BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012126
(470 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/478 (70%), Positives = 401/478 (83%), Gaps = 16/478 (3%)
Query: 3 QRAFLRSSKIVTTVTGAVTFPPKT--------PSLIFCYSSS---SQESPSSPEQQQESS 51
+ FL + KI+ T PP+T P +F YSSS Q+ E
Sbjct: 2 HKPFLVTCKILLLTT-----PPRTRTVPILPKPQSLFFYSSSPHHHQQHKRELEPSDSHP 56
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
+N+KSPIGSP RVQKLIASQSDPLLAKEIFDYASRQPNF+HS S+YLILILKLGRAKYF
Sbjct: 57 NANTKSPIGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYF 116
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
S IDD+L LKS++YPVTP+LF+Y+I IY E+NLPD+ALK F ++L+F+C P PK LN I
Sbjct: 117 SFIDDLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGI 176
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
LE+LV+H+NY++PAFDLFK AH + V PNTKSYNI++RAFC NG IS+AY+LFN+MF+R
Sbjct: 177 LEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRD 236
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
VMPDVESYRILMQ LCRKSQVN AVDLLEDMLNKG+VPD LSYTTLLNSLCRKKKLREAY
Sbjct: 237 VMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAY 296
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
KLLCRMKVKGCNPDI+HYNTV+LGFCREGRA+DACKVLEDM SNGC+PNLVSYRTLVGGL
Sbjct: 297 KLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGL 356
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
CDQGMFD AK +++ M+ KGFSPHF+VS+ALIKGFCNVGK++EACGV+EELLK GEAPH
Sbjct: 357 CDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHT 416
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469
+TWVM+V +IC ++++++GE+L+++ KVE+KGDTRIVEAGIGLE+YLI +T+ + R
Sbjct: 417 ETWVMMVSRICEVDDLQRIGEILDKVKKVELKGDTRIVEAGIGLEEYLIKRTQQKAWR 474
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/413 (76%), Positives = 365/413 (88%), Gaps = 1/413 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDI 117
PIGSP RVQKLIASQSDPLLAKEIFDYAS QPNFRH+ STYLILILK GR+K+FSL+DD+
Sbjct: 38 PIGSPTRVQKLIASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDL 97
Query: 118 LITLKSEH-YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
L LKSE P+TP+LF+YLIKIY E+NLPD+AL TF ML+FN KPL K LNRIL++LV
Sbjct: 98 LRRLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILV 157
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+HRNYLRPAFDLFK AHKHGV P+TKSYNI+MRAFC NGDISIAYTLFNKMF+R V+PD+
Sbjct: 158 SHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDI 217
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+SYRILMQ LCRKSQVN AVDL EDMLNKGFVPD+ +YTTLLNSLCRKKKLREAYKLLCR
Sbjct: 218 QSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCR 277
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
MKVKGCNPDIVHYNTV+LGFCREGRA DACKV++DM +NGCLPNLVSYRTLV GLC GM
Sbjct: 278 MKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGM 337
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A KY++ M+SKGFSPHF+V HAL+KGFCNVG+++EACGVL + L+ EAPH+DTW++
Sbjct: 338 LDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMI 397
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469
IVPQIC ++ K+ VL E++K+EIKGDTRIV+AGIGLEDYLI K R++ R+
Sbjct: 398 IVPQICEVDDGVKIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIRAKSRQ 450
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/414 (73%), Positives = 362/414 (87%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
SPIGSP RVQKLIASQSDPLLAKEIFD AS QPNF+HS S++ ILILKLG A+ FSL+ D
Sbjct: 9 SPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQD 68
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L+ LKSE Y + PSLF+ +I+IY E+NLPD+ALKTF SML+F+ KPLPK LN +L+LLV
Sbjct: 69 LLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLV 128
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+HRNY+RPAFDLFKSAH++GV P+TKSYNI+M AFCFNGD+SIAYTLFN+MF+R V PDV
Sbjct: 129 SHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDV 188
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
ESYRILMQGLCRKSQVNRAVDLLEDMLNKG+VPD LSYTTLLNSLCRKKKL+EAYKLLCR
Sbjct: 189 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCR 248
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
MKVKGCNPDIVHYNTV+LGFCREGR +DACKVLEDMPSNGC PNL+SY TLV GLCDQG+
Sbjct: 249 MKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGL 308
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+D AK Y++ M+SKGFSPHFSV HALI GFCNVGK++EAC VL E+L+ GEA H +TWV
Sbjct: 309 YDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVA 368
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRRT 470
I+P+IC +++ ++ + +E +K+EI +TR+VEAGIGLE+Y+I K R + R+
Sbjct: 369 IIPRICEVDKLVRMENIFDEXLKLEITPNTRLVEAGIGLEEYVIRKVRDKSRKA 422
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 295/440 (67%), Positives = 355/440 (80%), Gaps = 7/440 (1%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+T P T S YSSS E+ ++ +SN KSPIGSP RVQKLIASQSDPLLAK
Sbjct: 16 LTSPLSTSSRFLFYSSSEHEA-------RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAK 68
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
EIFDYAS+QPNFRHS S++LILILKLGR +YF+LIDD+L +S YP+T +FTYLIK+
Sbjct: 69 EIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV 128
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YAE+ LP++ L TF MLEFN P PK LNRIL++LV+HR YL+ AF+LFKS+ HGV+P
Sbjct: 129 YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP 188
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
NT+SYN++M+AFC N D+SIAY LF KM ER V+PDV+SY+IL+QG CRK QVN A++LL
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+DMLNKGFVPD LSYTTLLNSLCRK +LREAYKLLCRMK+KGCNPD+VHYNT++LGFCRE
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
RA+DA KVL+DM SNGC PN VSYRTL+GGLCDQGMFD KKY++ MISKGFSPHFSVS
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 368
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ L+KGFC+ GKV+EAC V+E ++K GE H DTW M++P IC +E EK+ L + VK
Sbjct: 369 NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVK 428
Query: 440 VEIKGDTRIVEAGIGLEDYL 459
EI GDTRIV+ GIGL YL
Sbjct: 429 EEITGDTRIVDVGIGLGSYL 448
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 295/411 (71%), Positives = 355/411 (86%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
IGSPCRVQKLIASQSDPLLAKEIFDYA RQP+FR S+S+ L+LILKLGR+KYFSLIDD+L
Sbjct: 70 IGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRSKYFSLIDDLL 129
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++ KS YPVTP+ F+Y+IKIY E++LPD+ALK F +M++F C P KQLNRILE+LV+H
Sbjct: 130 LSFKSRRYPVTPTAFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSH 189
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
RN++RPAFDLFK+A HGVLPNTKSYNI++RAFC+NG+ISIAYTLFNKMFER V+PDVE+
Sbjct: 190 RNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVET 249
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
YR LMQGLCRK+QVN AVDLLEDMLNKG++PDTLSY TLLNSLCRKKKLREAYKLLCRMK
Sbjct: 250 YRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMK 309
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
VKGCNPDI HYNTV++GFCREGRA+DACK+LEDM SNGCLPNLVSY +L GLCDQGMF+
Sbjct: 310 VKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFE 369
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+AK Y++ M KGF PHFSV HAL+KGF ++G++ E+C VLE++LK G+APH DTW +I+
Sbjct: 370 LAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIII 429
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469
IC E+ K EV +I+K +++ DTRIVEAG GL +YLI K ++ R
Sbjct: 430 SGICEVEDTAKFCEVWEKILKKDVRRDTRIVEAGTGLGEYLIRKLQASISR 480
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/455 (65%), Positives = 361/455 (79%), Gaps = 12/455 (2%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+T P T S YSSS E+ ++ +SN KSPIGSP RVQKLIASQSDPLLAK
Sbjct: 16 LTSPLSTSSRFLFYSSSEHEA-------RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAK 68
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
EIFDYAS+QPNFRHS S++LILILKLGR +YF+LIDD+L +S YP+T +FTYLIK+
Sbjct: 69 EIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV 128
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YAE+ LP++ L TF MLEFN P PK LNRIL++LV+HR YL+ AF+LFKS+ HGV+P
Sbjct: 129 YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP 188
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
NT+SYN++M+AFC N D+SIAY LF KM ER V+PDV+SY+IL+QG CRK QVN A++LL
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+DMLNKGFVPD LSYTTLLNSLCRK +LREAYKLLCRMK+KGCNPD+VHYNT++LGFCRE
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
RA+DA KVL+DM SNGC PN VSYRTL+GGLCDQGMFD KKY++ MISKGFSPHFSVS
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 368
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ L+KGFC+ GKV+EAC V+E ++K GE H DTW M++P IC +E EK+ L + VK
Sbjct: 369 NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVK 428
Query: 440 VEIKGDTRIVEAGIGLEDYLIGKTR-----SRPRR 469
EI GDTRIV+ GIGL YL K + +R RR
Sbjct: 429 EEITGDTRIVDVGIGLGSYLSSKLQMKRKNARERR 463
>gi|297810021|ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318731|gb|EFH49153.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1162
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/426 (60%), Positives = 311/426 (73%), Gaps = 40/426 (9%)
Query: 37 SQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNS 96
S+ P+ S + KSPIGSP RVQKLIASQSDPLLAKEIFDYAS+QPNFRHS S
Sbjct: 28 SEHKAGEPKASALVSNPSPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSQS 87
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+YLILILKLGRA+YF+LIDD+L +S YP+T +FTYLIK+YAE+ +P++ L+TF M
Sbjct: 88 SYLILILKLGRARYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKIPEKVLRTFYKM 147
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LEFN P PK LNRILE+LV+HR YL+ AF+LFKS+ HGV+PNT+SYNI+M+AFC N D
Sbjct: 148 LEFNFTPQPKHLNRILEVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNILMQAFCLNDD 207
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+SIAY LF KM ER V+PDVESY+IL++G CRK QVN A++LLEDMLNKGFVPD LS
Sbjct: 208 LSIAYQLFGKMLERDVVPDVESYKILIKGFCRKGQVNGAMELLEDMLNKGFVPDRLS--- 264
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
CNPD+VHYNT++LGFCRE RA+DA KVL+DM
Sbjct: 265 -------------------------CNPDLVHYNTIILGFCREDRAMDARKVLDDM---- 295
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
TL+GGLCDQGMFD KKY+Q MISKGFSPHFSVS+ L+KGFC+ GKV+EAC
Sbjct: 296 --------LTLIGGLCDQGMFDEGKKYLQEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 347
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
V+E ++K GE H DTW MI+P IC +E EK+ L + VK EI GDTRIV+ GIGL
Sbjct: 348 DVVEVVMKNGEILHSDTWEMIIPLICKEDESEKIKRFLEDAVKEEITGDTRIVDVGIGLG 407
Query: 457 DYLIGK 462
YL K
Sbjct: 408 SYLSSK 413
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/368 (56%), Positives = 270/368 (73%), Gaps = 1/368 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P RV KLIASQ+D LLA EIF+ ASRQP F+HS STY LI KLGRA+ F ++ ++
Sbjct: 99 TPARVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQ 158
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++ + P TP LF +I+IY E +P+ A+K F MLEF +PL K N +L +L+ H+
Sbjct: 159 MRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHK- 217
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A LFK H+ G+ PNT++YNI++RA C + +S AY LFNKM ++G +PDVE+Y
Sbjct: 218 CLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYS 277
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
ILMQGLCRKSQV A+ +L++MLNKG+VPD L+Y TLLNSLCRK LREAY+LL +MKV
Sbjct: 278 ILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVM 337
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GCNPD+++YNTV+ GFCREGRA+DAC++L DMP NGCLPN +SYRTLV GLC++G FD A
Sbjct: 338 GCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEA 397
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K +++ MIS GF PH S+ H LI G CN GKV EAC VL + K APHE TW +++ +
Sbjct: 398 KDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMR 457
Query: 421 ICAGEEME 428
IC + E
Sbjct: 458 ICEDSQTE 465
>gi|255548041|ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545557|gb|EEF47061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 262
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/261 (73%), Positives = 226/261 (86%)
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
MRA C G++S+AY LFN+MF+R V+PD+ESYRILMQGLCR+SQVN AV LLEDMLNKGF
Sbjct: 1 MRALCLTGELSVAYKLFNQMFKRDVLPDIESYRILMQGLCRRSQVNGAVGLLEDMLNKGF 60
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD L+YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT++ GFCREGRA+DA K
Sbjct: 61 VPDCLTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARK 120
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL DM NGCLPNLVSYRTLV G+CDQGMFD AK Y++ MI KGFSPHFSVSHAL+KGFC
Sbjct: 121 VLGDMECNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALVKGFC 180
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
VGK++EACGV+E LLK GE PH DTW++I+P+IC +++E + + L++ + VEI GDTR
Sbjct: 181 IVGKIEEACGVVEVLLKHGEVPHADTWIIILPRICEVDDLEGIRQSLDKAMMVEIMGDTR 240
Query: 448 IVEAGIGLEDYLIGKTRSRPR 468
IVEAGIGLEDYLI K + + R
Sbjct: 241 IVEAGIGLEDYLIKKAQPKWR 261
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A K F M + + P + RIL + R+ + A L + G +P+ +Y ++
Sbjct: 13 AYKLFNQMFKRDVLP-DIESYRILMQGLCRRSQVNGAVGLLEDMLNKGFVPDCLTYTTLL 71
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C + AY L +M +G PD+ Y ++ G CR+ + A +L DM G +
Sbjct: 72 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARKVLGDMECNGCL 131
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ +SY TL+ +C + EA L M +KG +P + +V GFC G+ +AC V
Sbjct: 132 PNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKIEEACGV 191
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCD 353
+E + +G +P+ ++ ++ +C+
Sbjct: 192 VEVLLKHGEVPHADTWIIILPRICE 216
>gi|296089012|emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/367 (55%), Positives = 260/367 (70%), Gaps = 13/367 (3%)
Query: 3 QRAFLRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSP 62
R L S + + P+TP YSSS+ + +Q+ SPIGSP
Sbjct: 4 HRVLLHSYRTAMAAPFHLVLLPRTPWRTL-YSSSTHQQQQHQHKQEPHV---KPSPIGSP 59
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
RVQKLIASQSDPLLAKEIFD AS QPNF+HS S++ ILILKLG A+ FSL+ D+L+ LK
Sbjct: 60 SRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLK 119
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
SE Y + PSLF+ +I+IY E+NLPD+ALKTF SML+F+ KPLPK LNR+L+LLV+HRNY+
Sbjct: 120 SEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSHRNYI 179
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
RPAFDLFKSAH++GV P+TKSYNI+M AFCFNGD+SIAYTLFN+MF+R V PDVESYRIL
Sbjct: 180 RPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRIL 239
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
MQGLCRKSQVNRAVDLLEDMLNKG+VPD LSYTT LC + EA + M KG
Sbjct: 240 MQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTF--GLCDQGLYDEAKNYVEEMLSKGF 297
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-------QG 355
+ ++ ++ GFC G+ +AC+VL +M +G P+ ++ ++ +C+ +
Sbjct: 298 SLHFSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICEVDKLVRMEN 357
Query: 356 MFDVAKK 362
+FD A K
Sbjct: 358 IFDEALK 364
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 143/218 (65%), Gaps = 2/218 (0%)
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
R+L + ++ + A DL + G PDT SY L+++ C L AY L +M
Sbjct: 167 RLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFK 226
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ PD+ Y ++ G CR+ + A +LEDM + G +P+ +SY T GLCDQG++D
Sbjct: 227 RDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTF--GLCDQGLYDE 284
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK Y++ M+SKGFS HFSV HALI GFCNVGK++EAC VL E+L+ GEAPH +TWV I+P
Sbjct: 285 AKNYVEEMLSKGFSLHFSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIP 344
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
+IC +++ ++ + +E +K+EI +TR+VEAGIGLE+
Sbjct: 345 RICEVDKLVRMENIFDEALKLEITPNTRLVEAGIGLEE 382
>gi|359489475|ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/313 (61%), Positives = 241/313 (76%), Gaps = 11/313 (3%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
SPIGSP RVQKLIASQSDPLLAKEIFD AS QPNF+HS S++ ILILKLG A+ FSL+ D
Sbjct: 40 SPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQD 99
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L+ LKSE Y + PSLF+ +I+IY E+NLPD+ALKTF SML+F+ KPLPK LNR+L+LLV
Sbjct: 100 LLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLV 159
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+HRNY+RPAFDLFKSAH++GV P+TKSYNI+M AFCFNGD+SIAYTLFN+MF+R V PDV
Sbjct: 160 SHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDV 219
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
ESYRILMQGLCRKSQVNRAVDLLEDMLNKG+VPD TL++ LC + EA +
Sbjct: 220 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPD----ATLVSGLCDQGLYDEAKNYVEE 275
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD--- 353
M KG + ++ ++ GFC G+ +AC+VL +M +G P+ ++ ++ +C+
Sbjct: 276 MLSKGFSLHFSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICEVDK 335
Query: 354 ----QGMFDVAKK 362
+ +FD A K
Sbjct: 336 LVRMENIFDEALK 348
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 144/220 (65%), Gaps = 4/220 (1%)
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
R+L + ++ + A DL + G PDT SY L+++ C L AY L +M
Sbjct: 153 RLLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFK 212
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ PD+ Y ++ G CR+ + A +LEDM + G +P+ TLV GLCDQG++D
Sbjct: 213 RDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPD----ATLVSGLCDQGLYDE 268
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK Y++ M+SKGFS HFSV HALI GFCNVGK++EAC VL E+L+ GEAPH +TWV I+P
Sbjct: 269 AKNYVEEMLSKGFSLHFSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIP 328
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYL 459
+IC +++ ++ + +E +K+EI +TR+VEAGIGLE+Y+
Sbjct: 329 RICEVDKLVRMENIFDEALKLEITPNTRLVEAGIGLEEYM 368
>gi|356504195|ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
[Glycine max]
Length = 1114
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/357 (56%), Positives = 258/357 (72%), Gaps = 18/357 (5%)
Query: 3 QRAFLRSSKIVTTVT------GAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSK 56
RAF+RS +++ + G + P P ++ Y QE+ S SS ++
Sbjct: 2 HRAFVRSKTLISVASNRISSSGPTSLNPWQP--LYLYRQKQQEASHS------SSCNSGN 53
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
+P GSP RVQKLIASQSDPLLAKEIFD ASRQP FRH+ S+YLIL+LKLGR+K+FSL+DD
Sbjct: 54 TPFGSPTRVQKLIASQSDPLLAKEIFDLASRQPKFRHTYSSYLILLLKLGRSKHFSLLDD 113
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L LK + +P+TP+LFTYLIK+YAE++LPD+AL +F ++L FNCKPLPK LNRILE+LV
Sbjct: 114 LLRRLKFDSHPITPTLFTYLIKVYAEADLPDKALNSFYTILHFNCKPLPKHLNRILEVLV 173
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+HRN++RPAF LFK AH++GV P+TKSYNI+MRAFC NGDIS+AY+LFNKMF+R ++PD+
Sbjct: 174 SHRNFIRPAFYLFKDAHRYGVEPDTKSYNILMRAFCLNGDISVAYSLFNKMFKRDLVPDI 233
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
ESYRILMQ LCRKSQVN AVDLLEDMLNKGFVPD TL++ LC L EA K +
Sbjct: 234 ESYRILMQALCRKSQVNGAVDLLEDMLNKGFVPD----RTLVSGLCDMGMLDEASKYVEE 289
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M +P + +V GFC GR DAC VL +G P+L ++ ++ +C+
Sbjct: 290 MLSIDFSPHFAVVHALVKGFCNVGRVEDACGVLTKALEHGEAPHLDTWMAIMPVICE 346
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 4/214 (1%)
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
RIL + ++ + A L +D G PDT SY L+ + C + AY L +M
Sbjct: 167 RILEVLVSHRNFIRPAFYLFKDAHRYGVEPDTKSYNILMRAFCLNGDISVAYSLFNKMFK 226
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ PDI Y ++ CR+ + A +LEDM + G +P+ RTLV GLCD GM D
Sbjct: 227 RDLVPDIESYRILMQALCRKSQVNGAVDLLEDMLNKGFVPD----RTLVSGLCDMGMLDE 282
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A KY++ M+S FSPHF+V HAL+KGFCNVG+V++ACGVL + L+ GEAPH DTW+ I+P
Sbjct: 283 ASKYVEEMLSIDFSPHFAVVHALVKGFCNVGRVEDACGVLTKALEHGEAPHLDTWMAIMP 342
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
IC ++ K+ L E++K+EIKG TRIV+ GI
Sbjct: 343 VICEVDDDGKISGALEEVLKIEIKGHTRIVDVGI 376
>gi|240255715|ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
gi|332656619|gb|AEE82019.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1110
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 244/346 (70%), Gaps = 11/346 (3%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+T P T S YSSS E+ ++ +SN KSPIGSP RVQKLIASQSDPLLAK
Sbjct: 16 LTSPLSTSSRFLFYSSSEHEA-------RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAK 68
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
EIFDYAS+QPNFRHS S++LILILKLGR +YF+LIDD+L +S YP+T +FTYLIK+
Sbjct: 69 EIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV 128
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YAE+ LP++ L TF MLEFN P PK LNRIL++LV+HR YL+ AF+LFKS+ HGV+P
Sbjct: 129 YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP 188
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
NT+SYN++M+AFC N D+SIAY LF KM ER V+PDV+SY+IL+QG CRK QVN A++LL
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+DMLNKGFVPD TL+ LC + E K L M KG +P N +V GFC
Sbjct: 249 DDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 304
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
G+ +AC V+E + NG + ++ ++ +C++ + K +++
Sbjct: 305 GKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 350
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 146/231 (63%), Gaps = 5/231 (2%)
Query: 224 FNKMFERGVMPDVESY-RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
F KM E P + RIL + + + +A +L + G +P+T SY L+ + C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
L AY+L +M + PD+ Y ++ GFCR+G+ A ++L+DM + G +P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-- 259
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
RTL+GGLCDQGMFD KKY++ MISKGFSPHFSVS+ L+KGFC+ GKV+EAC V+E +
Sbjct: 260 --RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVV 317
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+K GE H DTW M++P IC +E EK+ L + VK EI GDTRIV+ GI
Sbjct: 318 MKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGI 368
>gi|7267637|emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
Length = 1117
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 244/346 (70%), Gaps = 11/346 (3%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+T P T S YSSS E+ ++ +SN KSPIGSP RVQKLIASQSDPLLAK
Sbjct: 16 LTSPLSTSSRFLFYSSSEHEA-------RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAK 68
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
EIFDYAS+QPNFRHS S++LILILKLGR +YF+LIDD+L +S YP+T +FTYLIK+
Sbjct: 69 EIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV 128
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YAE+ LP++ L TF MLEFN P PK LNRIL++LV+HR YL+ AF+LFKS+ HGV+P
Sbjct: 129 YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP 188
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
NT+SYN++M+AFC N D+SIAY LF KM ER V+PDV+SY+IL+QG CRK QVN A++LL
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+DMLNKGFVPD TL+ LC + E K L M KG +P N +V GFC
Sbjct: 249 DDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 304
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
G+ +AC V+E + NG + ++ ++ +C++ + K +++
Sbjct: 305 GKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 350
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 150/237 (63%), Gaps = 5/237 (2%)
Query: 224 FNKMFERGVMPDVESY-RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
F KM E P + RIL + + + +A +L + G +P+T SY L+ + C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
L AY+L +M + PD+ Y ++ GFCR+G+ A ++L+DM + G +P+
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-- 259
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
RTL+GGLCDQGMFD KKY++ MISKGFSPHFSVS+ L+KGFC+ GKV+EAC V+E +
Sbjct: 260 --RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVV 317
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYL 459
+K GE H DTW M++P IC +E EK+ L + VK EI GDTRIV+ GIGL YL
Sbjct: 318 MKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYL 374
>gi|52075946|dbj|BAD46026.1| PPR-protein-like [Oryza sativa Japonica Group]
Length = 629
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 220/370 (59%), Gaps = 11/370 (2%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
R+ KL+ SQSDPLLA E+ + P ST L L+L R + + L L+
Sbjct: 68 RLHKLVTSQSDPLLALELVTVTA--PTTAPHPSTLHALALRLSRRREH--LPHALALLRR 123
Query: 124 EHYPVTPSLFTYLIKIYAESNL-PDRALKTFRSML---EFNCKPLPKQLNRILELLVTHR 179
P +P + L+ P L TF S+ P+ L R+L +L +
Sbjct: 124 LPSPPSPRILLPLLLSALRLRRQPHLFLSTFNSLFVSGPSPLPLHPELLLRLLSVLSSTA 183
Query: 180 NYLRPAFDLFKSAHKHGVLPNT---KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+Y A L + LP S+N+++ A +G ++++ +LF+++ V P+
Sbjct: 184 SYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNA 243
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
E+YRIL Q LCR+ QV+ A LL++ML++G D L+YTT+LN+LCRKK+LREAY+LLC
Sbjct: 244 ETYRILTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCL 303
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ +G +PDIVHYNTV++G CREGR +DACKV DM +GC PN V+Y +V GLC G+
Sbjct: 304 MRGRGVSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGL 363
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+D A+ Y+ M+ KG PHFSV H++IKG C VGKV+EA G++ +L G PH +TW
Sbjct: 364 YDKAEAYLDDMLGKGLLPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSS 423
Query: 417 IVPQICAGEE 426
++ +C+ E+
Sbjct: 424 VIRSVCSDED 433
>gi|297727181|ref|NP_001175954.1| Os09g0532800 [Oryza sativa Japonica Group]
gi|255679084|dbj|BAH94682.1| Os09g0532800, partial [Oryza sativa Japonica Group]
Length = 519
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 220/370 (59%), Gaps = 11/370 (2%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
R+ KL+ SQSDPLLA E+ + P ST L L+L R + + L L+
Sbjct: 23 RLHKLVTSQSDPLLALELVTVTA--PTTAPHPSTLHALALRLSRRREH--LPHALALLRR 78
Query: 124 EHYPVTPSLFTYLIKIYAESNL-PDRALKTFRSML---EFNCKPLPKQLNRILELLVTHR 179
P +P + L+ P L TF S+ P+ L R+L +L +
Sbjct: 79 LPSPPSPRILLPLLLSALRLRRQPHLFLSTFNSLFVSGPSPLPLHPELLLRLLSVLSSTA 138
Query: 180 NYLRPAFDLFKSAHKHGVLPN---TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+Y A L + LP S+N+++ A +G ++++ +LF+++ V P+
Sbjct: 139 SYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNA 198
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
E+YRIL Q LCR+ QV+ A LL++ML++G D L+YTT+LN+LCRKK+LREAY+LLC
Sbjct: 199 ETYRILTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCL 258
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ +G +PDIVHYNTV++G CREGR +DACKV DM +GC PN V+Y +V GLC G+
Sbjct: 259 MRGRGVSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGL 318
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+D A+ Y+ M+ KG PHFSV H++IKG C VGKV+EA G++ +L G PH +TW
Sbjct: 319 YDKAEAYLDDMLGKGLLPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSS 378
Query: 417 IVPQICAGEE 426
++ +C+ E+
Sbjct: 379 VIRSVCSDED 388
>gi|222641973|gb|EEE70105.1| hypothetical protein OsJ_30115 [Oryza sativa Japonica Group]
Length = 522
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 215/369 (58%), Gaps = 30/369 (8%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
R+ KL+ SQSDPLLA E+ + P ST L L+L R +
Sbjct: 15 RLHKLVTSQSDPLLALELVTVTA--PTTAPHPSTLHALALRLSR--------------RR 58
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML---EFNCKPLPKQLNRILELLVTHRN 180
EH P +L P L TF S+ P+ L R+L +L + +
Sbjct: 59 EHLPHALALL--------RRPPPHLFLSTFNSLFVSGPSPLPLHPELLLRLLSVLSSTAS 110
Query: 181 YLRPAFDLFKSAHKHGVLPN---TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
Y A L + LP S+N+++ A +G ++++ +LF+++ V P+ E
Sbjct: 111 YFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNAE 170
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+YRIL Q LCR+ QV+ A LL++ML++G D L+YTT+LN+LCRKK+LREAY+LLC M
Sbjct: 171 TYRILTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLM 230
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ +G +PDIVHYNTV++G CREGR +DACKV DM +GC PN V+Y +V GLC G++
Sbjct: 231 RGRGVSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGLY 290
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A+ Y+ M+ KG PHFSV H++IKG C VGKV+EA G++ +L G PH +TW +
Sbjct: 291 DKAEAYLDDMLGKGLLPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSSV 350
Query: 418 VPQICAGEE 426
+ +C+ E+
Sbjct: 351 IRSVCSDED 359
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 255 AVDLLEDMLNKGFVPDTL---SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ LL D+ + +P+ L S+ L+ + R L + L R++ +P+ Y
Sbjct: 115 ALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHRLRSLHVSPNAETYRI 174
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ CR G+ A +L++M G + ++Y T++ LC + A + + LM +G
Sbjct: 175 LTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRG 234
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP + +I G C G+ +AC V ++ ++G AP+ T+ +V +C +K
Sbjct: 235 VSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTAVVNGLCVNGLYDKAE 294
Query: 432 EVLNEIV 438
L++++
Sbjct: 295 AYLDDML 301
>gi|125606425|gb|EAZ45461.1| hypothetical protein OsJ_30113 [Oryza sativa Japonica Group]
Length = 422
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 215/370 (58%), Gaps = 11/370 (2%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
R+ KL+ SQ DPLLA E+ + P ST L L+L R + + L L+
Sbjct: 15 RLHKLVTSQPDPLLALELVTVTA--PTTAPHPSTLHALALRLSRRREH--LPHALALLRR 70
Query: 124 EHYPVTPSLFTYLIKIYAESNL-PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR--- 179
P +P + L+ P L TF S+ PLP +L LL
Sbjct: 71 LPSPPSPRILLPLLLSALRLRRQPHLFLSTFNSLFVSGSSPLPLHPELLLRLLSVLSSTA 130
Query: 180 NYLRPAFDLFKSAHKHGVLPNT---KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+Y A L + LP S+N+++ A +G ++++ +LF+++ V P+
Sbjct: 131 SYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAAARSGHLAVSISLFHRLRSLHVSPNA 190
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
E+YRIL Q LCR+ QV A +LL++ML++G D L+YTT+LN+LCRKK+LREAY+LLC
Sbjct: 191 ETYRILTQSLCRRGQVRTAANLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCL 250
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ + +PDIVHYNTV++G CREGR +DACKV DM +GC PN V+Y +V LC G+
Sbjct: 251 MRGREVSPDIVHYNTVIVGMCREGRPLDACKVFRDMRESGCAPNAVAYTAVVNRLCVSGL 310
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+D A+ Y+ M+ KG PHFSV H++IKG C VGKV+EA G++ +L G PH +TW
Sbjct: 311 YDKAEAYLDDMLGKGLLPHFSVFHSVIKGCCAVGKVNEAAGMMTRMLDLGMVPHAETWSS 370
Query: 417 IVPQICAGEE 426
++ +C+ E+
Sbjct: 371 VIRSVCSDED 380
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 255 AVDLLEDMLNKGFVPDTL---SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ LL D+ + +P+ L S+ L+ + R L + L R++ +P+ Y
Sbjct: 136 ALHLLRDVSTRLPLPEPLVLASHNLLIEAAARSGHLAVSISLFHRLRSLHVSPNAETYRI 195
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ CR G+ A +L++M G + ++Y T++ LC + A + + LM +
Sbjct: 196 LTQSLCRRGQVRTAANLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRE 255
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP + +I G C G+ +AC V ++ ++G AP+ + +V ++C +K
Sbjct: 256 VSPDIVHYNTVIVGMCREGRPLDACKVFRDMRESGCAPNAVAYTAVVNRLCVSGLYDKAE 315
Query: 432 EVLNEIV 438
L++++
Sbjct: 316 AYLDDML 322
>gi|226530647|ref|NP_001146846.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Zea mays]
gi|194699540|gb|ACF83854.1| unknown [Zea mays]
gi|195604202|gb|ACG23931.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Zea mays]
gi|414886441|tpg|DAA62455.1| TPA: peptidase S8 and S53, subtilisin, kexin, sedolisin [Zea mays]
Length = 401
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 163/224 (72%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
S+N+++ A +G ++++ +LF+++ V PD ++YRIL Q LCRK+QV A LL++M
Sbjct: 154 SHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAATLLDEM 213
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G D L+YTT+LN+LCRKK+LREAY+LLC M+ +G +PDIVHYNTV++G CREGR
Sbjct: 214 LHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRP 273
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+DACKV+ DM NGC PN V+Y T+V GLC G++D A+ Y+ M+ KG PHFSV H++
Sbjct: 274 LDACKVVVDMMDNGCTPNAVTYGTVVNGLCVSGLYDKAEAYLVDMVGKGLVPHFSVFHSV 333
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
I+G C VGKV+EA ++ +L G PH ++W ++ +C E+
Sbjct: 334 IRGCCTVGKVEEAAQIMSRMLDLGVVPHVESWSSVIRCVCKDED 377
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT--- 152
+++ +LI R+ + ++ + L+S H V+P TY +I +S ++T
Sbjct: 153 ASHNLLIDAAARSGHVAVSLSLFHRLRSLH--VSPDADTY--RILTQSLCRKAQVRTAAT 208
Query: 153 -FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ML P +L L + LR A+ L GV P+ YN ++
Sbjct: 209 LLDEMLHRGIPADPLAYTTVLNALC-RKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGM 267
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G A + M + G P+ +Y ++ GLC ++A L DM+ KG VP
Sbjct: 268 CREGRPLDACKVVVDMMDNGCTPNAVTYGTVVNGLCVSGLYDKAEAYLVDMVGKGLVPHF 327
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+ +++ C K+ EA +++ RM G P + +++V+ C++ I+A
Sbjct: 328 SVFHSVIRGCCTVGKVEEAAQIMSRMLDLGVVPHVESWSSVIRCVCKDEDCIEA 381
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PN +Y ++ C +G A M +G++P + +++G C +V A
Sbjct: 287 GCTPNAVTYGTVVNGLCVSGLYDKAEAYLVDMVGKGLVPHFSVFHSVIRGCCTVGKVEEA 346
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
++ ML+ G VP S+++++ +C+ + EA L + +G N
Sbjct: 347 AQIMSRMLDLGVVPHVESWSSVIRCVCKDEDCIEAELLQIVGRQRGSN 394
>gi|242045394|ref|XP_002460568.1| hypothetical protein SORBIDRAFT_02g030880 [Sorghum bicolor]
gi|241923945|gb|EER97089.1| hypothetical protein SORBIDRAFT_02g030880 [Sorghum bicolor]
Length = 389
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 163/224 (72%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
S+N+++ A +G ++++ +LF+++ V PD ++YRIL Q LCRK+QV A LL++M
Sbjct: 154 SHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAATLLDEM 213
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G D L+YTT+LN+LCRKK+LREAY+LLC M+ +G +PDIVHYNTV++G CREGR
Sbjct: 214 LHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRP 273
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+DACKV+ DM +GC PN V+Y T+V GLC G++D A+ Y+ M+ KG PHFSV H++
Sbjct: 274 LDACKVVGDMMESGCTPNAVTYATVVNGLCVSGLYDKAETYLVDMVGKGLVPHFSVFHSV 333
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
IKG C VGKV+EA ++ +L G PH ++W ++ +C E+
Sbjct: 334 IKGCCTVGKVEEAAQIMSWMLDLGVVPHVESWSSVIRCVCKDED 377
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 9/234 (3%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT--- 152
+++ +LI R+ + ++ + L+S H V+P TY +I +S ++T
Sbjct: 153 ASHNLLIDAAARSGHVAVSLSLFHRLRSLH--VSPDADTY--RILTQSLCRKAQVRTAAT 208
Query: 153 -FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ML P +L L + LR A+ L GV P+ YN ++
Sbjct: 209 LLDEMLHRGIPADPLAYTTVLNAL-CRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGM 267
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G A + M E G P+ +Y ++ GLC ++A L DM+ KG VP
Sbjct: 268 CREGRPLDACKVVGDMMESGCTPNAVTYATVVNGLCVSGLYDKAETYLVDMVGKGLVPHF 327
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+ +++ C K+ EA +++ M G P + +++V+ C++ I+A
Sbjct: 328 SVFHSVIKGCCTVGKVEEAAQIMSWMLDLGVVPHVESWSSVIRCVCKDEDCIEA 381
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
S+ L+++ R + + L R++ +PD Y + CR+ + A +L++M
Sbjct: 154 SHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAATLLDEM 213
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G + ++Y T++ LC + A + + LM +G SP + +I G C G+
Sbjct: 214 LHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRP 273
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+AC V+ +++++G P+ T+ +V +C +K L ++V
Sbjct: 274 LDACKVVGDMMESGCTPNAVTYATVVNGLCVSGLYDKAETYLVDMV 319
>gi|357154394|ref|XP_003576768.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Brachypodium distachyon]
Length = 402
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 162/223 (72%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
S+N+++ A +G ++++ +LF+++ V PD ++YR+L Q LCR+ QV+ A LL++M
Sbjct: 154 SHNLLIEAAARSGHLAVSLSLFHRLRSLHVSPDADTYRVLTQSLCRRGQVHTATTLLDEM 213
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G D L+YTT+LN+LCRKK+LREAY+LLC M+ +G +PDIVHYNTV++G CREGR
Sbjct: 214 LHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRP 273
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+DACKV+ DM +GC+PN+ +Y +V GLC G+FD A+ Y++ M+ +G PHFSV H++
Sbjct: 274 LDACKVVGDMKDSGCIPNVATYAAVVNGLCISGLFDKAEAYLEDMVGQGIIPHFSVFHSV 333
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
IKG C VGK +EA ++ +L G PH +TW +V +C E
Sbjct: 334 IKGCCTVGKAEEAARMMNRMLDLGIPPHAETWSSVVSSVCNDE 376
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 5/231 (2%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+++ +LI R+ + ++ + L+S H V+P TY L + A
Sbjct: 153 ASHNLLIEAAARSGHLAVSLSLFHRLRSLH--VSPDADTYRVLTQSLCRRGQVHTATTLL 210
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML P +L L + LR A+ L GV P+ YN ++ C
Sbjct: 211 DEMLHRGIPADPLAYTTVLNAL-CRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCR 269
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G A + M + G +P+V +Y ++ GLC ++A LEDM+ +G +P
Sbjct: 270 EGRPLDACKVVGDMKDSGCIPNVATYAAVVNGLCISGLFDKAEAYLEDMVGQGIIPHFSV 329
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+ +++ C K EA +++ RM G P +++VV C + I+
Sbjct: 330 FHSVIKGCCTVGKAEEAARMMNRMLDLGIPPHAETWSSVVSSVCNDEAYIE 380
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 201/363 (55%), Gaps = 5/363 (1%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDD 116
IGS +V +LI ++ D A IFD A+ + FRHS+ T+ ++I +L A +F L ++
Sbjct: 13 IGSA-QVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEE 71
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L +K E +T +F + + Y + P A++ FR M E+ C+P K + +LV
Sbjct: 72 LLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILV 131
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPD 235
N L+ A ++ + G+ P+ S N++++A C N G + A +F +M RG PD
Sbjct: 132 G-ENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPD 190
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y L+ GLCR ++ A +L ++M K P ++YT+L++ LC+ K L A +LL
Sbjct: 191 SYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLE 250
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KG P++ Y++++ G C+ G + A ++L+ M S LPN+++Y TLV GLC +G
Sbjct: 251 EMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEG 310
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + + M +G P + +I GFC++ K EA L+E++ G +P+ TW
Sbjct: 311 KLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWS 370
Query: 416 MIV 418
+ V
Sbjct: 371 LHV 373
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 44/268 (16%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY LI A + F+ M C P ++ L ++ L A
Sbjct: 189 PDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKD-LDSAIR 247
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ PN +Y+ +M C +G S A L + M R +P++ +Y L+ GLC
Sbjct: 248 LLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLC 307
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ AV++L+ M +G PD Y +++ C K EA L M + G +P+ +
Sbjct: 308 KEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRL 367
Query: 308 HY-------NTVVLGFCRE---------------GRAIDA-------------------C 326
+ N VV G C E G +IDA
Sbjct: 368 TWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAA 427
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
++++M +GC+P+ V++ +V D+
Sbjct: 428 HLVDEMVLDGCIPDEVTWNAVVCAFWDR 455
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 21/233 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L ++K +L + S+ + P++FTY L+ + +S RAL+
Sbjct: 228 TYTSLIHGLCQSKDLDSAIRLLEEMASK--GIKPNVFTYSSLMDGHCKSGCSSRALELLD 285
Query: 155 SMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
M+ + LP N I + H L+ A ++ G+ P+ Y ++
Sbjct: 286 MMVSR--RHLP---NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISG 340
Query: 211 FCFNGDISIAYTLFNKMFERGVMPD-------VESYRILMQGLCRKSQVNRAVDLLEDML 263
FC A ++M G+ P+ V + I++QGLC + NRA L M
Sbjct: 341 FCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMR 399
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+G D ++ +L+N C K L +A L+ M + GC PD V +N VV F
Sbjct: 400 TRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAF 452
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
GF +++ +++ L R A +LLCRMK + CN + ++ + R + +DA
Sbjct: 45 GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104
Query: 326 CKVLEDMPSNGCLPNLVSYRT-----------------------------------LVGG 350
+V M C P+ SY T L+
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164
Query: 351 LC-DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC + G D A + + M ++G P LI G C +GK+ EA + +E+ +P
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSP 224
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C ++++ +L E+ IK
Sbjct: 225 TVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIK 258
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 196 GVLPN-------TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G+ PN + +NI+++ C + A+ L+ M RG+ D +++ L+ C
Sbjct: 361 GISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCN 419
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
K +++A L+++M+ G +PD +++ ++ + ++K+RE+ +L+
Sbjct: 420 KGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELV 465
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 195/357 (54%), Gaps = 4/357 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+P +V KL+ ++ D + +FD A+ + + H S++ ++L+L A F +D++
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ +K E+ V+ + + + Y + P +L+ F M +F+C P K +L +LV
Sbjct: 75 VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV-E 133
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPDVE 237
N L AF +K+ + G+ P S N++++A C N G + +F +M +RG PD
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLCR +++ A L +M+ K P ++YT+L+N LC K + EA + L M
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K KG P++ Y++++ G C++GR++ A ++ E M + GC PN+V+Y TL+ GLC +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A + + M +G P + +I GFC + K EA L+E++ G P+ TW
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 1/216 (0%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F+KM + P ++Y ++ L ++Q+N A ++M G P S L+ +LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 283 RKKKLREA-YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
R +A K+ M +GC+PD Y T++ G CR GR +A K+ +M C P +
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y +L+ GLC D A +Y++ M SKG P+ +L+ G C G+ +A + E
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G P+ T+ ++ +C +++++ E+L+ +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY LI D A K F M+E +C P ++ L +N + A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMR 248
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G+ PN +Y+ +M C +G A LF M RG P++ +Y L+ GLC
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ AV+LL+ M +G PD Y +++ C K REA L M + G P+ +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ + +V GLC Y+ M
Sbjct: 369 TWNI----------------------------HVKTSNEVVRGLCANYPSRAFTLYLS-M 399
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S+G S +L+K C G+ +A +++E++ G P + TW +++
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNI-------MMRAFCFNGDISIAYTLFNKMFERGVMP 234
R A + G+ PN ++NI ++R C N S A+TL+ M RG+
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISV 406
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+VE+ L++ LC+K + +AV L+++++ G +P ++ L+ K + EA L
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
Query: 295 CR 296
R
Sbjct: 467 LR 468
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 194/361 (53%), Gaps = 4/361 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+P VQ+LI ++ D A IFD A+ + F+H +T+ ++I KL A F L + +L
Sbjct: 43 TPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETLL 102
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K E VT + + + Y + P +++ F M +F+CKP K +L +LV
Sbjct: 103 DRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILV-E 161
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPDVE 237
N L+ AF ++ K G+ P S N++++AFC N G + A LF M G PD
Sbjct: 162 ENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSY 221
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLCR + A +LL++M KG P ++YT++++ LC+ + EA +LL M
Sbjct: 222 TYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDM 281
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K K P++ Y++++ GFC+ G + A +LE M PN++SY TL+ GLC++G
Sbjct: 282 KDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKI 341
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A + M +GF P + ++ C+V + EA L+E++ G P+ TW +
Sbjct: 342 NEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLH 401
Query: 418 V 418
V
Sbjct: 402 V 402
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F+KM + P +SY ++ L ++Q+ A DM G P S L+ + C
Sbjct: 136 VFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFC 195
Query: 283 RKK-KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
+ + +A L M GC PD Y T++ G CR ++A ++L++M + GC P++
Sbjct: 196 KNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSV 255
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y +++ GLC D A + ++ M K P+ +L+ GFC G A +LE
Sbjct: 256 VTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILEL 315
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+++ P+ ++ ++ +C ++ + E+ + +
Sbjct: 316 MIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRM 351
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 123/319 (38%), Gaps = 77/319 (24%)
Query: 127 PVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR------ 179
P T + LIK + + S D+A+ FR+M C+P ++ L R
Sbjct: 181 PPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAK 240
Query: 180 ----------------------------NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
N + A L + + PN +Y+ +M F
Sbjct: 241 ELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGF 300
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G S A + M ++ + P++ SY L+ GLC + ++N A+++ + M +GF PD
Sbjct: 301 CKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD-------------IVH---------- 308
Y ++N LC + +EA L M + G P+ ++H
Sbjct: 361 GLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNR 420
Query: 309 -------------------YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
+N+++ FC + ++L++M NGC+P + T+V
Sbjct: 421 AFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVN 480
Query: 350 GLCDQGMFDVAKKYMQLMI 368
CD+ A K +QL +
Sbjct: 481 CFCDERKACDAMKLLQLQL 499
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 213/410 (51%), Gaps = 18/410 (4%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+P +V++L+ ++ D AK IFD AS + FRH ++T+ ++I KL A F +++L
Sbjct: 14 TPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEML 73
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K E +T +F + + Y ++P A++ F M +F CKP K + +LV
Sbjct: 74 NRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILV-E 132
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPDVE 237
N L+ A +K + GV + S N++++A C N G I A+ +F +M +RG PD
Sbjct: 133 ENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSY 192
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLC+ + A +L ++M KG P ++Y+ L++ LC+ + EA L +M
Sbjct: 193 TYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKM 252
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K K P++ Y++++ G C+ G +++A ++LE M PN+V+Y TL+ GLC +G
Sbjct: 253 KKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKL 312
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-- 415
A + + M +G P + +I GFCN+ K EA L+E++ +P+ TW
Sbjct: 313 AEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLH 372
Query: 416 -----MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLI 460
M+V +C LN ++ I TR + G D L+
Sbjct: 373 VKLNNMVVQGLCTNGN-------LNRSFQLYIGMRTRGISIDAGTFDSLV 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K + + P++FTY L+ ++ A++ M+ KP + ++ L
Sbjct: 251 KMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKE- 309
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A + G+ P+ Y ++ FC A T ++M + P+ ++
Sbjct: 310 GKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTW 369
Query: 240 -------RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
+++QGLC +NR+ L M +G D ++ +L+ C+K L +A +
Sbjct: 370 SLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAAR 429
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGF 316
+ M + GC PD ++ VV GF
Sbjct: 430 IFDEMVLDGCVPDHGIWSAVVGGF 453
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ ++ H P + T + + E L + A++T M KP +I+
Sbjct: 286 MMVRKRHKPNMVTYSTLINGLCKEGKLAE-AVETLDRMKLQGLKPDAGLYGKIINGFCNI 344
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSY-------NIMMRAFCFNGDISIAYTLFNKMFERG 231
R + A L + + PN ++ N++++ C NG+++ ++ L+ M RG
Sbjct: 345 RKFQEAATYLDEMVLGQ-ISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRG 403
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ D ++ L++ C+K +++A + ++M+ G VPD ++ ++ ++K+REA+
Sbjct: 404 ISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAF 463
Query: 292 K 292
+
Sbjct: 464 E 464
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 194/357 (54%), Gaps = 4/357 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+P +V KL+ ++ D + +FD A+ + + H S++ ++ +L A F +DI+
Sbjct: 15 TPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIV 74
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K E+ V+ + + + Y + P +L+ F M +F+C P K +L +LV
Sbjct: 75 ARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV-E 133
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPDVE 237
N L AF +K+ + G+ P S N++++A C N G + +F++M +RG PD
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSY 193
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLCR +++ A L +M+ K P ++YT+L+N LC K + EA + + M
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEM 253
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K KG P++ Y++++ G C++GR++ A ++ E M + GC PN+V+Y TL+ GLC +
Sbjct: 254 KGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A + + M +G P + +I GFC V K EA L+E++ G P+ TW
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTW 370
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F+KM + P ++Y ++ L ++Q+N A ++M G P S L+ +LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 283 RKKKLREA-YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
R +A K+ M +GC+PD Y T++ G CR GR +A K+ +M C P +
Sbjct: 168 RNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y +L+ GLC D A +Y++ M KG P+ +L+ G C G+ +A + E
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G P+ T+ ++ +C +++++ E+L+ +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 32/291 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY LI D A K F M+E +C P ++ L +N + A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMR 248
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G+ PN +Y+ +M C +G A LF M RG P++ +Y L+ GLC
Sbjct: 249 YVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ AV+LL+ M +G PD Y +++ C K REA L M + G P+ +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRL 368
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ + +V GLC Y+ M
Sbjct: 369 TWNI----------------------------HVKTSNEVVRGLCTNYPSRAFTLYLS-M 399
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S+G S +L+K C G+ +A +++E++ G P++ TW +++
Sbjct: 400 RSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNI-------MMRAFCFNGDISIAYTLFNKMFERGVMP 234
R A + G+ PN ++NI ++R C N S A+TL+ M RG+
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYP-SRAFTLYLSMRSRGISV 406
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+VE+ L++ LC+K + +AV L+++++ G +P+ ++ L+ + EA L
Sbjct: 407 EVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEASDSL 466
Query: 295 CR 296
R
Sbjct: 467 LR 468
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 199/363 (54%), Gaps = 5/363 (1%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDD 116
IGS +V +LI ++ D A IFD A+ + FRHS+ T+ ++I +L A +F L ++
Sbjct: 13 IGSA-QVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEE 71
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L +K E +T +F + + Y + P A++ FR M E+ C+P K + +LV
Sbjct: 72 LLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILV 131
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPD 235
N L+ A ++ + G+ P+ S N++++A C N G + A +F +M RG P
Sbjct: 132 G-ENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPH 190
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y L+ GLCR ++ A +L ++M K P ++Y +L++ LC+ K L A +LL
Sbjct: 191 SYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLE 250
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KG P++ Y++++ G C+ G + A ++L+ M S LPN+++Y TLV GLC +G
Sbjct: 251 EMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEG 310
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + + M +G P + +I GFC++ K EA L+E++ G +P+ TW
Sbjct: 311 KLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWS 370
Query: 416 MIV 418
+ V
Sbjct: 371 LHV 373
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 44/268 (16%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY I L A + F+ M C P ++ L ++ L A
Sbjct: 189 PHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKD-LDSAIR 247
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ PN +Y+ +M C +G S A L + M R +P++ +Y L+ GLC
Sbjct: 248 LLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLC 307
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ AV++L+ M +G PD Y +++ C K EA L M + G +P+ +
Sbjct: 308 KEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRL 367
Query: 308 HY-------NTVVLGFCRE---------------GRAIDA-------------------C 326
+ N VV G C E G +IDA
Sbjct: 368 TWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAA 427
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
++++M +GC+P+ ++ +V D+
Sbjct: 428 HLVDEMVLDGCIPDEXTWNAVVCAFWDR 455
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 21/233 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L ++K +L + S+ + P++FTY L+ + +S RAL+
Sbjct: 228 TYXSLIHGLCQSKDLDSAIRLLEEMASK--GIKPNVFTYSSLMDGHCKSGCSSRALELLD 285
Query: 155 SMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
M+ + LP N I + H L+ A ++ G+ P+ Y ++
Sbjct: 286 MMVSR--RHLP---NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISG 340
Query: 211 FCFNGDISIAYTLFNKMFERGVMPD-------VESYRILMQGLCRKSQVNRAVDLLEDML 263
FC A ++M G+ P+ V + I++QGLC + NRA L M
Sbjct: 341 FCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMR 399
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+G D ++ +L+N C K L +A L+ M + GC PD +N VV F
Sbjct: 400 TRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAF 452
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 36/214 (16%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
GF +++ +++ L R A +LLCRMK + CN + ++ + R + +DA
Sbjct: 45 GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104
Query: 326 CKVLEDMPSNGCLPNLVSYRT-----------------------------------LVGG 350
+V M C P+ SY T L+
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164
Query: 351 LC-DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC + G D A + + M ++G PH LI G C +GK+ EA + +E+ +P
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSP 224
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C ++++ +L E+ IK
Sbjct: 225 TVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIK 258
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 196 GVLPN-------TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G+ PN + +NI+++ C + A+ L+ M RG+ D +++ L+ C
Sbjct: 361 GISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCN 419
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
K +++A L+++M+ G +PD ++ ++ + ++K+RE+ +L+
Sbjct: 420 KGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELV 465
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 223/459 (48%), Gaps = 77/459 (16%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN-FRHSNSTYLILILKLGRAKYFS 112
N PI SP R+ L+ Q+DP LA ++F + P FR+++ +Y ++I KLGR++ F
Sbjct: 2 NPPKPI-SPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFH 60
Query: 113 LIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
++ IL L+ E + +F +I Y + LPDRA++TF S+ EF C+ K LN +
Sbjct: 61 EMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSL 120
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L L+ + + + FD S P+ +YN+++ A C +G + A+ +F++M +
Sbjct: 121 LNALLKCKEFEK--FDGILSGIDKFATPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKH 178
Query: 232 VMPDV-----------------ESYRI-------------------LMQGLCRKSQVNRA 255
V P+V E++R+ LM+GLCR ++++ A
Sbjct: 179 VCPNVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLA 238
Query: 256 VDL-----------------------------------LEDMLNKGFVPDTLSYTTLLNS 280
+L LE+M G PDT++Y +++
Sbjct: 239 FELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISG 298
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C +K AY +L M KGC PD++ YN ++ G C+EG+ +A + EDMP GC P+
Sbjct: 299 FCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPD 358
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ SYR L GLC+ F+ A + M+ KG++P + ++ C G ++ C VL
Sbjct: 359 VGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLN 418
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
L+K G D W + V ++C E++ E+++ +K
Sbjct: 419 SLVK-GNVIDGDAWSLAVSKVCKKEKLSNGSELVDIFLK 456
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++K PD +Y L+N+ C L +A+ + M K P++V + T++ G C + R
Sbjct: 140 IDKFATPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRL 199
Query: 323 IDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ EDM PN Y +L+ GLC +A + + M++ +
Sbjct: 200 DEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYST 259
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI VG+ DE VLEE+ + G P T+ ++ C ++ E VL E+V
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKG 319
Query: 442 IKGDT 446
K D
Sbjct: 320 CKPDV 324
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 206/417 (49%), Gaps = 46/417 (11%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
LI ++DP A EIF+ + Q F H+N+TY ++ KL ++K F ID +L + E
Sbjct: 136 LIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCK 195
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLV---------- 176
+F L+K +++ +L +R ++ F ++ KP K ++ L LLV
Sbjct: 196 FHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSITAK 255
Query: 177 ----------------THRNY------------------LRPAFDLFKS-AHKHGVLPNT 201
+H +Y L+ A +LF+ K +LP+
Sbjct: 256 NGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDA 315
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+YN ++ FC + A + M + G P+V +Y LM G C++ ++ A ++ ++
Sbjct: 316 LTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 375
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + G PDT+ YTTL+N CR ++ EA +LL M C D V +N ++ G CREGR
Sbjct: 376 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGR 435
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A +LE +P G N SYR ++ LC +G A + + LM+ +G PHF+ S+
Sbjct: 436 FEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNE 495
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+ C GKV +A L LL+ G P ++W ++V IC ++ E+L+++V
Sbjct: 496 LLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 552
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+++ Y+T++ G C GR +A ++ E+M S + LP+ ++Y L+ G C D A K
Sbjct: 277 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALK 336
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+ M G +P+ AL+ GFC G+++EA V +E+ G P + ++ C
Sbjct: 337 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 396
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ E+L ++ + + + DT +G
Sbjct: 397 RAGRVDEAMELLKDMXENKCRADTVTFNVILG 428
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 234/485 (48%), Gaps = 82/485 (16%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGS---PCRVQKLIASQSDPLLAKE 80
PKT ++ +S+S+ SP++P + +++ P P R+ +I Q + LA +
Sbjct: 22 PKTTAVALLHSNSTG-SPNNP-LPESYTVTPPIKPWPQRLYPKRLVSMITRQQNLDLALQ 79
Query: 81 IFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
IF+YA + QPNF H+ TY +I KL RA+ F ++ +L L ++F +I+
Sbjct: 80 IFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRN 139
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH-KHGVL 198
Y + PD AL+TF + +FN + + LN +L V ++ Y +FK+ K+GVL
Sbjct: 140 YGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRY-DLVHAMFKNCRSKYGVL 198
Query: 199 PNTKSYNIMMRAFCFNGDIS------------------IAYT-----------------L 223
PN + NI+++A C D+ + YT +
Sbjct: 199 PNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKV 258
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F ++F+RG +PD +Y ILM G C + ++ A+ L++DM G P+ ++Y ++ + C+
Sbjct: 259 FGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCK 318
Query: 284 KKKLREAYKLL-------------------------------C----RMKVKGCNPDIVH 308
+KK EA LL C RM K C PD
Sbjct: 319 EKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAI 378
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
+T++ C+EG+ +A K+ + G +P+L++Y TL+ G+C++G A K M+
Sbjct: 379 MSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMM 437
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
KG+ P+ + LIKGF +G E +LEE+L P++ T+ +++ ++C +M
Sbjct: 438 EKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELC---KMG 494
Query: 429 KLGEV 433
GEV
Sbjct: 495 MEGEV 499
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 155/361 (42%), Gaps = 39/361 (10%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT--YLIKIYAESNLPD 147
N + S + L+ + K + L+ + +S+ Y V P++FT LIK + N +
Sbjct: 160 NVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSK-YGVLPNVFTCNILIKALCKKNDVE 218
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+K M P IL + R + A +F G LP+ +Y I+
Sbjct: 219 SAVKVLDEMPAMGMIPNVVTYTTILGGY-SSRGDMVNANKVFGELFDRGWLPDATTYTIL 277
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
M +C G ++ A L + M E GV P+ +Y ++++ C++ + A +LL+DML + +
Sbjct: 278 MNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQY 337
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD------IVH------------- 308
VP + +++ LC K+ EA +L RM K C PD ++H
Sbjct: 338 VPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARK 397
Query: 309 ---------------YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
YNT++ G C +G +A K+ +DM G PN +Y L+ G
Sbjct: 398 LFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSK 457
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G + ++ M+ P+ S LI+ C +G E V+ + +G D+
Sbjct: 458 IGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASG-GVDSDS 516
Query: 414 W 414
W
Sbjct: 517 W 517
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 5/274 (1%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+ +T L+ Y E A+K M E +P ++E + A +L
Sbjct: 272 TTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKK-AGEARNLLD 330
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ +P++ ++ C G I A L+ +M ++ MPD L+ LC++
Sbjct: 331 DMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEG 390
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+V A L + +G +P L+Y TL+ +C K +L EA KL M KG P+ YN
Sbjct: 391 KVWEARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYN 449
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ GF + G A + ++LE+M N C+PN +Y L+ LC GM K + + ++
Sbjct: 450 MLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMAS 509
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
G S L K VG +D L+ K
Sbjct: 510 GGVDSDSWDLFLNKA---VGNLDRGSKALDSFFK 540
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 30/346 (8%)
Query: 124 EHYPVTPSLFTYLIKIYA---------ESNLPDRALKTFRSMLEFNCKPLPK------QL 168
E Y VTP + + ++Y + NL D AL+ F E+ K P
Sbjct: 44 ESYTVTPPIKPWPQRLYPKRLVSMITRQQNL-DLALQIF----EYAGKYQPNFSHNYDTY 98
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
+ I+ L R + P L HK + + ++R + G A F ++
Sbjct: 99 DSIIHKLSRARVF-GPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQ 157
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-----GFVPDTLSYTTLLNSLCR 283
+ V V S L+ + N+ DL+ M G +P+ + L+ +LC+
Sbjct: 158 DFNVQRSVRSLNTLLNAFVQ----NKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCK 213
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
K + A K+L M G P++V Y T++ G+ G ++A KV ++ G LP+ +
Sbjct: 214 KNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATT 273
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ G C+QG A K M M G P+ +++ +C K EA +L+++L
Sbjct: 274 YTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDML 333
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
+ P ++ +C ++E+ E+ ++K D I+
Sbjct: 334 ERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIM 379
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 215/447 (48%), Gaps = 47/447 (10%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLI------ASQSDPLLAKEIFDYAS 86
Y S Q P ++ ++ S + P S R++K I S DP A +F+
Sbjct: 57 YKPSQQYHTFRP--RRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLFN-QY 113
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+Q F+H +Y L+ KL R++ F ++ +L L++ + +LF LI+ Y +S +P
Sbjct: 114 QQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMP 173
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++A++ F+ M FNC N +L +LV + +L A +F + K G N+ S+NI
Sbjct: 174 EKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFL-DAIGIFDRSTKMGFRRNSISFNI 232
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+++ + G+ A+ +F +M ++ V P V ++ L+ LC K ++ A+ LLEDM+ K
Sbjct: 233 IIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKR 292
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC------------------------ 302
P+ ++Y L+ LC K +EA K++ M +GC
Sbjct: 293 HRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSK 352
Query: 303 -----------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
PD+V YN ++ C+EGRA++A KVL +M GC PN +YR +V G
Sbjct: 353 TLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGF 412
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C F+ K + M+ G P L+ G GK+D AC VLEE+ K H
Sbjct: 413 CQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHL 472
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ W +V C G+ G ++ E+V
Sbjct: 473 EAWEALVKDACPGD--RGAGGLVRELV 497
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 193/368 (52%), Gaps = 11/368 (2%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
V++LI ++ D +FD A+ + FRH ++T+ +I +L F + +L +K
Sbjct: 18 VEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMK 77
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
E VT +F + + Y + P A++ F M +F KP K + ++LV N++
Sbjct: 78 QEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILV-EENHV 136
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRI 241
+ A +K + G+ P S NI+++A C N + + A+ LF +M RG PD +Y
Sbjct: 137 KRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGT 196
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++++A +LL++M KG P +SYT+L++ LC+ L EA +LL M + G
Sbjct: 197 LINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIING 256
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++ Y++++ G C+ G + A ++LE M LPN+V+Y TL+ GLC +G A
Sbjct: 257 IEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAV 316
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV------ 415
+ + M +G P + +I G C EA ++E+ G +P+ +W
Sbjct: 317 EILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMH 376
Query: 416 -MIVPQIC 422
M+V +C
Sbjct: 377 NMVVQGLC 384
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 10/315 (3%)
Query: 128 VTPSLFTYLIKIYAESN----LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+T SL LIK + N + D A + + + + ++R++ + N R
Sbjct: 13 ITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSV-----NQFR 67
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PA + + + + + R + A +F+KM + V P +SY +
Sbjct: 68 PAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVF 127
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE-AYKLLCRMKVKGC 302
L ++ V RA+ ++M KG P +S L+ +LC+ ++ E A++L M +GC
Sbjct: 128 DILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGC 187
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD Y T++ G C+ G+ A ++L++M G P++VSY +L+ GLC D A +
Sbjct: 188 QPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIE 247
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ MI G P+ +L+ G C G +A +LE +++ P+ T+ ++ +C
Sbjct: 248 LLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLC 307
Query: 423 AGEEMEKLGEVLNEI 437
+ + E+L+ +
Sbjct: 308 KEGKHREAVEILDRM 322
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 12/267 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L + S ++L + E ++PS+ +Y LI +SN D A++
Sbjct: 193 TYGTLINGLCKLGKISQAKELLDEM--EEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLE 250
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ +P + +++ L + A +L + + +LPN +Y+ ++ C
Sbjct: 251 EMIINGIEPNVFTYSSLMDGLCKS-GHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKE 309
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G A + ++M +G+ PD Y ++ GLC A + +++M G P+ S+
Sbjct: 310 GKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASW 369
Query: 275 T-------TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
T ++ LC A++L M+ +G + +I ++ +V FC+ G A +
Sbjct: 370 TFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAAR 429
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+LE+M +GC+P+ + L+ GL D+
Sbjct: 430 ILEEMILDGCIPDEGMWNVLMCGLWDR 456
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A++ M KP RI+ L NY + A +
Sbjct: 294 PNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNY-QEAAN 352
Query: 188 LFKSAHKHGVLPNTKSY-------NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
G+ PN S+ N++++ C N D + A+ L+ M RG+ ++ ++
Sbjct: 353 FIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFD 412
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
L++ C++ +N+A +LE+M+ G +PD + L+ L +KK+RE +LL
Sbjct: 413 CLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
P+RA TF K N +++ L + + R AF L+ S G+ +++
Sbjct: 364 PNRASWTFHV----------KMHNMVVQGLCNNVDPTR-AFQLYLSMRTRGISVEIGTFD 412
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ FC GD++ A + +M G +PD + +LM GL + +V +LL L +
Sbjct: 413 CLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQ 472
Query: 266 GFV 268
FV
Sbjct: 473 KFV 475
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 200/404 (49%), Gaps = 40/404 (9%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
DP A +F+ + F+H +Y LI KL R++ F ++ IL L++ + +LF
Sbjct: 61 DPCEALALFE-NYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLF 119
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
LI+ Y +++L ++ ++ F M FNC + N +L LV + + A ++F+ A+
Sbjct: 120 VALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSK-ASEIFQQAY 178
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G PN+ SYNIM++ + G A LF++M E+GV P V +Y + LCRK +++
Sbjct: 179 EMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMD 238
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC----------- 302
A+ L ++M KG P+ ++Y L+ C K +EA KL+ M+ GC
Sbjct: 239 TALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLM 298
Query: 303 ------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
PD+V YN +V C+EG+ DA KVL M GC
Sbjct: 299 THLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCD 358
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE-ACG 397
PN +YR ++ G C+ G FD A K + M+ G PH +L+ G D+ C
Sbjct: 359 PNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCF 418
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
VLEE+ K +TW +++ +C G+ +E +G LN+ + +
Sbjct: 419 VLEEMEKRQLRFDAETWRILIMDVC-GQHVE-IGSHLNDFISLH 460
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 209/434 (48%), Gaps = 45/434 (10%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLI------ASQSDPLLAKEIFDYAS 86
Y S Q P ++ ++ S + P S R++K I S DP A +F+
Sbjct: 419 YKPSQQYHTFRP--RRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLFN-QY 475
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+Q F+H +Y L+ KL R++ F ++ +L L++ + +LF LI+ Y +S +P
Sbjct: 476 QQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMP 535
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++A++ F+ M FNC N +L +LV + +L A +F + K G N+ S+NI
Sbjct: 536 EKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFL-DAIGIFDRSTKMGFRRNSISFNI 594
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+++ + G+ A+ +F +M ++ V P V ++ L+ LC K ++ A+ LLEDM+ K
Sbjct: 595 IIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKR 654
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC------------------------ 302
P+ ++Y L+ LC K +EA K++ M +GC
Sbjct: 655 HRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSK 714
Query: 303 -----------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
PD+V YN ++ C+EGRA++A KVL +M GC PN +YR +V G
Sbjct: 715 TLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGF 774
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C F+ K + M+ G P L+ G GK+D AC VLEE+ K H
Sbjct: 775 CQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHL 834
Query: 412 DTWVMIVPQICAGE 425
+ W +V C G+
Sbjct: 835 EAWEALVKDACPGD 848
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 206/412 (50%), Gaps = 41/412 (9%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN-FRHSNSTYLILILKLGRAKYFS 112
N PI SP R+ L+ Q+ P LA ++F + P FR+++ +Y ++I KLGR++ F
Sbjct: 2 NPPKPI-SPFRLSSLLRLQNGPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFH 60
Query: 113 LIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
++ IL L+ E + +F +I Y + LPDRA++TF S+ EF C+ K LN +
Sbjct: 61 EMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSL 120
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L L+ + + + FD S PN +YNI++ A C +G + A+ +F++M +
Sbjct: 121 LNALLNCKEFEK--FDGILSGIDKFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKH 178
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREA 290
V P+V ++ L+ GLCR S+++ A L EDM+ V P+ Y +L+ LCR +L A
Sbjct: 179 VCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLA 238
Query: 291 YKL-----------------------------------LCRMKVKGCNPDIVHYNTVVLG 315
++L L M+ GC PD V YN ++ G
Sbjct: 239 FELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISG 298
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC E A VLE+M GC P+++SY ++ GLC +G + A + M +G +P
Sbjct: 299 FCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPD 358
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
L G C + +EA +L+E++ G AP + V +C+G E+
Sbjct: 359 VGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSGREL 410
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++K P+ +Y L+N+ C +L +A+ + M K P++V + T++ G CR+ R
Sbjct: 140 IDKFATPNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRL 199
Query: 323 IDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ EDM PN Y +L+ GLC +A + + M++ +
Sbjct: 200 DEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYST 259
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI VG+ DE VLEE+ + G P T+ ++ C ++ E VL E+V
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKG 319
Query: 442 IKGDT 446
K D
Sbjct: 320 CKPDV 324
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 200/403 (49%), Gaps = 40/403 (9%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
DP A +F+ + F+H +Y LI KL R++ F ++ IL L++ + +LF
Sbjct: 61 DPCEALALFE-NYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLF 119
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
LI+ Y +++L ++ ++ F M FNC + N +L LV + + A ++F+ A+
Sbjct: 120 VALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSK-ASEIFQQAY 178
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ PN+ SYNIM++ + G A LF++M E+GV P V +Y + LCRK +++
Sbjct: 179 EMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMD 238
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC----------- 302
A+ L ++M KG P+ ++Y L+ C K +EA KL+ M+ GC
Sbjct: 239 TALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLM 298
Query: 303 ------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
PD+V YN +V C+EG+ DA KVL M GC
Sbjct: 299 THLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCD 358
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE-ACG 397
PN +YR ++ G C+ G FD A K + M+ G PH +L+ G D+ C
Sbjct: 359 PNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCF 418
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
VLEE+ K +TW +++ +C G+ +E +G LN+++ +
Sbjct: 419 VLEEMEKRQLRFDAETWRILIMDVC-GQHVE-IGSHLNDLISL 459
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 41/390 (10%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+ + DP A +F + ++ FRH +Y L+ KL R++ F ++ IL +K
Sbjct: 49 VKTVEDPEEALSLF-HRYKEQGFRHYYPSYAALLYKLARSRMFDAVETILAHMKDTEMQC 107
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
S+F L + Y P++A++ F M +FNC + N +L +L+ + + A D+
Sbjct: 108 RESVFIALFQHYG----PEKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRF-DEANDI 162
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F +++ G PNT ++NIM++ G+ A +F++M ++ V P V +Y L+ LCR
Sbjct: 163 FGKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCR 222
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC------ 302
K +++A+ LLEDM KG + ++Y L+ LC +K EA KL+ M +GC
Sbjct: 223 KGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVN 282
Query: 303 -----------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
PD+V YN ++ C+EG+A++A KVL +M
Sbjct: 283 FGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQ 342
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC+PN +YR +V GLC G F+VA + M++ P + ++ G G +D
Sbjct: 343 IGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNID 402
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+C VLEE+ K ++W I+ C+
Sbjct: 403 GSCFVLEEMEKRKLEFDLESWETIIKSACS 432
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 14/283 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILIL-KLGRAKY---FSLIDDILITLKSEHYPVTPSLF 133
A +IF S + FR + T+ I++ +L + ++ + D++L V PS+
Sbjct: 159 ANDIFG-KSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEML------QKRVQPSVV 211
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY LI D+A+ M + ++E L + +F
Sbjct: 212 TYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDM 271
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A++ G ++ ++M G + A +L ++M +R + PDV +Y IL+ LC++ +
Sbjct: 272 AYR-GCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGK 330
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A +L +M G VP+ +Y +++ LC+ A +L M P +N
Sbjct: 331 AMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNC 390
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+V+G + G +C VLE+M +L S+ T++ C +
Sbjct: 391 MVVGLLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKSACSE 433
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 18/268 (6%)
Query: 55 SKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
+K G C V D +L K + QP+ NS L K K +L+
Sbjct: 187 AKGEWGKACEV-------FDEMLQKRV------QPSVVTYNSLIGFLCRKGDLDKAMALL 233
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+D+ K +H + L++ + A K M CK P ++
Sbjct: 234 EDM--GQKGKH--ANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMND 289
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L R + A L K + P+ +YNI++ C G AY + +M G +P
Sbjct: 290 L-GKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVP 348
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ +YR+++ GLC+ A+ +L ML P + ++ ++ L + + + +L
Sbjct: 349 NAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVL 408
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRA 322
M+ + D+ + T++ C E +
Sbjct: 409 EEMEKRKLEFDLESWETIIKSACSENKG 436
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 206/444 (46%), Gaps = 73/444 (16%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
LI + DP A +IF+ S Q F H+N+TY ++ KL + K F +D +L + E
Sbjct: 139 LIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACK 198
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVT--------- 177
+F L+K Y++ ++ F S+ KP PK ++ L LLV
Sbjct: 199 FHEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRK 258
Query: 178 --------------------------HRNYLRPAFDLFKSAHKHGV-LPNTKSYNIMMRA 210
R + AF++ K PN +Y+ +M
Sbjct: 259 LLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDG 318
Query: 211 FCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C NG + A+ LF +M + ++PD +Y +L+ G CR+ + +RA +++E M N G P
Sbjct: 319 LCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCP 378
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ +Y+ L++ LC+ KL++A +L MK G PD + Y +++ F R G+ +A ++L
Sbjct: 379 NVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELL 438
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFD------------------------------- 358
+M N C + V++ ++GGLC +G FD
Sbjct: 439 TEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQN 498
Query: 359 ----VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A K + LM+S+GF PH++ S+ L+ C G ++A L +L+ G P D+W
Sbjct: 499 CELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSW 558
Query: 415 VMIVPQICAGEEMEKLGEVLNEIV 438
+++ IC ++ + E+L+E+V
Sbjct: 559 ELLIDLICRDRKLLYVFELLDELV 582
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 207/434 (47%), Gaps = 45/434 (10%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLI------ASQSDPLLAKEIFDYAS 86
Y S Q P ++ ++ S + P S R++K I S DP A +F+
Sbjct: 348 YKPSQQYHTFRP--KRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLFN-QY 404
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+Q F+H +Y L+ KL R++ F ++ +L L++ + +LF LI+ Y +S +P
Sbjct: 405 QQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMP 464
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++A++ F+ M FNC N +L +LV +L A +F + K G N+ S+NI
Sbjct: 465 EKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFL-DAIGIFDRSTKMGFRRNSISFNI 523
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+++ + G+ A+ +F +M ++ V P V ++ L+ LC K ++ A+ LLZDM+ K
Sbjct: 524 IIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKR 583
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC------------------------ 302
P+ ++Y L+ LC K +EA K++ M +GC
Sbjct: 584 HRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXK 643
Query: 303 -----------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
PD+V YN ++ C+EGRA +A KVL +M GC PN +YR +V G
Sbjct: 644 TLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGF 703
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C F+ K + M+ G P L+ G GK+D AC VLEE+ K H
Sbjct: 704 CQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHL 763
Query: 412 DTWVMIVPQICAGE 425
+ W +V C G+
Sbjct: 764 EAWEALVKDACPGD 777
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 206/417 (49%), Gaps = 39/417 (9%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+ SQ D A +F+ AS++PNF + Y ++L+LGR+ F + IL +KS +
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVT---------- 177
S F LI+ YA+ L D L M+ EF KP NR+L LLV
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 178 ------------------------HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ LRPA + + +G++P+ K++ +M+ +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTL 272
GD+ A + +M E G S +++ G C++ +V A++ +++M N+ GF PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ TL+N LC+ ++ A +++ M +G +PD+ YN+V+ G C+ G +A +VL+ M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ C PN V+Y TL+ LC + + A + +++ SKG P ++LI+G C
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
A + EE+ G P E T+ M++ +C+ KL E LN + ++E+ G R V
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK---GKLDEALNMLKQMELSGCARSV 470
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 173/346 (50%), Gaps = 6/346 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ +LI L RA L IL+ Y + P FT +++ Y E D AL+
Sbjct: 190 STFNVLIKALCRAH--QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFC 212
M+EF C +N I+ + A + + +++ G P+ ++N ++ C
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFC-KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A + + M + G PDV +Y ++ GLC+ +V AV++L+ M+ + P+T+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y TL+++LC++ ++ EA +L + KG PD+ +N+++ G C A ++ E+M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S GC P+ +Y L+ LC +G D A ++ M G + + LI GFC K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
EA + +E+ G + + T+ ++ +C +E +++++++
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 167/326 (51%), Gaps = 13/326 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
KLG K + D +IT +P+ TY LI + N + A + R +
Sbjct: 342 KLGEVKEAVEVLDQMIT-----RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N +++ L RN+ R A +LF+ G P+ +YN+++ + C G + A
Sbjct: 397 LPDVCTFNSLIQGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ +M G V +Y L+ G C+ ++ A ++ ++M G ++++Y TL++ L
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ +++ +A +L+ +M ++G PD YN+++ FCR G A +++ M SNGC P++
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKG--FSPHFSVSHALIKGFCNVGKVDEACGVL 399
V+Y TL+ GLC G +VA K ++ + KG +PH + +I+G K EA +
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLF 633
Query: 400 EELLKAGEAPHED-TWVMIVPQICAG 424
E+L+ EAP + ++ ++ +C G
Sbjct: 634 REMLEQNEAPPDAVSYRIVFRGLCNG 659
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 3/246 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ C + A L + +G++PDV ++ L+QGLC A++L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M +KG PD +Y L++SLC K KL EA +L +M++ GC ++ YNT++ GFC+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ +A ++ ++M +G N V+Y TL+ GLC + A + M MI +G P
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++L+ FC G + +A +++ + G P T+ ++ +C +E ++L I
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI- 601
Query: 439 KVEIKG 444
++KG
Sbjct: 602 --QMKG 605
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI D AL + M C N +++ N R A +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKTREAEE 491
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F HGV N+ +YN ++ C + + A L ++M G PD +Y L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + +A D+++ M + G PD ++Y TL++ LC+ ++ A KLL +++KG N
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 308 HYNTVVLGFCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ G R+ + +A + +M N P+ VSYR + GLC+ G A ++
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 366 LMISKGFSPHFSVSHALIKGF 386
++ KGF P FS + L +G
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGL 692
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILITLKSEHYPVTPSLF 133
A+EIFD R+S TY LI L +++ L+D +++ + P +
Sbjct: 489 AEEIFDEMEVHGVSRNS-VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK------PDKY 541
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY L+ + +A ++M C+P ++ L + A L +S
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-KAGRVEVASKLLRS 600
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKS 250
G+ +YN +++ + A LF +M E+ PD SYRI+ +GLC
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 251 Q-VNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ AVD L ++L KGFVP+ S L L
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI ++ + A K RS+ P N +++ L R A +
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE-AIN 631
Query: 188 LFKSA-HKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ ++ P+ SY I+ R C G I A ++ E+G +P+ S +L +G
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Query: 246 LCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
L S V L+ ++ K F + +S ++ L + +K ++A L
Sbjct: 692 LLTLSMEETLVKLVNMVMQKARFSEEEVS---MVKGLLKIRKFQDALATL 738
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 222/425 (52%), Gaps = 15/425 (3%)
Query: 22 FPPKTPSLIFCYSSSSQESPSSPEQQQESSIS-NSKSPIGSPCRVQKLIASQSDPLLAKE 80
F PK+ FC S + +S +S ++ + ++ PI SP R+ L+ Q DP LA +
Sbjct: 41 FYPKS----FCSQSVNGKSRNSTGHRETNDTQMKTQKPI-SPFRLSSLLRLQKDPTLALQ 95
Query: 81 IF---DYASRQPN--FRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLFT 134
+F + +S +P FR+S +Y ++I KLGRAK F +++IL LK E + +F
Sbjct: 96 LFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFC 155
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
+I Y ++LPDRA + F + F CK K +N +L L+ +R L +F
Sbjct: 156 NVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQ-LEKMTQVFVDISN 214
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G P+ ++NI++ A C GD+ + +F++M +RGV P+V ++ L+ GL S++
Sbjct: 215 YGS-PDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKE 273
Query: 255 AVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ L EDM+ + P+ YTTL+ C +L A+KL M Y+T++
Sbjct: 274 ALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLI 333
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
+ GR + +L +M NGC P+ V+Y ++ G C + + A + M M+ KG
Sbjct: 334 SALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCK 393
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + +I C GK+D+A +LE++ + G P ++ +I +C ++++ +
Sbjct: 394 PDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSI 453
Query: 434 LNEIV 438
L+E++
Sbjct: 454 LDEMI 458
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 2/236 (0%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ +F ++ V+S L+ L + Q+ + + D+ N G PD ++ L++
Sbjct: 170 AFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIH 228
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL- 338
+ C L + + M+ +G P++V + T++ G + +A ++ EDM +
Sbjct: 229 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIK 288
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN Y TL+ G C G + A K + M++ +V LI G+ +E +
Sbjct: 289 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDI 348
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
L E+ + G P T+ I+ C ++E V++E+V+ K D IG
Sbjct: 349 LREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIG 404
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 213/444 (47%), Gaps = 73/444 (16%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
LI ++DP A EIF+ + Q F H+N+TY ++ KL ++K F ID +L + E
Sbjct: 66 LIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCK 125
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAF 186
+F L+K +++ +L +R ++ F ++ KP K ++ L LLV
Sbjct: 126 FHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRK 185
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV-MPDVESYRILMQG 245
L S + PNT +NI+++ C NGDI A+ + +M + V P++ +Y L+ G
Sbjct: 186 FLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLING 245
Query: 246 LCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC ++ A++L E+M++K +PD L+Y L+N C +K+ A K++ MK GCNP
Sbjct: 246 LCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNP 305
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV---------------- 348
++ +Y+ ++ GFC+EGR +A +V ++M S G P+ V Y TL+
Sbjct: 306 NVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELL 365
Query: 349 -------------------GGLCDQGMFDVAKKYMQ------------------------ 365
GGLC +G F+ A+ ++
Sbjct: 366 KDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCRE 425
Query: 366 -----------LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
LM+ +G PHF+ S+ L+ C GKV +A L LL+ G P ++W
Sbjct: 426 GELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSW 485
Query: 415 VMIVPQICAGEEMEKLGEVLNEIV 438
++V IC ++ E+L+++V
Sbjct: 486 ALLVELICRERKLLPAFELLDDLV 509
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAIDACK 327
P+T + L+ C+ + A++++ MK + P+++ Y+T++ G C GR +A +
Sbjct: 198 PNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIE 257
Query: 328 VLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ E+M S + LP+ ++Y L+ G C D A K M+ M G +P+ AL+ GF
Sbjct: 258 LFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGF 317
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G+++EA V +E+ G P + ++ C +++ E+L ++ + + + DT
Sbjct: 318 CKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADT 377
Query: 447 RIVEAGIG 454
+G
Sbjct: 378 VTFNVILG 385
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 190/365 (52%), Gaps = 10/365 (2%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP-VTPS 131
SDP A F +AS+Q F H+ TY L L RA+ ID+ LK+ P +TP+
Sbjct: 2 SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARR---IDETCHILKNGWPPGITPN 58
Query: 132 LFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
+FTY + I +S D+A + M E P N ++ L RN + A D F
Sbjct: 59 VFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAK-ALDYF 117
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+S N ++ IM+ C + A T F KM ++G +P+ +Y +L+ G C+
Sbjct: 118 RSMECE---KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKV 174
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+V+RA LL++M G P+ ++Y+T+++ CR+ K+ AYKL +M GC P++V Y
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
NT++ G CR G +A ++L++M G P+ SY TL+ GLC G D+A K + +
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
P LI G C G++DEAC + E++ + P T+ ++ +C G+ +++
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354
Query: 430 LGEVL 434
+VL
Sbjct: 355 AQQVL 359
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 169/332 (50%), Gaps = 13/332 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ I+I L +A +K + P+ +TY LI + + + RA +
Sbjct: 128 TWTIMIDGLCKANRLPEATTYFAKMKKKG--TVPNEWTYNVLINGFCKVHKVHRAYLLLK 185
Query: 155 SMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
M E P N + V H + + A+ LF+ ++G +PN +YN ++
Sbjct: 186 EMKESGLAP-----NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C NG + AY L ++M ERG+ PD SY LM GLC+ +++ A+ + ED N PD
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+TL+ LC+ +L EA KL +M+ C PD+V + ++ G C+ R +A +VLE
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M C PN+++Y +L+ GLC G A++ + MI +G P+ ++LI GFC
Sbjct: 361 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 420
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
VD A ++EE+ G P T+ ++ +C
Sbjct: 421 GVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 157/290 (54%), Gaps = 1/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ LI ++ D A K F M E +C+P +++ L + L+ A + ++
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG-DRLQEAQQVLETM 362
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
PN +Y+ ++ C G + A +F +M RG+ P+V +Y L+ G C + V
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A+ L+E+M G +PD ++Y TL++ LC+ + EA +L MK K CNPD++ Y+ +
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC+ R A + +DM LP++V++ TLV G C+ G+ D A++ ++ M++
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
SP +L+ GFC VG++ EA VL+ + K G P+ T+ ++ C
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 592
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 169/355 (47%), Gaps = 38/355 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I + D A K FR M+E C P N +L L + + A
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN-GLMDEA 250
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS------------------IAYT----- 222
++L + G+ P+ SY+ +M C G I +AY+
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310
Query: 223 ------------LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
LF KM E PDV ++ LM GLC+ ++ A +LE M ++ P+
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y++L++ LC+ ++R+A ++ RM V+G P++V YN+++ GFC A ++E
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + GCLP++++Y TL+ GLC G A + M +K +P LI GFC +
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 490
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++D A + +++LK P T+ +V C ++ +L E+V + D
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 40/350 (11%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY LI + +N D AL M C P N +++ L A
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC-KTGRAPEA 460
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF P+ +Y+ ++ FC I +A TLF+ M ++ V+PDV ++ L++G
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 520
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C V+ A LLE+M+ PD +YT+L++ C+ ++ EA ++L RM +GC P+
Sbjct: 521 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 580
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL------------------ 347
+V Y ++ FCR G+ A ++LE+M NG PN+++YR+L
Sbjct: 581 VVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILE 640
Query: 348 ------------------VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ GLC G A + ++ + G P + ALI+G C
Sbjct: 641 RLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 700
Query: 390 GKVDEACGVLEEL-LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++ +A VLEE+ L P+ + + ++ ++ E+ + +E++
Sbjct: 701 KELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
++G +V +Y L + L R +++ +L++ G P+ +Y ++ LC+ L
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+A +LL M+ G PD YN V+ C+ A + K L+ S C N++++ ++
Sbjct: 77 KACELLEEMRESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSMECEKNVITWTIMI 133
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC A Y M KG P+ + LI GFC V KV A +L+E+ ++G A
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P+ T+ ++ C +++ ++ ++V+
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 224
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 46/263 (17%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
+L DD+L V P + T+ L++ Y + L D A + M+ +C P
Sbjct: 497 TLFDDML------KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+++ + A + K K G PN +Y ++ AFC G ++AY L +M
Sbjct: 551 SLVDGFC-KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG 609
Query: 230 RGVMP------------------------------------DVESYRILMQGLCRKSQVN 253
GV P D+ +YR++M GLCR +++
Sbjct: 610 NGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMS 669
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCNPDIVHYNTV 312
A++LLE + G P Y L+ LC+ K+L +A ++L M + + P+ Y V
Sbjct: 670 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 729
Query: 313 VLGFCREGRAIDACKVLEDMPSN 335
+ REGR +A + +++ N
Sbjct: 730 IQELAREGRHEEANALADELLGN 752
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 32/172 (18%)
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K +G + ++ YN + R R + C +L++ G PN+ +Y ++ GLC G
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 358 DVAKKYMQLMISKGFSPHFS----VSHAL----------------------------IKG 385
D A + ++ M G P + V HAL I G
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C ++ EA ++ K G P+E T+ +++ C ++ + +L E+
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 187
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 212/432 (49%), Gaps = 39/432 (9%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSL 113
NS + S ++ + SQ+D A +F+ AS++PNF + Y ++L+LGR+ F
Sbjct: 42 NSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDD 101
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRIL 172
+ IL +K+ + S F LI+ YA+ L D L M+ +F KP NR+L
Sbjct: 102 MRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRML 161
Query: 173 ELLVTHRNY----------------------------------LRPAFDLFKSAHKHGVL 198
LLV N LRPA + + +G++
Sbjct: 162 NLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV 221
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ K++ +M+ + GD+ A + +M E G S +++ G C++ +V A++
Sbjct: 222 PDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 259 LEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+++M N+ GF PD ++ TL+N LC+ ++ A +++ M +G +PD+ YN+V+ G C
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ G +A + L+ M + C PN V+Y TL+ LC + + A + +++ SKG P
Sbjct: 342 KLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++LI+G C A + EE+ G P E T+ M++ +C+ KL E LN +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK---GKLDEALNML 458
Query: 438 VKVEIKGDTRIV 449
++E+ G R V
Sbjct: 459 KQMELSGCARSV 470
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 173/346 (50%), Gaps = 6/346 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ +LI L RA L IL+ Y + P FT +++ Y E D AL+
Sbjct: 190 STFNVLIKALCRAH--QLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIR 247
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFC 212
M+EF C +N I+ + A + + +++ G P+ ++N ++ C
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFC-KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A + + M + G PDV +Y ++ GLC+ +V AV+ L+ M+ + P+T+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y TL+++LC++ ++ EA +L + KG PD+ +N+++ G C A ++ E+M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S GC P+ +Y L+ LC +G D A ++ M G + + LI GFC K+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
EA + +E+ G + + T+ ++ +C +E +++++++
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 166/326 (50%), Gaps = 13/326 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
KLG K D +IT +P+ TY LI + N + A + R +
Sbjct: 342 KLGEVKEAVEFLDQMIT-----RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N +++ L RN+ R A +LF+ G P+ +YN+++ + C G + A
Sbjct: 397 LPDVCTFNSLIQGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ +M G V +Y L+ G C+ +++ A ++ ++M G ++++Y TL++ L
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ +++ +A +L+ +M ++G PD YN+++ FCR G A +++ M SNGC P++
Sbjct: 516 CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKG--FSPHFSVSHALIKGFCNVGKVDEACGVL 399
V+Y TL+ GLC G +VA K ++ + KG +PH + +I+G K EA +
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPH--AYNPVIQGLFRKRKTTEAINLF 633
Query: 400 EELLKAGE-APHEDTWVMIVPQICAG 424
E+L+ E AP ++ ++ +C G
Sbjct: 634 REMLEQNEAAPDAVSYRIVFRGLCNG 659
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 3/246 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ C + A L + +G++PDV ++ L+QGLC A++L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M +KG PD +Y L++SLC K KL EA +L +M++ GC ++ YNT++ GFC+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ +A ++ ++M +G N V+Y TL+ GLC + A + M MI +G P
Sbjct: 483 ANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFT 542
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++L+ FC G + +A +++ + G P T+ ++ +C +E ++L I
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI- 601
Query: 439 KVEIKG 444
++KG
Sbjct: 602 --QMKG 605
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI D AL + M C N +++ N +R A +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKIREAEE 491
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F HGV N+ +YN ++ C + + A L ++M G PD +Y L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFC 551
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + +A D+++ M + G PD ++Y TL++ LC+ ++ A KLL +++KG
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPH 611
Query: 308 HYNTVVLGFCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ G R+ + +A + +M N P+ VSYR + GLC+ G A ++
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 366 LMISKGFSPHFSVSHALIKGF 386
++ KGF P FS + L +G
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGL 692
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+EIFD R+S TY LI L +++ ++ + E P FTY
Sbjct: 489 AEEIFDEMEVHGVSRNS-VTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK--PDKFTYNS 545
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + +A ++M C+P ++ L + A L +S
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-KAGRVEVASKLLRSIQMK 604
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQ-VN 253
G+ +YN +++ + A LF +M E+ PD SYRI+ +GLC +
Sbjct: 605 GIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIR 664
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
AVD L ++L KGFVP+ S L L
Sbjct: 665 EAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 213/419 (50%), Gaps = 38/419 (9%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D + EIF +A Q + HS S Y +LI KLG A F +ID +L+
Sbjct: 70 TPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQ 129
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E SLF ++K Y + LP +A + M + C+P + N +L++LV
Sbjct: 130 MKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVG- 188
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N A ++F GV PN ++ ++M+A C ++ A L M + G +P+ Y
Sbjct: 189 NCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIY 248
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L+ L ++ +V+ A+ LLE+M G PD ++ T++ CR ++ E KL+ RM +
Sbjct: 249 QTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMIL 308
Query: 300 KG---------------C----------------NPDIVHYNTVVLGFCREGRAIDACKV 328
KG C P++VH+NT+V GF R GR +A
Sbjct: 309 KGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAF 368
Query: 329 LED-MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ D M +NG +P++ ++ TLV GLC +G+F A + + M +KG P+ + LI GFC
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA----GEEMEKLGEVLNEIVKVEI 442
G+++EA +L E+L G + + + ++ +C E ++ GE+ ++ K +I
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDI 487
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 149/298 (50%), Gaps = 7/298 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRP 184
P +FT+ L+ + L AL+ M CKP LN L+ + L
Sbjct: 379 VPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKP---NLNTYTILIDGFCKKGQLEE 435
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + G NT YN ++ A C +G I A +F +M +G PD+ ++ L+
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIF 495
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLCR ++ A+ L DM+ +G + +++++ TL+++ R+ +++EA KL+ M +GC
Sbjct: 496 GLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL 555
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + YN ++ C+ G + E+M G P++++ L+ G C G A ++M
Sbjct: 556 DEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFM 615
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ MI +GFSP ++LI G C G++ EA + E+L G P T+ ++ +C
Sbjct: 616 RDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 125/244 (51%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G +P+ +++ ++ C G A L N M +G P++ +Y IL+ G C+K Q+
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +L +ML KGF +T+ Y L+++LC+ K+ EA + M KGC PDI +N+++
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIF 495
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G CR DA + DM G + N V++ TL+ +G A K + M+ +G
Sbjct: 496 GLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL 555
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ LIK C G V++ G+ EE+++ G P T +++ C ++ E +
Sbjct: 556 DEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFM 615
Query: 435 NEIV 438
+++
Sbjct: 616 RDMI 619
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 5/304 (1%)
Query: 83 DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAE 142
D +PN +TY ILI + IL + ++ + + + LI +
Sbjct: 409 DAKGCKPNL----NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCK 464
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
AL F M CKP N ++ + + + A L++ GV+ N+
Sbjct: 465 HGKIHEALDMFGEMSSKGCKPDIFTFNSLI-FGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
++N ++ AF G+I A L N M RG D +Y L++ LC+ V + + L E+M
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ KG P ++ L+N C K+ A + + M +G +PDIV YN+++ G C+ GR
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A + E + + G P+ ++Y TL+ LC +G FD A + + GF P+ + L
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703
Query: 383 IKGF 386
+ F
Sbjct: 704 VYNF 707
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 31/339 (9%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK----------QLNRILELLVTHRNY 181
++ LI ++ + D ALK M C P +LNR+LE
Sbjct: 247 IYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM 306
Query: 182 LRPAF---DLFKSAHKHGVL-----------------PNTKSYNIMMRAFCFNGDISIAY 221
+ F D+ HG+ PN +N ++ F NG ++ A
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEAT 366
Query: 222 T-LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+++KM G +PDV ++ L+ GLC+K A++L+ DM KG P+ +YT L++
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C+K +L EA +L M KG + + V YN ++ C+ G+ +A + +M S GC P+
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ ++ +L+ GLC + A + M+ +G + + LI F G++ EA ++
Sbjct: 487 IFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVN 546
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++L G E T+ ++ +C +EK + E+++
Sbjct: 547 DMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIR 585
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + ALK ML C PL + L + + LF+
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGC-PLDEITYNGLIKALCKTGAVEKGLGLFEEM 583
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ P+ + NI++ FC G + A M RG PD+ +Y L+ GLC++ ++
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A++L E + +G PD+++Y TL+ LCR+ +A LL R G P+ V +N +
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703
Query: 313 VLGFCREGRA 322
V F ++ +
Sbjct: 704 VYNFGKQSNS 713
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 195/408 (47%), Gaps = 39/408 (9%)
Query: 43 SPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI 102
+P E S++ S I + Q L ++ A+ F +A R P F HS +Y IL+
Sbjct: 56 NPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILV 115
Query: 103 LKLGRAKYFSLIDDILITLK-SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
LG +K F+L+ D LI ++ S+ + ++P +F + + Y+ +NLP A++ F M+EF
Sbjct: 116 DILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGL 175
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR------------ 209
KP L+++L +L R + + A +F KH K+Y+I++R
Sbjct: 176 KPTIDDLDQLLYVLCK-RKHAKHAQQIFDRV-KHQFQTRAKTYSILVRGWGDIGESVSAC 233
Query: 210 -----------------------AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
AFC G +S AY +F +M G+ PD ++ I ++
Sbjct: 234 KVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAY 293
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C + ++ A +L++M VP+ +Y ++ LC+K+K+ EAY+LL + + PD
Sbjct: 294 CEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDA 353
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ C A +++ M + CLP+ SY L+ L G FD A + +
Sbjct: 354 WSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWES 413
Query: 367 MISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDT 413
M KGF P S ++ G C GK++EAC E ++ G P+ T
Sbjct: 414 MGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSST 461
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ L++ + + A K F M E C N +LE + A+ +F+
Sbjct: 216 YSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKG-GKVSEAYKMFREM 274
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G+ P+ +++I +RA+C DI +AY + ++M ++P+V +Y +++ LC+K +V
Sbjct: 275 GSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKV 334
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A LL +++ + PD SY +L C ++ A +L+ RM C PD YN +
Sbjct: 335 EEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNML 394
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYMQLMISKG 371
+ R GR A +V E M G P++ +Y +V GLC +G + A KY ++MI +G
Sbjct: 395 LKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEG 454
Query: 372 FSPHFSVSHALIKGFCNVGKVD 393
P+ S L +G +D
Sbjct: 455 IPPYSSTVEILRNRLIGLGLLD 476
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 39/419 (9%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
+ P +++ ++S++ +P + DP+ A +F + Q F+ +Y L
Sbjct: 13 AKPRHRRKGHKTSSRNRNDAP--FVNHVKEARDPVEALTLF-HEYLQRGFKPDYPSYAAL 69
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
+ KL R + F ++++L ++ ++ ++F L + Y ++ L +A++ F M FNC
Sbjct: 70 LYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQHYGKAQLVHKAVELFNRMTRFNC 129
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
+ LN +L +LV + +L A +LF ++ G N+ ++N+M++ + G+ A
Sbjct: 130 VRTSQSLNSLLNVLVDNGWFLE-ANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQAS 188
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+F++M ER V P V +Y L+ LCR ++++A LLEDM+ KG P+ +++ L+
Sbjct: 189 KVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFALLMEGS 248
Query: 282 CRKKKLREAYKLLCRMKVKGCNP-----------------------------------DI 306
C + EA K++ M+ +GC P D+
Sbjct: 249 CLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDV 308
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN ++ C+EGRA DA +VL +M GC N +YR LV G C G F+ K +
Sbjct: 309 VTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNA 368
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M++ G P +L+ G G +D AC VLEE+ K D W +V + C G+
Sbjct: 369 MLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQMMFCADDWEALVMESCRGD 427
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCR------------------------------- 248
A TLF++ +RG PD SY L+ L R
Sbjct: 47 ALTLFHEYLQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQ 106
Query: 249 ---KSQ-VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
K+Q V++AV+L M V + S +LLN L EA +L + G
Sbjct: 107 HYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRL 166
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V +N ++ G+ +G A KV ++M P++V+Y +L+G LC G D AK +
Sbjct: 167 NSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLL 226
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI KG P+ L++G C +G+ +EA ++ ++ G P + +++ +
Sbjct: 227 EDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKR 286
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
++++ VL+E+ K +K D
Sbjct: 287 GKIDEAKSVLHEMKKRHMKPDV 308
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 231/513 (45%), Gaps = 78/513 (15%)
Query: 4 RAFLRSSKIVTTVTG-AVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSI-SNSKSPIGS 61
R F ++++T + + +FP +P +S ++ P SP + + + + K S
Sbjct: 2 RFFCHKHRLLSTSSATSYSFPWISP---LQFSKAAPLVPDSPTETSSTLVETGRKCKFIS 58
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
LI + DP A EIF+ Q F H+++TY LI KL + K F +D +L +
Sbjct: 59 HESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQM 118
Query: 122 KSEHYPVTPSLFTYLIK------------------------------------IYAESNL 145
E ++F L+K I ES
Sbjct: 119 TYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQ 178
Query: 146 PDRALK----------------TFRSMLEFNCKP--LPKQLNRILELLVTHRNY------ 181
D A K F +++ +CK L L + E+ + R+Y
Sbjct: 179 IDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITY 238
Query: 182 ------------LRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
L+ A +LF+ K +LP+ +Y+++++ FC G A + M
Sbjct: 239 STLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMR 298
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G P+V +Y +LM G C++ ++ A ++ ++M + G PDT+ YTTL+N C ++
Sbjct: 299 SNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRID 358
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA +LL M C D V +N ++ G CREGR +A ++LE++ G N SYR ++
Sbjct: 359 EAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVL 418
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC +G + + + LM+S+GF PH++ S+ L+ C G VD A L L + G
Sbjct: 419 NFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFT 478
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
P +W ++ IC ++ + E+++E+V+ E
Sbjct: 479 PEPKSWAHLIEYICRERKLLFVFELVDELVEKE 511
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLC----RMKVKGCNPDIVHYNTVVLGFCREGRAID 324
P + +T LN L K++ A K L +KV+ P+ +N +V C+ G
Sbjct: 161 PSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVR---PNTCIFNILVKHHCKSGDLES 217
Query: 325 ACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPHFSVSHAL 382
A +V+ +M S PN+++Y TL+ GLC G A + + M+SK P L
Sbjct: 218 ALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVL 277
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
IKGFC+ GK D A ++E + G P+ + +++ C +E+ EV +E+ +
Sbjct: 278 IKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGL 337
Query: 443 KGDT 446
K DT
Sbjct: 338 KPDT 341
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 225/502 (44%), Gaps = 87/502 (17%)
Query: 13 VTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQ 72
+ V+ V T +F S Q+ S E++I KLI ++
Sbjct: 15 IGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAI--------------KLIKNE 60
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
DP A +IF+ S Q F H+++TY +I L + K F ID +L + + V +
Sbjct: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI 120
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
F L+K +++S++ +R L F ++ KP K ++ L LLV L +
Sbjct: 121 FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA 180
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAY--------------------TLFNKMFERG 231
K + PNT +NI+++ C NGD+ A+ TL + E G
Sbjct: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
Query: 232 -----------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG-------- 266
++PD +Y IL+ G C++ +V+RA +LE M + G
Sbjct: 241 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 300
Query: 267 ---------------------------FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
PDT+SYTTL+N LCR ++ EA +LL +MK
Sbjct: 301 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K C D V +N ++ G CREGR +A +++ +P G N SYR ++ L +G
Sbjct: 361 KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK 420
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + LM+++GF PH + S+ L+ CN G V +A L LL+ G P ++W +V
Sbjct: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
Query: 420 QICAGEEMEKLGEVLNEIVKVE 441
IC +M + E+L+ +V E
Sbjct: 481 LICRERKMLPVFELLDVLVTQE 502
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 2/191 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
AKE+F+ + + +Y LI L R ++L +K + F ++
Sbjct: 316 AKEVFNEI-KSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVML 374
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
D AL + L F L K RI+ +T + LR A +L G
Sbjct: 375 GGLCREGRFDEALDMVQK-LPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGF 433
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P+ + N ++ C NG + A + E G P+ ES+ L+ +CR+ ++ +
Sbjct: 434 VPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFE 493
Query: 258 LLEDMLNKGFV 268
LL+ ++ + ++
Sbjct: 494 LLDVLVTQEYL 504
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 211/445 (47%), Gaps = 75/445 (16%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
LI + DP A IF+ S Q F+H+N+TY ++ KL R F +D +L + E
Sbjct: 99 LIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCK 158
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAF 186
+F L+K +++S+L ++ L + S+ KP PK L+ L LL+ N + A
Sbjct: 159 FHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLD-SNRVDLAR 217
Query: 187 DLFKSAHKHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV-MPDVESYRILMQ 244
L A + PN +NI+++ C NGD+ A+ + +M P++ +Y LM
Sbjct: 218 KLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMD 277
Query: 245 GLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLCR +V A DL E+M+++ VPD L+Y L+N CR K A ++ MK GC
Sbjct: 278 GLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCY 337
Query: 304 PDIVHYNTVVLG-----------------------------------FCREGRAIDACKV 328
P++ +Y+ +V G CR G++ +A ++
Sbjct: 338 PNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIEL 397
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV----------------------------- 359
LE+M NGC + V++ L+GGLC +G F+
Sbjct: 398 LEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQ 457
Query: 360 ------AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
AK+ + LM+ +GF PH++ S+ L+ C G VD+A L +L++ G P +T
Sbjct: 458 KCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLET 517
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIV 438
W +++ IC ++ + E+L+E+V
Sbjct: 518 WEVLIGLICRERKLLYVFELLDELV 542
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 186/357 (52%), Gaps = 4/357 (1%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
V +LI ++ D A +FD A+ + FRH + T+ ++I +L F + +L +K
Sbjct: 18 VVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMK 77
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
E VT +F + + Y + P A++ F M F +P K IL++LV N++
Sbjct: 78 QEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILV-EENHV 136
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRI 241
+ A ++ + G+ + S NI+++A C N + + A +F +M RG PD +Y
Sbjct: 137 KRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGT 196
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLCR ++ A +L ++M KGF ++YT+L++ LC+ L EA LL MK
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++ Y++++ G C+ G + A ++LE M LPN+V+Y TL+ GLC + A
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + M +G P+ + +I G C G EA ++E++ G +P+ +W + V
Sbjct: 317 EILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHV 373
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 5/265 (1%)
Query: 165 PKQL-NRILELLVTHRNYLRPAFDLFKSA---HKHGVLPNTKSYNIMMRAFCFNGDISIA 220
PKQ+ N ++ L+ + A ++F SA + +G + +++ +++ A
Sbjct: 10 PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ +M + M + + + +G R + A+ + M P +Y T+L+
Sbjct: 70 EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLP 339
L + ++ A M+ G +V N ++ C+ +D A ++ ++MP+ GC P
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQP 189
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ +Y TL+ GLC G AK+ + M KGFS +LI G C +DEA G+L
Sbjct: 190 DSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLL 249
Query: 400 EELLKAGEAPHEDTWVMIVPQICAG 424
EE+ + P+ T+ ++ +C G
Sbjct: 250 EEMKRNDIEPNVFTYSSLMDGLCKG 274
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 127/283 (44%), Gaps = 8/283 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L R S ++ ++ + + + +T LI +SN D A+ M
Sbjct: 193 TYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEM 252
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +P + +++ L + A L + K LPN +Y+ ++ C
Sbjct: 253 KRNDIEPNVFTYSSLMDGLCKG-GHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERK 311
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT- 275
+ A + ++M +G+ P+ Y ++ GLC A + +++M+ G P+ S++
Sbjct: 312 LREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSL 371
Query: 276 ------TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
++ LC A++L M+ + + +I ++ +V FC+ G A ++L
Sbjct: 372 HVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARIL 431
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
E+M +GC+P+ + ++GGL D+ A + + + + + F
Sbjct: 432 EEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKF 474
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF L+ S + +++ +++ FC GD+ A + +M G +PD + +++
Sbjct: 392 AFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIG 451
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFV 268
GL + +V A + L L + FV
Sbjct: 452 GLWDRKKVREATEQLLVELQQKFV 475
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 213/432 (49%), Gaps = 41/432 (9%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
S+ NS I +P ++ KL+ + + E+F + Q +RHS Y +LI KLG
Sbjct: 68 SLRNSFHKI-TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGE 126
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE----FNCKPLPK 166
F ID +LI +K E SLF +++ Y ++ P +T R MLE ++C+P K
Sbjct: 127 FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG---QTTRLMLEMRNVYSCEPTFK 183
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +LE+LV+ N + A ++F + P ++ ++M+AFC +I A +L
Sbjct: 184 SYNVVLEILVSG-NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + G +P+ Y+ L+ L + ++VN A+ LLE+M G VPD ++ ++ LC+ +
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 287 LREAYKLLCRMKVKGCNPD-------------------------------IVHYNTVVLG 315
+ EA K++ RM ++G PD IV +NT++ G
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 316 FCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
F GR DA VL DM S G +P++ +Y +L+ G +G+ +A + + M +KG P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ L+ GFC +GK+DEA VL E+ G P+ + ++ C + + E+
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 435 NEIVKVEIKGDT 446
E+ + K D
Sbjct: 483 REMPRKGCKPDV 494
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 3/301 (0%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y + P + TY LI Y + L AL+ M CKP +++ +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF-CKLGKID 441
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A+++ G+ PNT +N ++ AFC I A +F +M +G PDV ++ L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC ++ A+ LL DM+++G V +T++Y TL+N+ R+ +++EA KL+ M +G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D + YN+++ G CR G A + E M +G P+ +S L+ GLC GM + A ++
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ +G +P ++LI G C G++++ + +L G P T+ ++ +C
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 424 G 424
G
Sbjct: 682 G 682
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 151/286 (52%), Gaps = 5/286 (1%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
KP N ++ VTH L +G++P+ +YN ++ + G + +A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + M +G P+V SY IL+ G C+ +++ A ++L +M G P+T+ + L+++
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ ++ EA ++ M KGC PD+ +N+++ G C A +L DM S G + N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLE 400
V+Y TL+ +G A+K + M+ +G SP +++ +LIKG C G+VD+A + E
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++L+ G AP + +++ +C +E+ E E+V ++G T
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV---LRGST 631
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + + + A++ FR M CKP N ++ L + ++ A L +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL-CEVDEIKHALWLLRDM 520
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
GV+ NT +YN ++ AF G+I A L N+M +G D +Y L++GLCR +V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A L E ML G P +S L+N LCR + EA + M ++G PDIV +N++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR GR D + + + G P+ V++ TL+ LC G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF---------------- 684
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
V +AC +L+E ++ G P+ TW +++ I E +++
Sbjct: 685 -------------------VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ G PN SY I++ FC G I AY + N+M G+ P+ + L+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C++ ++ AV++ +M KG PD ++ +L++ LC +++ A LL M +G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V YNT++ F R G +A K++ +M G + ++Y +L+ GLC G D A+
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G +P + LI G C G V+EA +E++ G P T+ ++ +C
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 425 EEME 428
+E
Sbjct: 648 GRIE 651
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 194/379 (51%), Gaps = 7/379 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D + IF +A Q + H+ Y +LI KLG AK F +ID +L+
Sbjct: 68 TPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQ 127
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E SLF ++K Y +NLP +A + M + C+P K N +L++LV+
Sbjct: 128 IKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVS-A 186
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N A ++F GV+P ++ ++M+A C ++ A +L M + G +P+ Y
Sbjct: 187 NCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVY 246
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L+ L ++ +VN A+ LLE+M G +PD ++ ++ LCR ++ E KL+ RM
Sbjct: 247 QTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLF 306
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P+ + Y ++ G CR G+ +A +L +P+ PN V + L+ G G D
Sbjct: 307 RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDE 362
Query: 360 AKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++ MI G P + LI G C G + A ++ ++ G P+ T+ ++
Sbjct: 363 ANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLL 422
Query: 419 PQICAGEEMEKLGEVLNEI 437
C ++E+ G VLNE+
Sbjct: 423 DGFCKKNQLEEAGYVLNEM 441
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 6/250 (2%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L+ K+G P+ ++N ++ C G + A + N M G P++ +Y L+ G C
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K+Q+ A +L +M KGF + + Y LL +LC+ K+ +A +L M KGC PDI
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C+ R DA + DM +G + N V+Y TL+ G A K + M
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G + LIK FC +G ++A G+ +E+++ P + +++ +C
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLC----- 601
Query: 428 EKLGEVLNEI 437
++G+V N +
Sbjct: 602 -RVGKVCNAL 610
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 5/313 (1%)
Query: 133 FTYLIKIYAESNLPDRALK-TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
FT LI Y +S D A + M++ C+P N ++ L + + A D+
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGL-CKKGLMGSAVDMVND 405
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+G PN +Y ++ FC + A + N+M +G ++ Y +L++ LC+ +
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V +A+D+L +M +KG PD ++ TL+ LC+ + +A L M + G + V YNT
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ F R G +A K++ DM GC + ++Y L+ C G + A M+ K
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + LI G C VGKV A +L +++ G AP T+ ++ +C +M +
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC---KMGNIR 642
Query: 432 EVLNEIVKVEIKG 444
E N K++ +G
Sbjct: 643 EAFNLFNKLQAEG 655
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 141/295 (47%), Gaps = 3/295 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FT+ LI + L A+ M C P +L+ +N L A
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF-CKKNQLEEAGY 436
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G N YN+++RA C NG + A + +M ++G PD+ ++ L+ GLC
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC 496
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A+ L DML G + +T++Y TL+++ R ++EA KL+ M +GC D +
Sbjct: 497 KVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEI 556
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ FC+ G A + ++M +P+ +S L+ GLC G A + ++ M
Sbjct: 557 TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
I +G +P ++LI G C +G + EA + +L G P T+ ++ C
Sbjct: 617 IHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR-ILELL 175
+L + ++ + + + L++ ++ +AL M + CKP N I L
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC 496
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
R A L++ GV+ NT +YN ++ AF G I A L N M RG D
Sbjct: 497 KVDRK--EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLD 554
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y L++ C+ +A+ L ++M+ K VP +S L+N LCR K+ A +LL
Sbjct: 555 EITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLR 614
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M +G PD+V YN+++ G C+ G +A + + + G P+ ++Y TL+ C G
Sbjct: 615 DMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAG 674
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTW 414
MFD A + + F P+ + L+ F +GK E + G A
Sbjct: 675 MFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGK--------ENGISFGTAK----- 721
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++P IC + LG VL+ +
Sbjct: 722 --VIPSICIQVQNIFLGAVLHNM 742
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 200/382 (52%), Gaps = 5/382 (1%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P R+ +I Q + LA +IFDYA + P F H+ TY +I KL RA+ F ++ +L
Sbjct: 15 PKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQ 74
Query: 121 L--KSEHYPVTPSLFTYLIKIYAESNLPDRALKTF-RSMLEFNCKPLPKQLNRILELLVT 177
L S H +F +I+ Y + P ALKTF R EF+ +P K LN +L + V
Sbjct: 75 LSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQ 134
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
++ Y L K+GVLPN S+NI+++A C D+ A +F++M G++P++
Sbjct: 135 NKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLV 194
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y ++ G + + A + ++ +KG++PD +YT L+ C++ +L +A K++ M
Sbjct: 195 TYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNM 254
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ G P+ V Y ++ +C+E ++ +A +++DM LP+ ++ LC+ G
Sbjct: 255 EYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKV 314
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A + M+ K P ++ LI C GKV EA + +E + G P T+ +
Sbjct: 315 ENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTL 373
Query: 418 VPQICAGEEMEKLGEVLNEIVK 439
+ +C E+ + G + +++V+
Sbjct: 374 IAGMCERGELNEAGRLWDDMVE 395
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 164/373 (43%), Gaps = 45/373 (12%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAES 143
S QP+ + N+ + + + K + L+ L K + Y V P++F++ LIK +
Sbjct: 117 SMQPSVKLLNTLLNVFV----QNKRYHLVGSTLKNCK-DKYGVLPNVFSFNILIKALCKK 171
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N + ALK F M P IL V+ R L A +F G LP+ +
Sbjct: 172 NDVENALKVFDEMPTMGMIPNLVTYTTILGGFVS-RGDLVNAEKVFSEISDKGWLPDATT 230
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y ++M +C G +S A + + M GV P+ +Y +++ C++ + A +L++DML
Sbjct: 231 YTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDML 290
Query: 264 NKGFVP-----------------------------------DTLSYTTLLNSLCRKKKLR 288
+K F+P D +TL++ LC++ K+
Sbjct: 291 DKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVW 350
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA KL + +G P ++ YNT++ G C G +A ++ +DM C PN +Y L+
Sbjct: 351 EARKLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLI 409
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G G+ + ++ M+ G P+ S LI+G G + V+ + + E
Sbjct: 410 KGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASREV 469
Query: 409 PHEDTWVMIVPQI 421
D+W + + +I
Sbjct: 470 -DADSWDLFLHKI 481
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILI------LKLGRAKYFSLIDDILITLKSEHY 126
SD + + +Y +PN TY ++I K G A+ +LIDD+L + +
Sbjct: 245 SDAIKVMDNMEYNGVEPN----EVTYGVMIDAYCKEKKSGEAR--NLIDDML----DKKF 294
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL--RP 184
+ +L +I + E + A ++ MLE NC P ++ ++ L R
Sbjct: 295 LPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARK 354
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
