal extension, which is absent in Mn(II)-regulated MntR [, ]. Metal-ion dependent regulators orchestrate the virulence of several important human pathogens. The DtxR protein regulates the expression of diphtheria toxinin response to environmental iron concentrations. Furthermore, DtxR and IdeR control iron uptake []. Homeostasis of manganese, which is an essential nutrient, is regulated by MntR. A typical DtxR-type metalloregulator binds two divalent metal effectors per monomer, upon which allosteric changes occur that moderate binding to the cognate DNA operators. Iron-bound DtxR homodimers bind to an interrupted palindrome of 19 bp, protecting a sequence of ~30 bp. The crystal structures of iron-regulated and manganese-regulated repressors show that the DNA binding domain contains three alpha-helices and a pair of antiparallel beta-strands. Helices 2 and 3 comprise the helix-turn-helix motif and the beta-strands are called the wing []. This wHTH topology is similar to the lysR-type HTH (see PDOC00043 from PROSITEDOC). Most DtxR-type metalloregulators bind as dimers to the DNA major groove. Several proteins are known to contain a DtxR-type HTH domain. These include- Corynebacterium diphtheriae DtxR, a diphtheria toxin repressor [], which regulates the expression of the high-affinity iron uptake system, other iron-sensitive genes, and the bacteriophage tox gene. Metal-bound DtxR represses transcription by binding the tox operator; if iron is limiting, conformational changes of the wHTH disrupt DNA-binding and the diphtheria toxin is produced. Mycobacterium tuberculosis IdeR, an iron-dependent regulator that is essential for this pathogen. The regulator represses genes for iron acquisition and activates iron storage genes, and is a positive regulator of oxidative stress responses []. Bacillus subtilis MntR, a manganese transport regulator, binds Mn2+ as an effector and is a transcriptional repressor of transporters for the import of manganese. Treponema pallidum troR, a metal-dependent transcriptional repressor. Archaeoglobus fulgidus MDR1 (troR), a metal-dependent transcriptional repressor, which negatively regulates its own transcription. This entry covers the entire DtxR-type HTH domain.; GO: 0005506 iron ion binding; PDB: 3HRT_B 3HRS_A 3HRU_B 2X4H_D 1ON1_B 2HYF_C 2F5E_A 3R60_B 1ON2_B 2F5F_A ....
Probab=89.37 E-value=0.024 Score=39.51 Aligned_cols=35 Identities=0% Similarity=-0.190 Sum_probs=28.9
Q ss_pred CCCCCCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 21 SKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 21 ~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
..-.+..+||+.|+||++| +..+|.++|||+-.+-
T Consensus 20 ~~~v~~~~iA~~L~vs~~tvt~ml~~L~~~GlV~~~~y 57 (60)
T PF01325_consen 20 GGPVRTKDIAERLGVSPPTVTEMLKRLAEKGLVEYEPY 57 (60)
T ss_dssp TSSBBHHHHHHHHTS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred CCCccHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCC
Confidence 3446677999999999999 9999999999987653
No 439
>PF03444 HrcA_DNA-bdg: Winged helix-turn-helix transcription repressor, HrcA DNA-binding; InterPro: IPR005104 Prokaryotic cells have a defence mechanism against a sudden heat-shock stress. Commonly, they induce a set of proteins that protect cellular proteins from being denatured by heat. Among such proteins are the GroE and DnaK chaperones whose transcription is regulated by a heat-shock repressor protein HrcA. HrcA is a winged helix-turn-helix repressor that negatively regulates the transcription of dnaK and groE operons by binding the upstream CIRCE (controlling inverted repeat of chaperone expression) element. In Bacillus subtilis this element is a perfect 9 base pair inverted repeat separated by a 9 base pair spacer. The crystal structure of a heat-inducible transcriptional repressor, HrcA, from Thermotoga maritima has been reported at 2.2A resolution. HrcA is composed of three domains: an N-terminal winged helix-turn-helix domain (WHTH), a GAF-like domain, and an inserted dimerizing domain (IDD). The IDD shows a unique structural fold with an anti-parallel beta-sheet composed of three beta-strands sided by four alpha-helices. HrcA crystallises as a dimer, which is formed through hydrophobic contact between the IDDs and a limited contact that involves conserved residues between the GAF-like domains []. The structural studies suggest that the inactive form of HrcA is the dimer and this is converted to its DNA-binding form by interaction with GroEL, which binds to a conserved C-terminal sequence region [, ]. Comparison of the HrcA-CIRCE complexes from B. subtilis and Bacillus thermoglucosidasius (Geobacillus thermoglucosidasius), which grow at vastly different ranges of temperature shows that the thermostability profiles were consistent with the difference in the growth temperatures suggesting that HrcA can function as a thermosensor to detect temperature changes in cells []. Any increase in temperature causes the dissociation of the HrcA from the CIRCE complex with the concomitant activation of transcription of the groE and dnaK operons. This domain represents the winged helix-turn-helix DNA-binding domain which is located close to the N terminus of HrcA. This domain is also found at the N terminus of a set of uncharacterised proteins that have two C-terminal CBS domains. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=88.46 E-value=0.061 Score=39.13 Aligned_cols=41 Identities=0% Similarity=-0.119 Sum_probs=33.1
Q ss_pred CCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 20 HSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 20 g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
|..+- +++||+.+++|..| -...|++.|||++.++.||=||
T Consensus 21 ~~PVg-Sk~ia~~l~~s~aTIRN~M~~Le~lGlve~~p~~s~Gri 64 (78)
T PF03444_consen 21 GEPVG-SKTIAEELGRSPATIRNEMADLEELGLVESQPHPSGGRI 64 (78)
T ss_pred CCCcC-HHHHHHHHCCChHHHHHHHHHHHHCCCccCCCCCCCCCC
Confidence 33443 68899999999999 8999999999999876466666
No 440
>PF00325 Crp: Bacterial regulatory proteins, crp family; InterPro: IPR001808 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. This family groups together a range of proteins, including anr, crp, clp, cysR, fixK, flp, fnr, fnrN, hlyX and ntcA [, ]. Within this family, the HTH motif is situated towards the C terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2OZ6_A 1CGP_B 2GZW_C 1O3T_B 3ROU_A 2CGP_A 3RDI_A 1I5Z_A 3IYD_H 3FWE_B ....
Probab=88.36 E-value=0.021 Score=33.85 Aligned_cols=25 Identities=0% Similarity=-0.204 Sum_probs=21.9
Q ss_pred CCCCccccCCcccc---ccccccccchh
Q 012124 26 QIPGSVSFPSRYLH---NFNLNNDRRVL 50 (470)
Q Consensus 26 ~R~La~~l~vs~~T---Ay~~L~~~G~i 50 (470)
..++|+.+|++|-| +..+|+++|+|
T Consensus 5 r~diA~~lG~t~ETVSR~l~~l~~~glI 32 (32)
T PF00325_consen 5 RQDIADYLGLTRETVSRILKKLERQGLI 32 (32)
T ss_dssp HHHHHHHHTS-HHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHcCCC
Confidence 45899999999999 99999999986
No 441
>TIGR00738 rrf2_super rrf2 family protein (putative transcriptional regulator). This model represents a superfamily of probable transcriptional regulators. One member, RRF2 of Desulfovibrio vulgaris is an apparent regulatory protein experimentally (MEDLINE:97293189). The N-terminal region appears related to the DNA-binding biotin repressor region of the BirA bifunctional according to results after three rounds of PSI-BLAST with a fairly high stringency.
Probab=88.24 E-value=0.074 Score=43.90 Aligned_cols=44 Identities=2% Similarity=-0.274 Sum_probs=36.5
Q ss_pred CCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 18 FGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 18 ~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
.+|..-+|.++||+.+++++++ ..+.|...|||.+..|..|-|.
T Consensus 20 ~~~~~~~s~~eia~~~~i~~~~v~~il~~L~~~gli~~~~g~~ggy~ 66 (132)
T TIGR00738 20 NPDEGPVSVKEIAERQGISRSYLEKILRTLRRAGLVESVRGPGGGYR 66 (132)
T ss_pred CCCCCcCcHHHHHHHHCcCHHHHHHHHHHHHHCCcEEeccCCCCCcc
Confidence 3666688999999999999999 9999999999998766344443
No 442
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=88.12 E-value=0.11 Score=48.98 Aligned_cols=42 Identities=5% Similarity=-0.215 Sum_probs=38.3
Q ss_pred cCCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcc
Q 012124 17 NFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEE 60 (470)
Q Consensus 17 ~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~ 60 (470)
|+-|.|+ |.|..|..|+||-+| |..+.+..|++++.++ +||.