FD F+ G +P+ +YN ++ C G+++ A L++ M E+ P+ +Y +L++
Sbjct: 355 LFDEFE----QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIK 410
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
G + V V +LE+ML+ G +P+ +YT L+ L
Sbjct: 411 GFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 195/408 (47%), Gaps = 31/408 (7%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
S V K++ + D + + E F S F+H++ TY +I KLGR + +L
Sbjct: 40 SESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQ 99
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K E+ P + LF ++IK Y SNL ++ LK F + EF C+P K N +L+ L++ +N
Sbjct: 100 MKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLS-QN 158
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD----- 235
+ L+ + G+ PN +YN++++A C NG + A L +M +G PD
Sbjct: 159 LFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYT 218
Query: 236 -------------------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
V Y L+ G+C++ + A DL+ +M+++G P+
Sbjct: 219 TVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPN 278
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+SY+T+++ L + + + RM V+GC P++ + +++ GF GR DA +
Sbjct: 279 VISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWN 338
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M G PN+V+Y TL+ GLC G D A M P+ + +I GF G
Sbjct: 339 LMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ AC +++ G P+ + +V +C ++ ++++ ++
Sbjct: 399 DLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMI 446
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 33/362 (9%)
Query: 84 YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYA 141
Y R+ S Y +++ L F +I+ + +KSE + P++FTY L+K
Sbjct: 133 YRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSE--GLEPNVFTYNVLLKALC 190
Query: 142 ESNLPDRALKTFRSMLEFNCKP-------------------LPKQLNRILELLVTHRNYL 182
++ D A K M C P ++L E +V N L
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNAL 250
Query: 183 ----------RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ AFDL GV PN SY+ ++ G++ ++ +F +MF RG
Sbjct: 251 IHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGC 310
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P+V+++ L++G + +V AV L M+ +G P+ ++Y TL++ LC + EA
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAIS 370
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ +M+ P++ Y+T++ GF + G + AC+ M + GC PN+V Y +V LC
Sbjct: 371 VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
MFD A + MIS G P + IKG C G+V+ A VL+++ K P+
Sbjct: 431 QMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIR 490
Query: 413 TW 414
T+
Sbjct: 491 TY 492
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 39/350 (11%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ +Y I S++ + +L F M C+P + +++ R + A
Sbjct: 275 VDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFV-RGRVGDA 333
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L+ + GV PN +YN ++ C +G++ A +++N+M + + P+V +Y ++ G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + A + M+N G P+ + YT +++ LC+ +A+ L+ M GC P
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL------------------------ 341
++ +N + G CR GR A VL+ M CLPN+
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR 513
Query: 342 -----------VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
V+Y T++ G GM + + M+ G + + +C +G
Sbjct: 514 ELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLG 573
Query: 391 KVDEACGVLEELLKAGEAPHE-DTWVMIVPQICAGEEMEKLGEVLNEIVK 439
KV A VL+ + E + T +I+ IC E+ L+E++K
Sbjct: 574 KVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLK 623
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 146/360 (40%), Gaps = 52/360 (14%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LIK + A+ + M+ P N ++ L + N + A ++
Sbjct: 317 FTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGN-MDEAISVWNQM 375
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K + PN +Y+ ++ F +GD+ A +NKM G P+V Y ++ LC+ S
Sbjct: 376 EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMF 435
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI------ 306
++A DL+++M++ G P +++ + LCR ++ A +L +M+ C P+I
Sbjct: 436 DQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNEL 495
Query: 307 -----------------------------VHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
V YNT++ GF G ++L M NG
Sbjct: 496 LDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGI 555
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+ ++ T V C G A K + + K F ++ G CN +EA
Sbjct: 556 KLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAV 615
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
L E+LK G P+ TW ++V KLG + G RI++ IG++
Sbjct: 616 VYLHEMLKRGIFPNIATWNVLVRGF-----FSKLGHM----------GPIRILDDIIGMD 660
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 124 EHYPVTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + P++ TY IY + D A +T+ M+ C+P ++++L +
Sbjct: 376 EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVL-CQMSM 434
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
AFDL + G P ++N ++ C G + A + ++M + +P++ +Y
Sbjct: 435 FDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNE 494
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL R + A L+ ++ + D ++Y T++ ++ +LL +M V G
Sbjct: 495 LLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG 554
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLCDQGMFDVA 360
D + NT V +C+ G+ A KVL+++ + +++++ ++ G+C+ + A
Sbjct: 555 IKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEA 614
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGF 386
Y+ M+ +G P+ + + L++GF
Sbjct: 615 VVYLHEMLKRGIFPNIATWNVLVRGF 640
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F LID+++ S+ P T F IK + + A+ M ++ C P + N
Sbjct: 439 FDLIDNMI----SDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNE 494
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L+ L N R A L + + V + +YN +M F FNG L KM
Sbjct: 495 LLDGLF-RANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVN 553
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G+ D + + C+ +V A+ +L+++ K F D +++T +L +C E
Sbjct: 554 GIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEE 613
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
A L M +G P+I +N +V GF + + ++L+D+
Sbjct: 614 AVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDI 656
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 214/442 (48%), Gaps = 24/442 (5%)
Query: 7 LRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSP-------EQQQESSISNSKSPI 59
++ I+ + +FP K SL + S+ PS+ Q + ++ ++ I
Sbjct: 7 FNTNSILKALNNLFSFPSKFLSLSMHSNFSAHAIPSTKTIETEPLNHTQHCNTTDQENGI 66
Query: 60 GSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+ DP ++ +IF + ++R +ST+ LI F ++ +L
Sbjct: 67 ------------EPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLD 114
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTH 178
+K E + F + K Y +++LP++A+ F M EF CK K N +L +++
Sbjct: 115 RMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQE 174
Query: 179 RNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ R A + + A + PN ++N++++A C G + A +F M R PD
Sbjct: 175 GLFHR-ALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPD 233
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y LM GLC+ +++ AV LL++M G P +++ L+N LC+K L A KL+
Sbjct: 234 VYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVD 293
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M +KGC P+ V YNT++ G C +G+ A +L+ M S+ C+PN+V+Y T++ GL QG
Sbjct: 294 NMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQG 353
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
+ LM +G+ + V LI G GK EA + +E+ G + +
Sbjct: 354 RALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYS 413
Query: 416 MIVPQICAGEEMEKLGEVLNEI 437
++ +C + + EVL+E+
Sbjct: 414 AVIDGLCRDGKPDDAVEVLSEM 435
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 164/321 (51%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ T+ +IK + L D A++ FR M C+P +++ L + + A
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLC-KADRIDEA 253
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G P+ ++N+++ C GD+S A L + MF +G +P+ +Y L+ G
Sbjct: 254 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHG 313
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC K ++ +A+ LL+ M++ VP+ ++Y T++N L ++ + + +L M+ +G +
Sbjct: 314 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVN 373
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y+T++ G +EG++ +A + ++M G N + Y ++ GLC G D A + +
Sbjct: 374 EYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS 433
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +KG +P+ +L+KGF G A V +++ K +E + +++ +C
Sbjct: 434 EMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDG 493
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
++++ V +++ K D
Sbjct: 494 KVKEAMMVWTQMLGKGCKPDV 514
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A LFK G NT Y+ ++ C +G A + ++M +G P+ + L
Sbjct: 391 QEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSL 450
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
M+G +RAV++ +DM F + + Y+ L++ LC+ K++EA + +M KGC
Sbjct: 451 MKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGC 510
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG--CLPNLVSYRTLVGGLCDQGMFDVA 360
PD+V Y++++ G G DA ++ +M G P++V+Y L+ LC Q A
Sbjct: 511 KPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRA 570
Query: 361 KKYMQLMISKGFSPHFSVS---------------------HALIKGFCNVGKVDEACGVL 399
+ M+ +G P L+ +V A ++
Sbjct: 571 IDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIV 630
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
E +L+ P TW +V +C ++++ +
Sbjct: 631 EVMLQKLLPPKHSTWARVVENLCKPKKVQAV 661
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 254 RAVDLLEDMLNKGFVPDT-LSYTTLLNSLCRK---KKLREAYKLLCRMKVKGCNPDIVHY 309
+AVDL + M + T S+ ++LN + ++ + E Y + K +P+++ +
Sbjct: 143 KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTF 202
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N V+ C+ G DA +V DM C P++ +Y TL+ GLC D A + M
Sbjct: 203 NLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 262
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G P + LI G C G + A +++ + G P+E T+ ++ +C ++EK
Sbjct: 263 DGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEK 322
Query: 430 LGEVLNEIV 438
+L+ +V
Sbjct: 323 AISLLDRMV 331
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 129 TPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH----RNYL 182
TP+ +T L+K + E+ RA++ ++ M + N N + ++ H +
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQ-----NEVCYSVLIHGLCKDGKV 495
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYR 240
+ A ++ G P+ +Y+ M+ G + A L+N+M +G PDV +Y
Sbjct: 496 KEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYN 555
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
IL+ LC++S ++RA+DLL ML++G PD ++ T L L
Sbjct: 556 ILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ LI + A+ + ML CKP + ++ L + + A L+
Sbjct: 482 YSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL-SIAGLVEDAMQLYNEM 540
Query: 193 HKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ------ 244
G P+ +YNI++ C IS A L N M +RG PD+ + I ++
Sbjct: 541 LCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKL 600
Query: 245 ---------------GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
L ++ +V A ++E ML K P ++ ++ +LC+ KK++
Sbjct: 601 DPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQ 659
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 38/427 (8%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDI 117
P +P ++ + + Q+D + A +F++AS+QPNF S+S Y ++ KLG+A F + +
Sbjct: 60 PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 119
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLV 176
L +K +F ++ Y + L D + + M E+ KP + N +L +LV
Sbjct: 120 LEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLV 179
Query: 177 THR----------------------------------NYLRPAFDLFKSAHKHGVLPNTK 202
+ +RPA + + +G+ P+
Sbjct: 180 DANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDET 239
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
++ +M+ + G++ A + +M E G + +L+ G C++ ++++A+ +++
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA 299
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+++GF PD +Y TL+N LC+ + A +++ M + G +PDI YN+++ G C+ G
Sbjct: 300 VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEI 359
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A K+L+ M S C PN V+Y ++ LC + D A + +L+ SKG P ++L
Sbjct: 360 EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL 419
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I+G C A + EE+ G P E T+ M++ +C+ ++E E LN + ++E+
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE---EALNLLKEMEL 476
Query: 443 KGDTRIV 449
G R V
Sbjct: 477 NGCARNV 483
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YN ++ + C + A + + +G++PDV ++ L+QGLC S A+DL
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M KG PD +Y L++SLC +KL EA LL M++ GC ++V YNT++ GFC+
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R +A ++ ++M G + V+Y TL+ GLC + A + M MI +G P
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++L+ FC G + +A +++ + +G P T+ ++ +C ++ +L I
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSI 614
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 176/356 (49%), Gaps = 5/356 (1%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTP--SLFTYLIKIYAESNLPDRA 149
RH ST+ ILI L +A + IL+ + Y ++P + FT +++ Y E D A
Sbjct: 200 RHDVSTFNILIKALCKAH--QVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGA 257
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
L+ M+E+ C +N ++ + + A + A G P+ +YN ++
Sbjct: 258 LRIKEQMVEYGCPCTDVTVNVLINGFC-KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN 316
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C G A + + M G+ PD+ +Y L+ GLC+ ++ AV +L+ M+++ P
Sbjct: 317 GLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSP 376
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ ++Y +++SLC++ ++ EA ++ + KG PD+ +N+++ G C A +
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
E+M GC P+ +Y L+ LC + A ++ M G + + + + LI GFC
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++EA + +E+ G + T+ ++ +C + +E +++++++ ++ D
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 164/321 (51%), Gaps = 9/321 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P+ TY +I + N D A + R + P N +++ L N+ + A
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH-KSAM 433
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
DLF+ G P+ +YN+++ + C + + A L +M G +V Y L+ G
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A ++ ++M +G D+++Y TL++ LC+ K++ +A +L+ +M ++G PD
Sbjct: 494 CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN+++ FC+ G A +++ M S+GC P++V+Y TL+ GLC G VA + ++
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613
Query: 367 MISKG--FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ KG +PH + +I+ + EA + E+L E P T+ ++ +C G
Sbjct: 614 IQMKGMVLTPH--AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+GE ++ V++ +G+
Sbjct: 672 G--GPIGEAVDFTVEMIERGN 690
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI+ S+ A+ F M C+P N +++ L + R L A +L K
Sbjct: 416 FNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK-LEEALNLLKEM 474
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G N YN ++ FC N I A +F++M +GV D +Y L+ GLC+ +V
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L++ M+ +G PD +Y +LL C+ +++A ++ M GCNPDIV Y T+
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATL 594
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ GR A ++L + G + +Y ++ L + A + + M+ K
Sbjct: 595 ISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE 654
Query: 373 SPHFSVSHALIKGFCNVGK-VDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
P + +G CN G + EA E+++ G P ++VM+ +C
Sbjct: 655 PPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCT 706
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+EIFD Q R S TY LI L ++K ++ + E + P FTY
Sbjct: 502 AEEIFDEMELQGVSRDS-VTYNTLIDGLCKSKRVEDAAQLMDQMIMEG--LRPDKFTYNS 558
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + ++ +A ++M C P ++ L ++ A L +S
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC-KAGRVQVASRLLRSIQMK 617
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ-VNR 254
G++ +YN +++A A LF +M ++ PD +Y+I+ +GLC +
Sbjct: 618 GMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGE 677
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
AVD +M+ +G +P+ S+ L LC
Sbjct: 678 AVDFTVEMIERGNIPEFSSFVMLAEGLC 705
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
DI+ T+ S P + TY LI ++ A + RS+ P N +++
Sbjct: 574 DIVQTMTSSG--CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQ 631
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGV 232
L RN A LF+ P+ +Y I+ R C G I A +M ERG
Sbjct: 632 ALF-KRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGN 690
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+P+ S+ +L +GLC S + V L++ ++ K
Sbjct: 691 IPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKA 724
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 190/376 (50%), Gaps = 2/376 (0%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V +I Q+DPL A ++F+ + F+H+ TY +I KLG F ++D+L +
Sbjct: 7 PKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66
Query: 122 -KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
K+ + ++ +++ Y A+ F M ++C+P + N I+ +LV +
Sbjct: 67 RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY-G 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y A ++ G+ P+ ++ I M++FC G + A L N M +G + SY
Sbjct: 126 YFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYC 185
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ G +++ A L ++ML +G PD L++ L++ LC+K ++E+ KL ++ +
Sbjct: 186 AVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR 245
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++ +N + G CR+G +A ++LE + S G P+++SY TL+ G C A
Sbjct: 246 GVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA 305
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ Y+ M++ G P+ + +I GFC G + A +L + + G P E T+ ++
Sbjct: 306 ECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLING 365
Query: 421 ICAGEEMEKLGEVLNE 436
+C +M + V E
Sbjct: 366 LCNDGDMNRAMAVFYE 381
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 184/365 (50%), Gaps = 17/365 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ +P+ + N+ IL+ YFS + + +K + P ++T+ I++
Sbjct: 100 ERMDFYDCEPSVQSYNAIMNILV----EYGYFSQAHKVYMRMKD--IGIYPDVYTHTIRM 153
Query: 140 --YAESNLPDRALKTFRSM----LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
+ + P AL+ +M EFN ++ + N A+ LF
Sbjct: 154 KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK-----ENCQIEAYHLFDEML 208
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ P+ ++N ++ C G++ + LF+K+ +RGV P++ ++ I +QGLCRK ++
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A LLE ++++G PD +SY TL+ C+ KL EA L +M G P+ YNT++
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC+ G +A K+L D G +P+ +Y +L+ GLC+ G + A + KGF
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ + L+KG G V +A +++++++ G +P T+ ++V +C + +
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448
Query: 434 LNEIV 438
LN+ +
Sbjct: 449 LNDAI 453
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+LFT+ I I D A + S++ P N ++ H +
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K + GV PN +YN ++ FC G + A + +G +PD +Y L+ G
Sbjct: 307 CYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLING 365
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC +NRA+ + + + KGF + Y TL+ L ++ + +A +L+ M GC+PD
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN VV G C+ G DA +L D + GC+P++ ++ TL+ G C Q D A + +
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+S G +P + L+ G C K+D + +L+ G P+ T+ +++ C
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545
Query: 426 EMEKLGEVLNEI 437
++ + E+ E+
Sbjct: 546 KVSEAMELFKEM 557
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 139/258 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A + + A G +P+ +Y+ ++ C +GD++ A +F + E+G + Y
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GL ++ V +A+ L++DM+ G PD +Y ++N LC+ L +A +L KG
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI +NT++ G+C++ A ++L+ M S+G P++++Y TL+ GLC D
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M+ KG +P+ + LI+ FC KV EA + +E+ G P T ++ +
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576
Query: 422 CAGEEMEKLGEVLNEIVK 439
C+ E++K E+ I K
Sbjct: 577 CSNGELDKAYELFVTIEK 594
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 36/333 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ +I + + N A F ML+ P N+++ +L N ++ + LF
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN-VQESEKLFSKV 242
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ- 251
K GV PN ++NI ++ C G I A L + G+ PDV SY L+ G C+ S+
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 252 ----------VNRAVD------------------------LLEDMLNKGFVPDTLSYTTL 277
VN V+ +L D + KGF+PD +Y++L
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N LC + A + KG I+ YNT+V G ++G + A ++++DM +GC
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P++ +Y +V GLC G A + I+KG P + LI G+C +D+A
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
+L+ +L G P T+ ++ +C +++ +
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 41/349 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI +RA+ F +E K N +++ L + + + A
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL-SKQGLVLQALQ 412
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K +HG P+ +YN+++ C G +S A + N +G +PD+ ++ L+ G C
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++A+++L+ ML+ G PD ++Y TLLN LC+ +KL M KGC P+I+
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD--------V 359
YN ++ FC++ + +A ++ ++M + G P++V+ TL+ GLC G D +
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592
Query: 360 AKKY--------MQLMISKGFSPHFSVSHA---------------------LIKGFCNVG 390
K+Y +MI+ F +VS A +I +C G
Sbjct: 593 EKEYKFSYSTAIFNIMIN-AFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+D A L E + G P T ++ +C + + ++N +V+
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+ L+K ++ L +AL+ + M+E C P N ++ L L A +
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK-MGCLSDANGILND 451
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A G +P+ ++N ++ +C ++ A + + M G+ PDV +Y L+ GLC+ +
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ VD + ML KG P+ ++Y L+ S C+ +K+ EA +L MK +G PDIV T
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 312 VVLGFCREGRAIDA---------------------------C---------KVLEDMPSN 335
++ G C G A C K+ M +
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C P+ +YR ++ C G D+A ++ ISKG P F+ ++ C ++ EA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 396 CGVLEELLKAGEAPHE 411
++ +++ G P E
Sbjct: 692 VVIINLMVQNGIVPEE 707
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y +M+ RK +V AV++ E M P SY ++N L +A+K+ RMK
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD+ + + FC GR A ++L +MP GC N VSY ++ G +
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A M+ +G P + LI C G V E+ + +++K G P+ T+ + +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+C +++ +L IV
Sbjct: 259 QGLCRKGAIDEAARLLESIV 278
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 39/252 (15%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FT+ LI Y + D+A++ +ML P N +L L R L D
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK-LDNVVD 517
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
FK+ + G PN +YNI++ +FC + +S A LF +M RG+ PD+ + L+ GLC
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 248 RKSQVNRAVDLL--------------------------------EDMLNK----GFVPDT 271
++++A +L E + +K PD
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDN 637
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y +++S C+ + A+ L KG P V+ C R +A ++
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697
Query: 332 MPSNGCLPNLVS 343
M NG +P V+
Sbjct: 698 MVQNGIVPEEVN 709
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+IL T+ S + +TP + TY L+ ++ D + TF++MLE C P N ++E
Sbjct: 482 EILDTMLS--HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPN--------------------------------- 200
R + A +LFK G+ P+
Sbjct: 540 SFCKDRK-VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKF 598
Query: 201 ---TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
T +NIM+ AFC ++S+A LF+KM PD +YR+++ C+ ++ A
Sbjct: 599 SYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHT 658
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
L + ++KG VP + +LN LC +L EA ++ M G P+ V+
Sbjct: 659 FLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 192/380 (50%), Gaps = 2/380 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P V +I Q+DPL A ++F+ + F+H+ TY +I KLG F ++D+L
Sbjct: 6 QPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAE 65
Query: 121 L-KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+ K+ + ++ +++ Y A+ F M ++C+P + N I+ +LV +
Sbjct: 66 MRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY- 124
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y A ++ G+ P+ ++ I M++FC G + A L N M +G + SY
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ G +++ A L ++ML +G PD L++ L++ LC+K ++E+ KL ++
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P++ +N + G CR+G +A ++LE + S G P+++SY TL+ G C
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A+ Y+ M++ G P+ + +I GFC G + A +L + + G P E T+ ++
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+C +M + V E ++
Sbjct: 365 GLCNDGDMNRAMAVFYEAME 384
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 184/365 (50%), Gaps = 17/365 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ +P+ + N+ IL+ YFS + + +K + P ++T+ I++
Sbjct: 100 ERMDFYDCEPSVQSYNAIMNILV----EYGYFSQAHKVYMRMKD--IGIYPDVYTHTIRM 153
Query: 140 --YAESNLPDRALKTFRSM----LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
+ + P AL+ +M EFN ++ + N A+ LF
Sbjct: 154 KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK-----ENCQIEAYHLFDEML 208
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ P+ ++N ++ C G++ + LF+K+ +RGV P++ ++ I +QGLCRK ++
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A LLE ++++G PD +SY TL+ C+ KL EA L +M G P+ YNT++
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC+ G +A K+L D G +P+ +Y +L+ GLC+ G + A + KGF
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ + L+KG G V +A +++++++ G +P T+ ++V +C + +
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448
Query: 434 LNEIV 438
LN+ +
Sbjct: 449 LNDAI 453
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+LFT+ I I D A + S++ P N ++ H +
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K + GV PN +YN ++ FC G + A + +G +PD +Y L+ G
Sbjct: 307 CYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLING 365
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC +NRA+ + + + KGF + Y TL+ L ++ + +A +L+ M GC+PD
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN VV G C+ G DA +L D + GC+P++ ++ TL+ G C Q D A + +
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+S G +P + L+ G C K+D + +L+ G P+ T+ +++ C
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545
Query: 426 EMEKLGEVLNEI 437
++ + E+ E+
Sbjct: 546 KVSEAMELFKEM 557
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 139/258 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A + + A G +P+ +Y+ ++ C +GD++ A +F + E+G + Y
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GL ++ V +A+ L++DM+ G PD +Y ++N LC+ L +A +L KG
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI +NT++ G+C++ A ++L+ M S+G P++++Y TL+ GLC D
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M+ KG +P+ + LI+ FC KV EA + +E+ G P T ++ +
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576
Query: 422 CAGEEMEKLGEVLNEIVK 439
C+ E++K E+ I K
Sbjct: 577 CSNGELDKAYELFVTIEK 594
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 36/342 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ +I + + N A F ML+ P N+++ +L N ++ + LF
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN-VQESEKLFSKV 242
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ- 251
K GV PN ++NI ++ C G I A L + G+ PDV SY L+ G C+ S+
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 252 ----------VNRAVD------------------------LLEDMLNKGFVPDTLSYTTL 277
VN V+ +L D + KGF+PD +Y++L
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N LC + A + KG I+ YNT+V G ++G + A ++++DM +GC
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P++ +Y +V GLC G A + I+KG P + LI G+C +D+A
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+L+ +L G P T+ ++ +C +++ + + +++
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 41/349 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI +RA+ F +E K N +++ L + + + A
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL-SKQGLVLQALQ 412
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K +HG P+ +YN+++ C G +S A + N +G +PD+ ++ L+ G C
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++A+++L+ ML+ G PD ++Y TLLN LC+ +KL M KGC P+I+
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD--------V 359
YN ++ FC++ + +A ++ ++M + G P++V+ TL+ GLC G D +
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592
Query: 360 AKKY--------MQLMISKGFSPHFSVSHA---------------------LIKGFCNVG 390
K+Y +MI+ F +VS A +I +C G
Sbjct: 593 EKEYKFSYSTAIFNIMIN-AFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+D A L E + G P T ++ +C + + ++N +V+
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+ L+K ++ L +AL+ + M+E C P N ++ L L A +
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK-MGCLSDANGILND 451
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A G +P+ ++N ++ +C ++ A + + M G+ PDV +Y L+ GLC+ +
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ VD + ML KG P+ ++Y L+ S C+ +K+ EA +L MK +G PDIV T
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 312 VVLGFCREGRAIDA---------------------------C---------KVLEDMPSN 335
++ G C G A C K+ M +
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C P+ +YR ++ C G D+A ++ ISKG P F+ ++ C ++ EA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 396 CGVLEELLKAGEAPHE 411
++ +++ G P E
Sbjct: 692 VVIINLMVQNGIVPEE 707
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 39/252 (15%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FT+ LI Y + D+A++ +ML P N +L L R L D
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK-LDNVVD 517
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
FK+ + G PN +YNI++ +FC + +S A LF +M RG+ PD+ + L+ GLC
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 248 RKSQVNRAVDLL--------------------------------EDMLNK----GFVPDT 271
++++A +L E + +K PD
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDN 637
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y +++S C+ + A+ L KG P V+ C R +A ++
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697
Query: 332 MPSNGCLPNLVS 343
M NG +P V+
Sbjct: 698 MVQNGIVPEEVN 709
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 41/231 (17%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+IL T+ S + +TP + TY L+ ++ D + TF++MLE C P N ++E
Sbjct: 482 EILDTMLS--HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPN--------------------------------- 200
R + A +LFK G+ P+
Sbjct: 540 SFCKDRK-VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKF 598
Query: 201 ---TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
T +NIM+ AFC ++S+A LF+KM PD +YR+++ C+ ++ A
Sbjct: 599 SYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHT 658
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
L + ++KG VP + +LN LC +L EA ++ M G P+ V+
Sbjct: 659 FLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 195/402 (48%), Gaps = 3/402 (0%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFR 92
Y +S E P+ E + ++ P + L + DP A +F + ++ FR
Sbjct: 21 YHTSRPEKPTKKATSHEPTHKFTRKPWEEVPFLTDLKEIE-DPEEALSLF-HQYQEMGFR 78
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H +Y LI KL +++ F +D IL ++ + SLF LI+ Y ++ D+A+
Sbjct: 79 HDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMALIQHYGKAGWVDKAVDV 138
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F + F+C + LN ++ +LV + L A F A + PN+ S+NI+++ F
Sbjct: 139 FHKLTSFDCVRTIQSLNTLINVLVDN-GELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
D A +F++M E V P V +Y L+ LCR + + +A LLEDM+ K P+ +
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAV 257
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ L+ LC + EA KL+ M+ +GC P +V+Y ++ + G+ +A +L +M
Sbjct: 258 TFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEM 317
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P+ V Y LV LC +G A + + M KG P+ + ++ GFC +G
Sbjct: 318 KKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDF 377
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
D VL +L + +P T+V +V + G ++ VL
Sbjct: 378 DSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVL 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G + SY+ ++ + + + + R V + L+Q
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMALIQ 124
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ V++AVD+ + + V S TL+N L +L +A K P
Sbjct: 125 HYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V +N ++ GF + ACKV ++M P++V+Y +L+G LC A +
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLL 244
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI K P+ L+KG C G+ +EA ++ ++ G P + +++ +
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKR 304
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
++++ +L E+ K IK D
Sbjct: 305 GKIDEAKILLGEMKKRRIKPD 325
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 11/310 (3%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI ++N PDRA + F M C P N +L+ L L A
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF-RTGKLERAMA 66
Query: 188 LFKSA---HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
LF+ H V+ S+NI++ C G I A F KM +R P+V +Y +L+
Sbjct: 67 LFQEMLDRRSHDVI----SFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLID 121
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++V++AV+LLE M +G PD ++YT L++ LC++ K+ A+++L M GC P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN+++ G CR R DA ++ DM GC PN+V+Y TL+ GLC G A +
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
MI KG +P + + LI G C +VDE+ +L + G P T+ ++ +C
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301
Query: 425 EEMEKLGEVL 434
+++ +L
Sbjct: 302 NRLDEACRLL 311
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 7/335 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTF 153
TY +LI L +A S ++L ++K+ +P + TY I + ES + A +
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESMKAR--GCSPDVITYTILVDGLCKESKVA-AAWEVL 171
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R ML+ C P N +L L R + A L + G PN +Y ++ C
Sbjct: 172 REMLDAGCVPNLVTYNSLLHGLCRARR-VSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A + M ++G PD+ Y +L+ GLC+ QV+ ++ LL ++ G PD ++
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y++++ LCR +L EA +LL +K +GC PD++ Y+T++ G C+ G+ +A + E M
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+GC ++V+Y TL+ GLC G D A + M+ G P ++LIKG C++ +D
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
EA ++EE+ ++ AP T+ +++ +C E ++
Sbjct: 411 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVD 445
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 174/354 (49%), Gaps = 20/354 (5%)
Query: 93 HSNSTYLILILKLGRA-------KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAES 143
H ++ IL+ L RA ++F +DD +P++ TY LI ++
Sbjct: 77 HDVISFNILVTGLCRAGKIETALEFFRKMDD----------RCSPNVITYSVLIDGLCKA 126
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N +A++ SM C P +++ L + + A+++ + G +PN +
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGL-CKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YN ++ C +S A L M RG P+V +Y L+ GLC+ +V A +L DM+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+KG PD + Y L+N LC+ ++ E+ LL R G PD+V Y++V+ G CR R
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+AC++L + S GC P+++ Y TL+ GLC G D A ++M G LI
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G C G+VDEA +L +++ G P T+ ++ +C +++ E++ E+
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 154/291 (52%), Gaps = 3/291 (1%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M + C+P N +++ L + R A +LF+ P+ +YN ++ G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDR-AQELFEHMKSVECSPSMVTYNTLLDGLFRTG 59
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A LF +M +R DV S+ IL+ GLCR ++ A++ M ++ P+ ++Y+
Sbjct: 60 KLERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYS 117
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L++ LC+ ++ +A +LL MK +GC+PD++ Y +V G C+E + A +VL +M
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC+PNLV+Y +L+ GLC A M+ M +G +P+ LI G C VG+V +A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C +L +++ G P + M++ +C +++++ +L V IK D
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 288
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 192/409 (46%), Gaps = 27/409 (6%)
Query: 61 SPCRVQK-LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD--- 116
+P V K L+ + DP LA + F +A Q FRH+ +Y I++ + RA+ ++ D
Sbjct: 69 APIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVK 128
Query: 117 --ILITLKSEHYPVT----------------PSLFTYLIKIYAESNLPDRALKTFRSMLE 158
I+ + +PV +F L ++ E L + A + F M
Sbjct: 129 EVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRN 188
Query: 159 FNCKPLPKQLNRILELLVTHRN--YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
F P + N +L L N +R F+ A G+ P+ +YN+M+ C GD
Sbjct: 189 FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA---GIAPSVFTYNVMIDYLCKEGD 245
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ + LF +M E G+ PDV +Y L+ G + + L +M + G VPD ++Y
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N C+ +K+ A++ MK G P++V Y+T++ FC+EG A K+L DM G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LPN +Y +L+ C G A K + M+ G + AL+ G C G++ EA
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
V +LK G +P++ + +V E ME ++L ++ + IK D
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 474
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 3/303 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY LI Y + + F M + C P N ++ R A
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR-A 319
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F+ F +G+ PN +Y+ ++ AFC G + A L M G++P+ +Y L+
Sbjct: 320 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDA 379
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + A LL DML G + ++YT LL+ LC+ ++ EA ++ M G +P+
Sbjct: 380 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 439
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y +V G+ + R DA K+L+ M P+L+ Y +++ G C Q + K ++
Sbjct: 440 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 499
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S+G S + +S +I + GK +A +E+ G T+ +++ +C
Sbjct: 500 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAG 559
Query: 426 EME 428
+E
Sbjct: 560 IVE 562
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 38/318 (11%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY LI Y + RA + F M KP + +++ ++ A
Sbjct: 297 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF-CKEGMMQGAI 355
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G+LPN +Y ++ A C G+++ A+ L N M + GV ++ +Y L+ GL
Sbjct: 356 KLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A ++ ML G P+ YT L++ + +++ +A K+L +M PD+
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 475
Query: 307 VHYNTVVLGFC-----------------------------------REGRAIDACKVLED 331
+ Y +++ G C + G++ DA ++
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G +V+Y L+ GLC+ G+ ++A Y M+S G P+ +V +LI G C
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595
Query: 392 VDEACGVLEELLKAGEAP 409
++ A + +E+ G P
Sbjct: 596 IESAKKLFDEMQCRGMTP 613
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 1/315 (0%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
Q + + TY L+ L +A +++ ++ + ++T L+ Y ++ +
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+K + M E N KP I+ + R L + + G+ N +
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRK-LEETKLILEEMKSRGISANPVISTTI 516
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ A+ G S A F +M + GV + +Y +L+ GLC V AVD ML+ G
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGL 576
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ YT+L++ LC + A KL M+ +G PDI + ++ G + G +A
Sbjct: 577 QPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 636
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
++ M +L Y +LV G G A+K+ MI KG P + L++ +
Sbjct: 637 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYY 696
Query: 388 NVGKVDEACGVLEEL 402
G++DEA + E+
Sbjct: 697 KRGQLDEAIELKNEM 711
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 16/293 (5%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + F+ GV +Y +++ C G + +A F +M G+ P+V Y L+
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 588
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + A L ++M +G PD ++T L++ + L+EA L+ RM
Sbjct: 589 GLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ Y ++V GF + G A K +M G LP V L+ +G D A +
Sbjct: 649 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 708
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVG-------KVDEACGVLEELLKAGEAPHEDT---- 413
M +S F A + N+ K D + +L + G +
Sbjct: 709 NEMERMAYSFEFDAQLAYNEQGVNLTLHAYLYLKFD----IQHQLNRFGTSTMGPWSVIG 764
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSR 466
W + Q+ M K+ ++ + T IVE I ++ + IG RSR
Sbjct: 765 WTWTIIQLFIRWIMRKIRRSFKSLIWMRAYFGTSIVEV-IRVDGFHIGVGRSR 816
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 61/344 (17%)
Query: 152 TFRSMLEFNCKP-----LPKQLNRILEL-----LVTHRNYLR---------PAFDLFKSA 192
T+ S+++ NCK K LN +L+ +VT+ L A ++F+S
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G+ PN + Y ++ + + A + +M E + PD+ Y ++ G C + ++
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491
Query: 253 NRAVDLLEDMLNKGFVPD-----------------------------------TLSYTTL 277
+LE+M ++G + ++Y L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ LC + A CRM G P++ Y +++ G C A K+ ++M G
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P++ ++ L+ G G A + M V +L+ GF G++ +A
Sbjct: 612 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
E+++ G P E V IC E K G+ L+E ++++
Sbjct: 672 FFNEMIEKGILPEE------VLCICLLREYYKRGQ-LDEAIELK 708
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 197/381 (51%), Gaps = 16/381 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNS--TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
L +E+ D S + R S + TY +LI L +A S ++L ++K+ +P + T
Sbjct: 171 LFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR--GCSPDVIT 228
Query: 135 YLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
Y I + ES + A + R ML+ C P N +L L R + A L +
Sbjct: 229 YTILVDGLCKESKVA-AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR-VSDALALMRD 286
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G PN +Y ++ C G + A + M ++G PD+ Y +L+ GLC+ Q
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V+ ++ LL ++ G PD ++Y++++ LCR +L EA +LL +K +GC PD++ Y+T
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ G+ +A + E M +GC ++V+Y TL+ GLC G D A + M+ G
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P ++LIKG C++ +DEA ++EE+ ++ AP T+ +++ +C E ++
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVD--- 523
Query: 432 EVLNEIVKVEIKGDTRIVEAG 452
+ +V +E + R V AG
Sbjct: 524 ---SAVVLLE-QAKARCVAAG 540
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 45/355 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI ++N PDRA + F M C P N +L+ L L A
Sbjct: 112 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF-RTGKLERAMA 170
Query: 188 LFKSA---HKHGV----LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
LF+ H + PN +Y++++ C +S A L M RG PDV +Y
Sbjct: 171 LFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 230
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ GLC++S+V A ++L +ML+ G VP+ ++Y +LL+ LCR +++ +A L+ M +
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDM---------------------------- 332
GC P++V Y T++ G C+ GR DAC +L DM
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350
Query: 333 -------PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
S G P++V+Y +++ GLC D A + + + S+G P + LI G
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
C GKVDEA + E + G T+ ++ +C +++ +L +V++
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 465
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 163/328 (49%), Gaps = 10/328 (3%)
Query: 128 VTPSLF--TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++F + LI ++ AL+ FR+M +L L + L A
Sbjct: 40 LVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKR-LDQA 98
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ HG PN +YN ++ C N + A LF M P + +Y L+ G
Sbjct: 99 LAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDG 158
Query: 246 LCRKSQVNRAVDLLEDMLNKG-------FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
L R ++ RA+ L ++ML++ P+ ++Y+ L++ LC+ ++ +A +LL MK
Sbjct: 159 LFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK 218
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+GC+PD++ Y +V G C+E + A +VL +M GC+PNLV+Y +L+ GLC
Sbjct: 219 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS 278
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A M+ M +G +P+ LI G C VG+V +AC +L +++ G P + M++
Sbjct: 279 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 338
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C +++++ +L V IK D
Sbjct: 339 NGLCKADQVDESIALLRRAVSGGIKPDV 366
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 7/247 (2%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +Y ++R FC G+I A F++M + ++P+V IL+ GLC+ + A+
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
M G V DT+ YT LL+ L ++K+L +A +L M+ GC P++V YN+++ G C+
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK-------G 371
A ++ E M S C P++V+Y TL+ GL G + A Q M+ +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP+ LI G C +V +A +LE + G +P T+ ++V +C ++
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 432 EVLNEIV 438
EVL E++
Sbjct: 247 EVLREML 253
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 8/265 (3%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP L Y LI +++ D ++ R + KP + ++ L N L A
Sbjct: 328 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL-CRSNRLDEAC 386
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L G P+ Y+ ++ C G + A+ L+ M G DV +Y L+ GL
Sbjct: 387 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGL 446
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +V+ A LL M+ G P T++Y +L+ LC L EA +L+ M+ C P
Sbjct: 447 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 506
Query: 307 VHYNTVVLGFCREGRAIDACKVLED-----MPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
V YN ++ G CR R A +LE + + G + ++Y +L+ GLC G A
Sbjct: 507 VTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEAL 566
Query: 362 KYMQLMISKGFSPHFSVSHALIKGF 386
Y Q MI G P L++G
Sbjct: 567 DYFQEMIDNGVIPDHITYSILLEGL 591
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY IY SN D A + + C P + +++ L + A
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL-CKAGKVDEA 420
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL++ G + +Y+ ++ C G + A+ L +M G P +Y L++G
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK----- 300
LC + ++ A++L+E+M P ++Y L++ +CR +++ A LL + K +
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
G D + Y++++ G C+ GR +A ++M NG +P+ ++Y L+ GL
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ LI ++ D A M+ P N +++ L N+L A +L +
Sbjct: 439 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL-CDLNHLDEAIELVEEM 497
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-----GVMPDVESYRILMQGLC 247
+ P+ +YNI++ C + A L + R G D +Y L+ GLC
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ +V A+D ++M++ G +PD ++Y+ LL L + K L E L+
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 604
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD+ Y ++ GFCR G A + ++M S +PN+ L+ GLC A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M G + AL+ G ++D+A +L E+ G P+ T+ ++ +
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 422 CAGEEMEKLGEVLNEIVKVE 441
C E ++ E+ + VE
Sbjct: 125 CKNNEPDRAQELFEHMKSVE 144
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 215/471 (45%), Gaps = 56/471 (11%)
Query: 11 KIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESS--ISNSKSP---------- 58
+ +++ A+ PK+ S F S+ P SPE E S +S+ ++P
Sbjct: 4 RTFSSLVRALHQTPKSQS--FRIFSTLLHDPPSPELVNEISRVLSDHRNPKDDLEHTLAA 61
Query: 59 ----IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
+ S Q L ++ A F +A R P+F HS +Y IL+ LG +K F+L+
Sbjct: 62 YSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFALL 121
Query: 115 DDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
D LI + +Y +T +F + + Y+ +NLP A + F M+EF KP L+++L
Sbjct: 122 WDFLIEAREYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLH 181
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR------------------------ 209
L R ++ A + F A G++P+ K+Y+I++R
Sbjct: 182 SLCD-RKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCV 240
Query: 210 -----------AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
A C +GD+ AY +F +M G+ PD S+ I + C S V+ A +
Sbjct: 241 VDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQV 300
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ M VP+ ++ ++ +LC+ +K+ +AY LL M KG NPD YN+++ C
Sbjct: 301 LDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCD 360
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
A K+L M CLP+ +Y ++ L G FD + + M + F P +
Sbjct: 361 HCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVAT 420
Query: 379 SHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+I G GK++EAC E ++ G P+ T M+ ++ +M+
Sbjct: 421 YTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%)
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+K + I+ RA+ S A FN+M E G+ P V+ L+ LC + VN A + +
Sbjct: 138 SKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFD 197
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
G VP +Y+ L+ R + A K+ M C D++ YN ++ C+ G
Sbjct: 198 KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSG 257
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A K+ ++M + G P+ S+ + CD A + + M P+ +
Sbjct: 258 DVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFN 317
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+IK C KVD+A +L+E+++ G P T+ I+ C E+ + ++L+ +
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ I+ + R + + A M+ G P LL+SLC +K + A + + K
Sbjct: 141 FWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAK 200
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P Y+ +V G+ R A A KV ++M N C+ +L++Y L+ LC G D
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVD 260
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K Q M + G P I +C+ V A VL+ + + P+ T+ I+
Sbjct: 261 GAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHII 320
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C E+++ +L+E+++ DT
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDT 348
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 201/385 (52%), Gaps = 12/385 (3%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP RV +I+ Q + LA +IFD+A + NF H+ TYL +I KL +A+ F ++ ++
Sbjct: 100 SPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLIS 159
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
L +LF +I+ Y + P A++TF + F +P + N +L LV ++
Sbjct: 160 QLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNK 219
Query: 180 NYLRPAFDL----FKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
FDL FK+ K G++PN + NI+++A C DI A + +M G +P
Sbjct: 220 R-----FDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V +Y ++ G K + A + ++L++G+VPD +YT L++ C+K + +A K++
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVM 334
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ P+ V Y ++ +C+E ++ + +L+DM +P+ ++ LC++
Sbjct: 335 DEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEE 394
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G +VA + + ++ K +P +++ LI C GKV EA + +E K G P T+
Sbjct: 395 GKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEK-GSIPSTLTY 453
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVK 439
++ +C G E+ + + + +V+
Sbjct: 454 NALIAGMCEGGELPEAARLWDNMVE 478
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P+ +T L+ Y + A+K M E +P I+E + +L
Sbjct: 311 PTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS-GEVLNLL 369
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ +P++ ++ C G + +A L+ K+ ++ PD L+ LC++
Sbjct: 370 DDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKE 429
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+V A L D KG +P TL+Y L+ +C +L EA +L M KGC P+ Y
Sbjct: 430 GKVWEARKLF-DEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTY 488
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
N ++ GFC+ G A + +V+E+M NGCLPN +Y
Sbjct: 489 NMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 150/354 (42%), Gaps = 22/354 (6%)
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTY--------LIKIYAESNLPDRALKTFRSMLEFNC 161
+ + +D LKS Y VTP + + ++ + + D AL+ F +F+
Sbjct: 72 HLAAVDSKSTLLKS--YTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFH- 128
Query: 162 KPLPKQLNRILELL--VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ L ++ ++ P L HK + + ++R + F G +
Sbjct: 129 RNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKL 188
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-----GFVPDTLSY 274
A F ++ G+ P V S+ L+ L + N+ DL+ M G VP+ +
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQ----NKRFDLVHLMFKNCRKKFGIVPNVFTC 244
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+ +LC+K + A ++L M G P++V Y T++ G+ +G + A +V ++
Sbjct: 245 NILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD 304
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G +P+ +Y L+ G C +G F A K M M P+ +I+ +C K E
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE 364
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+L+++L+ P ++ +C ++E E+ +++K D I
Sbjct: 365 VLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAI 418
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 14/369 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ N + +Y ILI G AK L D + K H VTPS Y LI +N
Sbjct: 316 ERNVSPDSWSYGILID--GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A + F M C P P N +++ R L A DL K + G +P+ +YN
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDA-SCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD-------- 257
+M C + + A LFN+M G P+ S+ ++ GLC++S++++A
Sbjct: 433 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAF 492
Query: 258 -LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL+ M + G VPD ++Y+TL++ LC ++ +A LL M + C P +V NT++ G
Sbjct: 493 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 552
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ GR +A +VL+ M S+G P++V+Y TLV G C G + A++ + M+++G +P+
Sbjct: 553 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
AL+ G C ++ EACGV ++ +G AP+ T+ ++ C+ +++ ++ E
Sbjct: 613 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 672
Query: 437 IVKVEIKGD 445
+V I D
Sbjct: 673 MVCAGISPD 681
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 168/352 (47%), Gaps = 10/352 (2%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S Y LI L A F ++ + P +P + +I + + + A
Sbjct: 357 STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 416
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ M+E P N +++ L + + A LF + G PN +S+N ++ C
Sbjct: 417 KKMIEDGHVPDVVTYNTVMDGLCKS-SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 475
Query: 214 N---------GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
G + A+ L +M + G +PDV +Y L+ GLC ++V+ A LLEDM+
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+ P ++ TL++ LC+ +++EA ++L M G +PD+V YNT+V G CR G+
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A ++L DM + G PN+V+Y LV GLC A M S G +P+ ALI
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
GFC+ G+VD + E++ AG +P + + ++C + E+L E
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 20/371 (5%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R P S + L+ ++ GR ID+ L + L++ +
Sbjct: 175 RIPLAAGSLDSVLVGLMDSGR------IDEALQVYRENRREPCLVTLNVLLEGFCSRGQV 228
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELL-----VTHRNYLRPAFDLFKSAHKHGVLPNT 201
D+A + R+M + C P +L+ L V L +L S+ P+
Sbjct: 229 DKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSL 288
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ YNI++ C N I A +F KM ER V PD SY IL+ GL + ++N A +L +
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
+L+ G P T++YT+L++ LC +A +L M +GC P V YN ++ C+ G
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+AC +++ M +G +P++V+Y T++ GLC + A M G +P+ +
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468
Query: 382 LIKGFCNVGKVDEAC--GVLEE---LLK----AGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+I G C K+D+AC G L+E LLK G P T+ ++ +C+ ++
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528
Query: 433 VLNEIVKVEIK 443
+L ++VK + K
Sbjct: 529 LLEDMVKRQCK 539
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 140/357 (39%), Gaps = 82/357 (22%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--------VTH 178
P + TY ++ +S+ + AL F M C P + N I+ L
Sbjct: 425 VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 484
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSY---------------------------------- 204
R L AF L K G +P+ +Y
Sbjct: 485 RGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 544
Query: 205 -NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
N ++ C G I A + + M G PDV +Y L+ G CR Q RA +LL DM+
Sbjct: 545 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 604
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+G P+ ++YT L++ LC+ +L EA + +MK GC P++ Y ++LGFC G+
Sbjct: 605 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 664
Query: 324 DACKVLEDMPSNGCLPNLVSYRTL------------------------------------ 347
K+ +M G P+ V Y TL
Sbjct: 665 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRF 724
Query: 348 -VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
V GL + G ++A +++ M+ G P +L+ G C G+ EA VLEE++
Sbjct: 725 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 781
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 149/326 (45%), Gaps = 15/326 (4%)
Query: 124 EHYPVT-PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
E PV S + ++ ++ D AL+ R+M E K +P + +LV +
Sbjct: 138 EIMPVANSSAYNIVVVALCKAARVDDALELARTMSE---KRIPLAAGSLDSVLVGLMDSG 194
Query: 183 R--PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
R A +++ + P + N+++ FC G + A L M + PD SY
Sbjct: 195 RIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYC 251
Query: 241 ILMQGLCRKSQVNRAVDLLED------MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
++ GLC+ +V AV L D + P Y ++ LC+ ++ EA ++
Sbjct: 252 TVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMF 311
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+M + +PD Y ++ G + G+ DA + + + +G P+ V+Y +L+ GLC
Sbjct: 312 EKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMA 371
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
FD A++ M +G P + +I C G ++EAC +++++++ G P T+
Sbjct: 372 NSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY 431
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKV 440
++ +C +E+ + NE+ ++
Sbjct: 432 NTVMDGLCKSSRVEEALLLFNEMERL 457
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 11/244 (4%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L + H P YN+++ + + + M +RG PD ++ ++ G
Sbjct: 33 FSLMEECHS----PYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCG 88
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +++ A ++++M ++ P + + L + LC + + A++LL M V +
Sbjct: 89 LCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSA- 147
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN VV+ C+ R DA ++ M S +++ GL D G D A +Q
Sbjct: 148 ---YNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEA---LQ 201
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ P + L++GFC+ G+VD+A +L + AP E ++ ++ +C
Sbjct: 202 VYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAG 261
Query: 426 EMEK 429
+E+
Sbjct: 262 RVEE 265
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
MF++G+ P + ++QG C + AV + ++ + P Y L++SL ++++
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQE 59
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
K++ M +GC PD + T++ G C+ G+ +A V+++M S P +
Sbjct: 60 TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
L LC +G + A + +++M S + V AL C +VD+A
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVAL----CKAARVDDA 164
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN---PDIVHYNTVVLGFCR 318
M +G P L +T+++ C + EA K+ M+ C+ PD+ YN ++ +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE--CHSPYPDV--YNVLIDSLSK 56
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
K+++ M GC P+ ++ T++ GLC G D A+ M M S+ P+F+
Sbjct: 57 RQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFAT 116
Query: 379 SHALIKGFCNVGKVDEACGVLE 400
S L C G ++ A +LE
Sbjct: 117 SSFLAHELCLRGSMERAFQLLE 138
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 212/432 (49%), Gaps = 41/432 (9%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
S+ NS I +P ++ KL+ D + E+F + Q +RHS Y +LI KLG
Sbjct: 62 SLRNSFHKI-TPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGE 120
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE----FNCKPLPK 166
F ID +L+ +K E SLF +++ Y ++ P +T R MLE ++C+P K
Sbjct: 121 FKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPG---QTTRLMLEMRNVYSCEPTFK 177
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +LE+LV+ N + A ++F + P ++ ++M+A C ++ A ++
Sbjct: 178 SYNVVLEILVSG-NCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRD 236
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + G +P+ Y+ L+ L + ++VN A+ LLE+M G VPD ++ ++ LC+ +
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 296
Query: 287 LREAYKLLCRMKVKGCNPDIVHY-------------------------------NTVVLG 315
+ EA K++ RM ++G PD + Y NT++ G
Sbjct: 297 INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHG 356
Query: 316 FCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
F GR DA VL DM S G +P++ +Y +L+ G +G+ +A + ++ M +KG P
Sbjct: 357 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKP 416
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ L+ GFC +GK+DEA +L E+ G P+ + ++ C + + E+
Sbjct: 417 NVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 476
Query: 435 NEIVKVEIKGDT 446
E+ + K D
Sbjct: 477 REMPRKGCKPDV 488
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 3/301 (0%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y + P + TY LI Y + L AL+ R M CKP +++ +
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGF-CKLGKID 435
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A++L G+ PNT +N ++ AFC I A +F +M +G PDV ++ L+
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC ++ A+ LL DM+++G V +T++Y TL+N+ R+ +++EA KL+ M +G
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSL 555
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D + YN+++ G CR G A + E M +G +P+ +S L+ GLC GM + A ++
Sbjct: 556 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEF 615
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ +G +P ++LI G C G++++ + +L G P T+ ++ +C
Sbjct: 616 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675
Query: 424 G 424
G
Sbjct: 676 G 676
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 145/285 (50%), Gaps = 3/285 (1%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
KP N ++ VTH L +G++P+ +YN ++ + G + +A
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ M +G P+V SY IL+ G C+ +++ A +LL +M G P+T+ + L+++
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ ++ EA ++ M KGC PD+ +N+++ G C A +L DM S G + N
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y TL+ +G A+K + M+ +G ++LIKG C G+VD+A + E+
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+L+ G P + +++ +C +E+ E E+V ++G T
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMV---LRGST 625
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + + + A++ FR M CKP N ++ L + ++ A L +
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL-CEVDEIKHALWLLRDM 514
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
GV+ NT +YN ++ AF G+I A L N+M +G + D +Y L++GLCR +V
Sbjct: 515 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEV 574
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A L E ML G VP ++S L+N LCR + EA + M ++G PDIV +N++
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR GR D + + + G P+ V+Y TL+ LC G
Sbjct: 635 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF---------------- 678
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
V +AC +L+E ++ G P++ TW +++ + E +++
Sbjct: 679 -------------------VYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 123/244 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ + G PN SY I++ FC G I AY L N+M G+ P+ + L+
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLIS 461
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C++ ++ AV++ +M KG PD ++ +L++ LC +++ A LL M +G
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V YNT++ F R G +A K++ +M G L + ++Y +L+ GLC G D A+
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G P + LI G C G V+EA +E++ G P T+ ++ +C
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641
Query: 425 EEME 428
+E
Sbjct: 642 GRIE 645
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 181/381 (47%), Gaps = 39/381 (10%)
Query: 55 SKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
S +P+ + + LI Q A + F +AS PNF H+ STY LI KL + F +
Sbjct: 87 STTPVPTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETV 146
Query: 115 DDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
++L + S P S+F +++ + + + +K + +F P K N IL+
Sbjct: 147 KEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILD 206
Query: 174 LLVTH----------------------------------RNYLRPAFDLFKSAHKHGVLP 199
+LV N + AF L + G P
Sbjct: 207 VLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTP 266
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
NT YN M+ A C NG + A +L N+M E P ++ +L+ C++ + +A+ LL
Sbjct: 267 NTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLL 322
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E + GFVPD ++ T ++ LC+ ++ E ++L R++ G D+V YNT++ GFC
Sbjct: 323 EKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCML 382
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+A +VL+DM GCLPN+ +Y L G CD GM D A M + G + +F
Sbjct: 383 GKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTY 442
Query: 380 HALIKGFCNVGKVDEACGVLE 400
LI+G C+ G++++ +LE
Sbjct: 443 DTLIRGLCSGGRMEDGFKILE 463
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 158/374 (42%), Gaps = 46/374 (12%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ +L +E + F LI Y + +AL P
Sbjct: 283 KVGRAR----------SLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVP 332
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+++ +L + ++ + G + + +YN +++ FC G + + +
Sbjct: 333 DVVTATKVVGIL-CKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 391
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M +G +P+V++Y IL G C ++ A+DL DM G + ++Y TL+ LC
Sbjct: 392 LKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 451
Query: 284 KKKLREAYKLLCRMKVK--GCNPDIVHYNTVV---------------------------- 313
++ + +K+L M+ G I YN+++
Sbjct: 452 GGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVD 511
Query: 314 -----LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
LGFC EG DA +V + M G +P+++ Y L+ G C G A + + M+
Sbjct: 512 RSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV 571
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G+ P +ALI FC GKV A ++E+++ G P ++ +V +C + +
Sbjct: 572 DHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQ 631
Query: 429 KLGEVLNEIVKVEI 442
K + ++V+ +I
Sbjct: 632 KAVRLFLQMVEKDI 645
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER--GVMPDVESY 239
L A DLF G+ N +Y+ ++R C G + + + M E G + Y
Sbjct: 420 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 479
Query: 240 RILMQGLCRKSQVNRAVDLL---------------------------------EDMLNKG 266
++ GL +K+Q A++ L + M+ +G
Sbjct: 480 NSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEG 539
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VP L Y L++ C+ +REA++L+ M G P +N ++ FC +G+ A
Sbjct: 540 GVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSAL 599
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
K++EDM GCLP++ SY +V LC++G F A + M+ K P +S ++++
Sbjct: 600 KLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K G LPN +YNI+ +C +G + A LFN M G+ + +Y L++GLC
Sbjct: 391 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC 450
Query: 248 RKSQVNRAVDLLEDML-NKGFVPDTLS-YTTLLNSLCRKKKLREAYKLLCRM-------- 297
++ +LE M ++G +S Y +++ L +K + EA + L +M
Sbjct: 451 SGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAV 510
Query: 298 ----KVKG-CN--------------------PDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ G CN P ++ Y ++ GFC++G +A +++ +M
Sbjct: 511 DRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM 570
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G P ++ L+ C QG A K M+ M+ +G P ++ CN G
Sbjct: 571 VDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDF 630
Query: 393 DEACGVLEELLKAGEAPHEDTW 414
+A + ++++ P TW
Sbjct: 631 QKAVRLFLQMVEKDILPDYSTW 652
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 153 FRSMLEFNCKP---LPKQLNRILELL-VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
F LEF K P+ ++R L +L + + A ++ K G +P+ Y ++
Sbjct: 492 FEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLI 551
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC +G++ A+ L N+M + G P ++ L+ C + +V A+ L+EDM+ +G +
Sbjct: 552 HGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCL 611
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
PD SY+ ++++LC K ++A +L +M K PD +N+++L +E
Sbjct: 612 PDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 662
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+N A + K + P ++ + FC G I A ++++M + G +P V
Sbjct: 489 KNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLV 546
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G C+ V A +L+ +M++ G+ P ++ L+++ C + K+ A KL+ M
Sbjct: 547 YVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMV 606
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+GC PD+ Y+ +V C +G A ++ M LP+ ++ +++ L + ++
Sbjct: 607 GRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWL 666
Query: 359 VAKKYMQLMISKG 371
L + G
Sbjct: 667 EGDNLFHLQLQDG 679
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 201/385 (52%), Gaps = 12/385 (3%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP RV +I+ Q + LA +IFD+A + NF H+ TYL +I KL +A+ F ++ ++
Sbjct: 100 SPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLIS 159
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
L +LF +I+ Y + P A++TF + F +P + N +L LV ++
Sbjct: 160 QLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNK 219
Query: 180 NYLRPAFDL----FKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
FDL FK+ K G++PN + NI+++A C DI A + +M G +P
Sbjct: 220 R-----FDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V +Y ++ G K + A + ++L++G+VPD +YT L++ C+K + +A K++
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVM 334
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ P+ V Y ++ +C+E ++ + +L+DM +P+ ++ LC++
Sbjct: 335 DEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEE 394
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G +VA + + ++ K +P +++ LI C GKV EA + +E K G P T+
Sbjct: 395 GKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEK-GSIPSTLTY 453
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVK 439
++ +C G E+ + + + +V+
Sbjct: 454 NALIAGMCEGGELPEAARLWDNMVE 478
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P+ +T L+ Y + A+K M E +P I+E + +L
Sbjct: 311 PTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS-GEVLNLL 369
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ +P++ ++ C G + +A L+ K+ ++ PD L+ LC++
Sbjct: 370 DDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKE 429
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+V A L D KG +P TL+Y L+ +C +L EA +L M KGC P+ Y
Sbjct: 430 GKVWEARKLF-DEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTY 488
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
N ++ GFC+ G A + +V+E+M NGCLPN +Y
Sbjct: 489 NMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 150/354 (42%), Gaps = 22/354 (6%)
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTY--------LIKIYAESNLPDRALKTFRSMLEFNC 161
+ + +D LKS Y VTP + + ++ + + D AL+ F +F+
Sbjct: 72 HLAAVDSKSTLLKS--YTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFH- 128
Query: 162 KPLPKQLNRILELL--VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ L ++ ++ P L HK + + ++R + F G +
Sbjct: 129 RNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKL 188
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-----GFVPDTLSY 274
A F ++ G+ P V S+ L+ L + N+ DL+ M G VP+ +
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQ----NKRFDLVHLMFKNCRKKFGIVPNVFTC 244
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+ +LC+K + A ++L M G P++V Y T++ G+ +G + A +V ++
Sbjct: 245 NILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD 304
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G +P+ +Y L+ G C +G F A K M M P+ +I+ +C K E
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE 364
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+L+++L+ P ++ +C ++E E+ +++K D I
Sbjct: 365 VLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAI 418
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 191/409 (46%), Gaps = 27/409 (6%)
Query: 61 SPCRVQK-LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD--- 116
+P V K L+ + DP LA + F +A Q FRH+ +Y I++ + RA+ ++ D
Sbjct: 128 APIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVK 187
Query: 117 --ILITLKSEHYPVT----------------PSLFTYLIKIYAESNLPDRALKTFRSMLE 158
I+ + +PV +F L ++ E L + A + F M
Sbjct: 188 EVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRN 247
Query: 159 FNCKPLPKQLNRILELLVTHRN--YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
F P + N +L L N +R F+ A G+ P+ +YN+M+ C GD
Sbjct: 248 FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA---GIAPSVFTYNVMIDYLCKEGD 304
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ + LF +M E G+ PDV +Y L+ G + + L +M + G VPD ++Y
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N C+ +K+ A++ MK G P++V Y+T++ FC+EG A K+ DM G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LPN +Y +L+ C G A K + M+ G + AL+ G C G++ EA
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
V +LK G +P++ + +V E ME ++L ++ + IK D
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 3/303 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY LI Y + + F M + C P N ++ R A
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR-A 378
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F+ F +G+ PN +Y+ ++ AFC G + A LF M G++P+ +Y L+
Sbjct: 379 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDA 438
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + A LL DML G + ++YT LL+ LC+ ++ EA ++ M G +P+
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y +V G+ + R DA K+L+ M P+L+ Y +++ G C Q + K ++
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S+G S + +S +I + GK +A +E+ G T+ +++ +C
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAG 618
Query: 426 EME 428
+E
Sbjct: 619 IVE 621
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 38/318 (11%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY LI Y + RA + F M KP + +++ ++ A
Sbjct: 356 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF-CKEGMMQGAI 414
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF + G+LPN +Y ++ A C G+++ A+ L N M + GV ++ +Y L+ GL
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A ++ ML G P+ YT L++ + +++ +A K+L +M PD+
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534
Query: 307 VHYNTVVLGFC-----------------------------------REGRAIDACKVLED 331
+ Y +++ G C + G++ DA ++
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G +V+Y L+ GLC G+ ++A Y M+S G P+ +V +LI G C
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 392 VDEACGVLEELLKAGEAP 409
++ A + +E+ G P
Sbjct: 655 IESAKKLFDEMQCRGMTP 672
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 1/310 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A +++ ++ + ++T L+ Y ++ + A+K + M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E N KP I+ + R L + + G+ N ++ A+ G
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRK-LEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
S A F +M + GV + +Y +L+ GLC+ V AVD ML+ G P+ YT+
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTS 644
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ LC+ + A KL M+ +G PDI + ++ G + G +A ++ M
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+L Y +LV G G A+K+ MI KG P + L++ + G++DEA
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764
Query: 397 GVLEELLKAG 406
+ E+ + G
Sbjct: 765 ELKNEMERMG 774
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 139/344 (40%), Gaps = 61/344 (17%)
Query: 152 TFRSMLEFNCKP-----LPKQLNRILEL-----LVTHRNYLR---------PAFDLFKSA 192
T+ S+++ NCK K LN +L+ +VT+ L A ++F+S
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G+ PN + Y ++ + + A + +M E + PD+ Y ++ G C + ++
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550
Query: 253 NRAVDLLEDMLNKGFVPD-----------------------------------TLSYTTL 277
+LE+M ++G + ++Y L
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ LC+ + A CRM G P++ Y +++ G C+ A K+ ++M G
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P++ ++ L+ G G A + M V +L+ GF G++ +A
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 730
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
E+++ G P E V IC E K G+ L+E ++++
Sbjct: 731 FFNEMIEKGILPEE------VLCICLLREYYKRGQ-LDEAIELK 767
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI L +A L D + S +++T LI ++N + A K F M
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Query: 157 LEFNCKPLPKQLNRILELL---VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
C+ + + L+ + H N L+ A L + + + Y ++ F
Sbjct: 666 ---QCRGMTPDITAFTALIDGNLKHGN-LQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 721
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
G++ A FN+M E+G++P+ L++ ++ Q++ A++L +M G + ++
Sbjct: 722 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITES 779
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 198/379 (52%), Gaps = 7/379 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D EIF+ Q + H+ Y + I KLG F LID +L+
Sbjct: 78 TPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQ 137
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E S+F ++K Y ++ P +A++ M + C+P K + +LE+LVT
Sbjct: 138 MKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTG- 196
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A ++F GV P ++ I+M+A C ++ A +L M + G +P+ Y
Sbjct: 197 NCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVY 256
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L+ L +K+QV+ A+ LLE+M G +PD ++ +++ LC+ K+ +A KL+ RM +
Sbjct: 257 QTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLL 316
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD + Y ++ G CR G+ +A K+L +P PN TL+ G G
Sbjct: 317 RGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKE 372
Query: 360 AKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A+ ++ + MI+ GF P + L+ G C G + A ++ E+ + G P+ T+ ++V
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILV 432
Query: 419 PQICAGEEMEKLGEVLNEI 437
+C +E+ G VL+E+
Sbjct: 433 NGLCKAGLLEEAGLVLHEM 451
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 130/244 (53%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +YNI+M C G +S A L N+M RG P+V +Y IL+ GLC+ + A
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M +G +++ Y L+ +LCRK+K+ A LL M KGC PD+ YN+++ G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ R +A ++ +M +G + N V+Y TL+ L +G F A + M+ +G +
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LIK FC VG +++ + E+++ G + +++ +C +++ E L
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624
Query: 436 EIVK 439
+ +
Sbjct: 625 DAIN 628
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ N+ YN ++ A C + +A L ++M +G PD+ +Y L+ GLC+ +++ A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L +ML G V + ++Y TL+++L R+ ++A L+ M +GC D + YN ++
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G ++ E M +G + +S ++ GLC G D A ++++ I++GF P
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++++ G C VG++ EA + + L G P T+ + C
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC 681
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFTY IY + D A + F +ML N ++ L+ R + A
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL-RRGAFQKALT 551
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G + +YN +++AFC G+I L+ +M G+ D S I++ GLC
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +V+ A + L D +N+GFVPD ++Y ++LN LC+ +++EA L R++V+G PD
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
YNT + C+EG DAC NG +P+ +++ LV L Q
Sbjct: 672 TYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQ 718
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L G P+ +YN ++ C I A+ LF+ M G + + +Y L+
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L R+ +A+ L+ DML +G D ++Y L+ + C+ + + +L +M + G
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + N ++ G C+ G+ +A + L D + G +P++V+Y +++ GLC G A
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ +G P + I C G V++AC ++ G P TW ++V +
Sbjct: 659 DRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQ 718
Query: 425 EEMEKLGEVLNEI 437
E VL+E+
Sbjct: 719 SNQENNFFVLDEL 731
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+AL ML C N +++ N + +L++ G+ +T S NIM
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN-IEKGLELYEQMIMDGLGADTISCNIM 606
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C G + A+ RG +PD+ +Y ++ GLC+ ++ A++L + + +G
Sbjct: 607 INGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +Y T ++ C++ + +A R G P + +N +V ++ +
Sbjct: 667 RPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFF 726
Query: 328 VLEDM 332
VL+++
Sbjct: 727 VLDEL 731
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 207/448 (46%), Gaps = 72/448 (16%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P R+ +I Q + LA +IF YA + P F H+ TY +I +L RA+ F ++ +L+
Sbjct: 52 PNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLE 111
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ + LF +I+ Y ++ P ALKTF + F + + LN +L LV N
Sbjct: 112 LQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALV-QNN 170
Query: 181 YLRPAFDLFK-SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
LFK S K GV+PN + NI+++A C D+ A +F++M G++P+V +Y
Sbjct: 171 RFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTY 230
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ G + + A + ++ + G++PD +YT L++ ++ + +A K++ M+
Sbjct: 231 TTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEE 290
Query: 300 KGCNPDIVHYNTVVLGFCRE-----------------------------------GRAID 324
G P+ + Y ++LG+C+E GR +
Sbjct: 291 NGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKE 350
Query: 325 ACKVLEDMPSNGCLPN----------------------------------LVSYRTLVGG 350
ACK+ E + C P+ L++Y TL+ G
Sbjct: 351 ACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAG 410
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C+ G A + M+ KG P+ + LIKGF VGK E V+EE+L G +
Sbjct: 411 MCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLN 470
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIV 438
E T++++V + + E+L +L+ I+
Sbjct: 471 ESTYLILVEGLLKLGKREELLNILSMII 498
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 140/367 (38%), Gaps = 93/367 (25%)
Query: 117 ILITLKSEHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L + V P++FT LIK + N + A K F M P IL
Sbjct: 177 LLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGG 236
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V+ R + A +F HG LP+ +Y I+M + G + A + ++M E GV P
Sbjct: 237 YVS-RGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEP 295
Query: 235 DVESYRILMQG-----------------------------------LCRKSQVNRAVDLL 259
+ +Y +++ G LC + +V A +
Sbjct: 296 NDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMW 355
Query: 260 EDMLNKGFVPDT----------------------------------LSYTTLLNSLCRKK 285
E +L K PD L+Y TL+ +C
Sbjct: 356 EKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMG 415
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+L EA +L M KGC P+ YN ++ GF + G+A + KV+E+M GCL N +Y
Sbjct: 416 ELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKG---------FSPHFSVSHALIKGFCNVGKVDEAC 396
LV GL G + + ++IS G F PHF V V+E
Sbjct: 476 ILVEGLLKLGKREELLNILSMIISSGAVDFKAWNLFVPHF------------VSNVNEQA 523
Query: 397 GVLEELL 403
+LE++L
Sbjct: 524 NILEKIL 530
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 1/273 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
P L G+ + + ++R++ +A F ++ GV V S
Sbjct: 102 FEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNT 161
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ L + ++ + L + +K G VP+ + L+ +LC+K + A K+ M
Sbjct: 162 LLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSM 221
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++V Y T++ G+ G I A +V ++ +G LP+ +Y L+ G QG F A
Sbjct: 222 GIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDA 281
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K M M G P+ +I G+C K EA +L ++L+ P+ ++
Sbjct: 282 VKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDV 341
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+C +++ ++ +++K D I I
Sbjct: 342 LCGEGRVKEACKMWEKLLKKNCTPDNAITSTLI 374
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 198/379 (52%), Gaps = 7/379 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D EIF+ Q + H+ Y + I KLG F LID +L+
Sbjct: 78 TPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQ 137
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E S+F ++K Y ++ P +A++ M + C+P K + +LE+LVT
Sbjct: 138 MKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTG- 196
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A ++F GV P ++ I+M+A C ++ A +L M + G +P+ Y
Sbjct: 197 NCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVY 256
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L+ L +K+QV+ A+ LLE+M G +PD ++ +++ LC+ K+ +A KL+ RM +
Sbjct: 257 QTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLL 316
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD + Y ++ G CR G+ +A K+L +P PN TL+ G G
Sbjct: 317 RGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKE 372
Query: 360 AKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A+ ++ + MI+ GF P + L+ G C G + A ++ E+ + G P+ T+ ++V
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILV 432
Query: 419 PQICAGEEMEKLGEVLNEI 437
+C +E+ G VL+E+
Sbjct: 433 NGLCKAGLLEEAGLVLHEM 451
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 130/244 (53%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +YNI+M C G +S A L N+M RG P+V +Y IL+ GLC+ + A
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M +G +++ Y L+ +LCRK+K+ A LL M KGC PD+ YN+++ G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ R +A ++ +M +G + N V+Y TL+ L +G F A + M+ +G +
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LIK FC VG +++ + E+++ G + +++ +C +++ E L
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624
Query: 436 EIVK 439
+ +
Sbjct: 625 DAIN 628
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ N+ YN ++ A C + +A L ++M +G PD+ +Y L+ GLC+ +++ A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L +ML G V + ++Y TL+++L R+ ++A L+ M +GC D + YN ++
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G ++ E M +G + +S ++ GLC G D A ++++ I++GF P
Sbjct: 575 FCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPD 634
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++++ G C VG++ EA + + L G P T+ + C
Sbjct: 635 IVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC 681
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFTY IY + D A + F +ML N ++ L+ R + A
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL-RRGAFQKALT 551
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G + +YN +++AFC G+I L+ +M G+ D S I++ GLC
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +V+ A + L D +N+GFVPD ++Y ++LN LC+ +++EA L R++V+G PD
Sbjct: 612 KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF 671
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
YNT + C+EG DAC NG +P+ +++ LV L Q
Sbjct: 672 TYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQ 718
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L G P+ +YN ++ C I A+ LF+ M G + + +Y L+
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L R+ +A+ L+ DML +G D ++Y L+ + C+ + + +L +M + G
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + N ++ G C+ G+ +A + L D + G +P++V+Y +++ GLC G A
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ +G P + I C G V++AC ++ G P TW ++V +
Sbjct: 659 DRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQ 718
Query: 425 EEMEKLGEVLNEI 437
E VL+E+
Sbjct: 719 SNQENNFFVLDEL 731
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+AL ML C N +++ N + +L++ G+ +T S NIM
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN-IEKGLELYEQMIMDGLGADTISCNIM 606
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C G + A+ RG +PD+ +Y ++ GLC+ ++ A++L + + +G
Sbjct: 607 INGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +Y T ++ C++ + +A R G P + +N +V ++ +
Sbjct: 667 RPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFF 726
Query: 328 VLEDM 332
VL+++
Sbjct: 727 VLDEL 731
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 203/400 (50%), Gaps = 19/400 (4%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
SS Q + + N P SP ++ +IF + +F+ +ST+ L
Sbjct: 33 SSRTLNQNNDLENGSEPESSP--------------ISDKIFSSPPKMGSFKVGDSTFYSL 78
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM-LEFN 160
I + F+ ++ +L ++ E+ + F + K Y +++LP++A++ F M EF
Sbjct: 79 IENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFY 138
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFCFNGDI 217
CKP K N +L +++ + R A + + A +LPN S+N+++++ C G +
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDR-ALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLV 197
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A LF +M R +PD +Y LM GLC+ +++ AV LL++M +G P ++ L
Sbjct: 198 DNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVL 257
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N LC+K KL+ M +KGC P+ V YNT++ G C +G+ A +L+ M S+ C
Sbjct: 258 INGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKC 317
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+PN V+Y T++ GL QG + + LM +G+ + V L+ G GK +EA
Sbjct: 318 VPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMR 377
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +E + G + + +V +C + ++ ++L+E+
Sbjct: 378 LFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEM 417
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 40/349 (11%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P +TY L+ + + D A+ M C P P N ++ L ++ R
Sbjct: 213 VPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVT- 271
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF------------------ 228
L + G +PN +YN ++ C G + A +L ++M
Sbjct: 272 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGL 331
Query: 229 -----------------ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
ERG + + Y +L+ GL ++ + A+ L ++ ++KG +T
Sbjct: 332 VKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNT 391
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+ Y+ L++ LCR +K EA K+L M KGC P+ +++++ GF G + A +V +D
Sbjct: 392 VLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKD 451
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M C N V Y L+ GLC G A M++ G P ++I+G C+ G
Sbjct: 452 MTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGS 511
Query: 392 VDEACGVLEEL--LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V+EA + E+ L+ P T+ ++ +C + + ++LN ++
Sbjct: 512 VEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSML 560
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK + G NT Y+ ++ C + A + ++M ++G P+ ++ LM+
Sbjct: 375 AMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMK 434
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G ++A+++ +DM + + Y+ L++ LC+ K+ EA + +M GC P
Sbjct: 435 GFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRP 494
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-----PNLVSYRTLVGGLCDQGMFDV 359
D+V Y++++ G C G +A K+ +M CL P++++Y L LC Q
Sbjct: 495 DVVAYSSMIQGLCDAGSVEEALKLYNEML---CLEPDSQPDVITYNILFNALCKQSSISR 551
Query: 360 AKKYMQLMISKGFSPHFSVSHA-------------------------LIKGFCNVGKVDE 394
A + M+ +G P + L+K N+G
Sbjct: 552 AVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLG---- 607
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
A ++E +L+ +P TW +V ++C ++++ +
Sbjct: 608 ASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAV 643
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 40/256 (15%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH----RNYL 182
P+ FT+ L+K + E +A++ ++ M + NC N + ++ H +
Sbjct: 423 APNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAE-----NEVCYSVLIHGLCKDGKV 477
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF--ERGVMPDVESYR 240
A ++ G P+ +Y+ M++ C G + A L+N+M E PDV +Y
Sbjct: 478 MEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYN 537
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL---REAYKLLCRM 297
IL LC++S ++RAVDLL ML++G PD ++ L L ++KL ++ K L
Sbjct: 538 ILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML--REKLDPPQDGAKFL--- 592
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ +V+ + R + A K++E M P ++ +V LC
Sbjct: 593 ------------DELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQP--- 637
Query: 358 DVAKKYMQLMISKGFS 373
K +Q +I K +S
Sbjct: 638 ----KKIQAVIDKCWS 649
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 195/373 (52%), Gaps = 9/373 (2%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
LI + DP A EIF+ Q F H+++TY +I KL RAK F +D +L + E
Sbjct: 56 LIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCK 115
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHR--NYLRP 184
SLF L+K +A+S+ +R ++ F + KP K ++ L LLV + + LR
Sbjct: 116 FHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRG 175
Query: 185 -AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV-MPDVESYRIL 242
DL K H + PNT +NI ++ C +GD+ A+ + +M + + P++ +Y L
Sbjct: 176 FLLDLNKD---HMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTL 232
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
M GLC ++ A++L E+M++K +PD L+Y L+N K+ A K++ MK G
Sbjct: 233 MDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNG 292
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+P++ +Y+ ++ GFC+EGR +A E+M G + V Y L+ C G D A
Sbjct: 293 CSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAM 352
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + L++GFC G+ +EA G+L L G ++ ++ +++ +
Sbjct: 353 ALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSL 412
Query: 422 CAGEEMEKLGEVL 434
C +++K E+L
Sbjct: 413 CQKGDLDKALELL 425
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 1/261 (0%)
Query: 182 LRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L+ A +LF+ K +LP+ +YN+++ F G + A + M G P+V +Y
Sbjct: 242 LKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYS 301
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
LM G C++ ++ A+D E+M G DT+ YT L+N CR ++ EA LL MK
Sbjct: 302 ALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKET 361
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C DIV N ++ GFC EGR +A +L + S G N SYR ++ LC +G D A
Sbjct: 362 KCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKA 421
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ + L +S+GF PH + S+ L+ G C G D+A L L + G P +D+W ++V
Sbjct: 422 LELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEF 481
Query: 421 ICAGEEMEKLGEVLNEIVKVE 441
+C ++ E+L+E+ E
Sbjct: 482 VCRERKLLLAFELLDELTANE 502
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 10/250 (4%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVM---PDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+M+ F + + +FNK+ + ++ P +++ + L QV+ L D L
Sbjct: 124 LMKYFAKSSEFERVVEMFNKI--QPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLD-L 180
Query: 264 NKGFV--PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREG 320
NK + P+T + + C+ L A+ ++ MK + P+++ Y+T++ G C G
Sbjct: 181 NKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESG 240
Query: 321 RAIDACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
R +A ++ E+M S + LP+ ++Y L+ G G D AKK M+ M S G SP+
Sbjct: 241 RLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNY 300
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
AL+ GFC G+++EA EE+ G + +++ C +++ +L E+ +
Sbjct: 301 SALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKE 360
Query: 440 VEIKGDTRIV 449
+ K D V
Sbjct: 361 TKCKADIVTV 370
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+ N+++R FC G A + N++ G+ + SYRI++ LC+K +++A++LL
Sbjct: 369 TVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLT 428
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++GFVP + LL LC+ +A L + G P+ + +V CRE +
Sbjct: 429 LSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKL 488
Query: 323 IDACKVLEDMPSNGC 337
+ A ++L+++ +N C
Sbjct: 489 LLAFELLDELTANEC 503
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 1/170 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + D A+ M E CK +N +L A +
Sbjct: 335 YTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCG-EGRTEEALGMLNRL 393
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ N SY I++ + C GD+ A L RG +P + L+ GLC+
Sbjct: 394 SSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMA 453
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ AV L + GF P+ S+ L+ +CR++KL A++LL + C
Sbjct: 454 DDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANEC 503
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 37/412 (8%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V ++ Q DPL A E+F+ R+ F+HS TY +I KLG F ++++L
Sbjct: 7 PKHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAET 66
Query: 122 KSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + + ++ +K Y A+ F M +NC+P N I+ +LV
Sbjct: 67 RMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILV-ESG 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC-----------FNGDISI---------- 219
Y + A +F G++P+ ++ I +++FC N +S
Sbjct: 126 YFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYC 185
Query: 220 --------------AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
AY LFN M G+ PDV ++ L+ LC+K +V + LL +L K
Sbjct: 186 TVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK 245
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G + ++ + LCRK L A +L + +G PD+V YNT++ G C+ ++A
Sbjct: 246 GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
K L + + G P+ +Y TL+ G C GM A+K +Q I KGF P +LI G
Sbjct: 306 EKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLING 365
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C ++D A + L G P + M++ +C + + +++NE+
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEM 417
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 177/349 (50%), Gaps = 17/349 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ + +P+ N+ IL+ + YF + + +K+ + P ++T+ I+I
Sbjct: 100 ERMDFYNCEPSVLSYNAIMNILV----ESGYFKQAHKVFLRMKN--VGIVPDVYTFTIRI 153
Query: 140 --YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDLFKSAH 193
+ + P AL+ +M+ C QLN + V NY A++LF
Sbjct: 154 KSFCRTKRPHSALRLLNNMVSQGC-----QLNAVAYCTVVAGFYEENYRVEAYELFNDML 208
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G+ P+ ++N ++ C G++ + L NK+ ++G+ ++ ++ I +QGLCRK ++
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ +L+ ++ +G PD ++Y TL+ LC+ + EA K L ++ G PD YNT++
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+C+ G +A K+L+ G +P+ +Y +L+ GLC D A + KG
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P + + LIKG C G + +A ++ E+ + G + T+ +++ +C
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ L A + S + G+ P+ +YN ++ C N ++ A +K+ G+ PD +
Sbjct: 264 KGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFT 323
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G C+ + A +L+ + KGFVPD +Y +L+N LC+ ++ A L
Sbjct: 324 YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAAL 383
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG P ++ YN ++ G C+EG + A +++ +M NGC ++ +Y ++ GLC G
Sbjct: 384 GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVS 443
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A M I+KG+ P + LI G+C K++ +L ++ G P T+ ++
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+ + E L E +V+
Sbjct: 504 NGLSKAVKNEDLMETFETMVE 524
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPA 185
P FTY LI Y + + A K + + CK L+ + + + A
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAI---CKGFVPDEFTYCSLINGLCQNDEIDRA 375
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF +A G+ P YN++++ C G I A + N+M E G D+ +Y +++ G
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A +L+ D + KG+VPD ++ TL++ C++ K+ ++L +M G PD
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ YN+V+ G + + D + E M GC+PN ++Y L LC G + A +
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+++KG +P +I GF N G + A
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGA 585
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 129/251 (51%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ +YN ++ +C G + A + +G +PD +Y L+ GLC+ +++RA
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRA 375
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L L KG P + Y L+ LC++ + +A +++ M GC+ DI YN V+ G
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ G DA ++ D + G +P++ ++ TL+ G C Q + + + M S G +P
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++++ G K ++ E +++ G P++ T+ ++ +C ++ + ++++
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555
Query: 436 EIVKVEIKGDT 446
EI+ I DT
Sbjct: 556 EILNKGITPDT 566
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 125/237 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A + + A G +P+ +Y ++ C N +I A LFN +G+ P V Y +
Sbjct: 337 LQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNM 396
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC++ + +A+ ++ +M G D +Y ++N LC+ + +A L+ KG
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ +NT++ G+C++ + ++L M S+G P++++Y +++ GL +
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLM 516
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + M+ KG P+ + L + C GKV+EA +++E+L G P ++ I+
Sbjct: 517 ETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
A+ +PD + TF ++++ CK L + + HGV P+
Sbjct: 454 AKGYVPD--VFTFNTLIDGYCKQLK----------------METTIQILNKMWSHGVTPD 495
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YN ++ F M E+G +P+ +Y IL + LC+ +VN A+DL++
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH----YNTVVLGF 316
++LNKG PDT+S+ T+++ L+ AY+L RM G + H YN ++ F
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM---GEQYKVSHTTATYNIMINAF 612
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
+ K+ +M + GC P+ +YR ++ G C G D K++ MI KGF P
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP-------HEDTWVMIVPQI 421
+ +I C +V EA ++ ++ G P D V+ P+I
Sbjct: 673 TTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEADKKVVAAPKI 724
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 163/379 (43%), Gaps = 49/379 (12%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P FTY LI +++ DRAL F + L KP N +++ L + A
Sbjct: 353 VPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGL-CQEGLILQAL 411
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ ++G + +YN+++ C G +S A L N +G +PDV ++ L+ G
Sbjct: 412 QMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++ + +L M + G PD ++Y ++LN L + K + + M KGC P+
Sbjct: 472 CKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNK 531
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG----------- 355
+ YN + C+ G+ +A +++++ + G P+ VS+ T++ G + G
Sbjct: 532 ITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRR 591
Query: 356 ----------------MFDVAKKYMQL---------MISKGFSPHFSVSHALIKGFCNVG 390
M + + + L M + G +P +I GFC G
Sbjct: 592 MGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITG 651
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN---------EIVKVE 441
D L E+++ G P T+ ++ +C + + ++++ E+V
Sbjct: 652 NTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSI 711
Query: 442 IKGDTRIVEA-GIGLEDYL 459
+ D ++V A I +ED L
Sbjct: 712 SEADKKVVAAPKIVVEDLL 730
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%)
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
M+++ G + A +F +M P V SY +M L +A + M N G
Sbjct: 83 MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD ++T + S CR K+ A +LL M +GC + V Y TVV GF E ++A +
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYE 202
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ DM G P++ ++ L+ LC +G +++ + ++ KG + + I+G C
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G + A +L+ +++ G P T+ ++ +C + + + L+++V ++ D
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K + I I K + VTP + TY ++ +++ + ++TF +M+E C P
Sbjct: 470 GYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVP 529
Query: 164 -------------LPKQLNRILELL---------------------VTHRNYLRPAFDLF 189
++N L+L+ + L+ A+ LF
Sbjct: 530 NKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLF 589
Query: 190 KS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ ++ V T +YNIM+ AF D+ + LF +M G PD +YR+++ G C
Sbjct: 590 RRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCI 649
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ L +M+ KGF+P ++ ++N LC + ++ EA ++ M G P++V
Sbjct: 650 TGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV- 708
Query: 309 YNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
N++ + + + A K V+ED+ C+ +Y L G+ D+
Sbjct: 709 -NSISEA---DKKVVAAPKIVVEDLLKRSCIT-YYAYELLYDGIRDK 750
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 35/201 (17%)
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV--------------------- 312
Y + S RK K++EA + RM C P ++ YN +
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138
Query: 313 --------------VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ FCR R A ++L +M S GC N V+Y T+V G ++
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+ G P S + L+ C G+V E+ +L ++LK G + T+ + +
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+C + +L+ +++
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIR 279
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 212/412 (51%), Gaps = 4/412 (0%)
Query: 32 CYSSSSQESPSSPEQQQESSI-SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN 90
C+S ++ P + S++ +N K+ S L+ + DP A +IF+ AS+Q
Sbjct: 26 CFSEKKKKKLDPPPESSISTMETNPKTKFISHESTVSLMKRERDPQRALDIFNKASQQKG 85
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
F H+N+TY +L+ L R K F +D IL +K E SLF L++ ++ +L D+ +
Sbjct: 86 FNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRFDLHDKVM 145
Query: 151 KTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ F + + KP ++ L LL+ L + H + PNT +NI+++
Sbjct: 146 EMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVK 205
Query: 210 AFCFNGDISIAYTLFNKMFERGV-MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GF 267
C NGDI A+ + +M G+ P+ +Y LM L +S+ AV+L EDM++K G
Sbjct: 206 HHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGI 265
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD + + ++N CR ++ A +L MK GCNP++ +Y+ ++ GFC+EG+ +A +
Sbjct: 266 SPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQ 325
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V +++ G + V Y TL+ LC G D A K + M + + +++G
Sbjct: 326 VFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLS 385
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ G+ +EA +L++ G ++ ++ +I+ +C E+EK + L+ + K
Sbjct: 386 SEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSK 437
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 133/257 (51%), Gaps = 1/257 (0%)
Query: 183 RPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF+ K G+ P+ +N+M+ FC +G++ A + + M + G P+V +Y
Sbjct: 250 KEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSA 309
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C++ ++ A + +++ G DT+ YTTL+N LCR ++ EA KLL MK
Sbjct: 310 LMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASR 369
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ G EGR+ +A ++L+ G N SYR ++ LC G + A
Sbjct: 370 CRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAV 429
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K++ +M +G PH + + L+ C G + VL L G P +W +V I
Sbjct: 430 KFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESI 489
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++ + E+L+ +
Sbjct: 490 CKERKLVHVFELLDSLA 506
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 256 VDLLEDML-----NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHY 309
VDL +L N P+T + L+ C+ + A++++ MK G + P+ + Y
Sbjct: 177 VDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITY 236
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
+T++ + R+ +A ++ EDM S G P+ V + ++ G C G + AK + M
Sbjct: 237 STLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMK 296
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G +P+ AL+ GFC GK+ EA V +E+ K G + ++ +C E++
Sbjct: 297 KNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEID 356
Query: 429 KLGEVLNEIVKVEIKGDT 446
+ ++L E+ + D
Sbjct: 357 EAMKLLGEMKASRCRADA 374
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 185 AFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D+F K++ + G N +Y++++ + + ++M + LM
Sbjct: 73 ALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 132
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-G 301
+ R ++ +++ + V P + +T LN L ++ A KLL K
Sbjct: 133 RHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLA 192
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFDVA 360
P+ +N +V C+ G A +V+E+M +G PN ++Y TL+ L Q A
Sbjct: 193 LQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEA 252
Query: 361 KKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+ + MISK G SP + + +I GFC G+V+ A +L+ + K G P+ + ++
Sbjct: 253 VELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMN 312
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDT 446
C ++++ +V +E+ K +K DT
Sbjct: 313 GFCKEGKIQEAKQVFDEVKKTGLKLDT 339
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 85/240 (35%), Gaps = 36/240 (15%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P +F +I + S +RA M + C P + ++ ++ A +F
Sbjct: 269 PVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCK-EGKIQEAKQVF 327
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-------------------- 229
K G+ +T Y +M C NG+I A L +M
Sbjct: 328 DEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSE 387
Query: 230 ---------------RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
GV + SYRI++ LC ++ +AV L M +G P ++
Sbjct: 388 GRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATW 447
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+ LC ++L G P + VV C+E + + ++L+ + S
Sbjct: 448 NELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKLVHVFELLDSLAS 507
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 189/370 (51%), Gaps = 5/370 (1%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ DP ++ +IF + +++ +ST+ LI F ++ +L ++ E V
Sbjct: 37 EHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEK 96
Query: 132 LFTYLIKIYAESNLPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
F + K Y +++LP++A+ F M EF CK K N +L +++ + R A + +
Sbjct: 97 CFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYR-ALEFYN 155
Query: 191 ---SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
A + PN ++N++++ C G + A +F M PDV +Y LM GLC
Sbjct: 156 HVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLC 215
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +++ AV LL++M G P +++ L+N LC+K L KL+ M +KGC P+ V
Sbjct: 216 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEV 275
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G C +G+ A +L+ M S+ C+PN+V+Y T++ GL QG + + LM
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALM 335
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+G+ + V ALI G GK EA + +E+ + + ++ +C +
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395
Query: 428 EKLGEVLNEI 437
++ EVL+E+
Sbjct: 396 DEALEVLSEM 405
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 160/348 (45%), Gaps = 38/348 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ T+ +IK + L D A++ FR M C+P +++ L + + A
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGL-CKADRIDEA 223
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G P+ ++N+++ C GD++ L + MF +G P+ +Y L+ G
Sbjct: 224 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHG 283
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK--------------------- 284
LC K ++ +A+ LL+ M++ VP+ ++Y T++N L ++
Sbjct: 284 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVN 343
Query: 285 --------------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
K +EA +L M VK C + + Y+ V+ G CR+G+ +A +VL
Sbjct: 344 EYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLS 403
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M +N C PN +Y +L+ G + G A + + M F+ + LI G C G
Sbjct: 404 EMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDG 463
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
KV EA V ++L G P + ++ + +E ++ NE++
Sbjct: 464 KVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 23/263 (8%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A LFK NT Y+ ++ C +G A + ++M P+ +Y L
Sbjct: 361 QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSL 420
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
M+G ++A+++ +DM F + + Y+ L++ LC+ K++EA + +M KGC
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGC 480
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN--GCLPNLVSYRTLVGGLCDQGMFDVA 360
PD+V Y +++ G G DA ++ +M P++V+Y L+ LC Q A
Sbjct: 481 KPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRA 540
Query: 361 KKYMQLMISKGFSPHFSVS---------------------HALIKGFCNVGKVDEACGVL 399
+ M+ +G P L+ +V A ++
Sbjct: 541 IDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIV 600
Query: 400 EELLKAGEAPHEDTWVMIVPQIC 422
E +L+ P TW +V +C
Sbjct: 601 EVMLQKLLPPKPSTWTRVVEDLC 623
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+++ +I PD AL+ M CKP + +++ N + A +++K
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHK-AIEMWKD 439
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV------------------- 232
KH N Y++++ C +G + A ++ +M +G
Sbjct: 440 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGL 499
Query: 233 ------------------MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
PDV +Y IL+ LC++S ++RA+DLL ML++G PD ++
Sbjct: 500 VEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTC 559
Query: 275 TTLLNSLCRK 284
L +L K
Sbjct: 560 IIFLRTLREK 569
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS- 191
++ LI + A+ + ML CKP ++ L ++ + A L+
Sbjct: 452 YSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL-SNAGLVEDALQLYNEM 510
Query: 192 -AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV-------------- 236
+ P+ +YNI++ A C IS A L N M +RG PD+
Sbjct: 511 LCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKL 570
Query: 237 ---ESYRILMQGLC----RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+ R + GL ++ +V A ++E ML K P ++T ++ LC KK++
Sbjct: 571 DPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQA 630
Query: 290 AYK 292
A +
Sbjct: 631 AIQ 633
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 198/388 (51%), Gaps = 8/388 (2%)
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
+ S +PI +P ++ KL+ D + ++F+ A Q + HS Y +LI KLG F
Sbjct: 52 LQRSLNPI-TPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEF 110
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC-KPLPKQLNR 170
+ID +L +K E SLF +++ Y ++ LP +A + M C +P K N
Sbjct: 111 KMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNV 170
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+LE+LV N + A ++F G+ P ++ ++M+AFC ++ A +L M +
Sbjct: 171 VLEILVAG-NCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKH 229
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G +P+ Y++L+ L ++VN A+ LLE+M G PD ++ +++ LC+ ++ EA
Sbjct: 230 GCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEA 289
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
KL RM ++ D + ++ G CR G+ +A +L +P+ PN V Y TL+ G
Sbjct: 290 AKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLING 345
Query: 351 LCDQGMFDVAKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G F+ AK + + M+ GF P + +I G C G + A L+E++K G P
Sbjct: 346 YVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEP 405
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ T+ +++ C E+ +V+N +
Sbjct: 406 NVITYTILIDGFCKQGHFEEASKVVNSM 433
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 35/275 (12%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + A + S G+ NT YN ++ A C +G I A ++ +M +G PD+ +
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ GLC+ ++ A+ L DML +G + +T++Y TL+++ R + +++A KL+ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 299 VKGCNPDIVHYNTVV------------LG-----------------------FCREGRAI 323
+GC D + YN ++ LG FCR G+
Sbjct: 540 FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVN 599
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA + L DM G P++V+Y +L+ GLC G F A + +KG P + LI
Sbjct: 600 DALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+C G ++AC +L + + G P+E TW +++
Sbjct: 660 SRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 38/292 (13%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L+K+ G P+ ++NIM+ C G + A ++M ++G P+V +Y IL+ G C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ A ++ M KG +T+ Y L+ +LC+ K+++A ++ M KGC PDI
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV------------------- 348
+N+++ G C+ + +A + DM G + N V+Y TL+
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538
Query: 349 ----------------GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
LC G + ++ M + P + + LI FC GKV
Sbjct: 539 RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKV 598
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
++A L ++++ G P T+ ++ +C +M + E LN ++ KG
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLC---KMGRFQEALNLFNGLQAKG 647
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 155/342 (45%), Gaps = 31/342 (9%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN----------RILELLVTHRNY 181
++ LI +E+N + A+K M C+P + N RI E H
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRM 296
Query: 182 LRPAFD---LFKSAHKHGVL-----------------PNTKSYNIMMRAFCFNGDISIAY 221
L F L + HG+ PNT YN ++ + +G A
Sbjct: 297 LLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAK 356
Query: 222 TLFNK-MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L K M G PD ++ I++ GLC+K + A++ L++M+ KGF P+ ++YT L++
Sbjct: 357 DLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDG 416
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C++ EA K++ M KG + + V YN ++ C++G+ DA ++ +M S GC P+
Sbjct: 417 FCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD 476
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ ++ +L+ GLC + A + M+ +G + + LI F + + +A ++
Sbjct: 477 IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVG 536
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
E+ G T+ ++ +C EK ++ ++ EI
Sbjct: 537 EMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI + +F ++ ++ ++ + + LI + AL+ + M
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
CKP N ++ L + + + A L++ GV+ NT +YN ++ AF
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKN-DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A L +M RG D +Y L++ LC+ + + L+E M + P S
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+NS CR K+ +A + L M +G PDIV YN+++ G C+ GR +A + + + G
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
P+ V+Y TL+ C +G+F+ A + + +S GF P+ LI F
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P+ S NI++ +FC G ++ A M +RG+ PD+ +Y L+ GLC+ + A+
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L + KG PD ++Y TL++ C + +A +LL + G P+ + ++ ++ F
Sbjct: 638 NLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697
Query: 317 CR 318
+
Sbjct: 698 VK 699
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 1/198 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI R + D ++ ++ P+ + LIK ++ ++ L M
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
P N ++ + A + + G+ P+ +YN ++ C G
Sbjct: 574 FGEEIFPSINSCNILINSFC-RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A LFN + +G+ PD +Y L+ C + N A LL ++ GF+P+ ++++
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSI 692
Query: 277 LLNSLCRKKKLREAYKLL 294
L+N + E + +L
Sbjct: 693 LINYFVKNNSDSEQFTIL 710
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 185/370 (50%), Gaps = 6/370 (1%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+ ++ + LLA F + +F+H+ TY +I +LG + I +L +K E
Sbjct: 47 LKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISC 106
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
LF +I Y + L ++ALKTF + EF CKP K N +L+ L++ N + +
Sbjct: 107 NEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLS-ENKFQMINGI 165
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ + + G+ N +YN++++A C N + A L +M +G +PD SY ++ +CR
Sbjct: 166 YNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCR 225
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+V A +L M K FVP Y L+N CR+ K+ E ++L M V+G +PD++
Sbjct: 226 LGKVEEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVIT 280
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+TV+ G A VL M GC PN+ ++ +L+ G G A MI
Sbjct: 281 YSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMI 340
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+G P+ + LI G C+ GK+ EA V +++ + G P+E T+ ++ ++
Sbjct: 341 QEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLV 400
Query: 429 KLGEVLNEIV 438
E+ N+++
Sbjct: 401 GASEIWNKMI 410
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 141/264 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ F+LF G+ P+ +Y+ ++ G++ +A + KMF RG P+V ++
Sbjct: 259 MEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTS 318
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM+G ++ A+DL M+ +G P+T++Y TL++ LC K+ EA + +M+ G
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ Y+T++ GF + G + A ++ M +NGCLPN+V Y +V LC MF+ A
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + P+ + IKG C GK + A VL ++ + G AP+ T+ ++ +
Sbjct: 439 HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
+ + +++ EI ++EIK +
Sbjct: 499 FNAKRTREALQIVGEIEEMEIKSN 522
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 152/309 (49%), Gaps = 6/309 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+K Y AL + M++ +P N ++ L ++ + A + +
Sbjct: 316 FTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE-AVSVSQKM 374
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++GV PN +Y+ ++ F GD+ A ++NKM G +P+V Y ++ LCR S
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMF 434
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A+ L+E+M N P+T+++ T + LC K A K+L +M+ GC P++ YN V
Sbjct: 435 NHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEV 494
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G R +A +++ ++ NLV+Y T++ G C GMF A + ++ G
Sbjct: 495 LDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT 554
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA-PHEDTWVMIVPQIC----AGEEM 427
P + +I +C G+V A +++ L K GE P T+ ++ +C E +
Sbjct: 555 KPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAV 614
Query: 428 EKLGEVLNE 436
L +++NE
Sbjct: 615 VHLDKMINE 623
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G Y +++ + ++ K E V P+ TY LI +A++ A + + M+ C P
Sbjct: 357 GLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLP 416
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++++L + + A L ++ PNT ++N ++ C +G A +
Sbjct: 417 NVVVYTCMVDVLCRNSMF-NHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
N+M + G P+V +Y ++ GL + A+ ++ ++ + ++Y T+L+ C
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLV 342
+ A ++ ++ V G PD + YNTV+ +C++G A ++++ + G P++
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVF 595
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+Y +L+ G+C+ D A ++ MI++G P+ + +AL++G
Sbjct: 596 TYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y ++ L R F+ ++ + + + P F IK S + A+K M
Sbjct: 421 YTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMR 480
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
++ C P N +L+ L + R A + + + N +YN ++ FC G
Sbjct: 481 QYGCAPNVTTYNEVLDGLFNAKR-TREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMF 539
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTT 276
A + K+ G PD +Y ++ C++ +V A+ L++ + KG PD +YT+
Sbjct: 540 KGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTS 599
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL +C + EA L +M +G P+ +N +V G + + +++++ +NG
Sbjct: 600 LLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILANG 659
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 38/373 (10%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
EIF ++ +++ + ++ LI + F ++++L +K E F + K
Sbjct: 46 EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105
Query: 140 YAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA--FDLFKSAHKHG 196
Y +++LP++A+ F M EF CK K N +L ++V + R ++ ++
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ PN ++N++++A C G + A +F ++ R PD +Y LM GLC++ +++ AV
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAV 225
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL++M +G P+ +++ L+++LC+K L A KL+ M +KGC P+ V YN +V G
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVS--------------------------------- 343
C +G+ A +L M SN C+PN V+
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345
Query: 344 --YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
Y +L+ GLC +G F+ A + + M+ KG P+ V ALI G C GK+DEA G L E
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSE 405
Query: 402 LLKAGEAPHEDTW 414
+ G P+ T+
Sbjct: 406 MKNKGYLPNSFTY 418
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 173/341 (50%), Gaps = 14/341 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +IK L D+A++ FR + NC P + ++ L + A L
Sbjct: 173 FNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEER-IDEAVSLLDEM 231
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN ++N+++ A C GD+ A L + MF +G +P+ +Y L+ GLC K ++
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKL 291
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+AV LL M++ VP+ +++ TL+N + + + ++L ++ +G + Y+++
Sbjct: 292 EKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSL 351
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+EG+ A ++ ++M GC PN + Y L+ GLC +G D A+ ++ M +KG+
Sbjct: 352 ISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA-GEEMEKL- 430
P+ +L++G+ G +A V +E+ +E + +++ +C G+ ME L
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALM 471
Query: 431 --GEVLNEIVKVEIKG---------DTRIVEAGIGLEDYLI 460
++L+ +K+++ + +VE G+ L + ++
Sbjct: 472 VWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQML 512
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 3/305 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + RA K +M C P N ++ L + L A L
Sbjct: 243 FNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL-KGKLEKAVSLLNQM 301
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ +PN ++ ++ F G S + + RG + Y L+ GLC++ +
Sbjct: 302 VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKF 361
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N+A++L ++M+ KG P+T+ Y+ L++ LCR+ KL EA L MK KG P+ Y+++
Sbjct: 362 NQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSL 421
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ G + A V ++M +N C+ N V Y L+ GLC G F A + M+S+G
Sbjct: 422 MRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGI 481
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED--TWVMIVPQICAGEEMEKL 430
++I GFCN V++ + ++L G D T+ +++ C + + +
Sbjct: 482 KLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRA 541
Query: 431 GEVLN 435
++LN
Sbjct: 542 IDILN 546
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 23/268 (8%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L+K G PNT Y+ ++ C G + A ++M +G +P+ +Y LM+
Sbjct: 364 AMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMR 423
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G ++A+ + ++M N + + + Y+ L+N LC+ K EA + +M +G
Sbjct: 424 GYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKL 483
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL--PNLVSYRTLVGGLCDQGMFDVAKK 362
D+V Y++++ GFC K+ M G + P++++Y L+ C Q A
Sbjct: 484 DVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAID 543
Query: 363 YMQLMISKGFSPHFSVSHALIKGFC------NVGK--VDE-------------ACGVLEE 401
+ +M+ +G P F +K G+ +DE A ++E
Sbjct: 544 ILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEV 603
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEK 429
++ P TW M+V Q+C + + K
Sbjct: 604 MMHKFLLPKASTWAMVVQQVCKPKNVRK 631
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 27/263 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
Y LI L R L +K++ Y P+ FTY L++ Y E+ +A+ ++
Sbjct: 382 VYSALIDGLCREGKLDEARGFLSEMKNKGY--LPNSFTYSSLMRGYFEAGDSHKAILVWK 439
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M NC + ++ L ++ A ++K G+ + +Y+ M+ FC
Sbjct: 440 EMANNNCIHNEVCYSILINGLCKDGKFME-ALMVWKQMLSRGIKLDVVAYSSMIHGFCNA 498
Query: 215 GDISIAYTLFNKMFERG--VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
+ LFN+M +G V PDV +Y IL+ C + + RA+D+L ML++G PD +
Sbjct: 499 NLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFI 558
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP--DIVHY-NTVVLGFCREGRAIDACKVL 329
+ L K LRE NP D + + +V+ + R I A K++
Sbjct: 559 TCDIFL------KTLRE-----------NMNPPQDGREFLDELVVRLVKRQRTIGASKII 601
Query: 330 EDMPSNGCLPNLVSYRTLVGGLC 352
E M LP ++ +V +C
Sbjct: 602 EVMMHKFLLPKASTWAMVVQQVC 624
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 215/471 (45%), Gaps = 56/471 (11%)
Query: 11 KIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESS--ISNSKSP---------- 58
+ V+++ A+ PK+ S F S+ P SP+ E S +S+ ++P
Sbjct: 4 RTVSSLVRALYQTPKSQS--FRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVA 61
Query: 59 ----IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
+ S Q L ++ A F +A R P+F HS +Y IL+ LG +K F+L+
Sbjct: 62 YSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALL 121
Query: 115 DDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
D LI + +Y ++ +F + + Y+ +NLP A + F M+EF KP L+++L
Sbjct: 122 WDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLH 181
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR------------------------ 209
L + ++ A + F A G++P+ K+Y+I++R
Sbjct: 182 SLCD-KKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCV 240
Query: 210 -----------AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
A C +GD+ Y +F +M G+ PD S+ I + C V+ A +
Sbjct: 241 VDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKV 300
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ M VP+ ++ ++ +LC+ +K+ +AY LL M KG NPD YN+++ C
Sbjct: 301 LDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCD 360
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
A K+L M CLP+ +Y ++ L G FD A + + M + F P +
Sbjct: 361 HCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
Query: 379 SHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+I G GK++EAC E ++ G P+ T M+ ++ +M+
Sbjct: 421 YTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
++K + I+ RA+ S A FN+M E G+ P V+ L+ LC K VN A +
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
G VP +Y+ L+ R + A K+ M + C D++ YN ++ C+
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G K+ ++M + G P+ S+ + CD G A K + M P+
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +IK C KVD+A +L+E+++ G P T+ I+ C E+ + ++L+ +
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ I+ + R + + A M+ G P LL+SLC KK + A + + K
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P Y+ +V G+ R A A KV ++M C+ +L++Y L+ LC G D
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
K Q M + G P I +C+ G V A VL+ + + P+ T+ I+
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C E+++ +L+E+++ DT
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDT 348
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 201/406 (49%), Gaps = 39/406 (9%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+SD + +IF AS+ +++ +ST+ LI + F + + +K E
Sbjct: 41 ESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEK 100
Query: 132 LFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
F + + Y +++LP++A++ F M+ EF C+ + N +L +++ + R A + ++
Sbjct: 101 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHR-ALEFYE 159
Query: 191 S--AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
K + PN S+N++++A C G + A +F +M + PDV +Y LM GLC+
Sbjct: 160 CGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK 219
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ +++ AV LL++M +G P ++++ L+N LC+K + KL+ M +KGC P+ V
Sbjct: 220 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVT 279
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ-------------- 354
YNT++ G C +G+ A +L+ M ++ C+PN V+Y TL+ GL Q
Sbjct: 280 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339
Query: 355 ----------------GMF-----DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G+F + A + M+ KG P+ V ALI G C GK+D
Sbjct: 340 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EA +L E++ G P+ T+ ++ +K V E+ K
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 445
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 38/365 (10%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ F +IK + L DRA++ FR M C+P +++ L + + A
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKE-DRIDEA 226
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G P++ ++N+++ C GD+ L + MF +G +P+ +Y ++ G
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 286
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK--------------------- 284
LC K ++++AV LL+ M+ VP+ ++Y TL+N L ++
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346
Query: 285 --------------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+K EA L +M KGC P+IV Y+ ++ G CREG+ +A ++L
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + GC PN +Y +L+ G G A + + M P+ LI G C G
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
K+ EA + +L G P + ++ +C +E ++ NE++ E +V
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526
Query: 451 AGIGL 455
I L
Sbjct: 527 YNILL 531
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 40/348 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY L+ + + D A+ M C P N ++ L + +R
Sbjct: 205 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVT-K 263
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF------------------- 228
L + G +PN +YN ++ C G + A +L ++M
Sbjct: 264 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 323
Query: 229 ----------------ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
ERG + +Y L+ GL ++ + A+ L + M+ KG P+ +
Sbjct: 324 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 383
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y+ L++ LCR+ KL EA ++LC M KGC P+ Y++++ GF + G + A +V ++M
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
N C+PN + Y L+ GLC+ G A M+ +G P ++I G CN G V
Sbjct: 444 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 503
Query: 393 DEACGVLEELL--KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ + E+L ++ P T+ +++ +C + ++LN ++
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 551
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN Y LI L R +IL + ++ TP+ FTY LIK + ++
Sbjct: 379 QPNI----VVYSALIDGLCREGKLDEAKEILCEMVNKG--CTPNAFTYSSLIKGFFKTGN 432
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNT 201
+A++ ++ M + NC P N I ++ H LR A ++ G+ P+
Sbjct: 433 SQKAIRVWKEMAKNNCVP-----NEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 487
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMF--ERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+Y+ M+ C G + + LFN+M E PDV +Y IL++ LC+++ ++ A+DLL
Sbjct: 488 VAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLL 547
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
ML++G PD ++ LN+L R K+ + +V+ +
Sbjct: 548 NSMLDRGCNPDLITCNIFLNAL--------------REKLNPPQDGREFLDELVVRLHKR 593
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
R + A K++E M PN ++ ++ LC K +Q +I K +S F
Sbjct: 594 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELC-------KPKKVQAIIDKCWSSLF 643
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 182/363 (50%), Gaps = 37/363 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ AS D L +F A + +++ S + Y ++I +L A+ F ++++L
Sbjct: 37 APNEVLKIFASIRDAALITSVFRKACARRDYKPSEALYGLMIDRLAGARRFGDVEELLAR 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++E + + F LIK+Y +N P++A++T +M E+ C
Sbjct: 97 ARAERFRFSDDFFYRLIKMYGNVANHPEKAMETLYAMSEYGC------------------ 138
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
P+TK++N ++ + + +++ GV D +
Sbjct: 139 ------------------WPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCF 180
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL++GLC+ + N A+ LL++M + P+ ++Y+TL++ LCR ++ EA++L RM+
Sbjct: 181 NILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRK 240
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ + D V YN +V G CREGR A + + M S GC PN +Y+ L+ GL F
Sbjct: 241 EEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVE 300
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK + +M ++ P FS LI GFC+V +D+A VL++++ G P TW ++
Sbjct: 301 AKDLVGMMSAESLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLLT 360
Query: 420 QIC 422
+C
Sbjct: 361 SLC 363
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%)
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
ER D YR++ + +A++ L M G P T ++ +L+ L +++
Sbjct: 100 ERFRFSDDFFYRLIKMYGNVANHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYE 159
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+++ G D +N ++ G C+ GR +A +L++MP C PN ++Y TL+
Sbjct: 160 VVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLM 219
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC D A + + M + V + L+ G C G+V A + + + G
Sbjct: 220 HFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCH 279
Query: 409 PHEDTWVMIVPQICAGE 425
P+ T+ +++ + A +
Sbjct: 280 PNSGTYQVLLDGLVASK 296
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAI 323
+ + P Y +++ L ++ + +LL R + + D Y + +
Sbjct: 65 RDYKPSEALYGLMIDRLAGARRFGDVEELLARARAERFRFSDDFFYRLIKMYGNVANHPE 124
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A + L M GC P+ ++ ++ L + ++V + G + LI
Sbjct: 125 KAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNILI 184
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
KG C G+ +EA +L+E+ K P+ T+ ++ +C +++ E+ + K EI
Sbjct: 185 KGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEID 244
Query: 444 GDT 446
DT
Sbjct: 245 ADT 247
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 197/380 (51%), Gaps = 3/380 (0%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
+N K+ S L+ + DP +IF+ AS+Q F H+N+TY +L+ L R K F
Sbjct: 47 TNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFL 106
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM-LEFNCKPLPKQLNRI 171
+D IL +K E SLF L++ ++ S+L D+ ++ F + + KP ++
Sbjct: 107 AVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTC 166
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L LL+ L + H G+ PNT +NI+++ C NGDI+ A+ + +M G
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 232 V-MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLRE 289
+ P+ +Y LM L S+ AV+L EDM++K G PD +++ ++N CR ++
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A K+L MK GCNP++ +Y+ ++ GFC+ G+ +A + +++ G + V Y TL+
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C G D A K + M + + +++G + G+ +EA +L++ G
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 410 HEDTWVMIVPQICAGEEMEK 429
++ ++ +I+ +C E+EK
Sbjct: 407 NKGSYRIILNALCCNGELEK 426
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 1/257 (0%)
Query: 183 RPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF+ K G+ P+ ++N+M+ FC G++ A + + M + G P+V +Y
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C+ ++ A +++ G DT+ YTTL+N CR + EA KLL MK
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ G EGR+ +A ++L+ S G N SYR ++ LC G + A
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K++ +M +G PH + + L+ C G + VL L+ G P +W +V I
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++ + E+L+ +V
Sbjct: 489 CKERKLVHVFELLDSLV 505
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLL-EDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
V P + + + L +VN + LL N G P+T + L+ C+ + A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 291 YKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCLPNLVSYRTLV 348
+ ++ MK G + P+ + Y+T++ R+ +A ++ EDM S G P+ V++ ++
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C G + AKK + M G +P+ AL+ GFC VGK+ EA +E+ K G
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ C E ++ ++L E+ + DT
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
+T +YN+++R G A + ++ GV + SYRI++ LC ++ +AV
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L M +G P ++ L+ LC ++L G P + VV C+
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 319 EGRAIDACKVLEDMPS 334
E + + ++L+ + S
Sbjct: 491 ERKLVHVFELLDSLVS 506
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 35/353 (9%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
T S+F ++K Y+ +L D+AL P N +L+ + + + A ++
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
FK + V PN +YNI++R FCF G+I +A TLF+KM +G +P+V +Y L+ G C+
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+++ LL M KG P+ +SY ++N LCR+ +++E +L M +G + D V
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 309 YNTVVLGFCREGRAIDA--------------------------CKV---------LEDMP 333
YNT++ G+C+EG A CK L+ M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN +Y TLV G +G + A + ++ M GFSP +ALI G C GK++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A VLE++ + G +P ++ ++ C ++++ V E+V+ IK DT
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 9/347 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
TY ILI R F+ D+ +TL K E P++ TY LI Y + D K
Sbjct: 207 TYNILI----RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
RSM +P N ++ L +F + ++ G + +YN +++ +C
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G+ A + +M G+ P V +Y L+ +C+ +NRA++ L+ M +G P+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YTTL++ +K + EAY++L M G +P +V YN ++ G C G+ DA VLEDM
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++VSY T++ G C D A + + M+ KG P +LI+GFC +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EAC + EE+L+ G P E T+ ++ C ++EK ++ NE+V+
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 2/334 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++I L R + +L + Y + + LIK Y + +AL M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P ++ + N R A + G+ PN ++Y ++ F G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNR-AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ AY + +M + G P V +Y L+ G C ++ A+ +LEDM KG PD +SY+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L+ CR + EA ++ M KG PD + Y++++ GFC + R +AC + E+M G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ +Y L+ C +G + A + M+ KG P LI G + EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
+L +L P + T+ ++ C+ E + +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSV 608
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 57/360 (15%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKS 191
+T L+ +++ + A + R M + P N ++ VT + + A + +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK--MEDAIAVLED 440
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ P+ SY+ ++ FC + D+ A + +M E+G+ PD +Y L+QG C + +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN- 310
A DL E+ML G PD +YT L+N+ C + L +A +L M KG PD+V Y+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 311 -------------------------------------------------TVVLGFCREGR 321
+++ GFC +G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVS 379
+A +V E M P+ +Y ++ G C G D+ K Y + M+ GF H
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG--DIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
AL+K GKV+E V+ +L++ E + ++V M+ + +VL E+ K
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
KS +++ FC G ++ A +F M + PD +Y I++ G CR + +A L ++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC-REG 320
M+ GF+ T++ L+ +L ++ K+ E ++ + ++ C V++ REG
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV-LRSCELSEAEQAKVLVEINHREG 724
Query: 321 RAIDACKVLEDMPSNGCLPNLVS 343
VL +M +G LPN +S
Sbjct: 725 NMDVVLDVLAEMAKDGFLPNGIS 747
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 194/366 (53%), Gaps = 4/366 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+++++F A + +F+ +ST +I + F ++ +L ++ E+ + F +
Sbjct: 59 ISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVV 118
Query: 137 IKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA--FD-LFKSA 192
+ Y +++LPD+A+ F M+ EF CK K N +L +++ Y R +D + S
Sbjct: 119 FRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN S+N++++A C + A +F M ER +PD +Y LM GLC++ ++
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ AV LL++M ++G P + Y L++ LC+K L KL+ M +KGC P+ V YNT+
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C +G+ A +LE M S+ C+PN V+Y TL+ GL Q A + + M +G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + LI G GK +EA + ++ + G P+ + ++V +C + + E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 433 VLNEIV 438
+LN ++
Sbjct: 419 ILNRMI 424
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 168/314 (53%), Gaps = 1/314 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +IK + DRA++ FR M E C P +++ L + A L
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER-IDEAVLLLDEM 248
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P+ YN+++ C GD++ L + MF +G +P+ +Y L+ GLC K ++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++AV LLE M++ +P+ ++Y TL+N L ++++ +A +LL M+ +G + + Y+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G +EG+A +A + M GC PN+V Y LV GLC +G + AK+ + MI+ G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ +L+KGF G +EA V +E+ K G + ++ + +++ +C +++
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 433 VLNEIVKVEIKGDT 446
V ++++ + IK DT
Sbjct: 489 VWSKMLTIGIKPDT 502
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 32/339 (9%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
++ TY LI L + + + +L +++ Y + +++ LI + + A+ +
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R M E CKP + +++ L A ++ G LPN +Y+ +M+ F
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGL-CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G A ++ +M + G + Y +L+ GLC +V A+ + ML G PDT++
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 274 YTTLLNSLCRKKKLREAYKL----LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
Y++++ LC + A KL LC+ + K PD+V YN ++ G C + A +L
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS-QPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 330 EDMPSNGCLPNLVSYRTLVGGL------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
M GC P++++ T + L CD+G + +++ ++ +
Sbjct: 564 NSMLDRGCDPDVITCNTFLNTLSEKSNSCDKG-----RSFLEELVVRLLKRQ-------- 610
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+V AC ++E +L AP TW MIV +IC
Sbjct: 611 -------RVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 21/113 (18%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS-------- 250
P+ +YNI++ C DIS A L N M +RG PDV + + L KS
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRS 597
Query: 251 -------------QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
+V+ A ++E ML K P T ++ ++ +C+ KK+ A
Sbjct: 598 FLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 203/424 (47%), Gaps = 9/424 (2%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSP-------IGSPCRVQKLIASQSDPL 76
PK P + ++S+ QE+ S E N P SP V +I + +P
Sbjct: 14 PKPPWVQSLHTSAIQETSISDEVFTVIKTMNPMEPALEPMVPFLSPKIVTSIIQNPPNPQ 73
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L F +AS FR S LI L + + L L LK+ V F L
Sbjct: 74 LGFRFFIWASNFKRFRAWESCDLITDLLINQNG-LELYCQTLEALKNGGIKVHNDAFFVL 132
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
IK+Y + L D+A++TF SM +F+C P N IL++L+ +N+L A ++ K
Sbjct: 133 IKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLI-QKNFLLLALTVYTRMMKLN 191
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
LPN +++I++ C +G++ A LF++M +RG++PD +Y +++ GLCR +V+ A
Sbjct: 192 CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAY 251
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L + M + G PD ++ LLN C ++ EA+ LL + G D+ Y+ ++ G
Sbjct: 252 RLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGL 311
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
R R D + M + P++ Y ++ GL + G A + + M G P
Sbjct: 312 FRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDT 371
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ LIKGFC++G + EA + E+ + P+ T+ +++ +C E+ NE
Sbjct: 372 VCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNE 431
Query: 437 IVKV 440
+ K+
Sbjct: 432 MEKL 435
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 144/362 (39%), Gaps = 51/362 (14%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P FTY + I S D A + F M + P N +L + + A
Sbjct: 227 ILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM-LDRVDEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L + K G + + + Y+ ++R L+ KM E V PDV Y I+M+G
Sbjct: 286 FSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKG 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L +V A++LL +M G VPDT+ Y L+ C L EA L + C P+
Sbjct: 346 LAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPN 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC------------- 352
+ Y+ ++ G CR G DA ++ +M GC P+ V++ +L+ GLC
Sbjct: 406 VKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFY 465
Query: 353 -----------------------------------DQGMFDVAKKYMQLMISKGFSPHFS 377
D G+ A + + + G +P
Sbjct: 466 KMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIY 525
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ L+ GFC +G + A + E+ G +P T+ ++ + + E +V +++
Sbjct: 526 TYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQM 585
Query: 438 VK 439
K
Sbjct: 586 EK 587
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 15/345 (4%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y LI L RAK + + + + ++ L+T ++K AE+ AL+ M
Sbjct: 304 YSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT 363
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
E P N +++ L A L +H PN K+Y+I++ C NG
Sbjct: 364 ESGVVPDTVCYNVLIKGFCDM-GLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLT 422
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM-----------LNKG 266
A +FN+M + G P ++ L+ GLC+ Q+ +A L M L++G
Sbjct: 423 RDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQG 482
Query: 267 --FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
V D+ S ++ LC + +AY++L ++ G P I YN +V GFC+ G
Sbjct: 483 PSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNG 542
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+ +M G P+ V+Y TL+ GL + A K M G +P +V ++
Sbjct: 543 AYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMT 602
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
C ++ A + + L+ + ED + + +E+EK
Sbjct: 603 WMCRRMELPRAFSLWLKYLRNIRS-QEDEAIKAIEGYFEKQEVEK 646
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
YL I+ G A+ + D + + + V P Y LIK + + L A
Sbjct: 335 DVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQ 394
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYL-RPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +C P K + ++ + RN L R A ++F K G P+ ++N ++ C
Sbjct: 395 LEISRHDCFPNVKTYSILISGMC--RNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLC 452
Query: 213 FNGDISIAYTLFNKMFERGVMP--------------DVESYRILMQGLCRKSQVNRAVDL 258
G + A+ LF KM E G P D S + +++ LC +++A +
Sbjct: 453 KTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRI 511
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L + + G P +Y L+N C+ AYKL M+ KG +PD V Y T++ G R
Sbjct: 512 LMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLR 571
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
R DA KV + M NGC P+ YRT++ +C
Sbjct: 572 FQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMC 605
>gi|242074342|ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 172/324 (53%), Gaps = 2/324 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ A+ DP L +F A + +++ S + Y ++I KL A+ FS ++++L
Sbjct: 37 APNEVLKIFANIRDPSLINSVFKKACSRIDYKPSEALYSLMIDKLAFARRFSDVEELLSK 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K+E + F LIK+Y + P +A+ T +M +NC P K N +L +LV R
Sbjct: 97 AKTEKLRFSDEFFYRLIKMYGNVAEHPQKAIDTLFAMPGYNCWPSTKTFNYVLHMLVCKR 156
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y +++ SA + GV +T S+NI+++ C A +L ++M ++G P+V +Y
Sbjct: 157 QY-EVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISLLHEMPKQGCQPNVATY 215
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
M LC++S V++A +L E M + DT+ Y L++ LCR++++ EA+ L M
Sbjct: 216 STFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCREERVSEAFDLFKSMTS 275
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+GC P+ Y ++ G G+ +A ++ M + G P+ SY+ L+ GLC + D
Sbjct: 276 EGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMSTEGVRPSFQSYKLLIDGLCSEDCVDD 335
Query: 360 AKKYMQLMISKGFSPHFSVSHALI 383
A ++ M+ +GF P L+
Sbjct: 336 AHLVLKQMVGQGFVPRMGTWTKLL 359
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P +++ ++ L K Q ++ G DT S+ L+ LC+ K EA L
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISL 199
Query: 294 LCRMKVKGCNPDI-----------------------------------VHYNTVVLGFCR 318
L M +GC P++ V YN ++ G CR
Sbjct: 200 LHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCR 259
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
E R +A + + M S GC PN +Y+ L+ GL G F AK + M ++G P F
Sbjct: 260 EERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMSTEGVRPSFQS 319
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
LI G C+ VD+A VL++++ G P TW ++ I
Sbjct: 320 YKLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLLTSI 362
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 7/186 (3%)
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTV-VLGFCRE--GRA 322
+ P Y+ +++ L ++ + +LL + K + D Y + + G E +A
Sbjct: 67 YKPSEALYSLMIDKLAFARRFSDVEELLSKAKTEKLRFSDEFFYRLIKMYGNVAEHPQKA 126
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
ID L MP C P+ ++ ++ L + ++V + G + + L
Sbjct: 127 IDT---LFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNIL 183
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+KG C K DEA +L E+ K G P+ T+ + +C ++K E+ + K +I
Sbjct: 184 VKGLCQCSKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDI 243
Query: 443 KGDTRI 448
DT +
Sbjct: 244 AADTVV 249
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 39/411 (9%)
Query: 44 PEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILIL 103
P E S++ + + + Q L ++ A F +A P F+HS ++ IL+
Sbjct: 60 PHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVE 119
Query: 104 KLGRAKYFSLIDDILITLK-SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
LG K F+++ D L ++ S HY + +F + + Y+++NLPD A+++F M EF K
Sbjct: 120 ILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVK 179
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P L+++L +L R +++ A LF A K+ K+Y+I++ + GD A
Sbjct: 180 PTIHDLDKLLFILCK-RKHVKQAQQLFHQA-KNRFSLTAKTYSILISGWGEIGDSEKACD 237
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
LF M E+G D+ +Y L+Q LC+ +V+ A ++ DML+K PD +Y+ ++S C
Sbjct: 238 LFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYC 297
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
++ A+++L +M+ P++ YN ++ C+ +A ++L++M S G P+
Sbjct: 298 DADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTW 357
Query: 343 SYRTLVGGLCDQ-----------------------------------GMFDVAKKYMQLM 367
SY + CD G FD + + M
Sbjct: 358 SYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENM 417
Query: 368 ISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ K F P S +I GFC GK++EAC E ++ G P+ T M+
Sbjct: 418 VDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEML 468
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ +T ++ LI + E ++A F++MLE C N +L+ L + A
Sbjct: 212 FSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCK-GGRVDEA 270
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F V P+ +Y+I + ++C D+ A+ + +KM ++P+V +Y +++
Sbjct: 271 KNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQ 330
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V A LL++M+++G PDT SY + C ++ A +L+ RM+ C PD
Sbjct: 331 LCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPD 390
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ-GMFDVAKKYM 364
YN V+ R GR +V E+M P++ +Y ++ G C + G + A KY
Sbjct: 391 RHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYF 450
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
++MI +G P+ + L +G +D
Sbjct: 451 EMMIDEGIPPYVTTVEMLRNRLLGLGFIDH 480
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 4/282 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+++F A + F + TY ILI G D+ + + PV + L+
Sbjct: 201 AQQLFHQAKNR--FSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLL 258
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ + D A F ML +P + + + ++ AF + ++ +
Sbjct: 259 QALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADD-VQSAFRVLDKMRRYNL 317
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
LPN +YN +++ C N + AY L ++M RGV PD SY + C +VNRA+
Sbjct: 318 LPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALR 377
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L+ M +PD +Y +L L R + + ++ M K P + Y+ ++ GFC
Sbjct: 378 LMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFC 437
Query: 318 -REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++G+ +ACK E M G P + + L L G D
Sbjct: 438 KKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFID 479
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 157 LEFNCKPLPKQL--NRILELLVTHRNYLRPAFDLFKSAHK-HGVLPNTKSYNIMMRAFCF 213
LE + P QL N + ++L +N A F A G + S++I++
Sbjct: 64 LELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGS 123
Query: 214 NGDISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
+I + +M E + E + ++ + + + + A+ M G P
Sbjct: 124 CKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIH 183
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
LL LC++K +++A +L + K + + Y+ ++ G+ G + AC + + M
Sbjct: 184 DLDKLLFILCKRKHVKQAQQLFHQAKNR-FSLTAKTYSILISGWGEIGDSEKACDLFQAM 242
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
GC +L++Y L+ LC G D AK M+SK P I +C+ V
Sbjct: 243 LEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDV 302
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
A VL+++ + P+ T+ I+ Q+C E +E+ ++L+E++ +K DT
Sbjct: 303 QSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDT 356
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 169/332 (50%), Gaps = 13/332 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ I+I L +A +K + P+ +TY LI + + + RA +
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKG--TVPNEWTYNVLINGFCKVHKVHRAYLLLK 66
Query: 155 SMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
M E P N + V H + + A+ LF+ ++G +PN +YN ++
Sbjct: 67 EMKESGLAP-----NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C NG + AY L ++M ERG+ PD SY LM GLC+ +++ A+ + ED N PD
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+TL+ LC+ +L EA KL +M+ C PD+V + ++ G C+ R +A +VLE
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M C PN+++Y +L+ GLC G A++ + MI +G P+ ++LI GFC
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
VD A ++EE+ G P T+ ++ +C
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLC 333
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 157/290 (54%), Gaps = 1/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ LI ++ D A K F M E +C+P +++ L + L+ A + ++
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG-DRLQEAQQVLETM 243
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
PN +Y+ ++ C G + A +F +M RG+ P+V +Y L+ G C + V
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A+ L+E+M G +PD ++Y TL++ LC+ + EA +L MK K CNPD++ Y+ +
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC+ R A + +DM LP++V++ TLV G C+ G+ D A++ ++ M++
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
SP +L+ GFC VG++ EA VL+ + K G P+ T+ ++ C
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 473
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 135/259 (52%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N L A F K G +PN +YN+++ FC + AY L +M E G+ P+V +Y
Sbjct: 21 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 80
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ G CR+++V+ A L M+ G +P+ ++Y TLL+ LCR + EAY+LL M+
Sbjct: 81 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 140
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD Y+T++ G C+ G+ A KV ED + C P++V+Y TL+ GLC G D
Sbjct: 141 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDE 200
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K + M P AL+ G C ++ EA VLE + P+ T+ ++
Sbjct: 201 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 260
Query: 420 QICAGEEMEKLGEVLNEIV 438
+C ++ EV ++
Sbjct: 261 GLCKTGQVRDAQEVFKRMI 279
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 169/355 (47%), Gaps = 38/355 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I + D A K FR M+E C P N +L L + + A
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN-GLMDEA 131
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS------------------IAYT----- 222
++L + G+ P+ SY+ +M C G I +AY+
Sbjct: 132 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 191
Query: 223 ------------LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
LF KM E PDV ++ LM GLC+ ++ A +LE M ++ P+
Sbjct: 192 LCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y++L++ LC+ ++R+A ++ RM V+G P++V YN+++ GFC A ++E
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + GCLP++++Y TL+ GLC G A + M +K +P LI GFC +
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++D A + +++LK P T+ +V C ++ +L E+V + D
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 426
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 132/235 (56%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N ++ IM+ C + A T F KM ++G +P+ +Y +L+ G C+ +V+RA LL
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++M G P+ ++Y+T+++ CR+ K+ AYKL +M GC P++V YNT++ G CR
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G +A ++L++M G P+ SY TL+ GLC G D+A K + + P
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
LI G C G++DEAC + E++ + P T+ ++ +C G+ +++ +VL
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 40/350 (11%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY LI + +N D AL M C P N +++ L A
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC-KTGRAPEA 341
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF P+ +Y+ ++ FC I +A TLF+ M ++ V+PDV ++ L++G
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C V+ A LLE+M+ PD +YT+L++ C+ ++ EA ++L RM +GC P+
Sbjct: 402 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 461
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL------------------ 347
+V Y ++ FCR G+ A K+LE+M NG PN+++YR+L
Sbjct: 462 VVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLE 521
Query: 348 ------------------VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ GLC G A + ++ + G P + ALI+G C
Sbjct: 522 RLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 581
Query: 390 GKVDEACGVLEEL-LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++ +A VLEE+ L P+ + + ++ ++ E+ + +E++
Sbjct: 582 KELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 46/263 (17%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
+L DD+L V P + T+ L++ Y + L D A + M+ +C P
Sbjct: 378 TLFDDML------KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+++ + A + K K G PN +Y ++ AFC G ++AY L +M
Sbjct: 432 SLVDGFC-KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG 490
Query: 230 RGVMP------------------------------------DVESYRILMQGLCRKSQVN 253
GV P D+ +YR++M GLCR +++
Sbjct: 491 NGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMS 550
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCNPDIVHYNTV 312
A++LLE + G P Y L+ LC+ K+L +A ++L M + + P+ Y V
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 610
Query: 313 VLGFCREGRAIDACKVLEDMPSN 335
+ REGR +A + +++ N
Sbjct: 611 IQELAREGRHEEANALADELLGN 633
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C +++ + ++ G C+ R +A M G +PN +Y L+ G C A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M G +P+ +I GFC KVD A + ++++ G P+ T+ ++ +
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 422 CAGEEMEKLGEVLNEI 437
C M++ E+L+E+
Sbjct: 123 CRNGLMDEAYELLDEM 138
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C N++++ ++ GLC A Y M KG P+ + LI GFC V KV A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+L+E+ ++G AP+ T+ ++ C +++ ++ ++V+
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 105
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 197/388 (50%), Gaps = 3/388 (0%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
SP P V ++ Q +PL A EIF+ ++ F+H+ TY +I KLG F +++
Sbjct: 2 SPALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEE 61
Query: 117 ILI-TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L T + + ++ ++ Y A+ F M FNC+P + N I+ +L
Sbjct: 62 VLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNIL 121
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
V +R Y A ++ G++P+ ++ I M++FC A L N M +G
Sbjct: 122 VEYR-YFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS 180
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y ++ G ++ A +L E+ML G PD +++ L+++LCRK ++E+ +LL
Sbjct: 181 AVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLN 240
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++ +G +P++ N + GFC+ +A ++L D G P++++Y TL+ GLC
Sbjct: 241 KVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNF 299
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A+ Y++ M+++G+ P +++I G+C +G + A +L + G P E T+
Sbjct: 300 KVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYC 359
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ +C ++++ V NE ++ +K
Sbjct: 360 SLINGLCQDGDIDRAINVFNEAMEKGLK 387
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 37/328 (11%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
S + LI + DRA+ F +E KP N +++ L + + + A L
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGL-SQQGLILQALKLMN 414
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
++G P+ +YN+++ C G +S A L +G +PDV ++ L+ G C+K
Sbjct: 415 EMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKL 474
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ A+++++ M N G PD ++Y ++LN LC+ K + M KGC P+I+ YN
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN 534
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD------------ 358
+ FC+ + +A ++E+M + G P++V++ TL+ G CD G D
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Query: 359 ------------------------VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+A+K M GFSP +I GFC G ++
Sbjct: 595 YKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINS 654
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQIC 422
L ++ G P T+ ++ +C
Sbjct: 655 GYSFLLVKIEKGLIPSLTTFGRVLNCLC 682
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 149/294 (50%), Gaps = 18/294 (6%)
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
YL K+ E PD T+ S+++ CK ++ A + +
Sbjct: 307 YLRKMVNEGYEPDGF--TYNSIIDGYCK----------------LGMMQNADQILRDGAF 348
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G +P+ +Y ++ C +GDI A +FN+ E+G+ P++ L++GL ++ + +
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ L+ +M G PD +Y ++N LC+ + +A L+ KG PD+ +NT++
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G+C++ + +A ++++ M ++G P++++Y +++ GLC G ++ +LM+ KG P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ + L + FC KV+EA ++EE+ G P + ++ C +++
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLD 582
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 139/272 (51%), Gaps = 10/272 (3%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
+V +YLR + G P+ +YN ++ +C G + A + +G +P
Sbjct: 301 VVEAEHYLRKMVN-------EGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVP 353
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D +Y L+ GLC+ ++RA+++ + + KG P+ + TL+ L ++ + +A KL+
Sbjct: 354 DESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLM 413
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M GC+PDI YN V+ G C+ G DA ++ D + G LP++ ++ TL+ G C +
Sbjct: 414 NEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKK 473
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
D A + + M + G SP ++++ G C GK ++ G + +++ G P+ T+
Sbjct: 474 LKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITY 533
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ C ++E E LN I +++ KG T
Sbjct: 534 NILTESFCKARKVE---EALNLIEEMQNKGLT 562
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 2/305 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ +I + E N A + F ML P N+++ L + +++ + L
Sbjct: 184 YCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTL-CRKGHVQESERLLNKV 242
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K GV PN + NI ++ FC ++ A L + + RG+ PDV +Y L+ GLC+ +V
Sbjct: 243 LKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKV 301
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L M+N+G+ PD +Y ++++ C+ ++ A ++L KG PD Y ++
Sbjct: 302 VEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C++G A V + G PNLV TLV GL QG+ A K M M G
Sbjct: 362 INGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGC 421
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP + +I G C +G V +A ++ + + G P T+ ++ C +++ E
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIE 481
Query: 433 VLNEI 437
+++ +
Sbjct: 482 IVDRM 486
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 19/275 (6%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+I A+ +LPD + TF ++++ CK L L A ++ H
Sbjct: 448 VIDAIAKGHLPD--VFTFNTLIDGYCKKLK----------------LDNAIEIVDRMWNH 489
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV P+ +YN ++ C G F M E+G +P++ +Y IL + C+ +V A
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVL 314
++L+E+M NKG PD +++ TL+ C L AY+L R+ + + I YN ++
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMIN 609
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
F + A K+ M NG P+ +YR ++ G C G + ++ + I KG P
Sbjct: 610 AFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIP 669
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ ++ C +V EA G++ ++ G P
Sbjct: 670 SLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 46/288 (15%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K L + I I + ++ V+P + TY ++ ++ + + TF+ M+E C P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N + E R + A +L + G+ P+ ++ +M+ FC NGD+ AY L
Sbjct: 529 NIITYNILTESFCKARK-VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQL 587
Query: 224 F------------------------------------NKMFERGVMPDVESYRILMQGLC 247
F NKM E G PD +YR+++ G C
Sbjct: 588 FKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFC 647
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +N L + KG +P ++ +LN LC K+++ EA ++ M KG P++V
Sbjct: 648 KTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707
Query: 308 HYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
NT+ F + + + A K V+E++ G + +Y L G+ D+
Sbjct: 708 --NTI---FEADKKEVAAPKIVVENLMKKGHIT-YFAYEILHDGIRDK 749
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 185/363 (50%), Gaps = 37/363 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP + K+ A+ DP L F A + +++ + + Y ++I +L + FS ++++L
Sbjct: 37 SPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLAR 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++E + + F LIK+Y +N P++A++T +M +NC P K N +L +LV R
Sbjct: 97 ARAERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKR 156
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y +++ SA + GV +T CFN
Sbjct: 157 QY-EVVHEVYLSASRLGVTLDT---------CCFN------------------------- 181
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL++GLC+ + A+ LL +M +G VP+ +Y+TL+N LC+ ++ +A++L RM+
Sbjct: 182 -ILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQK 240
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ D V YN ++ G CRE R +A + + M GC PN +Y+ L+ GL G F
Sbjct: 241 EDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVE 300
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK + +M ++ P FS LI G C+V +D+A VL+++++ G P TW +V
Sbjct: 301 AKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVT 360
Query: 420 QIC 422
+C
Sbjct: 361 SMC 363
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 10/211 (4%)
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVH 308
S RA D + + P+ Y+ +++ L ++ + +LL R + + D
Sbjct: 56 SSFKRACD------RRDYKPNEALYSMMIDRLASCRRFSDVEELLARARAERFRFSDEFF 109
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y + + A + L MP C P+ ++ ++ L + ++V +
Sbjct: 110 YRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSAS 169
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G + + L+KG C GK +A +L E+ K G P+ T+ ++ +C +++
Sbjct: 170 RLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVD 229
Query: 429 KLGEVLNEIVKVEIKGDT---RIVEAGIGLE 456
K E+ + K +I D I+ AG+ E
Sbjct: 230 KAFELCERMQKEDIVADAVVYNILIAGLCRE 260
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 185/363 (50%), Gaps = 37/363 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP + K+ A+ DP L F A + +++ + + Y ++I +L + FS ++++L
Sbjct: 37 SPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEVLAR 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++E + + F LIK+Y +N P +A++T +M +NC P K N +L +LV R
Sbjct: 97 ARAESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKR 156
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y +++ SA + GV +T CFN
Sbjct: 157 QY-EVVHEVYLSASRLGVTLDT---------CCFN------------------------- 181
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL++GLC+ + + A+ LL +M +G VP+ +Y+TL+N LC+ ++ +A++L RM+
Sbjct: 182 -ILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQK 240
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ D V YN ++ G CRE R +A + + M GC PN +Y+ L+ GL G F
Sbjct: 241 EDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVE 300
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK + +M ++ P FS LI G C+V +D+A VL+++++ G P TW +V
Sbjct: 301 AKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVT 360
Query: 420 QIC 422
+C
Sbjct: 361 SMC 363
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAI 323
+ + P+ Y+ +++ L ++ + ++L R + + D Y + +
Sbjct: 65 RDYKPNEALYSLMIDRLASCRRFSDVEEVLARARAESFRFSDEFFYRLIKMYGNVANHPQ 124
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A + L MP C P+ ++ ++ L + ++V + G + + L+
Sbjct: 125 KAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILV 184
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
KG C GK D+A +L E+ K G P+ T+ ++ +C +++K E+ + K +I
Sbjct: 185 KGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIA 244
Query: 444 GDTRI 448
D +
Sbjct: 245 ADAVV 249
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 174/348 (50%), Gaps = 5/348 (1%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
PN R N+ +IL L + + +++ P + LI A++ +
Sbjct: 148 PNRRSHNT----IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNE 203
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A K FR ML+ P N ++ + L A +LFKS G P+ ++NI++
Sbjct: 204 AYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT-LDEALELFKSMRSKGCRPSRFTFNILI 262
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A C G + A+ L +M + G +PDV +Y L+ GLC ++V+ A LLEDM+ +
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P ++ TL++ LC+ +++EA ++L M G +PD+V YNT+V G CR G+ A ++
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L DM + G PN+V+Y LV GLC A M S G +P+ ALI GFC+
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
G+VD + E++ AG +P + + ++C + E+L E
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 172/353 (48%), Gaps = 5/353 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ N + +Y ILI L +A + D+ L H VTPS Y LI +N
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLL--HSGVTPSTVAYTSLIHGLCMANS 60
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A + F M C P P N I++ R L A DL K + G +P+ +YN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDA-SCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+M C +G + A LFN+M G P+ S+ ++ GLC++S++++A + +M +
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD+ SY L++ L + KL EAYKL RM G P V YN V+ G C +A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ + M S GC P+ ++ L+ C +G D A + ++ M G P LI G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
C++ +VD+A +LE+++K P T ++ +C +++ EVL+ +V
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 168/319 (52%), Gaps = 2/319 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P S T ++ + +S + D+A + F M + P +++ L L A+
Sbjct: 148 PNRRSHNTIILGLCQQSKI-DQACQVFHEMEARDIPPDSWSYGILIDGL-AKAGKLNEAY 205
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF+ G+ P+ +YN+++ C + A LF M +G P ++ IL+
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++ A LL+ M + G VPD ++Y+TL++ LC ++ +A LL M + C P +
Sbjct: 266 CKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V NT++ G C+ GR +A +VL+ M S+G P++V+Y TLV G C G + A++ +
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+++G +P+ AL+ G C ++ EACGV ++ +G AP+ T+ ++ C+ +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 427 MEKLGEVLNEIVKVEIKGD 445
++ ++ E+V I D
Sbjct: 446 VDGGLKLFGEMVCAGISPD 464
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 167/383 (43%), Gaps = 73/383 (19%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V+P ++Y LI A++ + A F+ +L P ++ L N A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMA-NSFDDA 64
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF ++ G P+ +YN+++ A C G + A L KM E G +PDV +Y +M G
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 246 LCR-----------------------------------KSQVNRAVDLLEDMLNKGFVPD 270
LC+ +S++++A + +M + PD
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF-------------- 316
+ SY L++ L + KL EAYKL RM G P V YN V+ G
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244
Query: 317 ---------------------CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
C+ G+ +A ++L+ M +G +P++V+Y TL+ GLC
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A+ ++ M+ + P + LI G C G++ EA VL+ ++ +G++P T+
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 416 MIVPQICAGEEMEKLGEVLNEIV 438
+V C + E+ E+L+++V
Sbjct: 365 TLVHGHCRAGQTERARELLSDMV 387
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 144/350 (41%), Gaps = 75/350 (21%)
Query: 128 VTPSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TPS TY + I+ + D AL+ F+SM C+P N +++ R + A
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC-KRGKMDEA 274
Query: 186 FDLFKSAHKHGVLPNTKSY-----------------------------------NIMMRA 210
F L K G +P+ +Y N ++
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G I A + + M G PDV +Y L+ G CR Q RA +LL DM+ +G P+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++YT L++ LC+ +L EA + +MK GC P++ Y ++LGFC G+ K+
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 331 DMPSNGCLPNLVSYRTL-------------------------------------VGGLCD 353
+M G P+ V Y TL V GL D
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLD 514
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
G ++A +++ M+ G P +L+ G C G+ EA VLEE++
Sbjct: 515 AGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++ V P++ SY I++ G ++ A LF K+ GV P +Y L+ GLC +
Sbjct: 2 NERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 61
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L DM +G P ++Y ++++ C++ L EA L+ +M G PD+V YNTV
Sbjct: 62 DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ GR +A + +M GC PN S+ T++ GLC Q D A + M ++
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P LI G GK++EA + +L +G P T+ +++ +C
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMC 231
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 105/188 (55%), Gaps = 2/188 (1%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M ER V PD SY IL+ GL + ++N A DL + +L+ G P T++YT+L++ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+A +L M +GC P V YN ++ C+ G +AC +++ M +G +P++V+Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC G + A M G +P+ + +I G C K+D+AC V E ++A
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE-MEAR 179
Query: 407 EAPHEDTW 414
+ P D+W
Sbjct: 180 DIP-PDSW 186
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + PD+ SY L++ L + KL +A L ++ G P V Y +++ G C
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA ++ DM GC P+ V+Y ++ C +GM + A ++ MI G P +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
++ G C G+V+EA + E+ + G P+ + I+ +C ++++ +V +E+ +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 442 IKGDT 446
I D+
Sbjct: 181 IPPDS 185
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 192/402 (47%), Gaps = 3/402 (0%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFR 92
Y +S E P+ E + ++ P + L DP A +F + ++ FR
Sbjct: 21 YHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDL-KEIEDPEEALSLF-HQYQEMGFR 78
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H +Y LI KL +++ F +D IL ++ + SLF LI+ Y ++ D+A+
Sbjct: 79 HDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDV 138
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F + F+C + LN ++ +LV + L A F A + PN+ S+NI+++ F
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDN-GELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
D A +F++M E V P V +Y L+ LCR + +A LLEDM+ K P+ +
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV 257
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ L+ LC K + EA KL+ M+ +GC P +V+Y ++ + GR +A +L +M
Sbjct: 258 TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEM 317
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++V Y LV LC + A + + M KG P+ + +I GFC +
Sbjct: 318 KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
D VL +L + P T+V +V + G ++ VL
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G + SY+ ++ + + + + R V + L+Q
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ V++A+D+ + + V S TL+N L +L +A K P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V +N ++ GF + ACKV ++M P++V+Y +L+G LC AK +
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI K P+ L+KG C G+ +EA ++ ++ G P + +++ +
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+++ +L E+ K IK D I
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVI 328
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 173/373 (46%), Gaps = 39/373 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY-PVTPSLFTYL 136
A F +A R P F HS +Y IL+ LG +K F LI D L ++ + P +F +
Sbjct: 97 AHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLI 156
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ Y +NLP A++ F M +F K ++++L +L R +++ A + F +
Sbjct: 157 FRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCK-RKHVKQAQEFFDKVNVE- 214
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V+PN K+Y+I+MR + GD S A LF +M ERG DV +Y L++ LC+ V+ A
Sbjct: 215 VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAY 274
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L +M + G PD SY+ + + C + A+++L RM+ P++ YN +V
Sbjct: 275 KLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKL 334
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ---------------------- 354
C+ + +A ++L++M G P+L SY + CD
Sbjct: 335 CKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDR 394
Query: 355 -------------GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLE 400
G FD M +GF P S ++ GFC GK++EAC E
Sbjct: 395 HTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFE 454
Query: 401 ELLKAGEAPHEDT 413
++ G P+ T
Sbjct: 455 MMIDDGIPPYSCT 467
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++ RA+C A F++M + GV V L+ LC++ V +A + D +
Sbjct: 153 FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFF-DKV 211
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
N +P+ +Y+ L+ EA KL M+ +GC D+V YN+++ C+ G
Sbjct: 212 NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD 271
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A K+ +M SNG P+ SY + C+ A + + M P+ + ++
Sbjct: 272 EAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIV 331
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
K C KVDEA +L+E+++ G +P D W
Sbjct: 332 KKLCKSEKVDEAYQLLDEMIERGVSP--DLW 360
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 13/285 (4%)
Query: 78 AKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
A+E FD + + PN + TY IL+ G S + ++ V +
Sbjct: 204 AQEFFDKVNVEVMPNAK----TYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNS 259
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ + D A K FR M P + I N + AF + ++
Sbjct: 260 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYS-IFIRAYCEVNDIHSAFQVLDRMRRY 318
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
++PN +YN +++ C + + AY L ++M ERGV PD+ SY + C +VN+A
Sbjct: 319 NLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKA 378
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L+ M + +PD +Y +L L R + + M+ +G P Y +V G
Sbjct: 379 LRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHG 438
Query: 316 FC-REGRAIDACKVLEDMPSNG-----CLPNLVSYRTLVGGLCDQ 354
FC ++G+ +ACK E M +G C L+ R + G +Q
Sbjct: 439 FCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQ 483
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER---GVMPDVESYRILMQGLCRKSQV 252
G + +SY+I++ + + + + M E + P++ + ++ + CR +
Sbjct: 109 GFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEI--FWLIFRAYCRANLP 166
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ M + G LL LC++K +++A + ++ V+ P+ Y+ +
Sbjct: 167 GDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSIL 225
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ G + +A K+ E+M GC ++V+Y +L+ LC G D A K + M S G
Sbjct: 226 MRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGL 285
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+P I+ +C V + A VL+ + + P+ T+ IV ++C E++++ +
Sbjct: 286 APDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQ 345
Query: 433 VLNEIVKVEIKGD 445
+L+E+++ + D
Sbjct: 346 LLDEMIERGVSPD 358
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 189/406 (46%), Gaps = 20/406 (4%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS-----------LIDD 116
L+ QSD A F++ R S Y I++ L ++ FS L+ D
Sbjct: 107 LLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKD 166
Query: 117 IL--------ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L + L +E P +F L+K Y L++FR ML P
Sbjct: 167 DLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 226
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +L L+ NY +++++ + G+ PN ++NI+ C +GD KM
Sbjct: 227 NYLLNGLLK-LNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKME 285
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E G PD+ +Y L+ CRK +++ A L + M +G VPD +SYT L+N LC++ ++R
Sbjct: 286 EEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVR 345
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA++L RM +G +PDIV YNT++ G+C+EG+ ++ +L DM NG P+ + LV
Sbjct: 346 EAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLV 405
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G +G F A + + G S + LI C + A +LE + K G
Sbjct: 406 EGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHK 465
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
P + + ++ C + + + + E+V EIK + A IG
Sbjct: 466 PELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIG 511
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 3/332 (0%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + + P+L+T+ L + + + K M E P N ++ +
Sbjct: 250 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINS-YCRKGR 308
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF L+K ++ GV+P+ SY +M C G + A+ LF++M RG+ PD+ +Y
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ ++ + LL DM+ G PD+ + L+ ++ K A L+ ++ G
Sbjct: 369 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 428
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y+ +++ CRE R A +LE M +G P L Y L+ C A
Sbjct: 429 VSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEAL 488
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ K P+ + A+I + + E ++ E++ +G P + +
Sbjct: 489 LLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGY 548
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +++K +L+ K DT A I
Sbjct: 549 CRENDIDKAESLLSFFAKEFQIHDTESFNALI 580
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + GV + Y+ ++ A C A L +M + G P++E Y L++
Sbjct: 417 ALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIK 476
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C+ + A+ L +M++K P+ +Y ++ L R + E L+ M G P
Sbjct: 477 SFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLP 536
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ + G+CRE A +L + + S+ L+ +G + +
Sbjct: 537 DLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQ 596
Query: 365 QLMISKGFSPH 375
+M+ G P+
Sbjct: 597 DMMLKMGLLPN 607
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 201/411 (48%), Gaps = 41/411 (9%)
Query: 69 IASQSDPLLAKE--IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
+ S S L E IF AS+ +++ +ST+ LI + F + + +K E
Sbjct: 52 VVSVSRSFLQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERR 111
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA 185
F + + Y +++LP++A++ F M+ EF C+ + N +L +++ + R A
Sbjct: 112 VFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHR-A 170
Query: 186 FDLFKSA--HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
+ ++ K + PN S+N++++A C G + A +F +M + PDV +Y LM
Sbjct: 171 LEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLM 230
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC++ +++ AV LL++M +G P ++++ L+N LC+K + KL+ M +KGC
Sbjct: 231 DGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCV 290
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG-------- 355
P+ V YNT++ G C +G+ A +L+ M ++ C+PN V+Y TL+ GL QG
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 350
Query: 356 ----------------------MF-----DVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+F + A + M+ KG P+ V ALI G C
Sbjct: 351 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 410
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
GK+DEA +L E++ G P+ T+ ++ +K V E+ K
Sbjct: 411 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 461
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 38/365 (10%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ F +IK + L DRA++ FR M C+P +++ L + + A
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKE-DRIDEA 242
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G P++ ++N+++ C GD+ L + MF +G +P+ +Y ++ G
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 302
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK--------------------- 284
LC K ++++AV LL+ M+ VP+ ++Y TL+N L ++
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362
Query: 285 --------------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+K EA L +M KGC P+IV Y+ ++ G CREG+ +A ++L
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + GC PN +Y +L+ G G A + + M P+ LI G C G
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
K+ EA + +L G P + ++ +C +E ++ NE++ E +V
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542
Query: 451 AGIGL 455
I L
Sbjct: 543 YNILL 547
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 40/348 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY L+ + + D A+ M C P N ++ L + +R
Sbjct: 221 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVT-K 279
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF------------------- 228
L + G +PN +YN ++ C G + A +L ++M
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339
Query: 229 ----------------ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
ERG + +Y L+ GL ++ + A+ L + M+ KG P+ +
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y+ L++ LCR+ KL EA ++LC M KGC P+ Y++++ GF + G + A +V ++M
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
N C+PN + Y L+ GLC+ G A M+ +G P ++I G CN G V
Sbjct: 460 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 519
Query: 393 DEACGVLEELL--KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ + E+L ++ P T+ +++ +C + ++LN ++
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 567
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN Y LI L R +IL + ++ TP+ FTY LIK + ++
Sbjct: 395 QPNI----VVYSALIDGLCREGKLDEAKEILCEMVNKG--CTPNAFTYSSLIKGFFKTGN 448
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNT 201
+A++ ++ M + NC P N I ++ H LR A ++ G+ P+
Sbjct: 449 SQKAIRVWKEMAKNNCVP-----NEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 503
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMF--ERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+Y+ M+ C G + + LFN+M E PDV +Y IL++ LC+++ ++ A+DLL
Sbjct: 504 VAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLL 563
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
ML++G PD ++ LN+L R K+ + +V+ +
Sbjct: 564 NSMLDRGCNPDLITCNIFLNAL--------------REKLNPPQDGREFLDELVVRLHKR 609
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
R + A K++E M PN ++ ++ LC K +Q +I K +S F
Sbjct: 610 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELC-------KPKKVQAIIDKCWSSLF 659
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 168/307 (54%), Gaps = 2/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI YA+ D A + + M+ +P N +L ++ A +LFK+
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETK-MKEAMELFKTM 104
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAY-TLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G P+ +Y+ ++ C G ++ A LF+KM ERG + +Y L+ GLC+
Sbjct: 105 AEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDEN 164
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ RA LLE+M +KG+VPD ++Y T+L+ LCR K+ EA + M +G +PD+V YN
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ +EG+ +A K+ +D+ + G +P+ V+Y +++ GL + D A++ + M++ G
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+P+ + ++ G C KVD+A VLEE+ K G P T+ +++ +C ++K
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344
Query: 432 EVLNEIV 438
E+ + +V
Sbjct: 345 ELFSTMV 351
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 149/286 (52%), Gaps = 1/286 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F M+E C N ++ L N R A+ L + G +P+ +YN ++ C
Sbjct: 137 FHKMIERGCSANTVAYNALINGLCKDENIER-AYKLLEEMASKGYVPDNITYNTILSGLC 195
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G +S A F+ M RG PDV +Y L+ L ++ + + A+ L +D++ KG++PDT+
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L L RK + EA ++ +M GC P+ Y+ V+ G CR + DA KVLE+M
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G +P++V+Y L+ GLC + D A + M+ G +P ++ G C KV
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+A + + +++ P T+ +++ +C ++++ ++L+++
Sbjct: 376 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 144/258 (55%), Gaps = 1/258 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LR + LF+ +G+ P+ YNI++ + G + A L+ +M G+ P + +Y
Sbjct: 24 LRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNS 83
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC-RMKVK 300
L+ C+++++ A++L + M KGF PD ++Y+T+++ LC+ K+ EA ++L +M +
Sbjct: 84 LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC+ + V YN ++ G C++ A K+LE+M S G +P+ ++Y T++ GLC G A
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K++ M S+G+SP + L+ GK DEA + ++++ G P T+ I+
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263
Query: 421 ICAGEEMEKLGEVLNEIV 438
+ M++ E+ ++V
Sbjct: 264 LARKSNMDEAEEMFKKMV 281
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 1/212 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN ++ +++++FC G + Y LF +M + G+ PD Y IL+ G +K +V+ A L
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M++ G P +Y +LLN+ C++ K++EA +L M KG PD+V Y+T++ G C+
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 319 EGRAIDACKVL-EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
G+ +A ++L M GC N V+Y L+ GLC + A K ++ M SKG+ P
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ ++ G C +GKV EA + + G +P
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 145/282 (51%), Gaps = 7/282 (2%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY---LIKIYAESNLPDRAL 150
N TY ++ L R S ++ S Y +P + Y L +Y E D A+
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY--SPDVVAYNGLLDALYKEGK-TDEAM 239
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K F+ ++ P N IL L + ++ + A ++FK G PN +Y+I++
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSIL-LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C + A+ + +M + G +PDV +Y IL+ GLC+ + V++A +L M++ G PD
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+SY+ +LN LC+ K+ +A L RM + PD+V +N ++ G C+ G+ +A +L+
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
M +GC P+ V+Y TL+ GL QG A + Q M KGF
Sbjct: 419 QMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK G +P+T +YN ++ ++ A +F KM G P+ +Y I++
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLS 297
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR +V+ A +LE+M G VPD ++Y LL+ LC+ + +A++L M GC P
Sbjct: 298 GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV Y+ V+ G C+ + DA + + M +P++V++ L+ GLC G D AK +
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGK 391
M G +P + + L+ G G+
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGR 444
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%), Gaps = 2/216 (0%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P T + + L+ + +SN+ D A + F+ M+ C P + +L + +
Sbjct: 250 YMPDTVTYNSILLGLARKSNM-DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK-VDD 307
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + K G +P+ +YNI++ C + A+ LF+ M + G PD+ SY +++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++V+ A L + M+ + VPD +++ L++ LC+ KL EA LL +M GC P
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
D V YNT++ G ++GR I A ++ + M G L +
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 6/237 (2%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
R P+ ++R++++ C++ ++ L E ML+ G PD + Y L++ +K ++ E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A +L M G P I YN+++ FC+E + +A ++ + M G P++V+Y T++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 350 GLCDQGMFDVAKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC G A + + MI +G S + +ALI G C ++ A +LEE+ G
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED--YLIGKT 463
P T+ I+ +C M K+ E + +G + V A GL D Y GKT
Sbjct: 182 PDNITYNTILSGLC---RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++ C+P+ + V+ FC++G+ D K+ E M NG P+ + Y L+ G +G D
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M+S G P ++L+ FC K+ EA + + + + G P T+ I+
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120
Query: 419 PQIC-AGEEMEKLGEVLNEIVK 439
+C G+ E L + +++++
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIE 142
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRAL 150
+ +TY I++ RAK +DD L+ P + TY L+ ++NL D+A
Sbjct: 288 NGATYSIVLSGHCRAKK---VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ F +M++ C P + +L L N + A LF + ++P+ ++NI+M
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLC-KTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 403
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G + A L ++M G PD +Y LM GL ++ + +A L + M KGF+ D
Sbjct: 404 LCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 167/311 (53%), Gaps = 3/311 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P Y +I + N D AL+ + M E P N +++ L + A
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK-AS 281
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ GV P+T ++N +M C G A++L M ER P +Y L+ GL
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ V+RA DL+++ ++ GFVPD ++Y+ L + LC++ ++ EA++L+ M KGC P++
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNL 401
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ G C+ + A ++LE + S+G +P++V+Y +V GLC +G D A K ++
Sbjct: 402 VTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEG 461
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ +G +P AL++G C G+VDEA + +E++ +V +V C
Sbjct: 462 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 521
Query: 427 MEKLGEVLNEI 437
++ +V++ I
Sbjct: 522 TKEAQKVVDGI 532
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 190/383 (49%), Gaps = 16/383 (4%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNST---YLILILKLGRAKYFSLIDDIL 118
P V +++ DP A F +A + F+HS T +L +L+ G + + + +
Sbjct: 93 PAVVSRVLQRLKDPQTAIVFFVWAGDR-GFKHSTFTRNCFLQTLLENGSSDRIPAMFERM 151
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ P +TY +IK + N D+A KP + IL
Sbjct: 152 L-----DAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKP-EVSVYTILTRAF 205
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
L+ A ++F++ P+ +YN ++ C D A +M ER V PDV
Sbjct: 206 CKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDV 261
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y IL+ GLC+ S+ ++A ++L +M+++G PDT+++ ++++ LC+ K A+ LL
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 321
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M + C P YNT++ G C++ A ++++ S+G +P++V+Y L GLC +G
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGR 381
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A + ++ M KG +P+ + LI G C K ++A +LE L+ +G P T+ +
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTI 441
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
IV +C ++K +++ ++K
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLK 464
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 174/360 (48%), Gaps = 8/360 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ N R S TY LI L + + D++ S + P + TY L +
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF--VPDVVTYSILADGLCKRGR 381
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A + + M C P N +++ L + A++L +S G +P+ +Y
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLC-KASKTEKAYELLESLVSSGFVPDVVTYT 440
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ C G + A + M +RG P V +Y LM+GLCR +V+ A + ++M++K
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
D L+Y +L+N C+ + +EA K++ ++G P I YN ++ G+C+EGR +
Sbjct: 501 DCTADALAYVSLVNGYCKSSRTKEAQKVV--DGIRG-TPYIDVYNALMDGYCKEGRLDEI 557
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
V EDM GC+PN+ +Y ++ GLC G D A +++ M S G P + +I G
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
K EA VL+++++AG P T+ ++ Q C E + +L ++K + D
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 133/256 (51%), Gaps = 4/256 (1%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F+ G +PN K+YNI+M C +G + A+ M G +PDV SY I++ GL
Sbjct: 559 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 618
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ S+ A +L+ M+ G PD ++Y TL+ C++++ +A +L M G +PD
Sbjct: 619 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 678
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN-LVSYRTLVGGLCDQGMFDVAKKYMQ 365
V YNT++ G + R DA +++ +M NGC+ + +Y T++ LC +G A M
Sbjct: 679 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 738
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G + + I C G++DEA +L E+ E ++ ++ +C E
Sbjct: 739 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAE 795
Query: 426 EMEKLGEVLNEIVKVE 441
++++ ++ E+V V+
Sbjct: 796 QLDRASKLAREMVAVK 811
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 157/391 (40%), Gaps = 78/391 (19%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + Y L+ Y + D F M C P K N +++ L H + AF
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH-GKVDEAF 593
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+S H G +P+ SYNI++ A + ++M + G+ PD +Y LM
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 653
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---- 302
C++ + + AV +L++M+ G PD ++Y TL++ L + +L +AY+L+ M GC
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 713
Query: 303 --------------------------------NPDIVHYNTVVLGFCREGRAIDACKVLE 330
+ V YN + C+EGR +A +L
Sbjct: 714 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 773
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY--------------------------- 363
+M + L + VSY T++ GLC D A K
Sbjct: 774 EMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 830
Query: 364 ---------MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ LM+ +G SP + +I C + KVD+A + +E+ G ++
Sbjct: 831 KRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 890
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++ +C ++ +VL E+ + + D
Sbjct: 891 TVLIYGLCGQGRGKEALQVLEEMASSDCEID 921
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 141/302 (46%), Gaps = 13/302 (4%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPS 131
S P A+++ D Q TY L+ + + + F DD + LK+ V P
Sbjct: 622 SKPKEARQVLDQMI-QAGIPPDAVTYNTLMAQFCKEERF---DDAVGILKNMIKAGVDPD 677
Query: 132 LFTY--LIKIYAESNLPDRALKTFRSMLEFNCK-PLPKQLNRILELLVTHRNYLRPAFDL 188
TY LI +++N A + ML C N I++ L L+ A L
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC-KEGCLKQALLL 736
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
HGV NT +YNI + C G + A +L ++M + D SY ++ GLC+
Sbjct: 737 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCK 793
Query: 249 KSQVNRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
Q++RA L +M+ KG + ++ L+++ + K+L EA LL M +GC+P ++
Sbjct: 794 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVI 853
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN V+ C+ + A ++ ++M G + + VSY L+ GLC QG A + ++ M
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Query: 368 IS 369
S
Sbjct: 914 AS 915
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 8/297 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY L+ + + D A+ ++M++ P N ++ L + N L A
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL-SQTNRLGDA 697
Query: 186 FDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
++L ++G V+ +YN ++ C G + A L + M GV + +Y I +
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 757
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCN 303
LC++ +++ A LL +M + D +SYTT++ LC+ ++L A KL M VKG
Sbjct: 758 RLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 814
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+N ++ F + R +A +L M GC P++++Y ++ LC D A +
Sbjct: 815 ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 874
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
M +G LI G C G+ EA VLEE+ + + W + P
Sbjct: 875 FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAPH 931
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 97 TYLILILKL---GRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
TY I I +L GR S + + TL+ E S T +I + L DRA K
Sbjct: 751 TYNIFIDRLCKEGRLDEASSLLSEMDTLRDE-----VSYTTVIIGLCKAEQL-DRASKLA 804
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R M+ + +L T L A L + G P+ +YN+++ C
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A+ LF++M RG++ SY +L+ GLC + + A+ +LE+M + D L
Sbjct: 865 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLK 924
Query: 274 Y 274
+
Sbjct: 925 W 925
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 207/419 (49%), Gaps = 30/419 (7%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFD 83
P S F +SS S S+P+ Q E SIS +IF
Sbjct: 19 PARLSPFFYFSSLPLSSNSTPDAQNELSIS-------------------------PQIFK 53
Query: 84 YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAES 143
+ +++ ++T+ LI ++ F I +L +K E +T ++F + K ++
Sbjct: 54 SRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKA 113
Query: 144 NLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLP 199
+LP A+ F M + +CK K N +L +++ ++ AF + A+ G P
Sbjct: 114 HLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDF-SYAFKFYLHVFGANSKGFQP 172
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N +YN++++A C G I A F +M + PDV +Y LM GLC++ +V+ AV LL
Sbjct: 173 NLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLL 232
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++M +G +P+ +++ L+++L + L A KL+ M +KGC P+ V YNT++ G C +
Sbjct: 233 DEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 292
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ A +LE M S+ C+PN V+Y T++ GL Q + + M +G + +
Sbjct: 293 GKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIY 352
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+LI G GK + A + +E+ + G P+ + + +C E+ ++ ++L E++
Sbjct: 353 SSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 411
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 152/276 (55%), Gaps = 3/276 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L TY +IK + DRA+ TFR M NC P + ++ L R F
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF- 230
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G LPN ++N+++ A NGD+S A L + MF +G +P+ +Y L+ GLC
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 290
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
K ++++A+ LLE M++ VP+ ++Y T++N L ++++ + +L M+ +G +
Sbjct: 291 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 350
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G +EG++ +A ++ ++M GC PN+V Y + GLC D A+ +Q M
Sbjct: 351 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+SKGF P+ +L+KGF G +A V +E++
Sbjct: 411 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM 446
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 38/265 (14%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+AL M+ C P I+ LV R + S + G N Y+
Sbjct: 296 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRR-AEDGVHILMSMEERGQKANEYIYSS 354
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ G A L+ +M E+G P+V Y + GLCR + + A D+L++ML+KG
Sbjct: 355 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414
Query: 267 FVPDTLSYTTL-----------------------------------LNSLCRKKKLREAY 291
F+P+ +Y++L LN LC +LREA
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 474
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN--GCLPNLVSYRTLVG 349
+ M +G PD+V Y++++ G C G K+ +M P++V+Y L
Sbjct: 475 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 534
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSP 374
LC Q A + M+ +G P
Sbjct: 535 ALCRQDNLTRAIDLLNSMLDEGCDP 559
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
IL++++ +++ LI + + A++ ++ M E CKP ++ L
Sbjct: 336 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 395
Query: 177 THRNYLRP--AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
+P A D+ + G LPN +Y+ +M+ F GD A ++ +M + +
Sbjct: 396 RDE---KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH 452
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V +L+ GLC ++ A+ + ML +G PD ++Y++++ LC + + KL
Sbjct: 453 NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 512
Query: 295 CRMKVK--GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
M+ + PD+V YN + CR+ A +L M GC P+
Sbjct: 513 YEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 560
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
+DIL + S+ + P+ FTY L+K + + +A+ ++ M+ + + + +L
Sbjct: 404 EDILQEMLSKGF--LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 461
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF--ER 230
L LR A ++ G+ P+ +Y+ M++ C G + LF +M E
Sbjct: 462 NGLC-ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 520
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PDV +Y IL LCR+ + RA+DLL ML++G PD+L+ L +L
Sbjct: 521 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL--------- 571
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
R ++ + + +V+ + R + A +++E+M
Sbjct: 572 -----RERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEM 608
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL------------ 246
P+ +YNI+ A C +++ A L N M + G PD + I ++ L
Sbjct: 524 PDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRL 583
Query: 247 ---------CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
++ + A+ ++E+ML + P+ +++ ++ C+ K++RE CR
Sbjct: 584 FLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDECCR 642
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 5/348 (1%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
PN R N+ +IL L + + ++++ P + LI A++ +
Sbjct: 148 PNRRSHNT----IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNE 203
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A K F+ ML+ P N ++ + L A +LFKS G P+ ++NI++
Sbjct: 204 AYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT-LDEALELFKSMRSKGCRPSRFTFNILI 262
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A C G + A+ L +M + G +PDV +Y L+ GLC ++V+ A LLEDM+ +
Sbjct: 263 DAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P ++ TL++ LC+ +++EA ++L M G +PD+V YNT+V G CR G+ A ++
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L DM + G PN+V+Y LV GLC A M S G +P+ ALI GFC+
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
G+VD + E++ AG +P + + ++C + E+L E
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 5/353 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ N + +Y ILI G AK L D + K H VTPS Y LI +N
Sbjct: 3 ERNVSPDSWSYGILID--GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A + F M C P P N +++ R L A DL K + G +P+ +YN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDA-SCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+M C + + A LFN+M G P+ S+ ++ GLC++S++++A + +M K
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD+ SY L++ L + KL EAYKL RM G P V YN V+ G C +A
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ + M S GC P+ ++ L+ C +G D A + ++ M G P LI G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
C++ +VD+A +LE+++K P T ++ +C +++ EVL+ +V
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 168/319 (52%), Gaps = 2/319 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P S T ++ + +S + D+A + F M + P +++ L L A+
Sbjct: 148 PNRRSHNTIILGLCQQSKI-DQACQVFHEMEAKDIPPDSWSYGILIDGL-AKAGKLNEAY 205
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF+ G+ P+ +YN+++ C + A LF M +G P ++ IL+
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++ A LL+ M + G VPD ++Y+TL++ LC ++ +A LL M + C P +
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V NT++ G C+ GR +A +VL+ M S+G P++V+Y TLV G C G + A++ +
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+++G +P+ AL+ G C ++ EACGV ++ +G AP+ T+ ++ C+ +
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445
Query: 427 MEKLGEVLNEIVKVEIKGD 445
++ ++ E+V I D
Sbjct: 446 VDGGLKLFGEMVCAGISPD 464
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V+P ++Y LI A++ + A F+ +L P ++ L N A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMA-NSFDDA 64
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF ++ G P+ +YN+M+ A C G + A L KM E G +PDV +Y +M G
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ S+V A+ L +M G P+ S+ T++ LC++ K+ +A ++ M+ K PD
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y ++ G + G+ +A K+ + M +G P+ V+Y ++ G+C D A + +
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M SKG P + LI C GK+DEA +L+ + G P T+ ++ +C+
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304
Query: 426 EMEKLGEVLNEIVKVEIK 443
++ +L ++VK + K
Sbjct: 305 RVDDARHLLEDMVKRQCK 322
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 144/350 (41%), Gaps = 75/350 (21%)
Query: 128 VTPSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TPS TY + I+ + D AL+ F+SM C+P N +++ R L A
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC-KRGKLDEA 274
Query: 186 FDLFKSAHKHGVLPNTKSY-----------------------------------NIMMRA 210
F L K G +P+ +Y N ++
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G I A + + M G PDV +Y L+ G CR Q RA +LL DM+ +G P+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++YT L++ LC+ +L EA + +MK GC P++ Y ++LGFC G+ K+
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454
Query: 331 DMPSNGCLPNLVSYRTL-------------------------------------VGGLCD 353
+M G P+ V Y TL V GL +
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLE 514
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
G ++A +++ M+ G P +L+ G C G+ EA VLEE++
Sbjct: 515 AGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++ V P++ SY I++ G ++ A LF K+ GV P +Y L+ GLC +
Sbjct: 2 NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 61
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L DM +G P ++Y ++++ C++ L EA L+ +M G PD+V YNTV
Sbjct: 62 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ R +A + +M GC PN S+ T++ GLC Q D A + M +K
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P LI G GK++EA + + +L +G P T+ +++ +C
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMC 231
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M ER V PD SY IL+ GL + ++N A +L + +L+ G P T++YT+L++ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+A +L M +GC P V YN ++ C+ G +AC +++ M +G +P++V+Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC + A M G +P+ + +I G C K+D+AC V E ++A
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE-MEAK 179
Query: 407 EAPHEDTW 414
+ P D+W
Sbjct: 180 DIP-PDSW 186
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + PD+ SY L++ L + KL +A L ++ G P V Y +++ G C
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA ++ DM GC P+ V+Y ++ C +GM + A ++ MI G P +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
++ G C +V+EA + E+ + G P+ + I+ +C ++++ +V +E+ +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 442 IKGDT 446
I D+
Sbjct: 181 IPPDS 185
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 207/419 (49%), Gaps = 30/419 (7%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFD 83
P S F +SS S S+P+ Q E SIS +IF
Sbjct: 43 PARLSPFFYFSSLPLSSNSTPDAQNELSIS-------------------------PQIFK 77
Query: 84 YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAES 143
+ +++ ++T+ LI ++ F I +L +K E +T ++F + K ++
Sbjct: 78 SRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKA 137
Query: 144 NLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLP 199
+LP A+ F M + +CK K N +L +++ ++ AF + A+ G P
Sbjct: 138 HLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDF-SYAFKFYLHVFGANSKGFQP 196
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N +YN++++A C G I A F +M + PDV +Y LM GLC++ +V+ AV LL
Sbjct: 197 NLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLL 256
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++M +G +P+ +++ L+++L + L A KL+ M +KGC P+ V YNT++ G C +
Sbjct: 257 DEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 316
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ A +LE M S+ C+PN V+Y T++ GL Q + + M +G + +
Sbjct: 317 GKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIY 376
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+LI G GK + A + +E+ + G P+ + + +C E+ ++ ++L E++
Sbjct: 377 SSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEML 435
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 152/276 (55%), Gaps = 3/276 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L TY +IK + DRA+ TFR M NC P + ++ L R F
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF- 254
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G LPN ++N+++ A NGD+S A L + MF +G +P+ +Y L+ GLC
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 314
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
K ++++A+ LLE M++ VP+ ++Y T++N L ++++ + +L M+ +G +
Sbjct: 315 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 374
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G +EG++ +A ++ ++M GC PN+V Y + GLC D A+ +Q M
Sbjct: 375 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+SKGF P+ +L+KGF G +A V +E++
Sbjct: 435 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM 470
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 38/265 (14%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+AL M+ C P I+ LV R + S + G N Y+
Sbjct: 320 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA-EDGVHILMSMEERGQKANEYIYSS 378
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ G A L+ +M E+G P+V Y + GLCR + + A D+L++ML+KG
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438
Query: 267 FVPDTLSYTTL-----------------------------------LNSLCRKKKLREAY 291
F+P+ +Y++L LN LC +LREA
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREAL 498
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN--GCLPNLVSYRTLVG 349
+ M +G PD+V Y++++ G C G K+ +M P++V+Y L
Sbjct: 499 TVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFN 558
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSP 374
LC Q A + M+ +G P
Sbjct: 559 ALCRQDNLTRAIDLLNSMLDEGCDP 583
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
IL++++ +++ LI + + A++ ++ M E CKP ++ L
Sbjct: 360 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 419
Query: 177 THRNYLRP--AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
+P A D+ + G LPN +Y+ +M+ F GD A ++ +M + +
Sbjct: 420 RDE---KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH 476
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V +L+ GLC ++ A+ + ML +G PD ++Y++++ LC + + KL
Sbjct: 477 NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 536
Query: 295 CRMKVK--GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
M+ + PD+V YN + CR+ A +L M GC P+
Sbjct: 537 YEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD 584
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
+DIL + S+ + P+ FTY L+K + + +A+ ++ M+ + + + +L
Sbjct: 428 EDILQEMLSKGF--LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 485
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF--ER 230
L LR A ++ G+ P+ +Y+ M++ C G + LF +M E
Sbjct: 486 NGLC-ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 544
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PDV +Y IL LCR+ + RA+DLL ML++G PD+L+ L +L
Sbjct: 545 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL--------- 595
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
R ++ + + +V+ + R + A +++E+M
Sbjct: 596 -----RERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEM 632
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL------------ 246
P+ +YNI+ A C +++ A L N M + G PD + I ++ L
Sbjct: 548 PDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRL 607
Query: 247 ---------CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
++ + A+ ++E+ML + P+ +++ ++ C+ K++RE CR
Sbjct: 608 FLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDECCR 666
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 198/432 (45%), Gaps = 55/432 (12%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILIT--- 120
L+ SQ D L + D+A Q F + IL R K + SL +++++
Sbjct: 54 LLKSQFDSSLVLKFLDWARSQQFFSFQCKCLALHILT--RYKLYKTAQSLAEEVVVNTVD 111
Query: 121 ---------LKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
LK+ +Y S +F ++K A NL ++AL + P N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
IL+ ++ + ++ A +FK + GV PN +YNI++R FC G++ + F +M
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER 231
Query: 230 RGVMPDVE-----------------------------------SYRILMQGLCRKSQVNR 254
G +P+V SY +++ GLCR+ Q+
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKE 291
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
++LE+M + +VPD +++ TL+N C +A L M G +P++V Y T++
Sbjct: 292 TSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLIN 351
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ G A + L+ M G PN +Y TL+ G QG A + M+ M+ GF+P
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ALI G C +G++++A G+L+E+++ G P ++ I+ C +E+EK ++
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471
Query: 435 NEIVKVEIKGDT 446
E+V I D
Sbjct: 472 VEMVAKGISPDV 483
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 193/382 (50%), Gaps = 27/382 (7%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + +A + + L ++ +T LI +++ +A + + M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 157 LEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+E P N ++ + R + A L + + G +P+ SY+ ++ FC N
Sbjct: 405 VENGFTPTIITYNALINGHCILGR--MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A+ L +M +G+ PDV +Y L+QGLC++ ++ DL ++ML+ G PD ++YT
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L+N+ C + L +A +L M KG +PDIV YN ++ GF ++ R +A ++L +
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582
Query: 336 GCLPNLVSYRTLVG---------------GLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+PN ++Y TL+ G C +G+ + A + ++ M+ KG+ + V +
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVK 439
+I G VG +++A + +E+L +G APH T + + + G+E+E LN+++
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE-----LNQLLD 697
Query: 440 VEIKGDTRIVEAGIGLEDYLIG 461
+K RI EA L LIG
Sbjct: 698 YTLK-SCRITEA--ALAKVLIG 716
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 38/349 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V+P+++TY LI+ + + + L F M C P N I++ R + A
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK-IGEA 257
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFC--------------------------FN----- 214
F L + G+ PN SYN+++ C FN
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317
Query: 215 ----GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G+ A L +M + G+ P+V +Y L+ +C+ +NRA++ L+ M ++G P+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YTTL++ ++ L++AY+++ M G P I+ YN ++ G C GR DA +L+
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G +P++VSY T++ G C + A + M++KG SP + +LI+G C
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ E C + +E+L G P E T+ ++ C +++K + +E+++
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++I L R +IL + Y F LI Y +AL M
Sbjct: 275 SYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM 334
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ P ++ + N L A + G+ PN ++Y ++ F G
Sbjct: 335 VKNGLSPNVVTYTTLINSMCKAGN-LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ AY + +M E G P + +Y L+ G C ++ A LL++M+ +GF+PD +SY+T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ CR ++L +A++L M KG +PD+ Y++++ G C++ R + C + ++M S G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ V+Y +L+ C +G D A + MI KGFSP + LI GF + EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 397 GVLEELLKAGEAPHEDTWVMIV 418
+L +LL P+E T+ ++
Sbjct: 574 RLLLKLLYEESVPNEITYNTLI 595
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 18/260 (6%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY LI L + + + D+ + S P +T LI Y D+AL+
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM-------- 207
M++ P N ++ L K ++ V PN +YN +
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLE 602
Query: 208 -------MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
M+ FC G ++ A + M ++G + E Y +++ G + + +A +L +
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF-CRE 319
+ML+ GF P +++ L SL + K E +LL +K C V++G +E
Sbjct: 663 EMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL-DYTLKSCRITEAALAKVLIGINSKE 721
Query: 320 GRAIDACKVLEDMPSNGCLP 339
G VL+DM +G LP
Sbjct: 722 GNMDAVFNVLKDMALSGLLP 741
>gi|242095134|ref|XP_002438057.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
gi|241916280|gb|EER89424.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
Length = 499
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 170/336 (50%), Gaps = 7/336 (2%)
Query: 112 SLIDDILITLKSEHYPVTP----SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
++D++L L+ P ++ LIK + + A K M E+ C +
Sbjct: 163 GVLDELLSDLRDPRNKYLPRPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPN 222
Query: 168 LNRILELL--VTHRNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
L L+ + + AF+LF+ K ++P+ YN+++ FC G + A +F
Sbjct: 223 LVTYSTLIAGLCRGGKMMEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIF 282
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
M + P+ +Y L+ G C+K+ + A + E+M N G PD +SYT L+ LCR
Sbjct: 283 GFMKKNDCEPNAFNYATLINGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRH 342
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
+ EA L+ MK KGC D+V YN V+ G CR+GR ++A +LE +P G N+ SY
Sbjct: 343 GSVDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVASY 402
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
R L+ LC +G D A + LM+ +GF PH++ S+ L+ G C+ G++ +A L L
Sbjct: 403 RILMNCLCSRGEMDKAVGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADATMALYGLAD 462
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
AG P W +V +C + + E+L+ +V V
Sbjct: 463 AGFMPEARCWERLVETMCRERKQRRSTELLDVLVGV 498
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 180/375 (48%), Gaps = 14/375 (3%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
+ +LIAS A ++F+ AS Q F H+ +T+ L+++L RA+ +L SE
Sbjct: 47 LARLIASSPSAQRALDLFNAASSQRGFSHTPATFSALLVRLARARLPRAAAAVLRRTASE 106
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF------NCKPLPKQLNRILELLVTH 178
F L+++ PD AL R + + K L L+R++ H
Sbjct: 107 PCRFQEPQFLPLVRLLP----PDHALALLRFLPALLRTSRVSHKALAVCLDRLVSSRGCH 162
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---RGVMPD 235
DL +K+ PNT YNI+++ F G++ A+ + ++M E V P+
Sbjct: 163 GVLDELLSDLRDPRNKYLPRPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPN 222
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ +Y L+ GLCR ++ A +L E+M+ K VPD L Y +++ CR ++ +A +
Sbjct: 223 LVTYSTLIAGLCRGGKMMEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIF 282
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
MK C P+ +Y T++ G C++ A V E+M + G P+ VSY L+G LC
Sbjct: 283 GFMKKNDCEPNAFNYATLINGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRH 342
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D A + M KG + +I+G C G+ EA +LE + G + ++
Sbjct: 343 GSVDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESVPLEGVKLNVASY 402
Query: 415 VMIVPQICAGEEMEK 429
+++ +C+ EM+K
Sbjct: 403 RILMNCLCSRGEMDK 417
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---NPDIVHYNTVVLGFCREGRAIDA 325
P+T Y L+ R +L A+K+L M+ C P++V Y+T++ G CR G+ ++A
Sbjct: 183 PNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMMEA 242
Query: 326 CKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
++ E+M + +P+ + Y ++ G C G D A+ M P+ LI
Sbjct: 243 FELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLIN 302
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C ++ A V EE+ AG P ++ ++ +C ++ E +N +++++ KG
Sbjct: 303 GHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVD---EAINLVLEMKQKG 359
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL---PNLVSYRTLVGGLCDQGMFDVA 360
P+ YN ++ F R G A KVL++M C PNLV+Y TL+ GLC G A
Sbjct: 183 PNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMMEA 242
Query: 361 KKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+ + MI K P + + +I GFC +G+VD+A + + K P+ + ++
Sbjct: 243 FELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLIN 302
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
C ++E V E+ ++ D A IG
Sbjct: 303 GHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIG 337
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 49/438 (11%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPN---FRHSNSTYLILILKLGRAKYFSLIDDI 117
S R+ L+ Q DP LA +F + + PN FR+S Y ++I KLGRAK F ++ I
Sbjct: 10 SSFRLASLLRLQEDPKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFHEMEQI 69
Query: 118 LITLKSEHYPVTPS-LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
L+ K++ V LF +I Y + LP ALK F M + C+ K N +L +L+
Sbjct: 70 LLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTLLNVLM 129
Query: 177 THRNYLRPAFDLFKSAH---KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER--- 230
+ FD+ + K V P+ ++NIM+R C +G + A + ++M R
Sbjct: 130 ICKE-----FDVMREHFVNIKRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNRDLV 184
Query: 231 ---------------------------------GVMPDVESYRILMQGLCRKSQVNRAVD 257
G+ P+ Y L++GLC +++ A+
Sbjct: 185 PNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFALR 244
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M G D+ Y+TL++ L + + E + +L M++KGC D V YN ++ GFC
Sbjct: 245 LKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFC 304
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
++ A K+L++M N C P+++SY ++G LC G + A + M +G +P
Sbjct: 305 KDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVV 364
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ G + + +A +L+E++ G AP + + ++C + + + VLN +
Sbjct: 365 SYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVWSVLNCL 424
Query: 438 VKVEIKGDTRIVEAGIGL 455
K+ DT + + I +
Sbjct: 425 GKINAI-DTELWKMAIAV 441
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 3/310 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLF 189
++ LIK Y + A + F M NC + L L+ + ++ AF+LF
Sbjct: 194 IYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELF 253
Query: 190 KSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ K ++P+ +YN+++ FC G + A ++F M + P+ +Y L+ G C+
Sbjct: 254 EDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCK 313
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
K +V A + E+M+ G PD +SYT+L+ LCR + E L+ M KGC D+V
Sbjct: 314 KGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVT 373
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN ++ G C++ R +A +LE +PS G N+ SYR ++ LC G + A + +M+
Sbjct: 374 YNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMML 433
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+GF PH++ S+ L+ G C+VG+V +A L L+ G P W ++ + ++
Sbjct: 434 GRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLR 493
Query: 429 KLGEVLNEIV 438
+ E+L+ ++
Sbjct: 494 RSIELLDVLI 503
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---NPDIVHYNTVVLGFCREGRAIDA 325
P+T Y L+ +K L A+++ M+ C P +V Y+T++ G CR + +A
Sbjct: 190 PNTCIYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEA 249
Query: 326 CKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
++ EDM + +P+ ++Y L+GG C G + A+ M P+ LI
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLIN 309
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G+V+ A GV EE++++G P ++ +V +C +++ ++ E+ + K
Sbjct: 310 GHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKA 369
Query: 445 DT 446
D
Sbjct: 370 DV 371
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 196/387 (50%), Gaps = 8/387 (2%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
S S +PI SP ++ KL+ D + E+F A Q + H+ +LI KLG F
Sbjct: 58 SLSLTPI-SPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFK 116
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRI 171
+I+ +L +K E SLF ++K Y ++ LP +A + M ++C P K N +
Sbjct: 117 VIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVV 176
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L++LV + R A ++F GV P ++ ++M+A C ++ A +L M + G
Sbjct: 177 LDILV-DGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG 235
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+P+ Y+ L+ LC ++V+ A+ LLEDM PD ++ +++ LCR ++ EA
Sbjct: 236 CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAA 295
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
KLL RM ++G + D + Y ++ G CR G+ +A +L +P+ PN V Y TL+ G
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGY 351
Query: 352 CDQGMFDVAKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G F+ AK + M+ G+ P + +I G G + A +L E++ P+
Sbjct: 352 VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPN 411
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEI 437
T+ +++ C +E+ E++N +
Sbjct: 412 VITYTILINGFCKQGRLEEAAEIVNSM 438
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 128/241 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++ S G+ NT YN ++ A C +G+I A LF +M +G PD+ ++
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A+ L DM +G + +T++Y TL+++ + +++A+KL+ M +G
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ C+ G + E+M G P ++S L+ GLC G + A
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K++Q MI +G +P ++LI G C +G V EA + +L G P T+ ++ +
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRH 667
Query: 422 C 422
C
Sbjct: 668 C 668
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 2/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKT-FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
L+ LI Y S + A + +M+ +P N +++ LV + YL A +L
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLV-KKGYLVSALELLN 401
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
PN +Y I++ FC G + A + N M +G+ + Y L+ LC+
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A+ L +M KG PD ++ +L+N LC+ K+ EA L M ++G + V YN
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYN 521
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T+V F A K++++M GC + ++Y L+ LC G + + M+ K
Sbjct: 522 TLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK 581
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P + LI G C GKV++A L++++ G P T+ ++ +C +++
Sbjct: 582 GIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA 641
Query: 431 GEVLNEIVKVEIKGDT 446
+ N++ I+ D
Sbjct: 642 SNLFNKLQSEGIRPDA 657
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 36/287 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI + +I+ ++ ++ + + LI + + AL+ F M
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF----- 211
CKP N ++ L + + A L+ GV+ NT +YN ++ AF
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHK-MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDS 532
Query: 212 ------------------------------CFNGDISIAYTLFNKMFERGVMPDVESYRI 241
C G + LF +M +G+ P + S I
Sbjct: 533 IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNI 592
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLCR +VN A+ L+DM+++G PD ++Y +L+N LC+ ++EA L +++ +G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
PD + YNT++ C EG DAC +L +G +PN V++ L+
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F L+D++L P+ + LIK ++ ++ L F ML P N
Sbjct: 537 FKLVDEMLF----RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNI 592
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + A + G+ P+ +YN ++ C G + A LFNK+
Sbjct: 593 LISGLC-RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
G+ PD +Y L+ C + N A LL ++ GF+P+ ++++ L+N + +K
Sbjct: 652 GIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 198/432 (45%), Gaps = 55/432 (12%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILIT--- 120
L+ SQ D L + D+A Q F + IL R K + SL +++++
Sbjct: 54 LLKSQFDSSLVLKFLDWARSQQFFSFQCKCLALHILT--RYKLYKTAQSLAEEVVVNTVD 111
Query: 121 ---------LKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
LK+ +Y S +F ++K A NL ++AL + P N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
IL+ ++ + ++ A +FK + GV PN +YNI++R FC G++ + F +M
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER 231
Query: 230 RGVMPDVE-----------------------------------SYRILMQGLCRKSQVNR 254
G +P+V SY +++ GLCR+ Q+
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKE 291
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
++LE+M + +VPD +++ TL+N C +A L M G +P++V Y T++
Sbjct: 292 TSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLIN 351
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ G A + L+ M G PN +Y TL+ G QG A + M+ M+ GF+P
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ALI G C +G++++A G+L+E+++ G P ++ I+ C +E+EK ++
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471
Query: 435 NEIVKVEIKGDT 446
E+V I D
Sbjct: 472 VEMVAKGISPDV 483
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 193/382 (50%), Gaps = 27/382 (7%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + +A + + L ++ +T LI +++ +A + + M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 157 LEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+E P N ++ + R + A L + + G +P+ SY+ ++ FC N
Sbjct: 405 VENGFTPTIITYNALINGHCILGR--MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A+ L +M +G+ PDV +Y L+QGLC++ ++ DL ++ML+ G PD ++YT
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L+N+ C + L +A +L M KG +PDIV YN ++ GF ++ R +A ++L +
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582
Query: 336 GCLPNLVSYRTLVG---------------GLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+PN ++Y TL+ G C +G+ + A + ++ M+ KG+ + V +
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVK 439
+I G VG +++A + +E+L +G APH T + + + G+E+E LN+++
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE-----LNQLLD 697
Query: 440 VEIKGDTRIVEAGIGLEDYLIG 461
+K RI EA L LIG
Sbjct: 698 YTLK-SCRITEA--ALAKVLIG 716
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 161/312 (51%), Gaps = 3/312 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY +I Y + A K R M P N ++ L ++ +
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC-REGQMKETSE 294
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + K +P+ ++N ++ +C G+ A L +M + G+ P+V +Y L+ +C
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMC 354
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +NRA++ L+ M ++G P+ +YTTL++ ++ L++AY+++ M G P I+
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G C GR DA +L++M G +P++VSY T++ G C + A + M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
++KG SP + +LI+G C ++ E C + +E+L G P E T+ ++ C ++
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534
Query: 428 EKLGEVLNEIVK 439
+K + +E+++
Sbjct: 535 DKALRLHDEMIQ 546
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++I L R +IL + Y F LI Y +AL M
Sbjct: 275 SYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM 334
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ P ++ + N L A + G+ PN ++Y ++ F G
Sbjct: 335 VKNGLSPNVVTYTTLINSMCKAGN-LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ AY + +M E G P + +Y L+ G C ++ A LL++M+ +GF+PD +SY+T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ CR ++L +A++L M KG +PD+ Y++++ G C++ R + C + ++M S G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ V+Y +L+ C +G D A + MI KGFSP + LI GF + EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 397 GVLEELLKAGEAPHEDTWVMIV 418
+L +LL P+E T+ ++
Sbjct: 574 RLLLKLLYEESVPNEITYNTLI 595
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 18/260 (6%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY LI L + + + D+ + S P +T LI Y D+AL+
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM-------- 207
M++ P N ++ L K ++ V PN +YN +
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLE 602
Query: 208 -------MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
M+ FC G ++ A + M ++G + E Y +++ G + + +A +L +
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF-CRE 319
+ML+ GF P +++ L SL + K E +LL +K C V++G +E
Sbjct: 663 EMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL-DYTLKSCRITEAALAKVLIGINSKE 721
Query: 320 GRAIDACKVLEDMPSNGCLP 339
G VL+DM +G LP
Sbjct: 722 GNMDAVFNVLKDMALSGLLP 741
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 191/412 (46%), Gaps = 39/412 (9%)
Query: 43 SPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI 102
+P E+S++ S I + Q L ++ A F +A R P F HS +Y IL+
Sbjct: 60 NPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILV 119
Query: 103 LKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
LG ++ F+++ D LI ++ H + + + + + Y+ +NLP A++ F M EF
Sbjct: 120 NILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGL 179
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
+P L+++L +L + +++ A F KH K+Y+I++R + G+ A
Sbjct: 180 RPSVDDLDKLLYVLCKCK-HVKCAQQFFDRV-KHKFEAKAKTYSILVRGWGDIGEAVEAR 237
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG--------------- 266
+F++M RG DV +Y L++ LC+ V+ A + ++ + G
Sbjct: 238 KVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAY 297
Query: 267 --------------------FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
VP+ +Y ++ LC+ K+ +AY+LL M +G +PD
Sbjct: 298 CEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDA 357
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YNT++ C A K++ M + CLP+ SY L+ L G FD A + +
Sbjct: 358 WSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWES 417
Query: 367 MISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
M +GF P S +I G C GK++EAC E ++ G P+ T M+
Sbjct: 418 MGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEML 469
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 120/282 (42%), Gaps = 4/282 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A++ FD + F TY IL+ G + ++ + + L+
Sbjct: 202 AQQFFDRVKHK--FEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLL 259
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ + D A K FR + +P I N + F + ++ +
Sbjct: 260 EALCKGGNVDEAYKMFREIGSHGVEPDACSYA-IFIRAYCEANNIHSVFSVLDRMKRYDL 318
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+PN +YN +++ C NG + AY L ++M ERGV PD SY ++ C S+VNRA
Sbjct: 319 VPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATK 378
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L+ M+ +PD SY LL L R + A ++ M +G P + Y+ ++ G C
Sbjct: 379 LISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLC 438
Query: 318 -REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++G+ +AC+ E M G P + L L G+ D
Sbjct: 439 KKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLD 480
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 1/269 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ +L T R + L + H N + ++ R++ S A F++M E
Sbjct: 118 LVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEF 177
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V+ L+ LC+ V A D + F +Y+ L+ + EA
Sbjct: 178 GLRPSVDDLDKLLYVLCKCKHVKCAQQFF-DRVKHKFEAKAKTYSILVRGWGDIGEAVEA 236
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ M+ +GC D++ YN+++ C+ G +A K+ ++ S+G P+ SY +
Sbjct: 237 RKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRA 296
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C+ + M P+ + +IK C GKV++A +L E+++ G +P
Sbjct: 297 YCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPD 356
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ I+ C E+ + ++++ +VK
Sbjct: 357 AWSYNTILAYHCEHSEVNRATKLISIMVK 385
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 8/322 (2%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P P L + +I ++ P L+T N N + ++L +N A
Sbjct: 42 PPLPGLVNEISRILSDQRNPHHDLET-----SLNAFSSEISTNLVEQVLKRCKNLGFSAH 96
Query: 187 DLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP-DVESYRILMQ 244
F A + G + +SY+I++ + +I + +M E + E ++ +
Sbjct: 97 RFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFR 156
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
R + + A+ + M G P LL LC+ K ++ A + R+K K
Sbjct: 157 SYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEA 215
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
Y+ +V G+ G A++A KV ++M GC ++++Y +L+ LC G D A K
Sbjct: 216 KAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMF 275
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ + S G P I+ +C + VL+ + + P+ T+ I+ ++C
Sbjct: 276 REIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKN 335
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
++E ++L+E+++ + D
Sbjct: 336 GKVEDAYQLLHEMMERGVSPDA 357
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 162/310 (52%), Gaps = 3/310 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLF 189
++ LIK Y + A + F M + NC + L L+ + ++ AF+LF
Sbjct: 194 IYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELF 253
Query: 190 KSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ K ++P+ +YN+++ FC G + A ++F M + P+ +Y L+ G C+
Sbjct: 254 EDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCK 313
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
K +V A + E+M+ G PD +SYT+L+ LCR + E L+ M KGC D+V
Sbjct: 314 KGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVT 373
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN ++ G C++ R +A +LE +PS G N+ SYR ++ LC G + A + +M+
Sbjct: 374 YNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMML 433
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+GF PH++ S+ L+ G C+VG+V +A L L+ G P W ++ + ++
Sbjct: 434 GRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLR 493
Query: 429 KLGEVLNEIV 438
+ E+L+ ++
Sbjct: 494 RSIELLDVLI 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---NPDIVHYNTVVLGFCREGRAIDA 325
P+T Y L+ +K L A+++ M+ C P +V Y+T++ G CR + +A
Sbjct: 190 PNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEA 249
Query: 326 CKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
++ EDM + +P+ ++Y L+GG C G + A+ M P+ LI
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLIN 309
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G+V+ A GV EE++++G P ++ +V +C +++ ++ E+ + K
Sbjct: 310 GHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKA 369
Query: 445 DT 446
D
Sbjct: 370 DV 371
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 194/366 (53%), Gaps = 4/366 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+++++F A + +F+ +ST +I F+ ++ +L ++ E+ + F +
Sbjct: 59 ISEQMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVV 118
Query: 137 IKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA--FD-LFKSA 192
+ Y +++LP++A+ F M+ EF CK K N +L +++ Y R +D + S
Sbjct: 119 FRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN S+N++++A C G + A +F M E+ +PD +Y LM GLC++ ++
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERI 238
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ AV LL++M ++G P + Y L++ LC+K L KL+ M +KGC P+ V YNT+
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C +G+ A +LE M S+ C+PN V+Y TL+ GL Q + + M +G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + LI G GK +EA + +++ + G P+ + ++ +C + + E
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418
Query: 433 VLNEIV 438
+LN ++
Sbjct: 419 ILNGMI 424
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 165/314 (52%), Gaps = 1/314 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +IK + DRA++ FR M E C P +++ L + A L
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEER-IDEAVLLLDEM 248
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P+ YN+++ C GD+S L + MF +G P+ +Y L+ GLC K ++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++AV LLE M++ +P+ ++Y TL+N L ++++ + +LL M+ +G + Y+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVL 368
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G +EG+A +A + + M GC PN+V Y ++ GLC +G + AK+ + MIS G
Sbjct: 369 ISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ +L+KGF G +EA V E+ + G + +E + +++ +C +++
Sbjct: 429 LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMM 488
Query: 433 VLNEIVKVEIKGDT 446
V ++++ + IK DT
Sbjct: 489 VWSKMLTIGIKPDT 502
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 20/310 (6%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+LI+++ Y + +++ LI + + A+ ++ M E C+P + +++ L
Sbjct: 349 LLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGL- 407
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
A ++ G LPN +Y+ +M+ F G A ++ +M E G +
Sbjct: 408 CREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNE 467
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL--- 293
Y +L+ GLC +V A+ + ML G PDT++Y++++ LC + A KL
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHE 527
Query: 294 -LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
LC+ + K PD+V YN ++ G C + A +L M GC P++++ T + L
Sbjct: 528 MLCQEEPKS-QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLS 586
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
++ S S L+ +V AC ++E +L AP
Sbjct: 587 EK--------------SDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTS 632
Query: 413 TWVMIVPQIC 422
TW MIVP+IC
Sbjct: 633 TWAMIVPEIC 642
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 162/312 (51%), Gaps = 3/312 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLF 189
++ L+K Y ++ + A K M E+ C + L L+ + ++ AF+LF
Sbjct: 184 VYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEAFELF 243
Query: 190 KSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ K ++P+ YN+++ FC G + A +F M + P+ +Y L+ G C+
Sbjct: 244 EEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLINGHCK 303
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
K+ + A + E+M N G PD +SYT L+ LCR + E L+ MK KGC D+V
Sbjct: 304 KADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRADVVT 363
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN V+ G C++GR ++A +LE +P G N+ SYR L+ LC +G D A + LM+
Sbjct: 364 YNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRILMNCLCSRGEMDRAVGLLGLML 423
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+GF PH++ S+ L+ G C+ G++ +A L L AG P W +V +C +
Sbjct: 424 GRGFLPHYAASNNLLIGLCDAGRIADATMALYGLADAGFMPEPRCWERLVESVCRERKQR 483
Query: 429 KLGEVLNEIVKV 440
+ ++L +V V
Sbjct: 484 RSTDLLEVLVGV 495
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 182/375 (48%), Gaps = 14/375 (3%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
+ +LI S A ++F+ AS Q F H+ +T+ L+++L RA+ +L SE
Sbjct: 44 LARLIESSPSAQRALDLFNAASSQHAFSHTPATFSALLVRLARARLPRAAAAVLRRTASE 103
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF------NCKPLPKQLNRILELLVTH 178
F L+++ PD AL R + + K L L+R++ H
Sbjct: 104 PCRFQEPQFLPLVRLLP----PDHALVLLRFLPALLRTSRVSHKALAVCLDRLVSSRGCH 159
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---RGVMPD 235
DL +K+ PNT YNI+++ + NG++ A+ + ++M E V P+
Sbjct: 160 GVLNELLADLRDPRNKYLPRPNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPN 219
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ +Y L+ GLCR ++ A +L E+M+ K VPD L Y +++ CR+ ++ +A +
Sbjct: 220 LVTYSTLIGGLCRGGKMKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIF 279
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ C P+ +Y T++ G C++ A V E+M ++G P+ VSY L+G LC
Sbjct: 280 GFMRKNECEPNTFNYATLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRH 339
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M KG + +I+G C G+ EA G+LE + G + ++
Sbjct: 340 GSVDEGIGLVLEMKEKGCRADVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASY 399
Query: 415 VMIVPQICAGEEMEK 429
+++ +C+ EM++
Sbjct: 400 RILMNCLCSRGEMDR 414
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL---PNLVSYRTLVGGLCDQGMFDVA 360
P+ YN +V + + G A KVL++M C PNLV+Y TL+GGLC G A
Sbjct: 180 PNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEA 239
Query: 361 KKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+ + MI K P + + +I GFC G+VD+A + + K P+ + ++
Sbjct: 240 FELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLIN 299
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
C ++E V E+ ++ D A IG
Sbjct: 300 GHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIG 334
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 180/356 (50%), Gaps = 8/356 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L +A ++L ++ P ++ +IK ++ AL F+++
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNG 215
C P N +++ LV + AF +F+S H LPN +Y ++ C +G
Sbjct: 92 AGTKCTPDIITFNILVDALVKS-GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDG 150
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L + M E G P+V +Y +L++GLC+ + ++ LL++M +GF PD + Y
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TLLN LC+ ++L EA +L+ M GC P +V YN+++ FCR + A ++++ M
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD-- 393
GC P++++Y T++ GLC D A+ ++ M++ P +I G C +VD
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 394 ----EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
AC +LE + + G P+ T+ +++ +C + ++ +L ++ E+ D
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 134/256 (52%), Gaps = 11/256 (4%)
Query: 185 AFDLFKSAHKHG----------VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
A +L A +HG +PN +Y ++ C G + AY L ++M +RG+ P
Sbjct: 4 ALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
V + +++GLC+ + A+ + + PD +++ L+++L + ++ EA+++
Sbjct: 64 GVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 295 CRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M C P++V Y TV+ G C++G+ A ++L+ M GC PN+++Y LV GLC
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G D +Q M +GF P + + L+ G C ++DEA +++ ++++G P T
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Query: 414 WVMIVPQICAGEEMEK 429
+ ++ C +++++
Sbjct: 244 YNSLMELFCRSKQVDR 259
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 9/333 (2%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + ++S YP T + L++++ S DRA + + M E C P N ++ L
Sbjct: 229 VQLMIRSGCYP-TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL------FNKMFER 230
L A L K +P+ +Y+ ++ C + + + L M +
Sbjct: 288 RDAR-LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G P+ +Y ++++GLCR + +A+ LL M++ VPD S++ ++ SLC+ L A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
YK+ M + C P+ V Y ++ G + G A +V E M + P + +Y +++ G
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDG 465
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC G + A + ++ MI K P + ALI+G C V V+EA + + + G A
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++V ++C + + V N++++ K
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 123/238 (51%), Gaps = 8/238 (3%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+ N+++RA G A LF E +P+ +Y L+ GLC+ ++++A +LL++M
Sbjct: 4 ALNLLVRA----GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++G P + ++ LC+ + +A + C PDI+ +N +V + GR
Sbjct: 57 RDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 323 IDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ E M S+ CLPN+V+Y T++ GLC G D A + + LM G P+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
L++G C G+ D+ +L+E+ + G P + ++ +C +++ E++ +++
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 5/347 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ L +A+ F + + ++ +P++F+Y LI D A +
Sbjct: 54 TYGYLLRSLCQAQRFEEARSVFRGMAAQG--CSPNVFSYSILIAGLCRGQKVDEAAELLN 111
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ +P +L L L+ A DLF G P+ YN+++ F
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGK-LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
GD+ AY LF +M E+G +P V +Y L+ G RK + R L +DML +G VP+ ++
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
LL+ C+ + EA++L M+ GC PD+V YNT++ G C +G+ +A ++L +M
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIR 290
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+G P++VSY L+ G G D A K + G P +I C GKV
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
A V ++++ G AP + +V +C GE + + E+ +VK E
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 1/322 (0%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
HY + YL+++ A+S D T+ ML C P +L L + +
Sbjct: 12 HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRF-EE 70
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F+ G PN SY+I++ C + A L N+M + G P+V +Y L+
Sbjct: 71 ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ AVDL M+ +G PD + Y L++ +K + EAY+L M KGC P
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ YN+++ GF R+G + +DM GC+PN+ ++ L+ G C G A +
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M S G P + LI+G C+ GK EA +L E++++G P ++ +++
Sbjct: 251 LEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
++ ++ EI K ++ D
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDA 332
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 175/375 (46%), Gaps = 13/375 (3%)
Query: 81 IFDYASRQPNFRHSNSTY---LILILKLGRAKY-FSLIDDILITLKSEHYPVTPSLFTY- 135
F +A Q ++ H +Y L ++ K GR + + +D+L P+ +TY
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAA------GCVPNTYTYG 56
Query: 136 -LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L++ ++ + A FR M C P + ++ L + + A +L
Sbjct: 57 YLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK-VDEAAELLNEMID 115
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PN +Y ++ C G + A LF++M RG PD Y +L+ G +K +
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A L E+ML KG +P +Y +LL+ RK + L M +GC P+I +N ++
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
GFC+ G ++A ++ +M S GC P++VSY TL+ G+C +G A++ ++ MI G P
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ LI G+ G +D A + E+ K+G P ++ I+ +C ++ V
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 435 NEIVKVEIKGDTRIV 449
+++ D +V
Sbjct: 356 KDMIANGSAPDAAVV 370
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++FTY L+ ++ R F+ ML C P N +L+ + + A
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE-AHR 248
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G P+ SYN ++R C G A L +M GV PD+ SY IL+ G
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ A+ L ++ G PD SY+T+++ LCR K+ A+ + M G PD
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+V+G CR R ++C++ + M C+P + Y L+ LC D + +
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL 428
Query: 368 ISKGFSPHFSVSHALIK 384
+GFSP +S +++
Sbjct: 429 TERGFSPDVEISKVILE 445
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y LI Y++S D A+K F + + +P + I++ L + A
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL-CRAGKVGAA 351
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F +FK +G P+ ++ C ++ + LF M + +P + Y +LM
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
LC+ + + ++ ++ +GF PD +L +L R
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 171/349 (48%), Gaps = 38/349 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V+P++FTY LI+ + + D AL+ F M + C P N +++ R +
Sbjct: 201 VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK-IDDG 259
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNG---DISIAYTLFNK---------------- 226
F+L +S G+ PN SYN+++ C G +IS T NK
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 227 ----------------MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
M G+ P V +Y L+ +C+ +NRA + L+ M +G P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YTTL++ +K + EAY++L M G +P +V YN ++ G C G+ +DA VLE
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
DM G P++VSY T++ G C D A + + M++KG P +LI+GFC
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQR 499
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ EAC + +E+L+ G P E T+ ++ C +++K ++ NE+V+
Sbjct: 500 RTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 171/353 (48%), Gaps = 35/353 (9%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
T S+F ++K Y+ L D+AL P N +L+ + + + A ++
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
FK + V PN +YNI++R FC G++ +A F++M ++G +P+V +Y L+ G C+
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+++ +LL M KG P+ +SY ++N LCR+ +++E +L M +G + D V
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312
Query: 309 YNTVVLGFCREGRAIDA--------------------------CKV---------LEDMP 333
YNT++ G+C+EG A CK L+ M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN +Y TLV G +G + A + ++ MI GFSP +ALI G C GK+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A VLE++ + G P ++ ++ C ++++ V ++V IK DT
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDT 485
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 161/393 (40%), Gaps = 51/393 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++I L R I +L + Y + + LIK Y + +AL M
Sbjct: 277 SYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P ++ + N R A + G+ PN ++Y ++ F G
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNR-ATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ AY + +M + G P V +Y L+ G C ++ A+ +LEDM KG PD +SY+T
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L+ CR + EA ++ +M KG PD + Y++++ GFC + R +AC + ++M G
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP---------------------- 374
P+ +Y L+ C +G A + M+ KG P
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAK 575
Query: 375 ----------------------------HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
F +LIKGFC G + EA V E +L+
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKN 635
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P + +++ C G ++ K + E+VK
Sbjct: 636 HKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVK 668
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 161/395 (40%), Gaps = 55/395 (13%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + +A + + L ++ +T L+ +++ + A + + M
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM 406
Query: 157 LEFNCKPLPKQLNRILELLVTH--RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
++ P N ++ H + A + + + G+ P+ SY+ ++ FC +
Sbjct: 407 IDNGFSPSVVTYNALIN---GHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
D+ A + KM +G+ PD +Y L+QG C + + A DL ++ML G PD +Y
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN------------------------ 310
T L+N+ C + L++A +L M KG PD+V Y+
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583
Query: 311 --------------------------TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
+++ GFC +G +A +V E M P+ +Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAY 643
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
++ G C G A + M+ GF H AL+K GKV+E V+ +L+