T Consensus 14 L~vG~kI-SVR~Ia~~l~VSeGTAYRAIKeAen~G~V~Ti~R-vGTv 58 (432)
T COG4109 14 LEVGKKI-SVRGIAKHLKVSEGTAYRAIKEAENLGLVSTIPR-VGTV 58 (432)
T ss_pred cccccee-ehHHhhhhCCcccchHHHHHHHHHhcCceEeccc-ceeE
Confidence 6778887 699999999999999 8899999999999999 9983
No 443
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=87.64 E-value=0.06 Score=39.63 Aligned_cols=38 Identities=3% Similarity=-0.157 Sum_probs=31.6
Q ss_pred CCCCCccccCCcccc---ccccccccch-hhhhhcCCCccccc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRV-LRVMACSGVEEVQV 63 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~-i~s~~g~sG~~V~~ 63 (470)
|--+||+.||+||++ ..++|+++|+ |+++++ +||-+..
T Consensus 21 SGe~La~~LgiSRtaVwK~Iq~Lr~~G~~I~s~~~-kGY~L~~ 62 (79)
T COG1654 21 SGEKLAEELGISRTAVWKHIQQLREEGVDIESVRG-KGYLLPQ 62 (79)
T ss_pred cHHHHHHHHCccHHHHHHHHHHHHHhCCceEecCC-CceeccC
Confidence 344789999999999 9999999998 677767 8987643
No 444
>TIGR00498 lexA SOS regulatory protein LexA. LexA acts as a homodimer to repress a number of genes involved in the response to DNA damage (SOS response), including itself and RecA. RecA, in the presence of single-stranded DNA, acts as a co-protease to activate a latent autolytic protease activity (EC 3.4.21.88) of LexA, where the active site Ser is part of LexA. The autolytic cleavage site is an Ala-Gly bond in LexA (at position 84-85 in E. coli LexA; this sequence is replaced by Gly-Gly in Synechocystis). The cleavage leads to derepression of the SOS regulon and eventually to DNA repair. LexA in Bacillus subtilis is called DinR. LexA is much less broadly distributed than RecA.
Probab=86.94 E-value=0.088 Score=46.98 Aligned_cols=32 Identities=6% Similarity=-0.078 Sum_probs=30.2
Q ss_pred CCCCCCccccCCc-ccc---ccccccccchhhhhhc
Q 012124 24 PAQIPGSVSFPSR-YLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 24 Ps~R~La~~l~vs-~~T---Ay~~L~~~G~i~s~~g 55 (470)
|+.|+||+.+|++ ++| ..+.|+++|+|+...|
T Consensus 26 ~~~~ela~~~~~~s~~tv~~~l~~L~~~g~i~~~~~ 61 (199)
T TIGR00498 26 PSIREIARAVGLRSPSAAEEHLKALERKGYIERDPG 61 (199)
T ss_pred CcHHHHHHHhCCCChHHHHHHHHHHHHCCCEecCCC
Confidence 8899999999998 999 9999999999999866
No 445
>PRK11050 manganese transport regulator MntR; Provisional
Probab=86.65 E-value=0.07 Score=45.27 Aligned_cols=38 Identities=3% Similarity=-0.146 Sum_probs=33.2
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhcCCCccccc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQV 63 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~~ 63 (470)
++++||+.|+||++| ++++|+++|||..+++ .|++++.
T Consensus 53 t~~eLA~~l~is~stVsr~l~~Le~~GlI~r~~~-~~v~LT~ 93 (152)
T PRK11050 53 RQVDIAARLGVSQPTVAKMLKRLARDGLVEMRPY-RGVFLTP 93 (152)
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC-CceEECc
Confidence 578999999999999 9999999999998776 6766654
No 446
>PRK11886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional
Probab=85.55 E-value=0.11 Score=50.06 Aligned_cols=38 Identities=0% Similarity=-0.203 Sum_probs=33.4
Q ss_pred CCCCccccCCcccc---ccccccccch-hhhhhcCCCcccccc
Q 012124 26 QIPGSVSFPSRYLH---NFNLNNDRRV-LRVMACSGVEEVQVD 64 (470)
Q Consensus 26 ~R~La~~l~vs~~T---Ay~~L~~~G~-i~s~~g~sG~~V~~~ 64 (470)
.-+||+.++|||+| +.+.|+++|+ |++..| +||++...
T Consensus 21 ~~~LA~~lgvsr~tV~~~l~~L~~~G~~i~~~~~-~Gy~L~~~ 62 (319)
T PRK11886 21 GEQLGEELGISRAAIWKHIQTLEEWGLDIFSVKG-KGYRLAEP 62 (319)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCCceEEecC-CeEEecCc
Confidence 34899999999999 9999999999 888888 89987553
No 447
>TIGR02944 suf_reg_Xantho FeS assembly SUF system regulator, gammaproteobacterial. The SUF system is an oxygen-resistant iron-sulfur cluster assembly system found in both aerobes and facultative anaerobes. Its presence appears to be a marker of oxygen tolerance; strict anaerobes and microaerophiles tend to have different FeS cluster biosynthesis systems. Members of this protein family belong to the rrf2 family of transcriptional regulators and are found, typically, as the first gene of a SUF operon. It is found only in a subset of genomes that encode the SUF system, including the genus Xanthomonas. The conserved location suggests an autoregulatory role.
Probab=84.89 E-value=0.13 Score=42.36 Aligned_cols=35 Identities=3% Similarity=-0.259 Sum_probs=31.1
Q ss_pred CCCCCCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 21 SKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 21 ~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
..-.|.++||+.+++|+++ ..+.|++.|+|++..|
T Consensus 23 ~~~~s~~eia~~l~is~~~v~~~l~~L~~~Gli~~~~g 60 (130)
T TIGR02944 23 SQPYSAAEIAEQTGLNAPTVSKILKQLSLAGIVTSKRG 60 (130)
T ss_pred CCCccHHHHHHHHCcCHHHHHHHHHHHHHCCcEEecCC
Confidence 3456899999999999999 9999999999998764
No 448
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=84.78 E-value=7.7 Score=34.66 Aligned_cols=99 Identities=19% Similarity=0.217 Sum_probs=68.5
Q ss_pred cEEEecChHHHHHHHHHHhcCCCCeEE----E--cCC-CC----CCh---HHHHHHcCCEEEEecCcCCCCCccCHHhHh
Q 012124 156 QILVSNGAKQSILQAVLAVCSPGDEVI----I--PAP-FW----VSY---PEMARIADATPVILPTRISENFLLDPKVLE 221 (470)
Q Consensus 156 ~i~it~g~~~al~~~~~~l~~~gd~Vl----v--~~p-~y----~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 221 (470)
-+.+-+|+.....++..++ +.|..|. + +++ +| ++. .-.++..|..++.....- ...-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence 3677899999988766665 4564332 1 122 12 222 234677999988888753 2334677887
Q ss_pred hhccC-CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 012124 222 SKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 265 (470)
Q Consensus 222 ~~l~~-~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI 265 (470)
++++. +...|+ +|.+.+..++.++-.+|++. |+.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~l-Gl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEEL-GLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHh-CCEEe
Confidence 77754 555776 89999999999999999999 87765
No 449
>smart00550 Zalpha Z-DNA-binding domain in adenosine deaminases. Helix-turn-helix-containing domain. Also known as Zab.
Probab=84.40 E-value=0.099 Score=37.51 Aligned_cols=35 Identities=0% Similarity=-0.254 Sum_probs=29.0
Q ss_pred CCCCccccCCcccc---ccccccccchhhhhhcCCCcc
Q 012124 26 QIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEE 60 (470)
Q Consensus 26 ~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~ 60 (470)
..+||+.||++++| ....|+++|+|+......++|
T Consensus 25 a~eLa~~lgl~~~~v~r~L~~L~~~G~V~~~~~~~~~W 62 (68)
T smart00550 25 ALQLAKNLGLPKKEVNRVLYSLEKKGKVCKQGGTPPLW 62 (68)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCce
Confidence 67999999999999 999999999998875412544
No 450
>PRK11920 rirA iron-responsive transcriptional regulator; Reviewed
Probab=82.95 E-value=0.17 Score=42.88 Aligned_cols=42 Identities=2% Similarity=-0.122 Sum_probs=35.3
Q ss_pred CCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 19 GHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 19 ~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
++. ..|++++|+.++||++. ....|...|+|+|..|..|-|.
T Consensus 21 ~~~-~~s~~eIA~~~~is~~~L~kIl~~L~~aGlv~S~rG~~GGy~ 65 (153)
T PRK11920 21 DGK-LSRIPEIARAYGVSELFLFKILQPLVEAGLVETVRGRNGGVR 65 (153)
T ss_pred CCC-cCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeecCCCCCee
Confidence 344 45899999999999999 9999999999999998555554
No 451
>PF04703 FaeA: FaeA-like protein; PDB: 2JT1_A 2HTJ_A.