Sbjct: 644 NVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLR 703
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ E + ++V M+ + +VL E+ K
Sbjct: 704 SCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
KS +++ FC G ++ A +F M E+ PD +Y +++ G CR + +A L ++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKE 665
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC-REG 320
M+ GF+ T++ L+ +L ++ K+ E ++ + ++ C V++ REG
Sbjct: 666 MVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANV-LRSCELSEAEQAKVLVEINHREG 724
Query: 321 RAIDACKVLEDMPSNGCLPN 340
VL +M +G LPN
Sbjct: 725 NMDVVLDVLAEMAKDGFLPN 744
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 204/443 (46%), Gaps = 41/443 (9%)
Query: 25 KTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDY 84
+ P + F +S+ +P P +QQ S+ V K + + + F
Sbjct: 14 QKPLIPFVLNSNPIINPRDPNKQQLLQESD----------VLKRLKTDRNLSSVLGFFSA 63
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+ F+H+ STY ++I +LGR ++ IL +K + LF +I Y
Sbjct: 64 IANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVG 123
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++ALK F + EF CKP + N +L+ L++ N + L+ + K G++PN +Y
Sbjct: 124 SAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSE-NKFQMINPLYTNMKKDGLIPNVFTY 182
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPD----------------------------- 235
NI+++A C N + A+ LF +M +G PD
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP 242
Query: 236 -VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
V Y L+ G+C++ ++ A+ LL +M++ G P+ +SY+ ++NSLC + A+ L
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+M ++GC+ +I + ++ G G+ +A + + M +GC PN+V+Y TL+ GLC
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 362
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G + A + M G P+ + LI GF G + A ++ G P+ T+
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
+V +C ++ ++ ++
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKM 445
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 161/335 (48%), Gaps = 33/335 (9%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F +I+ + +K + + P++FTY L+K +++ D A K F M C P
Sbjct: 160 FQMINPLYTNMKKDG--LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTY 217
Query: 169 NRILELL-----------------------------VTHRNYLRPAFDLFKSAHKHGVLP 199
++ L + + A L +GV P
Sbjct: 218 TTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY+ ++ + C +G++ +A+ LF +MF RG ++ ++ L++G + ++ A+DL
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M+ G P+ ++Y TL++ LC L EA ++ +M+ GC P++ Y+ ++ GF +
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + A + M S+GC PN+V+Y +V LC MFD A ++ M +G +P+
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ IKG C G+V+ A +LE + G P+ T+
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 124/244 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R L A DL+K + G PN +YN ++ C NG + A + ++M G +P+V +
Sbjct: 327 RGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTT 386
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y IL+ G + + A + M++ G P+ ++YT +++ LC+ +A L+ +M
Sbjct: 387 YSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMT 446
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++GC P+ + +NT + G C GR A K+LE M +GCLPN+ +Y L+ L ++
Sbjct: 447 LEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYE 506
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A Q + ++ P+ + ++ GF G + EA + + L G AP T+ ++
Sbjct: 507 EAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Query: 419 PQIC 422
C
Sbjct: 567 HAYC 570
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 41/345 (11%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LIK AL ++ M++ C+P N ++ L ++ + L A +
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS-LEEALQVCDQM 375
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G LPN +Y+I++ F +GD+ A +N+M G P+V +Y ++ LC+ S
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---------- 302
++A L+E M +G P+T+++ T + LC ++ A KLL RM+ GC
Sbjct: 436 DQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495
Query: 303 -------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
P++V YNTV+ GF R G +A ++ G
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS-KGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ ++Y T++ C QG +A + ++ + S K + P +LI G CN ++EA
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG--EVLNEIVK 439
L++ + G P+ TW +V C + + +G +L++I++
Sbjct: 616 AFLDKAINQGICPNFATWNALVR--CFFDSLGHMGPIHILDDILR 658
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L + F + ++ + E F IK + + A+K M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N +L+ L Y AF LF+ + PN +YN ++ F G
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKY-EEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN-KGFVPDTLSYT 275
+ A LF K RG PD +Y ++ C++ +V A L+E + + K + PD ++YT
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L+ C + EA L + +G P+ +N +V F + +L+D+
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
Query: 336 G 336
G
Sbjct: 660 G 660
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 204/443 (46%), Gaps = 41/443 (9%)
Query: 25 KTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDY 84
+ P + F +S+ +P P +QQ S+ V K + + + F
Sbjct: 14 QKPLIPFVLNSNPIINPRDPNKQQLLQESD----------VLKRLKTDRNLSSVLGFFSA 63
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+ F+H+ STY ++I +LGR ++ IL +K + LF +I Y
Sbjct: 64 IANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVG 123
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++ALK F + EF CKP + N +L+ L++ N + L+ + K G++PN +Y
Sbjct: 124 SAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSE-NKFQMINPLYTNMKKDGLIPNVFTY 182
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPD----------------------------- 235
NI+++A C N + A+ LF +M +G PD
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP 242
Query: 236 -VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
V Y L+ G+C++ ++ A+ LL +M++ G P+ +SY+ ++NSLC + A+ L
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+M ++GC+ +I + ++ G G+ +A + + M +GC PN+V+Y TL+ GLC
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 362
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G + A + M G P+ + LI GF G + A ++ G P+ T+
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
+V +C ++ ++ ++
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKM 445
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 161/335 (48%), Gaps = 33/335 (9%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F +I+ + +K + + P++FTY L+K +++ D A K F M C P
Sbjct: 160 FQMINPLYTNMKKDG--LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTY 217
Query: 169 NRILELL-----------------------------VTHRNYLRPAFDLFKSAHKHGVLP 199
++ L + + A L +GV P
Sbjct: 218 TTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY+ ++ + C +G++ +A+ LF +MF RG ++ ++ L++G + ++ A+DL
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M+ G P+ ++Y TL++ LC L EA ++ +M+ GC P++ Y+ ++ GF +
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + A + M S+GC PN+V+Y +V LC MFD A ++ M +G +P+
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ IKG C G+V+ A +LE + G P+ T+
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 124/244 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R L A DL+K + G PN +YN ++ C NG + A + ++M G +P+V +
Sbjct: 327 RGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTT 386
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y IL+ G + + A + M++ G P+ ++YT +++ LC+ +A L+ +M
Sbjct: 387 YSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMT 446
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++GC P+ + +NT + G C GR A K+LE M +GCLPN+ +Y L+ L ++
Sbjct: 447 LEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYE 506
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A Q + ++ P+ + ++ GF G + EA + + L G AP T+ ++
Sbjct: 507 EAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Query: 419 PQIC 422
C
Sbjct: 567 HAYC 570
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 41/345 (11%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LIK AL ++ M++ C+P N ++ L ++ + L A +
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS-LEEALQVCDQM 375
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G LPN +Y+I++ F +GD+ A +N+M G P+V +Y ++ LC+ S
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMF 435
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---------- 302
++A L+E M +G P+T+++ T + LC ++ A KLL RM+ GC
Sbjct: 436 DQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495
Query: 303 -------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
P++V YNTV+ GF R G +A ++ G
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS-KGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ ++Y T++ C QG +A + ++ + S K + P +LI G CN ++EA
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG--EVLNEIVK 439
L++ + G P+ TW +V C + + +G +L++I++
Sbjct: 616 AFLDKAINQGICPNFATWNALVR--CFFDSLGHMGPIHILDDILR 658
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L + F + ++ + E F IK + + A+K M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N +L+ L Y AF LF+ + PN +YN ++ F G
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKY-EEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN-KGFVPDTLSYT 275
+ A LF K RG PD +Y ++ C++ +V A L+E + + K + PD ++YT
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L+ C + EA L + +G P+ +N +V F + +L+D+
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
Query: 336 G 336
G
Sbjct: 660 G 660
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 180/356 (50%), Gaps = 8/356 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L +A ++L ++ P ++ +I+ ++ AL F+++
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNG 215
C P N +++ LV + AF +F+S H LPN +Y ++ C +G
Sbjct: 92 AGTKCTPDIITFNILVDALVKS-GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDG 150
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L + M E G P+V +Y +L++GLC+ + ++ LL++M +GF PD + Y
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TLLN LC+ ++L EA +L+ M GC P +V YN+++ FCR + A ++++ M
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD-- 393
GC P++++Y T++ GLC D A+ ++ M++ P +I G C +VD
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 394 ----EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
AC +LE + + G P+ T+ +++ +C + ++ +L ++ E+ D
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 134/256 (52%), Gaps = 11/256 (4%)
Query: 185 AFDLFKSAHKHG----------VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
A +L A +HG +PN +Y ++ C G + AY L ++M +RG+ P
Sbjct: 4 ALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPP 63
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
V + +++GLC+ + A+ + + PD +++ L+++L + ++ EA+++
Sbjct: 64 GVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF 123
Query: 295 CRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M C P++V Y TV+ G C++G+ A ++L+ M GC PN+++Y LV GLC
Sbjct: 124 ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCK 183
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G D +Q M +GF P + + L+ G C ++DEA +++ ++++G P T
Sbjct: 184 AGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Query: 414 WVMIVPQICAGEEMEK 429
+ ++ C +++++
Sbjct: 244 YNSLMELFCRSKQVDR 259
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 9/333 (2%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + ++S YP T + L++++ S DRA + + M E C P N ++ L
Sbjct: 229 VQLMIRSGCYP-TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL------FNKMFER 230
L A L K +P+ +Y+ ++ C + + + L M +
Sbjct: 288 RDAR-LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G P+ +Y ++++GLCR + +A+ LL M++ VPD S++ ++ SLC+ L A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
YK+ M + C P+ V Y ++ G + G A +V E M + P + +Y +++ G
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDG 465
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC G + A + ++ MI K P + ALI+G C V V+EA + + + G A
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++V ++C + + V N++++ K
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 123/238 (51%), Gaps = 8/238 (3%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+ N+++RA G A LF E +P+ +Y L+ GLC+ ++++A +LL++M
Sbjct: 4 ALNLLVRA----GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++G P + ++ LC+ + +A + C PDI+ +N +V + GR
Sbjct: 57 RDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 323 IDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ E M S+ CLPN+V+Y T++ GLC G D A + + LM G P+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
L++G C G+ D+ +L+E+ + G P + ++ +C +++ E++ +++
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 171/331 (51%), Gaps = 3/331 (0%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
KL+ ++ P A +FD ASRQP + HS +L+++ +L K + I+ +K++
Sbjct: 15 KLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKC 74
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPA 185
T + ++K YA+S +P+ AL F+ M E F CKP + N +L + N L A
Sbjct: 75 KCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFI-EANLLEKA 133
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
G+LPN ++YNI+++ A L + M+ + + PDV SY ++ G
Sbjct: 134 ESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVING 193
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC-NP 304
+ + + A+++ ++M +G VPD + Y +++ ++ + ++ R+ C P
Sbjct: 194 MVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYP 253
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN ++ G C+ GR ++ ++ E M N C +L +Y +L+ GLCD G D A +
Sbjct: 254 NVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVY 313
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ M+ + +AL+ GFC GK+ E+
Sbjct: 314 KEMVKRSVVVDVVTYNALLNGFCRAGKIKES 344
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 119/237 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + K+G + N ++ F + A F +M +G P V SY L+
Sbjct: 448 ALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN 507
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + + A +++ML K + PD ++Y+ L++ LC+ KK+ A L ++ VKG P
Sbjct: 508 GLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEP 567
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ +N ++ G C G+ DA + +M + CLPNLV++ TL+ GL ++A
Sbjct: 568 DVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIW 627
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M GF P + +KG C+ G++ + + ++ LK G P TW ++V +
Sbjct: 628 ACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAV 684
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 167/359 (46%), Gaps = 6/359 (1%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D + KEI++ + + TY ++I L + F ++ +K +
Sbjct: 232 RGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM--D 289
Query: 132 LFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
LFTY LI + D A++ ++ M++ + N +L ++ +F+L+
Sbjct: 290 LFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGF-CRAGKIKESFELW 348
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K N SYNI +R N + A +++ + RG D +Y +L+ GLC+
Sbjct: 349 VMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+N+A+ +L++ + G D +Y+++++ L ++ ++ EA ++ +M GC
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N ++ GF R + +A +M + GC P +VSY TL+ GLC F A +++ M+
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
K + P L+ G C K+D A + ++L G P +++ +C+ ++E
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIE 586
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 11/304 (3%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
++TY +LI L + + + IL K + ++ ++ ++ D AL
Sbjct: 394 STTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVH 453
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M ++ C+ P N ++ V + L A F+ G P SYN ++ C
Sbjct: 454 QMDKYGCELSPHVCNPLINGFV-RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKA 512
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
S AY+ +M E+ PD+ +Y +LM GLC+ +++ A++L +L KG PD +
Sbjct: 513 ERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH 572
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF-----CREGRAIDACKVL 329
L++ LC K+ +A L MK C P++V +NT++ G C I AC
Sbjct: 573 NILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWAC--- 629
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M NG P+++SY + GLC G + G P + L++ +
Sbjct: 630 --MFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKL 687
Query: 390 GKVD 393
G +D
Sbjct: 688 GPLD 691
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 152/333 (45%), Gaps = 11/333 (3%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKI 139
F+ PN + TY ILI + + F +L + S+ + P +++Y +I
Sbjct: 140 FETVGILPNLQ----TYNILIKISVKKRQFVEAKGLLDWMWSKD--LKPDVYSYGTVING 193
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
+S AL+ F M E P N +++ +Y++ + V P
Sbjct: 194 MVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYP 253
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N +YN+M+ C G + ++ +M + D+ +Y L+ GLC V+ AV++
Sbjct: 254 NVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVY 313
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++M+ + V D ++Y LLN CR K++E+++L M + C+ ++V YN + G
Sbjct: 314 KEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFEN 372
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ +A V E + G + +Y L+ GLC G + A K ++ G
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAG--EAPH 410
+++ G G+VDEA G++ ++ K G +PH
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 220 AYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A F KM E G P + SY L+ + + +A L G +P+ +Y L+
Sbjct: 97 ALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILI 156
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+K++ EA LL M K PD+ Y TV+ G + G + A +V ++M G +
Sbjct: 157 KISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLV 216
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+++ Y ++ G +G + K+ + +L+ P+ + +I G C +G+ DE+
Sbjct: 217 PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLE 276
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ E + K T+ ++ +C ++ EV E+VK
Sbjct: 277 MWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 5/347 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ L +A+ F + + ++ +P++F+Y LI D A +
Sbjct: 54 TYGYLLRSLCQAQRFEEARSVFRGMAAQG--CSPNVFSYSILIAGLCRGQKVDEAAELLN 111
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ +P +L L L+ A DLF G P+ YN+++ F
Sbjct: 112 EMIDGGHQPNVVTYGSLLSGLCKMGK-LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
GD+ AY LF +M E+G +P V +Y L+ G RK + R L +DML +G VP+ ++
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
LL+ C+ + EA++L M+ GC PD+V YNT++ G C +G+ +A ++L +M
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIR 290
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+G P++VSY L+ G G D A K + G P +I C GKV
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
A V ++++ G AP + +V +C GE + + E+ +VK E
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 1/322 (0%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
HY + YL+++ A+S D T+ ML C P +L L + +
Sbjct: 12 HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRF-EE 70
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F+ G PN SY+I++ C + A L N+M + G P+V +Y L+
Sbjct: 71 ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ AVDL M+ +G PD + Y L++ +K + EAY+L M KGC P
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ YN+++ GF R+G + +DM GC+PN+ ++ L+ G C G A +
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M S G P + L++G C+ GK EA +L E++++G P ++ +++
Sbjct: 251 LEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
++ ++ EI K ++ D
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDA 332
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 146/263 (55%), Gaps = 2/263 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G +PNT +Y ++R+ C A ++F M +G P+V SY IL+ GLCR +V+ A
Sbjct: 47 GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+LL +M++ G P+ ++Y +LL+ LC+ KL+EA L RM +GC PD V YN ++ G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
F ++G +A ++ E+M GC+P + +Y +L+ G +G F + + M+ +G P+
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ L+ GFC +G + EA + E+ G P ++ ++ +C+ + + +L
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286
Query: 436 EIVKVEIKGDTRIVEAGIGLEDY 458
E+++ + D IV I ++ Y
Sbjct: 287 EMIRSGVGPD--IVSYNILIDGY 307
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 175/375 (46%), Gaps = 13/375 (3%)
Query: 81 IFDYASRQPNFRHSNSTY---LILILKLGRAKY-FSLIDDILITLKSEHYPVTPSLFTY- 135
F +A Q ++ H +Y L ++ K GR + + +D+L P+ +TY
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGA------GCVPNTYTYG 56
Query: 136 -LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L++ ++ + A FR M C P + ++ L + + A +L
Sbjct: 57 YLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK-VDEAAELLNEMID 115
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PN +Y ++ C G + A LF++M RG PD Y +L+ G +K +
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A L E+ML KG +P +Y +LL+ RK + L M +GC P+I +N ++
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
GFC+ G ++A ++ +M S GC P++VSY TL+ G+C +G A++ ++ MI G P
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ LI G+ G +D A + E+ K+G P ++ I+ +C ++ V
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 435 NEIVKVEIKGDTRIV 449
+++ D +V
Sbjct: 356 KDMIANGSAPDAAVV 370
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 152/351 (43%), Gaps = 9/351 (2%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I CR QK+ + L E+ D QPN TY L+ L + D+
Sbjct: 94 IAGLCRGQKVDEAAE---LLNEMID-GGHQPNV----VTYGSLLSGLCKMGKLKEAVDLF 145
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ P ++ LI +++ A + F MLE C P N +L
Sbjct: 146 SRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRK 205
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ R LFK + G +PN ++N ++ FC GD+ A+ LF +M G PDV S
Sbjct: 206 GEFGRVQ-SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y LM+G+C K + + A LL +M+ G PD +SY L++ + L A KL +
Sbjct: 265 YNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD Y+T++ CR G+ A V +DM +NG P+ LV GLC
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ + Q M+ P + L+ C + D+ C + EL + G +P
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 2/318 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++S H P S + LI S + A+ F+ M + CKP N I++ L R
Sbjct: 190 VRSGHEPDVIS-YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR- 247
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A D G+ P+ +YN ++ C G ++ A LF +M + G PDV +Y
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ L + VN A D L +M+++G PD ++YTT+L+ LC +L EA +L +M+ K
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PD+V YNT++ C++ DA + L +M G PN V+Y T++ G C+ G D A
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ + M+ + P+ L+ G C G V EA V E + + G P+ T+ ++
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Query: 421 ICAGEEMEKLGEVLNEIV 438
C +M + +V +V
Sbjct: 488 YCLRCKMNEARKVFEIMV 505
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 209/447 (46%), Gaps = 61/447 (13%)
Query: 18 GAVTFPPKTPSLIFCY-----SSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQ 72
G F P PS +F + +S+ ++PS P++ + SNS + I S
Sbjct: 27 GIFPFLPYFPSFLFFHRHHITTSTFTKNPSLPKKNGGFA-SNSSNTI-----------SV 74
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
D L + Y + N R S + + + + K +S + + + + + + VT ++
Sbjct: 75 DDALASF----YRMARMNPRPSIVEFGKFLGSIAKMKQYSTV--VYLCNQMDLFGVTHTV 128
Query: 133 FTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
++ LI N D A+ + M + +P ++ V + ++ A +L+
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLING-VCNEGKIKVAVELYN 187
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ G P+ SYN ++ C +G+ ++A +F KM + G P+V +Y ++ LC+
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
VN A+D L +M+ +G PD ++Y ++++ LC +L EA +L RM+ GC PD+V YN
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307
Query: 311 -----------------------------------TVVLGFCREGRAIDACKVLEDMPSN 335
T++ G C G+ +A ++ + M
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC P++V+Y T++ LC + + A +++ M+ +G P+ ++ GFCN+G++DEA
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ +E++ P+ T+ ++V +C
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLC 454
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 167/358 (46%), Gaps = 39/358 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFR 154
TY I+I L + + + D L + + P P + TY ++ L + A++ F+
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIP--PDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 155 SMLEFNCKPLPKQLNRILELLVTHR----------------------------------N 180
M + CKP N I++ L R
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A LFK V+PNT +++I++ C G +S A +F M E+GV P++ +Y
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
LM G C + ++N A + E M+ KG PD SY L+N C +++ +A LL +M VK
Sbjct: 483 ALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK 542
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
P+ V YNT++ G C GR +DA ++ + M S+G LP L++Y L+ GLC G D A
Sbjct: 543 KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEA 602
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMI 417
K + M K P + LI+G GK++ A G+ +L G P T+ VMI
Sbjct: 603 LKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMI 660
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 1/276 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ A + F+ M + CKP N I++ L R + A D G+ P+ +Y
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR-LVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C+ G ++ A LF KM ++G PDV +Y ++ LC+ VN A++ L +M+++G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P+ ++Y+T+L+ C +L EA +L M + P+ + ++ +V G C+EG +A
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
V E M G PN+ +Y L+ G C + + A+K ++M+ KG +P + LI G+
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
CN ++D+A +L ++ P+ T+ I+ +C
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLC 559
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 3/270 (1%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY ++ NL D A + F+ M+ N P + +++ L + A
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC-QEGMVSEA 462
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ + GV PN +YN +M +C ++ A +F M +G PD+ SY IL+ G
Sbjct: 463 RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C ++++A LL M K P+T++Y T++ LC +L +A +L +M G P
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT 582
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y+ ++ G C+ G +A K+ + M P+++ Y L+ G+ G +VAK
Sbjct: 583 LMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFS 642
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ + G P + +IKG G DEA
Sbjct: 643 KLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P L +Y LI Y S D+A M P N I++ L + L A
Sbjct: 510 APDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLC-YVGRLLDAQ 568
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LFK G+LP +Y+I++ C +G + A LF M E+ + PD+ Y IL++G+
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGM 628
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ A L + G P +Y ++ L ++ EAY+L + K+
Sbjct: 629 FIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKM 681
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 192/381 (50%), Gaps = 2/381 (0%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
+P S V ++ Q P L F + +R+ +FR S T+ ++I L + F
Sbjct: 59 APFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGFDTYWK 117
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
IL LK+ + + P F+ LI YA+S + ++A+++F M +F CKP N IL ++V
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+L A ++ K PN ++ I++ C NG A +F++M ++G+ P+
Sbjct: 178 QKEVFLL-ALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y I++ GLC+ + + LL M G PD+++ LL+ C+ ++ EA+ LL
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ +G I Y++++ G R R + + M G P++V Y L+ G C+ GM
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A + M +G SP +ALIKGFC+VG +D+A + E+ K P T+ +
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416
Query: 417 IVPQICAGEEMEKLGEVLNEI 437
++ +C +++ ++ N++
Sbjct: 417 LICGMCRNGLLDEARQIFNQM 437
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ K G+ P+ Y I++R FC G + A + N M +RG+ PD Y L++G C
Sbjct: 330 RKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDV 389
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+++A L ++ P + +YT L+ +CR L EA ++ +M+ GC+P I+ +
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTF 449
Query: 310 NTVVLGFCREGRAIDACKVLEDMP-----------SNGC--LPNLVSYRTLVGGLCDQGM 356
N ++ G C+ G +A + M S G + + S +T+V LC+ G+
Sbjct: 450 NALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGL 509
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A K + + G P + LI GFC ++ A + EL G +P T+
Sbjct: 510 ILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGT 569
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ + E VL+++VK
Sbjct: 570 LIDGFHRVDREEDAFRVLDQMVK 592
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 184/440 (41%), Gaps = 18/440 (4%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+ PP T S++ + S + + E + K + + + ++ + LLA
Sbjct: 127 IQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLAL 186
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
+++ + N+ + +T++IL+ L + + + + P ++T ++
Sbjct: 187 AVYNQMLKL-NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSG 245
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
++ D + +M C P N +L+ + AF L + K G +
Sbjct: 246 LCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFC-KLGQIDEAFALLQLFEKEGYVL 304
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
K Y+ ++ KMF+ G+ PDV Y IL++G C V+ A+++L
Sbjct: 305 GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML 364
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
DM +G PDT Y L+ C L +A L + C P Y ++ G CR
Sbjct: 365 NDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRN 424
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSV 378
G +A ++ M + GC P+++++ L+ GLC G + A+ + ++ I K S +
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRL 484
Query: 379 SHA------------LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
S +++ C G + +A +L +L +G P T+ +++ C +
Sbjct: 485 SQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKN 544
Query: 427 MEKLGEVLNEIVKVEIKGDT 446
+ ++ E+ ++KG +
Sbjct: 545 INGAFKLFREL---QLKGHS 561
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 18/249 (7%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + Y LIK + + L D+A + + +C P IL + L A
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYT-ILICGMCRNGLLDEA 430
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP----------- 234
+F G P+ ++N ++ C G++ A LF KM E G P
Sbjct: 431 RQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGAD 489
Query: 235 ---DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
D S + +++ LC + +A LL + + G VPD ++Y L+N C+ K + A+
Sbjct: 490 RVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAF 549
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
KL +++KG +PD V Y T++ GF R R DA +VL+ M NGC P+ Y+ L+
Sbjct: 550 KLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS 609
Query: 352 CDQGMFDVA 360
C +G VA
Sbjct: 610 CRKGKLSVA 618
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 2/265 (0%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
++++++ A+ +G A F KM + G PDV +Y ++ + +K A+ + M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L + P+ ++ LLN LC+ K +A K+ M KG P+ + Y ++ G C+ R
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
D ++L M +GC P+ ++ L+ G C G D A +QL +G+ +L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I G + DE ++ KAG P + +++ C ++ +LN++ + +
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Query: 443 KGDTRIVEAGI-GLEDY-LIGKTRS 465
DT A I G D L+ K RS
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARS 397
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ +L+ + +AV+ M + G PD +Y ++L+ + +K+ A + +M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
NP+ + ++ G C+ G+ DA K+ ++M G PN + Y ++ GLC
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D + + M G P +AL+ GFC +G++DEA +L+ K G + +
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAG---IGLEDYLIGKTRSRPRR 469
+ + + +++ E ++ K I+ D I+ G +G+ DY + +R
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 34/256 (13%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ L GV+P+ +YN+++ FC +I+ A+ LF ++ +G PD +Y L+
Sbjct: 513 AYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID 572
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL----------- 293
G R + A +L+ M+ G P + Y L+ CRK KL A+ L
Sbjct: 573 GFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQ 632
Query: 294 -----------------------LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
L M K N +I Y ++G C+ R+ +A K+
Sbjct: 633 EDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFL 692
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ N S L+ GLC G ++A + KGF + + L++
Sbjct: 693 VLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQD 752
Query: 391 KVDEACGVLEELLKAG 406
K+ A +L + AG
Sbjct: 753 KMKHALDLLNRMNSAG 768
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 3/308 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI ++N D A K M E P N +L L +N L
Sbjct: 160 PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLC-KQNQLEEVSK 218
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G P+T SYN ++ C +G A + KM E+ PDV +Y LM G C
Sbjct: 219 LLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFC 278
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ S+++ A LLEDM+ + P ++YTTL+ R +L +AY+++ M G +PD+V
Sbjct: 279 KVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLV 338
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G C+ G+ +A ++LE M C P++V+Y LV GLC G D A+ +++M
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G P+ + +I GFC GKVDE VLE + + P T+ ++ C M
Sbjct: 399 LERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRM 458
Query: 428 EKLGEVLN 435
+ +L
Sbjct: 459 QDAFAILG 466
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 175/354 (49%), Gaps = 7/354 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
SNSTY LI RA ++ +I + + + +P + T+ ++K Y + DRAL
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLARRF--SPDVITHNTILKAYCQIGDLDRALS 80
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
FR + C P ++ L + + A+ L + P+ YN ++
Sbjct: 81 HFRG--KMWCSPTAFTYCILIHGLCQCQR-IDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G I A + M ER +PDV +Y L+ G C+ + ++ A L+E M G PDT
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDT 197
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y LLN LC++ +L E KLL M G PD YNTVV C G+ +A K+LE
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M C P++V+Y +L+ G C D A++ ++ M+ + +P LI GF +
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ +A V+E++ KAG +P T+ ++ +C ++E+ E+L +V+ + D
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 9/307 (2%)
Query: 129 TPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P+ FTY I I+ + D A + M++ +C P N ++ L + A
Sbjct: 89 SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC-KMGKIDAAR 147
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ K + +P+ +Y ++ C + A L KM E G+ PD +Y L+ GL
Sbjct: 148 NVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGL 207
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+++Q+ LLE+M+ G PDT SY T++ LC K EA K+L +M K C PD+
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN+++ GFC+ + +A ++LEDM C P +++Y TL+GG A + M+
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M G SP + L+ G C GK++EA +LE +++ AP T+ ++V +C
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC---- 383
Query: 427 MEKLGEV 433
KLG+V
Sbjct: 384 --KLGKV 388
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 182/357 (50%), Gaps = 15/357 (4%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAE 142
A R+P+ S +T + + + G+ + I + +I K P + TY L+ + +
Sbjct: 226 AGREPD-TFSYNTVVACLCESGKYEEAGKILEKMIEKK-----CGPDVVTYNSLMDGFCK 279
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ D A + M+ C P ++ + + L A+ + + K G+ P+
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGF-SRADRLADAYRVMEDMFKAGISPDLV 338
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ C G + A+ L M E+ PDV +Y IL+ GLC+ +V+ A LLE M
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L +G P+ +++ T+++ C+ K+ E +K+L MK C PD+V Y+T++ G+C+ R
Sbjct: 399 LERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRM 458
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA +L G P+ SY +++ GLC G + A++ M LM +G P S +
Sbjct: 459 QDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALI 512
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
I G C+V + DEA +L+ + + G P+ T+ +++ +C + +E VL+ +++
Sbjct: 513 IGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 156/341 (45%), Gaps = 11/341 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI RA L D + ++P L TY L+ ++ + A +
Sbjct: 304 TYTTLIGGFSRAD--RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E +C P + ++ L + A L + + G PN ++N M+ FC
Sbjct: 362 VMVEKDCAPDVVTYSILVNGLC-KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + + + M E PDV +Y L+ G C+ +++ A +L G PD SY
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASY 474
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+++L LC K+ EA +++ M +GC P HY ++ G C R +A K+L+ M
Sbjct: 475 SSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSE 534
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC PNL +Y L+ GLC + A + +M+ KG P + +LI GFC + K+D
Sbjct: 535 RGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDA 594
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
A + + +G P + + +++ C +EK EV+
Sbjct: 595 AYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 135/260 (51%), Gaps = 4/260 (1%)
Query: 182 LRP--AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+RP + F+ P+ +Y ++ F G+ + + N+M R PDV ++
Sbjct: 3 VRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITH 62
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+++ C+ ++RA+ + P +Y L++ LC+ +++ EAY+LL M
Sbjct: 63 NTILKAYCQIGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K C+PD YN ++ G C+ G+ A VL+ M C+P++++Y +L+ G C D
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A+K M+ M G +P +AL+ G C +++E +LEE+++AG P ++ +V
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVA 240
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+C + E+ G++L ++++
Sbjct: 241 CLCESGKYEEAGKILEKMIE 260
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 146/293 (49%), Gaps = 13/293 (4%)
Query: 97 TYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
TY IL+ KLG+ L+ ++++ + VT F +I + ++ D K
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVT---FNTMIDGFCKAGKVDEGHKVL 430
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M E +C P + +++ N ++ AF + G+ P+ SY+ M+ C
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYC-KANRMQDAFAIL------GISPDKASYSSMLEGLCS 483
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A + + M ++G P Y +++ GLC + + A+ +L+ M +G P+ +
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYT 543
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ L+N LC+ K++ +A +L M KGC PD+ Y +++ GFC+ + A + + M
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+GC P+ ++Y L+ G C G + A + MQLM+ KG +P + +L++
Sbjct: 604 DSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 9/288 (3%)
Query: 129 TPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY I + L D A MLE C+P N +++ +
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC-KAGKVDEGH 427
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + + P+ +Y+ ++ +C + A+ + G+ PD SY +++GL
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGL 481
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C +V A ++++ M +G P + Y ++ LC ++ EA K+L M +GC P++
Sbjct: 482 CSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL 541
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y+ ++ G C+ R DA VL+ M GC+P++ +Y +L+ G C D A + +
Sbjct: 542 YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKT 601
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M G P + LI GFC G V++A V++ +L+ G P T+
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
Y+ F + F P +Y L+ G R +++ +ML + F PD +++ T+L
Sbjct: 8 GYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILK 67
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+ C+ L A R K+ C+P Y ++ G C+ R +A ++L++M C P
Sbjct: 68 AYCQIGDLDRALSHF-RGKM-WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHP 125
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ Y L+ GLC G D A+ +++M+ + P +LI G C +DEA ++
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E++ ++G P + ++ +C ++E++ ++L E+V+ + DT
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P+ +Y L+ G G + + M+++ FSP + ++K +C +G +D A
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
K +P T+ +++ +C + +++ ++L+E+++ + D +
Sbjct: 82 FRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 192/381 (50%), Gaps = 2/381 (0%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
+P S V ++ Q P L F + +R+ +FR S T+ ++I L + F
Sbjct: 59 APFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGFDTYWK 117
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
IL LK+ + + P F+ LI YA+S + ++A+++F M +F CKP N IL ++V
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+L A ++ K PN ++ I++ C NG A +F++M ++G+ P+
Sbjct: 178 QKEVFLL-ALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y I++ GLC+ + + LL M G PD+++ LL+ C+ ++ EA+ LL
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ +G I Y++++ G R R + + M G P++V Y L+ G C+ GM
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A + M +G SP +ALIKGFC+VG +D+A + E+ K P T+ +
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416
Query: 417 IVPQICAGEEMEKLGEVLNEI 437
++ +C +++ ++ N++
Sbjct: 417 LICGMCRNGLLDEARQIFNQM 437
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 173/410 (42%), Gaps = 9/410 (2%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+ PP T S++ + S + + E + K + + + ++ + LLA
Sbjct: 127 IQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLAL 186
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
+++ + N+ + +T++IL+ L + + + + P ++T ++
Sbjct: 187 AVYNQMLKL-NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSG 245
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
++ D + +M C P N +L+ + AF L + K G +
Sbjct: 246 LCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFC-KLGQIDEAFALLQLFEKEGYVL 304
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
K Y+ ++ KMF+ G+ PDV Y IL++G C V+ A+++L
Sbjct: 305 GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML 364
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
DM +G PDT Y L+ C L +A L + C P Y ++ G CR
Sbjct: 365 NDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRN 424
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSV 378
G +A ++ M + GC P+++++ L+ GLC G + A+ + ++ I K S +
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRL 484
Query: 379 SHALIK------GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
S + GF V + ++A VL++++K G P + ++ C
Sbjct: 485 SQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSC 534
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 2/265 (0%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
++++++ A+ +G A F KM + G PDV +Y ++ + +K A+ + M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L + P+ ++ LLN LC+ K +A K+ M KG P+ + Y ++ G C+ R
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
D ++L M +GC P+ ++ L+ G C G D A +QL +G+ +L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I G + DE ++ KAG P + +++ C ++ +LN++ + +
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Query: 443 KGDTRIVEAGI-GLEDY-LIGKTRS 465
DT A I G D L+ K RS
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARS 397
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ K G+ P+ Y I++R FC G + A + N M +RG+ PD Y L++G C
Sbjct: 330 RKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDV 389
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+++A L ++ P + +YT L+ +CR L EA ++ +M+ GC+P I+ +
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTF 449
Query: 310 NTVVLGFCREG------------------------------------------RAIDACK 327
N ++ G C+ G R DA +
Sbjct: 450 NALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFR 509
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
VL+ M NGC P+ Y+ L+ C +G VA
Sbjct: 510 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVA 542
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ +L+ + +AV+ M + G PD +Y ++L+ + +K+ A + +M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
NP+ + ++ G C+ G+ DA K+ ++M G PN + Y ++ GLC
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D + + M G P +AL+ GFC +G++DEA +L+ K G + +
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAG---IGLEDYLIGKTRSRPRR 469
+ + + +++ E ++ K I+ D I+ G +G+ DY + +R
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR 370
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 134/385 (34%), Gaps = 77/385 (20%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y LI L RAK + + + + L+T LI+ + E + D AL M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+ P N +++ L A L K+ P + +Y I++ C NG +
Sbjct: 369 QRGLSPDTYCYNALIKGFC-DVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLL 427
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA---------------------- 255
A +FN+M G P + ++ L+ GLC+ ++ A
Sbjct: 428 DEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQG 487
Query: 256 -------------VD-------LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL-- 293
VD +L+ M+ G P + Y L+ CRK KL A+ L
Sbjct: 488 ADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWL 547
Query: 294 --------------------------------LCRMKVKGCNPDIVHYNTVVLGFCREGR 321
L M K N +I Y ++G C+ R
Sbjct: 548 KYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARR 607
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ +A K+ + N S L+ GLC G ++A + KGF + +
Sbjct: 608 SEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQ 667
Query: 382 LIKGFCNVGKVDEACGVLEELLKAG 406
L++ K+ A +L + AG
Sbjct: 668 LLRSLILQDKMKHALDLLNRMNSAG 692
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 184/375 (49%), Gaps = 18/375 (4%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS----LIDDILITLKS 123
L+ QSD + A F++ + S Y +++ L +K F + ++++ +K
Sbjct: 103 LLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKD 162
Query: 124 EHYPV-------------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
V P +F L+K Y ++ + +TF +LE P N
Sbjct: 163 TDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNY 222
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L L+ N++ + ++ + GV+PN+ ++NI+ FC +GDI KM E
Sbjct: 223 LLNGLLK-SNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEE 281
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y L+ G C + +++ A L M + +PD +SYT L+N LC++ ++REA
Sbjct: 282 GFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREA 341
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++LL RM +G NPD+V YNT++ G+C+EG+ +++ +L +M NG P+ + R L+ G
Sbjct: 342 HQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQG 401
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A + + G S + L+ C + A +LE + + G PH
Sbjct: 402 YRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPH 461
Query: 411 EDTWVMIVPQICAGE 425
+ + ++ +C G+
Sbjct: 462 VEIYNKLIESLCKGD 476
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 35/297 (11%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R L AF L++ ++ VLP+ SY +M C G + A+ L ++M RG+ PDV S
Sbjct: 300 RGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVS 359
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS------------------------- 273
Y L+ G C++ ++ + LL +M+ G PD+ +
Sbjct: 360 YNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELE 419
Query: 274 ----------YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
Y L+ SLC + + A LL RM +G P + YN ++ C+
Sbjct: 420 KFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVA 479
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA + ++ PNL++Y+ L+ LC G A+K M+ M+ G P + A+I
Sbjct: 480 DALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMI 539
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
G+C +A +L K + +++ +V +C ++ K E+ ++KV
Sbjct: 540 HGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKV 596
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 7/218 (3%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A +L K GV + Y+ ++ + C A TL +M +RG +P VE Y
Sbjct: 407 WLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYN 466
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++ LC+ V A+ L +++ P+ L+Y L+ LCR + EA KL+ M
Sbjct: 467 KLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHF 526
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD ++ G+CRE A A +L + + SY TLV +C+ G DVA
Sbjct: 527 GLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDG--DVA 584
Query: 361 KKYMQL---MISKGFSPHFSVSHALIKGF-CNVGKVDE 394
K+M+L M+ GF+P+ +I G NVG V E
Sbjct: 585 -KFMELQERMLKVGFAPNSLTCKYMIDGLRKNVGLVKE 621
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ + + +L G+VP ++ LLN L + + + + M
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG 244
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+ +N + FC++G LE M G P++V+Y TL+ G C +G
Sbjct: 245 RVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLS 304
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++M + P AL+ G C G+V EA +L ++ G P ++ ++
Sbjct: 305 DAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLI 364
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLEDYLI 460
C +M + +L E++ I D+ R++ G E +LI
Sbjct: 365 CGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLI 409
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++++ L+ ++P ++ YL+ E + P A M + P + N+++E L
Sbjct: 413 NLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESL 472
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + A L + PN +Y ++R C G A L +M G+ PD
Sbjct: 473 CKG-DCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPD 531
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
E R ++ G CR+ +A LL + + D+ SY+TL+ +C + + +L
Sbjct: 532 PEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQE 591
Query: 296 RMKVKGCNPD 305
RM G P+
Sbjct: 592 RMLKVGFAPN 601
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 18/245 (7%)
Query: 220 AYTLFNKM-FERGVMPDVESYRILMQGLCRKSQVNRAVDLL-----------EDMLNKGF 267
A T FN + + G+ P +Y +++ L + +A+ L ED+ F
Sbjct: 113 ALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLF 172
Query: 268 V------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
+ D + + LL + + ++E ++ ++ G P ++ N ++ G +
Sbjct: 173 LCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNH 232
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
V +M G +PN ++ L C G D +++ M +GF P +
Sbjct: 233 IHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNT 292
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI G+C G++ +A + + + P ++ ++ +C + + ++L+ +V
Sbjct: 293 LINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRG 352
Query: 442 IKGDT 446
+ D
Sbjct: 353 LNPDV 357
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 188/406 (46%), Gaps = 20/406 (4%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS-----------LIDD 116
L+ QSD A F++ R S Y I++ L ++ FS L+ D
Sbjct: 152 LLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKD 211
Query: 117 IL--------ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L + L +E P +F L+K Y L++FR ML P
Sbjct: 212 DLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 271
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +L L+ NY +++++ + G+ PN ++NI+ C +GD KM
Sbjct: 272 NYLLNGLLK-LNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKME 330
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E G PD+ +Y L+ CRK +++ A L + M +G VPD +SYT L+N LC++ ++R
Sbjct: 331 EEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVR 390
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA++L RM +G +PDIV YNT++ G+C+EG+ ++ +L DM NG P+ + LV
Sbjct: 391 EAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLV 450
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G +G F A + + G S + LI C + A +LE + + G
Sbjct: 451 EGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHK 510
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ + ++ C + + + + E+V EIK + A JG
Sbjct: 511 XELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJG 556
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 3/332 (0%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + + P+L+T+ L + + + K M E P N ++ +
Sbjct: 295 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINS-YCRKGR 353
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF L+K ++ GV+P+ SY +M C G + A+ LF++M RG+ PD+ +Y
Sbjct: 354 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 413
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ ++ + LL DM+ G PD+ + L+ ++ K A L+ ++ G
Sbjct: 414 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 473
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y+ +++ CRE R A +LE M +G L Y L+ C A
Sbjct: 474 VSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEAL 533
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ K P+ + A+J + + E ++ E++ +G P + +
Sbjct: 534 LLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGY 593
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +++K +L+ K DT A I
Sbjct: 594 CRENDIDKAESLLSFXAKEFQIHDTESFNALI 625
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + GV + Y+ ++ A C A L +M + G ++E Y L++
Sbjct: 462 ALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIK 521
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C+ + A+ L +M++K P+ +Y +J L R + E L+ M G P
Sbjct: 522 SFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLP 581
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ + G+CRE A +L + + S+ L+ +G + +
Sbjct: 582 DLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQ 641
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+M+ G P+ +I G +VD A
Sbjct: 642 DMMLKMGLLPNPLTCKYVIDGLWKARRVDSA 672
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 204/381 (53%), Gaps = 14/381 (3%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P + LI+ Q DP L+ +IF +A P+ H+ L LKL RA+ F ++ +L
Sbjct: 55 TPHNLASLISRQHDPDLSLQIFHHA--HPSLSHAPQPLHALFLKLSRARRFYHLESLLTH 112
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP-KQLNRILELLVTHR 179
L + T LI+ Y + P AL+ F L+F +PL + LN +L LV ++
Sbjct: 113 LPNP---PPEPPLTTLIRAYGLAGKPLSALRIF---LKF--QPLGVRSLNALLNALVQNK 164
Query: 180 NYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ R A +FKS+ K ++PN S NI+++A C ++ +A + ++M G++P+V S
Sbjct: 165 RH-RLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVS 223
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G K + A+ + ++L+KG++PD SYT L++ CR KL +A +++ M+
Sbjct: 224 YSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLME 283
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P V Y ++ +C+ + +A +LEDM G +P+ V +V LC++G +
Sbjct: 284 ENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVE 343
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + ++ KG+ +V ++ C GKV EA GVL+EL K GE T+ ++
Sbjct: 344 RACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELEK-GEVASLMTYNTLI 402
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+C ++ + G + +E+V+
Sbjct: 403 AGMCERGQLCEAGRLWDEMVE 423
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + + G++P++ ++ C G + A ++ + +G ++
Sbjct: 310 AVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVH 369
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC++ +V A +L D L KG V ++Y TL+ +C + +L EA +L M KG P
Sbjct: 370 WLCKEGKVVEARGVL-DELEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVP 428
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+ YN ++ GFC+ G +A +VLE+M +GCLPN ++ LV G+ G
Sbjct: 429 NAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSG 479
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 154/300 (51%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A + FR M+ P N I+ +V+ + L + K G+ PN +YN
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGD-LEKGLGFMRKMEKEGISPNVVTYNT 247
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ A C + A L M GV ++ SY ++ GLC K +++ +L+E+M KG
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VPD ++Y TL+N C++ L + LL M KG +P++V Y T++ C+ G A
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ + M G PN +Y TL+ G C +G+ + A K + MI GFSP +AL+ G+
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C +G+V EA G+L +++ G P ++ ++ C E+ K ++ E+V+ + DT
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 3/320 (0%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E ++P++ TY LI + A+ R+M N ++ L +
Sbjct: 232 KMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG-K 290
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ +L + G++P+ +YN ++ FC G++ L ++M +G+ P+V +Y
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTY 350
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ +C+ ++RAV++ + M +G P+ +YTTL++ C+K + EAYK+L M V
Sbjct: 351 TTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIV 410
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G +P +V YN +V G+C GR +A +L M G P++VSY T++ G C +
Sbjct: 411 SGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGK 470
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M+ KG P +LI+G C K+ EA + E+++ G P E T+ ++
Sbjct: 471 AFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLIN 530
Query: 420 QICAGEEMEKLGEVLNEIVK 439
C E+ K + +E+V+
Sbjct: 531 AYCVDGELSKALRLHDEMVQ 550
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 184/384 (47%), Gaps = 33/384 (8%)
Query: 68 LIASQSDPLLAKEIFDYASRQP---NFRHSN-----STYLILILKLGRAKYFSLIDDILI 119
L+ SQSD +A Q NF + + ++++ KL R + SL D+
Sbjct: 46 LLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALHILVRFKLYRTAH-SLAADLAA 104
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
TL P SLF +L + + P F S F+ + K L+R+
Sbjct: 105 TLPD---PTGASLFRHLHDTFHLCSSP------FSSSAVFDL--VVKSLSRL-------- 145
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYN-----IMMRAFCFNGDISIAYTLFNKMFERGVMP 234
++ A L A++HG P SYN ++ R+ + D A +F M GV P
Sbjct: 146 GFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSP 205
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V +Y ++++G+ + + + + + M +G P+ ++Y TL+++ C+KKK++EA LL
Sbjct: 206 NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL 265
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M V G +++ YN+V+ G C +GR + +++E+M G +P+ V+Y TLV G C +
Sbjct: 266 RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKE 325
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G + M+ KG SP+ LI C G + A + +++ G P+E T+
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385
Query: 415 VMIVPQICAGEEMEKLGEVLNEIV 438
++ C M + +VL+E++
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMI 409
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 157/319 (49%), Gaps = 18/319 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY LI ++ RA++ F M +P + +++ + + A
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFC-QKGLMNEA 401
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + G P+ +YN ++ +CF G + A + M ERG+ PDV SY ++ G
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR+ ++ +A + E+M+ KG +PDT++Y++L+ LC ++KL EA+ L M +G PD
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM- 364
V Y +++ +C +G A ++ ++M G LP+ V+Y L+ GL + VAK+ +
Sbjct: 522 EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLL 581
Query: 365 --------------QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+I + F L+KGFC G ++EA V + +L+ P+
Sbjct: 582 KLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPN 641
Query: 411 EDTWVMIVPQICAGEEMEK 429
+ +++ G + K
Sbjct: 642 AAIYNLMIHGHSRGGNVHK 660
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 124/223 (55%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +Y ++ C G++S A +F++M RG+ P+ +Y L+ G C+K +N A
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M+ GF P ++Y L++ C +++EA +L M +G PD+V Y+TV+ G
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FCRE A ++ E+M G LP+ V+Y +L+ GLC Q A + M+ +G P
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+LI +C G++ +A + +E+++ G P T+ +++
Sbjct: 522 EVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++F G+ PN ++Y ++ FC G ++ AY + ++M G P V +Y
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C +V AV +L M+ +G PD +SY+T++ CR+++L +A+++ M KG
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y++++ G C + + ++A + +M G P+ V+Y +L+ C G A
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M+ +GF P LI G + A +L +L P + T+ ++
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN- 601
Query: 422 CAGEEMEKL 430
C+ E + +
Sbjct: 602 CSNNEFKSV 610
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 160/384 (41%), Gaps = 56/384 (14%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A EIFD R R + TY LI + + +L + + +PS+ TY
Sbjct: 366 AVEIFDQM-RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF--SPSVVTYNA 422
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ Y A+ R M+E P + ++ R L AF + + +
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERE-LGKAFQMKEEMVEK 481
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GVLP+T +Y+ +++ C + A+ LF +M RG+ PD +Y L+ C ++++A
Sbjct: 482 GVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKA 541
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV--- 312
+ L ++M+ +GF+PD ++Y+ L+N L +K + + A +LL ++ + PD V YNT+
Sbjct: 542 LRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN 601
Query: 313 ------------VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG---------- 350
V GFC +G +A +V + M PN Y ++ G
Sbjct: 602 CSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKA 661
Query: 351 -------------------------LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
L +GM D + +Q ++ V+ L++
Sbjct: 662 YNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEV 721
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
G +D VL E+ K G P
Sbjct: 722 NFKEGNMDAVLNVLTEMAKDGLLP 745
>gi|356531124|ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Glycine max]
Length = 502
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 200/394 (50%), Gaps = 10/394 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P + ++I +Q +PL A IF+ A SR PN+ H+ Y +I LG + + + D++
Sbjct: 10 TPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGRLNEMRDVIE 69
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+K + S+F +IK YA + L D A+ ++S+ FNC + N +L+++V
Sbjct: 70 QMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNTMLQIMVKE- 128
Query: 180 NYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N L A LF +S+ V ++ N++M A C +A LF +M + P+ +S
Sbjct: 129 NRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQSCYPNRDS 188
Query: 239 YRILMQGLCRKSQVNRAVDLLEDML----NKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
Y ILM+GLC+ +++ A LL M KG D + Y TLL++LC K EA ++L
Sbjct: 189 YAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGKFEEAEEIL 248
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCD 353
++ KG ++ + L +G+ I++ K ++ + G +P+L SY + L
Sbjct: 249 GKILRKGLKAPKRCHSRLDLDQLSDGKDIESAKRMIHEALIKGSVPSLASYNAMAVDLYS 308
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE-LLKAGEAPHED 412
+G D A K + M +GF P S+ A + C V KVDEA V+EE ++K P
Sbjct: 309 EGKIDEADKVIIEMQVRGFKPTHSIFEAKVAALCKVSKVDEAIKVIEEDMVKVNCLPTAK 368
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEI-VKVEIKGD 445
+ +++ +C + E LN++ KV GD
Sbjct: 369 VYNILLKNLCNVGNSTAILESLNKMSSKVGCTGD 402
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + A G +P+ SYN M G I A + +M RG P +
Sbjct: 277 IESAKRMIHEALIKGSVPSLASYNAMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSIFEA 336
Query: 242 LMQGLCRKSQVNRAVDLLE-DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ LC+ S+V+ A+ ++E DM+ +P Y LL +LC + L +M K
Sbjct: 337 KVAALCKVSKVDEAIKVIEEDMVKVNCLPTAKVYNILLKNLCNVGNSTAILESLNKMSSK 396
Query: 301 -GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC D Y+ ++ C E R ++A ++LE M P SY +L+ GLC G
Sbjct: 397 VGCTGDRDTYSILLEMLCGERRYLEASQLLEKMSIKSYWPCTNSYNSLIRGLCSIGRQYE 456
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
A +++ MIS+G P SV ++L FCN K+
Sbjct: 457 AVMWLEDMISQGKLPEISVWNSLASLFCNSEKI 489
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK-MFERGVMPDVESYRILMQGLCRKSQVN 253
G P + + A C + A + + M + +P + Y IL++ LC
Sbjct: 325 RGFKPTHSIFEAKVAALCKVSKVDEAIKVIEEDMVKVNCLPTAKVYNILLKNLCNVGNST 384
Query: 254 RAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++ L M +K G D +Y+ LL LC +++ EA +LL +M +K P YN++
Sbjct: 385 AILESLNKMSSKVGCTGDRDTYSILLEMLCGERRYLEASQLLEKMSIKSYWPCTNSYNSL 444
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ G C GR +A LEDM S G LP + + +L C+ V+ +
Sbjct: 445 IRGLCSIGRQYEAVMWLEDMISQGKLPEISVWNSLASLFCNSEKIKVSSE 494
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR-SMLEFNCKPLPKQLNRILE 173
D ++I ++ + T S+F + + + D A+K M++ NC P K N +L+
Sbjct: 316 DKVIIEMQVRGFKPTHSIFEAKVAALCKVSKVDEAIKVIEEDMVKVNCLPTAKVYNILLK 375
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
L N L K + K G + +Y+I++ C A L KM +
Sbjct: 376 NLCNVGNSTAILESLNKMSSKVGCTGDRDTYSILLEMLCGERRYLEASQLLEKMSIKSYW 435
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P SY L++GLC + AV LEDM+++G +P+ + +L + C +K++ + +
Sbjct: 436 PCTNSYNSLIRGLCSIGRQYEAVMWLEDMISQGKLPEISVWNSLASLFCNSEKIKVSSET 495
Query: 294 LCRMK 298
R++
Sbjct: 496 FSRLR 500
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 135/231 (58%), Gaps = 3/231 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN M+ +C G + A L M + PD +Y L++GLC + + A+ +
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+DML +G VPD ++YT LL + C++ ++A KLL M+ KGC PDI+ YN VV G C+
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EGR DA + L+ +PS+GC PN VSY ++ GLC ++ A+K M M KG+ P+
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ LI C G V+ A VL+++ K G P+ ++ I+ C ++M++
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 349
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 145/268 (54%), Gaps = 5/268 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G +P+ +Y I++ A C A L ++M +G PD+ +Y +++ G+C++ +V+
Sbjct: 184 RRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVD 243
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++ L+ + + G P+T+SY +L LC ++ +A KL+ M KG P++V +N ++
Sbjct: 244 DAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLI 303
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
CR G A +VL+ +P GC PN +SY ++ C Q D A +++LM+S+G
Sbjct: 304 SFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCY 363
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGE 432
P + L+ C G+VD A +L +L G P ++ ++ + AG+ E L E
Sbjct: 364 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL-E 422
Query: 433 VLNEIVKVEIKGDT---RIVEAGIGLED 457
+LNE+V ++ D + +G+ ED
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCRED 450
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 13/336 (3%)
Query: 97 TYLILILKL-GRAK---YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RAL 150
TY LI L GR + ++DD+L P + TY I + A +A+
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDML------RRGCVPDVVTYTILLEATCKRSGYKQAM 211
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K M C P N ++ + + A + KS HG PNT SYNI+++
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNG-ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKG 270
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A L +M ++G P+V ++ +L+ LCR+ V A+++L+ + G P+
Sbjct: 271 LCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPN 330
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+LSY +L++ C++KK+ A + M +GC PDIV YNT++ CR G A ++L
Sbjct: 331 SLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLH 390
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ GC P L+SY T++ GL G A + + M++KG P + G C
Sbjct: 391 QLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRED 450
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+++EA ++ G P+ + I+ +C E
Sbjct: 451 RIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRE 486
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 3/327 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P+ P +TY LI+ AL ML C P +LE Y +
Sbjct: 151 PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGY-KQ 209
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L G P+ +YN+++ C G + A + G P+ SY I+++
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A L+ +M KG+ P+ +++ L++ LCR+ + A ++L ++ GC P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN ++ FC++ + A +E M S GC P++VSY TL+ LC G D A + +
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ KG +P + +I G GK EA +L E++ G P T+ I +C
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+ +E+ ++ + I+ +T + A
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNA 476
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 169/331 (51%), Gaps = 3/331 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY ++ + D A++ +S+ C+P N +L+ L T + A
Sbjct: 223 APDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERW-EDAE 281
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G PN ++N+++ C G + A + +++ + G P+ SY ++
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAF 341
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++RA+ +E M+++G PD +SY TLL +LCR ++ A +LL ++K KGC P +
Sbjct: 342 CKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L +M + G P++++Y T+ GLC + + A +
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G P+ + +A++ G C + A + ++ G P+E T+ +++ +
Sbjct: 462 VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL 521
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
+++ E+L E+ + I +A I L D
Sbjct: 522 VKEARELLGELCSRGVVSKGLINKAAIRLLD 552
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 4/296 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD + LKS + P+ +Y ++K + + A K M + P N
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L R + PA ++ K+G PN+ SYN ++ AFC + A M R
Sbjct: 302 LISFLC-RRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ AV+LL + +KG P +SY T+++ L + K +EA
Sbjct: 361 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEA 420
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CRE R +A + + G PN V Y ++ G
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLG 480
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
LC + A MIS G P+ S LI+G G V EA +L EL G
Sbjct: 481 LCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 144/288 (50%), Gaps = 1/288 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y I++ L A+ + + ++ + + YP F LI L + A++ +
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ C P N IL + R A + G P+ SYN ++ A C G+
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDR-AMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +++ ++G P + SY ++ GL + + A++LL +M+ KG PD ++Y+T
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+ + LCR+ ++ EA + C+++ G P+ V YN ++LG C+ +A + M SNG
Sbjct: 442 ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
C+PN +Y L+ GL +G+ A++ + + S+G ++ A I+
Sbjct: 502 CMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIR 549
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 50/287 (17%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A F S+H + LP TK R + ++ + N + R V D ++
Sbjct: 17 ALPTFASSHPYPSLPTTKPLTPNSRLNFAHAGVAASP---NAVPHRAVSND------RLR 67
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLS--YTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
GL R+ + A+ L+E M G P L+ LC + EA ++L C
Sbjct: 68 GLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AAC 120
Query: 303 NPDIVHYNTVVLGF--------------------------------CREGRAIDACKVLE 330
PD++ YN +V G+ C GR +A VL+
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLD 180
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
DM GC+P++V+Y L+ C + + A K + M +KG +P + ++ G C G
Sbjct: 181 DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+VD+A L+ L G P+ ++ +++ +C E E +++ E+
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 196/414 (47%), Gaps = 14/414 (3%)
Query: 25 KTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDY 84
+ PS+ F S++ P+ + +E KS + V K + + D LA E F
Sbjct: 14 RKPSIPFVLSTNP--VPNLKAENEE------KSSVLKEADVLKRLKHEHDITLALEYFKS 65
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+ +F+H+ TY ++I KL + + +L +K E + LF +I Y +
Sbjct: 66 IANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAG 125
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++ALKTF M +F KP K N IL+ L+ N + ++ + K G+ PN +Y
Sbjct: 126 SSEQALKTFYRMQDFRVKPTVKIYNHILDALLD-ENRFQMINPIYSNMKKDGMEPNVFTY 184
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI+++A C N + A+ L +M +G PD SY L+ LC+ +V A +L
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELA----- 239
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
F P Y L+N +C++ EA++LL M KG +P+++ Y T++ G
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+ VL M + GC PNL ++ +L+ G +G A + MI +G P+ +AL+
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G C+ + +A V ++ G P+ T+ ++ +++ EV N ++
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 36/365 (9%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F +I+ I +K + + P++FTY L+K ++N D A K M C P
Sbjct: 162 FQMINPIYSNMKKD--GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSY 219
Query: 169 NRILELL-----------------------------VTHRNYLRPAFDLFKSAHKHGVLP 199
++ L V AF L G+ P
Sbjct: 220 TTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDP 279
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY ++ A G++ ++ + KMF RG P++ ++ L++G K + A+D
Sbjct: 280 NVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M+ +G VP+ ++Y L++ LC K+ L +A + +M++ GC P++ Y+ ++ G+ +
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G A +V M ++GC PN+V+Y +V LC MF+ A ++ M + P+
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ IKG C G+VD A V +++ +G P+ T+ ++ + + GE +
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD---RRFGEAFGLVKD 516
Query: 440 VEIKG 444
+E +G
Sbjct: 517 MEHRG 521
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 149/314 (47%), Gaps = 9/314 (2%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F L+D+++ + + P++ +Y +I +++ + +L M C P
Sbjct: 266 FQLLDEMM------NKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
+++ + A D + + GV+PN +YN +M C + A ++FN+M
Sbjct: 320 TSLIKGFFL-KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G P+V +Y L+ G + ++ A ++ M+ G P+ ++YT +++ LCR
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+AY L+ M+V+ C P+ V +NT + G C GR A KV + M ++GC PN +Y L+
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
L F A ++ M +G + + +I G+C G + EA +L +++ G
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558
Query: 409 PHEDTWVMIVPQIC 422
P T +++ C
Sbjct: 559 PDAITVNIVIDAYC 572
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +++ HG PN +Y M+ C N + AY L M P+ ++
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++GLC +V+ A+ + + M N G P+T +Y LL+SL + ++ EA+ L+ M+ +G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
++V YNT++ G+C G +A ++L M G P+ ++ ++ C QG ++A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M + + + P +LI G C V+EA L +L G +P+ TW ++V +
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 154/298 (51%), Gaps = 5/298 (1%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
SL D + + + E P++ TY LI YA++ D A + + M+ C P
Sbjct: 366 SLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYT 425
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
++++L + + A+ L ++ PNT ++N ++ C +G + A +F++M
Sbjct: 426 CMVDVLCRNSMF-NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G P+ +Y L+ L + + A L++DM ++G + ++Y T++ C L E
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A +LL +M V+G PD + N V+ +C++G+ A ++++ + + P++++Y +L+
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG-FCNVGKVDEACGVLEELLKAG 406
G+C + A Y++ M+S+G SP+ + + L++ F N+G A L+ +L +G
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGH-SGAVQFLDAVLGSG 661
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
Y ++ L R F+ ++ ++ E+ P F IK S D A+K F M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N +L+ L+ R + AF L K G+ N +YN ++ +C G
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRF-GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L KM RG PD + I++ C++ +VN A+ L++ + + PD ++YT+
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
L++ +C + EA L RM +G +P++ +N +V
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T ++ + +++ ++A +M NC P N ++ L + A +F
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCG-SGRVDWAIKVFDQM 482
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PNT +YN ++ + + A+ L M RG+ ++ +Y ++ G C +
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A++LL M+ +G PD ++ ++++ C++ K+ A +L+ R+ +PDI+ Y ++
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C +A L M S G PN+ ++ LV L A +++ ++ GF
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662
Query: 373 SPHF 376
F
Sbjct: 663 ETRF 666
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 196/414 (47%), Gaps = 14/414 (3%)
Query: 25 KTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDY 84
+ PS+ F S++ P+ + +E KS + V K + + D LA E F
Sbjct: 14 RKPSIPFVLSTNP--VPNLKAENEE------KSSVLKEADVLKRLKHEHDITLALEYFKS 65
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+ +F+H+ TY ++I KL + + +L +K E + LF +I Y +
Sbjct: 66 IANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAG 125
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++ALKTF M +F KP K N IL+ L+ N + ++ + K G+ PN +Y
Sbjct: 126 SSEQALKTFYRMQDFRVKPTVKIYNHILDALLD-ENRFQMINPIYSNMKKDGMEPNVFTY 184
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI+++A C N + A+ L +M +G PD SY L+ LC+ +V A +L
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELA----- 239
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
F P Y L+N +C++ EA++LL M KG +P+++ Y T++ G
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+ VL M + GC PNL ++ +L+ G +G A + MI +G P+ +AL+
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G C+ + +A V ++ G P+ T+ ++ +++ EV N ++
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 36/365 (9%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F +I+ I +K + + P++FTY L+K ++N D A K M C P
Sbjct: 162 FQMINPIYSNMKKD--GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSY 219
Query: 169 NRILELL-----------------------------VTHRNYLRPAFDLFKSAHKHGVLP 199
++ L V AF L G+ P
Sbjct: 220 TTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDP 279
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY ++ A G++ ++ + KMF RG P++ ++ L++G K + A+D
Sbjct: 280 NVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M+ +G VP+ ++Y L++ LC K+ L +A + +M++ GC P++ Y+ ++ G+ +
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G A +V M ++GC PN+V+Y +V LC MF+ A ++ M + P+
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ IKG C G+VD A V +++ +G P+ T+ ++ + + GE +
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD---RRFGEAFGLVKD 516
Query: 440 VEIKG 444
+E +G
Sbjct: 517 MEHRG 521
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 149/314 (47%), Gaps = 9/314 (2%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F L+D+++ + + P++ +Y +I +++ + +L M C P
Sbjct: 266 FQLLDEMM------NKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
+++ + A D + + GV+PN +YN +M C + A ++FN+M
Sbjct: 320 TSLIKGFFL-KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G P+V +Y L+ G + ++ A ++ M+ G P+ ++YT +++ LCR
Sbjct: 379 INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+AY L+ M+V+ C P+ V +NT + G C GR A KV + M ++GC PN +Y L+
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
L F A ++ M +G + + +I G+C G + EA +L +++ G
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558
Query: 409 PHEDTWVMIVPQIC 422
P T +++ C
Sbjct: 559 PDAITVNIVIDAYC 572
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +++ HG PN +Y M+ C N + AY L M P+ ++
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++GLC +V+ A+ + + M N G P+T +Y LL+SL + ++ EA+ L+ M+ +G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
++V YNT++ G+C G +A ++L M G P+ ++ ++ C QG ++A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M + + + P +LI G C V+EA L +L G +P+ TW ++V +
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 147/282 (52%), Gaps = 4/282 (1%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
SL D + + + E P++ TY LI YA++ D A + + M+ C P
Sbjct: 366 SLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYT 425
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
++++L + + A+ L ++ PNT ++N ++ C +G + A +F++M
Sbjct: 426 CMVDVLCRNSMF-NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G P+ +Y L+ L + + A L++DM ++G + ++Y T++ C L E
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A +LL +M V+G PD + N V+ +C++G+ A ++++ + + P++++Y +L+
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG-FCNVG 390
G+C + A Y++ M+S+G SP+ + + L++ F N+G
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG 646
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
Y ++ L R F+ ++ ++ E+ P F IK S D A+K F M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N +L+ L+ R + AF L K G+ N +YN ++ +C G
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRF-GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L KM RG PD + I++ C++ +VN A+ L++ + + PD ++YT+
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
L++ +C + EA L RM +G +P++ +N +V
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 189/383 (49%), Gaps = 7/383 (1%)
Query: 56 KSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLID 115
K+PI V +L +++D +LA F + F+H+ TY I+I KLGR +
Sbjct: 41 KTPIKESDVVMRL-RTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQ 99
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L +K E + LF +I Y L ++ALK F + EF C+P K N +L+ +
Sbjct: 100 YLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAM 159
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ N + ++ + + G PN +YNI+++A C N + A L +M +G PD
Sbjct: 160 LSE-NRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPD 218
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V SY ++ + + +V A +L + F P+ Y L+N CR+ K++E + LL
Sbjct: 219 VVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLG 273
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+M KG +P+++ Y+TV+ G A V M GC PN+ ++ +L+ G +G
Sbjct: 274 QMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRG 333
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A M +GF P+ + LI G C+ GK+ EA V ++ + G +P+ T+
Sbjct: 334 RVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYG 393
Query: 416 MIVPQICAGEEMEKLGEVLNEIV 438
++ ++ E+ N+++
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMM 416
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 149/309 (48%), Gaps = 6/309 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+K Y AL + M E +P N ++ L +H + A +
Sbjct: 322 FTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGK-MGEAVSVSSKM 380
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++G PN +Y ++ F GD+ A ++NKM G +P+V Y ++ LCR S
Sbjct: 381 ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMF 440
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A L+E M P+T+++ T + LC ++ A L C+M+ GC+P+I YN V
Sbjct: 441 SQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEV 500
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G +E R +A +++ +M G NLV+Y T+ GG C+ G F+ A K + M+ G
Sbjct: 501 LDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGV 560
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE-----APHEDTWVMIVPQICAGEEM 427
P + L +C GKV A +L++L G+ A + I QI E +
Sbjct: 561 KPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV 620
Query: 428 EKLGEVLNE 436
L ++LNE
Sbjct: 621 LYLDKMLNE 629
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 144/267 (53%), Gaps = 4/267 (1%)
Query: 179 RNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R Y ++ F L + G+ PN +Y+ ++ + G++ +A ++ KMF RG P+V
Sbjct: 261 REYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVY 320
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ LM+G + +V A+++ M +GF P+ ++Y TL++ LC K+ EA + +M
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM 380
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ GC+P++ Y ++ GF + G + A ++ M +NGC+PN+V Y ++V LC MF
Sbjct: 381 ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMF 440
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M + P+ + IKG C G+V+ A + ++ + G +P+ T+ +
Sbjct: 441 SQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEV 500
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKG 444
+ + + ++ E L + ++E KG
Sbjct: 501 LDGLL---KENRIKEALELVTEMEEKG 524
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 148/312 (47%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY I + S + + AL + M C P +++ R + A
Sbjct: 280 IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFM-RGRVLEA 338
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++ + G PN +YN ++ C +G + A ++ +KM G P+V +Y L+ G
Sbjct: 339 LNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDG 398
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + A ++ M+ G +P+ + YT+++N LCR +A+ L+ +M C P+
Sbjct: 399 FAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPN 458
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V +NT + G C GR A + M GC PN+ +Y ++ GL + A + +
Sbjct: 459 TVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVT 518
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M KG + + + GFCNVGK +EA +L ++L G P T+ + C
Sbjct: 519 EMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQG 578
Query: 426 EMEKLGEVLNEI 437
+++ ++L+++
Sbjct: 579 KVKTAIQLLDKL 590
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 156/304 (51%), Gaps = 4/304 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G + + + + ++ K E +P++ TY LI +A++ A + + M+ C P
Sbjct: 363 GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ +L + A+ L + PNT ++N ++ C +G + A L
Sbjct: 423 NVVVYTSMVNVL-CRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINL 481
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F +M + G P++++Y ++ GL +++++ A++L+ +M KG + ++Y T+ C
Sbjct: 482 FCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCN 541
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLV 342
K EA KLL +M V G PD + YNT+ +C +G+ A ++L+ + + G +P +
Sbjct: 542 VGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVA 601
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y +L+ G+C+Q + A Y+ M+++G + + +AL++G N +L+++
Sbjct: 602 AYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDI 661
Query: 403 LKAG 406
L +G
Sbjct: 662 LTSG 665
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 190/415 (45%), Gaps = 39/415 (9%)
Query: 44 PEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILIL 103
P E S++ + I + Q L + A F +A P F+HS ++ IL+
Sbjct: 60 PHHDLELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFFLWAKSIPGFQHSVMSFHILVE 119
Query: 104 KLGRAKYFSLIDDILITLK-SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
LG K F+++ D LI ++ S HY + +F + + Y+++NLPD A+++F M EF K
Sbjct: 120 ILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIK 179
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P +++L +L + +++ A F A K+ L K+Y+I++ + GD A+
Sbjct: 180 PTINDFDKLLFILCKTK-HVKQAQQFFDQA-KNRFLLTAKTYSILISGWGDIGDSEKAHE 237
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS-- 280
LF M E+G D+ +Y L+Q LC+ V+ A + DML+K PD +Y+ ++S
Sbjct: 238 LFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYC 297
Query: 281 ---------------------------------LCRKKKLREAYKLLCRMKVKGCNPDIV 307
LC+ + + EAY LL M +G PD
Sbjct: 298 DADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTW 357
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN + C A +++ M + CLP+ +Y ++ L G FD K M
Sbjct: 358 SYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNM 417
Query: 368 ISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K F P S +I GFC GK++EAC E ++ G P+ T M+ Q+
Sbjct: 418 GDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQL 472
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 2/270 (0%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ +T ++ LI + + ++A + F++MLE C N +L+ L + A
Sbjct: 212 FLLTAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCK-GGCVDEA 270
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F V P+ +Y+I + ++C D+ A + +KM ++P+V +Y +++
Sbjct: 271 KTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKR 330
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V A LL++M+++G PDT SY + C ++ A +L+ RM+ C PD
Sbjct: 331 LCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPD 390
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ-GMFDVAKKYM 364
YN V+ R GR KV +M P++ +Y ++ G C + G + A KY
Sbjct: 391 RHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYF 450
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
++MI +G P+ + L +G +D
Sbjct: 451 EMMIDEGIPPYVTTVEMLRNQLLGLGFLDH 480
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
E + ++ + + + + A+ M G P + LL LC+ K +++A + +
Sbjct: 148 EIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQ 207
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
K + Y+ ++ G+ G + A ++ + M GC +L++Y L+ LC G
Sbjct: 208 AKNRFLLTAKT-YSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGC 266
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D AK M+SK P I +C+ V A VL+++ + P+ T+
Sbjct: 267 VDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNC 326
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
I+ ++C E +E+ +L+E++ ++ DT
Sbjct: 327 IIKRLCKNEHVEEAYLLLDEMISRGVRPDT 356
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 174/380 (45%), Gaps = 39/380 (10%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-K 122
V +LI Q A E F +AS PNF HS STY LI KL + F + +L +
Sbjct: 38 HVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPH 97
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH---- 178
S P +F +I+ + + +K + +F+ P K N IL++LV
Sbjct: 98 SLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDM 157
Query: 179 ------------------------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
N + F L + GV PNT YN ++
Sbjct: 158 AREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLL 217
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A C NG + A L N+M + P+ ++ IL+ G C++ +A+ LLE + GFV
Sbjct: 218 HALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFV 273
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +S T +L LC + EA ++L R++ G D+V YNT++ GFC G+
Sbjct: 274 PDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHF 333
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ M + GCLPN+ +Y L+ G + GM D+A M + G +F LI+G C+
Sbjct: 334 LKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCS 393
Query: 389 VGKVDEACGVLEELLKAGEA 408
++++ +LE + ++ E
Sbjct: 394 EERIEDGFSILELMEESKEG 413
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 165/380 (43%), Gaps = 46/380 (12%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ L +E F LI Y + +AL P
Sbjct: 225 KVGRAR----------NLMNEMEDPNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVP 274
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ ++LE+L + A ++ + G L + +YN +++ FC G + +
Sbjct: 275 DVVSVTKVLEILCNAGRTMEAA-EVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHF 333
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
+M +G +P+V++Y +L+ G ++ A+DL DM G + +++ TL+ LC
Sbjct: 334 LKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCS 393
Query: 284 KKKLREAYKLLCRMKV--KGCNPDIVHYNTVVLGF------------------------- 316
++++ + + +L M+ +G I YN+++ G
Sbjct: 394 EERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVD 453
Query: 317 --------CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
C++G DA +V + M G +P+++ Y LV G QG A + M MI
Sbjct: 454 RSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMI 513
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ P S +A+I GFC GKV+ A ++E++ G P+ +T+ ++ +C +++
Sbjct: 514 ANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQ 573
Query: 429 KLGEVLNEIVKVEIKGDTRI 448
K +V ++V I D I
Sbjct: 574 KAMQVFMQMVDKGILPDLFI 593
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 36/286 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LIK + + L + M C P N ++ + L A DLF
Sbjct: 314 YNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGF-SESGMLDLALDLFNDM 372
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE--RGVMPDVESYRILMQGL---- 246
G+ N +++ ++R C I +++ M E G + Y ++ GL
Sbjct: 373 KTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKN 432
Query: 247 -----------------------------CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
C+K + A + + M+++G +P L Y L
Sbjct: 433 GFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCL 492
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ ++ +REA +L+ M C P +N V+ GFCR+G+ A K++ED+ + GC
Sbjct: 493 VHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGC 552
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+PN +Y L+ LC G A + M+ KG P + ++L+
Sbjct: 553 VPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLL 598
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 164 LPKQLNRILELLVTH--RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P+ ++R L +++ H + + A ++ G +P+ YN ++ F G++ A
Sbjct: 448 FPRAVDRSL-MILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAV 506
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L N+M P ++ ++ G CR+ +V A+ L+ED+ +G VP+T +Y+ L++ L
Sbjct: 507 ELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVL 566
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
CR L++A ++ +M KG PD+ +N+++L +E
Sbjct: 567 CRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQE 604
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P ++M+ C G I A ++++M + G +P + Y L+ G ++ V AV
Sbjct: 447 LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAV 506
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L+ +M+ P ++ ++ CR+ K+ A KL+ + +GC P+ Y+ ++
Sbjct: 507 ELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVL 566
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
CR G A +V M G LP+L + +L+ L + F
Sbjct: 567 CRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQERHF 607
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +L + P ++N ++ FC G + A L + RG +P+ E+Y
Sbjct: 502 VREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSP 561
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
L+ LCR + +A+ + M++KG +PD + +LL SL +++
Sbjct: 562 LIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQER 605
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PS+ Y L+ +++ A++ M+ NC P+P N ++ + + A
Sbjct: 484 PSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGF-CRQGKVESALK 542
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G +PNT++Y+ ++ C NGD+ A +F +M ++G++PD+ + L+ L
Sbjct: 543 LVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLS 602
Query: 248 RKSQVNRAVDLLEDMLNKGFV 268
++ ++ +MLN ++
Sbjct: 603 QERHFSK------NMLNIDYI 617
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 151/300 (50%), Gaps = 5/300 (1%)
Query: 130 PSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY I I A ES + +A+K M + CKP N ++ + L A
Sbjct: 245 PDVITYTILIEATCKESGV-GQAMKLLDEMRDKGCKPDVVTYNVLING-ICKEGRLDEAI 302
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+G PN ++NI++R+ C G A +M +G P V ++ IL+ L
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CRK + RA+D+LE M G P++LSY LL++LC+ KK+ A + L M +GC PDI
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ C++G+ A ++L + S GC P L++Y T++ GL G D A K +
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE 482
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG P L+ G GKVDEA +L + G P+ T+ I+ +C +
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 160/310 (51%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D A++ M + C+P N IL + + ++ A
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWM-DAEK 338
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G P+ ++NI++ C G I A + KM + G P+ SY L+ LC
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALC 398
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ RA++ L+ M+++G PD ++Y TLL +LC+ K+ A ++L ++ KGC+P ++
Sbjct: 399 KDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLI 458
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ DA K+L++M G P++++Y TLVGGL +G D A + +
Sbjct: 459 TYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ ++++ G C + A L ++ G P E ++++++ +
Sbjct: 519 EEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLA 578
Query: 428 EKLGEVLNEI 437
++ E+LNE+
Sbjct: 579 KEALELLNEL 588
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E P + TY LI Y ++ AL+ M + P N IL L
Sbjct: 172 EDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCD-SGK 227
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A ++ + P+ +Y I++ A C + A L ++M ++G PDV +Y +
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G+C++ +++ A+ L M + G P+ +++ +L S+C + +A K L M KG
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+P +V +N ++ CR+G A VLE MP +GC PN +SY L+ LC + A
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y+ +M+S+G P + L+ C GKVD A +L +L G +P T+ ++ +
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
+ + ++L+E+ +K D
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPD 491
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 32/289 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F + G +P+ + ++R C G A + + + G +PDV +Y +
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNV 185
Query: 242 LMQGLCRKSQVNRAVDLLEDM--------------------------------LNKGFVP 269
L+ G C+ ++ A+ LL+ M + + P
Sbjct: 186 LISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYP 245
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++YT L+ + C++ + +A KLL M+ KGC PD+V YN ++ G C+EGR +A + L
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
MPS GC PN++++ ++ +C G + A+K++ MI KG SP + LI C
Sbjct: 306 NHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRK 365
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G + A VLE++ + G P+ ++ ++ +C ++ME+ E L+ +V
Sbjct: 366 GLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 3/283 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y P++ T+ +++ + A K M+ C P N ++ L + +
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLC-RKGLIG 369
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D+ + +HG PN+ SYN ++ A C + + A + M RG PD+ +Y L+
Sbjct: 370 RAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLL 429
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV++L + +KG P ++Y T+++ L + K +A KLL MK KG
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDI+ Y+T+V G REG+ +A D+ G PN ++Y +++ GLC A +
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDF 549
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M+++G P + LI+G G EA +L EL G
Sbjct: 550 LAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 3/258 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M + C P N +L L + R A
Sbjct: 349 SPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER-AI 407
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G P+ +YN ++ A C +G + +A + N++ +G P + +Y ++ GL
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + + A+ LL++M KG PD ++Y+TL+ L R+ K+ EA ++ G P+
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN+++LG C+ + + A L M + GC P SY L+ GL +G+ A + +
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587
Query: 367 MISKGFSPHFSVSHALIK 384
+ S+G S ++K
Sbjct: 588 LCSRGVVKKSSAEQVVVK 605
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 3/235 (1%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N +R NG++ + M RG +PD+ + L++GLC+ + +A ++E + +
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G VPD ++Y L++ C+ ++ A +LL RM V +PD+V YNT++ C G+ +
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKE 230
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +VL+ C P++++Y L+ C + A K + M KG P + LI
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G C G++DEA L + G P+ T +I+ +C+ + L E+++
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R G + K LEDM G +P++++ +L+ GLC G A + M+++ G P
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ LI G+C G++ A L+ L + +P T+ I+ +C ++++ EVL+
Sbjct: 182 TYNVLISGYCKTGEIGSA---LQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 438 VKVEIKGD----TRIVEA-----GIGLEDYLIGKTRSR 466
++ E D T ++EA G+G L+ + R +
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK 276
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 214/457 (46%), Gaps = 87/457 (19%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYAS--RQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+P + LI+ Q DP + +IF +A +P F H+ TY + LKL + + FS I+ +L
Sbjct: 48 NPKLLSSLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLL 107
Query: 119 ITLKSE--HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
L+S H + T +I+ Y + P RALKTF + F +P + +N +L LV
Sbjct: 108 AGLRSSPPHCCGEEPIVT-VIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLV 166
Query: 177 THRNYLRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFC----------------------- 212
++ Y R AF +FK+ + VLPN S NI+++A C
Sbjct: 167 QNKRY-RLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPN 225
Query: 213 ------------FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+ GD+ A +F ++ +RG PDV SY +L+ G CR ++ A+ +++
Sbjct: 226 VVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMD 285
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-------------------- 300
M + G P+ ++Y ++ + C++KK EA L+ M K
Sbjct: 286 IMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEG 345
Query: 301 -----------------GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
G N +V +T++ C++G+ ++A V ++ G + +L++
Sbjct: 346 NVEKACEMWRMVSRKNCGLNGAVV-VSTLIHWLCKKGKVLEARNVFDEF-GKGSVASLLT 403
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ GLC+ G A + M+ KG +P+ + LIKGFC VG E VLEE+L
Sbjct: 404 YNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEML 463
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+ P++ T+ +++ I LG + EI KV
Sbjct: 464 ENRCLPNKSTYTILIDGILL------LGGMKQEINKV 494
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 31/293 (10%)
Query: 162 KPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLP---NTKSYNIMMRAF----CF 213
KP P +LN ++L L++ ++ + +F A H P N ++Y + CF
Sbjct: 41 KPWPHRLNPKLLSSLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCF 100
Query: 214 NGDISIAYTLFNKMFERGVMPDV---ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+ S+ L R P E +++G + RA+ + + G P
Sbjct: 101 SEIESLLAGL------RSSPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLRIESFGIRPS 154
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN------PDIVHYNTVVLGFCREGRAID 324
S LLNSL + K+ R A+ + K C P++V N ++ C+
Sbjct: 155 VRSINALLNSLVQNKRYRLAF-----LVFKNCGERFRVLPNVVSCNILLKALCKGNEVEV 209
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A KVL++MP G +PN+VSY T++GG +G D A K + ++ +G+SP + L+
Sbjct: 210 AVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVD 269
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
GFC +GK+ +A V++ + G P+E T+ +++ C + +K GE +N I
Sbjct: 270 GFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYC---KEKKSGEAVNLI 319
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 39/262 (14%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+K FR +L+ P +++ L A + +GV PN +Y +
Sbjct: 243 DGAMKVFREVLDRGWSPDVTSYTVLVDGF-CRLGKLVDAIRVMDIMEDNGVEPNEVTYGV 301
Query: 207 MMRAFCFNGDISIAYTLFNKMF--------------------ERGVMPDVESYRI----- 241
M++A+C A L M E V E +R+
Sbjct: 302 MIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKN 361
Query: 242 -----------LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
L+ LC+K +V A ++ D KG V L+Y TL+ LC +L EA
Sbjct: 362 CGLNGAVVVSTLIHWLCKKGKVLEARNVF-DEFGKGSVASLLTYNTLIAGLCEGGELCEA 420
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M KG P+ YN ++ GFC+ G A + +VLE+M N CLPN +Y L+ G
Sbjct: 421 ARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDG 480
Query: 351 -LCDQGMFDVAKKYMQLMISKG 371
L GM K + L +S G
Sbjct: 481 ILLLGGMKQEINKVVSLAMSTG 502
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 3/312 (0%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I I A N +A+K M + CKP N ++ + L A
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING-ICKEGRLDEAIK 299
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ +G PN ++NI++R+ C G A L + M +G P V ++ IL+ LC
Sbjct: 300 FLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLC 359
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
RK + RA+D+LE M G VP++LSY LL+ C++KK+ A + L M +GC PDIV
Sbjct: 360 RKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIV 419
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ C++G+ A ++L + S GC P L++Y T++ GL G + A + ++ M
Sbjct: 420 TYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEM 479
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
KG P L++G GKVDEA + ++ P T+ I+ +C ++
Sbjct: 480 RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 539
Query: 428 EKLGEVLNEIVK 439
+ + L +V+
Sbjct: 540 SRAIDFLAYMVE 551
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G+ K + I +IL E+ P + TY LI Y +S D+AL+ M + P
Sbjct: 155 GKTKKATRIMEIL-----ENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAP 206
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N IL L L+ A ++ + P+ +Y I++ A C + + A L
Sbjct: 207 DVVTYNTILRSLCDS-GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKL 265
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++M ++G PDV +Y +L+ G+C++ +++ A+ L +M + G P+ +++ +L S+C
Sbjct: 266 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE---GRAIDACKVLEDMPSNGCLPN 340
+ +A +LL M KGC+P +V +N ++ CR+ GRAID VLE MP +GC+PN
Sbjct: 326 TGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID---VLEKMPKHGCVPN 382
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+SY L+ G C + D A +Y+++M+S+G P + L+ C GKVD A +L
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L G +P T+ ++ + + E E+L E+ + +K D
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPD 487
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 149/303 (49%), Gaps = 5/303 (1%)
Query: 114 IDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
ID L L E V P + TY +++ +S A++ L+ C P +
Sbjct: 192 IDKALEVL--ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTIL 249
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+E + + + A L K G P+ +YN+++ C G + A N M G
Sbjct: 250 IEA-TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 308
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
P+V ++ I+++ +C + A LL DML KG P +++ L+N LCRK+ L A
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L +M GC P+ + YN ++ GFC+E + A + LE M S GC P++V+Y TL+ L
Sbjct: 369 DVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G D A + + + SKG SP + +I G VGK + A +LEE+ + G P
Sbjct: 429 CKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDI 488
Query: 412 DTW 414
T+
Sbjct: 489 ITY 491
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 152/294 (51%), Gaps = 3/294 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D A+K +M + CKP N IL + + ++ A
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWM-DAER 334
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ ++NI++ C + A + KM + G +P+ SY L+ G C
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFC 394
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++RA++ LE M+++G PD ++Y TLL +LC+ K+ A ++L ++ KGC+P ++
Sbjct: 395 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI 454
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ A ++LE+M G P++++Y TL+ GL +G D A K M
Sbjct: 455 TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
P +A++ G C + A L +++ G P E T+ +++ I
Sbjct: 515 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 136/245 (55%), Gaps = 3/245 (1%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G +P+ + ++R FC +G A + + G +PDV +Y +L+ G C+ ++++
Sbjct: 135 QGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK 194
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+++LE M PD ++Y T+L SLC KL+EA ++L R + C PD++ Y ++
Sbjct: 195 ALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIE 251
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C + A K+L++M GC P++V+Y L+ G+C +G D A K++ M S G P
Sbjct: 252 ATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKP 311
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ + +++ C+ G+ +A +L ++L+ G +P T+ +++ +C + + +VL
Sbjct: 312 NVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 371
Query: 435 NEIVK 439
++ K
Sbjct: 372 EKMPK 376
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y P++ T+ +++ + A + ML C P N ++ L R L
Sbjct: 307 YGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKR-LLG 365
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D+ + KHG +PN+ SYN ++ FC + A M RG PD+ +Y L+
Sbjct: 366 RAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL 425
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV++L + +KG P ++Y T+++ L + K A +LL M+ KG
Sbjct: 426 TALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLK 485
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDI+ Y+T++ G REG+ +A K+ DM P+ V+Y ++ GLC A +
Sbjct: 486 PDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545
Query: 364 MQLMISKGFSPHFSVSHALIKGFCN 388
+ M+ KG P + LI+G +
Sbjct: 546 LAYMVEKGCKPTEATYTILIEGIAD 570
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M + C P N +L + R A
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR-AI 403
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G P+ +YN ++ A C +G + A + N++ +G P + +Y ++ GL
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + AV+LLE+M KG PD ++Y+TLL L R+ K+ EA K+ M+ P
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN ++LG C+ + A L M GC P +Y L+ G+ D+G+ + A + +
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNE 583
Query: 367 MISKGFSPHFSVSHALIK 384
+ S+GF S ++K
Sbjct: 584 LCSRGFVKKSSAEQVVVK 601
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 3/197 (1%)
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I ++ L R ++ + LE M+ +G +PD ++ T+L+ CR K ++A +++ ++
Sbjct: 111 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENS 170
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD++ YN ++ G+C+ G A +VLE M P++V+Y T++ LCD G A
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEA 227
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ + + + P LI+ CN V +A +L+E+ K G P T+ +++
Sbjct: 228 MEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 287
Query: 421 ICAGEEMEKLGEVLNEI 437
IC +++ + LN +
Sbjct: 288 ICKEGRLDEAIKFLNNM 304
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L L R +L E K L RM +G PD++ +++ GFCR G+ A +++E + ++G
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P++++Y L+GG C G D A + ++ M +P + +++ C+ GK+ EA
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 229
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
VL+ L+ P T+ +++ C + + ++L+E+ K K D
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 277
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 162/307 (52%), Gaps = 3/307 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P +FTY LI Y + P K + M+++ C+P N +++ LV Y+ AF
Sbjct: 303 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI-DAF 361
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L + + P+ ++N+M+ FC G + +AY LF M +RG +PD+ +Y I++ G
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR ++++ A LLE M G PD ++Y ++++ LC+ ++ EAY++ ++ G D+
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V +T++ G C+ R DA K+L +M NG P++V+Y L+ G C D + +
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ KG P +I C +V + C +L+ +L+ G P + ++ +C +
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 427 MEKLGEV 433
++ E+
Sbjct: 602 YDEAYEL 608
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 175/407 (42%), Gaps = 72/407 (17%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V +++ D A + FD+ + QP ++HS T L+ R K
Sbjct: 99 PSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKK----------- 147
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E Y + K R L C P + ++ R++
Sbjct: 148 AQEAYDL---------------------FKNHRCGL---CSPDSITYSTLINGFCKARDF 183
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A+ L K G++P+ YN +++ C NG + A + M +R P V +Y I
Sbjct: 184 -QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTI 241
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC+ ++++ A +LEDM+ G P+ ++Y TL+N C+ + EA L +M
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL---------- 351
C+PD+ YN ++ G+C++ R D K+L++M GC PN ++Y TL+ L
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 352 -------------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
C G D+A + QLM +G P + +I G
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
C ++D+A +LE + +AG P T+ IV +C ++++ EV
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 121/225 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + ++G P+ +Y I++ FC + + F++M ++G +P V +Y I
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ LC+ ++V LL+ ML +G PD + YT++++ LC+ EAY+L MK G
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P +V YN +V C+ R +A +LE M S+GCLP+ V+Y ++ G D A
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ Q M S+G SP + L+ K+D+A + EE L+AG
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 156/321 (48%), Gaps = 3/321 (0%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY I I +N D A + M E C P N I+ L + + A++
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC-KASQVDEAYE 467
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+++ G + + + ++ C + + A L +M G PDV +Y IL+ G C
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ Q+++++ +ML+KG VP ++Y+ +++ LC+ ++R+ LL M +G PD +
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +V+ G C+ +A ++ + M GC P +V+Y LV LC D A +++M
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
S G P +++ GF + D+A + + + G +P + +++ ++ A E+M
Sbjct: 648 ESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKM 707
Query: 428 EKLGEVLNEIVKVEIKGDTRI 448
++ E+ E ++ D I
Sbjct: 708 DQAMEIWEEALEAGADVDPEI 728
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ L + F G +P +Y+I++ C + + L M ERGV PD Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ GLC+ + A +L + M G P ++Y L++ LC+ +L EA LL M+
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC PD V YN+V GF + A ++ + M S GC P Y L+ L + D
Sbjct: 650 DGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQ 709
Query: 360 AKKYMQLMISKGFSPHFSVSHAL 382
A + + + G +S L
Sbjct: 710 AMEIWEEALEAGADVDPEISRTL 732
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 52/272 (19%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCR------KSQVNRAVDLLEDMLNK------- 265
I Y K F R V+ E + + + LC S V R + L+D+
Sbjct: 64 IFYAQAAKEFLR-VLDSSEDFELASRRLCEFGGYLVPSVVGRVLQQLDDLDKAVKFFDWC 122
Query: 266 ----GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
G+ + LL++ RKKK +EAY L + C+PD + Y+T++ GFC+
Sbjct: 123 TGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARD 182
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY------------------ 363
A ++L++M G +P+ Y T++ GLCD G D A +
Sbjct: 183 FQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTIL 242
Query: 364 ----------------MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
++ MI G +P+ + LI GFC +G +DEA + ++L+
Sbjct: 243 VDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 302
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+P T+ +++ C E + ++L E+VK
Sbjct: 303 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVK 334
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 174/328 (53%), Gaps = 3/328 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+S+H P L T L Y S P + F M +P N +L LV +
Sbjct: 130 LRSDHTIPKPLLDTSLAA-YVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNS 188
Query: 181 YLRPAF--DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
F ++F+ A K GV PN ++NI++ +C + + A L N+M E G PD +
Sbjct: 189 SHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVT 248
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ LC++SQ+ + DLL M N G P+ +Y L++ C+ K L+EA +++ M
Sbjct: 249 YNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT 308
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG PD+ YNT+V G C EG+ +A ++ + M S +P++V+Y TL+ G + D
Sbjct: 309 GKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSD 368
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ M ++G + + +IK FC GK+DEA V+ +++++G +P T+ ++
Sbjct: 369 AAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMI 428
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C +M + ++++E+ + +K DT
Sbjct: 429 NGYCKAGKMAEAYKMMDEMGRKGLKLDT 456
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 169/336 (50%), Gaps = 5/336 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+TY IL+ + K+ +++ + + + P ++TY +++ + D A++
Sbjct: 282 NTYNILVHGYCKLKWLKEAAEVIELMTGK--GMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M F P N +++ HR AF L + GV N ++NIM++ FC
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGS-DAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G I A + KM E G PD +Y ++ G C+ ++ A ++++M KG DT +
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
TLL+++C +K+L +AY L + + +G D V Y T+++G+ ++ +A A K+ E+M
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G + +++Y T++ GLC G D A + ++ KG P S S+ +I G+C G V+
Sbjct: 519 ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVE 578
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+A ++++ P T +++ +C +EK
Sbjct: 579 KAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 181/411 (44%), Gaps = 13/411 (3%)
Query: 40 SPSSPEQQQESSISNSKSPIGSPCRVQKLIAS--QSDPLLAKEIFDYASR---QPNFRHS 94
S P + + S I P L A P L +IF+ R +PN
Sbjct: 117 SSDHPHHSLHAHLLRSDHTIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTC 176
Query: 95 NSTYLILILKLGRAKY-FSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALK 151
N+ L+ L R+ SL+ + + V P++ F LI Y N + AL+
Sbjct: 177 NT----LLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALR 232
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
M E+ C P N +L L R+ L DL G+ PN +YNI++ +
Sbjct: 233 LINQMGEYGCCPDNVTYNTVLTALCK-RSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGY 291
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A + M +G++PDV +Y +++GLC + +++ AV L + M + VPD
Sbjct: 292 CKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDV 351
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y TL++ + A+KL+ MK +G + V +N ++ FC EG+ +A V+
Sbjct: 352 VTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVK 411
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M +G P+ +Y T++ G C G A K M M KG + L+ C +
Sbjct: 412 MVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ 471
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+D+A + + K G E T+ ++ E+ ++ ++ E+ + I
Sbjct: 472 LDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGI 522
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 5/254 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A+ + + G+ +T + N ++ C + AYTL K +RG + D +Y
Sbjct: 437 MAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGT 496
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G + Q +RA+ L E+M G V ++Y T++ LC K +A L + KG
Sbjct: 497 LIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD N ++ G+C EG A + M + P++ + L+ GLC +GM +
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616
Query: 362 KYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
ISKG P +V++ +I FC ++++A ++ E+ P T+ IV
Sbjct: 617 TLFNTWISKG-KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675
Query: 421 IC-AG--EEMEKLG 431
+ AG EE EKL
Sbjct: 676 LTKAGRTEEAEKLA 689
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L++ + G++ +YN ++R C +G A N++ E+G++PD + I++
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + V +A M+ PD + LL LCR+ L + L KG
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM 629
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V YN ++ FC+E R DA ++ +M P+ +Y +V GL G + A+K
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLA 689
Query: 365 QLMISKG-------FSPHFSVSHAL----IKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
KG SP S + I C GK +A + ++ + G + ++ T
Sbjct: 690 LKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYT 749
Query: 414 WVMIV 418
++ ++
Sbjct: 750 YIKLM 754
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 3/269 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P FTY +I Y ++ A K M K LN +L + + L A+
Sbjct: 418 SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ-LDDAY 476
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L A K G + + +Y ++ + + A L+ +M E G++ + +Y +++GL
Sbjct: 477 TLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGL 536
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C + ++AVD L ++L KG VPD + +++ C + + +A++ +M PDI
Sbjct: 537 CLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDI 596
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N ++ G CREG + S G + V+Y ++ C + + A M
Sbjct: 597 FTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTE 656
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M K P +A++ G G+ +EA
Sbjct: 657 MEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+I Y ++A + M+E + KP N +L L L LF +
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLC-REGMLEKGLTLFNTWISK 625
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G +T +YNI++ +FC + A+ L +M + + PD +Y ++ GL + + A
Sbjct: 626 GKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685
Query: 256 VDLLEDMLNKGFVPDT-----------LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L KG T + Y+ ++SLC + K ++A KL + + KG +
Sbjct: 686 EKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSL 745
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+ Y ++ G + ++ +L M S
Sbjct: 746 NKYTYIKLMDGLLKRRKSFTTTSLLPFMVS 775
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 171/330 (51%), Gaps = 5/330 (1%)
Query: 113 LIDDILITLKSEHYPV-TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
LI D L L++++ P ++ LIK Y ++ + A + M E+ C + L
Sbjct: 192 LIAD-LRDLRNKYLPAPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTY 250
Query: 172 LELL--VTHRNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
LL + ++ AF+LF+ K ++P+ +YN+++ FC G + A T+F M
Sbjct: 251 STLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMR 310
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ P+ +Y L+ G C+K V A + E+M + G PD +SYT L+ LCR +
Sbjct: 311 KNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVD 370
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
E L+ M+ KGC D+V YN ++ G C++GR + +L +P G N+ SYR ++
Sbjct: 371 EGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVM 430
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC G + A + LM+ +GF PH++ S+ L+ G C+VG+V +A L L K G
Sbjct: 431 NTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDVGRVADATAALYGLAKFGFM 490
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P W ++ +C ++ + E+L+ ++
Sbjct: 491 PEASCWAKLIEAVCRDRKLRRSVELLDILI 520
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 155/388 (39%), Gaps = 77/388 (19%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
+ +LIAS A ++F+ A+ Q F H+ +T+ L+++L RA+ S +L S
Sbjct: 72 LARLIASSHTGQRALDLFNAAAEQRGFSHTAATFSALLIRLARARLPSATTAVLRRAASA 131
Query: 125 --HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR--N 180
+ L + S R L + + K L L+R LV+ R +
Sbjct: 132 PCRFLEPHLLPLLRLLPPDHSLTLLRLLPSLLRRRRVSHKALAVCLDR----LVSSRCPD 187
Query: 181 YLRPAF-DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L DL +K+ PNT YNI+++ + NGD A+ + ++M E DV
Sbjct: 188 VLADLIADLRDLRNKYLPAPNTCVYNILIKHYVKNGDSETAFRVLDEMREY-TCGDVR-- 244
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
P+ ++Y+TLL LCR K++EA++L M
Sbjct: 245 -----------------------------PNLVTYSTLLGGLCRAGKMKEAFELFEGMIE 275
Query: 300 KG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
K PD + YN ++ GFCR G+ A + M N C PN +Y TL
Sbjct: 276 KDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATL----------- 324
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
I G C G V+ A V EE+ AG P ++ ++
Sbjct: 325 ------------------------INGHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALI 360
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C +++ +++ E+ + K D
Sbjct: 361 GCLCRHGSVDEGIDLVMEMREKGCKADV 388
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC---LPNLVSYRTLVGGLCDQGMFDVA 360
P+ YN ++ + + G + A +VL++M C PNLV+Y TL+GGLC G A
Sbjct: 207 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 266
Query: 361 KKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+ + MI K P + +I GFC +G+V++A + + K P+ + ++
Sbjct: 267 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 326
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
C ++E V E+ ++ D A IG
Sbjct: 327 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIG 361
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 199/398 (50%), Gaps = 23/398 (5%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
SSP ++ S +S+ P P V L+ + ++ F + SR F+H S ++ +
Sbjct: 59 SSPTWERSSELSH-LIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSM 117
Query: 102 ILKLGRAKYFSLIDDILITL---------------------KSEHYPVTPSLFTYLIKIY 140
+ +L R + F D++ I + + + T F+ L+
Sbjct: 118 LNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQL 177
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ ++ + ML +P N ++++L ++ ++ A + +G P+
Sbjct: 178 GKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILC-NKGKVQEAELIMGHIFHYGACPD 236
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
T +Y ++ C NG++ +A+ +F++M + G P+ +Y L+ GLC + ++ A+D+LE
Sbjct: 237 TFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLE 296
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M++KG P +YT + SLC + EA KLL +MK +GC P++ Y ++ G R+G
Sbjct: 297 EMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDG 356
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ A V M ++G +P V+Y L+ L +G F+ A + M+S P+ +
Sbjct: 357 KFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYN 416
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+IKGFC++G + +A + +++LKAG +P+ T+ +I+
Sbjct: 417 VIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 160/319 (50%), Gaps = 7/319 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY +I IY + + A++ M++ N L L + L AF
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLE-MMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF +HG+ PN +YN ++ + + A LF KM E G +P +Y +++ G
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++++ A + M+ +G +P+ ++YT+ ++ LC+ + A+K+ MK + P++
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y++++ G C+EG+A DA ++L+D GC PN+ +Y TLV GLC +G A + ++
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG P + AL+ G C +V+ A + + ++ G P + ++ +C
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANF 738
Query: 427 MEKLGEVLNEIVKVEIKGD 445
+K + ++K D
Sbjct: 739 RQKAQCMFQTMLKKHWNSD 757
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 40/326 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + + A+ + ML P + ++ L + A +F+
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRF-ETALTIFEWM 403
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H LPNT++YN++++ FC G I A +F++M + G P+V +Y I++ ++ +
Sbjct: 404 LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A+ LLE M G DT +Y L++ R KL A+ L M G +P++V YN +
Sbjct: 464 NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523
Query: 313 VLGFCREGRAIDACKVLEDM------PSNGC----------------------------- 337
+ G+ + DA + M PS+G
Sbjct: 524 INGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGL 583
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
LPN+++Y + + GLC G +A K M + + P+ +LI G C G+ ++A
Sbjct: 584 LPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA-- 641
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICA 423
E LL G P+ DT+ +V +C
Sbjct: 642 --ERLLDDGCEPNVDTYTTLVRGLCG 665
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 164/361 (45%), Gaps = 12/361 (3%)
Query: 78 AKEIFDY---ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A IFD A PN TY I+I + Y + +L +K + +
Sbjct: 431 ATAIFDQMLKAGPSPNV----ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
LI ++ + A F M+E P N I+ +T + A LF +
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK-VDDALALFWKMVE 545
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G +P++ +YN+M+ F IS A KM ++G++P+V +Y + GLC+ + +
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL 605
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A + +M + + P+ +Y++L++ LC++ + +A +LL GC P++ Y T+V
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVR 661
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C +GR +A +++E M G P+ YR L+ G C + A K M++ GF P
Sbjct: 662 GLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
S ALI C +A + + +LK E W +++ + E + E+L
Sbjct: 722 CLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781
Query: 435 N 435
+
Sbjct: 782 H 782
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 146/331 (44%), Gaps = 38/331 (11%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
HY P FTY LI + ++ D A + F M++ C P + ++ L + L
Sbjct: 230 HYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCS-EGRL 288
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D+ + G+ P +Y I + + C G A L KM +RG P+V++Y L
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTAL 348
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL--------------------- 281
+ GL R + A+ + ML G VP ++Y+ L+N L
Sbjct: 349 ISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDS 408
Query: 282 --------------CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
C +++A + +M G +P+++ YN ++ + ++G +A +
Sbjct: 409 LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMR 468
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+LE M NG + +Y L+ G G + A M+ G SP+ +A+I G+
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
V KVD+A + +++++G P T+ M++
Sbjct: 529 TVAKVDDALALFWKMVESGNVPSSGTYNMMI 559
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 17/333 (5%)
Query: 103 LKLGRAKYFSLIDDILITLKSEH----------YPVTPSLFTY--LIKIYAESNLPDRAL 150
LKL Y +LI K EH + ++P++ TY +I Y D AL
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDAL 537
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M+E P N ++ + N + A + K G+LPN +Y +
Sbjct: 538 ALFWKMVESGNVPSSGTYNMMISGF-SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C NG S+A+ +F++M +R P++ +Y L+ GLC++ Q A LL+D G P+
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPN 652
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YTTL+ LC K + EA +L+ MK KG P Y +++G C+ A K+ +
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M + G P L Y+ L+ LC A+ Q M+ K ++ V L+ G G
Sbjct: 713 SMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEG 772
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ D + +L + + T VM+ ++ A
Sbjct: 773 ETDLSLELLHVMESRNCTLNFQTRVMLARELSA 805
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 13/356 (3%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPD 147
+F ++ ++ L+++LG+ L D+ I + + + P+LFT+ +IKI
Sbjct: 162 DFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNS--GIRPNLFTFNAMIKILCNKGKVQ 219
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A + + P L++ H L AF++F K G PN+ +Y+
Sbjct: 220 EAELIMGHIFHYGACP---DTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYS 276
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G + A + +M ++G+ P V +Y I + LC + AV LL M +
Sbjct: 277 ALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKR 336
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ +YT L++ L R K A + +M G P V Y+ ++ EGR A
Sbjct: 337 GCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETA 396
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ E M S+ LPN +Y ++ G C G A M+ G SP+ + +I
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHI 456
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVM--IVPQICAGEEMEKLGEVLNEIVK 439
+ G ++ A +LE + G DTW ++ G ++E + NE+V+
Sbjct: 457 YFKQGYMNNAMRLLE--MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVE 510
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 3/311 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI Y + D A +SM +P N I+ L ++ A++
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLC-REGSMKEAWE 305
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G P+ +YN ++ +C G+ A + +M GV P V +Y L+ +C
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC 365
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +NRA++ + M +G P+ +YTTL++ R+ L EAY++L M G +P +V
Sbjct: 366 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 425
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN + G C R +A V+++M G P++VSY T++ G C +G D A + Q M
Sbjct: 426 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ KG SP +LI+G C + ++ EAC + +E+L G P E T+ ++ C ++
Sbjct: 486 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 545
Query: 428 EKLGEVLNEIV 438
K + +E++
Sbjct: 546 NKALHLHDEMI 556
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 187/387 (48%), Gaps = 9/387 (2%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK-S 123
Q+L S SDP IF + ++ NS+ + L + + ++ID + T+ +
Sbjct: 112 AQELALSASDPS-GSSIFQ--CLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLA 168
Query: 124 EHYPVTPSLFTYLIKIYA----ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+ P + +Y + A ++ A + +R M+ P N ++ +
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCS-V 227
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L+ F ++G LPN +YN ++ A+C G I A+ L M +G+ P++ SY
Sbjct: 228 GELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISY 287
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+++ GLCR+ + A ++LE+M KGF PD ++Y TLLN C++ +A + M
Sbjct: 288 NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 347
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G +P +V Y ++ C+ A + + M G PN +Y TL+ G QG+ +
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M GFSP +A I G C + +++EA GV++E+++ G AP ++ I+
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 467
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDT 446
C E+++ ++ E+V+ + D
Sbjct: 468 GFCRKGELDRAFQMKQEMVEKGVSPDA 494
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 169/359 (47%), Gaps = 18/359 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + +A+ + + ++ +T LI ++ L + A + M
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 157 LEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
E P N + V R + A + + + G+ P+ SY+ ++ FC G
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLER--MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A+ + +M E+GV PD +Y L+QGLC ++ A DL ++ML+ G PD +YT
Sbjct: 474 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 533
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL+N+ C + L +A L M KG PD V Y+ ++ G ++ R +A ++L +
Sbjct: 534 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 593
Query: 336 GCLPNLVSYRTLV---------------GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+P+ V+Y TL+ G C +G+ A + + M+ + P +V +
Sbjct: 594 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 653
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I G C G + +A + +E++ +G PH T + ++ + E++ EV+ + ++
Sbjct: 654 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 712
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 3/292 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP TY L+ Y + +AL M+ P ++ + RN L A
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN-LNRAM 374
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ F G+ PN ++Y ++ F G ++ AY + N+M E G P V +Y + G
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ A+ ++++M+ KG PD +SY+T+++ CRK +L A+++ M KG +PD
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 494
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y++++ G C R +AC + ++M G P+ +Y TL+ C +G + A
Sbjct: 495 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 554
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
MI KGF P LI G + EA +L +L+ P + T+ ++
Sbjct: 555 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 166/379 (43%), Gaps = 21/379 (5%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E FD R R + TY LI R + IL + + +PS+ TY
Sbjct: 373 AMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF--SPSVVTYNA 429
Query: 138 KIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
I+ L + AL + M+E P + I+ + L AF + + +
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC-RKGELDRAFQMKQEMVEK 488
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV P+ +Y+ +++ C ++ A L +M + G+ PD +Y L+ C + +N+A
Sbjct: 489 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 548
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV-- 313
+ L ++M++KGF+PD ++Y+ L+N L ++ + REA +LL ++ + P V Y+T++
Sbjct: 549 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN 608
Query: 314 -------------LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GFC +G +A +V E M P Y ++ G C G A
Sbjct: 609 CSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 668
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ MI GF PH LIK G +E V+ + L++ + ++V
Sbjct: 669 FNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEI 728
Query: 421 ICAGEEMEKLGEVLNEIVK 439
ME + VL ++ K
Sbjct: 729 NHKEGNMEAVLNVLTDMAK 747
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
KS +++ FC G + A +F M ER P Y +++ G CR + +A +L ++
Sbjct: 615 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 674
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL------CRMKVKGCNPDIVHYNTVVLG 315
M++ GFVP T++ TL+ +L ++ E +++ CR+ +V N
Sbjct: 675 MIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINH---- 730
Query: 316 FCREGRAIDACKVLEDMPSNGCLPN 340
+EG VL DM +G LPN
Sbjct: 731 --KEGNMEAVLNVLTDMAKDGLLPN 753
>gi|38344321|emb|CAE02149.2| OSJNBa0058K23.3 [Oryza sativa Japonica Group]
gi|38345611|emb|CAD41894.2| OSJNBa0093O08.13 [Oryza sativa Japonica Group]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 169/315 (53%), Gaps = 2/315 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP + K+ A+ DP L F A + +++ + + Y ++I +L + FS ++++L
Sbjct: 37 SPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLAR 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++E + + F LIK+Y +N P++A++T +M +NC P K N +L +LV R
Sbjct: 97 ARAERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKR 156
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y +++ SA + GV +T +NI+++ C G A +L +M ++G +P+V +Y
Sbjct: 157 QY-EVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTY 215
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM LC+ QV++A +L E M + V D + Y L+ LCR++++ EA+ L M
Sbjct: 216 STLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVP 275
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KGC P+ Y ++ G G+ ++A ++ M + P S++ L+ GLC D
Sbjct: 276 KGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDD 335
Query: 360 AKKYMQLMISKGFSP 374
A ++ M+ +GF P
Sbjct: 336 AHLVLKQMVEQGFVP 350
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 10/211 (4%)
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVH 308
S RA D + + P+ Y+ +++ L ++ + +LL R + + D
Sbjct: 56 SSFKRACD------RRDYKPNEALYSMMIDRLASCRRFSDVEELLARARAERFRFSDEFF 109
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y + + A + L MP C P+ ++ ++ L + ++V +
Sbjct: 110 YRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSAS 169
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G + + L+KG C GK +A +L E+ K G P+ T+ ++ +C +++
Sbjct: 170 RLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVD 229
Query: 429 KLGEVLNEIVKVEIKGDT---RIVEAGIGLE 456
K E+ + K +I D I+ AG+ E
Sbjct: 230 KAFELCERMQKEDIVADAVVYNILIAGLCRE 260
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 168/324 (51%), Gaps = 2/324 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ + D L +F A + +++ S + Y ++I +L A+ FS ++++L
Sbjct: 37 APNEVLKVFVNIRDTSLINSVFKKACSRRDYKPSEALYSLMIDRLACARRFSDVEELLSK 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++E + F LIK+Y + P +A+ T +M +NC P K N +L +LV R
Sbjct: 97 ARTEKLRFSDEFFYRLIKMYGNVAEHPQKAMDTLFAMPGYNCWPSTKTFNYVLHMLVCKR 156
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y +++ SA + GV +T S+NI+++ C G A +L ++M ++G P+ +Y
Sbjct: 157 QY-EVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAISLLHEMPKQGCQPNATTY 215
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
M LC++SQV++A +L E M + DT+ Y L++ LCR +++ EA+ L M
Sbjct: 216 STFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNILISGLCRDERVTEAFDLFKSMTS 275
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+GC P+ Y ++ G G+ +A ++ M + G P+ SY+ L+ GLC
Sbjct: 276 EGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMSTEGVRPSFQSYKLLIDGLCSDDCVGD 335
Query: 360 AKKYMQLMISKGFSPHFSVSHALI 383
A ++ M+ +GF P L+
Sbjct: 336 AHLVLKQMVGQGFVPRMGTWTKLL 359
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P +++ ++ L K Q ++ G DT S+ L+ LC+ K EA L
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAISL 199
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M +GC P+ Y+T + C+ + A ++ E M + V Y L+ GLC
Sbjct: 200 LHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNILISGLCR 259
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A + M S+G P+ L+ G ++GK+ EA ++ + G P +
Sbjct: 260 DERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMSTEGVRPSFQS 319
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIV 438
+ +++ +C+ + + VL ++V
Sbjct: 320 YKLLIDGLCSDDCVGDAHLVLKQMV 344
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AFDLFKS G PN+ +Y +++ G + A +L M GV P +SY++L+
Sbjct: 266 AFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMSTEGVRPSFQSYKLLID 325
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
GLC V A +L+ M+ +GFVP ++T LL S+
Sbjct: 326 GLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLLTSM 362
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A L MP C P+ ++ ++ L + ++V + G + + L+K
Sbjct: 126 AMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVK 185
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C GK DEA +L E+ K G P+ T+ + +C +++K E+ + K +I
Sbjct: 186 GLCQYGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAA 245
Query: 445 DTRI 448
DT +
Sbjct: 246 DTVV 249
>gi|357488057|ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515651|gb|AES97274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 504
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 196/387 (50%), Gaps = 9/387 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYAS-RQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P + ++I +Q +PL A EIF+ A + P + H+ Y +I LG + + D++
Sbjct: 12 NPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSGRLKEMSDLIE 71
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+K + S+F IK YA+ L D A+ ++++ +FNC + N +LE++V +
Sbjct: 72 QMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNTLLEIMV-NE 130
Query: 180 NYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N L A LF +S+ V ++ N++M A C +A +F +M +G P+ ES
Sbjct: 131 NKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQGCYPNRES 190
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLN----KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
Y I+M+GLC+ +++ A LL M KG D + Y TLL++LC K EA ++L
Sbjct: 191 YLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGKFDEAVEIL 250
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCD 353
++ KG YN + + C +G+ + K + + G +P+ SY ++ L +
Sbjct: 251 GKILRKGLKAPKRCYNRLDISQCGDGKDAEVTKRWIHEALVRGSVPSTASYTSMAVDLYE 310
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE-LLKAGEAPHED 412
+G D A K + M + F P S+ A + C VGKVDEA V+EE +++ P+
Sbjct: 311 EGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNAT 370
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +++ + + E LN++ K
Sbjct: 371 VYTILLKNLGGVGNSTSVLESLNKMSK 397
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G +P+T SY M G I A + +M +R P + + LC+ +V+
Sbjct: 292 RGSVPSTASYTSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDE 351
Query: 255 AVDLLE-DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTV 312
A+ ++E DM+ +P+ YT LL +L + L +M K C D Y +
Sbjct: 352 AIKVIEEDMVEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADKETYCIL 411
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ CRE + ++A ++LE M P +Y L+ GLC G A +++ MIS+G
Sbjct: 412 LEMLCRERKYLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDMISQGK 471
Query: 373 SPHFSVSHALIKGFCNVG 390
P SV ++L FCN G
Sbjct: 472 LPEISVWNSLASSFCNSG 489
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNK-MFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P + + A C G + A + + M E +P+ Y IL++ L ++
Sbjct: 331 PKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNATVYTILLKNLGGVGNSTSVLE 390
Query: 258 LLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L M K + D +Y LL LCR++K EA +LL +M +K P YN ++ G
Sbjct: 391 SLNKMSKKVNCMADKETYCILLEMLCRERKYLEASQLLEQMSIKSYWPCANTYNLLIEGL 450
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C GR +A LEDM S G LP + + +L C+ GM V+
Sbjct: 451 CSLGRQYEAVMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVS 494
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 1/206 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S ++Y + + L D ++I +K + S+F + + D A+K
Sbjct: 297 STASYTSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEAIKVI 356
Query: 154 R-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E NC P +L+ L N L K + K + + ++Y I++ C
Sbjct: 357 EEDMVEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLC 416
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
A L +M + P +Y +L++GLC + AV LEDM+++G +P+
Sbjct: 417 RERKYLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEIS 476
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L +S C ++ + + R++
Sbjct: 477 VWNSLASSFCNSGMMKVSTETFDRIR 502
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 3/311 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI Y + D A +SM +P N I+ L ++ A++
Sbjct: 43 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLC-REGSMKEAWE 101
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G P+ +YN ++ +C G+ A + +M GV P V +Y L+ +C
Sbjct: 102 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC 161
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +NRA++ + M +G P+ +YTTL++ R+ L EAY++L M G +P +V
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVV 221
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN + G C R +A V+++M G P++VSY T++ G C +G D A + Q M
Sbjct: 222 TYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 281
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ KG SP +LI+G C + ++ EAC + +E+L G P E T+ ++ C ++
Sbjct: 282 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 341
Query: 428 EKLGEVLNEIV 438
K + +E++
Sbjct: 342 NKALHLHDEMI 352
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 140/265 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ F ++G LPN +YN ++ A+C G I A+ L M +G+ P++ SY +
Sbjct: 26 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 85
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLCR+ + A ++LE+M KGF PD ++Y TLLN C++ +A + M G
Sbjct: 86 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+P +V Y ++ C+ A + + M G PN +Y TL+ G QG+ + A
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M GFSP +A I G C + +++EA GV++E+++ G AP ++ I+
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C E+++ ++ E+V+ + D
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDA 290
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 134/243 (55%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V PN +YNI++R FC G++ F +M G +P+V +Y L+ C+ +++ A
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL+ M +KG P+ +SY ++N LCR+ ++EA+++L M KG PD V YNT++ G+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+EG A + +M NG P++V+Y L+ +C + A ++ M +G P+
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
LI GF G ++EA +L E+ ++G +P T+ + C E ME+ V+ E
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 437 IVK 439
+V+
Sbjct: 246 MVE 248
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 169/359 (47%), Gaps = 18/359 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + +A+ + + ++ +T LI ++ L + A + M
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211
Query: 157 LEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
E P N + V R + A + + + G+ P+ SY+ ++ FC G
Sbjct: 212 TESGFSPSVVTYNAFIHGHCVLER--MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A+ + +M E+GV PD +Y L+QGLC ++ A DL ++ML+ G PD +YT
Sbjct: 270 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 329
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL+N+ C + L +A L M KG PD V Y+ ++ G ++ R +A ++L +
Sbjct: 330 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 389
Query: 336 GCLPNLVSYRTLV---------------GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+P+ V+Y TL+ G C +G+ A + + M+ + P +V +
Sbjct: 390 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 449
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I G C G + +A + +E++ +G PH T + ++ + E++ EV+ + ++
Sbjct: 450 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 508
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 9/333 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN +Y ++I L R +IL + + + TP TY L+ Y +
Sbjct: 77 QPNL----ISYNVIINGLCREGSMKEAWEILEEMGYKGF--TPDEVTYNTLLNGYCKEGN 130
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+AL M+ P ++ + RN L A + F G+ PN ++Y
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN-LNRAMEFFDQMRIRGLRPNERTYT 189
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ F G ++ AY + N+M E G P V +Y + G C ++ A+ ++++M+ K
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD +SY+T+++ CRK +L A+++ M KG +PD V Y++++ G C R +A
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 309
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
C + ++M G P+ +Y TL+ C +G + A MI KGF P LI G
Sbjct: 310 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 369
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ EA +L +L+ P + T+ ++
Sbjct: 370 LNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M V P+V +Y IL++G C ++ + + +M G +P+ ++Y TL+++ C+ +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA+ LL M KG P+++ YN ++ G CREG +A ++LE+M G P+ V+Y T
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C +G F A M+ G SP ALI C ++ A +++ G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P+E T+ ++ + + +LNE+ +
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE 213
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 21/345 (6%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E FD R R + TY LI R + IL + + +PS+ TY
Sbjct: 169 AMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF--SPSVVTYNA 225
Query: 138 KIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
I+ L + AL + M+E P + I+ + L AF + + +
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC-RKGELDRAFQMKQEMVEK 284
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV P+ +Y+ +++ C ++ A L +M + G+ PD +Y L+ C + +N+A
Sbjct: 285 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 344
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV-- 313
+ L ++M++KGF+PD ++Y+ L+N L ++ + REA +LL ++ + P V Y+T++
Sbjct: 345 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN 404
Query: 314 -------------LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GFC +G +A +V E M P Y ++ G C G A
Sbjct: 405 CSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 464
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ MI GF PH LIK G +E V+ + L++
Sbjct: 465 FNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS 509
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 2/309 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ + YP + +T LI+ + +A+K M + C P N +L +
Sbjct: 231 LQRDCYPDVIT-YTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYN-VLVNGICKEG 288
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A G PN ++NI++R+ C G A L M +G P V ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LCRK + RA+D+LE M G P++LSY LL+ C++KK+ A + L RM +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YNT++ C++G+ DA ++L + S GC P L++Y T++ GL G A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M +K P +L+ G GKVDEA E + G P+ T+ I+
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528
Query: 421 ICAGEEMEK 429
+C + ++
Sbjct: 529 LCKTRQTDR 537
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 181/356 (50%), Gaps = 17/356 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
++G+ + + I ++L E P + TY +I Y ++ + AL M +
Sbjct: 149 RMGKTRKAAKILEVL-----EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SV 200
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N IL L L+ A ++ + P+ +Y I++ A C + + A
Sbjct: 201 SPDVVTYNTILRSLCDS-GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAM 259
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +RG PDV +Y +L+ G+C++ +++ A+ L DM + G P+ +++ +L S+
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---RAIDACKVLEDMPSNGCL 338
C + +A KLL M KG +P +V +N ++ CR+G RAID +LE MP +GC
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID---ILEKMPKHGCQ 376
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN +SY L+ G C + D A +Y++ M+S+G P + ++ C GKV++A +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
L +L G +P T+ ++ + + K ++L+E+ ++K DT + +G
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 175/350 (50%), Gaps = 17/350 (4%)
Query: 97 TYLILILKL----GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY ILI G + L+D++ TP + TY L+ + D A+
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEM------RDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K M C+P N IL + + ++ A L + G P+ ++NI++
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWM-DAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G + A + KM + G P+ SY L+ G C++ +++RA++ LE M+++G PD
Sbjct: 354 LCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y T+L +LC+ K+ +A ++L ++ KGC+P ++ YNTV+ G + G+ A K+L+
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + P+ ++Y +LVGGL +G D A K+ G P+ ++++ G C
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNE 436
+ D A L ++ G P E ++ +++ + A E +E L E+ N+
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 32/289 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F ++ HG +P+ ++R FC G A + + G +PDV +Y +
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177
Query: 242 LMQGLCRKSQVN--------------------------------RAVDLLEDMLNKGFVP 269
++ G C+ ++N +A+++L+ ML + P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++YT L+ + CR + +A KLL M+ +GC PD+V YN +V G C+EGR +A K L
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
DMPS+GC PN++++ ++ +C G + A+K + M+ KGFSP + LI C
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G + A +LE++ K G P+ ++ ++ C ++M++ E L +V
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
Query: 141 AESNLPDRALKTFR-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
AE L D K F S++ FN IL + + L A D+ + KHG P
Sbjct: 328 AEKLLADMLRKGFSPSVVTFN----------ILINFLCRKGLLGRAIDILEKMPKHGCQP 377
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N+ SYN ++ FC + A +M RG PD+ +Y ++ LC+ +V AV++L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ +KG P ++Y T+++ L + K +A KLL M+ K PD + Y+++V G RE
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ +A K + G PN V++ +++ GLC D A ++ MI++G P +
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSY 557
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAG 406
LI+G G EA +L EL G
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKG 584
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 33/266 (12%)
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F SA+ VL + +S N +R G++ + M G +PD+ L++G CR
Sbjct: 91 FSSANSSFVLEDVESNN-HLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTL--------------------------------SYTT 276
+ +A +LE + G VPD + +Y T
Sbjct: 150 MGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNT 209
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L SLC KL++A ++L RM + C PD++ Y ++ CR+ A K+L++M G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG 269
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P++V+Y LV G+C +G D A K++ M S G P+ + +++ C+ G+ +A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQIC 422
+L ++L+ G +P T+ +++ +C
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLC 355
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 11/224 (4%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG S A + F V+ DVES L Q L R ++ LE+M+ G VPD +
Sbjct: 88 NGHFSSANSSF-------VLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
TTL+ CR K R+A K+L ++ G PD++ YN ++ G+C+ G +A VL+ M
Sbjct: 140 CTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ P++V+Y T++ LCD G A + + M+ + P LI+ C V
Sbjct: 200 VS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+A +L+E+ G P T+ ++V IC +++ + LN++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 38/247 (15%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M + C+P N +L + R A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDR-AI 399
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G P+ +YN M+ A C +G + A + N++ +G P + +Y ++ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
+ + +A+ LL++M K PDT++Y++L+ L R+ K+ EA K
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519
Query: 294 ---------LCR-------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
LC+ M +GC P Y ++ G EG A +A ++L +
Sbjct: 520 VTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNE 579
Query: 332 MPSNGCL 338
+ + G +
Sbjct: 580 LCNKGLM 586
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 183/408 (44%), Gaps = 40/408 (9%)
Query: 44 PEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILIL 103
P E S++ + I + Q L A F +A P F+HS ++ IL+
Sbjct: 56 PRHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKSIPGFQHSVQSFHILVE 115
Query: 104 KLGRAKYFSLIDDILITLKSEHYP--VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
LGR+K F+++ D LI + +T +F + Y+ ++LPD A+++F M EF
Sbjct: 116 ILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVRMDEFGI 175
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
KP ++ +L L + ++R A F H +L TK+Y+I++ + GD A
Sbjct: 176 KPSIIDVDLLLYTLCK-KKHVRQAQQFFDQVKSHFLL-TTKTYSILINGWGKIGDSGKAR 233
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS- 280
LF+ M E+G D+ +Y L++ LC+ V+ A+D L DML+K PD +Y+ + S
Sbjct: 234 ELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSY 293
Query: 281 ----------------------------------LCRKKKLREAYKLLCRMKVKGCNPDI 306
LC+ KK+ EAY+LL M G PD
Sbjct: 294 CDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDT 353
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN + C A K++ M + C P+ +Y ++ L G FD A + +
Sbjct: 354 WSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWEC 413
Query: 367 MISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDT 413
M K F P S +I G C GK++EAC ++ G P++ T
Sbjct: 414 MGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTT 461
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F +M E G+ P + +L+ LC+K V +A D + F+ T +Y+ L+N +
Sbjct: 167 FVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFF-DQVKSHFLLTTKTYSILINGWGK 225
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+A +L M +GC+ D++ YN ++ C+ G +A L DM S P+ +
Sbjct: 226 IGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFT 285
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y + CD A + M P+ + +IK C + KV+EA +L+E++
Sbjct: 286 YSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMI 345
Query: 404 KAGEAPHEDTW 414
+G P DTW
Sbjct: 346 SSGLKP--DTW 354
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 147/325 (45%), Gaps = 13/325 (4%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR-ILELLVTHRNYLRPA 185
P+ P L + +I ++ P R LE + P Q++ ++E ++ N+L +
Sbjct: 37 PLLPELVNEISRIVSDHRHP-------RHDLELSLTPFSTQISTDLVEQVLKRCNHLGFS 89
Query: 186 FDLFKSAHKH--GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV--ESYRI 241
F K G + +S++I++ + +I + + E + E + I
Sbjct: 90 AHRFFLWAKSIPGFQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWI 149
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ R + A+ M G P + LL +LC+KK +R+A + ++K
Sbjct: 150 IFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHF 209
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
Y+ ++ G+ + G + A ++ + M GC +L++Y L+ LC G D A
Sbjct: 210 LLTTKT-YSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAM 268
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M+SK P I+ +C+ V A GVL+++ + P+ T+ I+ ++
Sbjct: 269 DFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRL 328
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C +++E+ ++L+E++ +K DT
Sbjct: 329 CKIKKVEEAYQLLDEMISSGLKPDT 353
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 183/369 (49%), Gaps = 45/369 (12%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNST---YLILILKLGRAKYFSLIDDILITL 121
V K++ + A FD+A+ Q + H T L +L+L R K D L
Sbjct: 814 VGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPK------DALQVY 867
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+++ +P++FT+ I I+ D
Sbjct: 868 RNK-LCCSPNMFTFTILIHGLCRAGD---------------------------------- 892
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-PDVESYR 240
+ A++L K +HGV N +N++++ C + A LF +M E G PDV +Y
Sbjct: 893 IGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYS 952
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ L + +V+ A L+EDM++KG P+ ++Y++LL+ LC+ KL EA LL RM
Sbjct: 953 TIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 1012
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC+P+IV YNT++ G C+ GR +A +LE+M GC PN+V+Y L+ C G + A
Sbjct: 1013 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 1072
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+++M+ KG+ P+ ++L+ FC +V+ AC +L +++ G P+ ++ ++
Sbjct: 1073 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 1132
Query: 421 ICAGEEMEK 429
+C ++ +
Sbjct: 1133 LCKATKVHE 1141
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ +S D A + M+ C P + +L L L A
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC-KAGKLDEATA 1004
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G PN +YN ++ C G I AY L +M + G P+V +Y +L+ C
Sbjct: 1005 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 1064
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A+ L+E M+ KG+VP+ +Y +LL+ C+K ++ A +LL M KGC P++V
Sbjct: 1065 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 1124
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSN-------------------------------- 335
YNTV+ G C+ + + +LE M SN
Sbjct: 1125 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184
Query: 336 ---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGK 391
GC PNLV+Y +LV GLC FD A+ ++ M K G SP + +I G C +
Sbjct: 1185 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 1244
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
VD A + ++L G AP + T+ +++ +C M++ VL ++K
Sbjct: 1245 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 152/310 (49%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ TY ++ ++ N +RA + + M++ C P + I+ LR A D
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFC-KAGKLREAHD 426
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G P+ + ++ A C I A L PDV +Y IL+ LC
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALC 486
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ A L+ M+ PD ++Y ++++ LC+ +++ +A+ L RM+ G PD+V
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVV 546
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ V+ FC++ A K+LE M C+P++V+Y L+ GLC G D A Q M
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G +P+ + LI G C + KV++A +LE + K P T+ ++ +C +
Sbjct: 607 LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRL 666
Query: 428 EKLGEVLNEI 437
E+ VL E+
Sbjct: 667 EEAWRVLREM 676
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 157/312 (50%), Gaps = 4/312 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY L+ + D A++ R M E +P N I+ + RN + A
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFC-RRNDMERAHQ 391
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + + G P+ +Y+ ++ FC G + A+ L +M RG PDV L+ LC
Sbjct: 392 VLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC 451
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + ++ A +LL + PD ++Y+ L+++LC+ K+L EA L M C PD+V
Sbjct: 452 KAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVV 511
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN+VV G C+ R DA + + M + G +P++V+Y ++ C D A K ++ M
Sbjct: 512 TYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM 571
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
P ALI G C G VD+A V +E+L G AP+ T+ ++ +C ++
Sbjct: 572 KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKV 631
Query: 428 EKLGEVLNEIVK 439
E+ E+L EI++
Sbjct: 632 EQAAEML-EIMR 642
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 143/242 (59%), Gaps = 1/242 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN ++ I++ C GDI AY L +M GV +V + ++++GLC +++ A++L
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 259 LEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
++M G PD +Y+T+++SL + K+ +A +L+ M KGC+P++V Y++++ G C
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ G+ +A +L+ M +GC PN+V+Y T++ G C G D A ++ M+ G P+
Sbjct: 995 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ FC GK ++A G++E +++ G P+ T+ ++ C +E+E+ ++L+ +
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114
Query: 438 VK 439
++
Sbjct: 1115 IQ 1116
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 191/413 (46%), Gaps = 21/413 (5%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
+S EQ ++ + + SP V K++ DP A F++A + ++H L
Sbjct: 74 ASDEQALRVALDEYRGQL-SPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCL 132
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
+ L +A +S D+ + + ++ LI + + + L + E N
Sbjct: 133 LNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAG---KILPAYELFDEMNR 189
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDL---------FKSAHKHGVLPNTKSYNIMMRAFC 212
K L H++ LR D F+ K P++ +YN M+
Sbjct: 190 KGLKAHAG-------VHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLS 241
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
+ + A L +M + G P+V SY ++ G C+ ++V A+ LLE M+ +G PD +
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SYTT++N LC+ ++ EA +++ +M +GC P+++ Y T+V GFCR G A +++ M
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN ++Y ++ C + + A + +Q+MI G P +I GFC GK+
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
EA +LE++++ G P ++ +C ++ E+L + ++ D
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 1/309 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ +I + ++ A M+ C+P L+ +++ L + A +L + +
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC-KAAAIDSAQELLRMS 466
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
P+ +Y+I++ A C + A + + M + PDV +Y ++ GLC+ ++
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A L + M G +PD ++Y+ +++S C+ L A+K+L RMK C PD+V Y+ +
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G A V ++M GC PNLV+Y TL+ GLC + A + +++M +
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+P LI G CN +++EA VL E+ G P T+ ++ + +E + +
Sbjct: 647 TPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQ 706
Query: 433 VLNEIVKVE 441
+L E+ E
Sbjct: 707 LLKEMEATE 715
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 2/291 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ FR M + C P N ++ L + + L A L + +G PN SYN ++
Sbjct: 215 AVLHFREMSK-TCPPDSVTYNTMINGL-SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 272
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC + A L +M RG PDV SY ++ GLC+ QV+ A +++ M+ +G
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++Y TL++ CR L A +L+ +M +G P+ + YN ++ FCR A +V
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ M GC P+ ++Y T++ G C G A ++ MI +G P + LI C
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+D A +L + AP + +++ +C + + + L+ +VK
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVK 503
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 164/344 (47%), Gaps = 2/344 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ ILI L RA ++L + P L +IK + D AL+ F+ M
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 157 LEF-NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
E +C P + I++ LV + A L + G PN +Y+ ++ C G
Sbjct: 939 EESGSCPPDVFTYSTIVDSLV-KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L +M G P++ +Y ++ G C+ +++ A LLE+M++ G P+ ++YT
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
LL++ C+ K +A L+ M KG P++ YN+++ FC++ AC++L M
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC+PN+VSY T++ GLC ++ M+S P + +I C +VD A
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 1177
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ + ++G P+ T+ +V +C ++ +L E+ +
Sbjct: 1178 YELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 1221
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 163/351 (46%), Gaps = 11/351 (3%)
Query: 76 LLAKEIFDYASRQPNFRHSNSTYLIL--ILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
L A E+FD +R+ H+ IL + G+ D ++ + P
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCS------DAVLHFREMSKTCPPDSV 231
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY +I ++S+ D A++ M++ P N +L N + A L +
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC-KANRVENALWLLEQ 290
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G P+ SY ++ C + A + +KM +RG P+V +Y L+ G CR
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ AV+L+ M +G+ P+ ++Y +++ CR+ + A+++L M GC PD ++Y+T
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ GFC+ G+ +A +LE M GC P++ TL+ LC D A++ +++ I
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P LI C ++ EA L+ ++K P T+ +V +C
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLC 521
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 154/312 (49%), Gaps = 5/312 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++F+Y ++ + ++N + AL M+ C P ++ L + + A
Sbjct: 262 APNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLC-KLDQVDEAC 320
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G PN +Y ++ FC GD+ A L KM ERG P+ +Y +M
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVF 380
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR++ + RA +L+ M+ G PD ++Y+T+++ C+ KLREA+ LL +M +GC PD+
Sbjct: 381 CRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDV 440
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+T++ C+ AID+ + L M C P++V+Y L+ LC A+ ++
Sbjct: 441 ACLSTLIDALCKAA-AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+M+ P ++++ G C ++++A + + + AG P T+ +++ C
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDN 559
Query: 426 EMEKLGEVLNEI 437
++ ++L +
Sbjct: 560 NLDSAFKMLERM 571
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 154/310 (49%), Gaps = 8/310 (2%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLV-THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ML NC P N I++ + T+R + A++LF + G PN +YN ++
Sbjct: 1146 LEQMLSNNCVPDIVTFNTIIDAMCKTYR--VDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203
Query: 212 CFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C + A L +M + G PD+ +Y ++ GLC+ +V+RA L ML+ G PD
Sbjct: 1204 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 1263
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+ +++SLC+ + + EA +L M G +P + Y T++ GFC+ G A ++L+
Sbjct: 1264 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 1323
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ S G P++V++ + L +G A + ++ M+ G P + L+KGFC+
Sbjct: 1324 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 1383
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK-LGEVLNEIVKVEIKGDTRI- 448
++A + E + + G P T+ +V + + + L EV +V K + +
Sbjct: 1384 LTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELS 1443
Query: 449 --VEAGIGLE 456
+EA I +E
Sbjct: 1444 SKLEASIEVE 1453
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I ++ D A + F + E C P N ++ L R + + + L +
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G P+ +YN ++ C + + AY LF +M G+ PD +Y I++ LC+ +
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A ++LE ML GF P ++Y TL++ C+ L +A ++L + KG PD+V ++
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + GR A ++LE M G +P+ V+Y TL+ G CD + + A ++M G
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400
Query: 373 SPHFSVSHALI 383
P + L+
Sbjct: 1401 EPDNATYTTLV 1411
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 18/254 (7%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY L+K + +++L + A+ F M + C+P ++ LV ++Y
Sbjct: 1365 LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLL 1424
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN------------KMFERGVM 233
++ KS G N + + + + D+ + + + K+FE
Sbjct: 1425 AEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ 1484
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+V + ++ Q +A L M +G PD +++ +LL C L A
Sbjct: 1485 RNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDE 1544
Query: 294 LCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ + G P + H++ V+ R G +A ++ MP C P+ ++ L+
Sbjct: 1545 FVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMP---CKPSAATWNCLLSAYK 1601
Query: 353 DQGMFDVAKKYMQL 366
G F+ A + +L
Sbjct: 1602 ICGDFERALRVAEL 1615
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 3/312 (0%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I I A N +A+K M + CKP N ++ + L A
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING-ICKEGRLDEAIK 300
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ +G PN ++NI++R+ C G A L M +G P V ++ IL+ LC
Sbjct: 301 FLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLC 360
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
RK + RA+D+LE M G +P++LSY LL+ C++KK+ A + L M +GC PDIV
Sbjct: 361 RKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIV 420
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ C++G+A A ++L + S GC P L++Y T++ GL G + A + ++ M
Sbjct: 421 TYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
KG P L++G GKVDEA + ++ P T+ I+ +C ++
Sbjct: 481 RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 540
Query: 428 EKLGEVLNEIVK 439
+ + L +V+
Sbjct: 541 SRAIDFLAYMVE 552
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 177/345 (51%), Gaps = 17/345 (4%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G+ + + I +IL E+ P + TY LI Y +S D+AL+ M + P
Sbjct: 156 GKTRKATRIMEIL-----ENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAP 207
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N IL L L+ A ++ + P+ +Y I++ A C + + A L
Sbjct: 208 DVVTYNTILRSLC-DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKL 266
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++M ++G PDV +Y +L+ G+C++ +++ A+ L +M G P+ +++ +L S+C
Sbjct: 267 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE---GRAIDACKVLEDMPSNGCLPN 340
+ +A +LL M KGC+P +V +N ++ CR+ GRAID VLE MP +GC+PN
Sbjct: 327 TGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAID---VLEKMPKHGCMPN 383
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+SY L+ G C + D A +Y+++M+S+G P + L+ C GK D A +L
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L G +P T+ ++ + + E E+L E+ + +K D
Sbjct: 444 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 164/332 (49%), Gaps = 5/332 (1%)
Query: 114 IDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
ID L L E V P + TY +++ +S A++ ++ C P +
Sbjct: 193 IDKALQVL--ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTIL 250
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+E + + + A L K G P+ +YN+++ C G + A N M G
Sbjct: 251 IEA-TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG 309
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
P+V ++ I+++ +C + A LL DML KG P +++ L+N LCRK+ L A
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAI 369
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L +M GC P+ + YN ++ GFC+E + A + LE M S GC P++V+Y TL+ L
Sbjct: 370 DVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 429
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G D A + + + SKG SP + +I G VGK + A +LEE+ + G P
Sbjct: 430 CKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDI 489
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ + ++++ ++ +++ + IK
Sbjct: 490 ITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 151/294 (51%), Gaps = 3/294 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D A+K +M + C+P N IL + + ++ A
Sbjct: 277 PDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWM-DAER 335
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ ++NI++ C + A + KM + G MP+ SY L+ G C
Sbjct: 336 LLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFC 395
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++RA++ LE M+++G PD ++Y TLL +LC+ K A ++L ++ KGC+P ++
Sbjct: 396 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLI 455
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ A ++LE+M G P++++Y TL+ GL +G D A K M
Sbjct: 456 TYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
P +A++ G C + A L +++ G P + T+ +++ I
Sbjct: 516 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 134/245 (54%), Gaps = 3/245 (1%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G +P+ + ++R FC +G A + + G +PDV +Y +L+ G C+ ++++
Sbjct: 136 QGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK 195
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ +LE M PD ++Y T+L SLC KL+EA ++L R + C PD++ Y ++
Sbjct: 196 ALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 252
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C + A K+L++M GC P++V+Y L+ G+C +G D A K++ M G P
Sbjct: 253 ATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP 312
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ + +++ C+ G+ +A +L ++L+ G +P T+ +++ +C + + +VL
Sbjct: 313 NVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 372
Query: 435 NEIVK 439
++ K
Sbjct: 373 EKMPK 377
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 3/265 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y P++ T+ +++ + A + ML C P N ++ L R L
Sbjct: 308 YGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKR-LLG 366
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D+ + KHG +PN+ SYN ++ FC + A M RG PD+ +Y L+
Sbjct: 367 RAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL 426
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ + + AV++L + +KG P ++Y T+++ L + K A +LL M+ KG
Sbjct: 427 TALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLK 486
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDI+ Y+T++ G EG+ +A K+ DM P+ V+Y ++ GLC A +
Sbjct: 487 PDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 546
Query: 364 MQLMISKGFSPHFSVSHALIKGFCN 388
+ M+ KG P + LI+G +
Sbjct: 547 LAYMVEKGCKPTKATYTILIEGIAD 571
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI +R NG++ +M +G +PDV + L++G CR + +A ++E + N
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G VPD ++Y L+ C+ ++ +A ++L RM V PD+V YNT++ C G+ +
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKE 227
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +VL+ C P++++Y L+ C+ A K + M KG P + LI
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
G C G++DEA L + G P+ T +I+ +C+
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCS 326
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M + C P N +L + R A
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR-AI 404
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G P+ +YN ++ A C +G A + N++ +G P + +Y ++ GL
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + A +LLE+M KG PD ++Y+TLL L + K+ EA K+ M+ P
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN ++LG C+ + A L M GC P +Y L+ G+ D+G+ + A + +
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNE 584
Query: 367 MISKGFSPHFSVSHALIK 384
+ S+GF S +K
Sbjct: 585 LCSRGFVKKSSAEQVAVK 602
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 3/197 (1%)
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I ++ L R ++ + LE M+ +G +PD ++ T+L+ CR K R+A +++ ++
Sbjct: 112 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENS 171
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD++ YN ++ G+C+ G A +VLE M P++V+Y T++ LCD G A
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEA 228
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ + + + P LI+ CN V +A +L+E+ K G P T+ +++
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288
Query: 421 ICAGEEMEKLGEVLNEI 437
IC +++ + LN +
Sbjct: 289 ICKEGRLDEAIKFLNNM 305
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L L R +L E K L RM +G PD++ +++ GFCR G+ A +++E + ++G
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P++++Y L+GG C G D K +Q++ +P + +++ C+ GK+ EA
Sbjct: 174 VPDVITYNVLIGGYCKSGEID---KALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAME 230
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
VL+ ++ P T+ +++ C + + ++L+E+ K K D
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 278
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 209/462 (45%), Gaps = 48/462 (10%)
Query: 23 PPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIG-----------SPCRVQKLIAS 71
PP S C S S +S + ++S S S + +P +++ +
Sbjct: 22 PPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRR 81
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
QSD ++ D+AS+QPNF S+ Y ++ KLG+ F + +L +K +
Sbjct: 82 QSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRG 141
Query: 132 LFTYLIKIYAESNLPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
F LI+ YA+ L D A+ M EF K N +L +LV N L+ +
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDG-NKLKLVEIVNS 200
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL---- 246
G+ P+ ++NI+++A C I A + +M G+ PD +++ LMQG
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260
Query: 247 -------------------------------CRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
C++ ++ + +++M N+GF PD ++
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L+N LCR ++ A ++L M +G +PDI YN+++ G C+ G +A ++L M
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
PN V+Y TL+ LC + + A + +++ SKG P ++LI+G C A
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ EE+ G P E T+ M++ +C+ +E+ +L E+
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 136/258 (52%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+++ A ++ + G P+ +YN ++ C G++ A + N+M R P+ +Y
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ LC+++QV A +L + +KG +PD ++ +L+ LC R A +L MK K
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC+PD YN ++ C GR +A +L++M S+GC N+V+Y TL+ G C + A
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEA 510
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ M +G S + + LI G C +V+EA +++++L G P + T+ ++
Sbjct: 511 EEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570
Query: 421 ICAGEEMEKLGEVLNEIV 438
C +++K +++ +
Sbjct: 571 FCRAGDIKKAADIVQTMT 588
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 174/352 (49%), Gaps = 5/352 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
+T+ ILI L RA + IL+ + Y ++P FT L++ + E + AL+
Sbjct: 212 TTFNILIKALCRAH--QIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIR 269
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M+ C P +L + G P+ ++N ++ C
Sbjct: 270 EQMVAAGC-PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A + + M + G PD+ +Y L+ GLC+ +V AV++L M+ + F P+T++
Sbjct: 329 IGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL+++LC++ ++ EA +L + KG PD+ +N+++ G C A ++ E+M
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ GC P+ +Y L+ LC +G + A ++ M S G S + + LI GFC +++
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
EA + +E+ G + + T+ ++ +C +E+ +++++++ +K D
Sbjct: 509 EAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ C + A L + +G++PDV ++ L+QGLC + A++L
Sbjct: 384 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M KG PD +Y L++SLC + +L EA LL M+ GC+ ++V YNT++ GFC+
Sbjct: 444 FEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCK 503
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R +A ++ ++M G N+V+Y TL+ GLC + A + M M+ +G P
Sbjct: 504 NKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFT 563
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++L+ FC G + +A +++ + G P T+ ++ + +E +L
Sbjct: 564 YNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR--- 620
Query: 439 KVEIKG 444
V++KG
Sbjct: 621 TVQLKG 626
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 164/318 (51%), Gaps = 5/318 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P+ TY LI + N + A + R + P N +++ L N+ R A
Sbjct: 383 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNH-RLAM 441
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF+ G P+ +YN+++ + C G + A +L +M G +V +Y L+ G
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A ++ ++M +G + ++Y TL++ LC+ +++ EA +L+ +M ++G PD
Sbjct: 502 CKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN+++ FCR G A +++ M SNGC P+ V+Y TL+ GL G ++A + ++
Sbjct: 562 FTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRT 621
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ KG + +IK + EA + E+++ G+ P T+ ++ +C+G
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG- 680
Query: 427 MEKLGEVLNEIVKVEIKG 444
+GE ++ +V++ KG
Sbjct: 681 -GPIGEAVDFLVEMTDKG 697
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 133/324 (41%), Gaps = 44/324 (13%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI + AL + M C N +++ ++ + A +
Sbjct: 454 PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR-IEEAEE 512
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F G+ N +YN ++ C N + A L ++M G+ PD +Y L+ C
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC 572
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL----------------------------- 278
R + +A D+++ M + G PD+++Y TL+
Sbjct: 573 RAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQ 632
Query: 279 ------NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI-DACKVLED 331
+L R+K+ EA +L M KG PD V Y V G C G I +A L +
Sbjct: 633 TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVE 692
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH-ALIKGFCNVG 390
M G LP+ S+ L GLC M D K + ++ + +FS S ++I GF +
Sbjct: 693 MTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQA---NFSDSEVSMIMGFLKIR 749
Query: 391 KVDEACGVLEELLKAGEAPHEDTW 414
K +A L +L + E P + W
Sbjct: 750 KFQDALATLGRILSSRE-PKKAFW 772
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS----LIDDILITLKSEHYPVTPSLF 133
A+EIFD Q R+ TY LI L + + L+D +L+ + P F
Sbjct: 510 AEEIFDEMELQGISRNV-VTYNTLIDGLCKNRRVEEAAQLMDQMLME------GLKPDKF 562
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY L+ + + +A ++M C+P ++ L ++ + A L ++
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI-LGLSKAGRVELASRLLRT 621
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G++ ++YN +++A S A LF +M E+G PD +Y+++ +GLC
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGG 681
Query: 252 -VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ AVD L +M +KGF+PD S+ L LC KL+ R+ + D
Sbjct: 682 PIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSD--SEV 739
Query: 311 TVVLGFCREGRAIDACKVL 329
++++GF + + DA L
Sbjct: 740 SMIMGFLKIRKFQDALATL 758
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 2/309 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ E YP + +T LI+ + +A+K M CKP N ++ +
Sbjct: 8 LEKECYPDVIT-YTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC-KEG 65
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A S +G PN ++NI++R+ C G A L +M +G P V ++
Sbjct: 66 RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LCRK + RA+D+LE M G P++LSY LL+ C++KK+ A + L M +
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YNT++ C++G+ A ++L + S GC P L++Y T++ GL G D A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ + M KG P +LI G GKV+EA ++ G P+ T+ I+
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Query: 421 ICAGEEMEK 429
+C ++ ++
Sbjct: 306 LCKAQQTDR 314
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 140/250 (56%), Gaps = 6/250 (2%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +Y I++ A C + A L ++M RG PDV +Y +L+ G+C++ +++ A+
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L M + G P+ +++ +L S+C + +A KLL M KGC+P +V +N ++ CR
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 319 EG---RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+G RAID +LE MP++GC PN +SY L+ G C + D A +Y+++M+S+G P
Sbjct: 134 KGLLGRAID---ILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ ++ C GKVD A +L +L G +P T+ ++ + + ++ E+L+
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250
Query: 436 EIVKVEIKGD 445
E+ +K D
Sbjct: 251 EMRGKGLKPD 260
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 161/311 (51%), Gaps = 5/311 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY L+ + D A+K SM + +P N IL + + ++ A
Sbjct: 49 PDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWM-DAEK 107
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ ++NI++ C G + A + KM G P+ SY L+ G C
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFC 167
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++RA+ LE M+++G PD ++Y T+L +LC+ K+ A +LL ++ KGC+P ++
Sbjct: 168 KEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ A ++L +M G P++++Y +L+ GL +G + A K+ +
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ ++++ G C + D A L ++ G P E ++ +++ I A E +
Sbjct: 288 EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI-ANEGL 346
Query: 428 EKLG-EVLNEI 437
K E+LNE+
Sbjct: 347 AKEALELLNEL 357
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A K M+ C P N ++ L + L A D+ + HG PN+ SYN ++
Sbjct: 105 AEKLLTEMVRKGCSPSVVTFNILINFLC-RKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC + A M RG PD+ +Y ++ LC+ +V+ AV+LL + +KG
Sbjct: 164 HGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P ++Y T+++ L + K +A +LL M+ KG PD++ Y++++ G REG+ +A K
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
D+ G PN +Y +++ GLC D A ++ MISKG P LI+G N
Sbjct: 284 FHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343
Query: 389 VGKVDEACGVLEELLKAG 406
G EA +L EL G
Sbjct: 344 EGLAKEALELLNELCSRG 361
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 123/215 (57%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ ++ E+ PDV +Y IL++ C +S V +A+ LL++M ++G PD ++Y L+N +C
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
++ +L EA K L M G P+++ +N ++ C GR +DA K+L +M GC P++V
Sbjct: 63 KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
++ L+ LC +G+ A ++ M + G +P+ + L+ GFC K+D A LE +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ G P T+ ++ +C +++ E+LN++
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL 217
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M C P N +L + R A
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR-AI 176
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G P+ +YN M+ A C +G + A L N++ +G P + +Y ++ GL
Sbjct: 177 QYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 236
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + ++AV+LL +M KG PD ++Y++L+ L R+ K+ EA K ++ G P+
Sbjct: 237 SKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNA 296
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN+++ G C+ + A L M S GC P VSY L+ G+ ++G+ A + +
Sbjct: 297 FTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNE 356
Query: 367 MISKGFSPHFSVSHALIK 384
+ S+G S +++
Sbjct: 357 LCSRGVVKKSSAEQVVVR 374
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 97/174 (55%)
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+++L+ L K PD ++YT L+ + C + + +A KLL M +GC PD+V YN +V G
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+EGR +A K L MPS G PN++++ ++ +C G + A+K + M+ KG SP
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ LI C G + A +LE++ G P+ ++ ++ C ++M++
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR 174
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+VL+ C P++++Y L+ C + A K + M S+G P + L+ G
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
C G++DEA L + G P+ T +I+ +C+ ++L E+V+
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVR 114
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 178/338 (52%), Gaps = 11/338 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L +A+ S D+L + + P +FTY LI + +S D AL+ F
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCF 213
++ +P + +++ L L+ A DLF K G +PNT +YN ++ FC
Sbjct: 175 QLVARGFRPDVVTYSCLIDGLCKE-GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A L +M E G PDV +Y LM G C+ ++++ A DLL M KG PD ++
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDM 332
+T+L++ LCR+ +L +A +L M+ K C+P + YNT++ G+CR + +A K +LE+M
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
C PN+VS+ ++ GLC A + ++ + +P + +I G C KV
Sbjct: 354 D---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 393 DEACGVLEELLKA-GEAPHEDTWVMIVPQICAGEEMEK 429
DEAC V ++L+ G P+ T+ +V +C +++
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDR 448
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 5/270 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +Y ++ A C + A +M R + P+V +Y +L+ GLC+ +V+ A
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
V LL M K VP ++Y +L++ LC+ ++ EAY LL M GC PDI Y T++ G
Sbjct: 101 VALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS-P 374
FC+ ++ DA +V E + + G P++V+Y L+ GLC +G A MI G P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ ++LI GFC +GK+DEA +LE + + G +P T+ ++ C ++ ++L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 435 NEIVKVEIKGDTRIVEAGIGLEDYLIGKTR 464
N++ + KG T V L D L + R
Sbjct: 280 NQMTR---KGLTPDVVTFTSLMDGLCRENR 306
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 134/259 (51%), Gaps = 2/259 (0%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N L A + + PN +Y +++ C G + A L +KM ++ V P +Y
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTY 118
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC+ + + A DLLE+M+ G +PD +YTTL+ C+ KK +A ++ ++
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFD 358
+G PD+V Y+ ++ G C+EGR +A + M +G C+PN V+Y +L+ G C G D
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++ M G SP L+ GFC + ++D+A +L ++ + G P T+ ++
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Query: 419 PQICAGEEMEKLGEVLNEI 437
+C + +L E+
Sbjct: 299 DGLCRENRLSDAVHILGEM 317
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 5/303 (1%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY I+A N A K M N P +++ L + A
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKG-GRVDEAVA 102
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K V P +YN ++ C S AY L +M G +PD+ +Y L+ G C
Sbjct: 103 LLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDI 306
+ + + A+ + E ++ +GF PD ++Y+ L++ LC++ +L+EA L RM K C P+
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN+++ GFCR G+ +A +LE M G P++V+Y TL+ G C D A +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG +P +L+ G C ++ +A +L E+ + +P T+ I+ C +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 427 MEK 429
+E+
Sbjct: 342 LEE 344
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 163/346 (47%), Gaps = 9/346 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L + +D+ + L P+ TY LI ++ A
Sbjct: 83 TYTVLIDGLCKG---GRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ C P ++ + A +F+ G P+ +Y+ ++ C
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKS-DDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198
Query: 215 GDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A LF +M + G MP+ +Y L+ G CR +++ A++LLE M G PD ++
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YTTL+N C+ +L +AY LL +M KG PD+V + +++ G CRE R DA +L +M
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
C P + +Y T++ G C + A+K+M + P+ + +I+G C V +
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSS 376
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EA ++EE + P + ++ +C +++++ V ++++
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 133/245 (54%), Gaps = 5/245 (2%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y +++ C + A KM +G PDV +Y ++ LC +++++ A LE+M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
N+ P+ ++YT L++ LC+ ++ EA LL +M+ K C P V YN+++ G C+ RA
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERA 131
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +LE+M +GC+P++ +Y TL+ G C D A + + ++++GF P L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEA-PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
I G C G++ EA + ++K+G P+ T+ ++ C M K+ E +N + ++
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC---RMGKMDEAMNLLERMA 248
Query: 442 IKGDT 446
G +
Sbjct: 249 ETGSS 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 1/205 (0%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D +Y L+QGLC+ ++ +A+ L M++KGF PD +YT ++++LC + +L EA K L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + P++V Y ++ G C+ GR +A +L M C+P V+Y +L+ GLC
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A ++ M+ G P LI GFC K D+A V E+L+ G P T+
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVK 439
++ +C +++ ++ ++K
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIK 213
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+ D V Y +++ G C+ R A L M S G P++ +Y ++ LC + A+
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+++ M ++ +P+ LI G C G+VDEA +L ++ K P T+ ++ +
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLISGL 125
Query: 422 CAGEEMEKLGEVLNEIV 438
C E + ++L E+V
Sbjct: 126 CKAERASEAYDLLEEMV 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ +N C + V+Y +L+ GLC + A ++ M+SKGF P A+I C +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ EA LEE+ P+ T+ +++ +C G +++ +L+++ K
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK 109
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I+ + N A++ C P +++ L + K
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G LPN+ +Y+ ++ C G + A E+G +P++ +Y +L+ + ++
Sbjct: 422 EEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRD 477
Query: 253 NRAVDLLEDMLNKGF 267
A +LL+DM+ +GF
Sbjct: 478 EDARELLDDMVQRGF 492
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ + YP + +T LI+ + A+K M + C P N +L +
Sbjct: 231 LQRDCYPDVIT-YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN-VLVNGICKEG 288
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A G PN ++NI++R+ C G A L M +G P V ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LCRK + RA+D+LE M G P++LSY LL+ C++KK+ A + L RM +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YNT++ C++G+ DA ++L + S GC P L++Y T++ GL G A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M +K P +L+ G GKVDEA E + G P+ T+ I+
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 421 ICAGEEMEK 429
+C + ++
Sbjct: 529 LCKSRQTDR 537
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 178/348 (51%), Gaps = 17/348 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
+LG+ + + I +IL E P + TY +I Y ++ + AL M +
Sbjct: 149 RLGKTRKAAKILEIL-----EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SV 200
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N IL L L+ A ++ + P+ +Y I++ A C + + A
Sbjct: 201 SPDVVTYNTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +RG PDV +Y +L+ G+C++ +++ A+ L DM + G P+ +++ +L S+
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---RAIDACKVLEDMPSNGCL 338
C + +A KLL M KG +P +V +N ++ CR+G RAID +LE MP +GC
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID---ILEKMPQHGCQ 376
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN +SY L+ G C + D A +Y++ M+S+G P + ++ C GKV++A +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
L +L G +P T+ ++ + + K ++L+E+ ++K DT
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 164/314 (52%), Gaps = 7/314 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY L+ + D A+K M C+P N IL + + ++ A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM-DAE 329
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G P+ ++NI++ C G + A + KM + G P+ SY L+ G
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++RA++ LE M+++G PD ++Y T+L +LC+ K+ +A ++L ++ KGC+P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ A K+L++M + P+ ++Y +LVGGL +G D A K+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC---- 422
G P+ ++++ G C + D A L ++ G P+E ++ +++ +
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 423 AGEEMEKLGEVLNE 436
A E +E L E+ N+
Sbjct: 570 AKEALELLNELCNK 583
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 143/289 (49%), Gaps = 32/289 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F ++ HG +P+ ++R FC G A + + G +PDV +Y +
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 242 LMQGLCRKSQVN--------------------------------RAVDLLEDMLNKGFVP 269
++ G C+ ++N +A+++L+ ML + P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++YT L+ + CR + A KLL M+ +GC PD+V YN +V G C+EGR +A K L
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
DMPS+GC PN++++ ++ +C G + A+K + M+ KGFSP + LI C
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G + A +LE++ + G P+ ++ ++ C ++M++ E L +V
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 5/298 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ V+P + TY +++ +S +A++ ML+ +C P ++E T R+
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE--ATCRDS 253
Query: 182 -LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A L G P+ +YN+++ C G + A N M G P+V ++
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I+++ +C + A LL DML KGF P +++ L+N LCRK L A +L +M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC P+ + YN ++ GFC+E + A + LE M S GC P++V+Y T++ LC G + A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + + SKG SP + +I G GK +A +L+E+ P T+ +V
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 141 AESNLPDRALKTFR-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
AE L D K F S++ FN IL + + L A D+ + +HG P
Sbjct: 328 AEKLLADMLRKGFSPSVVTFN----------ILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N+ SYN ++ FC + A +M RG PD+ +Y ++ LC+ +V AV++L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ +KG P ++Y T+++ L + K +A KLL M+ K PD + Y+++V G RE
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ +A K + G PN V++ +++ GLC D A ++ MI++G P+ +
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAG 406
LI+G G EA +L EL G
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKG 584
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ S + L + +S N +R G++ + M G +PD+ L++G CR
Sbjct: 91 YSSVNSSFALEDVESNN-HLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTL--------------------------------SYTT 276
+ +A +LE + G VPD + +Y T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNT 209
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L SLC KL++A ++L RM + C PD++ Y ++ CR+ A K+L++M G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P++V+Y LV G+C +G D A K++ M S G P+ + +++ C+ G+ +A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQIC 422
+L ++L+ G +P T+ +++ +C
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLC 355
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
Y+ N F + DVES L Q + R ++ LE+M+ G VPD + TTL+
Sbjct: 91 YSSVNSSF---ALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
CR K R+A K+L ++ G PD++ YN ++ G+C+ G +A VL+ M + P+
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PD 203
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+V+Y T++ LCD G A + + M+ + P LI+ C V A +L+
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
E+ G P T+ ++V IC +++ + LN++
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 38/247 (15%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M + C+P N +L + R A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR-AI 399
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G P+ +YN M+ A C +G + A + N++ +G P + +Y ++ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
+ + +A+ LL++M K PDT++Y++L+ L R+ K+ EA K
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 294 ---------LCR-------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
LC+ M +GC P+ Y ++ G EG A +A ++L +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 332 MPSNGCL 338
+ + G +
Sbjct: 580 LCNKGLM 586
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 34/334 (10%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY-----LRPAFDLFKSAH-------- 193
D AL +F ML N +P + R L + + Y L DLF H
Sbjct: 74 DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133
Query: 194 ---------------------KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
K G+ P+ ++N ++ C G+I A LFN+M RG
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV SY ++ GLC+ + A+ LL M KG P+ ++YTT+++SLC+ + +A
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
LL M +G PD+V Y+T++ GFC G +A + +M +PN V++ LV GLC
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+GM A+ + M KG P+ +AL+ G+C ++DEA VL+ ++ G AP
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ +++ C +++ +L E+ + E+ DT
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDT 407
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P+L Y +I + L + A+ M++ P + IL +
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCS-L 280
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+L A LF V+PNT ++ I++ C G +S A +F M ++G P+ +Y
Sbjct: 281 GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTY 340
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM G C +Q++ A +L+ M++KG P SY L+N C++++L EA LL M
Sbjct: 341 NALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSE 400
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K PD V Y+T++ G C+ GR +A + ++M S+G LP+L++Y TL+ GLC G D
Sbjct: 401 KELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDE 460
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ M P + + LI+G GK++ A + +L G P T+ +++
Sbjct: 461 ALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 128/241 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A LF + G P+ SY+ ++ C +G+ S+A L KM E+G P++ +Y
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ LC+ + VN A+DLL +M+++G PD ++Y+T+L+ C L EA L M +
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V + +V G C+EG +A V E M G PN +Y L+ G C D A+
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K + +M+ KG +P + LI G+C ++DEA +L E+ + P T+ ++ +
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Query: 422 C 422
C
Sbjct: 418 C 418
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 2/323 (0%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
H P S ++ +I +S AL+ R M E CKP I++ L +
Sbjct: 193 HQPDVIS-YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD-TLVND 250
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A DL G+ P+ +Y+ ++ FC G ++ A LFN+M R VMP+ ++ IL+
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ V+ A + E M KG P+ +Y L++ C ++ EA K+L M KGC P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ YN ++ G+C+ R +A +L +M P+ V+Y TL+ GLC G A
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M S G P L+ G C G +DEA +L+ + ++ P + +++ +
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490
Query: 425 EEMEKLGEVLNEIVKVEIKGDTR 447
++E E+ +++ I+ R
Sbjct: 491 GKLEVAKELFSKLFADGIQPTIR 513
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 137/269 (50%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F++ K G PN +YN +M +C N + A + + M ++G P V SY IL+ G C
Sbjct: 324 VFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYC 383
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ A LL +M K PDT++Y+TL+ LC+ + +EA L M G PD++
Sbjct: 384 KRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLM 443
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ G C+ G +A K+L+ M + P++V Y L+ G+ G +VAK+ +
Sbjct: 444 TYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL 503
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G P +IKG G DEA + ++ G P+ ++ +I+ ++
Sbjct: 504 FADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDS 563
Query: 428 EKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
+++E+V D+ + + LE
Sbjct: 564 STAIRLIDEMVGKRFSADSSTFQMLLDLE 592
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ +TY L+ Y +N D A K M++ C P+ N ++ R L A
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR-LDEAKS 393
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + P+T +Y+ +M+ C G A LF +M G++PD+ +Y L+ GLC
Sbjct: 394 LLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLC 453
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ A+ LL+ M PD + Y L+ + KL A +L ++ G P I
Sbjct: 454 KHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G +EG + +A ++ M +G LPN SY ++ G A + + M
Sbjct: 514 TYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Query: 368 ISKGFSPHFSVSHALI 383
+ K FS S L+
Sbjct: 574 VGKRFSADSSTFQMLL 589
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 15/272 (5%)
Query: 184 PAFDLFKSAH-------KHGVLPNTKSYNIMMRAFCFNGDISI--AYTLFNKMFERGVMP 234
P+F F H K LP F N ISI A F +M P
Sbjct: 37 PSFLFFNHHHITTSTCTKKRSLPQNNG------GFLSNNSISIDDALASFYRMLRMNPRP 90
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
V + + + +K Q + V L M G + S L+N LCR + A +L
Sbjct: 91 SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+M G PD + +NT++ G C EG +A + +M G P+++SY T++ GLC
Sbjct: 151 GKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKS 210
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G +A + ++ M KG P+ +I C V++A +L E++ G P T+
Sbjct: 211 GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTY 270
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
I+ C+ + + + NE+V + +T
Sbjct: 271 STILHGFCSLGHLNEATILFNEMVGRNVMPNT 302
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY L+ + D ALK +SM E +P N ++E + L A +
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI-AGKLEVAKE 498
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P ++Y IM++ G AY LF KM + G +P+ SY +++QG
Sbjct: 499 LFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFL 558
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
+ + A+ L+++M+ K F D+ ++ LL+
Sbjct: 559 QNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 134/231 (58%), Gaps = 3/231 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ SYN M+ +C G + A L M + PD +Y L++GLC + + + A+ +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+DML +G VPD ++YT LL + C++ ++A KLL M+ KGC PDIV YN VV G C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EGR DA + L+ +PS GC PN VSY ++ GLC ++ A+K M M KG P+
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ LI C G V+ A +L+++ K G P+ ++ I+ C ++M++
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 13/332 (3%)
Query: 97 TYLILILKL-GRAK---YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RAL 150
TY LI L GR + +++DD+L P + TY I + A +A+
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDML------RRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K M + C P N ++ + + A + KS +G PNT SYNI+++
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNG-ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A L +M +G P+V ++ +L+ LCR+ V A+++L+ + G P+
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+LSY +L++ C++KK+ A + M GC PDIV YNT++ CR G A ++L
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ GC P L+SY T++ GL G + A + + M++KG P + G C G
Sbjct: 387 QLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+++EA ++ G P+ + I+ +C
Sbjct: 447 RIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC 478
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 169/331 (51%), Gaps = 3/331 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY ++ + D A++ +S+ + C+P N +L+ L T + A
Sbjct: 219 APDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW-EDAE 277
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G PN ++N+++ C G + A + +++ + G P+ SY ++
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++RA+ +E M++ G PD +SY TLL +LCR ++ A +LL ++K KGC P +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L +M + G P++++Y T+ GLC +G + A K
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G P+ + +A++ G C A + ++ G P+E T+ +++ +
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGL 517
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
+++ E++ E+ + T + + I L D
Sbjct: 518 VKEAREMMAELCSRGVVSKTLVNKGAIRLLD 548
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 139/261 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + G +P+ +Y I++ A C A L ++M ++G PD+ +Y +++
Sbjct: 171 ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVN 230
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+C++ +V+ A++ L+ + + G P+T+SY +L LC ++ +A KL+ M KG P
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +N ++ CR G A ++L+ +P GC PN +SY ++ C Q D A ++
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+LM+S G P + L+ C G+VD A +L +L G P ++ ++ +
Sbjct: 351 ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+ E+ E+LNE+V ++ D
Sbjct: 411 GKTEEALELLNEMVTKGLQPD 431
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 135/239 (56%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T +YN ++R C G A + + M RG +PDV +Y IL++ C++S +AV L
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++M +KG PD ++Y ++N +C++ ++ +A + L + GC P+ V YN V+ G C
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R DA K++ +M G PN+V++ L+ LC +G+ + A + + + G +P+
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ FC K+D A +E ++ +G P ++ ++ +C G E++ E+L+++
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 140/296 (47%), Gaps = 4/296 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD + LKS Y P+ +Y ++K + + A K M P N
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L R + PA ++ K+G PN+ SYN ++ AFC + A M
Sbjct: 298 LISFLC-RRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ AV+LL + +KG P +SY T+++ L + K EA
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEA 416
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CREGR +A K + G PN V Y ++ G
Sbjct: 417 LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
LC + A M+S G P+ S LI+G G V EA ++ EL G
Sbjct: 477 LCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 3/327 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P+ P +TY LI+ D AL ML C P +LE Y +
Sbjct: 147 PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGY-KQ 205
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L G P+ +YN+++ C G + A + G P+ SY I+++
Sbjct: 206 AVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLK 265
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A L+ +M KG P+ +++ L++ LCR+ + A ++L ++ GC P
Sbjct: 266 GLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTP 325
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN ++ FC++ + A +E M S+GC P++VSY TL+ LC G D A + +
Sbjct: 326 NSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELL 385
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ KG +P + +I G GK +EA +L E++ G P T+ I +C
Sbjct: 386 HQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCRE 445
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+E+ + ++ + I+ +T + A
Sbjct: 446 GRIEEAIKAFCKVQDMGIRPNTVLYNA 472
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 59/293 (20%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL-- 242
A F S+H + LP K+ R N + V P+ +R
Sbjct: 14 ALPTFASSHPYPSLPTPKTAAPKPR--------------LNLAYAGAVAPNAVPHRSAAS 59
Query: 243 ---MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS-YTTLLNSLCRKKKLREAYKLLCRMK 298
++ L R+ + A+ L+E M G P L+ LC + EA ++L
Sbjct: 60 NDRLRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVL---- 113
Query: 299 VKGCNPDIVHYNTVVLGF--------------------------------CREGRAIDAC 326
C PD++ YN +V G+ C GR +A
Sbjct: 114 -ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNAL 172
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
VL+DM GC+P++V+Y L+ C + + A K + M KG +P + ++ G
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
C G+VD+A L+ L G P+ ++ +++ +C E E +++ E+ +
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSR 285
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 178/338 (52%), Gaps = 11/338 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L +A+ S D+L + + P +FTY LI + +S D AL+ F
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCF 213
++ +P + +++ L L+ A DLF K G +PNT +YN ++ FC
Sbjct: 175 QLVARGFRPDVVTYSCLIDGLCKE-GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A L +M E G PDV +Y LM G C+ ++++ A DLL M KG PD ++
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDM 332
+T+L++ LCR+ +L +A +L M+ K C+P + YNT++ G+CR + +A K +LE+M
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
C PN+VS+ ++ GLC A + ++ + +P + +I G C KV
Sbjct: 354 D---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 393 DEACGVLEELLKA-GEAPHEDTWVMIVPQICAGEEMEK 429
DEAC V ++L+ G P+ T+ ++ +C +++
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDR 448
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 5/270 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +Y ++ A C + A +M R + P+V +Y +L+ GLC+ +V+ A
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
V LL M K VP ++Y +L++ LC+ ++ EAY LL M GC PDI Y T++ G
Sbjct: 101 VALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS-P 374
FC+ ++ DA +V E + + G P++V+Y L+ GLC +G A MI G P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ ++LI GFC +GK+DEA +LE + + G +P T+ ++ C ++ ++L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 435 NEIVKVEIKGDTRIVEAGIGLEDYLIGKTR 464
N++ + KG T V L D L + R
Sbjct: 280 NQMTR---KGLTPDVVTFTSLMDGLCRENR 306
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 134/259 (51%), Gaps = 2/259 (0%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N L A + + PN +Y +++ C G + A L +KM ++ V P +Y
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTY 118
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC+ + + A DLLE+M+ G +PD +YTTL+ C+ KK +A ++ ++
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFD 358
+G PD+V Y+ ++ G C+EGR +A + M +G C+PN V+Y +L+ G C G D
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++ M G SP L+ GFC + ++D+A +L ++ + G P T+ ++
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Query: 419 PQICAGEEMEKLGEVLNEI 437
+C + +L E+
Sbjct: 299 DGLCRENRLSDAVHILGEM 317
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 5/303 (1%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY I+A N A K M N P +++ L + A
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKG-GRVDEAVA 102
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K V P +YN ++ C S AY L +M G +PD+ +Y L+ G C
Sbjct: 103 LLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDI 306
+ + + A+ + E ++ +GF PD ++Y+ L++ LC++ +L+EA L RM K C P+
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN+++ GFCR G+ +A +LE M G P++V+Y TL+ G C D A +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG +P +L+ G C ++ +A +L E+ + +P T+ I+ C +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 427 MEK 429
+E+
Sbjct: 342 LEE 344
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 163/346 (47%), Gaps = 9/346 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L + +D+ + L P+ TY LI ++ A
Sbjct: 83 TYTVLIDGLCKG---GRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ C P ++ + A +F+ G P+ +Y+ ++ C
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKS-DDALRVFEQLVARGFRPDVVTYSCLIDGLCKE 198
Query: 215 GDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A LF +M + G MP+ +Y L+ G CR +++ A++LLE M G PD ++
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YTTL+N C+ +L +AY LL +M KG PD+V + +++ G CRE R DA +L +M
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
C P + +Y T++ G C + A+K+M + P+ + +I+G C V +
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSS 376
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EA ++EE + P + ++ +C +++++ V ++++
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 133/245 (54%), Gaps = 5/245 (2%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y +++ C + A KM +G PDV +Y ++ LC +++++ A LE+M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
N+ P+ ++YT L++ LC+ ++ EA LL +M+ K C P V YN+++ G C+ RA
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERA 131
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +LE+M +GC+P++ +Y TL+ G C D A + + ++++GF P L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEA-PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
I G C G++ EA + ++K+G P+ T+ ++ C M K+ E +N + ++
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC---RMGKMDEAMNLLERMA 248
Query: 442 IKGDT 446
G +
Sbjct: 249 ETGSS 253
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 1/205 (0%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D +Y L+QGLC+ ++ +A+ L M++KGF PD +YT ++++LC + +L EA K L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + P++V Y ++ G C+ GR +A +L M C+P V+Y +L+ GLC
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A ++ M+ G P LI GFC K D+A V E+L+ G P T+
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVK 439
++ +C +++ ++ ++K
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIK 213
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+ D V Y +++ G C+ R A L M S G P++ +Y ++ LC + A+
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+++ M ++ +P+ LI G C G+VDEA +L ++ K P T+ ++ +
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLISGL 125
Query: 422 CAGEEMEKLGEVLNEIV 438
C E + ++L E+V
Sbjct: 126 CKAERASEAYDLLEEMV 142
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ +N C + V+Y +L+ GLC + A ++ M+SKGF P A+I C +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ EA LEE+ P+ T+ +++ +C G +++ +L+++ K
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK 109
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I+ + N A++ C P +++ L + K
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G LPN+ +Y+ ++ C G + A E+G +P++ +Y +L+ + ++
Sbjct: 422 EEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRD 477
Query: 253 NRAVDLLEDMLNKGF 267
A +LL+DM+ +GF
Sbjct: 478 EDARELLDDMVQRGF 492
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 177/347 (51%), Gaps = 17/347 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
++G+ K + + +IL E P + TY LI Y +S D AL+ M N
Sbjct: 161 RIGKTKKATWVMEIL-----EQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NV 212
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N IL L L+ A ++ + P+ +Y I++ A C + A
Sbjct: 213 APDVVTYNTILRTLC-DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +G PDV +Y +L+ G+C++ +++ A+ L +M + G P+ +++ +L S+
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---RAIDACKVLEDMPSNGCL 338
C + +A KLL M KGC+P +V +N ++ CR+G RAID +LE MP +GC
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID---ILEKMPMHGCT 388
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN +SY L+ G C + D A +Y+ +M+S+G P + L+ C GKVD A +
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 448
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L +L G +P T+ ++ + + E+ ++L+E+ + +K D
Sbjct: 449 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ E YP + +T LI+ + + +A+K M KP N ++ +
Sbjct: 243 LQKECYPDVIT-YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING-ICKEG 300
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A + +G PN ++NI++R+ C G A L + M +G P V ++
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LCR+ + RA+D+LE M G P++LSY LL+ C++KK+ A + L M +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YNT++ C++G+ A ++L + S GC P L++Y T++ GL G + A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M KG P +L+ G GKVDEA +L G P+ T+ I+
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Query: 421 ICAGEEMEK 429
+C + ++
Sbjct: 541 LCKSRQTDR 549
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 161/310 (51%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D A+K +M + C+P N IL + + ++ A
Sbjct: 284 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM-DAEK 342
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ ++NI++ C G + A + KM G P+ SY L+ G C
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 402
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++RA++ L+ M+++G PD ++Y TLL +LC+ K+ A ++L ++ KGC+P ++
Sbjct: 403 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 462
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ A K+L++M G P++++Y +LV GL +G D A K+ +
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ ++++ G C + D A L ++ P E T+ +++ I
Sbjct: 523 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 582
Query: 428 EKLGEVLNEI 437
++ ++LNE+
Sbjct: 583 KEALDLLNEL 592
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y P++ T+ +++ + A K ML C P N ++ L + L
Sbjct: 315 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC-RQGLLG 373
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D+ + HG PN+ SYN ++ FC + A + M RG PD+ +Y L+
Sbjct: 374 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 433
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV++L + +KG P ++Y T+++ L + K A KLL M+ KG
Sbjct: 434 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 493
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDI+ Y+++V G REG+ +A K D+ G PN ++Y +++ GLC D A +
Sbjct: 494 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 553
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ MISK P + LI+G G EA +L EL G
Sbjct: 554 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 32/289 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F +S G +P+ ++R FC G A + + + G +PDV +Y +
Sbjct: 130 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189
Query: 242 LMQGLCRKSQVNRAVDLLEDM--------------------------------LNKGFVP 269
L+ G C+ +++ A+ +L+ M L K P
Sbjct: 190 LISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++YT L+ + C++ + +A KLL M+ KG PD+V YN ++ G C+EGR +A K L
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 309
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+MPS GC PN++++ ++ +C G + A+K + M+ KG SP + LI C
Sbjct: 310 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 369
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G + A +LE++ G P+ ++ ++ C ++M++ E L+ +V
Sbjct: 370 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M C P N +L + R A
Sbjct: 353 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR-AI 411
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G P+ +YN ++ A C +G + +A + N++ +G P + +Y ++ GL
Sbjct: 412 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 471
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + RA+ LL++M KG PD ++Y++L++ L R+ K+ EA K ++ G P+
Sbjct: 472 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 531
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN+++LG C+ + A L M S C P +Y L+ G+ +G+ A +
Sbjct: 532 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591
Query: 367 MISKGFSPHFSVSHALIK 384
+ S+G S +K
Sbjct: 592 LCSRGLVKKSSAEQVAVK 609
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R NG++ + M RG +PD+ L++G CR + +A ++E + G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD ++Y L++ C+ ++ A ++L RM V PD+V YNT++ C G+ A +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 237
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL+ C P++++Y L+ C + A K + M +KG P + LI G C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G++DEA L + G P+ T +I+ +C+ ++L+++++
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLR 349
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L L R +L + +K L M +G PDI+ +++ GFCR G+ A V+E + +G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P++++Y L+ G C G D A +Q++ +P + +++ C+ GK+ +A
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 398 VLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNEIVKVEI 442
VL+ L+ P T+ +++ C G+ M+ L E+ N+ K ++
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDV 286
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 174/344 (50%), Gaps = 11/344 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
++G+ K + + +IL E P + TY LI Y +S D AL+ M N
Sbjct: 104 RIGKTKKATWVMEIL-----EQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NV 155
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N IL L L+ A ++ + P+ +Y I++ A C + A
Sbjct: 156 APDVVTYNTILRTLC-DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +G PDV +Y +L+ G+C++ +++ A+ L +M + G P+ +++ +L S+
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C + +A KLL M KGC+P +V +N ++ CR+G A +LE MP +GC PN
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+SY L+ G C + D A +Y+ +M+S+G P + L+ C GKVD A +L +
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L G +P T+ ++ + + E+ ++L+E+ + +K D
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ E YP + +T LI+ + + +A+K M KP N ++ +
Sbjct: 186 LQKECYPDVIT-YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING-ICKEG 243
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A + +G PN ++NI++R+ C G A L + M +G P V ++
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LCR+ + RA+D+LE M G P++LSY LL+ C++KK+ A + L M +
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YNT++ C++G+ A ++L + S GC P L++Y T++ GL G + A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M KG P +L+ G GKVDEA +L G P+ T+ I+
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 421 ICAGEEMEK 429
+C + ++
Sbjct: 484 LCKSRQTDR 492
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 161/310 (51%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D A+K +M + C+P N IL + + ++ A
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM-DAEK 285
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ ++NI++ C G + A + KM G P+ SY L+ G C
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++RA++ L+ M+++G PD ++Y TLL +LC+ K+ A ++L ++ KGC+P ++
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ A K+L++M G P++++Y +LV GL +G D A K+ +
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ ++++ G C + D A L ++ P E T+ +++ I
Sbjct: 466 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 525
Query: 428 EKLGEVLNEI 437
++ ++LNE+
Sbjct: 526 KEALDLLNEL 535
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y P++ T+ +++ + A K ML C P N ++ L + L
Sbjct: 258 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC-RQGLLG 316
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D+ + HG PN+ SYN ++ FC + A + M RG PD+ +Y L+
Sbjct: 317 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 376
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV++L + +KG P ++Y T+++ L + K A KLL M+ KG
Sbjct: 377 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDI+ Y+++V G REG+ +A K D+ G PN ++Y +++ GLC D A +
Sbjct: 437 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ MISK P + LI+G G EA +L EL G
Sbjct: 497 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 32/289 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F +S G +P+ ++R FC G A + + + G +PDV +Y +
Sbjct: 73 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132
Query: 242 LMQGLCRKSQVNRAVDLLEDM--------------------------------LNKGFVP 269
L+ G C+ +++ A+ +L+ M L K P
Sbjct: 133 LISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++YT L+ + C++ + +A KLL M+ KG PD+V YN ++ G C+EGR +A K L
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 252
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+MPS GC PN++++ ++ +C G + A+K + M+ KG SP + LI C
Sbjct: 253 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 312
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G + A +LE++ G P+ ++ ++ C ++M++ E L+ +V
Sbjct: 313 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M C P N +L + R A
Sbjct: 296 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR-AI 354
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G P+ +YN ++ A C +G + +A + N++ +G P + +Y ++ GL
Sbjct: 355 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 414
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + RA+ LL++M KG PD ++Y++L++ L R+ K+ EA K ++ G P+
Sbjct: 415 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 474
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN+++LG C+ + A L M S C P +Y L+ G+ +G+ A +
Sbjct: 475 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534
Query: 367 MISKGFSPHFSVSHALIK 384
+ S+G S +K
Sbjct: 535 LCSRGLVKKSSAEQVAVK 552
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R NG++ + M RG +PD+ L++G CR + +A ++E + G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD ++Y L++ C+ ++ A ++L RM V PD+V YNT++ C G+ A +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 180
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL+ C P++++Y L+ C + A K + M +KG P + LI G C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G++DEA L + G P+ T +I+ +C+ ++L+++++
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLR 292
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L L R +L + +K L M +G PDI+ +++ GFCR G+ A V+E + +G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P++++Y L+ G C G D A +Q++ +P + +++ C+ GK+ +A
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 398 VLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNEIVKVEI 442
VL+ L+ P T+ +++ C G+ M+ L E+ N+ K ++
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDV 229
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 174/339 (51%), Gaps = 7/339 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP V KL+ S+ +P A +FD A+R P + HS Y ++ +L + + + I+
Sbjct: 9 SPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVEL 68
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
++S+ + +IK Y ++++PD+AL F+ M E F C+P + N +L V +
Sbjct: 69 IRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 180 NYLR--PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+++ F F++A GV PN ++YN++++ C + A + M++ G PDV
Sbjct: 129 QWVKVESLFAYFETA---GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR- 296
SY ++ L + +++ A++L ++M +G PD Y L++ ++K + A +L R
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
++ P++ +N ++ G + GR D K+ E M N +L +Y +L+ GLCD G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
D A+ + + S + ++ GFC GK+ E+
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES 344
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 10/339 (2%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL-ITLKSEHYPVTP 130
+ D A E++D + + T+ I+I L + +DD L I + +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC---GRVDDCLKIWERMKQNEREK 288
Query: 131 SLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
L+TY LI ++ D+A F + E N +L ++ + +L
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF-CRCGKIKESLEL 347
Query: 189 FK-SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ HK+ V N SYNI+++ NG I A ++ M +G D +Y I + GLC
Sbjct: 348 WRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
VN+A+ +++++ + G D +Y ++++ LC+KK+L EA L+ M G +
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
N ++ G R+ R +A L +M NGC P +VSY L+ GLC G F A +++ M
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ G+ P L+ G C K+D A + + L++G
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 110/240 (45%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L K KHGV N+ N ++ + + A +M + G P V SY I
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + A +++ML G+ PD +Y+ LL LCR +K+ A +L + G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D++ +N ++ G C G+ DA V+ +M C NLV+Y TL+ G G + A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M G P + ++KG C V A ++ G P TW ++V +
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K+G P SYNI++ C G A +M E G PD+++Y IL+ GLCR +++
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++L L G D + + L++ LC KL +A ++ M+ + C ++V YNT++
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GF + G + A + M G P+++SY T++ GLC A ++ + G
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 374 PHFSVSHALIKGFCN 388
P + L++ N
Sbjct: 672 PTVYTWNILVRAVVN 686
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 172/404 (42%), Gaps = 46/404 (11%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKI 139
F+ A PN + TY +LI + K F L + E + P +F+Y +I
Sbjct: 140 FETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFK--PDVFSYSTVIND 193
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF-KSAHKHGVL 198
A++ D AL+ F M E P N +++ + +++ + A +L+ + V
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH-KTAMELWDRLLEDSSVY 252
Query: 199 PNTKSYNIMM-----------------------------------RAFCFNGDISIAYTL 223
PN K++NIM+ C G++ A ++
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
FN++ ER DV +Y ++ G CR ++ +++L M +K V + +SY L+ L
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLE 371
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
K+ EA + M KG D Y + G C G A V++++ S+G ++ +
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y +++ LC + + A ++ M G + V +ALI G ++ EA L E+
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
K G P ++ +++ +C + + + E+++ K D +
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y+ A + + G + +Y ++ C + A L +M + GV +
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GL R S++ A L +M G P +SY L+ LC+ K EA + M
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 301 GCNPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G PD+ Y+ ++ G CR+ R ID A ++ +G +++ + L+ GLC G D
Sbjct: 529 GWKPDLKTYSILLCGLCRD-RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A M M + + + + L++GF VG + A + + K G P ++ I+
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 420 QIC 422
+C
Sbjct: 648 GLC 650
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 164 LPKQLN--RILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIA 220
PK L+ +L+LL + +N R AF LF SA +H G + Y+ ++R
Sbjct: 4 FPKSLSPKHVLKLLKSEKN-PRAAFALFDSATRHPGYAHSAVVYHHILR----------- 51
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
++ E ++ V L++ K + A+ +++ K +PD +
Sbjct: 52 -----RLSETRMVNHVSRIVELIRSQECKCDEDVALSVIK-TYGKNSMPD--------QA 97
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L K++RE + GC P I YNT++ F + + + + G PN
Sbjct: 98 LDVFKRMREIF---------GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPN 148
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
L +Y L+ C + F+ A+ ++ M +GF P +I GK+D+A + +
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 401 ELLKAGEAP 409
E+ + G AP
Sbjct: 209 EMSERGVAP 217
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + + N +YN +M F GD + A ++ M++ G+ PD+ SY
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+M+GLC V+ A++ +D N G P ++ L+ ++ +
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G+ + Y +L L + + +++ ++ + C D +V+ + + A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 326 CKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
V + M GC P + SY TL+ + + + + G +P+ + LIK
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C + ++A G L+ + K G P ++ ++ + +++ E+ +E+
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 209/446 (46%), Gaps = 22/446 (4%)
Query: 27 PSLIFCYSSSSQ--ESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDY 84
P+L F S S+ +P E +S+ S + + Q L ++ A F +
Sbjct: 45 PTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLW 104
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV-TPSLFTYLIKIYAES 143
A R P F S+ +Y I++ LG + F+++ D LI ++ V T LF ++ Y+ +
Sbjct: 105 AKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRA 164
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT--HRNYLRPAFDLFKSAHKHGVLPNT 201
+LP A++ F M EF + L+++L L H + + FD KS P+
Sbjct: 165 DLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFN----PSV 220
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
K+Y+I+ R + GD + A +F++M ERG + DV +Y L++ LC+ + + A + +
Sbjct: 221 KTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLE 280
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + G PD +Y+ + S C++ L Y++L R K K P++ YN V+ C++
Sbjct: 281 MDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQN 340
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++L++M G P+ SY + CD + A ++ M P +
Sbjct: 341 VEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNM 400
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG----EEMEKLGEVLNE- 436
++K VG+ D A V E + K G P T+ +++ C EE K E++ +
Sbjct: 401 VLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDE 460
Query: 437 -----IVKVEIKGDTRIVEAGIGLED 457
I VE+ D + GIG +D
Sbjct: 461 GIPPYIATVELLRDRLL---GIGFKD 483
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PS+ TY L + + + A K F M E C N +LE L A+
Sbjct: 217 NPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKG-GKRDEAY 275
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F +GV P+ +Y+I +R+ C D+ Y + + + ++P+V +Y +++ L
Sbjct: 276 KMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKL 335
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ V A +L++M+ +G PDT SY + C ++ A L+ RM C PD
Sbjct: 336 CKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDK 395
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ R GR A +V E M G P++ +Y ++ G C + + A KY +
Sbjct: 396 HTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFE 455
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+MI +G P+ + L +G D+
Sbjct: 456 MMIDEGIPPYIATVELLRDRLLGIGFKDQ 484
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 35/406 (8%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
V K + +S LA F + F+H+ T+ ++I KL + +L +K +
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ + LF +I +Y + L +RA++ F + EF C P K N +L+ L+ N ++
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE-NRIQM 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD--------- 235
+ +++ + G PN +YN++++A C N + A L +M +G PD
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 236 ---------------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
V Y L+ GLC++ A +L+ +M+ KG P+ +SY
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+TL+N LC ++ A+ L +M +GC+P+I +++V G G DA + M
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 335 N-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+V+Y TLV G C G A M G SP+ +LI GF G +D
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAG---EEMEKLGEVLNE 436
A + ++L +G P+ + +V +C +E E L E++++
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 5/312 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ +Y LI + S + A ML+ C P L+ +++ R A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL-RGTTFDA 335
Query: 186 FDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
DL+ + G+ PN +YN +++ FC +G+I A ++F+ M E G P++ +Y L+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G ++ ++ AV + ML G P+ + YT ++ +LCR K +EA L+ M + C P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+ +N + G C GR A KV M + C PN+V+Y L+ GL + A
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ + +G S + L+ G CN G A ++ +++ G++P E T MI+ C
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 424 GEEMEKLGEVLN 435
+ E+ ++L+
Sbjct: 576 QGKAERAAQMLD 587
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 14/305 (4%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN N+ L G + +++ + + E +P++ TY LI +A+
Sbjct: 349 QPNVVAYNT------LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ + ML C P ++E L H + + A L + K P+ ++N
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF-KEAESLIEIMSKENCAPSVPTFN 461
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ C G + A +F +M ++ P++ +Y L+ GL + +++ A L ++
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G + +Y TLL+ C A +L+ +M V G +PD + N ++L +C++G+A
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 325 ACKVLEDMPSNG---CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A ++L D+ S G P+++SY ++ GLC + ++ MIS G P +
Sbjct: 582 AAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 382 LIKGF 386
LI F
Sbjct: 641 LINCF 645
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 40/309 (12%)
Query: 149 ALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL + M+ F +P N +++ +H N ++ A +F + G PN ++Y +
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK-AVSVFSHMEEIGCSPNIRTYGSL 393
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM----- 262
+ F G + A ++NKM G P+V Y +++ LCR S+ A L+E M
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 263 ---------LNKGFV----------------------PDTLSYTTLLNSLCRKKKLREAY 291
KG P+ ++Y LL+ L + ++ EAY
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L + ++G YNT++ G C G A +++ M +G P+ ++ ++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 352 CDQGMFDVAKKYMQLMIS--KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C QG + A + + L+ + + P +I G C ++ +LE ++ AG P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 410 HEDTWVMIV 418
TW +++
Sbjct: 634 SIATWSVLI 642
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 121/256 (47%), Gaps = 6/256 (2%)
Query: 185 AFDLFKSAHKHGVLPNTK-SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A FKS + +T ++ +M+R +G + L +M +G + + ++
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ RAV++ + G P Y +L++L + +++ Y + MK G
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ YN ++ C+ + A K+L +M + GC P+ VSY T++ +C+ G+ ++
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE- 237
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+++ F P SV +ALI G C A ++ E+++ G +P+ ++ ++ +C
Sbjct: 238 ----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 424 GEEMEKLGEVLNEIVK 439
++E L +++K
Sbjct: 294 SGQIELAFSFLTQMLK 309
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 195/415 (46%), Gaps = 24/415 (5%)
Query: 50 SSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK 109
S ++ +PI + RV L+ D LA F++A + F+H++ Y IL+ L A+
Sbjct: 90 SLFDSALAPIWAS-RV--LVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCAR 146
Query: 110 YFSLID----------------DILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALK 151
++S + D+ L + P +F L E + + A +
Sbjct: 147 FYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASE 206
Query: 152 TFRSMLEFNCKPLPKQLNRILELLV-THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M +F P P+ N +L L R L F FK G+ + +YNIM+
Sbjct: 207 CFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF--FKDMGAAGIKRSVFTYNIMIDY 264
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C GD+ +A +LF +M E G PD+ +Y L+ G + ++ + + E M + PD
Sbjct: 265 LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 324
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y L+N C+ +++ +A++ L MK G P++V Y+T + FC+EG +A K
Sbjct: 325 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 384
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
DM PN +Y +L+ C G A K ++ ++ G + AL+ G C G
Sbjct: 385 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 444
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ EA V +L AG AP+++T+ +V +EME ++L E+ + IK D
Sbjct: 445 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY I + + + A+K F M P +++ N L A
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN-LAEA 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + G+ N +Y ++ C G + A +F M GV P+ E+Y L+ G
Sbjct: 415 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 474
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ ++ A D+L++M K PD L Y T+L LC + +L EA L+ +K G N +
Sbjct: 475 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 534
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y T++ + + G+A +A +LE+M G + V+Y L+ GLC G+ A +
Sbjct: 535 AVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFG 594
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M G P+ +V AL+ G C + A + +E+L G P + + ++
Sbjct: 595 RMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 38/350 (10%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+TP+ FTY LI ++ ALK +L+ K +L+ L ++
Sbjct: 390 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL-CEEGRMKE 448
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++F++ GV PN ++Y ++ F ++ A + +M E+ + PD+ Y ++
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 508
Query: 245 GLCRKS-----------------------------------QVNRAVDLLEDMLNKGFVP 269
GLC +S Q A+ LLE+ML+ G +
Sbjct: 509 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIA 568
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
++Y L++ LC+ ++EA RM G P++ Y +V G C+ A K+
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
++M G +P+ ++Y L+ G G A MI G ALI G +
Sbjct: 629 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 688
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G+V +A +L+E++ G P E ++ ++ + A ++++ E+ NE+ K
Sbjct: 689 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 738
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 1/274 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T L+ + ++ + A + M E KP IL L + + L A L
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL-CNESRLEEAKLLIGEI 526
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ N Y +M A+ +G + A TL +M + G++ +Y L+ GLC+ V
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ M G P+ YT L++ LC+ A KL M KG PD + Y +
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G + G +A + + M G +L +Y L+ GL G A+ + MI KG
Sbjct: 647 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGV 706
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
P V LIK + +GKVDEA + E+ K G
Sbjct: 707 LPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T L+ Y +S AL ML+ +++ L ++ A F
Sbjct: 537 IYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK-SGLVQEAMHHFGR 595
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ PN Y ++ C N +A LF++M ++G+MPD +Y L+ G +
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A++L + M+ G D +YT L+ L ++++A LL M KG PD V Y
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
++ + G+ +A ++ +M G + L +
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 193/379 (50%), Gaps = 7/379 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D + E+F +A Q + H Y +LI KLG A F ID +L+
Sbjct: 77 TPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQ 136
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E SLF ++K Y + LP +A + M ++C+P + N +L++L+
Sbjct: 137 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG- 195
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + ++F G+ P ++ ++M+A C ++ A L M G +P+ Y
Sbjct: 196 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 255
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L+ L + +VN + LLE+ML G +PD ++ ++ LC+ ++ EA KL+ RM +
Sbjct: 256 QTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLL 315
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P+ Y ++ G CR G+ +A +L +P+ PN+V + TL+ G +G D
Sbjct: 316 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDE 371
Query: 360 AKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
AK M + M+S G P + LI G C G + A ++ E+ G P+ T+ +++
Sbjct: 372 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 431
Query: 419 PQICAGEEMEKLGEVLNEI 437
+ C +E+ VL+E+
Sbjct: 432 DRFCKEGRLEEARNVLDEM 450
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 1/294 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI + + ++L + + + + LI + AL F M
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
CKP N ++ + N A L++ GV+ NT +YN ++ AF G
Sbjct: 486 SSKGCKPDIFTFNSLI-FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L N M RG D +Y L++ LCR + + + L EDM++KG P+ +S
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N LCR ++ A + L M +G PDIV YN+++ G C+ GRA +A + + + G
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
P+ ++Y TL+ C +GMFD A + + GF P+ + L+ F G
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 124/241 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++ G+ N YN ++ A C + + A +F M +G PD+ ++
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A+ L +DML +G + +T++Y TL+++ R+ ++EA KL+ M +G
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ CR G + EDM S G PN +S L+ GLC G A
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++++ MI +G +P ++LI G C G+ EA + ++L G P T+ ++
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 679
Query: 422 C 422
C
Sbjct: 680 C 680
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 147/314 (46%), Gaps = 5/314 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFR-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
LF LI Y D A SML C P N ++ L + + YL A +L
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI-LGLCKKGYLVSARELMN 413
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G PN +Y I++ FC G + A + ++M +G+ + Y L+ LC+
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+V A+++ DM +KG PD ++ +L+ LC+ K EA L M ++G + + YN
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T++ F R G +A K++ DM GC + ++Y L+ LC G + + M+SK
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G +P+ + LI G C G + A L +++ G P T+ ++ +C +
Sbjct: 594 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ-- 651
Query: 431 GEVLNEIVKVEIKG 444
E LN K++++G
Sbjct: 652 -EALNLFDKLQVEG 664
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 152/312 (48%), Gaps = 6/312 (1%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPAF 186
TP+ FTY + ++ R K + + N P P + N ++ V+
Sbjct: 319 TPNSFTYGVLMHGLC----RMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKA 374
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ +S G P+ +YN ++ C G + A L N+M +G P+V +Y IL+
Sbjct: 375 VMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 434
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++ A ++L++M KG + + Y L+++LC+ +K+++A + M KGC PDI
Sbjct: 435 CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 494
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+N+++ G C+ + +A + +DM G + N ++Y TL+ +G A K +
Sbjct: 495 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 554
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ +G + LIK C G +++ + E+++ G P+ + +++ +C
Sbjct: 555 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 614
Query: 427 MEKLGEVLNEIV 438
++ E L +++
Sbjct: 615 IQHALEFLRDMI 626
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 175/362 (48%), Gaps = 10/362 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V ++ +Q D LAK F +A +Q + H+ TY ++I +L A+ + IL
Sbjct: 148 NPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTA 207
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ E + ++ L T L++ + +N AL+ F M F C P N +LELLV
Sbjct: 208 MWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKG-G 266
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A +F + + P+ +++ I + +F +G + A +M + G+ P V ++
Sbjct: 267 FYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFT 326
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+L+ L + ++ A M N P+ ++YTTL+N L + +L EA ++ MK
Sbjct: 327 VLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKEN 386
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C+PD + YNT++ G + G A AC + ++M G +PNL +Y ++ L G A
Sbjct: 387 NCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEA 446
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL-KAGE--------APHE 411
+ + +G P + LI G++D+ +++E++ K GE A HE
Sbjct: 447 WQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHE 506
Query: 412 DT 413
T
Sbjct: 507 GT 508
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P F Y I + +SN D A K SM N P +L+ L L A
Sbjct: 699 LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL-GKSGRLEEA 757
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F++F + G P+ +Y +M G +S A +F M ++ +PDV +Y L+
Sbjct: 758 FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDS 817
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L ++ +V A E+ ++KG P+ Y++L++S +K + A +L M+ + C P+
Sbjct: 818 LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G + GR A K+LE+M GC+P+LV+Y L+ G+ GM D A+ Y +
Sbjct: 878 IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M KG P +LI+ V K+ EAC + + + + G P T+ +++ +
Sbjct: 938 RMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAG 997
Query: 426 EMEKLGEVLNEI 437
++ + + +E+
Sbjct: 998 KVHEAAMIFHEM 1009
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 173/348 (49%), Gaps = 17/348 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
TY L+ LG+A +D+ + L+ E PS+ TY L+ + + + + +L F
Sbjct: 565 TYTTLVDGLGKA---GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M+ C + ++ L + + A D+F + G+ P +Y ++ +
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDD-VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ I A +FN++ E ++PD Y I++ GL + ++V+ A L++ M N+ +PD +
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT+LL+ L + +L EA+ + +M +G PD+V Y +++ + G+ A + M
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
C+P++V+Y +L+ L +G + A + + ISKG +P+ V +LI F G VD
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC-AG---------EEMEKLG 431
A + EE+ + P+ T+ ++ + AG EEMEK+G
Sbjct: 861 RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 1/291 (0%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
S ++ +I +S+ D+AL F M E +PL +L LV + A +F
Sbjct: 634 STYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK-IDFALQIFN 692
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ ++P+T YNIM+ + + A L + M + ++PD+ +Y L+ GL +
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ A ++ M +G PD ++YT+L++ L + KL A + M K C PD+V Y+
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYS 812
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ +EGR +A E+ S GC PN+ Y +L+ +GM D A + + M +
Sbjct: 813 SLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRR 872
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
P+ + L+ G G+++ A +LEE+ K G P T+ +++ +
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 158/351 (45%), Gaps = 34/351 (9%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY L+ A++ + A + F M E NC P N +++ L A
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL-GKAGEADMAC 412
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LFK G++PN ++YNIM+ G A+ LF+ + E+G +PDV +Y L+ L
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472
Query: 247 CRKSQVNRAVDLLEDMLNKG----FVPDT---------------------------LSYT 275
+ Q+++ + ++++M+ KG D+ ++Y
Sbjct: 473 GKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYN 532
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL+++ + EA KLL MK C P +V Y T+V G + GR +A +L +M
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC P++V+Y +L+ + + + M+ KG S +I C VD+A
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
V + + G P + ++ + E+++ ++ NE+ + + DT
Sbjct: 653 LDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 3/284 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY L+ +S + A F M E +P ++++L L A
Sbjct: 734 ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL-GKGGKLSHA 792
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ K +P+ +Y+ ++ + G + AY F +G P+V Y L+
Sbjct: 793 LIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDS 852
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+K V+RA++L E+M + P+ ++Y LL+ L + +L A KLL M+ GC PD
Sbjct: 853 FGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPD 912
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G + G +A + M G +P+++++ +L+ L A +
Sbjct: 913 LVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFD 972
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M +G++P + LI GKV EA + E+ G P
Sbjct: 973 SMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 161/380 (42%), Gaps = 30/380 (7%)
Query: 89 PNFRHSNSTYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAE 142
PN R TY I+I LG+A + + L D+ + P +FTY LI + +
Sbjct: 425 PNLR----TYNIMISVLGKAGRQPEAWQLFHDL------KEQGAVPDVFTYNTLIDVLGK 474
Query: 143 SNLPDRALKTFRSMLEFNCK-PLPKQLNRILELLV--THRNYLRPAFDLFKSAHKHGVLP 199
D+ L + M+E + + + N E + R P+ FKS +
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLG-FKSLGE----- 528
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+YN +M AF NG + A L M + +P V +Y L+ GL + +++ AV LL
Sbjct: 529 --ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+M +G P ++Y++L+ S ++ + E+ L M KGC D+ Y+ V+ C+
Sbjct: 587 REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
A V M G P L +Y+TL+ L D A + + P V
Sbjct: 647 DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY 706
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++ G +VDEAC +++ + P T+ ++ + +E E N K
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLE---EAFNMFTK 763
Query: 440 VEIKGDTRIVEAGIGLEDYL 459
+ +G V A L D L
Sbjct: 764 MTEEGHEPDVVAYTSLMDVL 783
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY LI + + A F + + C P + +++ + + A
Sbjct: 805 VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF-GKKGMVDRAL 863
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF+ + PN +YN ++ G +++A L +M + G +PD+ +Y IL+ G+
Sbjct: 864 ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ V+ A + M KG VPD +++T+L+ SL + KL EA +L M+ +G NP +
Sbjct: 924 GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSV 983
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
V YN ++ R G+ +A + +M GC+P+ ++
Sbjct: 984 VTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A E+F+ R+ PN TY L+ L +A ++ + +L + E P L T
Sbjct: 862 ALELFEEMQRRQCPPNI----VTYNNLLSGLAKAGRLNVAEKLLEEM--EKVGCVPDLVT 915
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y LI + + D A F+ M E P ++E L + L A +LF S
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL-GKVDKLLEACELFDSM 974
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G P+ +YN+++ G + A +F++M +G MPD + I+ + L + Q
Sbjct: 975 EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQ 1034
Query: 253 NRAVD 257
A++
Sbjct: 1035 FHALE 1039
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 184/359 (51%), Gaps = 13/359 (3%)
Query: 29 LIFCYSSSSQESPSSPEQQQESSISNSKSPIG----------SPCRVQKLIASQSDPLLA 78
L+ Y S S+ + P Q+S+ ++ P SP V K+ +P
Sbjct: 9 LLRIYRSVSRSALIHPTLIQKSTFFSTFPPDDLKRLDHKDWLSPREVLKIFDGLRNPESV 68
Query: 79 KEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-LI 137
+ D S++ +F+ + + Y ++I KL +A+ F I+D++ TLK + +F Y +I
Sbjct: 69 MPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVI 128
Query: 138 KIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
K+Y + PDRA++T M +F+C P K N +L +LV+ + + ++ A + G
Sbjct: 129 KVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRF-DVVHKVYAGAPELG 187
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V + NI+++ C +G++ A L ++ ++ P+V ++ LM GLC +V A+
Sbjct: 188 VEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGAL 247
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LLE M +G PDT+ + L++ L ++ ++ E +LL RMK+KGC P+ Y V+ G
Sbjct: 248 GLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGV 307
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
GR A + + M G P+ VSY+ ++ GLC + + ++ M+ +GF P
Sbjct: 308 LDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVADVVWILKQMVEQGFVPE 366
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVVLGFCREGRA 322
K F P+ YT ++N L + + ++ +K+ K C D+ YN + + G+
Sbjct: 79 KDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGQP 138
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A + L DMP C P++ ++ ++ L FDV K G + L
Sbjct: 139 DRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNIL 198
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+KG C G VD AC +L+E K P+ T+ ++ +C +E +L + + +
Sbjct: 199 VKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGV 258
Query: 443 KGDTRIVEAGIGLEDYLIGKTRSRPR 468
DT + + LI R R R
Sbjct: 259 YPDTVVF-------NILISGLRKRGR 277
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ L+ ES + AL M P N ++ L R + +L
Sbjct: 230 FSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL-RKRGRVEEGMELLGRM 288
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN SY ++ G A +M + GV P SY++++ GLC+++ V
Sbjct: 289 KLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLV 348
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
V +L+ M+ +GFVP+ + +L ++
Sbjct: 349 ADVVWILKQMVEQGFVPERWMWRRILQTM 377
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 209/446 (46%), Gaps = 22/446 (4%)
Query: 27 PSLIFCYSSSSQ--ESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDY 84
P+L F S S+ +P E +S+ S + + Q L ++ A F +
Sbjct: 45 PTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLW 104
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV-TPSLFTYLIKIYAES 143
A R P F S+ +Y I++ LG + F+++ D LI ++ V T LF ++ Y+ +
Sbjct: 105 AKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRA 164
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT--HRNYLRPAFDLFKSAHKHGVLPNT 201
+LP A++ F M EF + L+++L L H + + FD KS P+
Sbjct: 165 DLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFN----PSV 220
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
K+Y+I+ R + GD + A +F++M ERG + DV +Y L++ LC+ + + A + +
Sbjct: 221 KTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLE 280
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + G PD +Y+ + S C++ L Y++L R K K P++ YN V+ C++
Sbjct: 281 MDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQN 340
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++L++M G P+ SY + CD + A ++ M P +
Sbjct: 341 VEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNM 400
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG----EEMEKLGEVLNE- 436
++K VG+ D A V E + K G P T+ +++ C EE K E++ +
Sbjct: 401 VLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDE 460
Query: 437 -----IVKVEIKGDTRIVEAGIGLED 457
I VE+ D + GIG +D
Sbjct: 461 GIPPYIATVELLRDRLL---GIGFKD 483
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PS+ TY L + + + A K F M E C N +LE L A+
Sbjct: 217 NPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKG-GKRDEAY 275
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F +GV P+ +Y+I +R+ C D+ Y + + + ++P+V +Y +++ L
Sbjct: 276 KMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKL 335
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ V A +L++M+ +G PDT SY + C ++ A L+ RM C PD
Sbjct: 336 CKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDK 395
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ R GR A +V E M G P++ +Y ++ G C + + A KY +
Sbjct: 396 HTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFE 455
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+MI +G P+ + L +G D+
Sbjct: 456 MMIDEGIPPYIATVELLRDRLLGIGFKDQ 484