Probab=82.89 E-value=0.06 Score=37.60 Aligned_cols=35 Identities=0% Similarity=-0.207 Sum_probs=27.8
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhcCCC
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGV 58 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG 58 (470)
.+.|++|+.+|+|+.| -.+.|+++|.|+..+.++|
T Consensus 16 ~~T~eiA~~~gls~~~aR~yL~~Le~eG~V~~~~~~rG 53 (62)
T PF04703_consen 16 LKTREIADALGLSIYQARYYLEKLEKEGKVERSPVRRG 53 (62)
T ss_dssp EEHHHHHHHHTS-HHHHHHHHHHHHHCTSEEEES-SSS
T ss_pred CCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEecCCCC
Confidence 5678999999999999 7899999999987542255
No 452
>PF01978 TrmB: Sugar-specific transcriptional regulator TrmB; InterPro: IPR002831 TrmB, is a protein of 38,800 apparent molecular weight, that is involved in the maltose-specific regulation of the trehalose/maltose ABC transport operon in Thermococcus litoralis. TrmB has been shown to be a maltose-specific repressor, and this inhibition is counteracted by maltose and trehalose. TrmB binds maltose and trehalose half-maximally at 20 uM and 0.5 mM sugar concentration, respectively []. Other members of this family are annotated as either transcriptional regulators or hypothetical proteins. ; PDB: 2D1H_A 3QPH_A 1SFX_A.
Probab=82.25 E-value=0.068 Score=38.34 Aligned_cols=31 Identities=0% Similarity=-0.137 Sum_probs=28.0
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
+.+++|+.+|++++| +.+.|+++|+|+...+
T Consensus 24 t~~eIa~~l~i~~~~v~~~L~~L~~~GlV~~~~~ 57 (68)
T PF01978_consen 24 TAEEIAEELGISRSTVYRALKSLEEKGLVEREEG 57 (68)
T ss_dssp EHHHHHHHHTSSHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEcC
Confidence 457899999999999 9999999999998876
No 453
>COG1959 Predicted transcriptional regulator [Transcription]
Probab=82.12 E-value=0.23 Score=41.90 Aligned_cols=44 Identities=2% Similarity=-0.215 Sum_probs=37.5
Q ss_pred CCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 18 FGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 18 ~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
.++.++-|+.++|+..+||++- .+.+|...|+|+|++|..|=|+
T Consensus 20 ~~~~~~~s~~~IA~~~~is~~~L~kil~~L~kaGlV~S~rG~~GGy~ 66 (150)
T COG1959 20 LPGGGPVSSAEIAERQGISPSYLEKILSKLRKAGLVKSVRGKGGGYR 66 (150)
T ss_pred CCCCCcccHHHHHHHhCcCHHHHHHHHHHHHHcCCEEeecCCCCCcc
Confidence 4566666799999999999998 9999999999999998556555
No 454
>smart00420 HTH_DEOR helix_turn_helix, Deoxyribose operon repressor.
Probab=82.06 E-value=0.12 Score=34.66 Aligned_cols=32 Identities=6% Similarity=-0.042 Sum_probs=28.7
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
++..+|++.+++|++| ..+.|+++|+|....+
T Consensus 15 ~s~~~l~~~l~~s~~tv~~~l~~L~~~g~i~~~~~ 49 (53)
T smart00420 15 VSVEELAELLGVSEMTIRRDLNKLEEQGLLTRVHG 49 (53)
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeec
Confidence 7899999999999999 8899999999987643
No 455
>PF12802 MarR_2: MarR family; PDB: 3ECO_B 2QWW_B 3KP6_B 3KP4_B 3KP2_A 3KP5_A 3KP3_B 3KP7_A 3NQO_B 3K0L_B ....
Probab=81.50 E-value=0.08 Score=37.04 Aligned_cols=31 Identities=3% Similarity=-0.194 Sum_probs=26.8
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
+.++||+.++++++| ..+.|+++|||+....
T Consensus 23 t~~~la~~l~~~~~~vs~~v~~L~~~Glv~r~~~ 56 (62)
T PF12802_consen 23 TQSELAERLGISKSTVSRIVKRLEKKGLVERERD 56 (62)
T ss_dssp EHHHHHHHHTS-HHHHHHHHHHHHHTTSEEEEE-
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 588999999999999 9999999999987754
No 456
>TIGR02010 IscR iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system.
Probab=81.41 E-value=0.22 Score=41.34 Aligned_cols=43 Identities=7% Similarity=-0.150 Sum_probs=36.3
Q ss_pred CCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 19 GHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 19 ~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
++.+..|.+++|+.++++... ..++|...|||.+..|..|-|.
T Consensus 21 ~~~~~~s~~~ia~~~~ip~~~l~kil~~L~~~glv~s~~G~~Ggy~ 66 (135)
T TIGR02010 21 AETGPVTLADISERQGISLSYLEQLFAKLRKAGLVKSVRGPGGGYQ 66 (135)
T ss_pred CCCCcCcHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEeCCCCCEe
Confidence 455678899999999999998 9999999999999777455554
No 457
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=81.26 E-value=21 Score=33.65 Aligned_cols=70 Identities=13% Similarity=0.237 Sum_probs=48.9
Q ss_pred EcCCCCCChHHHHHH--cCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012124 183 IPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 260 (470)
Q Consensus 183 v~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~ 260 (470)
..-|+|++..++-+. -..-++.+|.. .-++.++++...+++.+++.+... +...-++|.++|+++
T Consensus 47 ~G~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~- 113 (286)
T TIGR01019 47 LGLPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEES- 113 (286)
T ss_pred cCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-
Confidence 445677777777665 35555666632 356788888888888877755543 333457899999999
Q ss_pred CEEEE
Q 012124 261 RLLVL 265 (470)
Q Consensus 261 ~~~iI 265 (470)
++.|+
T Consensus 114 giril 118 (286)
T TIGR01019 114 GTRLI 118 (286)
T ss_pred CCEEE
Confidence 99998
No 458
>PF08220 HTH_DeoR: DeoR-like helix-turn-helix domain; InterPro: IPR001034 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after the Escherichia coli protein DeoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerisation domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular
Probab=80.38 E-value=0.12 Score=35.57 Aligned_cols=31 Identities=6% Similarity=0.031 Sum_probs=27.9
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
+..+||+.|+||..| =+..|+++|+|....|
T Consensus 16 s~~ela~~~~VS~~TiRRDl~~L~~~g~i~r~~G 49 (57)
T PF08220_consen 16 SVKELAEEFGVSEMTIRRDLNKLEKQGLIKRTHG 49 (57)
T ss_pred EHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEcC
Confidence 567899999999999 8899999999988766
No 459
>PF02796 HTH_7: Helix-turn-helix domain of resolvase; InterPro: IPR006120 Site-specific recombination plays an important role in DNA rearrangement in prokaryotic organisms. Two types of site-specific recombination are known to occur: Recombination between inverted repeats resulting in the reversal of a DNA segment. Recombination between repeat sequences on two DNA molecules resulting in their cointegration, or between repeats on one DNA molecule resulting in the excision of a DNA fragment. Site-specific recombination is characterised by a strand exchange mechanism that requires no DNA synthesis or high energy cofactor; the phosphodiester bond energy is conserved in a phospho-protein linkage during strand cleavage and re-ligation. Two unrelated families of recombinases are currently known []. The first, called the 'phage integrase' family, groups a number of bacterial phage and yeast plasmid enzymes. The second [], called the 'resolvase' family, groups enzymes which share the following structural characteristics: an N-terminal catalytic and dimerization domain that contains a conserved serine residue involved in the transient covalent attachment to DNA IPR006119 from INTERPRO, and a C-terminal helix-turn-helix DNA-binding domain. ; GO: 0000150 recombinase activity, 0003677 DNA binding, 0006310 DNA recombination; PDB: 1ZR2_A 2GM4_B 1RES_A 1ZR4_A 1RET_A 1GDT_B 2R0Q_C 1JKP_C 1IJW_C 1JJ6_C ....
Probab=79.39 E-value=0.16 Score=32.99 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=16.8
Q ss_pred CCCCCccccCCccccccccccc
Q 012124 25 AQIPGSVSFPSRYLHNFNLNND 46 (470)
Q Consensus 25 s~R~La~~l~vs~~TAy~~L~~ 46 (470)
|.+++|+.+||||+|.|.-|.+
T Consensus 23 si~~IA~~~gvsr~TvyR~l~~ 44 (45)
T PF02796_consen 23 SIAEIAKQFGVSRSTVYRYLNK 44 (45)
T ss_dssp -HHHHHHHTTS-HHHHHHHHCC
T ss_pred CHHHHHHHHCcCHHHHHHHHhc
Confidence 5889999999999997766543
No 460
>PRK04158 transcriptional repressor CodY; Validated
Probab=78.65 E-value=0.69 Score=42.09 Aligned_cols=35 Identities=3% Similarity=-0.195 Sum_probs=31.7
Q ss_pred CCccccCCcccc---ccccccccchhhhhh-cCCCcccc
Q 012124 28 PGSVSFPSRYLH---NFNLNNDRRVLRVMA-CSGVEEVQ 62 (470)
Q Consensus 28 ~La~~l~vs~~T---Ay~~L~~~G~i~s~~-g~sG~~V~ 62 (470)
..|++-|+.|+- |...|++-|.|+||- |-+|||+.
T Consensus 206 kiADrvgITRSVIVNALRK~ESAGvIESrSlGMKGTyik 244 (256)
T PRK04158 206 KIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYIK 244 (256)
T ss_pred ecccccCCchhhhhhhhhhhhcccceeeccCCCCceeEE
Confidence 579999999999 999999999999987 55999984
No 461
>TIGR02702 SufR_cyano iron-sulfur cluster biosynthesis transcriptional regulator SufR. All members of this cyanobacterial protein family are the transcriptional regulator SufR and regulate the SUF system, which makes possible iron-sulfur cluster biosynthesis despite exposure to oxygen. In all cases, the sufR gene is encoded near SUF system genes but in the opposite direction. This DNA-binding protein belongs to the the DeoR family of helix-loop-helix proteins. All members also have a probable metal-binding motif C-X(12)-C-X(13)-C-X(14)-C near the C-terminus.
Probab=78.60 E-value=0.13 Score=45.98 Aligned_cols=38 Identities=0% Similarity=-0.162 Sum_probs=32.0
Q ss_pred CcccCCCCCCCCCCCCccccCCcccc---ccccccccchhhhh
Q 012124 14 NPVNFGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVM 53 (470)
Q Consensus 14 ~~~~~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~ 53 (470)
+...+.|. +|..+||+.++||++| .+++|+++|||+.+
T Consensus 8 ~~L~~~~~--~t~~eLA~~lgis~~tV~~~L~~Le~~GlV~r~ 48 (203)
T TIGR02702 8 SYLLKQGQ--ATAAALAEALAISPQAVRRHLKDLETEGLIEYE 48 (203)
T ss_pred HHHHHcCC--CCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEe
Confidence 33344454 7899999999999999 99999999999876
No 462
>PF13936 HTH_38: Helix-turn-helix domain; PDB: 2W48_A.
Probab=78.16 E-value=0.16 Score=32.77 Aligned_cols=22 Identities=0% Similarity=-0.380 Sum_probs=15.3
Q ss_pred CCCCCCccccCCcccccccccc
Q 012124 24 PAQIPGSVSFPSRYLHNFNLNN 45 (470)
Q Consensus 24 Ps~R~La~~l~vs~~TAy~~L~ 45 (470)
.|.|++|+.||+|++|.|.+|.
T Consensus 21 ~s~~~IA~~lg~s~sTV~relk 42 (44)
T PF13936_consen 21 MSIREIAKRLGRSRSTVSRELK 42 (44)
T ss_dssp --HHHHHHHTT--HHHHHHHHH
T ss_pred CCHHHHHHHHCcCcHHHHHHHh
Confidence 5799999999999999766653
No 463
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=77.94 E-value=11 Score=34.18 Aligned_cols=96 Identities=17% Similarity=0.085 Sum_probs=54.3
Q ss_pred EEEecC-hHHHHHHHHHHhcCCCCeEEE-cCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEc
Q 012124 157 ILVSNG-AKQSILQAVLAVCSPGDEVII-PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 234 (470)
Q Consensus 157 i~it~g-~~~al~~~~~~l~~~gd~Vlv-~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~ 234 (470)
|+|+.+ +..+-. ++..|++++-.|.+ ..+.-......++..|++++..+.+ |.+.|.++++. ...++++
T Consensus 1 I~V~GatG~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g-~d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG-VDAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT-CSEEEEE
T ss_pred CEEECCccHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC-CceEEee
Confidence 344443 444433 56666667644433 3333111234467789998866652 88999999984 4445554
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 012124 235 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 265 (470)
Q Consensus 235 ~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI 265 (470)
.+.+. ....+.-+.+++.|++. |+-.+
T Consensus 72 ~~~~~---~~~~~~~~~li~Aa~~a-gVk~~ 98 (233)
T PF05368_consen 72 TPPSH---PSELEQQKNLIDAAKAA-GVKHF 98 (233)
T ss_dssp SSCSC---CCHHHHHHHHHHHHHHH-T-SEE
T ss_pred cCcch---hhhhhhhhhHHHhhhcc-ccceE
Confidence 44321 23455678899999998 76444
No 464
>COG5340 Predicted transcriptional regulator [Transcription]
Probab=77.73 E-value=0.56 Score=41.34 Aligned_cols=42 Identities=7% Similarity=-0.188 Sum_probs=37.2
Q ss_pred CCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 18 FGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 18 ~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
..|.+.=++|+.|+.++|+++| +..+|+++|||+.. + .|-|+
T Consensus 25 ae~hkiiTirdvae~~ev~~n~lr~lasrLekkG~LeRi-~-rG~Yl 69 (269)
T COG5340 25 AEGHKIITIRDVAETLEVAPNTLRELASRLEKKGWLERI-L-RGRYL 69 (269)
T ss_pred HHhCceEEeHHhhhhccCCHHHHHHHHhhhhhcchhhhh-c-CccEE
Confidence 3467888999999999999999 99999999999987 6 68877
No 465
>smart00346 HTH_ICLR helix_turn_helix isocitrate lyase regulation.
Probab=77.48 E-value=0.26 Score=37.54 Aligned_cols=37 Identities=3% Similarity=-0.269 Sum_probs=31.1
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
.+..++|+.++++++| ..+.|++.|+|+.... .|.|.
T Consensus 21 ~t~~~ia~~l~i~~~tv~r~l~~L~~~g~l~~~~~-~~~y~ 60 (91)
T smart00346 21 LTLAELAERLGLSKSTAHRLLNTLQELGYVEQDGQ-NGRYR 60 (91)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHCCCeeecCC-CCcee
Confidence 5688999999999999 8888999999988755 55554
No 466
>PF05732 RepL: Firmicute plasmid replication protein (RepL); InterPro: IPR008813 This entry consists of proteins thought to be involved in plasmid replication. ; GO: 0006260 DNA replication, 0006276 plasmid maintenance
Probab=77.45 E-value=0.21 Score=42.86 Aligned_cols=44 Identities=2% Similarity=-0.012 Sum_probs=35.4
Q ss_pred CCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCc-ccccccC
Q 012124 21 SKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVE-EVQVDVS 66 (470)
Q Consensus 21 ~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~-~V~~~~~ 66 (470)
.=+.|++++|+.+++|+.| ++.+|++.|+|... + .|. +|+|+..
T Consensus 73 ~v~~t~~~ia~~l~iS~~Tv~r~ik~L~e~~iI~k~-~-~G~Y~iNP~~~ 120 (165)
T PF05732_consen 73 AVVATQKEIAEKLGISKPTVSRAIKELEEKNIIKKI-R-NGAYMINPNFF 120 (165)
T ss_pred eEEeeHHHHHHHhCCCHHHHHHHHHHHHhCCcEEEc-c-CCeEEECcHHh
Confidence 3356899999999999999 99999999999765 5 674 4566543
No 467
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=77.39 E-value=54 Score=30.65 Aligned_cols=32 Identities=3% Similarity=-0.117 Sum_probs=27.5
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
-+..+||+.|+||+.| =...|+++|++....|
T Consensus 32 vtv~eLa~~l~VS~~TIRRDL~~Le~~G~l~r~~G 66 (269)
T PRK09802 32 VQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYG 66 (269)
T ss_pred EeHHHHHHHHCCCHHHHHHHHHHHHhCCCeEEEeC
Confidence 4667899999999999 7788999999986655
No 468
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=77.09 E-value=23 Score=33.51 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=55.3
Q ss_pred CCcCcHHHHHHHHHHHHHH-cCCCCCCCc-EEEecChHHHHHHHHHHhcCCCCeE--EEcCCCCCChHHHHHHcCCEEEE
Q 012124 129 PNAGTLELRSAICHKLKEE-NGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPGDEV--IIPAPFWVSYPEMARIADATPVI 204 (470)
Q Consensus 129 ~~~g~~~lr~~ia~~l~~~-~g~~~~~~~-i~it~g~~~al~~~~~~l~~~gd~V--lv~~p~y~~~~~~~~~~g~~~~~ 204 (470)
.+.|.-.-|-++.-..... .|. +.+.. |+=.+++.-++.+++-+-. .|=++ ++++..=.....+++.+|++++.