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 148/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L +ML+ G VP+ +++TTL++ C+ +L A + +M +G
Sbjct: 212 LINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD+V YNT++ G C++G A +L++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 FSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI + V ALI G C G+ +A +L E+L+ G P ++T+ MI+ +
Sbjct: 332 ELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C +++K E+L E+
Sbjct: 392 CKKGDVKKASELLREM 407
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ +FR T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 92 TKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMRASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF +M + G++P+ ++ L+ G C+ +++ A+D+ MLN+
Sbjct: 211 VLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
GF PD ++Y TL+ LC+K L++A LL M KG PD + Y T++ G C+EG A
Sbjct: 271 GFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ E M + V Y L+ GLC +G A+K ++ M+ G P ++
Sbjct: 331 FELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +A +L E+ + G P
Sbjct: 391 FCKKGDVKKASELLREMQRNGRVP 414
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 16/339 (4%)
Query: 125 HYPVTPSLF---TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---H 178
H+ T +F LI+ D A F ++LE K + + L+T
Sbjct: 21 HFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILE--TKGTQRSDIYVFSGLITAYLE 78
Query: 179 RNYLRPAFDLFKSAHKHGV-LPNTKSYNIM---MRAFCFNGDISIAYTLFNKMFERGVMP 234
++R A + F+ KH +P N++ M+ F + + + ++ E G
Sbjct: 79 SGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFK----LVWGFYKEILECGYPA 134
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ + ILM C++ ++ A + + + G P +S+ TL+N + L E ++L
Sbjct: 135 SLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ G PD+ Y+ ++ G C+E R +A + +M NG +PN V++ TL+ G C
Sbjct: 195 NAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D+A + M+++GFSP + LI G C G + +A +L+E+ + G P + T+
Sbjct: 255 GRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITY 314
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++ C ++E E+ ++K I+ D + A I
Sbjct: 315 TTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALI 353
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D A F ML+ P +++ + L A
Sbjct: 202 VQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKN-GRLDLA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+++ G P+ +YN ++ C GD+ A L ++M +G+ PD +Y L+ G
Sbjct: 261 MDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A +L E M+ + D + YT L+ LC++ + +A K+L M G PD
Sbjct: 321 SCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPD 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y ++ FC++G A ++L +M NG +P +V+
Sbjct: 381 DETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 217/460 (47%), Gaps = 52/460 (11%)
Query: 34 SSSSQESPSSPEQQQESSISNSK---SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN 90
+S+S S ++ + ++ +NS SP +P ++ + + D +F +AS+QPN
Sbjct: 25 TSNSTLSFATTNHEPLTTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPN 84
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
F+ S+S + ++ KLG+A F + DIL +K + I+ YA L + L
Sbjct: 85 FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEIL 144
Query: 151 KTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH----GVLPNTKSYN 205
+ +M +EF N +L +LV N L+ L + AH + G+ P+ ++N
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDG-NKLK----LVEIAHSNMVSRGIRPDVSTFN 199
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ--------------------- 244
I+++A C I A L +M + G++PD +++ +MQ
Sbjct: 200 ILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEA 259
Query: 245 --------------GLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G C++ ++ A+ +E+M L +GF PD ++ L+N L + ++
Sbjct: 260 GCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKH 319
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A +++ M +G +PDI YN+++ G C+ G +A KVL M C PN V+Y T++
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIS 379
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC + + A K ++ KG P ++LI+G C A + +E+ G P
Sbjct: 380 TLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHP 439
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
E T+ M++ +C KL E LN + ++E+ G R V
Sbjct: 440 DEFTYNMLIDSLCF---RGKLQEALNLLKEMEVSGCARNV 476
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 127/239 (53%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ C + A L + +G++PDV +Y L+QGLC A++L
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMEL 428
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
++M KG PD +Y L++SLC + KL+EA LL M+V GC +++ YNT++ GFC+
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCK 488
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R +A ++ + M G N V+Y TL+ GLC + A + M MI +G P
Sbjct: 489 NKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFT 548
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++L+ FC G + +A +++ + G P T+ ++ +C +E ++L I
Sbjct: 549 YNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTI 607
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 160/333 (48%), Gaps = 40/333 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI---------------L 172
P ++TY LI + D A+K M+E +C P N I L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 173 ELLVTHRNYL-------------------RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
L++T + L A +L+K G P+ +YN+++ + CF
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A L +M G +V +Y L+ G C+ ++ A ++ + M +G ++++
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL++ LC+ +++ EA +L+ +M ++G PD YN+++ FC+ G A +++ M
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG--FSPHFSVSHALIKGFCNVGK 391
S+GC P++V+Y TL+ GLC G + A K ++ + KG +PH + +I+ +
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPH--AYNPVIQALFRRKR 631
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
EA + E+++ EAP T+ ++ +C G
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQG 664
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 39/376 (10%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ ILI L RA + IL+ + E + + P FT +++ + E D A++
Sbjct: 196 STFNILIKALCRAH--QIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVK 253
Query: 154 RSMLEFNCKPLPKQL----------NRILELL-------------------------VTH 178
M+E C + RI E L ++
Sbjct: 254 EQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSK 313
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+++ A ++ + G P+ +YN ++ C G++ A + N+M ER P+ +
Sbjct: 314 TGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVT 373
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ LC+++QV A L + KG +PD +Y +L+ LC + A +L MK
Sbjct: 374 YNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK 433
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KGC+PD YN ++ C G+ +A +L++M +GC N+++Y TL+ G C
Sbjct: 434 TKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ M +G S + + LI G C +V+EA ++++++ G P + T+ ++
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553
Query: 419 PQICAGEEMEKLGEVL 434
C +++K +++
Sbjct: 554 TYFCKAGDIKKAADIV 569
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 39/303 (12%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY LI+ S A++ ++ M C P N +++ L R L+ A
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLC-FRGKLQEA 460
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L K G N +YN ++ FC N I+ A +F++M +GV + +Y L+ G
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V A L++ M+ +G PD +Y +LL C+ +++A ++ M GC PD
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGC---------------------------- 337
IV Y T++ G C+ GR A K+L + G
Sbjct: 581 IVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFR 640
Query: 338 -------LPNLVSYRTLVGGLCDQGM-FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
P+ V+Y+ + GLC G A ++ M+ +G+ P FS + L +G ++
Sbjct: 641 EMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSL 700
Query: 390 GKV 392
V
Sbjct: 701 AMV 703
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 20/271 (7%)
Query: 31 FCYSSSSQESPSSPEQQQESSISNS----KSPIGSPCRVQKLIASQSDPLLAKEIFDYAS 86
FC + E+ +Q + +S + + I C+ +++ ++ L+ + I +
Sbjct: 486 FCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERV--EEASQLMDQMIME--- 540
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESN 144
R TY L+ +A DI+ T+ S+ P + TY LI ++
Sbjct: 541 ---GLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASD--GCEPDIVTYGTLIAGLCKAG 595
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ A K R++ P N +++ L R + A LF+ + P+ +Y
Sbjct: 596 RVEAATKLLRTIQMKGINLTPHAYNPVIQALF-RRKRSKEAVRLFREMIEKAEAPDAVTY 654
Query: 205 NIMMRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
I+ R C G I A +M ERG +P+ S+ +L +GL + V + L++ ++
Sbjct: 655 KIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVM 714
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
K D + T++ + K ++A L
Sbjct: 715 EKAKFSD--NEVTMIRGFLKISKYQDALATL 743
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 144/253 (56%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ GV P+T ++N +M C G A++L M ER P +Y L+
Sbjct: 29 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLIS 88
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ V+RA L+++ ++ GFVPD ++Y+ L + LC++ ++ EA++L+ M GC P
Sbjct: 89 GLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTP 148
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YNT++ G C+ + A ++LE + S+G +P++V+Y +V GLC +G D A K +
Sbjct: 149 NLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 208
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ +G +P AL++G C G+VDEA + +E++ +V +V C
Sbjct: 209 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 268
Query: 425 EEMEKLGEVLNEI 437
++ +V++ I
Sbjct: 269 SRTKEAQKVVDGI 281
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 8/360 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ N R S TY LI L + + ++ S + P + TY L +
Sbjct: 73 ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGF--VPDVVTYSILADGLCKRGR 130
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A + + M C P N +++ L + A++L ++ G +P+ +Y
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLC-KASKTEKAYELLETLVSSGFVPDVVTYT 189
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ C G + A + M +RG P V +Y LM+GLCR +V+ A + ++M++K
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 249
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
D L+Y +L+N C+ + +EA K++ ++G P I YN ++ G+C+EGR +
Sbjct: 250 DCTADALAYVSLVNGYCKSSRTKEAQKVV--DGIRG-TPYIDVYNALMDGYCKEGRLDEI 306
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
V EDM GC+PN+ +Y ++ GLC G D A +++ M S G P + +I G
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
K EA VL+++++AG P T+ ++ Q C E + +L ++K + D
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 134/253 (52%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++ V P+ +YNI++ C A + ++M +RGV PD ++ +M GLC+ +
Sbjct: 2 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 61
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
RA LL M + P +Y TL++ LC+++ + A L+ G PD+V Y+ +
Sbjct: 62 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
G C+ GR +A +++++M NGC PNLV+Y TL+ GLC + A + ++ ++S GF
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P ++ G C G++D+A ++E +LK G P T+ ++ +C +++
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241
Query: 433 VLNEIVKVEIKGD 445
+ E+V + D
Sbjct: 242 IFKEMVSKDCTAD 254
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 133/256 (51%), Gaps = 4/256 (1%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F+ G +PN K+YNI+M C +G + A+ M G +PDV SY I++ GL
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ S+ A +L+ M+ G PD ++Y TL+ C++++ +A +L M G +PD
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 427
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN-LVSYRTLVGGLCDQGMFDVAKKYMQ 365
V YNT++ G + R DA +++ +M NGC+ + +Y T++ LC +G A M
Sbjct: 428 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G + + I C G++DEA +L E+ E ++ ++ +C E
Sbjct: 488 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAE 544
Query: 426 EMEKLGEVLNEIVKVE 441
++++ ++ E+V V+
Sbjct: 545 QLDRASKLAREMVAVK 560
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 158/391 (40%), Gaps = 78/391 (19%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + Y L+ Y + D F M C P K N +++ L H + AF
Sbjct: 284 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH-GKVDEAF 342
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+S H G +P+ SYNI++ A + ++M + G+ PD +Y LM
Sbjct: 343 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 402
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---- 302
C++ + + AV +L++M+ G PD ++Y TL++ L + +L +AY+L+ M GC
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 462
Query: 303 --------------------------------NPDIVHYNTVVLGFCREGRAIDACKVLE 330
+ V YN + C+EGR +A +L
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY--------------------------- 363
+M + L + VSY T++ GLC D A K
Sbjct: 523 EMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 579
Query: 364 ---------MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
++LM+ +G SP + +I C + KVD+A + +E+ G ++
Sbjct: 580 KRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 639
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++ +C ++ +VL E+ + + D
Sbjct: 640 TVLIYGLCGQGRGKEALQVLEEMASSDCEID 670
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY L+ + + D A+ ++M++ P N ++ L + N L A
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL-SQTNRLGDA 446
Query: 186 FDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
++L ++G V+ +YN ++ C G + A L + M GV + +Y I +
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 506
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCN 303
LC++ +++ A LL +M + D +SYTT++ LC+ ++L A KL M VKG
Sbjct: 507 RLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 563
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+N ++ F + R +A +LE M GC P++++Y ++ LC D A +
Sbjct: 564 ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 623
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
M +G LI G C G+ EA VLEE+
Sbjct: 624 FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 48/338 (14%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPS 131
S P A+++ D Q TY L+ + + + F DD + LK+ V P
Sbjct: 371 SKPKEARQVLDQMI-QAGIPPDAVTYNTLMAQFCKEERF---DDAVGILKNMIKAGVDPD 426
Query: 132 LFTY--LIKIYAESNLPDRALKTFRSMLEFNCK-PLPKQLNRILELLVTHRNYLRPAFDL 188
TY LI +++N A + ML C N I++ L L+ A L
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC-KEGCLKQALLL 485
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
HGV NT +YNI + C G + A +L ++M + D SY ++ GLC+
Sbjct: 486 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCK 542
Query: 249 KSQVNRA------------------------------------VDLLEDMLNKGFVPDTL 272
Q++RA + LLE M+ +G P +
Sbjct: 543 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVI 602
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++ LC+ K+ +A++L M V+G V Y ++ G C +GR +A +VLE+M
Sbjct: 603 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
S+ C + + R L L QG + A + ++ M +K
Sbjct: 663 ASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 136/257 (52%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A + + G +P+ +YN+++ C G A L M RG P V ++ IL
Sbjct: 136 RKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNIL 195
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LCRK + RA+D+LE M G P++LSY LL+ C++KK+ A + L +M +GC
Sbjct: 196 INFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGC 255
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDIV YNT++ C++G+ A ++L + S GC P L++Y T++ GL G D A K
Sbjct: 256 YPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAK 315
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M +KG P +L+ G GKVDEA +L G P+ T+ I+ +C
Sbjct: 316 LLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLC 375
Query: 423 AGEEMEKLGEVLNEIVK 439
+ ++ + L +V+
Sbjct: 376 KARKTDRAIDFLAYMVQ 392
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 8/305 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
K+G+ + + I +I+ E P + TY LI + A K M+ C
Sbjct: 131 KIGKTRKATRIMEII-----EDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGC 185
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N ++ L + L A D+ + KHG PN+ SYN ++ FC + A
Sbjct: 186 SPSVVTFNILINFLC-RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
KM RG PD+ +Y L+ LC+ +V+ AV+LL + +KG P ++Y T+++ L
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
+ K +A KLL M+ KG PDI+ Y+++V G REG+ +A K D+ G PN
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNA 364
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
++Y ++ GLC D A ++ M+ +G P + LI+G G EA +L E
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNE 424
Query: 402 LLKAG 406
L G
Sbjct: 425 LCLRG 429
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 139/253 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + G P+ ++NI++ C G + A + KM + G P+ SY L+
Sbjct: 173 AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLH 232
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C++ ++ RA++ L M ++G PD ++Y TLL +LC+ K+ A +LL ++ KGC+P
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSP 292
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ YNTV+ G + G+ A K+L++M + G P++++Y +LVGGL +G D A K+
Sbjct: 293 VLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFF 352
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ G P+ +A++ G C K D A L +++ G P E ++ +++ +
Sbjct: 353 HDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYE 412
Query: 425 EEMEKLGEVLNEI 437
++ E+LNE+
Sbjct: 413 GLAKEALELLNEL 425
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 122/237 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F +S G +P+ ++R FC G A + + + G +PDV +Y +
Sbjct: 100 LEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNV 159
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G+C + A LL DM+ +G P +++ L+N LCRK L A +L +M G
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P+ + YN ++ GFC+E + A + L M S GC P++V+Y TL+ LC G D A
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAV 279
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + + SKG SP + +I G VGK D+A +L+E+ G P T+ +V
Sbjct: 280 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLV 336
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 122/232 (52%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG++ + M RG +PD+ L++G C+ + +A ++E + + G VPD ++
Sbjct: 97 NGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVIT 156
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L++ +C + +A KLL M +GC+P +V +N ++ CR+G A VLE MP
Sbjct: 157 YNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMP 216
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+GC PN +SY L+ G C + + A +Y+ M S+G P + L+ C GKVD
Sbjct: 217 KHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVD 276
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A +L +L G +P T+ ++ + + ++ ++L+E+ +K D
Sbjct: 277 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPD 328
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 132/284 (46%), Gaps = 22/284 (7%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR----------AFCFNGDISIAYTLF 224
L+ N+ F F+ H+ ++ + +R A FNG + L
Sbjct: 3 LIVRTNHSHEGFCSFQHLHRENTRTSSAFAGVRVRVRKLKRSRIFAVSFNGKLQSLDKLP 62
Query: 225 NKMFERGVMP-----------DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
N G + ++ES L + L R ++ LE M+ +G +PD +
Sbjct: 63 NGHLGNGHVSLSPIHSLTNFEEIESNNNLSK-LVRNGELEEGFRFLESMVYRGDIPDIIP 121
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T+L+ C+ K R+A +++ ++ G PD++ YN ++ G C GR +DA K+L DM
Sbjct: 122 CTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMV 181
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC P++V++ L+ LC +G+ A ++ M G +P+ + L+ GFC K++
Sbjct: 182 RRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKME 241
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
A L ++ G P T+ ++ +C +++ E+LN++
Sbjct: 242 RAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQL 285
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%)
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
N + + N + R G + + LE M G +P+++ +L+ G C G A +
Sbjct: 81 NFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATR 140
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+++ G P + LI G C+ G+ +A +L ++++ G +P T+ +++ +C
Sbjct: 141 IMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLC 200
Query: 423 AGEEMEKLGEVLNEIVK 439
+ + +VL ++ K
Sbjct: 201 RKGLLGRAIDVLEKMPK 217
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P L TY +I ++ D+A K M KP + ++ L + + A
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGL-SREGKVDEAI 349
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
F GV PN +YN +M C A M +RG P SY IL++GL
Sbjct: 350 KFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGL 409
Query: 247 CRKSQVNRAVDLLEDMLNKGFV 268
+ A++LL ++ +G V
Sbjct: 410 AYEGLAKEALELLNELCLRGVV 431
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +F ++ E+ L A K F +L + N L L + +R A
Sbjct: 177 WGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTA 236
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F +F+ + GV NT SYNI++ C G + A++L +M RG +PDV SY +++ G
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ Q+ + + L+E++ KG P+ +Y ++++ LC+ ++ EA ++L MK + PD
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y T++ GF + G K+ ++M +P+ V+Y +++ GLC G A+K
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+SKG P ALI G+C G++ EA + ++++ G P+ T+ +V +C
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 426 EMEKLGEVLNEI 437
E++ E+L+E+
Sbjct: 477 EVDIANELLHEM 488
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 150/299 (50%), Gaps = 18/299 (6%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI++ N+PD + ++ +++ C+ +QL ++L+L+ + +
Sbjct: 275 LIQMEFRGNVPD--VVSYSVIVDGYCQV--EQLGKVLKLM--------------EELQRK 316
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +YN ++ C G + A + M + + PD Y L+ G + V+
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L ++M K VPD ++YT++++ LC+ K+ EA KL M KG PD V Y ++ G
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+C+ G +A + M G PN+V+Y LV GLC G D+A + + M KG P+
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ALI G C VG +++A ++EE+ AG P T+ I+ C EM K E+L
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 136/255 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF G+ P+ +Y ++ +C G++ A++L N+M E+G+ P+V +Y L+
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +V+ A +LL +M KG P+ +Y L+N LC+ + +A KL+ M + G P
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + Y T++ +C+ G A ++L M G P +V++ L+ G C GM + ++ +
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG P+ + ++L+K +C + + + + G P +T+ +++ C
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Query: 425 EEMEKLGEVLNEIVK 439
M++ + E+V+
Sbjct: 651 RNMKEAWFLHKEMVE 665
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 128/248 (51%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ LF + ++P+ +Y M+ C G + A LF++M +G+ PD +Y L+ G
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++ A L M+ KG P+ ++YT L++ LC+ ++ A +LL M KG P+
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ G C+ G A K++E+M G P+ ++Y T++ C G A + ++
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+M+ KG P + L+ GFC G +++ +++ +L G P+ T+ ++ Q C
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Query: 426 EMEKLGEV 433
M E+
Sbjct: 617 NMRATIEI 624
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 163/337 (48%), Gaps = 8/337 (2%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
S + L L+ +LG+ K + + ++ E P + +Y ++ Y + + LK
Sbjct: 254 SYNIILHLLCQLGKVK-----EAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLK 308
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
+ KP N I+ L + A + + + P+ Y ++ F
Sbjct: 309 LMEELQRKGLKPNQYTYNSIISFLCKTGRVVE-AEQVLRVMKNQRIFPDNVVYTTLISGF 367
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
+G++S+ Y LF++M + ++PD +Y ++ GLC+ +V A L +ML+KG PD
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++YT L++ C+ +++EA+ L +M KG P++V Y +V G C+ G A ++L +
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G PN+ +Y L+ GLC G + A K M+ M GF P ++ +C +G+
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ +A +L +L G P T+ +++ C +E
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALK 151
N Y LI G++ S+ + +K + + P TY I+ ++ A K
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRK--KIVPDFVTYTSMIHGLCQAGKVVEARK 413
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
F ML KP +++ ++ AF L + G+ PN +Y ++
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGE-MKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G++ IA L ++M E+G+ P+V +Y L+ GLC+ + +AV L+E+M GF PDT
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++YTT++++ C+ ++ +A++LL M KG P IV +N ++ GFC G D ++++
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G +PN ++ +L+ C + + + M ++G P + + LIKG C
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652
Query: 392 VDEACGVLEELLKAG 406
+ EA + +E+++ G
Sbjct: 653 MKEAWFLHKEMVEKG 667
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC--FNGDISIAYTLFNKMFERGVMPDVESY 239
L A LF +GVL + S N+ + F+G I A+ +F + E GV + SY
Sbjct: 197 LLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDG-IRTAFRVFREYSEVGVCWNTVSY 255
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
I++ LC+ +V A LL M +G VPD +SY+ +++ C+ ++L + KL+ ++
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P+ YN+++ C+ GR ++A +VL M + P+ V Y TL+ G G V
Sbjct: 316 KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSV 375
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
K M K P F ++I G C GKV EA + E+L G P E T+ ++
Sbjct: 376 EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALID 435
Query: 420 QICAGEEMEKLGEVLNEIVK 439
C EM++ + N++V+
Sbjct: 436 GYCKAGEMKEAFSLHNQMVE 455
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP++ TY L+ + D A + M E +P N ++ L N + A
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN-IEQA 516
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G P+T +Y +M A+C G+++ A+ L M ++G+ P + ++ +LM G
Sbjct: 517 VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C + L++ ML+KG +P+ ++ +L+ C + +R ++ M +G PD
Sbjct: 577 FCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN ++ G C+ +A + ++M G SY +L+ G + F+ A+K +
Sbjct: 637 TNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFE 696
Query: 366 LMISKGF 372
M + GF
Sbjct: 697 EMRTHGF 703
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 91/174 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + G+ P ++N++M FC +G + L M ++G+MP+ ++ LM+
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C ++ + +++ + M +G VPDT +Y L+ C+ + ++EA+ L M KG +
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
YN+++ GF + + +A K+ E+M ++G + Y V ++G ++
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWE 724
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L+ + S + + + + ML+ P N +++ RN +R +++K
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI-RNNMRATIEIYKGM 628
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H GV+P+T +YNI+++ C ++ A+ L +M E+G SY L++G ++ +
Sbjct: 629 HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKF 688
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L E+M GF+ + Y ++
Sbjct: 689 EEARKLFEEMRTHGFIAEKEIYDIFVD 715
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 142/253 (56%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F S K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +L+
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLIN 214
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++S++N A DL +ML+KG VP+ +++TTL++ C+ K+ A + +M + P
Sbjct: 215 GLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLP 274
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YNT++ G C++G A +L++M G P+ ++Y TL+ G C +G D A +
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELR 334
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ + ALI G C G+ +A +L E+L G P T+ MI+ + C
Sbjct: 335 ETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Query: 425 EEMEKLGEVLNEI 437
E+++ ++L E+
Sbjct: 395 EDVKTAAKLLKEM 407
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ R T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 92 TREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F S+ ++ +P N ++ + + L F L + H GV P+ +Y+
Sbjct: 152 IWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGD-LDQGFKLKNAMHASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C ++ A LFN+M ++G++P+ ++ L+ G C+ +V+ A++ + ML++
Sbjct: 211 VLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
F+PD ++Y TL+ LC+K L++A LL M++KG PD + Y T++ G C+EG A
Sbjct: 271 CFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ E M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC V A +L+E+ + G P
Sbjct: 391 FCKKEDVKTAAKLLKEMQRQGHVP 414
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + + A F ML+ P +++ + + A
Sbjct: 202 VQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK-VDSA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ +K LP+ +YN ++ C GD+ A L ++M +G+ PD +Y L+ G
Sbjct: 261 METYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ ++ A +L E M+ + D ++YT L++ LC++ + +A K+L M G PD
Sbjct: 321 NCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPD 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y ++ FC++ A K+L++M G +P +V+
Sbjct: 381 NGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 188/372 (50%), Gaps = 18/372 (4%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTY---LILILKLGR-AKYFSLIDDILITLKSEHYPVTP 130
P LA +F +A+RQ +F+H+ TY L ++K G +K + DD+L + P
Sbjct: 17 PKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDML------YKECLP 70
Query: 131 SLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+++TY +++ + D AL+ + M P +N ++ L + + A++L
Sbjct: 71 NIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKN-GKVDAAYEL 129
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+K L SYN++ C I A +F +M E V+P + +Y L+ G CR
Sbjct: 130 YKRLSDECSLDRI-SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCR 188
Query: 249 KSQVNRAVDLLEDMLN--KG--FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ +A+ LLE+M+ KG VPD SY T+++ C+ ++L A +L RM GC+P
Sbjct: 189 AGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP 248
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +NT++ G C G+ +A + E M C P V+Y L+ G D A Y
Sbjct: 249 NVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYF 308
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ +G P+ ALI G C+ KV++A +L+ + G P+ T+ ++ +C G
Sbjct: 309 VDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKG 368
Query: 425 EEMEKLGEVLNE 436
++E+ ++ N+
Sbjct: 369 GQIERATKLFND 380
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 39/306 (12%)
Query: 188 LFKSAHKHGVLPNTK-SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+FK A + +T +YN + A G S A +F+ M + +P++ +Y I+++GL
Sbjct: 23 VFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGL 82
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
C ++ + A++LL+DM +K P T L++ LC+ K+ AY+L
Sbjct: 83 CDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRI 142
Query: 294 --------LCR-------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
LC+ M+ P ++ YN ++ G+CR GR A +LE+M
Sbjct: 143 SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM 202
Query: 333 ----PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ +P++ SY T++ G C A+ ++ MI G SP+ + L+ G C
Sbjct: 203 IEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCL 262
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK+DEA + E +++ P T+ +++ ++K + ++++ ++ +
Sbjct: 263 TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYT 322
Query: 449 VEAGIG 454
A IG
Sbjct: 323 YTALIG 328
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 45/272 (16%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE----FNCKPLPKQLNRILELLVT 177
E V PSL TY L+ Y + ++A+ M+E + P N ++
Sbjct: 168 EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCK 227
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R L A + + K G PN ++N ++ C G + A +F M ER P
Sbjct: 228 ARQ-LPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAV 286
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L+ G R ++++A D DML +G P+ +YT L+ LC K+ +A ++L RM
Sbjct: 287 TYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRM 346
Query: 298 KVKG--------------------------------------CNPDIVHYNTVVLGFCRE 319
G C PD Y+T+V CR+
Sbjct: 347 SSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQ 406
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ ++A + M + + Y+ + GL
Sbjct: 407 SKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 190/380 (50%), Gaps = 4/380 (1%)
Query: 73 SDPLLAKEIF-DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
DP A +F DY Q FRH +Y L+ KL R++ F ++ +L L+ + +
Sbjct: 59 EDPDKALSLFHDYL--QNGFRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVRCRDT 116
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
LF L + Y + L +A++ F M FNC + N +L +LV + + L A LF
Sbjct: 117 LFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDN-DRLFDAKQLFDR 175
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + G N+ +NI+++ + G+ A +F++M ER V P V +Y L+ LCR +
Sbjct: 176 SSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGE 235
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A L +DM+ KG P+ ++Y L+ LC + +EA K+L M+ +GC P +++
Sbjct: 236 LGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGV 295
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ ++G+ +A +L +M P++V Y L+ LC +G A K + M G
Sbjct: 296 LMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGG 355
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ + L GFC VG+ +E VL +L + AP +T+ V + ++
Sbjct: 356 CEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAF 415
Query: 432 EVLNEIVKVEIKGDTRIVEA 451
VL E+ K ++ D+ EA
Sbjct: 416 FVLEEMEKRKMALDSDGWEA 435
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 45/294 (15%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
AK++FD +S + FR ++ + ILI LK G + D ++ K V PS+ T
Sbjct: 169 AKQLFDRSS-EMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERK-----VEPSVVT 222
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y LI + +A F+ M++ +P ++E L + Y LF
Sbjct: 223 YNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDME 282
Query: 193 HK--------HGVL--------------------------PNTKSYNIMMRAFCFNGDIS 218
++ GVL P+ YNI++ C G ++
Sbjct: 283 YRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVA 342
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
AY +M G + +YR+L G C+ + + +L ML P ++ +
Sbjct: 343 EAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFV 402
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
L + + A+ +L M+ + D + +V C E R + + E +
Sbjct: 403 VGLMKSGSIDGAFFVLEEMEKRKMALDSDGWEALVRCCCSEHRGAGSVLLCESL 456
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 175/339 (51%), Gaps = 7/339 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP V KL+ S+ +P A +FD A+R P + HS Y ++ +L A+ + + I+
Sbjct: 9 SPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVEL 68
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
++S+ + +IK Y ++++PDRAL F+ M E F C+P + N +L V +
Sbjct: 69 IRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAK 128
Query: 180 NYLR--PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+++ F F++A GV PN ++YN++++ C + A N M++ G PDV
Sbjct: 129 QWVKVESLFAYFETA---GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVF 185
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR- 296
SY ++ L + +++ A++L ++M + PD Y L++ ++K + A +L +
Sbjct: 186 SYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKL 245
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
++ P++ +N ++ G + GR D K+ + M N +L +Y +L+ GLCD+G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGN 305
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
D A+ ++ + + ++ GFC GK+ E+
Sbjct: 306 VDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKES 344
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SYNI+++ NG I A ++ M +G D +Y I + GLC VN+A+ ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVM 417
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+++ +KG D +Y ++++ LC+K++L EA L+ M G + N ++ G R+
Sbjct: 418 QEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
R DA ++ M NGCLP +VSY L+ GLC+ G F A +++ M+ G P
Sbjct: 478 SRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTY 537
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
L+ G C K++ A + + L++G P +++ +C+ + KL + + +
Sbjct: 538 SILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCS---VGKLDDAMTVMAN 594
Query: 440 VEIKGDT-RIVEAGIGLEDYLIGKTRSRPRRT 470
+E + T +V +E Y K R R T
Sbjct: 595 MEHRNCTANLVTYNTLMEGYF--KVRDSNRAT 624
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L K KHGV N+ N ++ + +S A L M + G +P V SY I
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNI 504
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC + A +++ML G PD +Y+ LL LCR +K+ A +L + G
Sbjct: 505 LICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSG 564
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG---LCDQGMFD 358
PD++ +N ++ G C G+ DA V+ +M C NLV+Y TL+ G + D
Sbjct: 565 LEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRAT 624
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
V YM M G P + ++KG C +V A ++ G P TW ++V
Sbjct: 625 VIWGYMYKM---GLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681
Query: 419 PQI 421
+
Sbjct: 682 RAV 684
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 11/328 (3%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKI 139
F+ A PN + TY +LI + K F L + E + P +F+Y +I
Sbjct: 140 FETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLNWMWKEGFK--PDVFSYSTVIND 193
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF-KSAHKHGVL 198
A++ D AL+ F M E P N +++ + +++ + A L+ K V
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDH-KMAMQLWDKLLEDSSVY 252
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN K++NIM+ G + ++++M + D+ +Y L+ GLC + V++A +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESV 312
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+++ + D ++Y T+L CR K++E+ +L M+ + + +IV YN ++ G
Sbjct: 313 FNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLE 371
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G+ +A + MP+ G + +Y + GLC G + A MQ + SKG
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYA 431
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAG 406
++I C +++EA +++E+ K G
Sbjct: 432 YASIIDCLCKKRRLEEASNLVKEMSKHG 459
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + K+G LP SYNI++ C G A +M E G+ PD+++Y I
Sbjct: 480 LSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSI 539
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLCR ++ A++L L G PD + + L++ LC KL +A ++ M+ +
Sbjct: 540 LLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C ++V YNT++ G+ + + A + M G P+++SY T++ GLC A
Sbjct: 600 CTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAI 659
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCN 388
++ + G P + L++ N
Sbjct: 660 EFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 38/249 (15%)
Query: 164 LPKQLN--RILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIA 220
PK L+ +L+LL + +N R AF LF SA +H G + Y+ ++R ++
Sbjct: 4 FPKSLSPKHVLKLLKSEKN-PRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHV 62
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + + D + +++ + S +RA+D+
Sbjct: 63 GRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVF--------------------- 101
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
K++RE + GC P I YNT++ F + + + + G PN
Sbjct: 102 ----KRMREIF---------GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPN 148
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
L +Y L+ C + F+ A+ ++ M +GF P +I GK+D+A + +
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFD 208
Query: 401 ELLKAGEAP 409
E+ + AP
Sbjct: 209 EMSERRVAP 217
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/184 (17%), Positives = 78/184 (42%), Gaps = 5/184 (2%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---RA 322
G+ + Y +L L + + +++ ++ + C D +V+ + + RA
Sbjct: 38 GYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRA 97
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+D K + ++ GC P + SY TL+ + + + + G +P+ + L
Sbjct: 98 LDVFKRMREIF--GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
IK C + ++A G L + K G P ++ ++ + +++ E+ +E+ + +
Sbjct: 156 IKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRV 215
Query: 443 KGDT 446
D
Sbjct: 216 APDV 219
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 18/372 (4%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTY---LILILKLGR-AKYFSLIDDILITLKSEHYPVTP 130
P LA +F +A+RQ +F H+ TY L ++K G +K + DD+L + P
Sbjct: 17 PKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDML------YKECLP 70
Query: 131 SLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+++TY +++ + D AL+ + M P +N ++ L + + A++L
Sbjct: 71 NIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKN-GKVDAAYEL 129
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+K L SYN++ C I A +F +M E V+P + +Y L+ G CR
Sbjct: 130 YKRLSDECSLDRI-SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCR 188
Query: 249 KSQVNRAVDLLEDMLN--KG--FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ +A+ LLE+M+ KG VPD SY T+++ C+ ++L A +L RM GC+P
Sbjct: 189 AGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP 248
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +NT++ G C G+ +A + E M C P V+Y L+ G D A Y
Sbjct: 249 NVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYF 308
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ +G P+ ALI G C+ KV++A +L+ + G P+ T+ ++ +C G
Sbjct: 309 VDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKG 368
Query: 425 EEMEKLGEVLNE 436
++E+ ++ N+
Sbjct: 369 GQIERATKLFND 380
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 39/306 (12%)
Query: 188 LFKSAHKHGVLPNTK-SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+FK A + +T +YN + A G S A +F+ M + +P++ +Y I+++GL
Sbjct: 23 VFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGL 82
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
C ++ + A++LL+DM +K P T L++ LC+ K+ AY+L
Sbjct: 83 CDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRI 142
Query: 294 --------LCR-------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
LC+ M+ P ++ YN ++ G+CR GR A +LE+M
Sbjct: 143 SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM 202
Query: 333 ----PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ +P++ SY T++ G C A+ ++ MI G SP+ + L+ G C
Sbjct: 203 IEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCL 262
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK+DEA + E +++ P T+ +++ ++K + ++++ ++ +
Sbjct: 263 TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYT 322
Query: 449 VEAGIG 454
A IG
Sbjct: 323 YTALIG 328
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 45/272 (16%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE----FNCKPLPKQLNRILELLVT 177
E V PSL TY L+ Y + ++A+ M+E + P N ++
Sbjct: 168 EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCK 227
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R L A + + K G PN ++N ++ C G + A +F M ER P
Sbjct: 228 ARQ-LPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAV 286
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L+ G R ++++A D DML +G P+ +YT L+ LC K+ +A ++L RM
Sbjct: 287 TYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRM 346
Query: 298 KVKG--------------------------------------CNPDIVHYNTVVLGFCRE 319
G C PD Y+T++ CR+
Sbjct: 347 SSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQ 406
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ ++A + M + + Y+ + GL
Sbjct: 407 SKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 4/340 (1%)
Query: 110 YFSLIDDILITLK---SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+F+ +DD L + H P + FT L+ A+ L M F P
Sbjct: 89 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 148
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
LN ++ H L AF + K G P+ ++N ++R C G I A LF+K
Sbjct: 149 TLNILINSF-CHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 207
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
G PDV +Y LM GLC+ + A+ LL M+ K P+ ++Y T+++SLC+ ++
Sbjct: 208 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA+ L M KG +PDI YN+++ C +L +M ++ +PN+V + T
Sbjct: 268 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 327
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V LC +GM +A + +MI +G P AL+ G C ++DEA V + ++ G
Sbjct: 328 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 387
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ ++ +++ C + M+K +L ++ + DT
Sbjct: 388 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 427
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 135/269 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L +S + PN +YN ++ + C + ++ A+ LF++M +G+ PD+ +Y L+
Sbjct: 236 AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIH 295
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC + LL +M+N +P+ + ++T++++LC++ + A+ ++ M +G P
Sbjct: 296 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 355
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V Y ++ G C +A KV + M GC+PN+ SY L+ G C D A +
Sbjct: 356 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 415
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M +G + LI G C+VG++ A + E++ +G+ P T+ +++ +C
Sbjct: 416 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 475
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ + +L I + D + I
Sbjct: 476 HHLAEAMVLLKAIEGSNLDADILVYNIAI 504
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 36/282 (12%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ RSM++ NC+P N I++ L R + AF+LF G+ P+ +YN ++
Sbjct: 236 AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ-VTEAFNLFSEMITKGISPDIFTYNSLI 294
Query: 209 RAFCF-----------------------------------NGDISIAYTLFNKMFERGVM 233
A C G I+IA+ + + M +RGV
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV +Y LM G C +S+++ AV + + M++KG VP+ SY L+N C+ +++ +A L
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L +M ++G D V YNT++ G C GR A + +M ++G +P+LV+YR L+ LC
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
A ++ + V + I G C G+++ A
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 516
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
++P +FTY I+A NL + T N K +P + + +++ L + A
Sbjct: 283 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK-EGMIAIA 341
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ K GV P+ +Y +M C ++ A +F+ M +G +P+V SY IL+ G
Sbjct: 342 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 401
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++++A+ LLE M +G + DT++Y TL++ LC +L+ A L M G PD
Sbjct: 402 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 461
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y ++ C+ +A +L+ + + +++ Y + G+C G + A+
Sbjct: 462 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 521
Query: 366 LMISKGFS 373
+ +GF+
Sbjct: 522 NLSCQGFA 529
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 194/393 (49%), Gaps = 8/393 (2%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS---LIDDILITL 121
V+ L + P +A F +A RQ F+ S TY +++ L R + + ++++
Sbjct: 51 VRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSV 110
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
K E+ V + L+ IYA+ ++ ++ L F M+ P K NR+L LL +
Sbjct: 111 KMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSS 170
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +++ + G+ P +YN M+ +FC G + A L +M + G +P+ +Y +
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL ++ +A +L+++ML G +Y L+ C K +L EA +L M +G
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P +V YNT++ G C+ GR DA K+L+ M + +P+LVSY TL+ G G A
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ +G P + LI G C +G +D A + +E++K G P T+ ++V
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD-----TRIV 449
C + E+ +E++ ++ D TRIV
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIV 443
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 132/253 (52%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
KHG P+ ++ I++R FC G++ +A LF++M RG+ PD +Y + G + +
Sbjct: 393 KHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 452
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+A + E+ML +GF PD ++Y ++ L + L+EA +L+ +M G PD V Y +++
Sbjct: 453 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 512
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G A V +M S G P++V+Y L+ +G +A + M KG
Sbjct: 513 HAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH 572
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ +ALI G C V K+D+A E+ G +P++ T+ +++ + C ++ +
Sbjct: 573 PNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRL 632
Query: 434 LNEIVKVEIKGDT 446
+++ EI+ D+
Sbjct: 633 YKDMLDREIQPDS 645
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G +P +YN +M C G +S A L + M + +MPD+ SY L+ G R + A
Sbjct: 290 GAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 349
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L ++ +G VP ++Y TL++ LCR L A +L M G +PD+ + +V G
Sbjct: 350 FLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRG 409
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G A ++ ++M + G P+ +Y T + G G A + M+++GF P
Sbjct: 410 FCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 469
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ I G +G + EA +++++L G P T+ I+ + K V
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFL 529
Query: 436 EIV 438
E++
Sbjct: 530 EML 532
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 22/314 (7%)
Query: 110 YFSLID--------DILITLKSE---HYPVTPSLFTYLIKIYA---ESNLPDRALKTFRS 155
Y +LID D+ + LK E H P P +FT+ I + NLP A + F
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGP-DPDVFTFTILVRGFCKLGNLP-MAKELFDE 425
Query: 156 MLEFNCKPLP-KQLNRIL-ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML +P + RI+ EL + + AF + + G P+ +YN+ +
Sbjct: 426 MLNRGLQPDRFAYITRIVGELKLGDPS---KAFGMQEEMLARGFPPDLITYNVFIDGLHK 482
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++ A L KM G++PD +Y ++ + +A + +ML+KG P ++
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT L++S + +L+ A M KG +P+++ YN ++ G C+ + A K +M
Sbjct: 543 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ 602
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G PN +Y L+ C+ G + A + + M+ + P S +H+ + N
Sbjct: 603 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPD-SCTHSALLKHLNKDYKS 661
Query: 394 EACGVLEELLKAGE 407
LE ++ AGE
Sbjct: 662 HVVRHLENVIAAGE 675
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 197/394 (50%), Gaps = 16/394 (4%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN-------FRHSNSTYLILILKLG 106
N PI +P R+ L+ Q DP LA ++F + PN FR+S +Y ++I KLG
Sbjct: 2 NPSRPI-TPFRLASLLRLQKDPKLALQLF----KNPNPKTPSKPFRYSLLSYDLIITKLG 56
Query: 107 RAKYFSLIDDILITLKSEH-YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP 165
RAK F+ + +IL LK E + +LF +I Y + LP+ ALK + F +
Sbjct: 57 RAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTV 116
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
K N +L + + +++ + +LF K G + +YN+++R FC +G + A +F+
Sbjct: 117 KSYNSLLSVFLMCKDFDKMR-ELFVGIEKLGK-ADACTYNLLIRGFCASGRLDDASKVFD 174
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRK 284
+M RGV P+V ++ L+ G C ++ A L DM+ V P+ Y +L+ +C+
Sbjct: 175 EMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKN 234
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
+L A++L M D Y+T++ G + GR +A V EDM G P+ V+Y
Sbjct: 235 GELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTY 294
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
++ C F+ A + + M+ KG P + +++ GK EA + E++ +
Sbjct: 295 NVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPR 354
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G AP ++ ++ C G + ++ +L+E++
Sbjct: 355 RGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMI 388
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 3/309 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI+ + S D A K F M P ++ H L+ AF L
Sbjct: 153 YNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLR-LKEAFKLKTDM 211
Query: 193 HK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
K + V PN Y +++ C NG++S+A+ L +M + D Y L+ GL + +
Sbjct: 212 VKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGR 271
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ + EDM +G+ PDT++Y ++N C+ K AY+LL M KGC PD++ YN
Sbjct: 272 KEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNV 331
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ EG+ +A + EDMP GC P++VSYR L G C+ F A + MI KG
Sbjct: 332 ILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKG 391
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
F P + + C GK ++ L+ G+ + D W M V + +++
Sbjct: 392 FVPCSASICKFVNRLCE-GKNEDLLRSAFNTLEKGKLVNVDLWRMAVAMVFKDDKLSSSF 450
Query: 432 EVLNEIVKV 440
+++ ++ V
Sbjct: 451 NLVDSLIDV 459
>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 185/387 (47%), Gaps = 22/387 (5%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQP-------NFRHSNSTYLILILKLGRAKYFSLIDDI 117
+ +L+ + DP A +FD A+ P S T +L +L A L +
Sbjct: 40 LHRLVRGERDPRRALALFDAATAAPVSTSVPTQILPSPDTVSLLTSRLASAGLLPLATSL 99
Query: 118 LITLKSEHYPVTPSL---FTYLIKIYAESNLPDRALKTFRSMLEFNCKP-LPKQLNRILE 173
L ++ +P L F L++ + ++ P AL+ FRS P + +L
Sbjct: 100 LSRSRA-LFPSNADLEPPFLTLLRAFCRTHRPLDALQLFRSAPSALSLPHSARSYTAVLA 158
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
LV H ++L A L G P T +YN++++A C + I + ++F
Sbjct: 159 GLVAH-SHLPLAHSLLADMRASGFGPTTATYNVLLKAHCSDAAAHIDDAV--RLFRNIPK 215
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PD SY L+ GLCR+S+ A +L +M+ G P ++YTT++N L R+ L +A ++
Sbjct: 216 PDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTVVTYTTIINWLAREGCLDDALEM 275
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M +G P++V Y++++ G C+ GRA A +LE + LPN + Y +++ GLC
Sbjct: 276 FDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLPNTIIYSSVINGLCK 335
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+G+ A + + M +G P + LI G C+ G+ EA L+E++ AG P+ T
Sbjct: 336 EGLLREAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGVQPNRVT 395
Query: 414 W-------VMIVPQICAGEEMEKLGEV 433
W V +V +C E+ + +V
Sbjct: 396 WSLHVRINVAVVTALCVKGEVGRAFQV 422
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 183/354 (51%), Gaps = 16/354 (4%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A ++F A + HS +Y ++ L + L +L +++ + T + +
Sbjct: 130 PLDALQLFRSAPSALSLPHSARSYTAVLAGLVAHSHLPLAHSLLADMRASGFGPTTATYN 189
Query: 135 YLIKIY---AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+K + A +++ D A++ FR++ KP N +++ L R+ A +LF
Sbjct: 190 VLLKAHCSDAAAHI-DDAVRLFRNI----PKPDACSYNTLIDGLC-RRSRRVEAQELFSE 243
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
++G+ P +Y ++ G + A +F++M RG+ P+V +Y L+ GLC+ +
Sbjct: 244 MVENGIAPTVVTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGR 303
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+DLLE + + +P+T+ Y++++N LC++ LREA ++L RM+++G PD +
Sbjct: 304 AASALDLLERLAKEVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGLFGK 363
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR-------TLVGGLCDQGMFDVAKKYM 364
+++G C GRA++A L++M G PN V++ +V LC +G A +
Sbjct: 364 LIVGLCDAGRAVEAANYLDEMVLAGVQPNRVTWSLHVRINVAVVTALCVKGEVGRAFQVY 423
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
Q M ++G S S H L++ F +++A V+ ++L P +TW +IV
Sbjct: 424 QSMRTRGISTEPSTFHLLVEFFSKKNHLEKAAHVVLDMLSERCIPERETWDVIV 477
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 14/264 (5%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP---DVES-YRILMQGLCRKSQV 252
+LP+ + +++ G + +A +L ++ R + P D+E + L++ CR +
Sbjct: 73 ILPSPDTVSLLTSRLASAGLLPLATSLLSR--SRALFPSNADLEPPFLTLLRAFCRTHRP 130
Query: 253 NRAVDLLEDMLNKGFVPDTL-SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ L + +P + SYT +L L L A+ LL M+ G P YN
Sbjct: 131 LDALQLFRSAPSALSLPHSARSYTAVLAGLVAHSHLPLAHSLLADMRASGFGPTTATYNV 190
Query: 312 VVLGFCREGRA--IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
++ C + A DA ++ ++P P+ SY TL+ GLC + A++ M+
Sbjct: 191 LLKAHCSDAAAHIDDAVRLFRNIPK----PDACSYNTLIDGLCRRSRRVEAQELFSEMVE 246
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G +P +I G +D+A + +E+ + G AP+ T+ ++ +C G
Sbjct: 247 NGIAPTVVTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAAS 306
Query: 430 LGEVLNEIVKVEIKGDTRIVEAGI 453
++L + K E+K I+ + +
Sbjct: 307 ALDLLERLAK-EVKLPNTIIYSSV 329
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 196 GVLPNTKSYNIMMR-------AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
GV PN ++++ +R A C G++ A+ ++ M RG+ + ++ +L++ +
Sbjct: 388 GVQPNRVTWSLHVRINVAVVTALCVKGEVGRAFQVYQSMRTRGISTEPSTFHLLVEFFSK 447
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR-EAYKLLCRMKV 299
K+ + +A ++ DML++ +P+ ++ +++ KKK+R EA ++ ++ V
Sbjct: 448 KNHLEKAAHVVLDMLSERCIPERETWDVIVSGYWSKKKVRQEAEQIWNKLAV 499
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 39/348 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ +S D A + +M+ C P + +L L L A
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC-KAGKLDEATA 276
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G PN +YN ++ C G I AY L +M + G P+V +Y +L+ C
Sbjct: 277 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 336
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A+ L+E M+ KG+VP+ +Y +LL+ C+K ++ A +LL M KGC P++V
Sbjct: 337 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSN-------------------------------- 335
YNTV+ G C+ + + +LE M SN
Sbjct: 397 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456
Query: 336 ---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGK 391
GC PNLV+Y +LV GLC FD A+ ++ M K G SP + +I G C +
Sbjct: 457 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 516
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
VD A + ++L G AP + T+ +++ +C M++ VL ++K
Sbjct: 517 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 156/322 (48%), Gaps = 39/322 (12%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ FR M + C P N ++ L + + L A L + +G PN SYN ++
Sbjct: 29 AVLHFREMSK-TCPPDSVTYNTMINGL-SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 86
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC + A L +M RG PDV SY ++ GLC+ QV+ A +++ M+ +G
Sbjct: 87 HGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 146
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--------------------------- 301
P+ ++Y TL++ CR L A +L+ +M +G
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206
Query: 302 ---------CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
C PD+ Y+T+V + G+ DAC+++E M S GC PN+V+Y +L+ GLC
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D A +Q M G SP+ + +I G C +G++DEA +LEE++ G P+
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326
Query: 413 TWVMIVPQIC-AGEEMEKLGEV 433
T+ +++ C G+ + +G V
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLV 348
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 39/356 (10%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY +I + + D A M++ C+P +L+ A
Sbjct: 287 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC-GKAEDAI 345
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + + G +PN +YN ++ FC ++ A L + M ++G +P+V SY ++ GL
Sbjct: 346 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 405
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
C+ ++V+ V LLE ML+ VPD +++ T+++++C+ ++ AY+L
Sbjct: 406 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 465
Query: 294 ---------LCR--------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
LC+ + +GC+PDI+ YNTV+ G C+ R A K+
Sbjct: 466 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 525
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M S+G P+ V+Y ++ LC D A ++LM+ GF P LI GFC G
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+D+A +L+ LL G P T+ + + + + + GE+L +++ + DT
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 641
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 124/217 (57%), Gaps = 1/217 (0%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++ G+ + + ++R C G S A F +M + PD +Y ++ GL + ++
Sbjct: 2 NRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRL 60
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A+ LLE+M++ GF P+ SY T+L+ C+ ++ A LL +M ++GC PD+V Y TV
Sbjct: 61 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ + +AC+V++ M GC PN+++Y TLV G C G D A + ++ M +G+
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
P+ + ++ G C+ K+D A + +E+ ++G P
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP 217
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLV-THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ML NC P N I++ + T+R + A++LF + G PN +YN ++
Sbjct: 418 LEQMLSNNCVPDIVTFNTIIDAMCKTYR--VDIAYELFNLIQESGCTPNLVTYNSLVHGL 475
Query: 212 CFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C + A L +M + G PD+ +Y ++ GLC+ +V+RA L ML+ G PD
Sbjct: 476 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 535
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+ +++SLC+ + + EA +L M G +P + Y T++ GFC+ G A ++L+
Sbjct: 536 DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ S G P++V++ + L +G A + ++ M+ G P + L+KGFC+
Sbjct: 596 LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDAS 655
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++A + E + + G P T+ +V +
Sbjct: 656 RTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 147 DRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D AL+ F+ M E +C P + I++ LV + A L ++ G PN +Y+
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDSLV-KSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G + A L +M G P++ +Y ++ G C+ +++ A LLE+M++
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ ++YT LL++ C+ K +A L+ M KG P++ YN+++ FC++ A
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
C++L M GC+PN+VSY T++ GLC ++ M+S P + +I
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
C +VD A + + ++G P+ T+ +V +C ++ +L E+ +
Sbjct: 440 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 493
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M +G+ ++ +++GLC Q + AV +M +K PD+++Y T++N L + +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L +A +LL M G P++ YNTV+ GFC+ R +A +LE M GC P++VSY T
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC D A + M MI +G P+ L+ GFC VG +D A ++ ++ + G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P+ T+ I+ +C+G +++ ++ E+
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I ++ D A + F + E C P N ++ L R + + + L +
Sbjct: 433 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 492
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G P+ +YN ++ C + + AY LF +M G+ PD +Y I++ LC+ +
Sbjct: 493 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 552
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A ++LE ML GF P ++Y TL++ C+ L +A ++L + KG PD+V ++
Sbjct: 553 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 612
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + GR A ++LE M G +P+ V+Y TL+ G CD + A ++M G
Sbjct: 613 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGC 672
Query: 373 SPHFSVSHALI 383
P + L+
Sbjct: 673 EPDNATYTTLV 683
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M KG + ++L LC + +A L R K C PD V YNT++ G + R
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDR 59
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA ++LE+M NG PN+ SY T++ G C + A ++ M+ +G P
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I G C + +VDEAC V++++++ G P+ T+ +V C +++ E++ ++ +
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 162/334 (48%), Gaps = 34/334 (10%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY-----LRPAFDLFKSAH-------- 193
D AL +F M+ N +P + + L + Y L DLF+ H
Sbjct: 75 DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134
Query: 194 ---------------------KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
K G+ P+ ++N ++ C G I A LFN+M +RG
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P+V SY ++ GLC+ + AVD+ + M G P+ ++Y+T+++SLC+ + + +A +
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L M +G P++ YN++V GFC G+ +A ++ ++M +PN V++ LV GLC
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+GM A+ + M KG P S +AL+ G+C ++EA V E +++ G AP
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ +++ C M++ +L E+ + DT
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 147/299 (49%), Gaps = 3/299 (1%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P++ TY +I + L + A++ M+E P N I+ +
Sbjct: 223 KMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFC-NL 281
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A LFK V+PNT ++ I++ C G +S A +F M E+GV PD+ +Y
Sbjct: 282 GQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTY 341
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM G C + +N A + E M+ KG P SY L+N C+ +++ EA LL M
Sbjct: 342 NALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K NPD V Y+T++ G C+ GR +A + ++M S G PNLV+Y L+ G C G D
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ M K P+ LI+G GK++ A + +L G P T+ +++
Sbjct: 462 ALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 143/277 (51%), Gaps = 2/277 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+FK ++G PN +Y+ ++ + C + ++ A ++M ERG+ P+V +Y ++
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C Q+N A L ++M+ + +P+T+++T L++ LC++ + EA + M KG P
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI YN ++ G+C + +A KV E M GC P SY L+ G C D AK +
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL 396
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M K +P L++G C +G+ EA + +E+ G P+ T+V+++ C
Sbjct: 397 AEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKH 456
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIG 461
+++ ++L + E K + IV I +E I
Sbjct: 457 GHLDEALKLLKSM--KEKKLEPNIVHYTILIEGMFIA 491
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 2/327 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K H P S +T +I ++ A+ F+ M + CKP + I++ L R
Sbjct: 190 VKRGHEPNVIS-YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR- 247
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A + + G+ PN +YN ++ FC G ++ A LF +M R VMP+ ++
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ GLC++ V+ A + E M KG PD +Y L++ C ++ + EA K+ M K
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC P YN ++ G+C+ R +A +L +M P+ V+Y TL+ GLC G A
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M S G P+ L+ GFC G +DEA +L+ + + P+ + +++
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+ ++E E+ +++ + D R
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIR 514
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 154/313 (49%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++FTY ++ NL + A + F+ M+ + P +++ L + A
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK-EGMVSEA 322
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ + GV P+ +YN +M +C ++ A +F M +G P SY IL+ G
Sbjct: 323 RLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILING 382
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A LL +M +K PDT++Y+TL+ LC+ + +EA L M G +P+
Sbjct: 383 YCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y ++ GFC+ G +A K+L+ M PN+V Y L+ G+ G +VAK+
Sbjct: 443 LVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFS 502
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ G P +IKG G DEA + ++ G P+ ++ +++ +
Sbjct: 503 KLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQ 562
Query: 426 EMEKLGEVLNEIV 438
+ +++E+V
Sbjct: 563 DSSTAIRLIDEMV 575
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 153/312 (49%), Gaps = 8/312 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ + + A F +M E +P N +++ R + A +F+
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQR-LMNEAKKVFEIM 364
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G P SYNI++ +C + + A +L +M+ + + PD +Y LMQGLC+ +
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A++L ++M + G P+ ++Y LL+ C+ L EA KLL MK K P+IVHY +
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTIL 484
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G G+ A ++ + +G P++ +Y ++ GL +G+ D A + M GF
Sbjct: 485 IEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ + +I+GF A +++E++ + + T+ M++ ++E E
Sbjct: 545 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL-------DLESQDE 597
Query: 433 VLNEIVKVEIKG 444
++++ ++ +G
Sbjct: 598 IISQFMRGSSQG 609
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 192/379 (50%), Gaps = 7/379 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D + E+F +A Q + H Y +LI KLG A F D +L+
Sbjct: 95 TPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQ 154
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E SLF ++K Y + LP +A + M ++C+P + N +L++L+
Sbjct: 155 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG- 213
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + ++F G+ P ++ ++M+A C ++ A L M G +P+ Y
Sbjct: 214 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 273
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L+ L + +VN + LLE+ML G +PD ++ ++ LC+ ++ EA KL+ RM +
Sbjct: 274 QTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLL 333
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P+ Y ++ G CR G+ +A +L +P+ PN+V + TL+ G +G D
Sbjct: 334 RGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDE 389
Query: 360 AKKYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
AK M + M+S G P + LI G C G + A ++ E+ G P+ T+ +++
Sbjct: 390 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 449
Query: 419 PQICAGEEMEKLGEVLNEI 437
+ C +E+ VL+E+
Sbjct: 450 DRFCKEGRLEEARNVLDEM 468
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 1/294 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI + + ++L + + + + LI + AL F M
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
CKP N ++ + N A L++ GV+ NT +YN ++ AF G
Sbjct: 504 SSKGCKPDIFTFNSLI-FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L N M RG D +Y L++ LCR + + + L EDM++KG P+ +S
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N LCR ++ A + L M +G PDIV YN+++ G C+ GRA +A + + + G
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
P+ ++Y TL+ C +GMFD A + + GF P+ + L+ F G
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 124/241 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++ G+ N YN ++ A C + + A +F M +G PD+ ++
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A+ L +DML +G + +T++Y TL+++ R+ ++EA KL+ M +G
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ CR G + EDM S G PN +S L+ GLC G A
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++++ MI +G +P ++LI G C G+ EA + ++L G P T+ ++
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 697
Query: 422 C 422
C
Sbjct: 698 C 698
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 147/314 (46%), Gaps = 5/314 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFR-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
LF LI Y D A SML C P N ++ L + + YL A +L
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI-LGLCKKGYLVSARELMN 431
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G PN +Y I++ FC G + A + ++M +G+ + Y L+ LC+
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+V A+++ DM +KG PD ++ +L+ LC+ K EA L M ++G + + YN
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T++ F R G +A K++ DM GC + ++Y L+ LC G + + M+SK
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G +P+ + LI G C G + A L +++ G P T+ ++ +C +
Sbjct: 612 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ-- 669
Query: 431 GEVLNEIVKVEIKG 444
E LN K++++G
Sbjct: 670 -EALNLFDKLQVEG 682
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 152/312 (48%), Gaps = 6/312 (1%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPAF 186
TP+ FTY + ++ R K + + N P P + N ++ V+
Sbjct: 337 TPNSFTYGVLMHGLC----RMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKA 392
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ +S G P+ +YN ++ C G + A L N+M +G P+V +Y IL+
Sbjct: 393 VMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRF 452
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++ A ++L++M KG + + Y L+++LC+ +K+++A + M KGC PDI
Sbjct: 453 CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 512
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+N+++ G C+ + +A + +DM G + N ++Y TL+ +G A K +
Sbjct: 513 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 572
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ +G + LIK C G +++ + E+++ G P+ + +++ +C
Sbjct: 573 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 632
Query: 427 MEKLGEVLNEIV 438
++ E L +++
Sbjct: 633 IQHALEFLRDMI 644
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 179/363 (49%), Gaps = 7/363 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+E++ + + ++ N +Y ILI G AK L + + I + TPS+ Y
Sbjct: 64 AREVYQHMV-ESGYKPDNVSYHILIH--GLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ A++ D A F M+ P + + L L + ++ A + FK KH
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHP-DRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PN YN+++ C +G + A TLF +M PDV +Y L+ +C+ +V
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L E M G+VP+ ++++TL++ LCR +L +A ++ M GC P+ Y T++ G
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSP 374
CR + I A ++ E M P+ V+Y +L+ G C +G D A+K Y ++ G P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ LI GFC +GK+ A ++ E+ G A T+ +++ + ++++ EV
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419
Query: 435 NEI 437
++
Sbjct: 420 KQM 422
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ ++FTY +IK + P+ + K M+ C P N +++ N + A
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN-MEKA 64
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++++ + G P+ SY+I++ G + + + ++M RG P +++Y L++
Sbjct: 65 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + +V+ A L ++M+ G PD L + L+ LC+ K+++A + +M GC P+
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ G C G+ A + +M S+ C P++V+Y TL+ +C + K +
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFE 244
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M + G+ P+ LI G C G++++A V +L+AG P++ T+ ++ +C E
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
++ + E+ ++ + I D
Sbjct: 305 KVIQARELFEKMTQACIPPDA 325
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ + +A+ + +++ Y F+ LI + ++AL+ F SM
Sbjct: 222 TYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 281
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE CKP ++ L ++ A +LF+ + + P+ +YN ++ +C G
Sbjct: 282 LEAGCKPNKYTYTTLISGLCRAEKVIQ-ARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 340
Query: 217 ISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L+ +M G+ P + ++ L+ G C+ ++ RA +L+ +M KG D+ +Y
Sbjct: 341 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYR 400
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L+ L R KL EA ++ +M+ K D V + V G C+ G A V E +
Sbjct: 401 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 460
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
G +PN ++R L L G + A+K M+
Sbjct: 461 GAVPNPETFRILSESLIKLGRVEDAQKLME 490
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M +K + +Y++++ SL ++ K E+YK+L M GCNPD+ +N V+ GF R
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A +V + M +G P+ VSY L+ GL G D + K + M+ +G +P +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
L++ +VD A + +E+++ G P + ++ +C +++ E ++ K
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 104/211 (49%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M ++ + +V +Y +++ L ++++ + +LE+M+ G PD ++ ++ R
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ +A ++ M G PD V Y+ ++ G + G+ ++ K+L +M G P++ +Y +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
LV L D A MI G P + + LI G C GKV +A +++ K G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P+ + +++ +C+ ++E+ + E+
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 175/348 (50%), Gaps = 3/348 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP RV KL+ S+ +P A IFD +R P + H+ + ++ +L K + + I+
Sbjct: 9 SPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVEL 68
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
++++ + +IK YA++++PD+AL F+ M E F C+P + N +L L+
Sbjct: 69 IRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI-ES 127
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N A F G+ PN ++YNI+++ C A L N M+E+G PDV SY
Sbjct: 128 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR-MK 298
L+ L + ++ A+ L ++M +G PD Y L++ +K + A ++ R +K
Sbjct: 188 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P+I YN ++ G C+ G+ ++ ++ M N +L +Y TL+ GLC G D
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A + + M G SP V + ++ G+ G+++E + + + K G
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 12/371 (3%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D L A EI++ + P+ + +Y ++I L + F +I +K
Sbjct: 232 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-----F 186
++ LI S D A + ++ M E P N +L YLR
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTML------NGYLRAGRIEECL 345
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L+K K G SYNI++R N + A +++ + E+ D +Y +L+ GL
Sbjct: 346 ELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +N+A+ +LE+ N DT +Y++++N LCR+ +L E +L +M GC P+
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N V+ GF R + DA + +M S GC P +V+Y TL+ GL F A ++
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ KG+ P+ L+ G C K+D A + + L+ G P +I+ +C+ +
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 427 MEKLGEVLNEI 437
+E ++ +E+
Sbjct: 585 VEDALQLYSEM 595
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
KHG PN N ++ F + A F M +G P V +Y L+ GL + + +
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L+++ML+KG+ P+ ++Y+ L+N LC+ KKL A L C+ KG PD+ +N ++
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C G+ DA ++ +M C+PNLV++ TL+ G F+ A K ++ G
Sbjct: 577 HGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQ 636
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
P + +KG C+ ++ +A G L + + G P TW ++V +
Sbjct: 637 PDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAV 684
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 1/296 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +L+ L + Y + IL ++ + ++ +I D M
Sbjct: 396 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ CKP P N ++ V + L A F + G P +YN ++
Sbjct: 456 TKHGCKPNPHVCNAVINGFV-RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
S AY L +M +G P++ +Y +LM GLC+ +++ A++L L KGF PD +
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ LC K+ +A +L MK + C P++V +NT++ GF + A K+ + + G
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 634
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P+++SY + GLC A ++ + +G P + L++ + G +
Sbjct: 635 PQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 2/244 (0%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++A+ N A +F +M E G P + SY L+ L ++ + A
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ +Y L+ CRKK+ +A +LL M +G +PD+ Y T++ + G DA
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQG-MFDVAKKYMQLMISKGFSPHFSVSHALIK 384
K+ ++MP G P++ Y L+ G +G + + ++ + +L+ P+ + +I
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C GK DE+ + + K T+ ++ +C ++ V E+ + +
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323
Query: 445 DTRI 448
D +
Sbjct: 324 DVVV 327
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVH 308
+ V+R V+L+ K P+ ++ T++ + + +A + RM ++ GC P I
Sbjct: 60 AHVSRIVELIRT--QKCKCPEDVA-LTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRS 116
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN+++ + +A + G PNL +Y L+ C + FD AK+ + M
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+GFSP LI G + +A + +E+ + G P + +++ +
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI------DGFF 230
Query: 429 KLGEVLN--EIVKVEIKG 444
K G++LN EI + +KG
Sbjct: 231 KKGDILNASEIWERLLKG 248
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 175/348 (50%), Gaps = 3/348 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP RV KL+ S+ +P A IFD +R P + H+ + ++ +L K + + I+
Sbjct: 9 SPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVEL 68
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
++++ + +IK YA++++PD+AL F+ M E F C+P + N +L L+
Sbjct: 69 IRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI-ES 127
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N A F G+ PN ++YNI+++ C A L N M+E+G PDV SY
Sbjct: 128 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSY 187
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR-MK 298
L+ L + ++ A+ L ++M +G PD Y L++ +K + A ++ R +K
Sbjct: 188 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P+I YN ++ G C+ G+ ++ ++ M N +L +Y TL+ GLC G D
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A + + M G SP V + ++ G+ G+++E + + + K G
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 12/371 (3%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D L A EI++ + P+ + +Y ++I L + F +I +K
Sbjct: 232 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-----F 186
++ LI S D A + ++ M E P N +L YLR
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTML------NGYLRAGRIEECL 345
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L+K K G SYNI++R N + A +++ + E+ D +Y +L+ GL
Sbjct: 346 ELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +N+A+ +LE+ N DT +Y++++N LCR+ +L E +L +M GC P+
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N V+ GF R + DA + +M S GC P +V+Y TL+ GL F A ++
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ KG+ P+ L+ G C K+D A + + L+ G P +I+ +C+ +
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 427 MEKLGEVLNEI 437
+E ++ +E+
Sbjct: 585 VEDALQLYSEM 595
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
KHG PN N ++ F + A F M +G P V +Y L+ GL + + +
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L+++ML+KG+ P+ ++Y+ L+N LC+ KKL A L C+ KG PD+ +N ++
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
G C G+ DA ++ +M C+PNLV++ TL+ G F+ A K
Sbjct: 577 HGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 131/267 (49%), Gaps = 1/267 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++K ++GV P+ YN M+ + G I L+ M + G V SY I
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNI 364
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GL ++V+ A+ + E + K D+++Y L++ LC+ L +A +L +
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D Y++++ G CREGR + VL+ M +GC PN ++ G + A
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M+SKG P + LI G + EA +++E+L G P+ T+ +++ +
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRI 448
C G++++ + + ++ K D ++
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKM 571
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 11/278 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI+ E+ D A+ + + E +C ++ L + YL A + + A
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN-GYLNKALSILEEA 420
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+T +Y+ M+ C G + + ++M + G P+ ++ G R S++
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ +M++KG P ++Y TL+N L + ++ EAY L+ M KG P+++ Y+ +
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540
Query: 313 VLGFCREGRAID-----ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ G C +G+ +D C+ LE G P++ + ++ GLC G + A + M
Sbjct: 541 MNGLC-QGKKLDMALNLWCQALE----KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ P+ + L++GF V + A + + +L++
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVH 308
+ V+R V+L+ K P+ ++ T++ + + +A + RM ++ GC P I
Sbjct: 60 AHVSRIVELIRTQKCK--CPEDVA-LTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRS 116
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN+++ + +A + G PNL +Y L+ C + FD AK+ + M
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+GFSP LI G + +A + +E+ + G P + +++ +
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI------DGFF 230
Query: 429 KLGEVLN--EIVKVEIKG 444
K G++LN EI + +KG
Sbjct: 231 KKGDILNASEIWERLLKG 248
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 189/406 (46%), Gaps = 35/406 (8%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
V K + +S LA F + F+H+ T+ ++I KL + +L +K +
Sbjct: 45 VLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 104
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ + LF +I +Y + L +RA++ F + EF C P K N +L+ L+ N ++
Sbjct: 105 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE-NRIQM 163
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD--------- 235
+ +++ + G PN +YN++++A C N + A L +M +G P+
Sbjct: 164 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVIS 223
Query: 236 ---------------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
V Y L+ GLC++ V+L+ +M+ KG P+ +SY
Sbjct: 224 SMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISY 283
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+TL+N L ++ A+ LL +M +GC+P+I +++V G G DA + M
Sbjct: 284 STLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIR 343
Query: 335 N-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+V+Y TLV G C G D A M G SP+ +LI GF G ++
Sbjct: 344 GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE 403
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAG---EEMEKLGEVLNE 436
A + ++L +G P+ + +V +C +E E L E++++
Sbjct: 404 GAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSK 449
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 151/312 (48%), Gaps = 5/312 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ +Y LI + S + A ML+ C P L+ +++ R A
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV-RGTTFDA 334
Query: 186 FDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
D++ + G+ PN +YN +++ FC +G+I A ++F M E G P++ +Y L+
Sbjct: 335 LDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLIN 394
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G ++ + AV + ML G P+ + YT+++ +LCR K +EA L+ M + C P
Sbjct: 395 GFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAP 454
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+ +N + G C GR A KV M C PN+V+Y L+ GL + A
Sbjct: 455 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGL 514
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ + +G S + L+ G CN G A ++ +++ G++P E T MI+ C
Sbjct: 515 TREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCK 574
Query: 424 GEEMEKLGEVLN 435
+ E+ ++L+
Sbjct: 575 QGKAERAVQMLD 586
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 14/293 (4%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN N+ L G + ++ + + L E +P++ TY LI + +
Sbjct: 348 QPNVVAYNT------LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGS 401
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+ A+ + ML C P ++E L H + + A L + K P+ ++N
Sbjct: 402 LEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKF-KEAESLIEIMSKENCAPSVPTFN 460
Query: 206 IMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ C G + A +F +M ++ P++ +Y L+ GL + +++ A L ++
Sbjct: 461 AFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 520
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G T +Y TLL+ C A +L+ +M V G +PD + N ++L +C++G+A
Sbjct: 521 RGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAER 580
Query: 325 ACKVLEDMPSNG---CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
A ++L D+ S G P+++SY ++ GLC + + MIS+ P
Sbjct: 581 AVQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 121/256 (47%), Gaps = 6/256 (2%)
Query: 185 AFDLFKSAHKHGVLPNTK-SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A FKS + +T ++ +M+R +G + L +M +G + + ++
Sbjct: 58 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 117
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ RAV++ + G P Y +L++L + +++ Y + MK G
Sbjct: 118 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 177
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ YN ++ C+ + A K+L +M + GC PN VSY T++ +C+ GM ++
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQ- 236
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+++ F P SV +ALI G C ++ E+++ G +P+ ++ ++ ++
Sbjct: 237 ----LAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSN 292
Query: 424 GEEMEKLGEVLNEIVK 439
++E +L +++K
Sbjct: 293 SGQIELAFSLLAQMLK 308
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + P++ Y L++ + D+A+ F M E C P + ++ T R L
Sbjct: 345 FGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGF-TKRGSLE 403
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A ++ G PN Y M+ A C + A +L M + P V ++ +
Sbjct: 404 GAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 463
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVP-DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+GLC +++ A + M + P + ++Y LL+ L + ++ EAY L + ++G
Sbjct: 464 KGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 523
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
YNT++ G C G A +++ M NG P+ ++ ++ C QG + A +
Sbjct: 524 EWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQ 583
Query: 363 YMQLMIS--KGFSPHFSVSHALIKGFC 387
+ L+ + + P +I G C
Sbjct: 584 MLDLVSCGRRKWRPDVISYTNVIWGLC 610
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 35/248 (14%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
Y ++ L R F + ++ + E+ + F IK ++ D A K FR M
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482
Query: 157 -LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
++ C P N +L+ L N + A+ L + GV +T +YN ++ C G
Sbjct: 483 EQQYRCPPNIVTYNELLDGL-AKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAG 541
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
IA L KM G PD + +++ C++ + RAV +L D +S
Sbjct: 542 LPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML----------DLVS-- 589
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
C ++K R PD++ Y V+ G CR D + E M S
Sbjct: 590 ------CGRRKWR---------------PDVISYTNVIWGLCRSNCREDGVILFERMISE 628
Query: 336 GCLPNLVS 343
+P L S
Sbjct: 629 RIIPILRS 636
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 49/374 (13%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+ + +++ + ++ LI + F+ ++ +L +K E+ F + K Y +++
Sbjct: 55 SHKWGSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAH 114
Query: 145 LPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH-------- 195
LP +AL F M EF+CK K N +L +++ FDL + H
Sbjct: 115 LPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQ-----EGCFDLALEFYNHVIDSNSFS 169
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ PN S+N++++A C G++ A +F M +R + D +Y LM GLC + +++ A
Sbjct: 170 NIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEA 229
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
V LL++M +G P+ +++ L+++LC+K L A KL+ M +KGC P+ V YN++V G
Sbjct: 230 VSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHG 289
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ--------------------- 354
C +G+ A +L M +N C+PN +++ TLV G
Sbjct: 290 LCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGN 349
Query: 355 ---------GMFDVAK--KYMQL---MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
G+F K MQL M+ KG P+ V ALI G C GK DEA L
Sbjct: 350 EFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLI 409
Query: 401 ELLKAGEAPHEDTW 414
E+ G P+ T+
Sbjct: 410 EMKNKGHTPNSFTY 423
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 36/369 (9%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +IK D+A++ FR M + NC + ++ L + + A L
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC-NEGRIDEAVSLLDEM 236
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN ++N+++ A C GD+S A L + MF +G +P+ +Y L+ GLC K ++
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 296
Query: 253 NRAVDLLEDML-----------------------------------NKGFVPDTLSYTTL 277
++A+ LL M+ KG+ + SY++L
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSL 356
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ L ++ K +L M KGC P+ + Y+ ++ G CREG+ +A + L +M + G
Sbjct: 357 ISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 416
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
PN +Y +L+ G + G A + M + H LI G C GK+ EA
Sbjct: 417 TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALI 476
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
V +++L G + ++ C + +E+ ++ N+++ K +V I L
Sbjct: 477 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNA 536
Query: 458 YLIGKTRSR 466
+ + SR
Sbjct: 537 FCTKNSVSR 545
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 131/334 (39%), Gaps = 59/334 (17%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+A+ M+ C P +++ V H L + S + G N SY+
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL-DGVRVLVSLEEKGYRGNEFSYSS 355
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ G L+ +M E+G P+ Y L+ GLCR+ + + A + L +M NKG
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKG 415
Query: 267 FVPDTLSYTTLL-----------------------------------NSLCRKKKLREAY 291
P++ +Y++L+ N LC+ KL+EA
Sbjct: 416 HTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEAL 475
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG--CLPNLVSYRTLVG 349
+ +M +G D+V Y++++ GFC K+ M + P++V+Y L+
Sbjct: 476 IVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLN 535
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV------GK--VDE------- 394
C + A + M+ +G P F +K + G+ +DE
Sbjct: 536 AFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIK 595
Query: 395 ------ACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A ++E +L+ P TW + V Q+C
Sbjct: 596 RQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLC 629
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+ LI +K++ + TP+ FTY L+ Y E+ +A+ ++ M + +C + ++
Sbjct: 406 EYLIEMKNKGH--TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILIN 463
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-- 231
L + L+ A ++K G+ + +Y+ M+ FC + LFN+M
Sbjct: 464 GLCKN-GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK 522
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ PDV +Y IL+ C K+ V+RA+D+L ML++G PD ++ L +L
Sbjct: 523 LQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 4/340 (1%)
Query: 110 YFSLIDDILITLK---SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+F+ +DD L + H P + FT L+ A+ L M F P
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 186
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
LN ++ H L AF + K G P+ ++N ++R C G I A LF+K
Sbjct: 187 TLNILINSFC-HLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 245
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
G PDV +Y LM GLC+ + A+ LL M+ K P+ ++Y T+++SLC+ ++
Sbjct: 246 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 305
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA+ L M KG +PDI YN+++ C +L +M ++ +PN+V + T
Sbjct: 306 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V LC +GM +A + +MI +G P AL+ G C ++DEA V + ++ G
Sbjct: 366 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 425
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ ++ +++ C + M+K +L ++ + DT
Sbjct: 426 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 465
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 148/309 (47%), Gaps = 36/309 (11%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ RSM++ NC+P N I++ L R + AF+LF G+ P+ +YN ++
Sbjct: 274 AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ-VTEAFNLFSEMITKGISPDIFTYNSLI 332
Query: 209 RAFCF-----------------------------------NGDISIAYTLFNKMFERGVM 233
A C G I+IA+ + + M +RGV
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV +Y LM G C +S+++ AV + + M++KG VP+ SY L+N C+ +++ +A L
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L +M ++G D V YNT++ G C GR A + +M ++G +P+LV+YR L+ LC
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A ++ + V + I G C G+++ A + L G P T
Sbjct: 513 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 572
Query: 414 WVMIVPQIC 422
+ +++ +C
Sbjct: 573 YNIMIHGLC 581
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 135/270 (50%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L +S + PN +YN ++ + C + ++ A+ LF++M +G+ PD+ +Y L+
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC + LL +M+N +P+ + ++T++++LC++ + A+ ++ M +G
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+V Y ++ G C +A KV + M GC+PN+ SY L+ G C D A
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ M +G + LI G C+VG++ A + E++ +G+ P T+ +++ +C
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ + +L I + D + I
Sbjct: 513 NHHLAEAMVLLKAIEGSNLDADILVYNIAI 542
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R+ + A +F + G +PN +SYNI++ +C + A L +M +G++ D +
Sbjct: 408 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 467
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC ++ A+ L +M+ G +PD ++Y LL+ LC+ L EA LL ++
Sbjct: 468 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 527
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ DI+ YN + G CR G A + ++ S G P++ +Y ++ GLC +G+ D
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLD 587
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K + M G S + + +I+GF + A +L+E+L G + T +IV
Sbjct: 588 EANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIV 647
Query: 419 PQI 421
+
Sbjct: 648 EML 650
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 38/266 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ + + D A+K F +M+ C P + N IL + A
Sbjct: 391 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN-ILINGYCQIQRMDKA 449
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ- 244
L + G++ +T +YN ++ C G + A LF++M G +PD+ +YRIL+
Sbjct: 450 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 509
Query: 245 ----------------------------------GLCRKSQVNRAVDLLEDMLNKGFVPD 270
G+CR ++ A DL ++ +KG PD
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+Y +++ LC++ L EA KL +M GC+ D YNT++ GF R A ++L+
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQ 629
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGM 356
+M + G ++ + +V L D G+
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDGL 655
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 39/372 (10%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-K 122
R+ LI Q A + F++AS+ PNF HS STY LI KL + F + +L + K
Sbjct: 17 RIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPK 76
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH---- 178
S P S+F +I+ + + +K + + P K N IL++LV
Sbjct: 77 SIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKEDIDL 136
Query: 179 ------------------------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
N + F L + G+ PN YN ++
Sbjct: 137 ARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLL 196
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A C NG + A +L N++ E P+ ++ +L+ G C++ +A+ LLE + GFV
Sbjct: 197 HALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFV 252
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++ T ++ LC ++ EA ++L R++ KG D+V +NT++ GFC+ G+ +
Sbjct: 253 PDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGL 312
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L++M GCLPN +Y L+ G C+ GM + A M + G + +F LIKG +
Sbjct: 313 LKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFS 372
Query: 389 VGKVDEACGVLE 400
G+ ++ +LE
Sbjct: 373 RGRTEDGFKILE 384
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 4/263 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K + G LPN +YN ++ FC +G + A +FN M G+ + ++ L++GL
Sbjct: 312 LLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLF 371
Query: 248 RKSQVNRAVDLLEDML-NKGFVPDTLS-YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + +LE M +G ++S Y ++L L RK L EA + L MK++ P
Sbjct: 372 SRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFL--MKMENLFPR 429
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V + +LGFC EG +A +V + M + G +P+ + Y L+ G C +G A + M
Sbjct: 430 AVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMN 489
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ G+ P S +ALI GFC +GK A +LE+++ G P ++ ++ +C +
Sbjct: 490 EMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKK 549
Query: 426 EMEKLGEVLNEIVKVEIKGDTRI 448
+K +L ++V+ I D I
Sbjct: 550 SFQKAASLLLQMVENGITPDYLI 572
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 2/176 (1%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+N L A + + P ++ + FC G I A ++++M G +P
Sbjct: 410 KNMLNEALEFLMKMEN--LFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALV 467
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G C++ V A++L+ +M+ G+ P ++ L++ CR K A KLL M
Sbjct: 468 YDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMV 527
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+GC PD Y+ ++ CR+ A +L M NG P+ + + +L L Q
Sbjct: 528 GRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQ 583
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDA 325
F +Y L++ L ++ LL M K G PD + T++ G R D
Sbjct: 44 FTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDV 103
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSVSHALIK 384
KVL+ + G P+L + +++ L + + D+A+K Y + M+ G L+K
Sbjct: 104 IKVLDLVTRYGKNPSLKIFNSILDVLVKEDI-DLARKFYRKKMMGAGIQGDDYTYGILMK 162
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G C ++ E +L+ + G P+ + ++ +C ++ + ++NEI
Sbjct: 163 GLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEI 215
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 20/365 (5%)
Query: 65 VQKLIASQSDPLLAKEIFD-----YASRQPN-FRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ +L+ ++ DP A IFD ++ P+ S +T +L +L A + L +L
Sbjct: 20 LHRLVRAERDPRRALAIFDGATAAASTSAPDPITPSLATVSLLTSRLASAGHLPLATSLL 79
Query: 119 ITLKSEHYPVTPSL------FTYLIKIYAESNLPDRALKTFRSMLEFNCKPL-PKQLNRI 171
S V PS+ F L++ ++ ++ P AL FRS P + N +
Sbjct: 80 ----SRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAV 135
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L LV H ++L A L G P +YN++++A C + I L ++F
Sbjct: 136 LAALVAH-SHLPLARSLLADMRAAGFAPTAATYNVLLKAHCSDAAAHIEDAL--RLFRNI 192
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
PDV SY ++ GLCR+ ++ A+D+ +M+ K P ++YTT+++ L R+ +A
Sbjct: 193 PKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDAL 252
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
K+ M +G +P++V Y++++ G C+ GRA A ++L+ M LPN+++Y +++ GL
Sbjct: 253 KIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGL 312
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + M A + + M +G P + LI G C+ G+ EA L+E++ AG P+
Sbjct: 313 CKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNR 372
Query: 412 DTWVM 416
TW +
Sbjct: 373 VTWSL 377
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 149/329 (45%), Gaps = 22/329 (6%)
Query: 127 PVTPSLFTYLI---KIYAESNLP------DRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
P+TPSL T + ++ + +LP R+ F S+ P L + T
Sbjct: 51 PITPSLATVSLLTSRLASAGHLPLATSLLSRSRGVFPSVAALE----PPFLGLLRAFSRT 106
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNT-KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
HR A LF+SA LP++ +SYN ++ A + + +A +L M G P
Sbjct: 107 HRPL--AALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTA 164
Query: 237 ESYRILMQGLCR--KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+Y +L++ C + + A+ L ++ PD SY T+++ LCR+ +L EA +
Sbjct: 165 ATYNVLLKAHCSDAAAHIEDALRLFRNIPK----PDVCSYNTIIDGLCRRGRLAEALDMF 220
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M K P +V Y TV+ REG DA K+ +M G PNLV+Y +L+ GLC
Sbjct: 221 SEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKG 280
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + + MI + P+ ++I G C + EA +L+ + G P +
Sbjct: 281 GRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLF 340
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ +C + L+E+V I+
Sbjct: 341 GKLIVGLCDAGRAVEAANYLDEMVLAGIE 369
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 153/360 (42%), Gaps = 42/360 (11%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A +F A HS +Y ++ L + L +L +++ + T + +
Sbjct: 109 PLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYN 168
Query: 135 YLIKIY---AESNLPDRALKTFR-----------SMLEFNCKP--LPKQLNRILELL--- 175
L+K + A +++ D AL+ FR ++++ C+ L + L+ E++
Sbjct: 169 VLLKAHCSDAAAHIED-ALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKC 227
Query: 176 -----VTHRNYLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
VT+ + A +F + GV PN +Y+ ++ C G + A
Sbjct: 228 IAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSAL 287
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M + +P++ +Y ++ GLC++ ++ A+++L+ M +G PD + L+ L
Sbjct: 288 ELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGL 347
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHY-------NTVVLGFCREGRAIDACKVLEDMPS 334
C + EA L M + G P+ V + NTV+ C +G A +V + +
Sbjct: 348 CDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRT 407
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+ ++ LV + A+ + M+S+ P +I G+ + KV +
Sbjct: 408 RSISTDPTTFHLLVESFSKNNIEKAARVVLD-MLSERCIPERETWDVIISGYWSKKKVRQ 466
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 196 GVLPNTKSY-------NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G+ PN ++ N ++ A C G++ A+ ++ R + D ++ +L++
Sbjct: 367 GIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFS- 425
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
K+ + +A ++ DML++ +P+ ++ +++ KKK+R+ K
Sbjct: 426 KNNIEKAARVVLDMLSERCIPERETWDVIISGYWSKKKVRQEAK 469
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 193/438 (44%), Gaps = 55/438 (12%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF---------------- 111
L+ QSD + A F + + S Y L+ L +K F
Sbjct: 98 LLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKD 157
Query: 112 -SLIDDILITLK--SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
S +D+ TL + P +F L+K Y + TFR ++E C P
Sbjct: 158 CSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISC 217
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +L L+ N + + ++K + G+ PN+ ++NI+ FC +GD+ +M
Sbjct: 218 NCLLNGLLK-LNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERME 276
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E G PD+ +Y L+ CRK +++ A L M + +PD +SYT L+N LC++ K+R
Sbjct: 277 EEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVR 336
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA++L RM +G NPDIV +NT++ G+C+EG+ ++ +L +M +G P+ V+ + L+
Sbjct: 337 EAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396
Query: 349 GG-----------------------------------LCDQGMFDVAKKYMQLMISKGFS 373
G +C++G AK +Q + +G+
Sbjct: 397 EGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYV 456
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + + LI+ C + +A V E+ P T+ ++ +C + +
Sbjct: 457 PGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESL 516
Query: 434 LNEIVKVEIKGDTRIVEA 451
+ E+++ + D I A
Sbjct: 517 MEEMLQSGMLPDPDICRA 534
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L ++ + D+ M E +P N ++ + L AF L++
Sbjct: 252 FNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISC-YCRKGRLDDAFYLYRIM 310
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++ VLP+ SY +M C G + A+ LF++M RG+ PD+ S+ L+ G C++ ++
Sbjct: 311 YRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKM 370
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ LL +M+ G PD ++ L+ ++ ++ A L+ ++ G Y+ +
Sbjct: 371 RESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYL 430
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
++ C EGR A +L+ + G +P + Y L+ LC A M +
Sbjct: 431 MVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNI 490
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P ALI C + EA ++EE+L++G P D ++ C ++ K
Sbjct: 491 KPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAET 550
Query: 433 VLNEIVK 439
+L K
Sbjct: 551 LLQTFAK 557
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 144/384 (37%), Gaps = 82/384 (21%)
Query: 93 HSNS-TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
H NS T+ IL + ++D L ++ E + P + TY LI Y D A
Sbjct: 246 HPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFE--PDIVTYNTLISCYCRKGRLDDA 303
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+R M N P ++ L +R A LF G+ P+ S+N ++
Sbjct: 304 FYLYRIMYRRNVLPDLVSYTALMNGLCKE-GKVREAHQLFHRMIHRGLNPDIVSFNTLIC 362
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPD-------VESYR---------------------- 240
+C G + + +L ++M G+ PD +E YR
Sbjct: 363 GYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPI 422
Query: 241 ------ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LM +C + + A LL+ + +G+VP Y L+ SLC+ + +A +
Sbjct: 423 STDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVK 482
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN-------------- 340
M + P + Y ++ CR R+++A ++E+M +G LP+
Sbjct: 483 SEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKE 542
Query: 341 ---------------------LVSYRTLVGGLCDQGMFDVAKKYMQL---MISKGFSPHF 376
SY TLV C+ A + M+L M+ GF+P+
Sbjct: 543 RDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDA---DATRLMELQDRMLKVGFAPNI 599
Query: 377 SVSHALIKGFCNVGKVDEACGVLE 400
+I G V++ +LE
Sbjct: 600 QTFRQMIHGLWKAMAVEKDKLLLE 623
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
I + P AK + S Q + Y LI L ++ S+ D +L+ + H +
Sbjct: 434 ICEEGRPFAAKSLLQRIS-QRGYVPGVEIYNKLIESLCKSD--SIADALLVKSEMGHRNI 490
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PS TY LI ++ A ML+ P P ++ + R+ + A
Sbjct: 491 KPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERD-IGKAE 549
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L ++ K + +++SYN +++ +C + D + L ++M + G P+++++R ++ GL
Sbjct: 550 TLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGL 609
Query: 247 CRKSQVNRAVDLLE 260
+ V + LLE
Sbjct: 610 WKAMAVEKDKLLLE 623
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 195/400 (48%), Gaps = 26/400 (6%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQ----PN-FRHSNSTYLILILKLGRAKYFSLIDDILI 119
+ +L+ ++ DP A IFD A+ P+ S +T +L +L A + L +L
Sbjct: 20 LHRLVRAERDPRRALAIFDAATAASTSAPDPITPSPATVSLLTSRLASAGHLPLATSLL- 78
Query: 120 TLKSEHYPVTPSL------FTYLIKIYAESNLPDRALKTFRSMLEFNCKP-LPKQLNRIL 172
S V PS+ F L++ ++ ++ P AL FRS P + N +L
Sbjct: 79 ---SRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVL 135
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
LV H ++L A L G P +YN++++A C + I L ++F
Sbjct: 136 AALVAH-SHLPLARSLLADMRAAGFAPTAATYNVLLKAQCSDAAADIKDAL--RLFRNIP 192
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV SY ++ GLCR+ ++ A+++ +M+ K P ++YTTL++ L R+ +A K
Sbjct: 193 KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALK 252
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ M +G +P++V Y++++ G C+ GRA A ++++ M LPN ++Y +++ GLC
Sbjct: 253 IFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLC 312
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+ M A + + M +G P + LI G C+ G+ EA L+E++ AG P+
Sbjct: 313 KEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMILAGIEPNRV 372
Query: 413 TWVM-------IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
TW + ++ +CA E+ + +V I D
Sbjct: 373 TWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTD 412
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 176/354 (49%), Gaps = 16/354 (4%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A +F A HS +Y ++ L + L +L +++ + T + +
Sbjct: 108 PLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYN 167
Query: 135 YLIKIY---AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+K A +++ D AL+ FR++ KP N I++ L R L A ++F
Sbjct: 168 VLLKAQCSDAAADIKD-ALRLFRNI----PKPDVCSYNTIIDGLC-RRGRLAAALEMFSE 221
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ P +Y ++ G A +F++M RGV P++ +Y L+ GLC+ +
Sbjct: 222 MVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGR 281
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++L++ M+ + +P+T++Y+++++ LC++ L EA ++L RM+++G PD +
Sbjct: 282 AASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGK 341
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY-------RTLVGGLCDQGMFDVAKKYM 364
+++G C GRA++A L++M G PN V++ T++ LC +G A +
Sbjct: 342 LIVGLCDAGRAVEAANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVY 401
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
Q ++ S + H L++ F +++A V+ ++L P +TW +I+
Sbjct: 402 QSTRTRSISTDPTTFHLLVESFSKKKNMEKAAHVVLDMLSERCIPERETWDVII 455
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 12/229 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L R F D + I + V+P+L TY LI + AL+
Sbjct: 233 TYTTLIHWLAREGCFD--DALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMD 290
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ P + +++ L + L A ++ G P+ + ++ C
Sbjct: 291 RMIKEKKLPNTITYSSVIDGLCKE-HMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDA 349
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRI-------LMQGLCRKSQVNRAVDLLEDMLNKGF 267
G A ++M G+ P+ ++ + ++ LC K ++ RA + + +
Sbjct: 350 GRAVEAANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSI 409
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
D ++ L+ S +KK + +A ++ M + C P+ ++ ++ G+
Sbjct: 410 STDPTTFHLLVESFSKKKNMEKAAHVVLDMLSERCIPERETWDVIISGY 458
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 196 GVLPN-------TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G+ PN T+ N ++ A C G++ A+ ++ R + D ++ +L++ +
Sbjct: 366 GIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSK 425
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
K + +A ++ DML++ +P+ ++ +++ KKK
Sbjct: 426 KKNMEKAAHVVLDMLSERCIPERETWDVIISGYWSKKK 463
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 36/325 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR-------- 179
PSL TY +IK + AL+ + M E CKP N +++ L R
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 180 --------------------------NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
L A LFK V+PNT ++ I++ C
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G I A +F M E GV PD +Y LM G C +SQ++ A L + M+ KGF P
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+N C+ ++L EA LL M + PD V Y+T++ GFC+ GR A K+ ++M
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
S G LP+ ++Y L+ GLC G D A + ++ M PH + + LI+G CN GK++
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 394 EACGVLEELLKAGEAPHEDTWVMIV 418
A + L G P T+ +++
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMI 498
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 140/270 (51%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
++R+++ AF K G+ P ++ ++ C I A LF+++ + G P +
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y +++GLC+ A+ LL+ M KG PD ++Y T+++SLC+ ++ EA
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M +G P++V Y++++ GFC G+ +A + + M +PN V++ LV GLC +GM
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A++ ++M G P AL+ G+C ++DEA + + ++ G AP + +
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ C + + +L+E+ ++ DT
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 5/299 (1%)
Query: 128 VTPSLFTYLIKI----YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ P+++T I I ++ + A M + +P +L L + +
Sbjct: 100 IRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII- 158
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF K G P+ +Y +++ C G + A L KM E+G PDV +Y ++
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ + N A+ +M+++G P+ ++Y+++L+ C +L EA L +M +
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P+ V + +V G C+EG ++A +V E M NG P+ +Y L+ G C Q D A+K
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+M+ KGF+P V + LI G C +++EA +L E+ P T+ ++ C
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFC 397
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 160/343 (46%), Gaps = 5/343 (1%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY ++ NL + A F+ M+ N P +++ L L A
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILE-A 300
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ ++GV P+ +Y+ +M +C + A LF+ M +G P V Y IL+ G
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++N A LL +M ++ PDT++Y+TL+ C+ + + A KL M G PD
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+ ++ G C+ G +A ++L+ M + P++ Y L+ G+C+ G + A++
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFS 480
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ KG P +I G G +EAC + +++ G P+ T+ + +
Sbjct: 481 NLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE--DYLIGKTRSR 466
+ ++ E+V D+ + + LE D +I + R
Sbjct: 541 DPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMRR 583
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 2/227 (0%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR--KSQVNRA 255
LP +N ++ + S +L +M + P+V + IL+ LC + V+ A
Sbjct: 66 LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L M G P +++ TLLN LC K K+ +A KL + G P ++ Y T++ G
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ G +A ++L+ M GC P++V+Y T++ LC + A + M+ +G P+
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+++ GFCN+G+++EA + ++++ P+ T+ ++V +C
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC 292
>gi|356514549|ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Glycine max]
Length = 465
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 198/430 (46%), Gaps = 50/430 (11%)
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIF------DYASRQPNFRHSNSTYLILILKL 105
+S SK PI SP R+ L+ S DP LA ++F + +P RHS +Y +LI KL
Sbjct: 1 MSTSK-PI-SPFRLTSLLRSTKDPSLALQLFLNPNPNPNPNPRP-LRHSLRSYDLLITKL 57
Query: 106 GRAKYFSLIDDILITLKS-EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
RAK F ++ IL L++ +PV L +I YA + LP RAL+TF S+ F C P
Sbjct: 58 ARAKMFPQMEQILHQLQTLTQFPVPEPLLCRVIISYARARLPSRALRTFLSIPSFRCTPT 117
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF-NGDISIAYTL 223
K N +L L+ R++ L + H P+ +YNI++RA N D++ A L
Sbjct: 118 LKSFNSLLHALLLCRDFPSLPRLLPRLRHFSASGPDACTYNILIRACSLNNNDLAHARKL 177
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNR----------------------------- 254
F++M GV P ++ L+ LC+ +N
Sbjct: 178 FDEMLTLGVRPTQVTFGTLINMLCKDPHLNLREAFSVKEDMERVFKLKPNVFVYTNLIKA 237
Query: 255 ---------AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
A L ++M+ D + Y TL +++ + K Y++L MK G PD
Sbjct: 238 VCEVGDFDCAFRLKDEMVRNNLRLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSGGVKPD 297
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V N ++ FCREG ++A +VL+D G P++ Y ++G LC +G + A +
Sbjct: 298 AVTCNVLIGEFCREGNLVEAYRVLDD-GVEGVKPDVFGYNVVIGWLCKEGKWREADDLFR 356
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M + P + G C + +EA VLEE++ G P + V ++C
Sbjct: 357 DMPRRQCVPDVVTYRTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSLNEFVGRLCQEG 416
Query: 426 EMEKLGEVLN 435
+ E LG+VL+
Sbjct: 417 DFELLGKVLS 426
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 179/386 (46%), Gaps = 26/386 (6%)
Query: 74 DPLLAKEIFDYASRQ------------PNFRHSNS--TYLILILKLGRAKYFSLIDDILI 119
+PLL + I YA + P+FR + + ++ L+ L + F + +L
Sbjct: 83 EPLLCRVIISYARARLPSRALRTFLSIPSFRCTPTLKSFNSLLHALLLCRDFPSLPRLLP 142
Query: 120 TLKSEHYPVT-PSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
L+ H+ + P TY I I A +N A K F ML +P ++ +L
Sbjct: 143 RLR--HFSASGPDACTYNILIRACSLNNNDLAHARKLFDEMLTLGVRPTQVTFGTLINML 200
Query: 176 VT--HRNYLRPAFDLFKSAHKHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
H N LR AF + + + L PN Y +++A C GD A+ L ++M +
Sbjct: 201 CKDPHLN-LREAFSVKEDMERVFKLKPNVFVYTNLIKAVCEVGDFDCAFRLKDEMVRNNL 259
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
DV Y L + + + +LE+M + G PD ++ L+ CR+ L EAY+
Sbjct: 260 RLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSGGVKPDAVTCNVLIGEFCREGNLVEAYR 319
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+L V+G PD+ YN V+ C+EG+ +A + DMP C+P++V+YRT+ GLC
Sbjct: 320 VL-DDGVEGVKPDVFGYNVVIGWLCKEGKWREADDLFRDMPRRQCVPDVVTYRTVFDGLC 378
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
F+ A ++ M+ KG+ P S + + C G E G + L G +E+
Sbjct: 379 QWMQFEEAGLVLEEMVFKGYVPCSSSLNEFVGRLCQEGDF-ELLGKVLSGLGGGFFCNEN 437
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIV 438
W +V +C E++ E+L+ +V
Sbjct: 438 VWKTVVSLVCKSEKLSGAFELLDALV 463
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 171/342 (50%), Gaps = 12/342 (3%)
Query: 96 STYLILILKLGRAK-YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
+T + + K GR + +L DD+ I H+ P++ TY LI + D+ K
Sbjct: 69 NTMIDGLCKCGRIENALTLYDDMAI-----HFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M C P N ++ L+ + AF L + +G P ++ ++++ C
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQ-GRSKEAFSLLEQMAANGCPPELITFGLIIKGLC 182
Query: 213 FNGDISIAYTLFNKMF--ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G+I A+ + ++MF E G+ PDV ++ ++ GLC++ ++ A ++ + L +G P+
Sbjct: 183 KEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 242
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+TL++ L + K+ EA +LL +M GC + V Y+TVV G + GR DA VL
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M GCLP+ V+Y TL+ G + A ++ M+ GF P L G C G
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLG 431
+ DEA +L+ + G AP+ T+ IV +C AG E LG
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 404
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 13/333 (3%)
Query: 96 STYLILILKLGRAK-YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
+T + +L GR+K FSL++ + + P P L T+ +IK + + A +
Sbjct: 140 NTLVNALLGQGRSKEAFSLLE----QMAANGCP--PELITFGLIIKGLCKEGEIEAAFRV 193
Query: 153 FRSM--LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
M +E P N +L+ L + L A ++FK A + G PN +Y+ ++
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRIL-DAHNVFKRALERGCRPNVVTYSTLIDG 252
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+ A L KM E G + +Y ++ GL + ++ AV +L M + G +PD
Sbjct: 253 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 312
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y TL++ ++++LREA LL M G +P +V Y T+ G CR GR +A ++L+
Sbjct: 313 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI-SKGFSPHFSVSHALIKGFCNV 389
M + GC PN ++Y ++V GLC G A Y + M + +PH ALI G C
Sbjct: 373 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 432
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
GK+DEA LE +++AG P T+ +++ +C
Sbjct: 433 GKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 163/328 (49%), Gaps = 4/328 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F ++D++ + ++S P + + L + E + D A F+ LE C+P +
Sbjct: 191 FRVVDEMFM-IESGLSPDVITFNSVLDGLCKEQRILD-AHNVFKRALERGCRPNVVTYST 248
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ L + + A L + G NT +Y+ ++ G + A + +M +
Sbjct: 249 LIDGL-SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G +PD +Y L+ G ++ ++ AV LL +ML GF P ++YTTL + LCR + EA
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVG 349
++L M +GC P+ + Y+++V G C+ GR +A E M + + P++++Y L+
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 427
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC G D A ++++ MI G P LI G C+ G++D + + + G P
Sbjct: 428 GLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVP 487
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
T+ +V ++C +++ ++ ++
Sbjct: 488 DMVTYATLVDRLCRASRVDEAFDLFQQM 515
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 143/265 (53%), Gaps = 3/265 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK + P+ +Y ++ + AY LF + +G P V +Y ++
Sbjct: 14 AITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMID 73
Query: 245 GLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ ++ A+ L +DM ++ GF P ++Y+TL++ LCR ++ + KLL M +GC
Sbjct: 74 GLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCA 133
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P+ V YNT+V +GR+ +A +LE M +NGC P L+++ ++ GLC +G + A +
Sbjct: 134 PNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRV 193
Query: 364 MQ--LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ MI G SP ++++ G C ++ +A V + L+ G P+ T+ ++ +
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 253
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
+M++ ++L ++V++ + +T
Sbjct: 254 SKMAKMDEALQLLAKMVELGCRANT 278
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY I S + D AL+ M+E C+ + +++ L+ + A
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL-KVGRMEDAVV 299
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G LP+ +YN ++ F + A L +M E G P V +Y L GLC
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDI 306
R + + AV++L+ M +G P+ ++Y+++++ LC+ ++ EA +M + + P +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y+ ++ G C+ G+ +A + LE M G +P++V++ L+ GLCD G D + +
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
M +G P L+ C +VDEA + +++ G +P T
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 167/342 (48%), Gaps = 4/342 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+ + D+ +++ T + +I + + AL + M
Sbjct: 32 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 91
Query: 157 -LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+ F +P + +++ L + L + G PN +YN ++ A G
Sbjct: 92 AIHFGFRPTVVTYSTLIDGLCRDHE-VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQG 150
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM--LNKGFVPDTLS 273
A++L +M G P++ ++ ++++GLC++ ++ A ++++M + G PD ++
Sbjct: 151 RSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVIT 210
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ ++L+ LC+++++ +A+ + R +GC P++V Y+T++ G + + +A ++L M
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC N V+Y T+V GL G + A ++ M G P + LI GF ++
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
EA G+L E+L+AG P T+ + +C ++ E+L+
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 372
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 3/219 (1%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ C + + A TLF +M ++ + PDV +Y L+ GL ++ +V A DL E+ KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDA 325
P ++Y T+++ LC+ ++ A L M + G P +V Y+T++ G CR+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
CK+LE+M GC PN V+Y TLV L QG A ++ M + G P +IKG
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 386 FCNVGKVDEACGVLEE--LLKAGEAPHEDTWVMIVPQIC 422
C G+++ A V++E ++++G +P T+ ++ +C
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLC 219
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ R M + C P N +++ R LR A L + + G P+ +Y +
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFF-KRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G A + + M RG P+ +Y ++ GLC+ +V A+ E M V
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 269 -PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P ++Y+ L++ LC+ K+ EAY+ L RM G PD+V ++ ++ G C GR +
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ M GC+P++V+Y TLV LC D A Q M S G SP S +I G
Sbjct: 476 LFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLL 535
Query: 388 NVGKVDEACGVLEE 401
V + ++A + +E
Sbjct: 536 EVNRDEDAKRIQDE 549
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC+ +V++A+ L + M++K PD ++Y L++ L ++++++EAY L + KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVA 360
C+P +V YNT++ G C+ GR +A + +DM + G P +V+Y TL+ GLC D
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K ++ M +G +P+ + L+ G+ EA +LE++ G P T+ +I+
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 421 ICAGEEMEKLGEVLNEIVKVE 441
+C E+E V++E+ +E
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIE 201
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
ST + +LK+GR + D +++ + P TY LI + + A+
Sbjct: 282 STVVDGLLKVGRME-----DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 336
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R MLE P + L + A ++ G PN +Y+ ++ C
Sbjct: 337 REMLEAGFHPSVVTYTTLCHGLCRSGRF-DEAVEILDYMAARGCAPNAITYSSIVDGLCK 395
Query: 214 NGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G ++ A F KM + V P V +Y L+ GLC+ +++ A + LE M+ G +PD +
Sbjct: 396 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVV 455
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+++ L+N LC ++ +L M +GC PD+V Y T+V CR R +A + + M
Sbjct: 456 TFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
S+G P+ + RT++ GL + + AK+
Sbjct: 516 RSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PS+ TY L S D A++ M C P + I++ L
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
K A V P+ +Y+ ++ C G I AY +M G +PDV ++ IL+ GLC
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+++ ++L M +G VPD ++Y TL++ LCR ++ EA+ L +M+ G +PD
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRS 525
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPS 334
T++ G R DA ++ ++ S
Sbjct: 526 TRRTMIHGLLEVNRDEDAKRIQDEENS 552
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 213/476 (44%), Gaps = 60/476 (12%)
Query: 22 FPP-KTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKE 80
FP + P F + S + S QQ ++ +S +P ++ + Q+D A
Sbjct: 16 FPSHQHPPFSFFHKPISNSTLSFASTQQHTATLSSNF---TPAQLLDTLRRQNDETAALR 72
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
+ +AS+QPNFR ++S Y ++ KLG+ F+ + DIL +K + + I Y
Sbjct: 73 LLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSY 132
Query: 141 AESNLPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
A+ L + L M +EF N +L +LV N L+ ++ + G+ P
Sbjct: 133 AKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDG-NKLKLVENVHSTMVSKGIKP 191
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ--------------- 244
+ ++NI+++A C I A + +M G++PD +++ LMQ
Sbjct: 192 DVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVK 251
Query: 245 --------------------GLCRKSQVNR----------------AVDLLEDMLNKGFV 268
G C++ ++ A++L +M NKG
Sbjct: 252 EQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQ 311
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +Y L++SLC + KL+EA LL M++ GC +++ YNT++ GFC+ + +A ++
Sbjct: 312 PDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEI 371
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M G N V+Y TL+ GLC A + M MI +G P ++++ FC
Sbjct: 372 FDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G + +A +++ + G P T+ ++ +C +E +L I ++KG
Sbjct: 432 EGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI---QLKG 484
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 170/341 (49%), Gaps = 23/341 (6%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ ILI L +A + IL+ + Y + P FT L++ + E D A +
Sbjct: 194 STFNILIKALCKAH--QIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVK 251
Query: 154 RSMLEFNCKPLPKQL----------NRILELL-----VTHRNYLRPAFDLFKSAHKHGVL 198
ML+ C + RI E L +++ A +L+ G
Sbjct: 252 EQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQ 311
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN+++ + C+ G + A L +M G +V +Y L+ G C+ ++ A ++
Sbjct: 312 PDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEI 371
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ M +G ++++Y TL++ LC+ ++++EA +L+ +M ++G PD YN+++ FCR
Sbjct: 372 FDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG--FSPHF 376
EG A +++ M SNGC P++V+Y TL+GGLC G +VA + ++ + KG +PH
Sbjct: 432 EGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPH- 490
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ +I+ + EA + E+ + G P T+ ++
Sbjct: 491 -AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIV 530
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 127/281 (45%), Gaps = 37/281 (13%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ + M C+P N +++ L +R L+ A L + G N +YN ++
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLC-YRGKLQEALGLLREMEISGCARNVITYNTLI 356
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC N I A +F++M +G+ + +Y L+ GLC+ +V A L++ M+ +G
Sbjct: 357 DGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLK 416
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR------- 321
PD +Y ++L CR+ +++A ++ M GC PDIV Y T++ G C+ GR
Sbjct: 417 PDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRL 476
Query: 322 ----------------------------AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+A ++ +M G P+ +Y+ + GL +
Sbjct: 477 LRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSN 536
Query: 354 QGM-FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G A ++ MI KGF P FS + L +G C++ D
Sbjct: 537 SGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMED 577
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +++ L R ++ A L G+ P+ +YN M+ FC GDI A + M
Sbjct: 388 NTLIDGLCKSRR-VQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMT 446
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G PD+ +Y L+ GLC+ +V A LL + KG V +Y ++ +L ++K+ +
Sbjct: 447 SNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTK 506
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTL 347
EA +L M+ KG PD Y V G G I +A + +M G LP S+ L
Sbjct: 507 EAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYML 566
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLEELLKA 405
GLC M D K + L++ K +FS + +I+GF + K +A L LL +
Sbjct: 567 AEGLCSLSMEDTLIKLVDLVMEKA---NFSQNEVVMIRGFLKIRKFQDALATLGGLLDS 622
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E G+ D Y L+ L +++ ++ M++KG PD ++ L+ +LC+ ++R
Sbjct: 151 EFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIR 210