T Consensus 36 NP~gSvKDR~A~~mI~~Ae~~G~-l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~ 113 (300)
T COG0031 36 NPGGSVKDRIALYMIEDAEKRGL-LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVIL 113 (300)
T ss_pred CCCCchhHHHHHHHHHHHHHcCC-CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Confidence 4455433333333222222 343 45554 4445566666776655543 45333 33443333455789999999999
Q ss_pred ecCcCCCCCccCHHhHhhhccCCce-EEEEcCCCCCc
Q 012124 205 LPTRISENFLLDPKVLESKLTEKSR-LLILCSPSNPT 240 (470)
Q Consensus 205 v~~~~~~~~~~d~~~l~~~l~~~~~-~i~l~~p~nPt 240 (470)
+|-.+ +...=-.+.+++...+.+. +++.+...||.
T Consensus 114 t~~~~-g~~~~a~~~a~el~~~~p~~~~~~~Qf~Npa 149 (300)
T COG0031 114 TPGAP-GNMKGAIERAKELAAEIPGYAVWLNQFENPA 149 (300)
T ss_pred cCCCC-CchHHHHHHHHHHHHhCCCceEchhhcCCCc
Confidence 99721 2111123333334444544 66655555554
No 469
>smart00418 HTH_ARSR helix_turn_helix, Arsenical Resistance Operon Repressor.
Probab=76.10 E-value=0.24 Score=34.55 Aligned_cols=30 Identities=0% Similarity=-0.159 Sum_probs=27.0
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhh
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMA 54 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~ 54 (470)
+..++++.+++|++| +.++|.++|+|....
T Consensus 12 ~~~~i~~~l~is~~~v~~~l~~L~~~g~i~~~~ 44 (66)
T smart00418 12 CVCELAEILGLSQSTVSHHLKKLREAGLVESRR 44 (66)
T ss_pred cHHHHHHHHCCCHHHHHHHHHHHHHCCCeeeee
Confidence 467899999999999 999999999998765
No 470
>PF09339 HTH_IclR: IclR helix-turn-helix domain; InterPro: IPR005471 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One of these subfamilies, called 'iclR', groups several proteins including: gylR, a possible activator protein for the gylABX glycerol operon in Streptomyces. iclR, the repressor of the acetate operon (also known as glyoxylate bypass operon) in Escherichia coli and Salmonella typhimurium. These proteins have a Helix-Turn-Helix motif at the N terminus that is similar to that of other DNA-binding proteins [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1MKM_A 3MQ0_A 3R4K_A 2G7U_C 2O0Y_C 2XRO_F 2XRN_B 2IA2_D.
Probab=75.96 E-value=0.15 Score=34.36 Aligned_cols=28 Identities=0% Similarity=-0.238 Sum_probs=24.4
Q ss_pred CCCCCccccCCcccc---ccccccccchhhh
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRV 52 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s 52 (470)
+..+||+.+|++++| ....|+++|||+.
T Consensus 20 t~~eia~~~gl~~stv~r~L~tL~~~g~v~~ 50 (52)
T PF09339_consen 20 TLSEIARALGLPKSTVHRLLQTLVEEGYVER 50 (52)
T ss_dssp EHHHHHHHHTS-HHHHHHHHHHHHHTTSEEE
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHCcCeec
Confidence 788999999999999 8889999999864
No 471
>PF01047 MarR: MarR family; InterPro: IPR000835 The MarR-type HTH domain is a DNA-binding, winged helix-turn-helix (wHTH) domain of about 135 amino acids present in transcription regulators of the MarR/SlyA family, involved in the development of antibiotic resistance. This family of transcription regulators is named after Escherichia coli MarR, a repressor of genes which activate the multiple antibiotic resistance and oxidative stress regulons, and after slyA from Salmonella typhimurium and E. coli, a transcription regulator that is required for virulence and survival in the macrophage environment. Regulators with the MarR-type HTH domain are present in bacteria and archaea and control a variety of biological functions, including resistance to multiple antibiotics, household disinfectants, organic solvents, oxidative stress agents and regulation of the virulence factor synthesis in pathogens of humans and plants. Many of the MarR-like regulators respond to aromatic compounds [, , ]. The crystal structures of MarR, MexR and SlyA have been determined and show a winged HTH DNA-binding core flanked by helices involved in dimerisation. The DNA-binding domains are ascribed to the superfamily of winged helix proteins, containing a three (four)-helix (H) bundle and a three-stranded antiparallel beta-sheet (B) in the topology: H1-(H1')-H2-B1-H3-H4-B2-B3-H5-H6. Helices 3 and 4 comprise the helix-turn-helix motif and the beta-sheet is called the wing. Helix 4 is termed the recognition helix, like in other HTHs where it binds the DNA major groove. The helices 1, 5 and 6 are involved in dimerisation, as most MarR-like transcription regulators form dimers [, ]. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1JGS_A 2NYX_D 2PEX_B 2PFB_A 3BPX_A 3BPV_A 2BV6_A 3BJA_A 3E6M_B 2ETH_A ....
Probab=75.00 E-value=0.14 Score=35.40 Aligned_cols=31 Identities=3% Similarity=-0.160 Sum_probs=26.5
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhh
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMA 54 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~ 54 (470)
.++-+||+.++++++| ..+.|+++|||+...
T Consensus 18 ~~~~~la~~~~~~~~~~t~~i~~L~~~g~I~r~~ 51 (59)
T PF01047_consen 18 ITQSELAEKLGISRSTVTRIIKRLEKKGLIERER 51 (59)
T ss_dssp EEHHHHHHHHTS-HHHHHHHHHHHHHTTSEEEEE
T ss_pred CCHHHHHHHHCCChhHHHHHHHHHHHCCCEEecc
Confidence 3566899999999999 999999999998764
No 472
>PF13545 HTH_Crp_2: Crp-like helix-turn-helix domain; PDB: 3LA2_A 3LA3_B 3LA7_A 3B02_A 3E97_A 2H6C_B 1OMI_A 2BGC_H 2BEO_A 2GAU_A ....
Probab=74.78 E-value=0.21 Score=36.58 Aligned_cols=29 Identities=10% Similarity=-0.058 Sum_probs=26.5
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhh
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVM 53 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~ 53 (470)
++-+||..+|+||.| ...+|+++|+|...
T Consensus 30 t~~~iA~~~g~sr~tv~r~l~~l~~~g~I~~~ 61 (76)
T PF13545_consen 30 TQEEIADMLGVSRETVSRILKRLKDEGIIEVK 61 (76)
T ss_dssp SHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEc
Confidence 466899999999999 99999999999855
No 473
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=74.25 E-value=21 Score=33.76 Aligned_cols=71 Identities=11% Similarity=0.249 Sum_probs=50.3
Q ss_pred EEcCCCCCChHHHHHH--cCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012124 182 IIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 259 (470)
Q Consensus 182 lv~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~ 259 (470)
+..-|+|++..++-+. -.+-++.+|.. .-++.++++...++|.+++.+-.. +.++-++|.++|+++
T Consensus 48 v~G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~ 115 (291)
T PRK05678 48 VLGLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERK 115 (291)
T ss_pred EeCeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc
Confidence 3445677777777765 45566666642 357888888888888877655443 245456899999999
Q ss_pred CCEEEE
Q 012124 260 PRLLVL 265 (470)
Q Consensus 260 ~~~~iI 265 (470)
++.|+
T Consensus 116 -girvl 120 (291)
T PRK05678 116 -KTRLI 120 (291)
T ss_pred -CCEEE
Confidence 99999
No 474
>PRK10857 DNA-binding transcriptional regulator IscR; Provisional
Probab=73.69 E-value=0.55 Score=40.31 Aligned_cols=44 Identities=7% Similarity=-0.157 Sum_probs=37.0
Q ss_pred CCCCCCCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 18 FGHSKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 18 ~~g~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
..+.+..|..++|+.+++++.. ..+.|...|+|.+..|..|-|.
T Consensus 20 ~~~~~~vs~~eIA~~~~ip~~~l~kIl~~L~~aGLv~s~rG~~GGy~ 66 (164)
T PRK10857 20 NSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYL 66 (164)
T ss_pred CCCCCcCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeCCCCCCCee
Confidence 3455567899999999999999 9999999999999876566665
No 475
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.25 E-value=31 Score=32.49 Aligned_cols=139 Identities=11% Similarity=0.064 Sum_probs=76.3
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCcCCCCCccCHHhHhhhccC--
Q 012124 152 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 226 (470)
Q Consensus 152 ~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 226 (470)
++.+-++||.|+...-..+..-+.+.|-++++-|-.=.+..+. ++..| ++..+-.|-.+. =++..+.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 5666778888877777777777888998776655443333333 33335 555555443221 134444455543
Q ss_pred CceEEEEcCCC---CCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCCCCcccccccCCCCCceEEEeccCccc
Q 012124 227 KSRLLILCSPS---NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 303 (470)
Q Consensus 227 ~~~~i~l~~p~---nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~~~~~~~~~~~~~~~~~i~i~S~sK~~ 303 (470)
+.--|+++|.. .-....++.+++++..++=-- +.|+....-.|.+.... .+.++.+.|..=.+
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~------------~~f~t~kaFLP~M~~~~--~GHIV~IaS~aG~~ 178 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI------------AHFWTTKAFLPKMLENN--NGHIVTIASVAGLF 178 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHHhhH------------HHHHHHHHHhHHHHhcC--CceEEEehhhhccc
Confidence 33345666652 333455788888877764211 12222122223443333 57888888876666
Q ss_pred cccc
Q 012124 304 AMTG 307 (470)
Q Consensus 304 ~~~G 307 (470)
|.+|
T Consensus 179 g~~g 182 (300)
T KOG1201|consen 179 GPAG 182 (300)
T ss_pred CCcc
Confidence 6554
No 476
>PRK03902 manganese transport transcriptional regulator; Provisional
Probab=69.54 E-value=0.53 Score=39.39 Aligned_cols=39 Identities=3% Similarity=-0.227 Sum_probs=31.3
Q ss_pred CCCCCCCccccCCcccc---ccccccccchhhhhhcCCCcccc
Q 012124 23 IPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEVQ 62 (470)
Q Consensus 23 lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V~ 62 (470)
.++..+||+.|+||.+| +.+.|+++|||..... .|...+
T Consensus 22 ~~~~~ela~~l~vs~~svs~~l~~L~~~Gli~~~~~-~~i~LT 63 (142)
T PRK03902 22 YARVSDIAEALSVHPSSVTKMVQKLDKDEYLIYEKY-RGLVLT 63 (142)
T ss_pred CcCHHHHHHHhCCChhHHHHHHHHHHHCCCEEEecC-ceEEEC
Confidence 34678999999999999 9999999999986544 554443
No 477
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=69.46 E-value=44 Score=30.25 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=65.3
Q ss_pred EEEecChHHHHHHHHHHhcCCCCeEEE----cCC--CC--C--C---hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhh
Q 012124 157 ILVSNGAKQSILQAVLAVCSPGDEVII----PAP--FW--V--S---YPEMARIADATPVILPTRISENFLLDPKVLESK 223 (470)
Q Consensus 157 i~it~g~~~al~~~~~~l~~~gd~Vlv----~~p--~y--~--~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 223 (470)
++..||+......+..++.+ -+.+.+ +.. .| + + ....++..|..++.++..... .--.+.|.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~--e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTE--EDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCc--cHHHHHHHHH
Confidence 56779999999988888766 554332 111 12 1 1 123467799988776653221 1244566666
Q ss_pred ccC-CceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 012124 224 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 265 (470)
Q Consensus 224 l~~-~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI 265 (470)
+++ +...++ +|.+.+..++..+-++|.+. |+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~l-gl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCREL-GLKSF 115 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhc-CCEEe
Confidence 543 566666 89999999999999999998 87765
No 478
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=66.97 E-value=0.65 Score=40.88 Aligned_cols=31 Identities=3% Similarity=-0.006 Sum_probs=27.9
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
++.+||+.+|+||.| +.++|+++|+|+...+
T Consensus 145 t~~~iA~~lG~tretvsR~l~~l~~~g~I~~~~~ 178 (193)
T TIGR03697 145 SHQAIAEAIGSTRVTITRLLGDLRKKKLISIHKK 178 (193)
T ss_pred CHHHHHHHhCCcHHHHHHHHHHHHHCCCEEecCC
Confidence 577999999999999 9999999999987633
No 479
>COG4465 CodY Pleiotropic transcriptional repressor [Transcription]
Probab=66.28 E-value=1.3 Score=38.84 Aligned_cols=36 Identities=3% Similarity=-0.206 Sum_probs=31.9
Q ss_pred CCCccccCCcccc---ccccccccchhhhhh-cCCCcccc
Q 012124 27 IPGSVSFPSRYLH---NFNLNNDRRVLRVMA-CSGVEEVQ 62 (470)
Q Consensus 27 R~La~~l~vs~~T---Ay~~L~~~G~i~s~~-g~sG~~V~ 62 (470)
-..|++-|+.|+. |...|++.|.|+||. |-+|||.-
T Consensus 208 SkiADrvGITRSVIVNALRKlESAGvIeSRSLGMKGTyik 247 (261)
T COG4465 208 SKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYIK 247 (261)
T ss_pred hhhhhhhCchHHHHHHHHHHhhhcCceeecccCccceeEe
Confidence 3579999999999 999999999999987 55899974
No 480
>PRK14165 winged helix-turn-helix domain-containing protein/riboflavin kinase; Provisional
Probab=66.21 E-value=0.62 Score=41.80 Aligned_cols=37 Identities=3% Similarity=-0.156 Sum_probs=30.7
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
|+.+||+.|++|++| ..++|+++|||+.....++.+|
T Consensus 23 S~~eLA~~L~iS~~Tvsr~Lk~LEe~GlI~R~~~~r~~~v 62 (217)
T PRK14165 23 SSSEFANHTGTSSKTAARILKQLEDEGYITRTIVPRGQLI 62 (217)
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEEcCCceEE
Confidence 589999999999999 9999999999987653245444
No 481
>PLN02591 tryptophan synthase
Probab=65.76 E-value=1.1e+02 Score=28.20 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=100.4
Q ss_pred HHHHHHHHhcCCCeEEccCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHHHHHcCCCCCCCcEEEec
Q 012124 83 TDQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 161 (470)
Q Consensus 83 ~~~~~~~~~~~~~~i~l~~g~~~~~~-~~~~~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~it~ 161 (470)
.+.+..+.+.|-++|.++.-..|.-. -|.+.++..+++.++.. ....-+.+.+. ++...++ =|++|=
T Consensus 19 ~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~-------~~~~~~~~~~~-r~~~~~p----~ilm~Y 86 (250)
T PLN02591 19 AEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTT-------LDSVISMLKEV-APQLSCP----IVLFTY 86 (250)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHH-hcCCCCC----EEEEec
Confidence 34456667788888888766655433 36788888888876432 12333333332 1111111 133332
Q ss_pred C---hHHHHHHHHHHhcCCC-CeEEEcCCCCCC---hHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEc
Q 012124 162 G---AKQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 234 (470)
Q Consensus 162 g---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~ 234 (470)
- -+.+++.++..+.+.| |.|++++--+-. +...++..|...+.+-.. + .+.+.+++........||+.
T Consensus 87 ~N~i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P--t---t~~~ri~~ia~~~~gFIY~V 161 (250)
T PLN02591 87 YNPILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP--T---TPTERMKAIAEASEGFVYLV 161 (250)
T ss_pred ccHHHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC--C---CCHHHHHHHHHhCCCcEEEe
Confidence 1 1336666777777777 899998865432 334567788887766532 2 34456666665566777776
Q ss_pred CCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEE
Q 012124 235 SPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 266 (470)
Q Consensus 235 ~p~nPtG~~~s-~~~~~~l~~~~~~~~~~~iI~ 266 (470)
+-...||..-. .+.++++++.++++.+..|++
T Consensus 162 s~~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 162 SSTGVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred eCCCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 66777886433 466788788888765777774
No 482
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=65.52 E-value=69 Score=30.48 Aligned_cols=74 Identities=11% Similarity=0.197 Sum_probs=49.9
Q ss_pred CeEEEcCCCCCChHHHHHH--cCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCC-CcccCCCHHHHHHHHHH
Q 012124 179 DEVIIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN-PTGSVYPKNLLDEIARI 255 (470)
Q Consensus 179 d~Vlv~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~n-PtG~~~s~~~~~~l~~~ 255 (470)
++| ..-|+|++..++-+. -.+-++.+|.. .-++.++++...+++.+++.+... .+| ..+.+.++
T Consensus 50 ~~i-~G~~~y~sv~dlp~~~~~DlAvI~vPa~------~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~ 116 (300)
T PLN00125 50 TEH-LGLPVFNTVAEAKAETKANASVIYVPPP------FAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAAL 116 (300)
T ss_pred ceE-cCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHH
Confidence 443 467888888887764 35556666642 356788888888899877765544 343 24455667
Q ss_pred HHhCCCEEEEE
Q 012124 256 VAKHPRLLVLS 266 (470)
Q Consensus 256 ~~~~~~~~iI~ 266 (470)
|+++ ++.||=
T Consensus 117 ar~~-girviG 126 (300)
T PLN00125 117 NRQS-KTRLIG 126 (300)
T ss_pred Hhhc-CCEEEC
Confidence 8999 999983
No 483
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=65.43 E-value=57 Score=30.19 Aligned_cols=31 Identities=10% Similarity=0.000 Sum_probs=27.2
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
+..+||+.|+||..| =..+|+++|+|....|
T Consensus 21 ~v~eLa~~~~VS~~TIRRDL~~Le~~g~l~R~hG 54 (253)
T COG1349 21 SVEELAELFGVSEMTIRRDLNELEEQGLLLRVHG 54 (253)
T ss_pred EHHHHHHHhCCCHHHHHHhHHHHHHCCcEEEEeC
Confidence 356899999999999 6779999999998877
No 484
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=65.33 E-value=1.3e+02 Score=28.82 Aligned_cols=96 Identities=20% Similarity=0.173 Sum_probs=51.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCC-ceE
Q 012124 154 PDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK-SRL 230 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~ 230 (470)
...|+..+++..+..++..+-. .| -.|+++...-......++.+|++++.++-+ +.-+...+.+.+.+. +..