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A ++ M G PD + T++ GF EG A +V E M GC V+ LV
Sbjct: 211 PAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLV 270
Query: 349 GGLCDQGMFDVAKKYMQLMI----------------SKGFSPHFSVSHALIKGFCNVGKV 392
G C +G + A ++ M +KG P + LI C GK+
Sbjct: 271 HGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKL 330
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
EA G+L E+ +G A + T+ ++ C +++E+ E+ +++ EI+G +R
Sbjct: 331 QEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQM---EIQGLSR 382
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 7/208 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+EIFD Q R+S TY LI L +++ ++ + E + P FTY
Sbjct: 368 AEEIFDQMEIQGLSRNS-VTYNTLIDGLCKSRRVQEAAQLMDQMIME--GLKPDKFTYNS 424
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ + +A ++M C+P ++ L + A L +S
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLC-KAGRVEVASRLLRSIQLK 483
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ-VNR 254
G++ +YN +++A A LF +M E+G PD +Y+I+ +GL +
Sbjct: 484 GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGE 543
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
AVD + +M+ KGF+P+ S+ L LC
Sbjct: 544 AVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
DI+ T+ S P + TY LI ++ + A + RS+ P N +++
Sbjct: 440 DIVQTMTSN--GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQ 497
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGV 232
L R + A LF+ + G P+ +Y I+ R +G I A +M E+G
Sbjct: 498 ALF-KRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGF 556
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+P+ S+ +L +GLC S + + L++ ++ K
Sbjct: 557 LPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKA 590
>gi|147778708|emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 168/317 (52%), Gaps = 3/317 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP V K+ +P + D ++ +F+ + + Y ++I KL +A+ F I+D++ T
Sbjct: 51 SPREVLKIFDGLRNPESVMPVLDSVCKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKT 110
Query: 121 LKSEHYPVTPSLFTY-LIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
LK + +F Y +IK+Y + PDRA++T M +F+C P K N +L +LV+
Sbjct: 111 LKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSA 170
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + ++ A + GV + NI+++ C +G++ A L ++ ++ P+V +
Sbjct: 171 KRF-DVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRT 229
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ LM GLC +V A+ LLE M +G PDT+ + L++ L ++ ++ E +LL RMK
Sbjct: 230 FSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMK 289
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+KGC P+ Y V+ G GR A + + M G P+ VSY+ ++ GLC + +
Sbjct: 290 LKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVA 349
Query: 359 VAKKYMQLMISKGFSPH 375
++ M+ +GF P
Sbjct: 350 DVVWILKQMVEQGFVPE 366
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+RAV+ L DM P ++ +LN L K+ +K+ G D N +
Sbjct: 139 DRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNIL 198
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V G CR G AC++L++ P C PN+ ++ TL+ GLC+ G + A ++ M +G
Sbjct: 199 VKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGV 258
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P V + LI G G+V+E +L + G P+ ++
Sbjct: 259 YPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSY 300
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVVLGFCREGRA 322
K F P+ YT ++N L + + ++ +K+ K C D+ YN + + GR
Sbjct: 79 KDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGRP 138
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A + L DMP C P++ ++ ++ L FDV K G + L
Sbjct: 139 DRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNIL 198
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+KG C G VD AC +L+E K P+ T+ ++ +C +E +L + + +
Sbjct: 199 VKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGV 258
Query: 443 KGDTRIVEAGIGLEDYLIGKTRSRPR 468
DT + + LI R R R
Sbjct: 259 YPDTVVF-------NILISGLRKRGR 277
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ L+ ES + AL M P N ++ L R + +L
Sbjct: 230 FSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL-RKRGRVEEGMELLGRM 288
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN SY ++ G A +M + GV P SY++++ GLC+++ V
Sbjct: 289 KLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLV 348
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
V +L+ M+ +GFVP+ + +L ++
Sbjct: 349 ADVVWILKQMVEQGFVPERWMWRRILQTM 377
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 3/379 (0%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P +V ++ SQ D +A + F +A RQ +RH Y ++ L + K +L+ +
Sbjct: 174 PSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLM 233
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
K TP F+ ++ Y+ + ALK M +P N +++ V N
Sbjct: 234 KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV-RANR 292
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G++PN +YN M+R +C + A L M +G +PD SY
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+M LC++ ++ DL++ M + G VPD ++Y TL++ L + EA L + K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFDV 359
G D + Y+ +V C+EGR +A ++ +M S G C P++V+Y +V G C G D
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AKK +Q+M + G P+ AL+ G C GK EA ++ + +P+ T+ +I+
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 420 QICAGEEMEKLGEVLNEIV 438
+ ++ + +V+ E+V
Sbjct: 533 GLRREGKLSEACDVVREMV 551
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + H HG PNT SY ++ C G A + N E P+ +Y ++M
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL R+ +++ A D++ +M+ KGF P + LL SLCR + EA K + KGC
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V++ TV+ GFC+ A VL+DM ++ +Y TLV L +G A + M
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG P +I +C +GKVD+ +LE+++ + + ++ ++C
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVL 710
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEA 451
++E+ +L ++++ + D + A
Sbjct: 711 GKLEEADTLLGKVLRTASRSDAKTCYA 737
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 128/242 (52%), Gaps = 4/242 (1%)
Query: 164 LPKQL--NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
+P Q+ N ++ +L H ++ A K A + G + Y+ ++ A C G +S A
Sbjct: 380 VPDQVTYNTLIHMLTKH-DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 222 TLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L N+M +G PDV +Y ++ G CR +V++A LL+ M G P+T+SYT LLN
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
+CR K EA +++ + +P+ + Y+ ++ G REG+ +AC V+ +M G P
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
V L+ LC G A+K+M+ ++KG + + +I GFC ++D A VL+
Sbjct: 559 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 618
Query: 401 EL 402
++
Sbjct: 619 DM 620
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLFTYLIKIYAESN 144
+++ FR Y ++ L + S D++ + S+ H P +T ++ +
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D+A K + M KP +L + L A ++ + +H PN+ +Y
Sbjct: 469 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE-AREMMNMSEEHWWSPNSITY 527
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+++M G +S A + +M +G P +L+Q LCR + + A +E+ LN
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG + +++TT+++ C+ +L A +L M + + D+ Y T+V ++GR +
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAE 647
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A ++++ M G P V+YRT++ C G D ++ MIS+ ++ + +I+
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIE 705
Query: 385 GFCNVGKVDEACGVLEELLKAG 406
C +GK++EA +L ++L+
Sbjct: 706 KLCVLGKLEEADTLLGKVLRTA 727
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 88/170 (51%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + Y ++L L + K + + ++L MK +G ++ V++ + R G+ DA KVL
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M G PNL+ T + + A ++++ M G P+ + +I+G+C++
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+V+EA +LE++ G P + ++ I+ +C + + ++ +++ ++ K
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 75/200 (37%), Gaps = 25/200 (12%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
S++DD+ + K +FTY L+ + A + + ML P P
Sbjct: 614 LSVLDDMYLINKH------ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP--- 664
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS-------YNIMMRAFCFNGDISIAY 221
VT+R + + K +L S YN ++ C G + A
Sbjct: 665 -------VTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEAD 717
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
TL K+ D ++ LM+G +K A + M N+ +PD L L
Sbjct: 718 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 777
Query: 282 CRKKKLREAYKLLCRMKVKG 301
K K+ EA KL+ R+ +G
Sbjct: 778 VLKGKVDEADKLMLRLVERG 797
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT +I + +++ D AL M N +++ L + + A +L K
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL-GKKGRIAEATELMKKM 655
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P +Y ++ +C G + + KM R + Y +++ LC ++
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKL 713
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
A LL +L D + L+ +K AYK+ CRM + PD+
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDV 767
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 42/374 (11%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
S P LA + FD+A Q ++H +Y L+ DIL+ KS H T
Sbjct: 4 SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLL-------------DILV--KSGHQFRTGK 48
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ L+ NL TF+ ++ NCK Q R LE L A D F
Sbjct: 49 VYKDLLHSGCSPNLV-----TFKILIRGNCKA--GQATRALEFL--------RALDEFSV 93
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A P+ +N ++ +G+ A LF M V PD+ +Y ++ GLC+
Sbjct: 94 A------PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGN 147
Query: 252 VNRAVDLLEDMLNKG--FVPDTLSYTTLLNS-LCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ +A +LLE+M+ +G PD ++Y TL+N+ +C+ + EA ++L MK+ G PD++
Sbjct: 148 LEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVIT 207
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN+++ C GR ++A ++L+ M C P+LV++ TL+ G C GM A + ++ M
Sbjct: 208 YNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 264
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ P L+ G C VG+V A +LEE+++ G P + +V +C E+E
Sbjct: 265 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 324
Query: 429 KLGEVLNEIVKVEI 442
+ +++ E+ EI
Sbjct: 325 EAHKLVKEMSAREI 338
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 44/284 (15%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ ++N ++ FC G + A + +M ++PDV +Y IL+ GLCR QV A L
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK------------------ 300
LE+++ +G++PD ++YT+L++ LC+ ++ EA+KL+ M +
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354
Query: 301 --------------------------GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
G PD+V YNT++ G C+ R +AC + ++M S
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC PN V+ ++V GLC G D A + M K +P+ V +LI G C ++D+
Sbjct: 415 LGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDD 474
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
AC VL+ + G A + + ++ + G + + + +E+V
Sbjct: 475 ACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMV 518
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 14/297 (4%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRPA 185
+P L T+ L+ + ++ + RAL+ M N LP + IL + ++ A
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI--LPDVITYTILVNGLCRVGQVQVA 291
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM---------PDV 236
F L + + G +P+ +Y ++ C +G+I A+ L +M R ++ P +
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y I++ GL + +++AV L+ D++ +G+VPD ++Y TL++ LC+ ++REA L
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 411
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M GC P+ V +VV G CR GR DA ++ +M PN+V Y +L+ GLC
Sbjct: 412 MASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 471
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
D A + M +G + LI + G+V EA + +E++ G P T
Sbjct: 472 MDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++P +YNI++ +G IS A +L + + RG +PDV +Y L+ GLC+ ++V A
Sbjct: 347 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 406
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
DL ++M + G P+ ++ +++ LCR ++ +A+ L+ M K P++V Y +++ G
Sbjct: 407 DLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 466
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ R DAC VL+ M G + +YR L+ + G A M+++GF P
Sbjct: 467 CKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDG 526
Query: 377 SVSHAL 382
S S L
Sbjct: 527 STSKTL 532
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 179 RNYLRP--AFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
R RP A F A + G + SYN ++ +G ++ + G P+
Sbjct: 2 RRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPN 61
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +++IL++G C+ Q RA++ L + PD + L++ L + +A KL
Sbjct: 62 LVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG--CLPNLVSYRTLV-GGLC 352
M+ NPDI YNTV+ G C+ G A ++LE+M G P++V+Y TL+ G+C
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G + A + + M G +P +++I C G+V EA +L+ + +P
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLV 238
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + + EVL E+ + I D
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 272
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 207/426 (48%), Gaps = 30/426 (7%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
SSP+ + S + + SP P V ++ + + F + SR+ F+H S ++ +
Sbjct: 59 SSPKWEHSSELCH-LSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSM 117
Query: 102 ILKLGRAKYFSLIDDILITL------KSEHYPVTPSL---------------FTYLIKIY 140
+ +L R + F+ D + I + + E VT L FT L+
Sbjct: 118 LNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQL 177
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ ++ D A + ML +P N ++ +L + ++ A + ++ PN
Sbjct: 178 GKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCK-KGRVQEAKLIMSHIFRYDAYPN 236
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+Y ++ C N ++ +A+ +F++M + G P+ +Y L+ GLC + ++ A+D+LE
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M+ KG P +YT L SLC EA +LL +MK +GC P+I + ++ G R+G
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDG 356
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ A + M ++G +P V+Y L+ LC +G F+ A + M+S G P +
Sbjct: 357 KFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+IK FC +G + +A + +++LKAG +P+ T+ ++ C K G + N + +
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC------KQGNLNNAMRLL 470
Query: 441 EI-KGD 445
EI KG+
Sbjct: 471 EIMKGN 476
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 8/325 (2%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+T + ++ K GR + LI + Y P+ FTY LI + ++ D A F
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIF-----RYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ C P + ++ L + L A D+ + + G+ P +Y I + + C
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCS-EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G S A L KM +RG +P+++++ L+ GL R + A+ L ML G VP T++
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+N LC + + A+ + M G P YN ++ FC G A + + M
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+++Y TL+ G C QG + A + +++M G P LI GF GK++
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499
Query: 394 EACGVLEELLKAGEAPHEDTWVMIV 418
A + +++ G +P+ T+ I+
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAII 524
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 163/368 (44%), Gaps = 2/368 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I ++ L A S ++L +K FT LI + + A+ + M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P N ++ L + AF +FK HG LP+T++YN +++ FC GD
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRF-ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A +F+KM + G P+V +Y L+ G C++ +N A+ LLE M G PD +YT
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ R KL A L M G +P+ V Y ++ G+ + DA + M +G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LP+ +Y ++ G A+ + M+ +G P+ + I G C G+ A
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
+ E+ K P+ T+ ++ +C E E+ N + ++ G V+ L
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED-AEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 457 DYLIGKTR 464
L G+ R
Sbjct: 667 KGLCGEGR 674
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 5/293 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY LI ++ + A F M+E P I++ + A
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK-VDDALA 538
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF + G LP++++YN+M+ F IS A KM ++G++P+V +Y + GLC
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA--YKLLCRMKVKGCNPD 305
R + A + +M + + P+ +Y++L+ LC++ + +A Y LL R+ GC P+
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y T+V G C EGR +A +++ M G P+ YR L+ G C + A
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFY 718
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M + GF H S ALI C ++EA + + +L+ E W +++
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLL 771
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 5/302 (1%)
Query: 126 YPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ ++P+ TY I NL D AL F M+E P + N ++ + N +
Sbjct: 511 HGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF-SKTNSIS 569
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + K G+LPN +Y + C NG +A+ +F++M +R P++ +Y L+
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629
Query: 244 QGLCRKSQVNRA--VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
GLC++ + A +LL + + G P+ +YTTL+ LC + + EA +L+ M+ KG
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P Y +++G C+ + A + M + G +L Y+ L+ LC + + A+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Q M+ K ++ L+ G G+ D +L + + T+VM+ ++
Sbjct: 750 CIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
Query: 422 CA 423
A
Sbjct: 810 SA 811
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 97 TYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY ILI L+ G + L+D++L + P +FTY +I+ + + DRA
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEML------SRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ R++ C+P N +L L+ + L PN +Y+I++
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKW-EEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G I A L M E+G+ PD SY L+ CR+ +++ A++ LE M++ G +PD
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y T+L +LC+ K +A ++ ++ GC+P+ YNT+ G I A ++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M SNG P+ ++Y +++ LC +GM D A + + M S F P + ++ GFC
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVKVE 441
++++A VLE ++ G P+E T+ +++ I AG E + E+ N++V+++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM-ELANDLVRID 573
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 4/308 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F Y LI + + N D A + M + P N ++ L + R L A
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-RGKLDLALK 214
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ P +Y I++ A G + A L ++M RG+ PD+ +Y +++G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V+RA +++ ++ KG PD +SY LL +L + K E KL+ +M + C+P++V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ CR+G+ +A +L+ M G P+ SY L+ C +G DVA ++++ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEE 426
IS G P + ++ C GK D+A + +L + G +P+ ++ M +G++
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 427 MEKLGEVL 434
+ L +L
Sbjct: 455 IRALHMIL 462
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 124/240 (51%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN ++ FC I A + ++M + PD +Y I++ LC + +++ A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +L+ P ++YT L+ + + + EA KL+ M +G PD+ YNT++ G C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EG A +++ ++ GC P+++SY L+ L +QG ++ +K M M S+ P+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI C GK++EA +L+ + + G P ++ ++ C ++ E L ++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 122/221 (55%), Gaps = 3/221 (1%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ E+ PDV +Y L+ G C+ ++++ A +L+ M +K F PDT++Y ++ SLC +
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
KL A K+L ++ C P ++ Y ++ EG +A K++++M S G P++ +Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
T++ G+C +GM D A + ++ + KG P + L++ N GK +E ++ ++
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ T+ +++ +C ++E E +N + ++ KG T
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIE---EAMNLLKLMKEKGLT 365
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 207/426 (48%), Gaps = 30/426 (7%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
SSP+ + S + + SP P V ++ + + F + SR+ F+H S ++ +
Sbjct: 59 SSPKWEHSSELCH-LSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSM 117
Query: 102 ILKLGRAKYFSLIDDILITL------KSEHYPVTPSL---------------FTYLIKIY 140
+ +L R + F+ D + I + + E VT L FT L+
Sbjct: 118 LNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQL 177
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ ++ D A + ML +P N ++ +L + ++ A + ++ PN
Sbjct: 178 GKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCK-KGRVQEAKLIMSHIFRYDAYPN 236
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+Y ++ C N ++ +A+ +F++M + G P+ +Y L+ GLC + ++ A+D+LE
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M+ KG P +YT L SLC EA +LL +MK +GC P+I + ++ G R+G
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDG 356
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ A + M ++G +P V+Y L+ LC +G F+ A + M+S G P +
Sbjct: 357 KFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+IK FC +G + +A + +++LKAG +P+ T+ ++ C K G + N + +
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC------KQGNLNNAMRLL 470
Query: 441 EI-KGD 445
EI KG+
Sbjct: 471 EIMKGN 476
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 8/325 (2%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+T + ++ K GR + LI + Y P+ FTY LI + ++ D A F
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIF-----RYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ C P + ++ L + L A D+ + + G+ P +Y I + + C
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCS-EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G S A L KM +RG +P+++++ L+ GL R + A+ L ML G VP T++
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+N LC + + A+ + M G P YN ++ FC G A + + M
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+++Y TL+ G C QG + A + +++M G P LI GF GK++
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499
Query: 394 EACGVLEELLKAGEAPHEDTWVMIV 418
A + +++ G +P+ T+ I+
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAII 524
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 163/368 (44%), Gaps = 2/368 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I ++ L A S ++L +K FT LI + + A+ + M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P N ++ L + AF +FK HG LP+T++YN +++ FC GD
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRF-ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A +F+KM + G P+V +Y L+ G C++ +N A+ LLE M G PD +YT
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ R KL A L M G +P+ V Y ++ G+ + DA + M +G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LP+ +Y ++ G A+ + M+ +G P+ + I G C G+ A
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
+ E+ K P+ T+ ++ +C E E+ N + ++ G V+ L
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED-AEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 457 DYLIGKTR 464
L G+ R
Sbjct: 667 KGLCGEGR 674
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 5/293 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY LI ++ + A F M+E P I++ + A
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK-VDDALA 538
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF + G LP++++YN+M+ F IS A KM ++G++P+V +Y + GLC
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA--YKLLCRMKVKGCNPD 305
R + A + +M + + P+ +Y++L+ LC++ + +A Y LL R+ GC P+
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y T+V G C EGR +A +++ M G P+ YR L+ G C + A
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFY 718
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M + GF H S ALI C ++EA + + +L+ E W +++
Sbjct: 719 SMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLL 771
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 126 YPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ ++P+ TY I NL D AL F M+E P + N ++ + N +
Sbjct: 511 HGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF-SKTNSIS 569
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + K G+LPN +Y + C NG +A+ +F++M +R P++ +Y L+
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629
Query: 244 QGLCRKSQVNRA--VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
GLC++ + A +LL + + G P+ +YTTL+ LC + + EA +L+ M+ KG
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P Y +++G C+ + A + M + G +L Y+ L+ LC + + A+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Q M+ K ++ V L+ G G+ D +L + + T+VM+ ++
Sbjct: 750 CIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
Query: 422 CA 423
A
Sbjct: 810 SA 811
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 183/346 (52%), Gaps = 5/346 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP V +I P S + +++ + Y +++ +L + F I+ +++
Sbjct: 57 SPNEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLR 116
Query: 121 LKSE-HYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K+E ++ ++ F ++IKIY + ++A+ T M +NC P K N +L LLV+
Sbjct: 117 IKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSA 176
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + +++ A K G+ + NI+++ C +G++ A + ++ ++ P+V +
Sbjct: 177 KMF-DVVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRT 235
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ GLC ++ RA++L M N+G PDT+++ L++ L +KK++ EA +LL RMK
Sbjct: 236 FSTLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMK 295
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+KGC P+ Y V+ G G+ I+A + M S G P+ VSY+ L+ GLC + + +
Sbjct: 296 LKGCYPNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTE 355
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
++ M+ +GF P + +++ C + +E + +E+ +
Sbjct: 356 DVDWVLKQMVMQGFVPKVGMWKVILR--CMLSGNEECIDITDEVFE 399
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 5/182 (2%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN--PDIVHYNTVVLGFCREGRA 322
K + P+ YT +++ L + + K++ R+K + D Y+ + + GR
Sbjct: 85 KDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRL 144
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A L DMP+ C P++ ++ ++ L MFDV + G + L
Sbjct: 145 NKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNIL 204
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+KG C G +D A VL+E + P+ T+ ++ +C E LG L K+E
Sbjct: 205 VKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGE---LGRALELFCKMEN 261
Query: 443 KG 444
+G
Sbjct: 262 EG 263
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 148/267 (55%), Gaps = 4/267 (1%)
Query: 175 LVTHR----NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+V HR +R A +F + K G+ P+ S+N +M + GD+ + L + M
Sbjct: 141 IVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 200
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
GV PDV +Y +L+ GLC++S+V+ A +L +ML++G VP+ +++TTL++ C+ + A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSA 260
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ +M +G +PD++ YNT++ G C++G ++++M NG P+ ++Y TL+ G
Sbjct: 261 MEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDG 320
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C +G + A ++ + MI + AL+ G C G+ D+A + E+L G P
Sbjct: 321 CCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPD 380
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEI 437
T+ MI+ + C ++ +L E+
Sbjct: 381 NGTYTMIINEFCKKGDVRTASRLLKEM 407
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ D + YP + F ++ + + RA F ++ ++ +P
Sbjct: 111 LMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 171 VVSFNTLMNGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
N+M +RG++P+ ++ L+ C+ V+ A+++ + ML++GF PD ++Y TL+ LC+K
Sbjct: 230 NEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++ L+ M + G PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 290 GDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LV GLC +G D A+K + M+S G P +I FC G V A +L+E+ +
Sbjct: 350 TALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQR 409
Query: 405 AGEAP 409
G P
Sbjct: 410 DGHVP 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D A + F ML+ P ++++ + + A
Sbjct: 202 VQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKN-GMVDSA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++K G P+ +YN ++ C GD+ L ++M G+ PD +Y L+ G
Sbjct: 261 MEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A + + M+ + D ++YT L++ LC++ + +A K+ M G PD
Sbjct: 321 CCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPD 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y ++ FC++G A ++L++M +G +P +V+
Sbjct: 381 NGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 194/401 (48%), Gaps = 27/401 (6%)
Query: 65 VQKLIASQSDPLLAKEIFD-----YASRQPN-FRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ +L+ ++ DP A IFD ++ P+ S +T +L +L A + L +L
Sbjct: 20 LHRLVRAERDPRRALAIFDGATAAASTSAPDPITPSPATVSLLTSRLASAGHLPLATSLL 79
Query: 119 ITLKSEHYPVTPSL------FTYLIKIYAESNLPDRALKTFRSMLEFNCKPL-PKQLNRI 171
S V PS+ F L++ ++ ++ P AL FRS P + N +
Sbjct: 80 ----SRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAV 135
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L LV H ++L A L G P +YN++++A C + I L ++F
Sbjct: 136 LAALVAH-SHLPLARSLLADMRAAGFAPTAATYNVLLKAHCSDAAAHIEDAL--RLFRNI 192
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
PDV SY ++ GLCR+ ++ A+D+ +M+ K P ++YTT+++ L R+ +A
Sbjct: 193 PKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDAL 252
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
K+ M +G +P++V Y++++ G C+ GRA A ++L+ M LPN ++Y +++ GL
Sbjct: 253 KIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGL 312
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + M A + + M +G P + LI G C+ G+ EA L+E++ AG P+
Sbjct: 313 CKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNR 372
Query: 412 DTWVM-------IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
TW + ++ +C E+ + +V I D
Sbjct: 373 VTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTD 413
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 156/369 (42%), Gaps = 43/369 (11%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A +F A HS +Y ++ L + L +L +++ + T + +
Sbjct: 109 PLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYN 168
Query: 135 YLIKIY---AESNLPDRALKTFR-----------SMLEFNCKP--LPKQLNRILELL--- 175
L+K + A +++ D AL+ FR ++++ C+ L + L+ E++
Sbjct: 169 VLLKAHCSDAAAHIED-ALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKC 227
Query: 176 ----------VTHRNYLRPAFD----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
V H FD +F + GV PN +Y+ ++ C G + A
Sbjct: 228 IAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSAL 287
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M + +P+ +Y ++ GLC++ ++ A+++L+ M +G PD + L+ L
Sbjct: 288 ELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGL 347
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHY-------NTVVLGFCREGRAIDACKVLEDMPS 334
C + EA L M + G P+ V + NTV+ C +G A +V + +
Sbjct: 348 CDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRT 407
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV-D 393
+ ++ LV + A+ + M+S+ P A+I G+ + KV
Sbjct: 408 RSISTDPTTFHLLVESFSKNNIEKAARVVLD-MLSERCIPERETWDAIISGYWSKKKVRQ 466
Query: 394 EACGVLEEL 402
EA + + L
Sbjct: 467 EAKEIWDHL 475
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 183/393 (46%), Gaps = 40/393 (10%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
S+S + S + +LI Q A E F +AS P F HS STY L KL + F
Sbjct: 22 SSSLLSVPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFYKLCVFRRFD 81
Query: 113 LIDDILITL-KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
+ +L + +S P ++F +I+ + + L R + + +F KP K N I
Sbjct: 82 TVYQLLDEMPESTGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSI 141
Query: 172 LELLVTH-----RNYLR-----------------------------PAFDLFKSAHKHGV 197
L++LV R + R F L + GV
Sbjct: 142 LDVLVKEDIDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGV 201
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PNT YN ++ A C NG + A +L ++M E P+ ++ IL+ C + ++ +++
Sbjct: 202 APNTVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMV 257
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
LLE + G VPD ++ T ++ LC + ++ EA ++L R++ KG D+V NT+V G+C
Sbjct: 258 LLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 317
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
G+ A + ++M G LPN+ +Y L+ G CD GM D A M + +F+
Sbjct: 318 AVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFA 377
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+ LI+G G+ D+ +L EL++ E H
Sbjct: 378 TFNTLIRGLSVRGRTDDGIKIL-ELMQDSETVH 409
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 162/384 (42%), Gaps = 54/384 (14%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ +L SE F LI Y +++ P
Sbjct: 220 KVGRAR----------SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVP 269
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++E+L + + A ++ + G + + N +++ +C G + +A
Sbjct: 270 DVVTVTKVMEVLC-NEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRF 328
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F +M +G +P+VE+Y +L+ G C ++ A+D DM + ++ TL+ L
Sbjct: 329 FQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSV 388
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVH------YNTVVLGFCREGRAIDACKVL-------- 329
+ + + K+L M+ + + VH YN+V+ GF +E R DA + L
Sbjct: 389 RGRTDDGIKILELMQ----DSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKMEKLFP 444
Query: 330 -------------------------EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ M G +P+++ L+ +G + + +
Sbjct: 445 RAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELI 504
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+++G+ P S +A+I GFC KV +E++ + G P +++ ++ ++C
Sbjct: 505 NDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVK 564
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+++K +L+ +V+ I D+ +
Sbjct: 565 GDIQKAWLLLSLMVEKSIVPDSSM 588
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
K+F R V S++++ LC K ++ + M +G VP + L++ ++
Sbjct: 441 KLFPRAV---DRSFKLI--SLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEG 495
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+ E +L+ M +G P +N V++GFC+E + ++ K +EDM GC+P+ SY
Sbjct: 496 YMEETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYN 555
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
L+ LC +G A + LM+ K P S+ +L+ FC
Sbjct: 556 PLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLM--FC 595
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 110/268 (41%), Gaps = 35/268 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A F+ + G LPN ++YN+++ FC G + A FN M + + ++
Sbjct: 322 MRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNT 381
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK----------------GF------------------ 267
L++GL + + + + +LE M + GF
Sbjct: 382 LIRGLSVRGRTDDGIKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKMEK 441
Query: 268 -VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P + + L SLC K + + +M +G P ++ + ++ + +EG +
Sbjct: 442 LFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETL 501
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++ DM + G LP ++ ++ G C + K+++ M +G P + L++
Sbjct: 502 ELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEEL 561
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C G + +A +L +++ P W
Sbjct: 562 CVKGDIQKAWLLLSLMVEKSIVPDSSMW 589
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDI 217
K P+ ++R +L+ + D K+A+ G +P+ + ++ + G +
Sbjct: 441 KLFPRAVDRSFKLISLCE---KGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYM 497
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
L N M RG +P ++ ++ G C++ +V + +EDM +G VPD SY L
Sbjct: 498 EETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPL 557
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC-REGRAIDACKVLEDMPSN 335
L LC K +++A+ LL M K PD +++++ FC + AI L+D+ N
Sbjct: 558 LEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLM--FCLSQKTAIHLNTSLQDIIEN 614
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 70/152 (46%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P + + + C G + T +++M G +P V L+ ++ + +
Sbjct: 442 LFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETL 501
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L+ DM+ +G++P + ++ ++ C++ K+ K + M +GC PD YN ++
Sbjct: 502 ELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEEL 561
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
C +G A +L M +P+ + +L+
Sbjct: 562 CVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLM 593
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAID 324
GF+ +Y L LC ++ Y+LL M + G PD + T++ GF R
Sbjct: 59 GFIHSRSTYRALFYKLCVFRRFDTVYQLLDEMPESTGLPPDDAIFVTIIRGFGRARLTKR 118
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL-MISKGFSPHFSVSHALI 383
V++ + G P+L + +++ L + + D+A+++ + M++ G L+
Sbjct: 119 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDI-DIAREFFRRKMMASGIQGDEYTYGILM 177
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
KG C ++ + +L+ + G AP+ + ++ +C ++ + +++E+
Sbjct: 178 KGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSLMSEM 231
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI Y++ + L+ M+ P N ++ + + + + +
Sbjct: 487 LIHRYSQEGYMEETLELINDMVTRGYLPRSSTFNAVI-IGFCKEDKVMNGIKFVEDMAER 545
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G +P+ +SYN ++ C GDI A+ L + M E+ ++PD + LM L +K+ ++
Sbjct: 546 GCVPDRESYNPLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLMFCLSQKTAIHLN 605
Query: 256 VDLLEDMLNK 265
L + + N+
Sbjct: 606 TSLQDIIENR 615
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 165/346 (47%), Gaps = 12/346 (3%)
Query: 117 ILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
I + K E Y ++ L FT LI + + AL M++ +P +L
Sbjct: 91 IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
N + AF L K G PN YN ++ C NG+++IA L N+M ++G+
Sbjct: 151 FCL-VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y L+ GLC + + A +L DM+ + PD +++T L++ ++ L EA +L
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +P+ V YN+++ G C GR DA K + M S GC PN+V+Y TL+ G C
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M D K Q M +GF+ + LI G+C VGK+ A + ++ P T
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLI 460
+++ +C GE+ + +VK + D R E IG+ Y I
Sbjct: 390 CILLHGLCVN------GEIESALVKFD---DMRESEKYIGIVAYNI 426
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 156/319 (48%), Gaps = 3/319 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PS+ T L+ + + N A+ SM F P N ++ L +R+ L A +
Sbjct: 672 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD-LNNALE 730
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F K G+ + +YN ++ +G + A L M +R + P+V + L+
Sbjct: 731 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 790
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ + A +L ++M+ + VP+ +Y +L+N C L +A + M KGC PD+V
Sbjct: 791 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 850
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R D K+ +M G + + +Y TL+ G C G +VA+K M
Sbjct: 851 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 910
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G SP + L+ CN GK+++A ++E+L K+ T+ +I+ +C +++
Sbjct: 911 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 970
Query: 428 EKLGEVLNEIVKVEIKGDT 446
++ + + + +K D
Sbjct: 971 KEAWCLFRSLTRKGVKPDA 989
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 1/282 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI + S A + R M++ P +++ V N L A +L+K
Sbjct: 747 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-ARNLYKEM 805
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ V+PN +YN ++ FC +G + A +F+ M +G PDV +Y L+ G C+ +V
Sbjct: 806 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ L +M +G V D +Y TL++ C+ KL A K+ RM G +PDIV YN +
Sbjct: 866 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ C G+ A ++ED+ + ++++Y ++ GLC A + + KG
Sbjct: 926 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P +I G C G EA + + + G P E +
Sbjct: 986 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 142/336 (42%), Gaps = 40/336 (11%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A F ML+ +P+P R+L + + N L+ G+ + S+
Sbjct: 586 DDAFSLFCEMLQ--SRPIPSIVDFTRVLTV-IAKMNKFDIVIYLYHKMENLGISHDLYSF 642
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
I++ FC +S+A L KM + G P + + L+ G C+ ++ AV L++ M
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
GFVP+ + Y T++N LC+ + L A ++ M+ KG D V YNT++ G GR D
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 325 ACKVLEDMPS-----------------------------------NGCLPNLVSYRTLVG 349
A ++L DM +PN+ +Y +L+
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G C G AK LM+SKG P + LI GFC +V++ + E+ G
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ C ++ +V N +V + D
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 918
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + R M++ + P ++++ V N L A +L+K + V PN +YN ++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGN-LDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G + A F+ M +G P+V +Y L+ G C+ V+ + L + M +GF
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +Y TL++ C+ KLR A + C M + PDI+ + ++ G C G A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+DM + +V+Y ++ GLC + A + + +G P +I G C
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 389 VGKVDEACGVLEELLKAG 406
G EA ++ + + G
Sbjct: 469 NGPRREADELIRRMKEEG 486
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 40/241 (16%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH-RNY-LRPAFDLFK 190
FT LI ++ + D A + ++ M++ + P N I+ L H R Y + FDL
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 191 SAHKHGVLPNTKSYNIMMRAFC-------------------FNGDI-------------- 217
S G PN +YN ++ FC FN DI
Sbjct: 309 SK---GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 218 --SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+A +F M R V PD+ ++ IL+ GLC ++ A+ +DM ++Y
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+++ LC+ K+ +A++L CR+ V+G PD Y ++LG C+ G +A +++ M
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 336 G 336
G
Sbjct: 486 G 486
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ LF +M +P + + L+ + + + M G D S+T L++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR +L A +L +M G P IV + +++ GFC R DA ++ M +G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V Y TL+ GLC G ++A + + M KG + L+ G C G+ +A +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+++K P T+ ++ +++ E+ E+++ +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A L +M++ +P + +T LL + ++ +M++ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D+ + ++ FCR R A VL M G P++V++ +L+ G C A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ LM+ G+ P+ V + LI G C G+++ A +L E+ K G T+ ++ +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C +L +++K I D
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDV 246
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
AK +FD + F TY LI ++K D + + + + + FTY
Sbjct: 833 AKYMFDLMVSKGCFPDV-VTYNTLITGFCKSKRVE--DGMKLFCEMTYQGLVGDAFTYNT 889
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI Y ++ + A K F M++ P N +L+ L + + A + + K
Sbjct: 890 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN-GKIEKALVMVEDLQKS 948
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ + +YNI+++ C + A+ LF + +GV PD +Y ++ GLCRK A
Sbjct: 949 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 1008
Query: 256 VDLLEDMLNKGFVPDTLSYTTLL 278
L M GF+P Y L
Sbjct: 1009 DKLCRRMKEDGFMPSERIYDETL 1031
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 119/308 (38%), Gaps = 43/308 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
+ A++LF GV P+ ++Y IM+ C NG A L +M E G++ + +
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDD 496
Query: 239 -----------YRILMQGLCRKSQVN-----RAVDLLEDMLNKGFV------------PD 270
+ ++ + +S+ N R + + KGFV P+
Sbjct: 497 HLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPE 556
Query: 271 T---LSYTTLLNSLCRKKKLR---------EAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
T S++ + +++LR +A+ L C M P IV + V+ +
Sbjct: 557 TSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAK 616
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ + M + G +L S+ L+ C +A + M+ GF P
Sbjct: 617 MNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVT 676
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+L+ GFC + EA +++ + G P+ + ++ +C ++ EV +
Sbjct: 677 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 736
Query: 439 KVEIKGDT 446
K I+ D
Sbjct: 737 KKGIRADA 744
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 131/240 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK + V+P+T ++NI++ G I A +F M E+GV P+V +Y LM
Sbjct: 171 ATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMD 230
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C +SQ++ A L M+ KG P SY L+ C+ ++ EA LL M K P
Sbjct: 231 GYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTP 290
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y+T++ GFC++GR DA K+LE+M S G LP+L++Y ++ GLC QG D A + +
Sbjct: 291 DTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELL 350
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M P+ + LI+G CN GK++ A + L G P T+ +++ + G
Sbjct: 351 KAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKG 410
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 171/343 (49%), Gaps = 9/343 (2%)
Query: 112 SLIDDILITLKSE------HYPVTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKP 163
SL D LIT E + ++P++ TY ++ NL + A F+ M+E N P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N +++ L + + A +F++ + GV PN +YN +M +C + A L
Sbjct: 186 DTVTFNILVDGL-SKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
FN M +G P V SY IL++G C+ +++ A LL +M +K PDT++Y+TL+ C+
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ ++A KLL M+ G PD++ Y+ V+ G C++G +A ++L+ M + PN+
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ G+C+ G + A++ + KG P +I G G +EAC + ++
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
G P+ T+ +I+ + G ++ E+V D+
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADS 467
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 148/270 (54%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
++ ++ AF + + K G+ PN +++ ++ I A LF++M + G PDV
Sbjct: 23 SNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDV 82
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y ++ GLC+ A+ LL+ M KG P+ + Y+T+++SLC+ K + EA + L
Sbjct: 83 ITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSE 142
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M +G +P++V Y++++ GFC GR+ +A + + M +P+ V++ LV GL +GM
Sbjct: 143 MVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGM 202
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A+ + MI KG P+ + +AL+ G+C+ ++DEA + +++ G AP ++ +
Sbjct: 203 ILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNI 262
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ C +++ +L E+ + DT
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 148/307 (48%), Gaps = 3/307 (0%)
Query: 133 FTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
T LI + SN A +M + +P + +L L + + + A LF
Sbjct: 13 LTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGL-SSKAKIIDAVKLFD 71
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
K G P+ +Y+ ++ C G ++A L KM E+G P+V Y ++ LC+
Sbjct: 72 EMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDK 131
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A++ L +M+N+G P+ ++Y+++L+ C + EA L +M + PD V +N
Sbjct: 132 LITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFN 191
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+V G +EG ++A V E M G PN+ +Y L+ G C Q D A+K +M+ K
Sbjct: 192 ILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G +P + LIKG C G++DEA G+L E+ P T+ ++ C +
Sbjct: 252 GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311
Query: 431 GEVLNEI 437
++L E+
Sbjct: 312 QKLLEEM 318
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 145/285 (50%), Gaps = 1/285 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L+ ++ + A F +M+E +P N +++ + ++ + A LF
Sbjct: 190 FNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS-QSQMDEAQKLFNIM 248
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G P+ +SYNI+++ C +G I A L +M + + PD +Y LM+G C+ +
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A LLE+M + G +PD ++Y+ +L+ LC++ L EA++LL M+ P+I Y +
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G+ A ++ ++ G P++V+Y ++ GL G+ + A + + M G
Sbjct: 369 IQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGC 428
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
P+ + +I+GF G A ++EE++ G + T+ M+
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 165/346 (47%), Gaps = 12/346 (3%)
Query: 117 ILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
I + K E Y ++ L FT LI + + AL M++ +P +L
Sbjct: 91 IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
N + AF L K G PN YN ++ C NG+++IA L N+M ++G+
Sbjct: 151 FCL-VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y L+ GLC + + A +L DM+ + PD +++T L++ ++ L EA +L
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +P+ V YN+++ G C GR DA K + M S GC PN+V+Y TL+ G C
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M D K Q M +GF+ + LI G+C VGK+ A + ++ P T
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLI 460
+++ +C GE+ + +VK + D R E IG+ Y I
Sbjct: 390 CILLHGLCVN------GEIESALVKFD---DMRESEKYIGIVAYNI 426
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + R M++ + P ++++ V N L A +L+K + V PN +YN ++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGN-LDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G + A F+ M +G P+V +Y L+ G C+ V+ + L + M +GF
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +Y TL++ C+ KLR A + C M + PDI+ + ++ G C G A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+DM + +V+Y ++ GLC + A + + +G P +I G C
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 389 VGKVDEACGVLEELLKAG 406
G EA ++ + + G
Sbjct: 469 NGPRREADELIRRMKEEG 486
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 40/241 (16%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH-RNY-LRPAFDLFK 190
FT LI ++ + D A + ++ M++ + P N I+ L H R Y + FDL
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 191 SAHKHGVLPNTKSYNIMMRAFC-------------------FNGDI-------------- 217
S G PN +YN ++ FC FN DI
Sbjct: 309 SK---GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 218 --SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+A +F M R V PD+ ++ IL+ GLC ++ A+ +DM ++Y
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+++ LC+ K+ +A++L CR+ V+G PD Y ++LG C+ G +A +++ M
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 336 G 336
G
Sbjct: 486 G 486
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ LF +M +P + + L+ + + + M G D S+T L++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR +L A +L +M G P IV + +++ GFC R DA ++ M +G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V Y TL+ GLC G ++A + + M KG + L+ G C G+ +A +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+++K P T+ ++ +++ E+ E+++ +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A L +M++ +P + +T LL + ++ +M++ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D+ + ++ FCR R A VL M G P++V++ +L+ G C A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ LM+ G+ P+ V + LI G C G+++ A +L E+ K G T+ ++ +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C +L +++K I D
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDV 246
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 182/383 (47%), Gaps = 3/383 (0%)
Query: 65 VQKLIASQSDPLLAKEIFD-YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
V K+ D LA E+F +S + F+HS T L+ R K ++L +
Sbjct: 28 VVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELA 87
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYL 182
+ + LI Y + P+ A R M E + P K N +L L L
Sbjct: 88 TTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVL 147
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D F++ +G + +Y ++ N I A L K+ G P + +Y L
Sbjct: 148 -AAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNAL 206
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ ++ A+DLL +++ G PD ++YT+L++ L ++K+ EAYKL M ++G
Sbjct: 207 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 266
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D V Y ++ G + G+ A V + M S GC+P++V+ T++ GLC G A +
Sbjct: 267 VLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 326
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M ++G +P+ V ALI G C K+D A +L ++ KA P T+ +++ +C
Sbjct: 327 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 386
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
++E +E+++ K D
Sbjct: 387 KSGDVEAARAFFDEMLEAGCKPD 409
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++K+ G +P+ + + M+ C G I A +F M RG+ P+ Y L+
Sbjct: 289 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +++ A+++L M PDT++Y L++ LC+ + A M GC P
Sbjct: 349 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN +V GFC+ G AC V +DM S+ C PN+V+Y TL+ GLC + A Y
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYF 468
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
Q M +G P V +L+ G C GK++ C + +E+ ++G A + T ++ +C
Sbjct: 469 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKA 527
Query: 425 EEMEKLGEVLNEIVK 439
+++ + N I K
Sbjct: 528 NRVDEAVSLFNAIRK 542
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 5/332 (1%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H +S + + L A + +L L + P + F +I Y + L +RA
Sbjct: 461 HDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYA 520
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ M++F P + +L LV + L A+ G ++ +++ +
Sbjct: 521 YGIMVKFGLTPSSSTCSSLLISLV-RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 579
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G +++A +L+N+M RGV PD ++ + GLC + A D+ DML KGFVP+
Sbjct: 580 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 639
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y +L+ C+ KL EA KL+ M +G PDI N ++ G C++GR A + DM
Sbjct: 640 VYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM 699
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDV--AKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
G P++V+Y TL+ G C FDV A M M G+ P + + I G+C V
Sbjct: 700 CRMGLSPDIVTYNTLIDGYCKA--FDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVR 757
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
K++ A +LEEL+ G P+ T+ ++ +C
Sbjct: 758 KINRAVMILEELISVGIVPNTVTYNTMINAVC 789
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 10/306 (3%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S+ST L++ L R L + + +PVT FT L+ Y + A +
Sbjct: 532 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 591
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P + L + A+D+F + G +PN YN ++ FC
Sbjct: 592 NEMKGRGVFPDAVAFAAFINGLCIS-GLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCK 650
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G ++ A L +M +RG++PD+ + +++ GLC++ ++ A++ DM G PD ++
Sbjct: 651 VGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVT 710
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL++ C+ + A L+ +M G PD+ YN + G+C + A +LE++
Sbjct: 711 YNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELI 770
Query: 334 SNGCLPNLVSYRTLVGGLC----DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
S G +PN V+Y T++ +C D M AK ++ F P+ + L+ FC
Sbjct: 771 SVGIVPNTVTYNTMINAVCNVILDHAMILTAK-----LLKMAFVPNTVTVNVLLSQFCKQ 825
Query: 390 GKVDEA 395
G ++A
Sbjct: 826 GMPEKA 831
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+K ++L P N I+ + AF + K G+ P++ + +
Sbjct: 480 DEAMKLLENLLGKGIPPSVVAFNSIIAAY-GNAGLEERAFYAYGIMVKFGLTPSSSTCSS 538
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + G + A+ M ++G ++ +L+ G R VN A L +M +G
Sbjct: 539 LLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRG 598
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD +++ +N LC + +AY + M KG P+ YN+++ GFC+ G+ +A
Sbjct: 599 VFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEAL 658
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K++ +M G LP++ + ++ GLC QG +A + M G SP + LI G+
Sbjct: 659 KLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGY 718
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C V A ++ ++ +G P T+ + + C ++ + +L E++ V I +T
Sbjct: 719 CKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNT 778
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 75/424 (17%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAE--SNLPDRALK 151
+N T+ +LIL+ R K ++ I + L+ + + + P +++Y I I A AL
Sbjct: 287 NNFTFNLLILEFCR-KGWTRIGEALLHVMGK-FRCEPDVYSYNIVINANCLKGQSSYALH 344
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
M+E CKP I++ N + A F G+ NT YNIM+ +
Sbjct: 345 LLNLMIENGCKPSIATFCTIIDAFCKEGN-VELARKYFDEIEDMGLSQNTIVYNIMISGY 403
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQG-------------------------- 245
DIS A LF +M + ++PD ++ L+ G
Sbjct: 404 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 463
Query: 246 ---------LCRKSQVNRAVDLLEDMLNKGFVPDTLSY---------------------- 274
LC + + A+ LLE++L KG P +++
Sbjct: 464 SLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 523
Query: 275 -------------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
++LL SL RK L EA+ L M KG + + ++ G+ R G
Sbjct: 524 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 583
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A + +M G P+ V++ + GLC G+ A M+ KGF P+ V ++
Sbjct: 584 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 643
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI GFC VGK++EA ++ E+ K G P T MI+ +C M+ E ++ ++
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703
Query: 442 IKGD 445
+ D
Sbjct: 704 LSPD 707
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 159/356 (44%), Gaps = 19/356 (5%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSL 113
+S+ + S C + L+A++ LA++I ++++ + GR+K +
Sbjct: 160 DSEETVRSCCVLAHLLAAEQLRFLAQDIV--------------SWVVARIGPGRSKNLA- 204
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+ Y S+ L++ + +S + AL+ M E P P ++ +
Sbjct: 205 ---AFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFR 261
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
LL+ + + LF + G PN ++N+++ FC G I L + M +
Sbjct: 262 LLIRAGD-CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCE 320
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV SY I++ C K Q + A+ LL M+ G P ++ T++++ C++ + A K
Sbjct: 321 PDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKY 380
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
++ G + + + YN ++ G+ + A + E+M + +P+ +++ TLV G
Sbjct: 381 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 440
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G + + ++ + G S+ + G C G+ DEA +LE LL G P
Sbjct: 441 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPP 496
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ +MRAF + A + +KM E GV P+ + IL + L R L D++
Sbjct: 222 DTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 281
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P+ ++ L+ CRK R LL M C PD+ YN V+ C +G++
Sbjct: 282 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSY 341
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M NGC P++ ++ T++ C +G ++A+KY + G S + V + +I
Sbjct: 342 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 401
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G+ + +A + EE+ P T+ +V
Sbjct: 402 GYVKARDISQANLLFEEMRTKDIVPDGITFNTLV 435
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM+ + A+++L M G P+ + + L L R +KL + KG
Sbjct: 224 LMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 283
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ +N ++L FCR+G +L M C P++ SY ++ C +G A
Sbjct: 284 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 343
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ LMI G P + +I FC G V+ A +E+ G + + + +++
Sbjct: 344 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 403
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
++ + + E+ +I D
Sbjct: 404 VKARDISQANLLFEEMRTKDIVPD 427
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 196/407 (48%), Gaps = 26/407 (6%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLG-----RAKYFSL------ 113
V+ L + ++ P +A +F +A QP FR S + ++ L R+ Y+ +
Sbjct: 85 VRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINA 144
Query: 114 ----IDDILIT--LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
I D+LI + SE V+ + LI +Y++ ++ ++ L F M++ P K
Sbjct: 145 NMHRIVDVLIGGCVSSE---VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 201
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
NRIL +L ++ + A +++++ + G+ P +YN ++ ++C G + L ++M
Sbjct: 202 CNRILRIL-RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
RG P+ +Y +L+ GL +K + +A L+ +ML G +Y L+ K L
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA L M +KG +P + YN+ + G C+ GR DA + L DM +N LP++VSY TL
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C G A + S P + L+ G C G+++ A + E++ G
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD-----TRIV 449
AP T+ ++V C + E +E++ ++ D TRIV
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 148/313 (47%), Gaps = 3/313 (0%)
Query: 129 TPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY IY L A++ ML N P N ++ N ++ AF
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK-AF 394
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF + P +YN ++ C G++ +A L +M G+ PD+ +Y IL+ G
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A + ++ML++G D+ +Y T + + A+ L M KG PD+
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN VV G C+ G +A ++L+ M S+G +P+ V+Y +++ + G ++
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+SKG +P LI G G+++ A E+ + G P+ T+ ++ +C
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634
Query: 427 MEKLGEVLNEIVK 439
M++ E+V+
Sbjct: 635 MDQAYNFFAEMVE 647
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 3/224 (1%)
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
GD S A++L +M +G PD+ Y +++ GLC+ + A +LL+ M++ G +PD ++Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T+++++ +LR+ ++ M KG P +V Y ++ G +GR A +M
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G LPN+++Y +L+ GLC D A + M+ KG P+ LI CN+G E
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQI---CAGEEMEKLGEVLN 435
A + +++L G P T ++ Q+ C + + +L +L+
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
++ L A L + G P +YN + C G +S A + M ++PDV
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY L+ G CR + +A L +++ + P ++Y TLL+ LCR+ +L A +L M
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PDIV Y +V G C+ G A + ++M G + +Y T + G G
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + M++KGF P + + ++ G C +G ++EA +L++++ G P T+ I
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555
Query: 418 VPQICAGEEMEKLGEVLNEIV 438
+ + K E+ E++
Sbjct: 556 IHAHLENGRLRKGREIFYEML 576
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF L + G P+ YN+++ C G++ A L KM GV+PD +Y ++
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + ++ +ML+KG P ++YT L++ K +L A+ M+ KG P
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ YN+++ G C+ R A +M G PN SY L+ C+ G + A
Sbjct: 618 NVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLY 677
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ M+ +G P AL+K K+ +A LE LL +
Sbjct: 678 KQMLDRGVQPDSCTHSALLKQLGKDCKL-QAVRQLESLLDS 717
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NRILELLVTHRNYLRPAFDLF 189
+ Y +I E L D + + F E K P L N +++ L N L A +L
Sbjct: 480 YAYATRIVGELKLGDTS-RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN-LEEASELL 537
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ GV+P+ +Y ++ A NG + +F +M +G+ P V +Y +L+ G K
Sbjct: 538 QKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGK 597
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ RA +M KG +P+ ++Y +L+N LC+ +++ +AY M KG P+ Y
Sbjct: 598 GRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY 657
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ C G +A + + M G P+ ++ L+ L
Sbjct: 658 TILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTH--RNYLRP 184
V P TY I+A +L + L+ R + E K L + L+ H + L
Sbjct: 545 VIPDYVTYTSIIHA--HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF F + G+LPN +YN ++ C + AY F +M E+G+ P+ SY IL+
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
C A+ L + ML++G PD+ +++ LL L + KL+ +L
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 192/405 (47%), Gaps = 20/405 (4%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGR---AKYFSLIDDILITL 121
V+ L ++ P++A F +A RQ F+ S +Y +++ L R + + + ++++
Sbjct: 51 VRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSV 110
Query: 122 KSEH------------YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
K E+ P + L+ IY + +L ++ L F M+ P K N
Sbjct: 111 KMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCN 170
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
R+L LL N + A +++ + G+ P +YN M+ +FC G + A L +M
Sbjct: 171 RVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQA 230
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G P+ +Y +L+ GL ++ +A +L++DML G +Y L+ C K ++ E
Sbjct: 231 MGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEE 290
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A +L M +G P +V YNT++ G C+ GR DA K+L+ M + +P+LVSY TL+
Sbjct: 291 ASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 350
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G G A + + +P + LI G C +G +D A + +E++K G P
Sbjct: 351 GYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDP 410
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD-----TRIV 449
T+ V C + E+ +E++ ++ D TRIV
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY ++ + + + AL+ M C P N ++ L +H + A
Sbjct: 198 ICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGL-SHSGEMEQA 256
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + + G+ + +Y+ ++R +C G I A L +M RG +P V +Y +M G
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V+ A LL+ M+NK +PD +SY TL+ R + EA+ L ++ + P
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ G CR G A ++ ++M +G P++ ++ T V G C G +AK+
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+++G P I G +G +A G+ EE+L G P T+ + + +
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI------D 490
Query: 426 EMEKLGEV--LNEIVK 439
+ KLG + +E+VK
Sbjct: 491 GLHKLGNLKEASELVK 506
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 130/253 (51%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
KHG P+ ++ +R FC G++ +A LF++M RG+ PD +Y + G + +
Sbjct: 405 KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 464
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+A + E+ML +GF PD ++Y ++ L + L+EA +L+ +M G PD V Y +++
Sbjct: 465 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G A + +M S G P++V+Y L+ +G +A + M KG
Sbjct: 525 HAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH 584
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ +ALI G C V K+D+A E+ G +P++ T+ +++ + C ++ +
Sbjct: 585 PNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRL 644
Query: 434 LNEIVKVEIKGDT 446
+++ EI+ D+
Sbjct: 645 YKDMLDREIQPDS 657
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 22/314 (7%)
Query: 110 YFSLID--------DILITLKSE---HYPVTPSLFTYLIKIYA---ESNLPDRALKTFRS 155
Y +LID D+ + LK E H P P +FT+ + NLP A + F
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGP-DPDVFTFTTFVRGFCKMGNLP-MAKELFDE 437
Query: 156 MLEFNCKPLP-KQLNRIL-ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML +P + RI+ EL + + AF + + G P+ +YN+ +
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPS---KAFGMQEEMLARGFPPDLITYNVFIDGLHK 494
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++ A L KM G++PD +Y ++ + +A L +ML+KG P ++
Sbjct: 495 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT L++S + +L+ A M KG +P+++ YN ++ G C+ + A +M
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G PN +Y L+ C+ G + A + + M+ + P +L+K K+
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL- 673
Query: 394 EACGVLEELLKAGE 407
LE ++ AGE
Sbjct: 674 HVVRHLENVIAAGE 687
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 147/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+++++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C G D A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + V ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 132
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI IA ++F+ + + G+ P V SY LM G R
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 252
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M KG
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 312
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ + + ++ +C +
Sbjct: 313 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAE 372
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V +K D R
Sbjct: 373 KMLREMLSVGLKPDAR 388
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C I A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD + Y T++ G C++G A + + M + V Y
Sbjct: 296 GDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-ID 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN+ ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 230 DANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD ++YTTL++ C+ L A++ RM +
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G CREG+++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 350 LDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMNG 431
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 113/235 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + ++ E G + + ILM C+ + A + + + G P +SY TL+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLM 184
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N R L E ++L M G PD+ Y+ ++ G C+E + DA ++ ++M G +
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV 244
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 245 PNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++E+ G P + T+ ++ C +++ E +++ + D + A I
Sbjct: 305 IDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALI 359
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 198/407 (48%), Gaps = 26/407 (6%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTY--LILIL---KLGRAKYFSL------ 113
V+ L + ++ P +A +F +A QP FR S + ++ IL L R+ Y+ +
Sbjct: 85 VRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINA 144
Query: 114 ----IDDILIT--LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
I D+LI + SE V+ + LI +Y++ ++ ++ L F M++ P K
Sbjct: 145 NMHRIVDVLIGGCVSSE---VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 201
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
NRIL +L ++ + A +++++ + G+ P +YN ++ ++C G + L ++M
Sbjct: 202 CNRILRIL-RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
RG P+ +Y +L+ GL +K + +A L+ +ML G +Y L+ K L
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA L M +KG +P + YN+ + G C+ GR DA + L DM +N LP++VSY TL
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C G A + S P + L+ G C G+++ A + E++ G
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD-----TRIV 449
AP T+ ++V C + E +E++ ++ D TRIV
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 148/313 (47%), Gaps = 3/313 (0%)
Query: 129 TPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY IY L A++ ML N P N ++ N ++ AF
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK-AF 394
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF + P +YN ++ C G++ +A L +M G+ PD+ +Y IL+ G
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A + ++ML++G D+ +Y T + + A+ L M KG PD+
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN VV G C+ G +A ++L+ M S+G +P+ V+Y +++ + G ++
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+SKG +P LI G G+++ A E+ + G P+ T+ ++ +C
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634
Query: 427 MEKLGEVLNEIVK 439
M++ E+V+
Sbjct: 635 MDQAYNFFAEMVE 647
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%)
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
GD S A++L +M +G PD+ Y +++ GLC+ + A +LL+ M++ G +PD ++Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T+++++ +LR+ ++ M KG P +V Y ++ G +GR A +M
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G LPN+++Y +L+ GLC D A + M+ KG P+ LI CN+G E
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQI 421
A + +++L G P T ++ Q+
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
++ L A L + G P +YN + C G +S A + M ++PDV
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY L+ G CR + +A L +++ + P ++Y TLL+ LCR+ +L A +L M
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PDIV Y +V G C+ G A + ++M G + +Y T + G G
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + M++KGF P + + ++ G C +G ++EA +L++++ G P T+ I
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555
Query: 418 VPQICAGEEMEKLGEVLNEIV 438
+ + K E+ E++
Sbjct: 556 IHAHLENGRLRKGREIFYEML 576
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 13/294 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT--FR 154
TY L+ L R + + + + +E + P + TY I + + ++ F
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINE--GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468
Query: 155 SML----EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
ML E + ++ L+L T R AF L + G P+ YN+++
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSR-----AFSLQEEMLAKGFPPDLIIYNVVVDG 523
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G++ A L KM GV+PD +Y ++ ++ + ++ +ML+KG P
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPS 583
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++YT L++ K +L A+ M+ KG P+++ YN+++ G C+ R A
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+M G PN SY L+ C+ G + A + M+ +G P AL+K
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTH--RNYLRP 184
V P TY I+A +L + L+ R + E K L + L+ H + L
Sbjct: 545 VIPDYVTYTSIIHA--HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF F + G+LPN +YN ++ C + AY F +M E+G+ P+ SY IL+
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
C A+ L + ML++G PD+ +++ LL L + KL+ +
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 175/338 (51%), Gaps = 13/338 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ ++I L + F D++ +K+ + +PS+ TY +I Y ++ +A +
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKA--WGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P N +++ N + A +F+ + G+ PN +YN ++ C N
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDEN-VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A L +KM G+ P+V +Y L+ G C+K + A ++L+D+ +G P+ +++
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL+++ + ++ +A+ L M G P++ YN +++GFCREG +A K+ ++M
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKY---MQLMISKGFSPHFSVSHALIKGFCNVGK 391
NG +LV+Y LV LC +G A + M LM KG + + LIKGFCN GK
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
++EA +L E+L+ G P+ T+ I E MEK
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTY-----DILRDEMMEK 560
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A D+ + G P+ +YN ++ +C G + A L +M + + P+ ++ I
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CR V A + E+M +G P+ ++Y +L+N LC KL EA L +M G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YN ++ GFC++ +A ++L+D+ G PN++++ TL+ G D A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+M+ G P+ S + LI GFC G V EA + +E+ G T+ ++V +
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 422 CAGEEMEKLGEVLNEIVKVEIKG 444
C E K +L+E+ +E KG
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKG 507
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 125/234 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + F A +G + S N M+ + G I + +++ +M R + +V ++ +++
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + +A D++EDM GF P ++Y T+++ C+ K+ +A LL M K +P
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + +N ++ GFCR+ A KV E+M G PN+V+Y +L+ GLC G D A
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M G P+ +ALI GFC + EA +L+++ K G AP+ T+ ++
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 179/398 (44%), Gaps = 18/398 (4%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-KS 123
+Q L S++ P L F + ++ H+ + L+ L AK ++ I +L + K+
Sbjct: 77 LQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKN 136
Query: 124 EHYP----------------VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
HY + L+ Y ++ D AL+ F ++ +
Sbjct: 137 AHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS 196
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N +L LV + ++K + + N ++++++ C G A + M
Sbjct: 197 CNPMLVSLV-KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G P V +Y ++ G C+ ++ +A LL++M+ K P+ +++ L++ CR + +
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
A K+ M+ +G P++V YN+++ G C G+ +A + + M G PN+V+Y L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C + M A++ + + +G +P+ + LI + G++D+A + +L G
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
P+ T+ ++ C +++ ++ E+ +K D
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 6/233 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY LI + D AL M KP N ++ + L+ A
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK-MLKEA 388
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ K G+ PN ++N ++ A+ G + A+ L + M + GV P+V +Y L+ G
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV---KGC 302
CR+ V A L ++M G D ++Y L+++LC+K + R+A +LL M + KG
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGR 508
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+IV YN ++ GFC +G+ +A ++L +M G +PN +Y L + ++G
Sbjct: 509 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI Y ++ D A ML+ P N ++ N ++ A
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN-VKEA 458
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF---ERGVMPDVESYRIL 242
L K +G+ + +YNI++ A C G+ A L ++M ++G ++ +Y +L
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVL 518
Query: 243 MQGLCRKSQVNRAVDLLEDMLNK-------------------GFVPD 270
++G C K ++ A LL +ML K GF+PD
Sbjct: 519 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 3/300 (1%)
Query: 144 NLPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
NL D ALK F M E C P + ++ L L AF L + G P+T+
Sbjct: 245 NLRD-ALKVFDLMSREGTCAPNSVSYSILIHGL-CEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y ++++A C G I A+ LF++M RG P+V +Y +L+ GLCR ++ A + M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ G P ++Y L+N C+ ++ A++LL M+ + C P++ +N ++ G CR G+
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +L+ M NG P++VSY L+ GLC +G +VA K + M S P A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I FC GK D A L +L+ G + E T ++ +C + +L +VK+ +
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 8/344 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDI-LITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALKTF 153
++++ L LG + +L D + + L S P+ +Y I I+ E + A
Sbjct: 230 SHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLK 289
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M E C+P + +++ L R + AF+LF G PN +Y +++ C
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKAL-CDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCR 348
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+G I A + KM + G+ P V +Y L+ G C+ +V A +LL M + P+ +
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ L+ LCR K +A LL RM G +PDIV YN ++ G CREG A K+L M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
S P+ +++ ++ C QG DVA ++ LM+ KG S LI G CNVGK
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAG----EEMEKLGEV 433
+A +LE L+K + +I+ + G EE+ LG++
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKI 572
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 175/439 (39%), Gaps = 116/439 (26%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGR-AKYFSLIDDILITLKSEHYPVTPSLF 133
A ++FD SR+ ++ +Y ILI ++GR + F L D + PS
Sbjct: 249 ALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM------GEKGCQPSTR 302
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKP-------LPKQLNR-------------- 170
TY LIK + L D+A F M+ CKP L L R
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 171 ----ILELLVTHRNYLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
I ++T+ + PAF+L K PN +++N +M C G
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM--------------- 262
A L +M + G+ PD+ SY +L+ GLCR+ +N A LL M
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482
Query: 263 --------------------LNKGFVPDTLSYTTLLNSLCRKKKLREAY---KLLCRMKV 299
L KG D ++ TTL++ +C K R+A + L +M++
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542
Query: 300 ---------------KGCN-----------------PDIVHYNTVVLGFCREGRAIDACK 327
KGC P +V Y T+V G R G + +
Sbjct: 543 LTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFR 602
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+LE M +GCLPN+ Y ++ GLC G + A+K + M G SP+ ++KG+
Sbjct: 603 MLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 388 NVGKVDEACGVLEELLKAG 406
N GK+D A + +++ G
Sbjct: 663 NNGKLDRALETVRAMVERG 681
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV-MPDVESYRILMQGLCRKSQV 252
K G L ++ ++ FC ++ A +F+ M G P+ SY IL+ GLC ++
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L + M KG P T +YT L+ +LC + + +A+ L M +GC P++ Y +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR+G+ +A V M +G P++++Y L+ G C G A + + +M +
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ + L++G C VGK +A +L+ +L G +P ++ +++ +C M +
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYK 462
Query: 433 VLNEIVKVEIKGD 445
+L + +++ D
Sbjct: 463 LLTSMNSFDLEPD 475
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+AY + +M G + + YR ++ LC+ A + +L GF+ D+ T+LL
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLL 237
Query: 279 NSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
CR LR+A K+ M +G C P+ V Y+ ++ G C GR +A + + M GC
Sbjct: 238 LGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y L+ LCD+G+ D A MI++G P+ LI G C GK++EA G
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
V +++K G P T+ ++ C + E+L + K K + R
Sbjct: 358 VCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 161/382 (42%), Gaps = 77/382 (20%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L++ P +A+ + ML+ P N +++ L ++ A+ L S
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL-CREGHMNVAYKLLTSM 467
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ + P+ ++ ++ AFC G +A M +G+ D + L+ G+C +
Sbjct: 468 NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT 527
Query: 253 NRAVDLLE------------------DMLNKG-----------------FVPDTLSYTTL 277
A+ +LE DML+KG VP ++YTTL
Sbjct: 528 RDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ L R + ++++L MK+ GC P++ Y ++ G C+ GR +A K+L M +G
Sbjct: 588 VDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF----------- 386
PN V+Y +V G + G D A + ++ M+ +G+ + + +L++GF
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETD 707
Query: 387 -----------------------------CNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
C G+ DE+ G+++ +LK+G E +I
Sbjct: 708 PECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSG-VFLEKAIDII 766
Query: 418 VPQICAGEEMEKLGEVLNEIVK 439
+ C+ ++ K E++ ++K
Sbjct: 767 MESYCSKKKHTKCVELITLVLK 788
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 54/303 (17%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL ++++ P LN IL++L + L+ + +K G++P+ +Y ++
Sbjct: 530 ALFILETLVKMRMLTTPHSLNVILDML-SKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+GDIS ++ + M G +P+V Y I++ GLC+ +V A LL M + G
Sbjct: 589 DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++YT ++ KL A + + M +G + Y++++ GF + I
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIR---- 704
Query: 329 LEDMPSNGCLPNLVSYRTLVGG------------LCDQGMFDVAKKYMQ----------- 365
E P C+ L+S +GG LC +G D + +Q
Sbjct: 705 -ETDPE--CIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEK 761
Query: 366 -----------------------LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
L++ GF P F +I+G G + A ++ EL
Sbjct: 762 AIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMEL 821
Query: 403 LKA 405
L +
Sbjct: 822 LTS 824
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V+P+ TY ++K Y + DRAL+T R+M+E + + + +L V + +R
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRET 706
Query: 186 -----FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L + G + ++ R C G + L + + GV + ++
Sbjct: 707 DPECIKELISVVEQLGGSTSGLCIFLVTR-LCKEGRTDESNGLVQTILKSGVFLE-KAID 764
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
I+M+ C K + + V+L+ +L GFVP S+ ++ L ++ A +L+
Sbjct: 765 IIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELV 818
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 7/330 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCK-PLPKQLNRILELLVTHRNYLRPAFDLFKS 191
F L+K + +S +A+ F M++ NC P N ++ L + L A +LFK
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLF-CMMKRNCLIPDCVSYNTVINGLCKGKR-LVEAKELFKE 189
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
PN+ +++ ++ FC NGD+ + L +M + G+ DV Y L+ G C K
Sbjct: 190 MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGD 249
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ R +L +ML K P+ ++Y+ L+N+LC+K+K +EA ++L M PD+V Y
Sbjct: 250 IERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTV 309
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ G + GRA DA KVL+ M G PN V+Y ++ GLC +G D A ++ M KG
Sbjct: 310 LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV--MIVPQICAGEEMEK 429
P L+KG C VGK+DEA +L L+ D + +++ ++C +
Sbjct: 370 KKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429
Query: 430 LGEVLNEIVKVEIKGDTRIVEAGIGLEDYL 459
V + VE + IV I ++ YL
Sbjct: 430 AKRVYYTM--VERGFPSNIVTYNILIDGYL 457
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 40/332 (12%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSY 204
D + M + P L+ ++E V N +P AF + K G N ++
Sbjct: 76 DHVISVHSKMASVSVFPCFTSLSALIESFV---NTQKPSFAFGVLGLIMKRGFHLNVYNF 132
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N++++ FC +GD A LF M ++PD SY ++ GLC+ ++ A +L ++M
Sbjct: 133 NLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKG 192
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---- 320
P++++++ L++ C+ + E + LL M+ G D+ Y+ ++ GFC +G
Sbjct: 193 GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIER 252
Query: 321 -------------------------------RAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
+ +A ++L+ M P++V+Y L
Sbjct: 253 GKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLAD 312
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GL G A K + LM+ +G P+ +A+I G C G+VD+A G+LE + K G+ P
Sbjct: 313 GLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP 372
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
T+ +V +C ++++ ++LN ++ E
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 160/347 (46%), Gaps = 6/347 (1%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K GRA + D+++ E VT + +I + D AL +M + KP
Sbjct: 316 KNGRASDAIKVLDLMVKRGEEPNNVT---YNAIINGLCKEGRVDDALGILETMAKKGKKP 372
Query: 164 LPKQLNRILELL--VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
+ +++ L V + +L S H + P+ ++N++++ C + A
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH-IKPDVFAFNLVIQELCKQRRLRHAK 431
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
++ M ERG ++ +Y IL+ G ++ +A++L +D ++ G P+ +YT L+N L
Sbjct: 432 RVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + L A L + + G P + YNT++ CRE A + ++M + P++
Sbjct: 492 CKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDV 551
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
VS+ ++ G G + AK+ + M++ P LI F +G++DEA + E
Sbjct: 552 VSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYER 611
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ G P + ++ + EK+ +L ++ ++ D+++
Sbjct: 612 MVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKL 658
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 134/281 (47%), Gaps = 9/281 (3%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NR 170
D+L L S+ + + P +F + +I+ + A + + +M+E + P + N
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVE---RGFPSNIVTYNI 451
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ ++ L A +L+K A G+ PN +Y +++ C +SIA LFNK
Sbjct: 452 LIDGYLS-AGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G P V Y LM LCR+S V +A +L ++M N PD +S+ +++ + + A
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M PD + ++ ++ F + G+ +A + E M S G +P+ V + +L+ G
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+G + +Q M K ++ ++ CN+ K
Sbjct: 631 YSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%)
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
+P S L+ L + + + + M + P S + L+ S +K A+
Sbjct: 56 IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+L + +G + ++ ++N ++ GFC+ G + A + M N +P+ VSY T++ GLC
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
AK+ + M P+ ALI GFC G V+E G+LEE+ K G
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ ++ C+ ++E+ E+ NE+++ +
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNV 265
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 88/245 (35%), Gaps = 36/245 (14%)
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
T+ +P + LI Y + +AL+ ++ ++ P ++ L +
Sbjct: 436 TMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQ 495
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A LF G P YN +M + C + A LF +M PDV S+
Sbjct: 496 -MLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSF 554
Query: 240 RILMQGLCRKS-----------------------------------QVNRAVDLLEDMLN 264
I++ G + Q++ A L E M++
Sbjct: 555 NIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVS 614
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G VPD + + +LL K K + +L +M K D +T++ C + +D
Sbjct: 615 CGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVD 674
Query: 325 ACKVL 329
K+L
Sbjct: 675 IEKIL 679
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY +LI L + + S+ + ++ T S + L+ + ++A F+
Sbjct: 482 ATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQE 541
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M N P N I++ + + + A +L ++P+ +++I++ F G
Sbjct: 542 MRNANHDPDVVSFNIIIDGTLKAGD-VESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A +L+ +M G +PD + L++G K + + V +L+ M +K V D+ +
Sbjct: 601 QLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTS 660
Query: 276 TLLNSLCRKKKLREAYKLL 294
T+L LC K + K+L
Sbjct: 661 TILACLCNMSKDVDIEKIL 679
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P S TL+++L + K + +M P + ++ F + A
Sbjct: 56 IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL + G N+ ++ L+ G C G A +M P + +I G C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175
Query: 388 NVGKVDEACGVLEELLKAGEA-PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ EA + +E +K GE P+ T+ ++ C ++E+ +L E+ K+ ++GD
Sbjct: 176 KGKRLVEAKELFKE-MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234
Query: 447 RIVEAGI 453
+ A I
Sbjct: 235 FVYSALI 241
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 211/443 (47%), Gaps = 23/443 (5%)
Query: 8 RSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQK 67
+ + + +T+ P K LIF ++ QE P + Q S S I P + +
Sbjct: 57 KHTTVESTIQSIAVAPYK--DLIF---NTIQEKPWAFCNQNWVS-DKFNSVITDPQLLIR 110
Query: 68 LIAS-QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
++ S + P +A F QP F+ S + IL++ L+D+ L +KS ++
Sbjct: 111 VLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCA-ILQI-------LVDNCL--MKSAYW 160
Query: 127 PVTPSLFTY----LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
V + ++ ++ + L + L F M+ P K NRIL++L +N L
Sbjct: 161 -VMERIISFEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKIL-RDKNLL 218
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A ++++ ++G+ P +YN M+ +FC G++ A L KM ERG P ++ +L
Sbjct: 219 VKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVL 278
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GL +K ++ +A L+++M G +Y L+ C+K L EA L M +G
Sbjct: 279 INGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGV 338
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+P + +NT++ GFC+EG+ DA + L DM +P+++SY TL+ G C G A
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI 398
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + + S + + LI G C +G ++ A + E+++ G P T+ ++V C
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
M E +E++ V + D
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPD 481
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 172/340 (50%), Gaps = 4/340 (1%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEF 159
ILK+ R K L+ + + Y + P++ TY ++ + + RAL M E
Sbjct: 208 ILKILRDKNL-LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQER 266
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
C P N ++ L + + L+ A L + K G+ + +YN ++ +C G +
Sbjct: 267 GCYPSEVTFNVLINGL-SKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVE 325
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L+ +M RGV P V S+ +M G C++ +++ A L DML K +PD +SY TL+
Sbjct: 326 ALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIY 385
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR + EA+ LL ++ + + +IV YNT++ G CR G A K+ EDM + G P
Sbjct: 386 GFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHP 445
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y LV G C G +AK++ M+ G +P A I G +G +A +
Sbjct: 446 DVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQ 505
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EE+L G P T+ + V +C +E+ GE+L ++++
Sbjct: 506 EEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIR 545
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ P+ +Y +++ C G++ +A F++M G+ PD +Y
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ G + +A L E+ML KGF PD ++Y +N LC+ L EA +LL +M G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y + + G + ++ DM S G P +V+Y L+ G D A
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAM 607
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Y M KG P+ + LI GFC V K+D+AC E+ + G P++ T+ +++ +
Sbjct: 608 AYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINEN 667
Query: 422 CAGEEMEKLGEVL 434
C M K E L
Sbjct: 668 C---NMGKWQEAL 677
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 119/236 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ L A L++ GV P S+N +M FC G +S A + M ++ +MPD+ S
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G CR + A LL+++ + + ++Y TL++ LCR L A KL M
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+G +PD+V Y +V G C+ G + A + ++M G P+ +Y + G G
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A K + M++KGF P + + G C +G ++EA +L+++++ G P T+
Sbjct: 500 KAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + F G+ P+ +Y + GD + A+ L +M +G PDV +Y + +
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + A +LL+ M+ G VPD ++YT+ +++ LRE ++ M +G P
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y ++ GR A +M G +PN+++Y L+ G C D A K+
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
M KG P+ LI CN+GK EA + ++L
Sbjct: 646 IEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQML 684
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF L + G P+ +YN+ + C G++ A L KM G +PD +Y M
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ ++ DML++G P ++YT L+++ +L A M+ KG P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ YN ++ GFC+ + ACK +M G PN +Y L+ C+ G + A +
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
M+ K P AL+K KV +A +E L+ G+
Sbjct: 681 AQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESLILDGD 722
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 97 TYLILI---LKLGR---AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
TY +L+ KLG AK F D++L H + P F Y +I E L D A
Sbjct: 449 TYTVLVNGACKLGNMLMAKEF--FDEML------HVGLAPDQFAYTARIVGELKLGDTA- 499
Query: 151 KTFRSMLEFNCKPLPKQL---NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
K F+ E K P + N + L N L A +L + + G +P+ +Y
Sbjct: 500 KAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN-LEEAGELLQKMIRDGHVPDHVTYTSF 558
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
M A NG + +F M RG P V +Y +L+ +++ A+ +M KG
Sbjct: 559 MHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGV 618
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VP+ ++Y L+N C+ +K+ +A K M+ KG P+ Y ++ C G+ +A +
Sbjct: 619 VPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALR 678
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGL 351
+ M P+ ++ L+ L
Sbjct: 679 LYAQMLGKRIRPDSCTHGALLKKL 702
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 76 LLAKEIFD---YASRQPNFRHSNSTYLILILKLG-RAKYFSLIDDILITLKSEHYPVTPS 131
L+AKE FD + P+ + + + ++ LKLG AK F L +++L ++ +P P
Sbjct: 464 LMAKEFFDEMLHVGLAPD-QFAYTARIVGELKLGDTAKAFKLQEEML----TKGFP--PD 516
Query: 132 LFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
+ TY + + L + A + + M+ P + + + +LR ++F
Sbjct: 517 VITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMEN-GHLREGREIF 575
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
G P +Y +++ A NG + A F +M E+GV+P+V +Y +L+ G C+
Sbjct: 576 YDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKV 635
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
++++A +M KG P+ +YT L+N C K +EA +L +M K PD
Sbjct: 636 RKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPD 691
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 3/240 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN M+ +C G + A L +M V PD +Y L++GLC + + A+ +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++ML + VPD ++YT LL + C++ ++A KLL M+ KGC PDIV YN VV G C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EGR DA + L+++PS GC PN VSY ++ GLC ++ A++ M M KG P+
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI C G V+ A VLE++ K G P+ ++ ++ C ++M+K L+ +V
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 145/296 (48%), Gaps = 4/296 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD + LK+ Y P+ +Y ++K + + A + M + C P N
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + + PA ++ + K+G PN+ SYN ++ AFC + A + M R
Sbjct: 304 LISFLC-RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ AV+LL + +KG P +SY T+++ L + K +EA
Sbjct: 363 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 422
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CRE R DA + + G PN V Y ++ G
Sbjct: 423 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 482
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
LC + A MI G P+ S LI+G G + EA +L+EL G
Sbjct: 483 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 153/285 (53%), Gaps = 5/285 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + +P+ +Y I++ A C A L ++M ++G PD+ +Y +++
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+C++ +V+ A++ L+++ + G P+T+SY +L LC ++ +A +L+ M KGC P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +N ++ CR+G A +VLE +P GC PN +SY L+ C Q D A ++
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-A 423
LM+S+G P + L+ C G+VD A +L +L G AP ++ ++ + A
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLEDYLIGKTRS 465
G+ E L E+LNE+V ++ D + AG+ ED + R+
Sbjct: 417 GKTKEAL-ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 460
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 13/336 (3%)
Query: 97 TYLILILKL---GR-AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RAL 150
TY LI L GR A +++D++L P + TY I + A +A+
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEML------RRRCVPDVVTYTILLEATCKRSGYKQAM 213
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K M + C P N ++ + + A + K+ +G PNT SYNI+++
Sbjct: 214 KLLDEMRDKGCTPDIVTYNVVVNG-ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 272
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A L +M ++G P+V ++ +L+ LCRK V A+++LE + G P+
Sbjct: 273 LCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPN 332
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+LSY LL++ C++KK+ +A L M +GC PDIV YNT++ CR G A ++L
Sbjct: 333 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 392
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ GC P L+SY T++ GL G A + + M+SKG P + G C
Sbjct: 393 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 452
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
++++A ++ G P+ + I+ +C E
Sbjct: 453 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 488
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 3/329 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY LI+ AL ML C P +LE Y +
Sbjct: 153 PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY-KQ 211
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L G P+ +YN+++ C G + A + G P+ SY I+++
Sbjct: 212 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 271
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A +L+ +M KG P+ +++ L++ LCRK + A ++L ++ GC P
Sbjct: 272 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 331
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN ++ FC++ + A L+ M S GC P++VSY TL+ LC G DVA + +
Sbjct: 332 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 391
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ KG +P + +I G GK EA +L E++ G P T+ I +C
Sbjct: 392 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 451
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ +E ++ + I+ +T + A I
Sbjct: 452 DRIEDAIRAFGKVQDMGIRPNTVLYNAII 480
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 172/331 (51%), Gaps = 3/331 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY ++ + D A++ +++ + C+P N +L+ L T + A
Sbjct: 225 TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW-EDAE 283
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L + G PN ++N+++ C G + A + ++ + G P+ SY L+
Sbjct: 284 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++++A+ L+ M+++G PD +SY TLL +LCR ++ A +LL ++K KGC P +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L +M S G P++++Y T+ GLC + + A +
Sbjct: 404 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 463
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G P+ + +A+I G C + A + ++ G P+E T+ +++ +
Sbjct: 464 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 523
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
+++ ++L+E+ + + I + I L D
Sbjct: 524 IKEARDLLDELCSRGVVRKSLINKGAIRLLD 554
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 41/227 (18%)
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++ L R+ +++ A+ L+ PD + L+ L + EA ++L C
Sbjct: 72 LRSLVRRGELDEALRLV----GSARRPDAGTCAALIKKLSASGRTAEARRVL-----AAC 122
Query: 303 NPDIVHYNTVVLGF--------------------------------CREGRAIDACKVLE 330
PD++ YN +V G+ C GR +A VL+
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLD 182
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M C+P++V+Y L+ C + + A K + M KG +P + ++ G C G
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+VD+A L+ L G P+ ++ +++ +C E E E++ E+
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 154 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 213
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ RM +
Sbjct: 214 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQS 273
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 274 LLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAF 333
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P+ T+ MI+ +
Sbjct: 334 EHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEF 393
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 394 CKKGDVWKGSKLLKEM 409
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 113 LMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 172
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 173 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 231
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 232 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKK 291
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 292 GDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAY 351
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P+ +I FC G V + +L+E+ +
Sbjct: 352 TALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQR 411
Query: 405 AGEAP 409
G P
Sbjct: 412 DGHVP 416
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 167 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 225
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 226 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLI 285
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 286 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIX 345
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G PN +Y ++ C +G K
Sbjct: 346 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKL 405
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 406 LKEMQRDGHVPSVVTYNVLMNG 427
>gi|90399325|emb|CAJ86125.1| H0313F03.9 [Oryza sativa Indica Group]
Length = 466
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 178/345 (51%), Gaps = 14/345 (4%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP + K+ A+ DP L F A + +++ + + Y ++I +L + FS ++++L
Sbjct: 37 SPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEVLAR 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++E + + F LIK+Y +N P +A++T +M +NC P K N +L +LV R
Sbjct: 97 ARAESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKR 156
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
Y +++ SA + GV +T +NI+++ C G A +L +M ++G +P+V +Y
Sbjct: 157 QY-EVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTY 215
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM LC+ QV++A +L E M + D + Y L++ LCR++++ EA+ L M
Sbjct: 216 STLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVP 275
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD------ 353
KGC P+ Y ++ G G+ ++A ++ M + P S++ L+ GLC
Sbjct: 276 KGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDD 335
Query: 354 -----QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC-NVGKV 392
+ M + A Y L+++K FS V A I C +GKV
Sbjct: 336 AHLVLKQMVEQAWDYWGLIMAKTFSLGLYVISANIDWDCVKLGKV 380
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+A++ L M P T ++ +L+ L K++ +++ G D +N +
Sbjct: 124 QKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNIL 183
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V G C+ G+ DA +L +MP GC+PN+ +Y TL+ LC G D A + + M +
Sbjct: 184 VKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDI 243
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKLG 431
+ V + LI G C +V EA + + ++ G P+ T+ V++ + +G+ +E G
Sbjct: 244 AADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKG 303
Query: 432 EV 433
V
Sbjct: 304 LV 305
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAI 323
+ + P+ Y+ +++ L ++ + ++L R + + D Y + +
Sbjct: 65 RDYKPNEALYSLMIDRLASCRRFSDVEEVLARARAESFRFSDEFFYRLIKMYGNVANHPQ 124
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A + L MP C P+ ++ ++ L + ++V + G + + L+
Sbjct: 125 KAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILV 184
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
KG C GK D+A +L E+ K G P+ T+ ++ +C +++K E+ + K +I
Sbjct: 185 KGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIA 244
Query: 444 GDTRI 448
D +
Sbjct: 245 ADAVV 249
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 181/351 (51%), Gaps = 15/351 (4%)
Query: 97 TYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY ILI L+ G + L+D++L + P +FTY +I+ + + DRA
Sbjct: 226 TYTILIEATMLEGGVDEALKLLDEML------SRGLKPDMFTYNTIIRGMCKEGMVDRAF 279
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ R++ C+P N +L L+ + L PN +Y+I++
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKW-EEGEKLMTKMFSEKCDPNVVTYSILITT 338
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G I A L M E+G+ PD SY L+ CR+ +++ A++ LE M++ G +PD
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 398
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y T+L +LC+ K +A ++ ++ GC+P+ YNT+ G I A ++
Sbjct: 399 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 458
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M SNG P+ ++Y +++ LC +GM D A + + M S F P + ++ GFC
Sbjct: 459 EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 518
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVKV 440
++++A VL+ ++ G P+E T+ +++ I AG E + E+ N++V++
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM-ELANDLVRI 568
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 159/319 (49%), Gaps = 5/319 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F Y LI + + N D A + M + P N ++ L + R L A
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-RGKLDLALK 210
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ P +Y I++ A G + A L ++M RG+ PD+ +Y +++G+C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V+RA +++ ++ KG PD +SY LL +L + K E KL+ +M + C+P++V
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ CR+G+ +A +L+ M G P+ SY L+ C +G DVA ++++ M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEE 426
IS G P + ++ C GK D+A + +L + G +P+ ++ M +G++
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450
Query: 427 MEKLGEVLNEIVKVEIKGD 445
+ L +L E+V I D
Sbjct: 451 IRALHMIL-EMVSNGIDPD 468
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 163/333 (48%), Gaps = 8/333 (2%)
Query: 114 IDD---ILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQL 168
IDD +L ++S+ + +P TY I I + D ALK +L NC+P
Sbjct: 170 IDDATRVLDRMRSKDF--SPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITY 227
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
++E + + A L G+ P+ +YN ++R C G + A+ + +
Sbjct: 228 TILIEATMLEGG-VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLE 286
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+G PDV SY IL++ L + + L+ M ++ P+ ++Y+ L+ +LCR K+
Sbjct: 287 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 346
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA LL MK KG PD Y+ ++ FCREGR A + LE M S+GCLP++V+Y T++
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC G D A + + G SP+ S + + + G A ++ E++ G
Sbjct: 407 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGID 466
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
P E T+ ++ +C ++K E+L ++ E
Sbjct: 467 PDEITYNSMISCLCREGMVDKAFELLVDMRSCE 499
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 122/221 (55%), Gaps = 3/221 (1%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ E+ PDV +Y L+ G C+ ++++ A +L+ M +K F PDT++Y ++ SLC +
Sbjct: 144 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
KL A K+L ++ C P ++ Y ++ EG +A K+L++M S G P++ +Y
Sbjct: 204 KLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYN 263
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
T++ G+C +GM D A + ++ + KG P + L++ N GK +E ++ ++
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ T+ +++ +C ++E E +N + ++ KG T
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIE---EAMNLLKLMKEKGLT 361
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR ++ LLE M+ KG+ PD + T L+ + + +A +++ ++ G PD+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ GFC+ R DA +VL+ M S P+ V+Y ++G LC +G D+A K +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
++S P LI+ G VDEA +L+E+L G P T+ I+ +C
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 427 MEKLGEVLNEIVKVEIKG 444
+++ E+ I +E+KG
Sbjct: 275 VDRAFEM---IRNLELKG 289
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 178/354 (50%), Gaps = 7/354 (1%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKS--EHYPVTPSLFTY--LIKIYAESNLPD 147
R S+ + + +L ++ ++ D++ L+ Y TP+ Y LIK Y ++ +
Sbjct: 146 RVSHKALAVCLDRLVSSRCPDVLSDLIADLRDPRNKYLPTPNTCVYNILIKHYVKNGDSE 205
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLFKSA-HKHGVLPNTKSY 204
A + M E+ C + L L+ + ++ AF+LF+ K ++P+ +Y
Sbjct: 206 TAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTY 265
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N+++ FC G + A T+F M + P+ +Y LM G RK ++ + E+M +
Sbjct: 266 NVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEEMKS 325
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD +SYT L+ LCR + E L+ M+ KGC D+V YN ++ G C++ R ++
Sbjct: 326 AGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVE 385
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L +P G N+ SYR ++ LC G + A + LM+ +GF PH++ S+ L+
Sbjct: 386 AMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASNDLLI 445
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G C VG+V +A L L G P W +V +C ++ + E+L+ ++
Sbjct: 446 GLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRSVELLDVLI 499
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 182/375 (48%), Gaps = 15/375 (4%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
+ +LIAS A ++F+ A+ Q F H+ +T+ L+++L RA+ S IL S
Sbjct: 51 LARLIASSDSGQRALDLFNAAAGQRGFSHTAATFSALLIRLARARLPSAAAAILRRAAS- 109
Query: 125 HYP---VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR-- 179
P + P L + + L AL F L + K L L+ LV+ R
Sbjct: 110 -MPCRFLEPHFLPLLRLLPPDHAL---ALLRFLPSLLRRRRVSHKALAVCLDRLVSSRCP 165
Query: 180 NYLRPAF-DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER---GVMPD 235
+ L DL +K+ PNT YNI+++ + NGD A+ + ++M E V P+
Sbjct: 166 DVLSDLIADLRDPRNKYLPTPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPN 225
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ +Y L+ GLCR ++ A +L E+M+ K VPD L+Y ++N CR ++ +A +
Sbjct: 226 LVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIF 285
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ C P+ +Y T++ G R+G + V E+M S G P+ VSY L+G LC
Sbjct: 286 GFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRH 345
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D ++ M KG + LI+G C ++ EA +L L G + ++
Sbjct: 346 GSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEAMDLLRSLPLEGVQLNVASY 405
Query: 415 VMIVPQICAGEEMEK 429
+++ +C+ +MEK
Sbjct: 406 RIVMNSLCSCGDMEK 420
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 193/413 (46%), Gaps = 52/413 (12%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+AS + ++A F++A FRH Y+ L K F +++
Sbjct: 86 LASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVM---------- 135
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
++K +AE A++ M P K LN ++++ VT + A +L
Sbjct: 136 -----QCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKI-VTEMGLVEYAENL 189
Query: 189 FKSAHKHGVLPNTKSYNIMM-----------------------------------RAFCF 213
F GV PN SY +M+ R FC
Sbjct: 190 FDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCE 249
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G ++ A F + E G+ P++ ++ +++GLC++ V +A ++LE+M+ +G+ P+ +
Sbjct: 250 KGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYT 309
Query: 274 YTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+T L++ LC+K +A++L ++ + + P+++ Y ++ G+CR+ + A +L M
Sbjct: 310 HTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRM 369
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN +Y TL+ G C G F+ A + M +M +GFSP+ +A++ G C G+V
Sbjct: 370 KEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRV 429
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
EA VL+ + G + T+ +++ + C E+++ + N++VK I+ D
Sbjct: 430 QEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPD 482
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ PNT +Y ++ C G+ AY L N M E G P+V +Y ++ GLC
Sbjct: 365 LLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLC 424
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K +V A +L+ G D ++YT L++ C++ ++++A L +M G PDI
Sbjct: 425 KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIH 484
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T++ FCRE R ++ E+ G +P +Y +++ G C +G +A K+ M
Sbjct: 485 SYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G + ALI G C K+DEA + + +++ G P E T V + + C
Sbjct: 545 SDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC 599
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++SE++ +T +I Y +RA M E P +++ N
Sbjct: 334 VRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGN 393
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ R A++L ++ G PN +YN ++ C G + AY + F G+ D +Y
Sbjct: 394 FER-AYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYT 452
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ C+++++ +A+ L M+ G PD SYTTL+ CR+K+++E+
Sbjct: 453 ILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRF 512
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P Y +++ G+CREG A K M +GC + ++Y L+ GLC Q D A
Sbjct: 513 GLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEA 572
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG---VLEELLK 404
+ MI KG +P L +C K+D+ C VLE L K
Sbjct: 573 RCLYDAMIEKGLTPCEVTRVTLAYEYC---KIDDGCSAMVVLERLEK 616
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 39/319 (12%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R N + + TY +I R + + + +L +K + + +T LI + ++
Sbjct: 335 RSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNF 394
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+RA + M E P N I++ L + ++ A+ + KS ++G+ + +Y I
Sbjct: 395 ERAYELMNVMNEEGFSPNVCTYNAIVDGLCK-KGRVQEAYKVLKSGFRNGLDADKVTYTI 453
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C +I A LFNKM + G+ PD+ SY L+ CR+ ++ + E+ + G
Sbjct: 454 LISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFG 513
Query: 267 FVP-----------------------------------DTLSYTTLLNSLCRKKKLREAY 291
VP D+++Y L++ LC++ KL EA
Sbjct: 514 LVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEAR 573
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M KG P V T+ +C+ A VLE + + + TLV L
Sbjct: 574 CLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTV---NTLVRKL 630
Query: 352 CDQGMFDVAKKYMQLMISK 370
C + +A + ++ K
Sbjct: 631 CSERKVGMAALFFHKLLDK 649
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 185/374 (49%), Gaps = 18/374 (4%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTY---LILILKLGRA-KYFSLIDDILITLKSEHYP 127
S P LA + FD+A Q ++H +Y L +++K G + + D+L H
Sbjct: 4 SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLL------HSG 57
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+P+L T+ LI+ ++ RAL+ R++ EF+ P N ++ L N A
Sbjct: 58 CSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNP-DQA 116
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRILM 243
LF++ V P +YN ++ C +G++ A L +M +G PD+ +Y L+
Sbjct: 117 VKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLI 176
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
R S++ A E M G PD L+ L++ +C+ + EA ++L MK+ G
Sbjct: 177 NAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV 236
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD++ YN+++ C G+ ++A ++L+ M C P+LV++ TL+ G C GM A +
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEV 293
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ M + P L+ G C VG+V A +LEE+++ G P + +V +C
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353
Query: 424 GEEMEKLGEVLNEI 437
E+E+ +++ E+
Sbjct: 354 SGEIEEAHKLVKEM 367
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 130/224 (58%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ ++N ++ FC G + A + +M ++PDV +Y IL+ GLCR QV A L
Sbjct: 269 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 328
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
LE+++ +G++PD ++YT+L++ LC+ ++ EA+KL+ M V+GC +V Y+++V G+CR
Sbjct: 329 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR 388
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G A ++L +M S +P L +Y ++GGL G A + ++++G+ P
Sbjct: 389 AGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ LI G C +V EAC + +E+ G P++ T +V +C
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 157/319 (49%), Gaps = 17/319 (5%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP-------LPKQLNRILELLVTHR 179
+P L T+ L+ + ++ + RAL+ M N P L L R+ ++ V
Sbjct: 268 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV--- 324
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
AF L + + G +P+ +Y ++ C +G+I A+ L +M RG V Y
Sbjct: 325 -----AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ G CR V++A ++L +M++ VP +Y +L L + + +A L+ +
Sbjct: 380 SSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 439
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD+V YNT++ G C+ R +AC + ++M S GC PN V+ ++V GLC G D
Sbjct: 440 RGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDD 499
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M K +P+ V +LI G C ++D+AC VL+ + G A + + ++
Sbjct: 500 AWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIV 559
Query: 420 QICAGEEMEKLGEVLNEIV 438
+ G + + + +E+V
Sbjct: 560 SMSHGGRVAEAMAMYDEMV 578
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 7/307 (2%)
Query: 143 SNLPDRALKTFRSMLEFNC-KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
S+ PD A++ F E + K N +L++LV ++ R ++K G PN
Sbjct: 4 SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTG-KVYKDLLHSGCSPNL 62
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
++ I++R C G A + E V PDV + +L+ GL + ++AV L E+
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGFCRE 319
M + P+ ++Y T+++ LC+ L +A +LL M KG PDIV YNT++ F R
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
R +AC E M + G P++++ LV G+C G + A + + M G P
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+++I C GKV EA +L+ + +P T+ ++ C + + EVL E+ +
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299
Query: 440 VEIKGDT 446
I D
Sbjct: 300 ENILPDV 306
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 1/286 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY IL+ L R + +L + + Y +T L+ +S + A K + M
Sbjct: 308 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 367
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C+ + ++ N + A ++ ++P +YNI++ +G
Sbjct: 368 SVRGCRTGVVMYSSLVSGYCRAGN-VHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 426
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
IS A +L + + RG +PDV +Y L+ GLC+ ++V A DL ++M ++G P+ ++ +
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ LCR ++ +A+ L+ M K P++V Y +++ G C+ R DAC VL+ M G
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+ +YR L+ + G A M+++GF P S S L
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 163/317 (51%), Gaps = 2/317 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + T L + +++ + D A+K F M++ +P + I+ L N A
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMD-AVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM-AL 65
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L K + G PN +YN ++ + C + ++ A F++M + G+ PDV +Y ++ G
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C +VN A L + M+ + +P+ +++T L++ LC+K+ + EA+ + M KG PD+
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN +V G+C + +A K+ M GC PN+ SY L+ G C G D AK +
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M K +P L++GFC VG+ EA +L+E+ G P+ T+ +++ +C
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305
Query: 427 MEKLGEVLNEIVKVEIK 443
+++ E+L + + +I+
Sbjct: 306 LDEAFELLKAMQESKIE 322
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 162/345 (46%), Gaps = 38/345 (11%)
Query: 130 PSLFTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I + + AL+ + M E CKP N I++ L R + A D
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDR-LVTEAMD 101
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
F K G+ P+ +Y+ ++ FC G ++ A +LF +M ER V+P+ ++ IL+ GLC
Sbjct: 102 FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC 161
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC----- 302
+K ++ A + E M KG PD +Y L++ C + ++ EA KL M KGC
Sbjct: 162 KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221
Query: 303 ------------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
PDI Y+T++ GFC+ GR +A ++L++M
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S G LPNL++Y ++ GLC G D A + ++ M P+ + LI+G C GK+
Sbjct: 282 CSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKL 341
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ A + L G P T+ +++ + G + E+ E+
Sbjct: 342 EAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM 386
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 9/315 (2%)
Query: 112 SLIDDILITLKSEHYP------VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKP 163
SL D L+T + + + P +FTY ++ NL + A F+ M+E N P
Sbjct: 89 SLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIP 148
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+++ L R + A+ +F++ + G+ P+ +YN ++ +C + A L
Sbjct: 149 NKVTFTILIDGLCKKR-MISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
FN M +G P+V SY IL+ G C+ +++ A LL +M +K PD +Y+TL+ C+
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ 267
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ +EA +LL M G P+++ Y+ V+ G C+ G +A ++L+ M + PN+
Sbjct: 268 VGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFI 327
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ G+C G + A++ + KG P +I G G +EAC + E+
Sbjct: 328 YTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMA 387
Query: 404 KAGEAPHEDTWVMIV 418
G P+ T+ +I+
Sbjct: 388 VNGCLPNSCTYNVII 402
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 128/244 (52%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ P ++N ++ C I A LF++M + G PDV +Y ++ GLC+
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ LL+ M KG P+ ++Y T+++SLC+ + + EA M +G PD+ Y++++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC GR +A + + M +PN V++ L+ GLC + M A + M KG
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P +AL+ G+C+ ++DEA + + + G AP+ ++ +++ C +++ +
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242
Query: 434 LNEI 437
L E+
Sbjct: 243 LAEM 246
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 1/285 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + A F +M E +P N +++ + R+ + A LF
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS-RSQMDEAQKLFNIM 211
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G PN +SYNI++ C +G I A L +M + + PD+ +Y LM+G C+ +
Sbjct: 212 DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRP 271
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +LL++M + G +P+ ++Y+ +L+ LC+ L EA++LL M+ P+I Y +
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTIL 331
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G+ A ++ ++ G P +V+Y ++ GL G+ + A + + M G
Sbjct: 332 IEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGC 391
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
P+ + +I+GF G A ++EE++ G + T+ M+
Sbjct: 392 LPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
MF+ G+ P + ++ L+ GLC K+++ AV L ++M+ G PD ++Y+T++N LC+
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
A +LL +M+ KGC P++V YNT++ C++ +A +M G P++ +Y +
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ G C+ G + A + M+ + P+ LI G C + EA V E + + G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
P T+ +V C+ +M++ ++ N
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFN 209
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P LV++ TL+ GLC + A K M+ G P +I G C +G A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L+++ + G P+ + I+ +C + + + +E+VK I D
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPD 114
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 182/376 (48%), Gaps = 18/376 (4%)
Query: 65 VQKLIASQSDPLLAKEIFDYA---SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
+ +L+ ++ DP A +FD A S S T +L +L A L +L
Sbjct: 20 LHRLVRAERDPRRALALFDAATAASVSAPILPSPDTVSLLTSRLASAGLLPLATSLLSRS 79
Query: 122 KSEHYPVTPSL---FTYLIKIYAESNLPDRALKTFRSMLEFNCKP-LPKQLNRILELLVT 177
++ +P L F L++ ++ ++ P AL+ FRS P + +L LV+
Sbjct: 80 RA-LFPSAADLEPPFLTLLRAFSRTHRPLAALQLFRSAPSALALPHSARSYTAVLATLVS 138
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H ++L A L G P T +YN++++A C + I + ++F PD
Sbjct: 139 H-SHLPLAHSLLADMRAGGFAPTTATYNVLLKAHCSDASAPIEDAV--RLFRNIPKPDAC 195
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY ++ GLCR+S+ A ++ +M+ G P ++YTT++N L R L +A K+ M
Sbjct: 196 SYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEM 255
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P++V Y++++ G C+ GRA A ++L+ M LPN ++Y +++ GLC +
Sbjct: 256 GRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRL 315
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM- 416
+ A + + M +G P + LI G C G+ EA L+E++ +G P+ TW +
Sbjct: 316 NEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEMVLSGVEPNRVTWSLH 375
Query: 417 ------IVPQICAGEE 426
+V +CA E
Sbjct: 376 VRINDAVVTALCAKGE 391
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 194/376 (51%), Gaps = 15/376 (3%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A ++F A HS +Y ++ L + L +L +++ + T + +
Sbjct: 106 PLAALQLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPTTATYN 165
Query: 135 YLIKIY-AESNLP-DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
L+K + ++++ P + A++ FR++ KP N +++ L R+ A ++F
Sbjct: 166 VLLKAHCSDASAPIEDAVRLFRNI----PKPDACSYNTVIDGLC-RRSRRADAQEIFSEM 220
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+GV P +Y ++ +G + A +F++M G+ P+V +Y L+ GLC+ +
Sbjct: 221 VANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRA 280
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A++LL+ M + +P+T++Y++++N LC++ +L EA ++L RM+++G PD + +
Sbjct: 281 ASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKL 340
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR-------TLVGGLCDQGMFDVAKKYMQ 365
++G C GRA++A L++M +G PN V++ +V LC +G + Q
Sbjct: 341 IVGLCGAGRAVEAANYLDEMVLSGVEPNRVTWSLHVRINDAVVTALCAKGEAGRTFRVYQ 400
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M ++G S H L++ F +++A V+ ++L P +TW +I+ + + +
Sbjct: 401 SMRTRGISTEPGTFHLLVEFFSKKNDLEKAAHVVLDMLSEKCIPERETWDIILTRYWSKK 460
Query: 426 EMEKLGE-VLNEIVKV 440
++ + E + N++ V
Sbjct: 461 KVRQEAEQMWNQLTVV 476
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 9/265 (3%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNT-KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
THR A LF+SA LP++ +SY ++ + + +A++L M G P
Sbjct: 103 THRPL--AALQLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPT 160
Query: 236 VESYRILMQGLCRKSQ--VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+Y +L++ C + + AV L ++ PD SY T+++ LCR+ + +A ++
Sbjct: 161 TATYNVLLKAHCSDASAPIEDAVRLFRNIPK----PDACSYNTVIDGLCRRSRRADAQEI 216
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M G P +V Y TV+ R+G DA K+ ++M G PN+V+Y +L+ GLC
Sbjct: 217 FSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCK 276
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A + + M + P+ ++I G C +++EA VL+ + G P
Sbjct: 277 GGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGL 336
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIV 438
+ ++ +C + L+E+V
Sbjct: 337 FGKLIVGLCGAGRAVEAANYLDEMV 361
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 183 RPAFDLFKSAHKHGV----LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP---D 235
R A LF +A V LP+ + +++ G + +A +L ++ R + P D
Sbjct: 31 RRALALFDAATAASVSAPILPSPDTVSLLTSRLASAGLLPLATSLLSR--SRALFPSAAD 88
Query: 236 VES-YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL-SYTTLLNSLCRKKKLREAYKL 293
+E + L++ R + A+ L + +P + SYT +L +L L A+ L
Sbjct: 89 LEPPFLTLLRAFSRTHRPLAALQLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSL 148
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAI--DACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M+ G P YN ++ C + A DA ++ ++P P+ SY T++ GL
Sbjct: 149 LADMRAGGFAPTTATYNVLLKAHCSDASAPIEDAVRLFRNIPK----PDACSYNTVIDGL 204
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + A++ M++ G +P +I G +D+A + +E+ + G AP+
Sbjct: 205 CRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNV 264
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVK 439
T+ ++ +C G E+L+ + K
Sbjct: 265 VTYSSLIDGLCKGGRAASALELLDRMAK 292
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 186/403 (46%), Gaps = 37/403 (9%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++I SDPLL + F+++ + H+ +TY +L+ L + +
Sbjct: 75 NPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDC 134
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++S+ S+ L+ YA D A + + K P N +L +LV +N
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV-KQN 193
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A LF+ + +P+ S+NI++R C G+I A+ F M G PD+ SY
Sbjct: 194 LVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 253
Query: 241 ILMQGLCRKSQVNRAVDLL-EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC---- 295
L+ G CR +++++ DLL EDML KG PD ++YT++++ C+ ++ A +L
Sbjct: 254 TLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 313
Query: 296 -------------------------------RMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+M + GC PD+V + +++ G+CREG
Sbjct: 314 SGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQ 373