T Consensus 51 ~~~vv~aSsGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~----~~~~~~~~~~~l~~~~~~~ 125 (316)
T cd06448 51 CVHVVCSSGGNAGLAAAYAARK-LGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV----WWEADNYLREELAENDPGP 125 (316)
T ss_pred CCeEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc----hHHHHHHHHHHHHhccCCc
Confidence 3467777788888876665532 34 345555543334467788999999988632 101122333333332 245
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHH
Q 012124 231 LILCSPSNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 231 i~l~~p~nPtG~~~s~~~~~~l~~ 254 (470)
+++...+||.+..--..--.+|.+
T Consensus 126 ~~~~~~~n~~~~~g~~t~~~Ei~~ 149 (316)
T cd06448 126 VYVHPFDDPLIWEGHSSMVDEIAQ 149 (316)
T ss_pred EEeCCCCCchhhccccHHHHHHHH
Confidence 555444677654333223344444
No 485
>PRK03573 transcriptional regulator SlyA; Provisional
Probab=64.08 E-value=0.84 Score=38.21 Aligned_cols=30 Identities=7% Similarity=0.057 Sum_probs=27.9
Q ss_pred CCCCCccccCCcccc---ccccccccchhhhhh
Q 012124 25 AQIPGSVSFPSRYLH---NFNLNNDRRVLRVMA 54 (470)
Q Consensus 25 s~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~ 54 (470)
++.+||+.++++++| ..+.|+++|||+..+
T Consensus 48 t~~eLa~~l~~~~~tvt~~v~~Le~~GlV~r~~ 80 (144)
T PRK03573 48 SQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQT 80 (144)
T ss_pred CHHHHHHHhCCChhhHHHHHHHHHHCCCEeeec
Confidence 578999999999999 999999999998875
No 486
>PF13384 HTH_23: Homeodomain-like domain; PDB: 2X48_C.
Probab=63.74 E-value=0.69 Score=30.61 Aligned_cols=15 Identities=0% Similarity=-0.308 Sum_probs=12.3
Q ss_pred CCCCCccccCCcccc
Q 012124 25 AQIPGSVSFPSRYLH 39 (470)
Q Consensus 25 s~R~La~~l~vs~~T 39 (470)
|.+++|+.||||++|
T Consensus 19 s~~~ia~~lgvs~~T 33 (50)
T PF13384_consen 19 SIREIAKRLGVSRST 33 (50)
T ss_dssp -HHHHHHHHTS-HHH
T ss_pred CHHHHHHHHCcCHHH
Confidence 578999999999999
No 487
>PRK08265 short chain dehydrogenase; Provisional
Probab=63.56 E-value=57 Score=30.03 Aligned_cols=96 Identities=15% Similarity=0.065 Sum_probs=51.0
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc------CC
Q 012124 154 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EK 227 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~------~~ 227 (470)
...++||.|+...=..+.+.|.+.|..|++.+-.-.......+..+.++..++.|-. |.+.+++.++ .+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 345667766655555666777888988877654332333444455656666665432 4455544442 14
Q ss_pred ceEEEEcCC-CCCcccCCCHHHHHHHHH
Q 012124 228 SRLLILCSP-SNPTGSVYPKNLLDEIAR 254 (470)
Q Consensus 228 ~~~i~l~~p-~nPtG~~~s~~~~~~l~~ 254 (470)
...++.+.. ..+.+...+.+++++..+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 455544332 222333456555555443
No 488
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional
Probab=63.54 E-value=0.82 Score=38.31 Aligned_cols=32 Identities=0% Similarity=-0.192 Sum_probs=28.7
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
-++.+||+.++++++| +.+.|+++|||+..+.
T Consensus 55 ~t~~eLa~~l~i~~~tvsr~l~~Le~~GlI~R~~~ 89 (144)
T PRK11512 55 ITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPN 89 (144)
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccC
Confidence 3578999999999999 9999999999988753
No 489
>PRK00215 LexA repressor; Validated
Probab=63.53 E-value=1.1 Score=40.21 Aligned_cols=34 Identities=6% Similarity=-0.071 Sum_probs=30.2
Q ss_pred CCCCCCCCccccCC-cccc---ccccccccchhhhhhc
Q 012124 22 KIPAQIPGSVSFPS-RYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 22 ~lPs~R~La~~l~v-s~~T---Ay~~L~~~G~i~s~~g 55 (470)
.=||.++||+.+|+ |++| -.+.|+++|||+....
T Consensus 22 ~~~s~~ela~~~~~~~~~tv~~~l~~L~~~g~i~~~~~ 59 (205)
T PRK00215 22 YPPSRREIADALGLRSPSAVHEHLKALERKGFIRRDPG 59 (205)
T ss_pred CCCCHHHHHHHhCCCChHHHHHHHHHHHHCCCEEeCCC
Confidence 34889999999999 9999 7899999999988765
No 490
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=63.36 E-value=20 Score=29.12 Aligned_cols=56 Identities=11% Similarity=0.348 Sum_probs=43.8
Q ss_pred CEEEEecCcCCCCCccCHHhHhhhccCCceEEEE--cCC---CCCcccCCCHHHHHHHHHHHHhC
Q 012124 200 ATPVILPTRISENFLLDPKVLESKLTEKSRLLIL--CSP---SNPTGSVYPKNLLDEIARIVAKH 259 (470)
Q Consensus 200 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l--~~p---~nPtG~~~s~~~~~~l~~~~~~~ 259 (470)
.+++.+|.. + .+|++.+.+++......|++ +.| |+..|......+++.+-++..+.
T Consensus 29 vriIrvpC~--G--rv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~ 89 (124)
T PF02662_consen 29 VRIIRVPCS--G--RVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEEL 89 (124)
T ss_pred eEEEEccCC--C--ccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHc
Confidence 567777763 3 48999999999888887776 444 67899999988888888887776
No 491
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=63.04 E-value=75 Score=30.93 Aligned_cols=109 Identities=13% Similarity=0.125 Sum_probs=62.6
Q ss_pred CCcEEEecChHHHHHHHHHHhcCCCCeE--EEcCCCCC------ChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc
Q 012124 154 PDQILVSNGAKQSILQAVLAVCSPGDEV--IIPAPFWV------SYPEMARIADATPVILPTRISENFLLDPKVLESKLT 225 (470)
Q Consensus 154 ~~~i~it~g~~~al~~~~~~l~~~gd~V--lv~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 225 (470)
.|-|+..||+.....++..+.-.-|..+ +.-++.|. +...+++.+|.....+.+ |.+.+.+...
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 5678888999888876533322234433 34466665 234456668988877765 3344433221
Q ss_pred CCceEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEEeccccccccCC
Q 012124 226 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 277 (470)
Q Consensus 226 ~~~~~i~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~~~~~~ 277 (470)
...+ ...+|...+ .......+.++|+++ |+.+|.+....+-.|+|
T Consensus 132 ~~~~-----~~~~pc~~c-~~~~~~~l~~~A~~~-gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 132 AYFK-----KVGDPEWPQ-DHAIFASVYQVALKF-NIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHHh-----ccCCCchhh-hhHHHHHHHHHHHHh-CCCEEEeCCCHHHhcCC
Confidence 1111 222332222 234467888999999 99988876665544443
No 492
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=62.00 E-value=1.1e+02 Score=27.31 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=56.2
Q ss_pred CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEE
Q 012124 152 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 231 (470)
Q Consensus 152 ~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i 231 (470)
.....|+|..|+..|...+ +.|++.|-.|.|-+|....-...+...| ++..+.-. .+.+.+. . ..+
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~------~~~~dl~-----~-~~l 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLARC------FDADILE-----G-AFL 72 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeCC------CCHHHhC-----C-cEE
Confidence 3456888888888888754 5666788777777776653333333333 44444321 2333332 2 334
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE-Eecc
Q 012124 232 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL-SDEI 269 (470)
Q Consensus 232 ~l~~p~nPtG~~~s~~~~~~l~~~~~~~~~~~iI-~Dd~ 269 (470)
++..++++ +--+++.+.|++. ++++- .|+.
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~-~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARAR-GVPVNVVDDP 103 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHc-CCEEEECCCc
Confidence 44445443 2245789999998 88773 4554
No 493
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=61.09 E-value=33 Score=34.81 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=48.9
Q ss_pred CCCCChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhccCCceEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCEEE
Q 012124 186 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLV 264 (470)
Q Consensus 186 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~i~l~~p~n-PtG~~~s~~~~~~l~~~~~~~~~~~i 264 (470)
|+|++..++-..-..-++.+|.. .-++.++++.+.+++.+++.+-.. .+|.- ..+.-+++.++|+++ |+.|
T Consensus 53 ~~~~sl~~lp~~~Dlavi~vp~~------~~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~-girv 124 (447)
T TIGR02717 53 KAYPSVLEIPDPVDLAVIVVPAK------YVPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKY-GMRL 124 (447)
T ss_pred cccCCHHHCCCCCCEEEEecCHH------HHHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHc-CCEE
Confidence 45555554433333344444421 356777777777888877655433 23421 223347899999999 9999
Q ss_pred EEecccccccc
Q 012124 265 LSDEIYEHIIY 275 (470)
Q Consensus 265 I~Dd~~~~~~~ 275 (470)
+--.+.+.+..
T Consensus 125 lGPnc~G~~~~ 135 (447)
T TIGR02717 125 LGPNCLGIINT 135 (447)
T ss_pred EecCeeeEecC
Confidence 98887665443
No 494
>TIGR02337 HpaR homoprotocatechuate degradation operon regulator, HpaR. This Helix-Turn-Helix transcriptional regulator is a member of the MarR family (pfam01047) and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate.
Probab=60.41 E-value=1.1 Score=36.01 Aligned_cols=31 Identities=0% Similarity=-0.298 Sum_probs=28.0
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhh
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMA 54 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~ 54 (470)
.++.+||+.++++++| ..++|+++|||+..+
T Consensus 43 ~t~~ela~~~~~~~~tvs~~l~~Le~~GlI~r~~ 76 (118)
T TIGR02337 43 MEFTQLANQACILRPSLTGILARLERDGLVTRLK 76 (118)
T ss_pred cCHHHHHHHhCCCchhHHHHHHHHHHCCCEEecc
Confidence 3567999999999999 999999999999875
No 495
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=59.80 E-value=23 Score=33.43 Aligned_cols=26 Identities=0% Similarity=-0.436 Sum_probs=19.3
Q ss_pred CCCCCCccccCCcccc---ccccccccch
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRV 49 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~ 49 (470)
-|+++||+..|||.+| -...|=-+||
T Consensus 37 ~si~elA~~a~VS~aTv~Rf~~kLGf~Gf 65 (281)
T COG1737 37 LSIAELAERAGVSPATVVRFARKLGFEGF 65 (281)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCCCH
Confidence 4688999999999999 4455544444
No 496
>PF09012 FeoC: FeoC like transcriptional regulator; InterPro: IPR015102 This entry contains several transcriptional regulators, including FeoC, which contain a HTH motif. FeoC acts as a [Fe-S] dependent transcriptional repressor []. ; PDB: 1XN7_A 2K02_A.
Probab=59.72 E-value=0.69 Score=33.19 Aligned_cols=32 Identities=6% Similarity=-0.124 Sum_probs=26.3
Q ss_pred CCCCCCccccCCcccc---ccccccccchhhhhhc
Q 012124 24 PAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMAC 55 (470)
Q Consensus 24 Ps~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g 55 (470)
-|..+||..|++|+.+ ..++|+.+|+|+....
T Consensus 15 ~S~~eLa~~~~~s~~~ve~mL~~l~~kG~I~~~~~ 49 (69)
T PF09012_consen 15 VSLAELAREFGISPEAVEAMLEQLIRKGYIRKVDM 49 (69)
T ss_dssp EEHHHHHHHTT--HHHHHHHHHHHHCCTSCEEEEE
T ss_pred cCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEecC
Confidence 4678999999999999 9999999999987653
No 497
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=59.51 E-value=1.8 Score=39.77 Aligned_cols=38 Identities=3% Similarity=-0.174 Sum_probs=31.5
Q ss_pred CCCCCCCccccCCcccc---ccccccccchhhhhhcCCCccc
Q 012124 23 IPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMACSGVEEV 61 (470)
Q Consensus 23 lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~g~sG~~V 61 (470)
--+..+||+.|+||..| -..+|+++|.|....| .++++
T Consensus 18 ~~~~~eLa~~l~VS~~TiRRdL~~L~~~~~l~r~~G-ga~~~ 58 (240)
T PRK10411 18 SLTTEALAEQLNVSKETIRRDLNELQTQGKILRNHG-RAKYI 58 (240)
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEecC-eEEEe
Confidence 45678999999999999 8888999999988766 56554
No 498
>COG1339 Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism]
Probab=59.18 E-value=1.4 Score=38.16 Aligned_cols=41 Identities=5% Similarity=-0.059 Sum_probs=34.1
Q ss_pred CCCCCCCCCccccCCcccc---ccccccccchhhhhh-cCCCccccc
Q 012124 21 SKIPAQIPGSVSFPSRYLH---NFNLNNDRRVLRVMA-CSGVEEVQV 63 (470)
Q Consensus 21 ~~lPs~R~La~~l~vs~~T---Ay~~L~~~G~i~s~~-g~sG~~V~~ 63 (470)
.+++ +++||+.|++|..| -..+|+++|+|+... . .|+++..
T Consensus 18 ~~~t-~~ela~~l~~S~qta~R~l~~le~~~~I~R~~~~-~Gq~i~i 62 (214)
T COG1339 18 VKVT-SSELAKRLGVSSQTAARKLKELEDEGYITRTISK-RGQLITI 62 (214)
T ss_pred cccc-HHHHHHHhCcCcHHHHHHHHhhccCCcEEEEecC-CCcEEEe
Confidence 4555 78999999999999 788999999998766 5 7888743
No 499
>PRK04296 thymidine kinase; Provisional
Probab=59.12 E-value=36 Score=29.91 Aligned_cols=94 Identities=11% Similarity=0.106 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCC---ChHHHHHHcCCEEEEecCcCCCCCccCHHhHhhhcc---CCceEEEEcCCCC
Q 012124 165 QSILQAVLAVCSPGDEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSN 238 (470)
Q Consensus 165 ~al~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~---~~~~~i~l~~p~n 238 (470)
.++..+ ..+...|..|++..|.+. ....++...|..+..+.. ...+++.+.+. .+..+|++-..|
T Consensus 18 ~~l~~~-~~~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq- 88 (190)
T PRK04296 18 ELLQRA-YNYEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ- 88 (190)
T ss_pred HHHHHH-HHHHHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc-
Confidence 444444 344456888887766322 233344555544332221 12233333332 256778776664
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEEeccccc
Q 012124 239 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 272 (470)
Q Consensus 239 PtG~~~s~~~~~~l~~~~~~~~~~~iI~Dd~~~~ 272 (470)
.++.+++.++++.++.. ++.||.=.-..+
T Consensus 89 ----~l~~~~v~~l~~~l~~~-g~~vi~tgl~~~ 117 (190)
T PRK04296 89 ----FLDKEQVVQLAEVLDDL-GIPVICYGLDTD 117 (190)
T ss_pred ----cCCHHHHHHHHHHHHHc-CCeEEEEecCcc
Confidence 36777788899998888 887776554444
No 500
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=59.11 E-value=1.4e+02 Score=28.14 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=36.1
Q ss_pred CcEEEecChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCc
Q 012124 155 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 208 (470)
Q Consensus 155 ~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 208 (470)
..|+..+++.++..++..+- ++-.-.|+++.-.-..-...++.+|++++.++-.
T Consensus 54 ~~vv~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 45777788888877666553 2222455665544455667889999999998853
Done!