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
K+ E+M PN+ +Y L+ LC + A+ +++ + S P + + +I
Sbjct: 374 GLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVID 433
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
GFC GKVDEA ++ E+ + P + T+ +++ C M
Sbjct: 434 GFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 144/306 (47%), Gaps = 5/306 (1%)
Query: 112 SLIDDILITLKSEHYP-VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
+L+D+ ++ + P P ++++ LI+ D+A + F++M F C P
Sbjct: 193 NLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N ++ N + DL K GV P+ +Y ++ +C GD+ A LF++M
Sbjct: 253 NTLINGF-CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEM 311
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G+ P+ ++ +L+ G + + A+ + E ML G +PD +++T+L++ CR+ ++
Sbjct: 312 VSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEV 371
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+ KL MKV+ +P++ Y ++ C+E R +A L + S+ +P Y +
Sbjct: 372 NQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPV 431
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C G D A + M K P LI G C G++ EA ++++
Sbjct: 432 IDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINC 491
Query: 408 APHEDT 413
P E T
Sbjct: 492 VPDEIT 497
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +LF G+ PN ++N+++ F G++ A ++ KM G +PDV ++
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CR+ +VN+ + L E+M + P+ +Y L+N+LC++ ++REA L +K
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P YN V+ GFC+ G+ +A ++ +M C P+ +++ L+ G C +G A
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
MI P ++LI G +EA + + L+
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQ 523
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +LM+ LC+ + A + + M + G +PD+ L++S R KL A L +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G YN ++ ++ +A + + +P++ S+ L+ GLC G
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL-EELLKAGEAPHEDTWVM 416
D A ++ Q M + G P + LI GFC V ++ + +L E++L G +P T+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIK 443
I+ C +M+ E+ +E+V IK
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIK 317
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 15/363 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+A+EI +PN SNS + ++ ++ T K + P +F
Sbjct: 1 MAREIICDFWAKPNLDISNS-------------FTHFVERLIYTYKD--WGSDPHVFDVF 45
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
++ E+ L + A K F +L + N L L + R+ L +F + G
Sbjct: 46 FQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLG 105
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V NT+SYNI+M + G I A+ L +M +G +PDV SY ++ G C ++ + V
Sbjct: 106 VCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVV 165
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L+++M KG P+ +Y++++ LC+ K+ E K+L M +G PD V Y T++ GF
Sbjct: 166 QLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGF 225
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G A K+ +M + +P+ +++ L+ GL G A K MI KGF P
Sbjct: 226 CKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDE 285
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
ALI G+C +G++ +A + ++++ G P+ T+ + +C E++ E+L+E
Sbjct: 286 VTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHE 345
Query: 437 IVK 439
+ +
Sbjct: 346 MCR 348
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L+TY +I + +S K R M++ P +++ N + A+
Sbjct: 178 PNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN-TQAAYK 236
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF ++P++ +++ ++ +G + A LFN+M ++G PD +Y L+ G C
Sbjct: 237 LFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYC 296
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ +A L M+ G P+ ++YT L + LC+ +L A +LL M KG +I
Sbjct: 297 KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIS 356
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT+V G C+ G + A K++E+M G P+ ++Y TL+ G A++ ++ M
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G P + L+ G C GK+++ +L+ +L+ G P+ T+ I+ Q C M
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM 476
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L+ L K G+ PN +Y+ ++ C +G + + +M +RGV PD
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ G C+ A L +M + VPD+++++ L+ L K+ EA KL M
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
KG PD V Y ++ G+C+ G A + M G PN+V+Y L GLC G
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A + + M KG + S + ++ G C G + +A ++EE+ +AG P T+ +
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396
Query: 418 VPQICAGEEMEKLGEVLNEIV 438
+ EM K E+L E++
Sbjct: 397 MDAYYKTGEMVKARELLREML 417
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 135/255 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF K G P+ +Y ++ +C G++ A+ L N+M + G+ P+V +Y L
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +++ A +LL +M KG + +Y T++N LC+ + +A KL+ MK G +P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + Y T++ + + G + A ++L +M G P +V++ L+ GLC G + ++ +
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL 448
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG P+ + ++++K +C + + + + G P +T+ +++ C
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Query: 425 EEMEKLGEVLNEIVK 439
M++ + E+V+
Sbjct: 509 RNMKEAWFLHKEMVE 523
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 122/223 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ AF L + G+ PN +Y + C +G++ A L ++M +G+ ++ +Y
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC+ + +AV L+E+M G PDT++YTTL+++ + ++ +A +LL M +G
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P +V +N ++ G C G+ D ++L+ M G +PN +Y +++ C + ++
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+ + M ++G P + + LIKG C + EA + +E+++
Sbjct: 481 EIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 523
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC-RKSQVNRAVDLLEDM 262
+++ + G ++ A F+K+ GV S + + L ++ + + + +
Sbjct: 42 FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEF 101
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G +T SY L+NSL R K+REA+ LL RM+ KGC PD+V Y T++ G+C G
Sbjct: 102 PQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGEL 161
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+++++M G PNL +Y +++ LC G +K ++ M+ +G P + L
Sbjct: 162 QKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTL 221
Query: 383 IKGFCNV-----------------------------------GKVDEACGVLEELLKAGE 407
I GFC + GKV EA + E++K G
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGF 281
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
P E T+ ++ C EM+K + N++V++
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI 314
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 46/357 (12%)
Query: 88 QPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAE 142
+ F TY LI KLG K + + ++ + +TP++ TY L +
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI-----GLTPNVVTYTALADGLCK 332
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
S D A + M + N I+ L N L+ A L + + G+ P+T
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQ-AVKLMEEMKEAGLHPDTI 391
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y +M A+ G++ A L +M +RG+ P V ++ +LM GLC ++ LL+ M
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM 451
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L KG +P+ +Y +++ C + +R + ++ M +G PD YN ++ G C+
Sbjct: 452 LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A + ++ M+ K F+ S +AL
Sbjct: 512 KEAWFLHKE-----------------------------------MVEKRFNLTASSYNAL 536
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
IKGF K+ EA + EE+ + G + + + V ME E+ +E ++
Sbjct: 537 IKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIE 593
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 214 NGDISIAYTLFNKMF-----ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
N DIS ++T F + + G P V + + Q L +N A + +LN G
Sbjct: 14 NLDISNSFTHFVERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVA 71
Query: 269 PDTLSYTTLLNSLCRKKK-LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
S L L K+ L K+ G + YN ++ R G+ +A
Sbjct: 72 LSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHH 131
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L M GC+P++VSY T++ G C G + ++ M KG P+ ++I C
Sbjct: 132 LLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLC 191
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
GKV E VL E++K G P + ++ C + ++ +E+ EI D+
Sbjct: 192 KSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDS 250
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 35/365 (9%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALK 151
R + Y LI L A+ D+ + +K + T +T LIK S AL
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 152 TFRSMLEFNCKP-----------LPKQ---------LNRILEL-----LVTH-------- 178
+ M E KP L Q L ++LE ++T+
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 179 -RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R + A D+ + + PNT++YN +++ +C ++ A + NKM ER V+PDV
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVV 463
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ G CR + A LL M ++G VPD +YT++++SLC+ K++ EA L +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ KG NP++V Y ++ G+C+ G+ +A +LE M S CLPN +++ L+ GLC G
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + M+ G P S LI G D A +++L +G P T+
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 418 VPQIC 422
+ C
Sbjct: 644 IQTYC 648
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 159/311 (51%), Gaps = 2/311 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T+LI + D A+ F M + C P + +++ L A +L K
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK-SEALNLVKEM 349
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN +Y +++ + C A L +M E+G+MP+V +Y L+ G C++ +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
AVD++E M ++ P+T +Y L+ C K + +A +L +M + PD+V YN++
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR G A ++L M G +P+ +Y +++ LC + A + KG
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+P+ + ALI G+C GKVDEA +LE++L P+ T+ ++ +CA ++++
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 433 VLNEIVKVEIK 443
+ ++VK+ ++
Sbjct: 589 LEEKMVKIGLQ 599
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 189/405 (46%), Gaps = 13/405 (3%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P + S+ + S I SP V L + DP A + S+ P ++HS +Y L
Sbjct: 71 SKPNWHKSPSLKSMVSAI-SPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASL 129
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
+ L Y ++ I + + V +L Y++ + + N +R E
Sbjct: 130 LTLLINNGYVGVVFKIRLLMIKSCDSVGDAL--YVLDLCRKMNKDER--------FELKY 179
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
K + N +L L + ++ + V PN +YN M+ +C G++ A
Sbjct: 180 KLIIGCYNTLLNSLARF-GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+K+ E G+ PD +Y L+ G C++ ++ A + +M KG + ++YT L++ L
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C +++ EA L +MK C P + Y ++ C R +A ++++M G PN+
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+Y L+ LC Q F+ A++ + M+ KG P+ +ALI G+C G +++A V+E
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +P+ T+ ++ C + +G VLN++++ ++ D
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDV 462
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 159/333 (47%), Gaps = 10/333 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+PN TY +LI L F ++L + + + P++ TY LI Y + +
Sbjct: 355 KPNIH----TYTVLIDSLCSQCKFEKARELLGQMLEK--GLMPNVITYNALINGYCKRGM 408
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+ A+ M P + N +++ ++ + A + + VLP+ +YN
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYC--KSNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C +G+ AY L + M +RG++PD +Y ++ LC+ +V A DL + + K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ + YT L++ C+ K+ EA+ +L +M K C P+ + +N ++ G C +G+ +A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ E M G P + + L+ L G FD A Q M+S G P I+
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+C G++ +A ++ ++ + G +P T+ ++
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 19/334 (5%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E ++P+ TY LIK Y +SN+ +A+ MLE P N +++ N+
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A+ L + G++P+ +Y M+ + C + + A LF+ + ++GV P+V Y
Sbjct: 479 -DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V+ A +LE ML+K +P++L++ L++ LC KL+EA L +M G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P + ++ ++G A + M S+G P+ +Y T + C +G A+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV--- 418
M M G SP +LIKG+ ++G+ + A VL+ + G P + T++ ++
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 419 ------------PQICAGEEMEKLGEVLNEIVKV 440
P++CA M + V+ + K+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 26/296 (8%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
H+ +T++ + GR L+D + K V+P LFTY LIK Y + + A
Sbjct: 638 HTYTTFIQTYCREGR-----LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M + C+P +++ L+ K + G P + + MM
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLE-----------MKYGKQKGSEPELCAMSNMM-- 739
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVP 269
+ L KM E V P+ +SY L+ G+C + A + + M N+G P
Sbjct: 740 -----EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
L + LL+ C+ KK EA K++ M G P + ++ G ++G V
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+++ G + ++++ ++ G+ QG+ + + +M G LI+G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 23/332 (6%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP 165
G+ K +L+++ ++ + + T S T LI + D A F+ ML KP
Sbjct: 581 GKLKEATLLEEKMVKIGLQP---TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
++ L A D+ ++GV P+ +Y+ +++ + G + A+ +
Sbjct: 638 HTYTTFIQTYC-REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 226 KMFERGVMPDVESYRILMQGL---------------CRKS---QVNRAVDLLEDMLNKGF 267
+M + G P ++ L++ L C S + + V+LLE M+
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P+ SY L+ +C LR A K+ M + +G +P + +N ++ C+ + +A
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
KV++DM G LP L S + L+ GL +G + Q ++ G+ +I G
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G V+ + + K G T+ +++
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 196/407 (48%), Gaps = 26/407 (6%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLG-----RAKYFSL------ 113
V+ L + ++ P +A +F +A QP FR S + ++ L R+ Y+ +
Sbjct: 391 VRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINA 450
Query: 114 ----IDDILI--TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
I D+LI + SE V+ + LI +Y++ ++ ++ L F M++ P K
Sbjct: 451 NMHRIVDVLIGGCVSSE---VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKN 507
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
NRIL +L ++ + A +++++ + G+ P +YN ++ ++C G + L ++M
Sbjct: 508 CNRILRIL-RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 566
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
RG P+ +Y +L+ GL +K + +A L+ +ML G +Y L+ K L
Sbjct: 567 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLL 626
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA L M +KG +P + YN+ + G C+ GR DA + L DM +N LP++VSY TL
Sbjct: 627 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 686
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C G A + S P + L+ G C G+++ A + E++ G
Sbjct: 687 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 746
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD-----TRIV 449
AP T+ ++V C + E +E++ ++ D TRIV
Sbjct: 747 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 793
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 141 IRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 200
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+++++TTL++ C+ ++ A ++ +M +
Sbjct: 201 LINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 260
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C G D A
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAF 320
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + V ALI G C G +A +L E+L G P T+ MI+ +
Sbjct: 321 EHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEF 380
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 381 CKKGDVWKGSKLLKEM 396
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 57 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 115
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI IA ++F+ + + G+ P V SY LM G R
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 175
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 235
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M KG
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 295
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ + + ++ +C
Sbjct: 296 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAE 355
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V +K D R
Sbjct: 356 KMLREMLSVGLKPDAR 371
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 100 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPS 159
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C I A LF
Sbjct: 160 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF 218
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 219 DEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 278
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD + Y T++ G C++G A + + M + V Y
Sbjct: 279 GDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVY 338
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 339 TALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 398
Query: 405 AGEAP 409
G P
Sbjct: 399 DGHVP 403
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 154 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-ID 212
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN+ ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 213 DANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 272
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD ++YTTL++ C+ L A++ RM +
Sbjct: 273 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTR 332
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G CREG ++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 333 LDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 392
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 393 LKEMQRDGHVPSVVTYNVLMNG 414
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 113/235 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + ++ E G + + ILM C+ + A + + + G P +SY TL+
Sbjct: 108 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLM 167
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N R L E ++L M G PD+ Y+ ++ G C+E + DA ++ ++M G +
Sbjct: 168 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV 227
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 228 PNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 287
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++E+ G P + T+ ++ C +++ E +++ + D + A I
Sbjct: 288 IDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALI 342
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 186/403 (46%), Gaps = 37/403 (9%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++I SDPLL + F+++ + H+ +TY +L+ L + +
Sbjct: 75 NPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDC 134
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++S+ S+ L+ YA D A + + K P N +L +LV +N
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV-KQN 193
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A LF+ + +P+ S+NI++R C G+I A+ F M G PD+ SY
Sbjct: 194 LVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYN 253
Query: 241 ILMQGLCRKSQVNRAVDLL-EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC---- 295
L+ G CR +++++ DLL EDML KG PD ++YT++++ C+ ++ A +L
Sbjct: 254 TLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVS 313
Query: 296 -------------------------------RMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+M + GC PD+V + +++ G+CREG
Sbjct: 314 SGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQ 373
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
K+ E+M PN+ +Y L+ LC + A+ +++ + S P + + +I
Sbjct: 374 GLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVID 433
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
GFC GKVDEA ++ E+ + P + T+ +++ C M
Sbjct: 434 GFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 144/306 (47%), Gaps = 5/306 (1%)
Query: 112 SLIDDILITLKSEHYP-VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
+L+D+ ++ + P P ++++ LI+ D+A + F++M F C P
Sbjct: 193 NLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N ++ N + DL K GV P+ +Y ++ +C GD+ A LF++M
Sbjct: 253 NTLINGF-CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEM 311
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G+ P+ ++ +L+ G + + A+ + E ML G +PD +++T+L++ CR+ ++
Sbjct: 312 VSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEV 371
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+ KL MKV+ +P++ Y ++ C+E R +A L + S+ +P Y +
Sbjct: 372 NQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPV 431
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C G D A + M K P LI G C G++ EA ++++
Sbjct: 432 IDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINC 491
Query: 408 APHEDT 413
P E T
Sbjct: 492 VPDEIT 497
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +LF G+ PN ++N+++ F G++ A ++ KM G +PDV ++
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CR+ +VN+ + L E+M + P+ +Y L+N+LC++ ++REA L +K
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P YN V+ GFC+ G+ +A ++ +M C P+ +++ L+ G C +G A
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
MI P ++LI G +EA + + L+
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQ 523
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +LM+ LC+ + A + + M + G +PD+ L++S R KL A L +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G YN ++ ++ +A + + +P++ S+ L+ GLC G
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL-EELLKAGEAPHEDTWVM 416
D A ++ Q M + G P + LI GFC V ++ + +L E++L G +P T+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIK 443
I+ C +M+ E+ +E+V IK
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIK 317
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 5/332 (1%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H +S + + L A + +L L + P + F +I Y + L +RA
Sbjct: 430 HDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYA 489
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ M++F P + +L LV + L A+ G ++ +++ +
Sbjct: 490 YGIMVKFGLTPSSSTCSSLLISLV-RKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 548
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G +++A +L+N+M RGV PD ++ + GLC + A D+ DML KGFVP+
Sbjct: 549 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 608
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y +L+ C+ KL EA KL+ M +G PDI N ++ G C++GR A + DM
Sbjct: 609 VYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM 668
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDV--AKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
G P++V+Y TL+ G C FDV A M M G+ P + + I G+C V
Sbjct: 669 CRMGLSPDIVTYNTLIDGYCKA--FDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVR 726
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
K++ A +LEEL+ G P+ T+ ++ +C
Sbjct: 727 KINRAVMILEELISVGIVPNTVTYNTMINAVC 758
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 10/306 (3%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S+ST L++ L R L + + +PVT FT L+ Y + A +
Sbjct: 501 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 560
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P + L + A+D+F + G +PN YN ++ FC
Sbjct: 561 NEMKGRGVFPDAVAFAAFINGLCIS-GLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCK 619
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G ++ A L +M +RG++PD+ + +++ GLC++ ++ A++ DM G PD ++
Sbjct: 620 VGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVT 679
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL++ C+ + A L+ +M G PD+ YN + G+C + A +LE++
Sbjct: 680 YNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELI 739
Query: 334 SNGCLPNLVSYRTLVGGLC----DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
S G +PN V+Y T++ +C D M AK ++ F P+ + L+ FC
Sbjct: 740 SVGIVPNTVTYNTMINAVCNVILDHAMILTAK-----LLKMAFVPNTVTVNVLLSQFCKQ 794
Query: 390 GKVDEA 395
G ++A
Sbjct: 795 GMPEKA 800
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+K ++LE P N I+ + AF + K G+ P++ + +
Sbjct: 449 DEAMKLLENLLEKGIPPSVVAFNSIIAAY-GNAGLEERAFYAYGIMVKFGLTPSSSTCSS 507
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + G + A+ M ++G ++ +L+ G R VN A L +M +G
Sbjct: 508 LLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRG 567
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD +++ +N LC + +AY + M KG P+ YN+++ GFC+ G+ +A
Sbjct: 568 VFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEAL 627
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K++ +M G LP++ + ++ GLC QG +A + M G SP + LI G+
Sbjct: 628 KLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGY 687
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C V A ++ ++ +G P T+ + + C ++ + +L E++ V I +T
Sbjct: 688 CKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNT 747
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 75/424 (17%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAE--SNLPDRALK 151
+N T+ +LIL+ R K ++ I + L+ + + + P +++Y I I A AL
Sbjct: 256 NNFTFNLLILEFCR-KGWTRIGEALLHVMGK-FRCEPDVYSYNIVINANCLKGQSSYALH 313
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
M+E CKP I++ N + A F G+ NT YNIM+ +
Sbjct: 314 LLNLMIENGCKPSIATFCTIIDAFCKEGN-VELARKYFDEIEDMGLSQNTIVYNIMISGY 372
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQG-------------------------- 245
DIS A LF +M + ++PD ++ L+ G
Sbjct: 373 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 432
Query: 246 ---------LCRKSQVNRAVDLLEDMLNKGFVPDTLSY---------------------- 274
LC + + A+ LLE++L KG P +++
Sbjct: 433 SLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 492
Query: 275 -------------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
++LL SL RK L EA+ L M KG + + ++ G+ R G
Sbjct: 493 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A + +M G P+ V++ + GLC G+ A M+ KGF P+ V ++
Sbjct: 553 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 612
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI GFC VGK++EA ++ E+ K G P T MI+ +C M+ E ++ ++
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672
Query: 442 IKGD 445
+ D
Sbjct: 673 LSPD 676
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 163/381 (42%), Gaps = 26/381 (6%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKY-- 110
+S+ + S C + L+A++ LA++I + +R R N L + G Y
Sbjct: 129 DSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKN---LAAFMWEGHRVYES 185
Query: 111 -FSLIDDILIT-LKSE-HYPV--------------TPSLFTYLIKIYAESNLPDRALKTF 153
FS++D ++ +KSE H+ PS + L ++ + K F
Sbjct: 186 DFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 245
Query: 154 RSMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
++ P P +L L + + R L K P+ SYNI++ A C
Sbjct: 246 GDVVRKG--PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANC 303
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G S A L N M E G P + ++ ++ C++ V A +++ + G +T+
Sbjct: 304 LKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTI 363
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y +++ + + + +A L M+ K PD + +NT+V G R G+ D ++L D+
Sbjct: 364 VYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDL 423
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G L + V GLC G +D A K ++ ++ KG P +++I + N G
Sbjct: 424 SVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLE 483
Query: 393 DEACGVLEELLKAGEAPHEDT 413
+ A ++K G P T
Sbjct: 484 ERAFYAYGIMVKFGLTPSSST 504
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + +KM E GV P+ + IL + L R L D++ KG P+ ++ L+
Sbjct: 206 ALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLIL 265
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CRK R LL M C PD+ YN V+ C +G++ A +L M NGC P
Sbjct: 266 EFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKP 325
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++ ++ T++ C +G ++A+KY + G S + V + +I G+ + +A +
Sbjct: 326 SIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLF 385
Query: 400 EELLKAGEAPHEDTWVMIVP 419
EE+ P T+ +V
Sbjct: 386 EEMRTKDIVPDGITFNTLVA 405
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D LMQ + A+++L M G P+ + + L L R +KL
Sbjct: 186 DFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 245
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+ KG P+ +N ++L FCR+G +L M C P++ SY ++ C +
Sbjct: 246 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLK 305
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + LMI G P + +I FC G V+ A +E+ G + + +
Sbjct: 306 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 365
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++ ++ + + E+ +I D
Sbjct: 366 NIMISGYVKARDISQANLLFEEMRTKDIVPD 396
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 22/407 (5%)
Query: 41 PSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLI 100
PSS ES ++++ + + + L A + F Y + F+H+ TY +
Sbjct: 32 PSSASLLHESHVAHA-------------LRREPNVLYALQHFQYLTNTLAFKHTPLTYHV 78
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
+I KLGR + IL +K E P + F ++ Y S L DRALK F + EF
Sbjct: 79 MIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFG 138
Query: 161 CKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
CKP K N +L+ LL N ++++ G+ PN +YN++++A C NG +
Sbjct: 139 CKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDG 198
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L +M +RG +PD SY ++ +C +V A ++ +G V L+
Sbjct: 199 ACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVC---NALIC 255
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LCR+ ++ E + L+ M G +P++V Y++V+ G A VL M GC P
Sbjct: 256 GLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRP 315
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA---C 396
N+ ++ +L+ G G ++M+ +G P+ V + L+ G C G + EA C
Sbjct: 316 NVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVC 375
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G +E+ P+ T+ +V +++ EV N++V ++
Sbjct: 376 GRMEK--DCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVR 420
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 1/254 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L +GV PN SY+ ++ G++ +A + KM RG P+V ++ LM+
Sbjct: 266 VFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMK 325
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCN 303
G +V V L M+ +G P+ + Y TLLN LC L EA + RM K C
Sbjct: 326 GYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCR 385
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ Y+T+V GF + G A +V M + G PN+V Y ++V LC MFD A +
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRL 445
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M + G P + IKG C G+V A V++++ + G P T+ ++ + +
Sbjct: 446 IDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFS 505
Query: 424 GEEMEKLGEVLNEI 437
E+++ E++ E+
Sbjct: 506 VNELKEACELIREL 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 160/389 (41%), Gaps = 89/389 (22%)
Query: 108 AKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLP 165
+ F L+D+++ V P++ +Y +I ++ + AL M+ C+P
Sbjct: 264 GEVFGLMDEMVGN------GVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNV 317
Query: 166 KQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
+ +++ + R + L++ GV PN YN ++ C +G+++ A +
Sbjct: 318 HTFSSLMKGYFLGGR--VGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVC 375
Query: 225 NKM----FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+M F R P+V +Y L+ G + + A ++ M+N G P+ + YT++++
Sbjct: 376 GRMEKDCFCR---PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDV 432
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP- 339
LC+ +AY+L+ M GC P +V +NT + G C GR + A +V++ M GCLP
Sbjct: 433 LCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPD 492
Query: 340 ----------------------------------NLVSYRTLVGGLCDQGMFDVAKKYMQ 365
NLV+Y T++ G G + + +
Sbjct: 493 TRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLG 552
Query: 366 LMISKGFSPH----------FS-------------------------VSH-ALIKGFCNV 389
M+ G P +S ++H +L+ G CN
Sbjct: 553 RMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNS 612
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++EA L ++L G P+ TW ++V
Sbjct: 613 LGIEEAIVYLNKMLNKGIFPNIATWDVLV 641
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY L+ + ++ A + + M+ +P ++++L + + A+
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMF-DQAYR 444
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P ++N ++ C G + A + ++M G +PD +Y L+ GL
Sbjct: 445 LIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLF 504
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+++ A +L+ ++ + + ++Y T++ K ++L RM V G PD +
Sbjct: 505 SVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAI 564
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N V+ + + G+ A + L+ + + L P+++++ +L+ G+C+ + A Y+
Sbjct: 565 TVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNK 624
Query: 367 MISKGFSPHFSVSHALIKGF 386
M++KG P+ + L++GF
Sbjct: 625 MLNKGIFPNIATWDVLVRGF 644
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+ LID+ + ++ P T F IK A++ M + C P + N
Sbjct: 443 YRLIDN----MATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L+ L + N L+ A +L + + V N +YN +M F +G + +M
Sbjct: 499 LLDGLFS-VNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVN 557
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLRE 289
GV PD + +++ + +V A+ L+ + K PD +++T+LL +C + E
Sbjct: 558 GVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEE 617
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
A L +M KG P+I ++ +V GF ++ + ++L+D+ G
Sbjct: 618 AIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 184/379 (48%), Gaps = 3/379 (0%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P +V ++ SQ D +A + F +A RQ +RH Y ++ L + K +L+ +
Sbjct: 177 PSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLM 236
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
K TP F ++ Y+ + ALK M +P N +++ V N
Sbjct: 237 KRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV-RANR 295
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G++PN +YN M+R +C + A L + M +G +PD SY
Sbjct: 296 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYT 355
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+M LC++ ++ DL++ M + G V D ++Y TL++ L + EA L + K
Sbjct: 356 IMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEK 415
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFDV 359
G D V Y+ +V C+EGR +A ++ +M S G C P++V+Y +V G C G D
Sbjct: 416 GFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 475
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AKK +Q+M + G+ P+ AL+ G C GK EA ++ + +P+ T+ +++
Sbjct: 476 AKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMH 535
Query: 420 QICAGEEMEKLGEVLNEIV 438
+ ++ + +V+ E+V
Sbjct: 536 GLRKEGKLSEACDVVREMV 554
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 2/267 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + H HG PNT SY ++ C G A + N E+ P+ +Y +LM
Sbjct: 476 AKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMH 535
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL ++ +++ A D++ +M+ KGF P + LL SLCR + EA K + KGC
Sbjct: 536 GLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 595
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V++ TV+ GFC+ A VL+DM ++ +Y TLV L +G A + M
Sbjct: 596 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELM 655
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG P +I +C + KVD+ +LE+++ + + + ++ ++C
Sbjct: 656 KKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKC--KTIYNQVIEKLCGL 713
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEA 451
++E+ ++L ++++ + D + A
Sbjct: 714 GKLEEADKLLGKVLRTASRSDAKTCYA 740
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 2/235 (0%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ +L H ++ A K A + G + Y+ ++ A C G +S A L N+M
Sbjct: 390 NTLIHMLTKH-DHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448
Query: 229 ERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+G PDV +Y ++ G CR +V++A LL+ M G+ P+T+SYT LLN LCR K
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA +++ + + +P+ + Y+ ++ G +EG+ +AC V+ +M G P V L
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLL 568
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ LC G A+K+M+ ++KG + + +I GFC ++D A VL+++
Sbjct: 569 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 623
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 175/385 (45%), Gaps = 13/385 (3%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
D L + A +PN N+T + + K ++ + + + P++
Sbjct: 263 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV------GIVPNVV 316
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY +I+ Y + + + A++ M C P I+ L + + + K
Sbjct: 317 TYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 376
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A +HG++ + +YN ++ + A E+G D Y ++ LC++ +
Sbjct: 377 AKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGR 436
Query: 252 VNRAVDLLEDMLNKGFVP-DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ A DL+ +ML+KG P D ++YT ++N CR ++ +A KLL M G P+ V Y
Sbjct: 437 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYT 496
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G CR G++++A +++ PN ++Y L+ GL +G A ++ M+ K
Sbjct: 497 ALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLK 556
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
GF P + L++ C G+ EA +EE L G A + + ++ C +E++
Sbjct: 557 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 616
Query: 431 GEVLNEIVKVEIKGD----TRIVEA 451
VL+++ + D T +V+A
Sbjct: 617 LSVLDDMYLINKHADVFTYTTLVDA 641
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A D+ + G P N+++++ C +G A + +G +V ++
Sbjct: 543 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 602
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C+ +++ A+ +L+DM D +YTTL+++L +K ++ EA +L+ +M KG
Sbjct: 603 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKG 662
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+P V Y TV+ +C+ + D +LE M + Y ++ LC G + A
Sbjct: 663 IDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTI--YNQVIEKLCGLGKLEEAD 720
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVG 390
K + ++ +AL++G+ +G
Sbjct: 721 KLLGKVLRTASRSDAKTCYALMEGYLKIG 749
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 87/170 (51%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + Y ++L L + K + A ++L MK +G + V++ + R G+ DA KVL
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M G PNL+ T + + A ++++ M G P+ + +I+G+C++
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+V+EA +L+++ G P + ++ I+ +C + + ++ +++ ++ K
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 378
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 123 SEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
SE +P+ TY + ++ E L + A R M+ P P ++N +L+ L
Sbjct: 518 SEEQWWSPNSITYSVLMHGLRKEGKLSE-ACDVVREMVLKGFFPGPVEINLLLQSLCRD- 575
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
A + G N ++ ++ FC N ++ A ++ + M+ DV +Y
Sbjct: 576 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 635
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC----------------- 282
L+ L +K ++ A +L++ ML+KG P ++Y T+++ C
Sbjct: 636 TTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMIL 695
Query: 283 RKK----------------KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
R+K KL EA KLL ++ D ++ G+ + G + A
Sbjct: 696 RQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAY 755
Query: 327 KVLEDMPSNGCLPNL-----VSYRTLVGG 350
KV M + +P++ +S R +V G
Sbjct: 756 KVACRMFNRNLIPDVKMCEKLSKRLVVEG 784
>gi|224075802|ref|XP_002304774.1| predicted protein [Populus trichocarpa]
gi|222842206|gb|EEE79753.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 182/352 (51%), Gaps = 1/352 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V +++ +++P LA + F +A +Q F+H+ ++Y L R+ +F D +
Sbjct: 126 TPDLVAEVLKVENNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPEL 185
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++++ P T F LI++++++N R ++ M++F KP NRI++ L+
Sbjct: 186 MEAQGKPPTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIK-TG 244
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A +++ + G++ + +Y I+++ C G I + +M E PDV +Y
Sbjct: 245 HLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYT 304
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+++ L + ++ + + E+M G PD ++Y TL+ +LC+ ++ + Y++ MK +
Sbjct: 305 AMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGR 364
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
D Y +V F +G+ AC +L+D+ +G +L Y +L+ G C+ D A
Sbjct: 365 RILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFCNVKRVDKA 424
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
K Q+ + +G F + L+ + + K+D+ C +L+++ K G + +D
Sbjct: 425 HKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDFCKLLKQMEKLGFSVFDD 476
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 25/333 (7%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFR----------SMLEFNCKPLPKQLNRILELLVT 177
VTP L ++K+ N P A K F + +N LNR
Sbjct: 125 VTPDLVAEVLKV---ENNPQLATKFFHWAGKQKGFKHTFASYNA--FAYNLNR------- 172
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
N+ R A L + G P K + I++R Y ++ KM + GV P V
Sbjct: 173 -SNFFRAADQLPELMEAQGKPPTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVF 231
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y +M L + ++ A+ + ED G V ++++Y L+ LC+ ++ E ++L RM
Sbjct: 232 LYNRIMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRM 291
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDAC-KVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ C PD+ Y +V EG +DAC +V E+M +G P++++Y TLV LC G
Sbjct: 292 RENLCKPDVFAYTAMVRALAGEGN-LDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGR 350
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D + + M + + L++ F GK+ AC +L++L+ +G +
Sbjct: 351 VDKGYEVFKEMKGRRILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNS 410
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
++ C + ++K ++ V+ ++ D + V
Sbjct: 411 LIEGFCNVKRVDKAHKLFQVTVQEGLERDFKTV 443
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YNI+M A G++ A +LF +M + PD +Y I + + A ++
Sbjct: 512 YNILMEALLTIGEMKRALSLFGEMKDLN-KPDSTTYSIAIICFVEDGNIQEACVSHNKIV 570
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLL--CRMKVKGCNPDIVHYNTVVLGFCREGR 321
VP +Y +L LC ++ A L+ C V+ P Y+ +L C+ G
Sbjct: 571 EMFCVPSVAAYCSLAKGLCDNGEIDAAMMLVRDCLASVES-GPMEFKYSLTILHACKTGG 629
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
A VL +M GC PN V Y ++ G+C G F+ A+K
Sbjct: 630 AEKVIDVLNEMMQEGCTPNEVIYSAIISGMCKHGTFEEARK 670
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P++ +Y+I + F +G+I A NK+ E +P V +Y L +GLC +++ A+ L
Sbjct: 541 PDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEIDAAMML 600
Query: 259 LEDML---NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ D L G P Y+ + C+ + +L M +GC P+ V Y+ ++ G
Sbjct: 601 VRDCLASVESG--PMEFKYSLTILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSAIISG 658
Query: 316 FCREGRAIDACKVLEDM 332
C+ G +A KV D+
Sbjct: 659 MCKHGTFEEARKVFTDL 675
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 103/288 (35%), Gaps = 71/288 (24%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A DL K G + + YN ++ FC + A+ LF + G+ D ++ L+
Sbjct: 389 ACDLLKDLVDSGYRADLRIYNSLIEGFCNVKRVDKAHKLFQVTVQEGLERDFKTVNPLLM 448
Query: 245 GLCRKSQVNRAVDLLEDMLNKGF-VPDTLS------------------------------ 273
+++ LL+ M GF V D LS
Sbjct: 449 SYAEMKKMDDFCKLLKQMEKLGFSVFDDLSKFFSYVVGKPERTMMALEVFEDLKVKGYSS 508
Query: 274 ---YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
Y L+ +L +++ A L MK PD Y+ ++ F +G +AC
Sbjct: 509 VPIYNILMEALLTIGEMKRALSLFGEMKDLN-KPDSTTYSIAIICFVEDGNIQEACVSHN 567
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK-----------------KY---------- 363
+ C+P++ +Y +L GLCD G D A KY
Sbjct: 568 KIVEMFCVPSVAAYCSLAKGLCDNGEIDAAMMLVRDCLASVESGPMEFKYSLTILHACKT 627
Query: 364 ---------MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ M+ +G +P+ + A+I G C G +EA V +L
Sbjct: 628 GGAEKVIDVLNEMMQEGCTPNEVIYSAIISGMCKHGTFEEARKVFTDL 675
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES------YRILMQGLCRKSQ 251
+P+ +Y + + C NG+I A M R + VES Y + + C+
Sbjct: 575 VPSVAAYCSLAKGLCDNGEIDAAM-----MLVRDCLASVESGPMEFKYSLTILHACKTGG 629
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +D+L +M+ +G P+ + Y+ +++ +C+ EA K+ ++
Sbjct: 630 AEKVIDVLNEMMQEGCTPNEVIYSAIISGMCKHGTFEEARKVFTDLR 676
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 187/412 (45%), Gaps = 37/412 (8%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V ++ SQ D +A + F +A RQ +RH Y ++ L + + IL
Sbjct: 163 NPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRL 222
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ +P F+Y++ Y+ + + AL+ M + +P N + +LV N
Sbjct: 223 MTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKG-N 281
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A + G+ P+ SYN +++ +C I A L +M +G PD SY
Sbjct: 282 KLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYY 341
Query: 241 ILMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLL--------------------- 278
+M LC+ +V L+E+M+ N +PD ++Y TL+
Sbjct: 342 TVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEE 401
Query: 279 --------------NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+S C+ K + +A L+ M KGCNPD+V Y ++ GFCR G+ +
Sbjct: 402 KGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDE 461
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+L+ M +GC PN V+Y L+ GLC G A++ + + ++P+ A++
Sbjct: 462 AKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMH 521
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
G GK+ EAC + E+++ G P+ +++ +C + + + L E
Sbjct: 522 GLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEE 573
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 179/385 (46%), Gaps = 11/385 (2%)
Query: 79 KEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH---YPVTPSLFTY 135
K + + + N TY LI L + + DD L+ L+ + + ++
Sbjct: 357 KRLMENMVQNSNLIPDQVTYNTLIYALSKHGH---ADDALVFLREAEEKGFHIDKVGYSA 413
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ + ++ D+A M C P I++ + A + + +KH
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC-RVGKIDEAKKMLQQMYKH 472
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PNT +Y +++ C NG A + N E P+ +Y +M GL R+ +++ A
Sbjct: 473 GCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DL +M+ KGF+P+ + L+ SLCR + + A K L KGC ++V++ +V+ G
Sbjct: 533 CDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYG 592
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G A +LEDM + P+ ++Y TL L + D A + + M+ KG P
Sbjct: 593 FCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPT 652
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
A+I FC G+VD+ +LE+++ P + + ++ ++C E+ ++L
Sbjct: 653 PVTYRAVIHRFCQWGRVDDMMKLLEKMI--ARQPFKTVYNQVIEKLCYFGNREEAEKLLG 710
Query: 436 EIVKVEIKGDTRIVEAGIGLEDYLI 460
++++ K D + I +E YLI
Sbjct: 711 KVLRTASKLDAKTCH--ILIESYLI 733
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 11/280 (3%)
Query: 157 LEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSA-----HKHGVLPNTKSYNIMMRA 210
E N + L + LN R++ ++ ++ R A D F A ++H + +I+ +
Sbjct: 151 FEENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKT 210
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G A + M RG+ E++ +M R + A+ +L M G PD
Sbjct: 211 RLCQG----ARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPD 266
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
T + L + KL +A + L RMKV G PDIV YN ++ G+C R DA +++
Sbjct: 267 LSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIA 326
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI-SKGFSPHFSVSHALIKGFCNV 389
+MP GC P+ VSY T++ LC + K+ M+ M+ + P + LI
Sbjct: 327 EMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKH 386
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G D+A L E + G + + +V C + ++K
Sbjct: 387 GHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDK 426
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 43/292 (14%)
Query: 118 LITLKSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+I + EH+ TP+ TY ++ E L + A R M+E P P +N +++
Sbjct: 500 MINVSEEHW-WTPNAITYSAVMHGLRREGKLSE-ACDLTREMIEKGFLPNPVDINLLIQS 557
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L ++N + L + HK G N ++ ++ FC GD+ A ++ M+ P
Sbjct: 558 LCRNQNVVGAKKYLEECLHK-GCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHP 616
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D +Y L L +KS+++ A +L+ ML KG P ++Y +++ C+ ++ + KLL
Sbjct: 617 DAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLL 676
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCR-----------------------------------E 319
+M + P YN V+ C +
Sbjct: 677 EKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLID 734
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
G A+ A KV M +P+L + L GM A M + +G
Sbjct: 735 GNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERG 786
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 85/170 (50%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + Y T+L+ L + + + A ++L M +G ++ V++ + R G +A ++L
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M G P+L T + L + A ++++ M G P + LIKG+C+V
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++D+A ++ E+ G P + ++ ++ +C ++E++ ++ +V+
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ 365
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 181/391 (46%), Gaps = 38/391 (9%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R +F TY I+I L L +L L S++ T +T LI+
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D ALK ML KP N I+ + R AF++ ++ G P+ SYNI
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR-AFEMVRNLELKGSEPDVISYNI 303
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++RA G L KMF P+V +Y IL+ LCR ++ A++LL+ M KG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA---- 322
PD SY L+ + CR+ +L A + L M GC PDIV+YNTV+ C+ G+A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 323 -------------------------------IDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
I A ++ +M SNG P+ ++Y +++ L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C +GM D A + + M S F P + ++ GFC ++++A VLE ++ G P+E
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 412 DTWVMIVPQIC-AGEEMEKLGEVLNEIVKVE 441
T+ +++ I AG E + E+ N++V+++
Sbjct: 544 TTYTVLIEGIGFAGYRAEAM-ELANDLVRID 573
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 4/308 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F Y LI + + N D A + M + P N ++ L + R L A
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-RGKLDLALK 214
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ P +Y I++ A G + A L ++M RG+ PD+ +Y +++G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V+RA +++ ++ KG PD +SY LL +L + K E KL+ +M + C+P++V
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ CR+G+ +A +L+ M G P+ SY L+ C +G DVA ++++ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEE 426
IS G P + ++ C GK D+A + +L + G +P+ ++ M +G++
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 427 MEKLGEVL 434
+ L +L
Sbjct: 455 IRALHMIL 462
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 123/240 (51%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN ++ FC I A + ++M + PD +Y I++ LC + +++ A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +L+ P ++YT L+ + + + EA KL+ M +G PD+ YNT++ G C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EG A +++ ++ G P+++SY L+ L +QG ++ +K M M S+ P+
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI C GK++EA +L+ + + G P ++ ++ C ++ E L ++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 122/221 (55%), Gaps = 3/221 (1%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ E+ PDV +Y L+ G C+ ++++ A +L+ M +K F PDT++Y ++ SLC +
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
KL A K+L ++ C P ++ Y ++ EG +A K++++M S G P++ +Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
T++ G+C +GM D A + ++ + KG P + L++ N GK +E ++ ++
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ T+ +++ +C ++E E +N + ++ KG T
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIE---EAMNLLKLMKEKGLT 365
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 173/364 (47%), Gaps = 1/364 (0%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
+I Y P F T L + + + A S++ I ++ + S F++ ++
Sbjct: 32 KIVHYGLSIPPFHLQQKTPLPIPIFIIFALIISVVSICCINQQTLFPCFSLSGFSFYVQT 91
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
+ + +A+K M KP N ++ + L A + +G P
Sbjct: 92 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING-ICKEGRLDEAIKFLNNMPSYGCQP 150
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N ++NI++R+ C G A L + M +G P V ++ IL+ LCR+ + RA+D+L
Sbjct: 151 NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL 210
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E M G P++LSY LL+ C++KK+ A + L M +GC PDIV YNT++ C++
Sbjct: 211 EKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKD 270
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ A ++L + S GC P L++Y T++ GL G + A K + M KG P
Sbjct: 271 GKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 330
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+L+ G GKVDEA +L G P+ T+ I+ +C + ++ + L ++
Sbjct: 331 SSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 390
Query: 440 VEIK 443
K
Sbjct: 391 KRCK 394
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 161/310 (51%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D A+K +M + C+P N IL + + ++ A
Sbjct: 115 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM-DAEK 173
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ ++NI++ C G + A + KM G P+ SY L+ G C
Sbjct: 174 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 233
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++RA++ L+ M+++G PD ++Y TLL +LC+ K+ A ++L ++ KGC+P ++
Sbjct: 234 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 293
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+ A K+L++M G P++++Y +LV GL +G D A K+ +
Sbjct: 294 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ ++++ G C + D A L ++ P E T+ +++ I
Sbjct: 354 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 413
Query: 428 EKLGEVLNEI 437
++ ++LNE+
Sbjct: 414 KEALDLLNEL 423
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A K ML C P N ++ L + L A D+ + HG PN+ SYN ++
Sbjct: 171 AEKLLSDMLRKGCSPSVVTFNILINFLC-RQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 229
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC + A + M RG PD+ +Y L+ LC+ +V+ AV++L + +KG
Sbjct: 230 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 289
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P ++Y T+++ L + K A KLL M+ KG PDI+ Y+++V G REG+ +A K
Sbjct: 290 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 349
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
D+ G PN ++Y +++ GLC D A ++ MISK P + LI+G
Sbjct: 350 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 409
Query: 389 VGKVDEACGVLEELLKAG 406
G EA +L EL G
Sbjct: 410 EGLAKEALDLLNELCSRG 427
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 133/243 (54%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
++ ++ C + A L ++M +G PDV +Y +L+ G+C++ +++ A+ L +M
Sbjct: 84 GFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 143
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ G P+ +++ +L S+C + +A KLL M KGC+P +V +N ++ CR+G
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +LE MP +GC PN +SY L+ G C + D A +Y+ +M+S+G P + L
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ C GKVD A +L +L G +P T+ ++ + + E+ ++L+E+ + +
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 323
Query: 443 KGD 445
K D
Sbjct: 324 KPD 326
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ L + + +IL L S+ +P L TY +I ++ +RA+K
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKG--CSPVLITYNTVIDGLSKVGKTERAIKLLD 316
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M KP + ++ L + + A F G+ PN +YN +M C +
Sbjct: 317 EMRRKGLKPDIITYSSLVSGL-SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A M + P +Y IL++G+ + A+DLL ++ ++G V
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 183/364 (50%), Gaps = 5/364 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F+ S P++ H S+Y I R + + ++ ++S TP F +
Sbjct: 84 ALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIA 143
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ YA + P RA+K F SM +F C + N IL++L + + A++LFK K
Sbjct: 144 ERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKR-VEMAYNLFK-VFKGKF 201
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ SYN+M+ +C + A + +M +RG+ P++ SY +++G R Q+N A D
Sbjct: 202 RADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWD 261
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+M + D ++YTT+++ +++ A K+ M KG P + YN + C
Sbjct: 262 FFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLC 321
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
++ +A + E+M G +PN ++Y ++ GLC +G + A ++M M G P+
Sbjct: 322 KKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQ 381
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL---GEVL 434
+ +I+ FC+ G++D+A + +++ P+ DT+ +++ + ++ + L G +L
Sbjct: 382 TYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLL 441
Query: 435 NEIV 438
E+V
Sbjct: 442 IEMV 445
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V PS+ TY I++ + + D A+ F M+ P N ++ L HR + A
Sbjct: 306 VLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLC-HRGEMERA 364
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G PN ++YN+++R FC G+I A LF KM +P++++Y IL+
Sbjct: 365 MEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISA 424
Query: 246 LCRKSQVNR---AVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + + + A +LL +M+++GFVP ++ +LN L
Sbjct: 425 MFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGL 463
>gi|356510096|ref|XP_003523776.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Glycine max]
Length = 640
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 143/258 (55%), Gaps = 1/258 (0%)
Query: 182 LRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ AF+LF+ + ++P+ +YN+++ FC G A + M P+V +Y
Sbjct: 379 VKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDRARNVIEFMKSNRCYPNVYNYS 438
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GLC+ ++ A +L +M G PDT++YT+L+N LCR ++ EA LL +K
Sbjct: 439 ALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLCRNGQIGEAMGLLKEIKEN 498
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C D V +N ++ G CRE R +A +LE +P G N SYR ++ L + A
Sbjct: 499 TCQADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYLNKGSYRIVLNSLTQKCELKKA 558
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K+ + LM+S+GF PH++ S+ L+ C G VD+A L L++ G P ++W +++
Sbjct: 559 KELLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAAVALFYLVEMGFQPGLESWEVLIGL 618
Query: 421 ICAGEEMEKLGEVLNEIV 438
IC ++ + E+LNE+V
Sbjct: 619 ICRERKLLYVFELLNELV 636
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 1/202 (0%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYK 292
P++ +Y M GLCR +V A +L E+M+++ VPD L+Y L+N CR+ K A
Sbjct: 361 PNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDRARN 420
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
++ MK C P++ +Y+ +V G C+ G+ DA VL +M +G P+ V+Y +L+ LC
Sbjct: 421 VIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLC 480
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A ++ + + ++ G C + +EA +LE+L + G ++
Sbjct: 481 RNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYLNKG 540
Query: 413 TWVMIVPQICAGEEMEKLGEVL 434
++ +++ + E++K E+L
Sbjct: 541 SYRIVLNSLTQKCELKKAKELL 562
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 5/260 (1%)
Query: 96 STYLILILKLGRAK-YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
ST++ + + GR K F L ++++ +H P + LI + PDRA
Sbjct: 367 STFMDGLCRNGRVKEAFELFEEMV---SRDHIVPDPLTYNVLINEFCRRGKPDRARNVIE 423
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M C P + +++ L L A + G+ P+T +Y ++ C N
Sbjct: 424 FMKSNRCYPNVYNYSALVDGLCK-VGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLCRN 482
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G I A L ++ E D ++ +++ GLCR+ + A+D+LE + +G + SY
Sbjct: 483 GQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALDMLEKLPQQGVYLNKGSY 542
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+LNSL +K +L++A +LL M +G P N +++ C+ G DA L +
Sbjct: 543 RIVLNSLTQKCELKKAKELLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAAVALFYLVE 602
Query: 335 NGCLPNLVSYRTLVGGLCDQ 354
G P L S+ L+G +C +
Sbjct: 603 MGFQPGLESWEVLIGLICRE 622
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++ Y+T + G CR GR +A ++ E+M S + +P+ ++Y L+ C +G D A+
Sbjct: 361 PNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINEFCRRGKPDRARN 420
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M S P+ AL+ G C VGK+++A GVL E+ +G P T+ ++ +C
Sbjct: 421 VIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPDTVTYTSLINFLC 480
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLED 457
++ + +L EI + + DT ++ G+ ED
Sbjct: 481 RNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCRED 518
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 169/421 (40%), Gaps = 52/421 (12%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRH-SNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
LI + D +IF+ S Q F+H SN+TY ++ KL F + +L + E
Sbjct: 59 LIKCEKDSQHTLKIFNMVSEQNGFQHGSNATYATILEKLACCYKFHAVHCVLHQMAYETC 118
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPA 185
+F L+K +++S++ ++ L F S+ KP LN L+ N + A
Sbjct: 119 KFHEGIFVNLMKHFSKSSIHEKVLHAFFSIQPIVREKPXSTCLN-----LLQDSNRVDLA 173
Query: 186 FDLFKSAHKHGVL--PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
L A K G+ PNT +NI+++ C NGD+ A+ + +M R +
Sbjct: 174 RKLLLHA-KRGLTHKPNTCVFNILVKYHCKNGDLDSAFEVVKEM--RNSKLSLLELVAFS 230
Query: 244 QGLCRKSQVNRAV-------DLLEDMLNKGFVPDTLSYTTL---------LNS-LCRKKK 286
C SQ+ ++ +LE ++K VP T L LN+ L
Sbjct: 231 AVFCHLSQLRYSLSHSVQLTQILEIQVSKSVVPQPFLSTCLSLQAIVFHDLNTNLKSSIP 290
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTV-VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
++ ++ + V + ++H+++V V + +C + S CL + ++
Sbjct: 291 VQWSFDDQPSVLVIDLHFFVLHHHSVEVYLYLWSNLLCLSCSGISLFLS--CLCDYQNHH 348
Query: 346 TLVGGL-------------------CDQGMFDVAKKYMQLMISKG-FSPHFSVSHALIKG 385
L G+ C G A + + M+S+ P + LI
Sbjct: 349 FLTDGVLAGLSYPNLFTYSTFMDGLCRNGRVKEAFELFEEMVSRDHIVPDPLTYNVLINE 408
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
FC GK D A V+E + P+ + +V +C ++E VL E+ +K D
Sbjct: 409 FCRRGKPDRARNVIEFMKSNRCYPNVYNYSALVDGLCKVGKLEDAKGVLAEMKGSGLKPD 468
Query: 446 T 446
T
Sbjct: 469 T 469
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PD +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+K ++ A ++ RM +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K +L E+
Sbjct: 398 CKKGDVWKGSRLLKEM 413
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+K +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 NGHVP 420
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C G + +A ++ +M + ++PD+ +Y L+
Sbjct: 230 DANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M+ KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRNGHVPSVVTYNVLMNG 431
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 151/280 (53%), Gaps = 3/280 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P +FTY LI Y + P K + M+++ C+P N +++ LV Y+ AF
Sbjct: 169 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI-DAF 227
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L + + P+ ++N+M+ FC G + +AY LF M +RG +PD+ +Y I++ G
Sbjct: 228 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 287
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR ++++ A LLE M G PD ++Y ++++ LC+ ++ EAY++ ++ G D+
Sbjct: 288 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 347
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V +T++ G C+ R DA K+L +M NG P++V+Y L+ G C D + +
Sbjct: 348 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M+ KG P +I C +V + C +L+ +L+ G
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 37/333 (11%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + A F++ L C P + ++ R++ + A+ L K
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDF-QQAYRLLDEMEKR 62
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++P+ YN +++ C NG + A + M +R P V +Y IL+ LC+ ++++ A
Sbjct: 63 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDA 121
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+LEDM+ G P+ ++Y TL+N C+ + EA L +M C+PD+ YN ++ G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------------------ 351
+C++ R D K+L++M GC PN ++Y TL+ L
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241
Query: 352 -----------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
C G D+A + QLM +G P + +I G C ++D+A +LE
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ +AG P T+ IV +C ++++ EV
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 334
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 37/368 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI +A+ F +L ++ +++ +IK ++ D AL +R M
Sbjct: 35 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 94
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +C P +++ L + A + + + G PN +YN ++ FC G+
Sbjct: 95 -QRHCAPSVITYTILVDALCKSAR-ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 152
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A LFN+M E PDV +Y IL+ G C++ + LL++M+ G P+ ++Y T
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212
Query: 277 LLNSL-----------------------------------CRKKKLREAYKLLCRMKVKG 301
L++SL C+ +L AY+L M +G
Sbjct: 213 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI YN ++ G CR R DA ++LE M GC P++V+Y ++V GLC D A
Sbjct: 273 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 332
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ +++ + G+ LI G C ++D+A +L E+ + G AP + +++
Sbjct: 333 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392
Query: 422 CAGEEMEK 429
C ++++K
Sbjct: 393 CKADQLDK 400
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 165/343 (48%), Gaps = 9/343 (2%)
Query: 84 YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYA 141
Y Q + S TY IL+ L ++ S D LI P++ TY LI +
Sbjct: 91 YRDMQRHCAPSVITYTILVDALCKSARIS--DASLILEDMIEAGCAPNVVTYNTLINGFC 148
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLP 199
+ D A+ F MLE +C P N +++ RP L + K+G P
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE---RPQDGAKLLQEMVKYGCEP 205
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N +YN +M + +G A+ L M R P ++ +++ C+ Q++ A +L
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M ++G +PD +Y +++ CR ++ +A +LL RM GC PD+V YN++V G C+
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ +A +V E + + G ++V+ TL+ GLC D A+K ++ M G +P
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
LI GFC ++D++ E+L G P T+ +++ ++C
Sbjct: 386 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 428
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ AF AY LF PD +Y L+ G C+ +A LL++M
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G VP Y T++ LC ++ A M+ + C P ++ Y +V C+ R D
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +LEDM GC PN+V+Y TL+ G C G D A M+ SP + LI
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G+C + + +L+E++K G P+ T+
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITY 210
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N ++ F R+ +A +A + ++ C P+ ++Y TL+ G C F A + + M
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+G PH +V + +IKG C+ G+VD A ++ + AP T+ ++V +C +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHC-APSVITYTILVDALCKSARISD 120
Query: 430 LGEVLNEIVK 439
+L ++++
Sbjct: 121 ASLILEDMIE 130
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 191/401 (47%), Gaps = 19/401 (4%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILIT--- 120
L+ Q D LL+ E F++A + HS T+ I++ L + + F S++ D+L+
Sbjct: 88 LLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 121 -LKSEHYPV----------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
L ++ + TP +F L K +A A TF M ++ P + N
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCN 207
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ L+ + + A ++ + + PNT + N++M +C +G + L M
Sbjct: 208 AYMSSLLG-QGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G SY L+ G C K ++ A+ L M G P+ +++ TL++ CR KL+E
Sbjct: 267 LGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQE 326
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A K+ MK P+ V YNT++ G+ ++G A + EDM NG ++++Y TL+
Sbjct: 327 ASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLIL 386
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC Q A ++++ + + P+ S ALI G C D + + ++++G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHP 446
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
+E T+ +++ C E+ + +VL E+V+ I D+R V
Sbjct: 447 NEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVH 487
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++L ++ + T + LI + E L ALK M + +P N ++
Sbjct: 259 ELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGF 318
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
L+ A +F + PNT +YN ++ + GD +A+ + M G+ D
Sbjct: 319 CRAVK-LQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y L+ GLC++++ +A ++++ + VP++ +++ L+ C ++ ++L
Sbjct: 378 ILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYK 437
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M GC+P+ +N ++ FC+ A +VL +M + + + GL QG
Sbjct: 438 SMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQG 497
Query: 356 MFDVAKKYMQLMISKGF 372
+ K+ +Q M K F
Sbjct: 498 KDQLVKELLQEMEGKKF 514
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F+L+KS + G PN +++NI++ AFC N D A + +M R + D + +
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCN 491
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GL + + +LL++M K F+ + L
Sbjct: 492 GLNHQGKDQLVKELLQEMEGKKFLQEPL 519
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLK-YFKLVWGFYEE 132
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M KG
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ E + ++ +C
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V +K D R
Sbjct: 373 KMLREMLSVGLKPDAR 388
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M VKG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 230 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMNG 431
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 150/296 (50%), Gaps = 1/296 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + F +I Y+ + D A K ++ ML F P + +L L ++ + L+ A
Sbjct: 485 PPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSML-LGLSKKGRLQEAR 543
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
DL G+ N ++ +++ + GD + A++L+ +M RG+ PD ++ + GL
Sbjct: 544 DLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGL 603
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ V A + +M KGFVP+ Y +L++ LC KL EA KL M+ KG PDI
Sbjct: 604 SKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDI 663
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N ++ GFC+EGR A +M G P+ V+Y TL+GG C A +++
Sbjct: 664 FTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNK 723
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M + G+ P + + I+GFC+ K+ A +L+EL+ G P+ T+ ++ +C
Sbjct: 724 MYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC 779
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 2/325 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S+ST ++L L + D+L + + PV FT L+ Y + A +
Sbjct: 522 SSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLW 581
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P + ++ L + + A++ F K G +PN YN ++ C
Sbjct: 582 YEMEARGICPDAIAFSAFIDGL-SKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCN 640
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A L +M ++G++PD+ + I++ G C++ ++ A D +M + G PDT++
Sbjct: 641 CGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVT 700
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL+ C+ + A + L +M G +PDI YN + GFC + A +L+++
Sbjct: 701 YNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELI 760
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G +PN V+Y T++ +C M D A ++ F P+ ++ L+ FC G +
Sbjct: 761 AVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPE 819
Query: 394 EACGVLEELLKAGEAPHEDTWVMIV 418
+A ++L K A W++ +
Sbjct: 820 KALIWGQKLNKLLRADFIGYWLVYI 844
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 173/435 (39%), Gaps = 75/435 (17%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R N + I+IL + Y + + +L + + P ++ Y LI Y A
Sbjct: 275 RPCNHNFNIMILCFCQKGYLRVAESLLFVMPK--FCCEPDVYAYNILINAYRIRGRTSDA 332
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
L M++ CKP + I+ N + A +F+ + G+ PN YN +M
Sbjct: 333 LGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVE-ARKIFEGIQEVGLSPNVAMYNTLMS 391
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG------------------------ 245
+ D+ A L+ +M ++G+ PD ++ IL+ G
Sbjct: 392 GYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVP 451
Query: 246 -----------LCRKSQVNRAVDLLEDMLNKGFVPDTLSY-------------------- 274
LC Q++ A+ LEDML KG P +++
Sbjct: 452 DCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAY 511
Query: 275 ---------------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+++L L +K +L+EA LL +M KG + V + ++ G+ +
Sbjct: 512 KIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKV 571
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G A + +M + G P+ +++ + GL G+ + A + M KGF P+ V
Sbjct: 572 GDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVY 631
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++LI G CN GK+ EA + E+ + G P T +I+ C M+ + E+
Sbjct: 632 NSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHH 691
Query: 440 VEIKGDTRIVEAGIG 454
+ + DT IG
Sbjct: 692 IGVTPDTVTYNTLIG 706
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 165/384 (42%), Gaps = 30/384 (7%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY-- 110
++S + + S C ++A++S LLA+++ + R+ S S +L+ + KY
Sbjct: 149 NDSDATVHSCCIAAHILAAESLQLLAQDVISWVIRR--IGASRSAHLVEFMWANHHKYES 206
Query: 111 -FSLIDDIL--------------ITLKSEHYPVTPS------LFTYLIKIYAESNLPDRA 149
FS+++ ++ I + V PS LF L+++ ++
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSV---- 262
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
K R M+ +P N I+ L + YLR A L K P+ +YNI++
Sbjct: 263 WKLLRGMIRDGPRPCNHNFN-IMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILIN 321
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
A+ G S A + M + G P + ++ ++ C + V A + E + G P
Sbjct: 322 AYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSP 381
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ Y TL++ + + + +A L M+ KG PD +N +V G + G+ D+ ++
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
D + +P+ Y V GLC G D A ++++ M+ KG P +++I +
Sbjct: 442 RDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRA 501
Query: 390 GKVDEACGVLEELLKAGEAPHEDT 413
G D A + +L G P T
Sbjct: 502 GFEDNAHKAYKIMLMFGLVPSSST 525
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 35/288 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV-------- 236
+++LF+ ++P+ Y++ + C+ G + A M E+G+ P V
Sbjct: 437 SYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIA 496
Query: 237 ------------ESYRILMQ---------------GLCRKSQVNRAVDLLEDMLNKGFVP 269
++Y+I++ GL +K ++ A DLL M++KG
Sbjct: 497 AYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPV 556
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ +++T LL+ + A+ L M+ +G PD + ++ + G + G +A +
Sbjct: 557 NKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAF 616
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+M G +PN Y +L+ GLC+ G A K + M KG P ++ +I GFC
Sbjct: 617 SEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE 676
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G++ A E+ G P T+ ++ C +M E LN++
Sbjct: 677 GRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKM 724
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISI-AYTLFNKMFERGVMPDVESYRILMQGLC 247
F A+ H + N +MR F N +++ + + ++M E GV P + IL + L
Sbjct: 196 FMWANHHKYESDFSILNTLMRGF-MNSEMAYESLEILSRMREVGVRPSSSAISILFRLLL 254
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R LL M+ G P ++ ++ C+K LR A LL M C PD+
Sbjct: 255 RVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVY 314
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ + GR DA L M NGC P+L+++ T++ C++G A+K + +
Sbjct: 315 AYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGI 374
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G SP+ ++ + L+ G+ V +A + EE+ G AP T+ ++V
Sbjct: 375 QEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILV 425
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 4/332 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ IL+ L R+ +L +K +++ LI Y+++ +A K M
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ +C P I++ L + A L G PN +YN+++ C
Sbjct: 72 VKNHCLPTVVTYTNIVDGL-CKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERK 130
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A + +M RG PDV +Y ++GLC+ +V+ A L M PD +SYTT
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTT 187
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N LC+ L A ++L +M +GC PD+V Y++++ GFC+ G A +L+ M G
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C PN+V+Y +L+G L G A+ + M +GF+P +A I G C +V +A
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
V + +++ G P+ ++ M+V ++C +E++
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELD 339
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 159/312 (50%), Gaps = 6/312 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FT+ L++ SN ++A + M E C P N ++ +++ + AF
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ-AFK 66
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
K+ LP +Y ++ C G A L ++M ++G P++ +Y ++++GLC
Sbjct: 67 FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +++ A +LE+M +G+ PD ++Y + + LC+ ++ EA K L RM V PD+V
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVV 183
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y TV+ G C+ G A ++L+ M + GC P++V+Y +L+ G C G + A + M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G P+ ++L+ +G + +A +L E+ + G P ++ + +C E +
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303
Query: 428 EKLGEVLNEIVK 439
+K V + +V+
Sbjct: 304 KKAKAVFDRMVE 315
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR-NYLRPA 185
TP + TY LI + + +RA+ SML+ C+P N +L L HR ++ A
Sbjct: 214 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL--HRLGHIGKA 271
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ + G P+ SYN + C + A +F++M ERG P+ SY +L++
Sbjct: 272 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR-MKVKGCNP 304
LC+K +++ A+ L+E K + D L YT LL+ LC+ + EA L + + K C P
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 391
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN ++ C+ + A ++ + M C N+V++ LV GLC A+ +
Sbjct: 392 DVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETML 450
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ +GF P F L+ C GK A + EE +K G P T+ ++ +
Sbjct: 451 LTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL 507
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 128/242 (52%), Gaps = 3/242 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ ++ I++R C + + A L +M E G +PD Y L+ G + +A
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +M+ +P ++YT +++ LC+ + ++A KLL M+ KGC+P+I YN +V G C
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
E + +A K+LE+M G P++V+Y + + GLC D A+K++ M +P
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVS 184
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+I G C G +D A +L+++ G P T+ ++ C G E+E+ +L+ ++
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244
Query: 439 KV 440
K+
Sbjct: 245 KL 246
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 3/211 (1%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M ++ PD ++ IL++GLCR +Q+ +A LL M G VPD Y L++ + K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+A+K L M C P +V Y +V G C+ GR DA K+L++M GC PN+ +Y
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V GLC++ D AKK ++ M +G+ P ++ IKG C +VDEA + L +
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA---RKFLARMP 177
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P ++ ++ +C +++ +L+++
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 14/281 (4%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AF 186
+P+++TY + E +R L + MLE + +VT+ ++++
Sbjct: 112 SPNIYTY--NVIVEGLCEERKLDEAKKMLE------EMAVRGYFPDVVTYNSFIKGLCKC 163
Query: 187 DLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
D A K V P+ SY ++ C +GD+ A + ++M RG PDV +Y L
Sbjct: 164 DRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSL 223
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ +V RA+ LL+ ML G P+ ++Y +LL +L R + +A +L M+ +G
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 283
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V YN + G C+ R A V + M GC PN SY LV LC + D A
Sbjct: 284 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAIT 343
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
++ K + L+ G C G+ DEAC + ++L
Sbjct: 344 LVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 26/327 (7%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDI-LITLKSEHYPVTPSL- 132
AK +FD + PN S+Y +L+ +L + K L D I L+ E Y + L
Sbjct: 306 AKAVFDRMVERGCTPN----ASSYSMLVEELCKKK--ELDDAITLVEQAREKYQIVDILL 359
Query: 133 FTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTH--RNYLRPAFDLF 189
+T L+ + D A F +L E C+P N +L+ +H R + A +
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD---SHCKRRQIDKALQIH 416
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K + N ++NI++ C + +S A T+ M + G +PD +Y L+ +C+
Sbjct: 417 KQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A++L E+ + G VPD ++Y+ L+ L + EAY L ++ D+ +
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALW 528
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY-RTLVGGLCDQGMFDVAKKYMQLMI 368
N ++LG+ G K+ ++ + PN ++ + + G L A+ +
Sbjct: 529 NAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAV 588
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEA 395
GF P V++ LI F G ++EA
Sbjct: 589 KGGFFPDLFVANTLIDVFAKCGDLEEA 615
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ IL+ L S + +L+T+ E + P TY L+ + AL+ F
Sbjct: 429 TWNILVHGLCVDDRLSDAETMLLTMVDEGF--IPDFVTYGTLVDAMCKCGKSAAALELFE 486
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
++ C P + ++ LV H N A+ LF + +N M+ + N
Sbjct: 487 EAVKGGCVPDVVTYSALITGLV-HENMAEEAYLLFTKL-------DVALWNAMILGYAEN 538
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQG-LCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + LF ++ E V P+ ++ + G L + + +A L + + GF PD
Sbjct: 539 GSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFV 598
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMK 298
TL++ + L EA ++ MK
Sbjct: 599 ANTLIDVFAKCGDLEEARRIFYSMK 623
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 1/357 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L AK + ++++++ + P + F LI + L ++ + M
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQM 274
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C P + I++ + ++ A D+ +G+ PN YN +++ C
Sbjct: 275 PEHGCTPDLRMYATIIDGICKDGHH-EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +MF+ D ++ IL+ C+ V+R ++LLE ML G +PD ++YTT
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 393
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N C++ + EA LL M GC P+ + Y V+ G CR R +DA +++ M G
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
CLPN V++ TL+ +C +G+ + A + ++ M+ G SP +I G GK +EA
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+L ++ G P+ + + + +K+ ++ + I ++ D + A I
Sbjct: 514 ELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 570
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 165/336 (49%), Gaps = 5/336 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+T+ LI L R F + + L + EH TP L Y +I + + A
Sbjct: 249 ATFNTLIAYLCRNGLFEQVHEALSQMP-EH-GCTPDLRMYATIIDGICKDGHHEVANDIL 306
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M + KP N +L+ L + + A DL + + ++NI++ FC
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERW-EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 365
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG + L +M E G +PDV +Y ++ G C++ V+ AV LL++M G P+T+S
Sbjct: 366 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS 425
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT +L LCR ++ +A +L+ M +GC P+ V +NT++ C++G A ++L+ M
Sbjct: 426 YTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQML 485
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
NGC P+L+SY T++ GL G + A + + +MI+KG +P+ + ++ G+ D
Sbjct: 486 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTD 545
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ + + + A + ++ +C E ++
Sbjct: 546 KIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 581
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 3/322 (0%)
Query: 83 DYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
D SR P++ + + Y ++ L A+ + +D+L + E P+ F L+ +
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
++ L DR ++ MLE C P ++ + A L K+ G PN
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC-KEGLVDEAVMLLKNMSACGCKPN 422
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
T SY I+++ C A L + M ++G +P+ ++ L+ +C+K V +A++LL+
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
ML G PD +SY+T+++ L + K EA +LL M KG P+ + Y+++ REG
Sbjct: 483 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 542
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R ++ + + + Y ++ LC + D A + M+S G P+ S
Sbjct: 543 RTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 602
Query: 381 ALIKGFCNVGKVDEACGVLEEL 402
LI+G + G V EA +L EL
Sbjct: 603 ILIRGLASEGLVREAQDLLSEL 624
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 38/350 (10%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +TY +++ L AL M C P + ILE + R
Sbjct: 103 PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF-RS 161
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + H G ++ + N+++ A C G + L K+ G PD+ SY +++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + +L+ +M+ G P+ ++ TL+ LCR + ++ L +M GC P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------- 351
D+ Y T++ G C++G A +L MPS G PN+V Y T++ GL
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341
Query: 352 ----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
C G+ D + ++ M+ G P +I GFC
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G VDEA +L+ + G P+ ++ +++ +C E E+++ +++
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 451
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
D ++ G +YN M+ +C G ++ A L + V P+ +Y +++ L
Sbjct: 62 DAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSL 118
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C + + A+ +L++M +G +L + CR R A + L + KGC D
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDS 178
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ N VV C +G + ++L +PS GC P++VSY ++ GLC +D ++ M
Sbjct: 179 GNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVE 238
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ G P+ + + LI C G ++ L ++ + G P + I+ IC
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298
Query: 427 MEKLGEVLNEI 437
E ++L+ +
Sbjct: 299 HEVANDILSRM 309
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R+ C G + A + G V +Y ++ G CR QV A L +
Sbjct: 50 LIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---P 103
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC--NPDIVHYNTVVLGFCREGRAID 324
P+ +Y ++ SLC + + +A +L M ++GC P + H ++ CR G
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCH--VILEAACRGGGFRS 161
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + L+ + + GC + + +V +C+QG D + ++ + S G P +A++K
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C + D+ ++ E+++ G P+ T+ ++ +C E++ E L+++ +
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281
Query: 445 DTRI 448
D R+
Sbjct: 282 DLRM 285
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 181/351 (51%), Gaps = 5/351 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ + DP + + S++ +++ + S Y +LI K G+AK F I++++ T
Sbjct: 61 APNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQAKMFDEIEEVMST 120
Query: 121 LKSEHY-PVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K E + F L++IY + +RA++ M +F C P K N IL LLV+
Sbjct: 121 IKLEKRCRFSEDFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSA 180
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + +F SA K GV + NI+++ C +G++ A L ++ ++ P+V +
Sbjct: 181 KLF-DEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMT 239
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L++G C K + A LLE M + PDT+++ L++ L +K ++ E LL RMK
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+KGC P+ Y V+ G + R ++A +++ M S G P+ +SY+ +V GLC+
Sbjct: 300 LKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVA 359
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
++ M++ GF P + + C V K +++ L+ + E P
Sbjct: 360 EMDWVLRKMVNHGFVPKTGMWWKAV--CCVVSKNNDSQANLDRITAGKETP 408
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%)
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++NRA+++L M + G P S+ +LN L K E +K+ G D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N ++ G C G A ++L++ P PN++++ L+ G C++G F+ A K ++ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ P + LI G G+V+E +LE + G P+ T+
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTY 310
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVVLGFCREGRA 322
K + P Y L+N + K E +++ +K+ K C + YN + + GR
Sbjct: 89 KDYQPTESLYALLINKFGQAKMFDEIEEVMSTIKLEKRCRFSEDFFYNLMRIYGNLAGRI 148
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A ++L MP GC P+ S+ ++ L +FD K G + L
Sbjct: 149 NRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
IKG C G ++ A +L+E K P+ T+ ++ C + E+ ++L + K I
Sbjct: 209 IKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 443 KGDT 446
+ DT
Sbjct: 269 EPDT 272
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 147/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 141 IRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 200
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 201 LINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQS 260
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAF 320
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A VL E+L AG P T+ MI+ +
Sbjct: 321 EHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEF 380
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 381 CKKGDVWTGSKLLKEM 396
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 1/303 (0%)
Query: 107 RAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+ KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 102 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVV 161
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N ++ + + L F L + H GV P+ +Y++++ C + A LF++
Sbjct: 162 SFNTLMNGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 220
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 221 MLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 280
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L++A+ L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 281 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTA 340
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ GLC +G + A+K ++ M+S G P +I FC G V +L+E+ + G
Sbjct: 341 LISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 400
Query: 407 EAP 409
P
Sbjct: 401 HVP 403
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + +S D A++ ++ ML + P N ++ L + L+ A DL
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-KKGDLKQAHDLIDEM 291
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 351
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PDT +YT ++N C+K + KLL M+ G P +V YN +
Sbjct: 352 LDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
Query: 313 VLG 315
+ G
Sbjct: 412 MNG 414
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 22/374 (5%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI-----------------TLKSEHYP 127
S PNF+HS ++ +I L R++ +++ L +
Sbjct: 226 TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG 285
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPA 185
P +F L++ Y ++ + FR + K L +N LL + ++ A
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAFRVL---KSKGLCVSINACNSLLGGLVKVGWVDLA 342
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++++ + GV N + NIM+ A C N I + + M E+GV PDV +Y L+
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR+ + A +L++ M KG P +Y ++N LC+ K A +L M G +PD
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN +++ CR +DA ++ ++MPS G +P+LVS+ L+G L G D A KY +
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M + G +P + LI GFC G + EA V +E+L+ G T+ I+ +C +
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582
Query: 426 EMEKLGEVLNEIVK 439
+ + E+ E+ +
Sbjct: 583 MLSEADELFTEMTE 596
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 133/261 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF+L S G+ P +YN ++ C G A + ++M + G+ PD +Y I
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR + A + ++M ++G VPD +S++ L+ L + L +A K MK G
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y ++ GFCR G +A KV ++M GC ++V+Y T++ GLC + M A
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +G P F LI G+ G +++A + E +++ P T+ ++
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C G EMEK+ E+ N+++ I
Sbjct: 649 CKGSEMEKVNELWNDMISRRI 669
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 155/308 (50%), Gaps = 1/308 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI + + + ALK MLE C N IL L + L A +LF
Sbjct: 535 IYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK-MLSEADELFTE 593
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ + +G+++ A TLF M +R + PDV +Y L+ G C+ S+
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ + +L DM+++ P+ +SY L+N C + EA++L M KG I+ NT
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+V G+CR G A+ A + L +M G +P+ ++Y TL+ G + D A + M + G
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + ++ GF G++ EA ++ ++++ G P T+ ++ +++
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 833
Query: 432 EVLNEIVK 439
V +E+++
Sbjct: 834 RVHDEMLQ 841
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 148/317 (46%), Gaps = 2/317 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
LK P T + L++ N+ D A + F M P + ++ LL +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMD-AERIFDEMPSQGVVPDLVSFSALIGLL-SKNG 512
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A F+ G+ P+ Y I++ FC NG +S A + ++M E+G DV +Y
Sbjct: 513 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ GLC++ ++ A +L +M +G PD ++TTL+N + + +A L M +
Sbjct: 573 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
PD+V YNT++ GFC+ ++ DM S PN +SY L+ G C+ G A
Sbjct: 633 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 692
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M+ KGF + ++KG+C G +A L +L G P T+ ++
Sbjct: 693 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 752
Query: 421 ICAGEEMEKLGEVLNEI 437
E M++ ++N++
Sbjct: 753 FIKEENMDRAFALVNKM 769
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 164/367 (44%), Gaps = 44/367 (11%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E V P + TY LI Y L + A + SM KP N I+ L Y
Sbjct: 385 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 444
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
LR A + K G+ P+T +YNI++ C N ++ A +F++M +GV+PD+ S
Sbjct: 445 LR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503
Query: 239 --------------------------------YRILMQGLCRKSQVNRAVDLLEDMLNKG 266
Y IL+ G CR ++ A+ + ++ML +G
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
D ++Y T+LN LC++K L EA +L M +G PD + T++ G+ ++G A
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ E M P++V+Y TL+ G C + + MIS+ P+ LI G+
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
CN+G V EA + +E+++ G T IV C K E L+ ++ +KG
Sbjct: 684 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML---LKG-- 738
Query: 447 RIVEAGI 453
IV GI
Sbjct: 739 -IVPDGI 744
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ + ++ + + +KG + +LL L + + A+++ +
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G ++ N ++ C+ + + L DM G P++V+Y TL+ C QG+ +
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M M KG P +A+I G C GK A GVL+E+LK G +P T+ +++
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
+ C + M + +E+ + D A IGL
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 507
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 10/218 (4%)
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDML----NKGFVPDTLSYTTLLNSLCRKKKLR 288
+PD ++ + M RKS V+R V+++E ++ N G P L + L+ + + +KLR
Sbjct: 252 LPDAQAVILRM---VRKSGVSR-VEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLR 305
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
E + +K KG I N+++ G + G A ++ +++ +G N+ + ++
Sbjct: 306 EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 365
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC + K ++ M KG P + LI +C G ++EA +++ + G
Sbjct: 366 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK 425
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P T+ I+ +C + + VL+E++K+ + DT
Sbjct: 426 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 179/376 (47%), Gaps = 26/376 (6%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYF-------------------SLIDDILITLKSEH 125
S PNF+HS ++ +I L R++ +++ +++T +
Sbjct: 122 TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYG--N 179
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLR 183
P +F L++ Y ++ + FR + K L +N LL + ++
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVL---KSKGLCVSINACNSLLGGLVKVGWVD 236
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A+++++ + GV N + NIM+ A C N I + + M E+GV PDV +Y L+
Sbjct: 237 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
CR+ + A +L++ M KG P +Y ++N LC+ K A +L M G +
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 356
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD YN +++ CR +DA ++ ++MPS G +P+LVS+ L+G L G D A KY
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M + G +P + LI GFC G + EA V +E+L+ G T+ I+ +C
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476
Query: 424 GEEMEKLGEVLNEIVK 439
+ + + E+ E+ +
Sbjct: 477 EKMLSEADELFTEMTE 492
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 134/261 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF+L S G+ P +YN ++ C G A + ++M + G+ PD +Y I
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR + A + ++M ++G VPD +S++ L+ L + L +A K MK G
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y ++ GFCR G +A KV ++M GC+ ++V+Y T++ GLC + M A
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +G P F LI G+ G +++A + E +++ P T+ ++
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C G EMEK+ E+ N+++ I
Sbjct: 545 CKGSEMEKVNELWNDMISRRI 565
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 1/287 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI + + + ALK MLE C N IL L + L A +LF
Sbjct: 431 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK-MLSEADELFTE 489
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ + +G+++ A TLF M +R + PDV +Y L+ G C+ S+
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ + +L DM+++ P+ +SY L+N C + EA++L M KG I+ NT
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+V G+CR G A+ A + L +M G +P+ ++Y TL+ G + D A + M + G
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + ++ GF G++ EA ++ ++++ G P T+ ++
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 130/263 (49%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L++ L A F+ G+ P+ Y I++ FC NG +S A + ++M E+G +
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y ++ GLC++ ++ A +L +M +G PD ++TTL+N + + +A L
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + PD+V YNT++ GFC+ ++ DM S PN +SY L+ G C+
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + M+ KGF + ++KG+C G +A L +L G P T+
Sbjct: 583 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 642
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ E M++ ++N++
Sbjct: 643 NTLINGFIKEENMDRAFALVNKM 665
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 165/367 (44%), Gaps = 44/367 (11%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E V P + TY LI Y L + A + SM KP N I+ L Y
Sbjct: 281 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 340
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
LR A + K G+ P+T +YNI++ C N ++ A +F++M +GV+PD+ S
Sbjct: 341 LR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399
Query: 239 --------------------------------YRILMQGLCRKSQVNRAVDLLEDMLNKG 266
Y IL+ G CR ++ A+ + ++ML +G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
V D ++Y T+LN LC++K L EA +L M +G PD + T++ G+ ++G A
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ E M P++V+Y TL+ G C + + MIS+ P+ LI G+
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
CN+G V EA + +E+++ G T IV C K E L+ ++ +KG
Sbjct: 580 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML---LKG-- 634
Query: 447 RIVEAGI 453
IV GI
Sbjct: 635 -IVPDGI 640
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG + +LL L + + A+++ + G ++ N ++ C+ + +
Sbjct: 213 KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 272
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
L DM G P++V+Y TL+ C QG+ + A + M M KG P +A+I
Sbjct: 273 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 332
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C GK A GVL+E+LK G +P T+ +++ + C + M + +E+ +
Sbjct: 333 GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 392
Query: 445 DTRIVEAGIGL 455
D A IGL
Sbjct: 393 DLVSFSALIGL 403
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 10/218 (4%)
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDML----NKGFVPDTLSYTTLLNSLCRKKKLR 288
+PD ++ + M RKS V+R V+++E ++ N G P L + L+ + + +KLR
Sbjct: 148 LPDAQAVILRM---VRKSGVSR-VEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLR 201
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
E + +K KG I N+++ G + G A ++ +++ +G N+ + ++
Sbjct: 202 EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 261
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC + K ++ M KG P + LI +C G ++EA +++ + G
Sbjct: 262 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK 321
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P T+ I+ +C + + VL+E++K+ + DT
Sbjct: 322 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 182/404 (45%), Gaps = 44/404 (10%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V ++ Q DPL A IF+ ++ F+H+ TY +I KLG F ++ +L+ +
Sbjct: 7 PKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEM 66
Query: 122 K-SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + + ++ ++ Y A+ F M +NC+P N I+ +LV +
Sbjct: 67 RLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEY-G 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC---------------------------- 212
Y A ++ G+ P+ ++ I +++FC
Sbjct: 126 YFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYC 185
Query: 213 ------FNGDISI-AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+ + + AY LFNKM G+ P + ++ LM LC+K + LL +L
Sbjct: 186 TVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKN 245
Query: 266 GFVPDTLSYTTLLNSLCRK-------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
G P+ ++ + LCRK K+ EA L +M KG PD YNT++ G+ +
Sbjct: 246 GVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G+ DA ++L+D G +P+ +Y +L+ G+C G D A + + KG P +
Sbjct: 306 VGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVL 365
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ LIKG G V +A ++ ++ K G +P T+ +++ +C
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 55/406 (13%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ + +P+ N+ IL+ YF+ + + +K E FT IK
Sbjct: 100 ERMDFYNCEPSIFSYNAIMNILV----EYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKS 155
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDLFKSAHKH 195
+ + P AL+ +M C +LN ++ V NY A++LF +
Sbjct: 156 FCRTKRPLAALRLLNNMPSQGC-----ELNAVVYCTVISGFYEENYQVEAYELFNKMLRL 210
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK------ 249
G+ P+ ++N +M C G + L NK+ + GV P++ ++ I +QGLCRK
Sbjct: 211 GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270
Query: 250 -SQVNRAVDLLEDMLNKG-----------------------------------FVPDTLS 273
S+V A + L M+NKG FVPD +
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFT 330
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +L+ +C+ + A L KG P IV YNT++ G ++G + A +++ DM
Sbjct: 331 YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS 390
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G P++ +Y ++ GLC G A + I+KG+ P + LI G+C K+D
Sbjct: 391 KEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMD 450
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A G+L+ + G P T+ I+ +C + E + E I++
Sbjct: 451 NAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 39/352 (11%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P FTY LI + D AL F L KP N +++ L + + + A
Sbjct: 325 VPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGL-SQQGLVLKAL 383
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L K G+ P+ +YN+++ C G +S A L N +G +PD+ ++ L+ G
Sbjct: 384 QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGY 443
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++ A+ +L+ M + G PD ++Y ++LN LC+ K + + + KGC P+I
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG-------MF-- 357
+ YN ++ C+ + +A +LE++ + G +P+ VS+ T++ G C+ G +F
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563
Query: 358 ---------------------------DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
D+A+K M KG P +I GFC VG
Sbjct: 564 MEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVG 623
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
V+ L + ++ G P T+ ++ +C + + +++ +V+ +
Sbjct: 624 NVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGV 675
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 132/248 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A + K A G +P+ +Y ++ C +GDI A LF + +G+ P + Y
Sbjct: 309 IQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNT 368
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GL ++ V +A+ L+ DM +G PD +Y ++N LC+ + +A LL KG
Sbjct: 369 LIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKG 428
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDI +NT++ G+C+ + +A +L+ M S+G P++++Y +++ GLC +
Sbjct: 429 YLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVM 488
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++++ KG P+ + LI+ C KV EA +LEE+ G P ++ ++
Sbjct: 489 ETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGF 548
Query: 422 CAGEEMEK 429
C ++++
Sbjct: 549 CNNGDLDE 556
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
A+ LPD + TF ++++ CK L + A + S HGV P+
Sbjct: 426 AKGYLPD--IFTFNTLIDGYCKRLK----------------MDNAIGILDSMWSHGVTPD 467
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YN ++ C F + E+G +P++ +Y IL++ LC+ +V A+DLLE
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM--KVKGCNPDIVHYNTVVLGFCR 318
++ N+G +PD +S+ T+++ C L EAY+L RM + + C+ + YN ++ F
Sbjct: 528 EIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHT-VATYNIMINAFSE 586
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ A K+ +M GC P+ +YR ++ G C G + ++ I GF P +
Sbjct: 587 KLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTT 646
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+I C +V EA G++ +++ G P
Sbjct: 647 FGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 161/363 (44%), Gaps = 43/363 (11%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L + S+ + ++ +I + E N A + F ML P N+++ +L
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILC 227
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA-----------YTLFN 225
+ +L+ L K+GV PN ++NI ++ C G + A + + N
Sbjct: 228 K-KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVN 286
Query: 226 KMFE-------------------------------RGVMPDVESYRILMQGLCRKSQVNR 254
K E +G +PD +Y L+ G+C+ ++
Sbjct: 287 KGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDH 346
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ L E+ L KG P + Y TL+ L ++ + +A +L+ M +G +PDI YN V+
Sbjct: 347 ALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVIN 406
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ G DA +L + G LP++ ++ TL+ G C + D A + M S G +P
Sbjct: 407 GLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTP 466
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
++++ G C K ++ + +++ G P+ T+ +++ +C ++ + ++L
Sbjct: 467 DVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLL 526
Query: 435 NEI 437
EI
Sbjct: 527 EEI 529
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 14/289 (4%)
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT-KSYNIMMRAFCFNGDISIAYT 222
LPK + +L+ ++ L+ A +F S K +T +Y M+ F+G+
Sbjct: 6 LPKHVAAVLKY---QKDPLK-ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMER 61
Query: 223 LFNKM---FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
+ +M + ++ V Y M+ RK +V AVD+ E M P SY ++N
Sbjct: 62 VLMEMRLNVDNSLLEGV--YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMN 119
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
L +A+K+ RMK +G PD+ + + FCR R + A ++L +MPS GC
Sbjct: 120 ILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL 179
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N V Y T++ G ++ A + M+ G PH + + L+ C G + E +L
Sbjct: 180 NAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLL 239
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEME----KLGEVLNEIVKVEIKG 444
++LK G P+ T+ + + +C +E K+ E N + K+ KG
Sbjct: 240 NKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 45/246 (18%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ VTP + TY ++ ++ P+ ++TF+ ++E C P N ++E L R +
Sbjct: 462 HGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARK-VT 520
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF------------------- 224
A DL + G++P+ S+ ++ FC NGD+ AY LF
Sbjct: 521 EALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIM 580
Query: 225 -----------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++M ++G PD +YR+++ G C+ VN D L + GF
Sbjct: 581 INAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGF 640
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VP ++ ++N LC + ++ EA ++ M G P+ VV F + +A+ A K
Sbjct: 641 VPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE-----AVVTIFDADKKAVAAPK 695
Query: 328 VL-EDM 332
++ ED+
Sbjct: 696 IIVEDL 701
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 179/377 (47%), Gaps = 15/377 (3%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
C V ++ + D +A+++ PN L +G + ++ ++ T K
Sbjct: 130 CIVAQIATASKDLKMARKLIQDFWVNPN------------LDVG-VSFGHFVEQLIYTYK 176
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
+ P +F ++ E+ + D A K F ML + N + L + +
Sbjct: 177 D--WGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 234
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A +F + GV NT SYNI+ + C G + A+ L +M RG +PDV SY +
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++ R + L+E+M KG P+ +Y ++ LC+ K+ EA ++L M +G
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V Y T++ GFC+ G A ++ ++M P+ ++Y ++ GLC G A K
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+ K P ALI G+C GK+ EA + ++L+ G P+ T+ + +C
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474
Query: 423 AGEEMEKLGEVLNEIVK 439
E++ E+L+E+ +
Sbjct: 475 KCGEVDTANELLHEMCR 491
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 176/387 (45%), Gaps = 17/387 (4%)
Query: 44 PEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILIL 103
P+ S++ N +G RV KLI E +PN TY +IL
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLI----------EEMQIKGLKPN----PYTYNGVIL 331
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
L + + + +L + SE ++T LI + + A + F M + P
Sbjct: 332 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 391
Query: 164 -LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
I L T R + A LF + P+ +Y ++ +C G + A++
Sbjct: 392 DFITYTAVICGLCQTGR--VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 449
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
L N+M + G+ P++ +Y L GLC+ +V+ A +LL +M KG + +Y +L+N LC
Sbjct: 450 LHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 509
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+ + +A KL+ M+V G +PD V Y T++ +C+ + A ++L M P +V
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 569
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
++ L+ G C GM + +K ++ M+ KG P+ + ++LIK +C + + +
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEK 429
G P +T+ +++ C M++
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKE 656
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 2/277 (0%)
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTL 223
P+ + ++LV L A LF +G+L + S N+ + + D I IA +
Sbjct: 182 PRVFDIFFQVLV-EAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F + E GV + SY I+ LC+ +V A LL M +G +PD +SY+T++N C+
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+L+ KL+ M++KG P+ YN V+L C+ G+ +A +VL +M S G P+ V
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ G C G A + M + SP F A+I G C G+V EA + E++
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
P E T+ ++ C +M++ + N+++++
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 121/225 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ AF L + G+ PN +Y + C G++ A L ++M +G+ ++ +Y
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ +++AV L++DM GF PD ++YTTL+++ C+ +++ A++LL +M +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P +V +N ++ GFC G D K+L+ M G +PN +Y +L+ C +
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ + M +KG P + + LIKG C + EA + +++ G
Sbjct: 624 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 153/352 (43%), Gaps = 38/352 (10%)
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ L+ E P + +Y +I Y + R LK M KP P N ++ LL+
Sbjct: 275 LLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVI-LLL 333
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ A + + G+ P+ Y ++ FC G++S AY LF++M +R + PD
Sbjct: 334 CKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDF 393
Query: 237 -----------------------------------ESYRILMQGLCRKSQVNRAVDLLED 261
+Y L+ G C++ ++ A L
Sbjct: 394 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 453
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML G P+ ++YT L + LC+ ++ A +LL M KG +I YN++V G C+ G
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 513
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A K+++DM G P+ V+Y TL+ C A + ++ M+ + P +
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
L+ GFC G +++ +L+ +L+ G P+ T+ ++ Q C M E+
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEI 625
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 131 SLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+++TY L+ ++ D+A+K + M P +++ R +R A +L
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR-AHEL 555
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ + P ++N++M FC +G + L M E+G+MP+ +Y L++ C
Sbjct: 556 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 615
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
++ + ++ M KG VPD +Y L+ C+ + ++EA+ L M KG N +
Sbjct: 616 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 675
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
YN ++ GF + + ++A ++ E M G + + Y D+G ++
Sbjct: 676 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELT 727
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L K G P+ +Y +M A+C + ++ A+ L +M +R + P V ++ +LM
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + LL+ ML KG +P+ +Y +L+ C + +R ++ M KG P
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D YN ++ G C+ +A + DM G + SY L+ G + F A++
Sbjct: 637 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 696
Query: 365 QLMISKGF 372
+ M +G
Sbjct: 697 EQMRREGL 704
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 145/322 (45%), Gaps = 38/322 (11%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +TY LI E AL ML C P N +LE R Y R
Sbjct: 2 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGY-RQ 60
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L G PN +YN++M C GD+ A L + G P +Y +++
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 245 GLC-----------------------------------RKSQVNRAVDLLEDMLNKGFVP 269
GLC RK + +A+ LLE M G
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ ++Y ++N LC ++ + A LL +MK GC PDIV YNT++ G C R +DA +++
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
++M NGCLP+ V++ TL+G LC +G+ A + + M KG +P+ +I G
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 390 GKVDEACGVLEELLKAGEAPHE 411
K+D+A + E+ G P +
Sbjct: 301 TKLDQALELFNEMGHKGFNPDK 322
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 168/345 (48%), Gaps = 11/345 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKL-GRAKYFSLIDDILITLKS-EHYPVTPSLFTY 135
A E+ D R +N TY +L+ + G +DD L L++ + PS Y
Sbjct: 61 AMELIDLM-RAEGCTPNNVTYNVLMDGMCGEGD----VDDALELLRNLPSHGCKPSTVNY 115
Query: 136 --LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
++K + A + ML NC P N ++ L + L+ A L +
Sbjct: 116 NTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLC-RKGLLQQAIQLLEKMS 174
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
KHG N +YN ++ C ++ A L +KM G PD+ +Y L++GLC ++
Sbjct: 175 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWV 234
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A +L+++M G +PD +++ TL+ LC+K + +A ++ +M KGC P+ + Y+T++
Sbjct: 235 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 294
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G + + A ++ +M G P+ + Y+ L L D + A + ++ + G S
Sbjct: 295 SGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGIS 353
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
PH + +A++ G C GK + A ++ ++ +G P + T+V+++
Sbjct: 354 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 398
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 126/243 (51%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V PN +YN ++ C G + A ++ + M RG PDV +Y IL++ C+ +A+
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L++ M +G P+ ++Y L++ +C + + +A +LL + GC P V+YNTV+ G
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R DA +++ +M C PN ++ ++ LC +G+ A + ++ M G + +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+A+I G C VD A G+L ++ G P T+ ++ +C+ E+++
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 437 IVK 439
+ +
Sbjct: 243 MTQ 245
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 39/283 (13%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
+ +T+ ++I L R I + K + T ++ TY +I E D A+
Sbjct: 146 NEATFNVVIYSLCRKGLLQ--QAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 203
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
M + CKP N +L+ L + ++ A +L + ++G LP+ ++N ++
Sbjct: 204 LLSKMKSYGCKPDIVTYNTLLKGLCSAARWV-DAEELMDNMTQNGCLPDNVTFNTLIGFL 262
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD- 270
C G + A +F +M ++G P+ +Y ++ GL + +++++A++L +M +KGF PD
Sbjct: 263 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 322
Query: 271 ---------------------------------TLSYTTLLNSLCRKKKLREAYKLLCRM 297
T+ Y +L LCR K A ++ M
Sbjct: 323 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 382
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
GC PD + Y ++ G EG +A ++L + S L N
Sbjct: 383 VSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVN 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 113 LIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE--FNCKPLPKQL 168
++D I + + TP+ TY +I A++ D+AL+ F M FN P ++
Sbjct: 268 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN----PDKI 323
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
++L + + + A + G+ P+T YN ++ C NG A + M
Sbjct: 324 YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMV 383
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G MPD +Y IL++GL + +N A +LL + ++ + ++L
Sbjct: 384 SSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSL 427
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 147/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 139 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSV 198
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 199 LINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT+ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 259 LSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAF 318
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + V ALI G C G+ +A +L E+L G P+ T+ MI+ +
Sbjct: 319 EHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEF 378
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 379 CKKGDVWTGSKLLKEM 394
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 114/235 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + ++ E G + + ILM C++ + A + + + G P +S+ TL+
Sbjct: 106 LVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLM 165
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N R L E ++L M G PD+ Y+ ++ G C+E + DA ++ ++M G +
Sbjct: 166 NGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 225
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + L G C G + +A +
Sbjct: 226 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDL 285
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++E+ G P + T+ ++ C +ME E +++ I+ D + A I
Sbjct: 286 IDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALI 340
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N L + + L+ A DL
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYN-TLTYGLCKKGDLKQAHDLIDEM 289
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D Y L+ GLC++ +
Sbjct: 290 SMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRS 349
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
A +L +ML+ G P+ +YT ++N C+K + KLL M+
Sbjct: 350 VDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N++ A + K G+ P ++N ++ C G I A LFN+M RG P+V SY
Sbjct: 137 NHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISY 196
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ GLC+ + AVD+ + M G PD ++Y T+++SLC+ + + +A + L M
Sbjct: 197 NTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLD 256
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P++ YN +V GFC G+ +A ++ ++M +P+ V+ LV GLC +GM
Sbjct: 257 RGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A+ + M KG P+ S +AL+ G+C ++EA V E +++ G AP ++ +++
Sbjct: 317 ARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILIN 376
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDT 446
C M++ +L E+ + DT
Sbjct: 377 GFCKSRRMDEAKSLLAEMYHKALNPDT 403
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 147/299 (49%), Gaps = 3/299 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ VT ++++ LI N D A+ M + P N ++ L + ++
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLC-NEGKIK 175
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF + G PN SYN ++ C G+ S+A +F KM + G PDV +Y ++
Sbjct: 176 EAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTII 235
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ VN A++ L +ML++G P+ +Y +++ C +L EA +L M +
Sbjct: 236 DSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM 295
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD V +V G C+EG +A V E M G PN+ +Y L+ G C Q + + AKK
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++MI +G +P + LI GFC ++DEA +L E+ P T+ ++ +C
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 414
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 3/299 (1%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P + TY +I + L + A++ ML+ P N ++
Sbjct: 218 KMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI-L 276
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A LFK V+P+T + I++ C G +S A +F M E+GV P++ +Y
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTY 336
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM G C + +N A + E M+ +G P SY L+N C+ +++ EA LL M
Sbjct: 337 NALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH 396
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K NPD V Y+T++ G C+ GR +A + ++M S G LPNLV+Y L+ G C G D
Sbjct: 397 KALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 456
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ M K P+ LI+G GK++ A + +L G P T+ +++
Sbjct: 457 ALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 3/333 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
T S F LI A++ F M+ +P N I+ L N A D+
Sbjct: 157 TASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGN-TSMAVDV 215
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
FK ++G P+ +YN ++ + C + ++ A ++M +RG+ P+V +Y ++ G C
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
Q+N A L ++M+ + +PDT++ T L++ LC++ + EA + M KG P+I
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN ++ G+C + +A KV E M GC P + SY L+ G C D AK + M
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
K +P L++G C G+ EA + +E+ G P+ T+ +++ C ++
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455
Query: 429 KLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIG 461
+ ++L + E K + IV I +E I
Sbjct: 456 EALKLLKSM--QEKKLEPNIVHHTILIEGMFIA 486
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 3/320 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ +Y +I ++ A+ F+ M + CKP N I++ L R + A +
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDR-LVNDAME 249
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
G+ PN +YN M+ FC G ++ A LF +M R VMPD + IL+ GLC
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V+ A + E M KG P+ +Y L++ C ++ + EA K+ M +GC P +
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ GFC+ R +A +L +M P+ V+Y TL+ GLC G A + M
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
S G P+ L+ GFC G +DEA +L+ + + P+ +++ + ++
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489
Query: 428 EKLGEVLNEIVKVEIKGDTR 447
E E+ +++ I+ R
Sbjct: 490 EVAKELFSKLFADGIRPTIR 509
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 161/331 (48%), Gaps = 3/331 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++FTY ++ L + A + F+ M+ + P L +++ L + A
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK-EGMVSEA 317
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ + GV PN +YN +M +C ++ A +F M +G P V SY IL+ G
Sbjct: 318 RLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILING 377
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A LL +M +K PDT++Y+TL+ LC+ + +EA + M G P+
Sbjct: 378 FCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPN 437
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y+ ++ GFC+ G +A K+L+ M PN+V + L+ G+ G +VAK+
Sbjct: 438 LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFS 497
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ + G P +IKG G DEA + ++ G P+ ++ +++ +
Sbjct: 498 KLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQ 557
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
+ +++E+V + + + LE
Sbjct: 558 DSSTAIRLIDEMVGKRFSANLSTFQMLLDLE 588
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 158/318 (49%), Gaps = 9/318 (2%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P T +L T L+ + + A F +M E +P N +++ R + A
Sbjct: 296 PDTVTL-TILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQR-LMNEAK 353
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F+ + G P SYNI++ FC + + A +L +M+ + + PD +Y LMQGL
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ + A+++ ++M + G +P+ ++Y+ LL+ C+ L EA KLL M+ K P+I
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNI 473
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
VH+ ++ G G+ A ++ + ++G P + +Y ++ GL +G+ D A +
Sbjct: 474 VHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRK 533
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M GF P+ + +I+GF A +++E++ + + T+ M++ +
Sbjct: 534 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL-------D 586
Query: 427 MEKLGEVLNEIVKVEIKG 444
+E E++++ ++ +G
Sbjct: 587 LESQDEIISQFMRGSSQG 604
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
N I A F +M P V + + +K Q + V L M G + S
Sbjct: 66 NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
L+N LCR + A +L +M G +P +N ++ G C EG+ +A ++ +M
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN++SY T++ GLC G +A + M G P + +I C V+
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A L E+L G P+ T+ +V C ++ + + E+V ++ DT
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDT 298
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 198/431 (45%), Gaps = 41/431 (9%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P +V ++ SQ D A F +A R +RH +S YL+++ L + K IL
Sbjct: 212 NPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRL 271
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + P F +++ Y+ + A+K M + +P N + +LV N
Sbjct: 272 MTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMG-N 330
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L+ A + G+ PN +YN +++ +C + A L ++M +G PD SY
Sbjct: 331 ELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYY 390
Query: 241 ILMQGLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTTLLNSL------------------ 281
+M LCR ++N +L++ M + +PD ++Y +L+ L
Sbjct: 391 TVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEK 450
Query: 282 -----------------CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
C++ K+++A +L+ M KGC+PD+V Y +V+ GFCR G+
Sbjct: 451 LRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQ 510
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+++ M + C PN V+Y T + GLC G A+K M + + ++P+ ++
Sbjct: 511 AKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVH 570
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG----EEMEKLGEVLNEIVKV 440
G GK++EAC V+ E++ G P+ ++V +C E + L E +N+ V
Sbjct: 571 GLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAV 630
Query: 441 EIKGDTRIVEA 451
+ T ++
Sbjct: 631 NVVNFTTVIHG 641
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 43/403 (10%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
D + + A +PN N+ IL++ K + +++ + P++
Sbjct: 299 DAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLI------GIAPNVV 352
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKP-------------LPKQLNRILELL--- 175
TY LIK Y + D+A++ M C P K+LN I EL+
Sbjct: 353 TYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412
Query: 176 ----------VTHRNYLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
VT+ + ++ A ++ + A K + Y+ ++ A+C G
Sbjct: 413 QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGK 472
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A L ++MF +G PDV +Y ++ G CR ++++A +++ M P+ ++YTT
Sbjct: 473 IQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LN LCR K EA K++ + + P+ + Y+ VV G REG+ +AC V+ +M G
Sbjct: 533 FLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKG 592
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PN V LV LC G A + ++ ++KG + + +I GFC ++ A
Sbjct: 593 FFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAAL 652
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+L+++ + P T+ ++ + + +E+ E+ ++++
Sbjct: 653 SLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLR 695
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 164/363 (45%), Gaps = 5/363 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L + + +IL + + V ++ ++ Y + +A + M
Sbjct: 424 TYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEM 483
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P +L+ L A + + +KH PN +Y + C NG
Sbjct: 484 FSKGCDPDVVTYTSVLDGFC-RIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGK 542
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A + N E P+ +Y +++ GL R+ ++N A D++ +M+ KGF P+ +
Sbjct: 543 SLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINL 602
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++SLCR K REA +LL KGC ++V++ TV+ GFC++ A +L+DM
Sbjct: 603 LVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCN 662
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ V+Y L+ L + A + M+ +G P ++I +C G+V++
Sbjct: 663 KHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDL- 721
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
+ ++ + + +++ ++C +E+ +L E+++ + D + + +E
Sbjct: 722 -LKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCH--VLME 778
Query: 457 DYL 459
YL
Sbjct: 779 SYL 781
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 7/293 (2%)
Query: 123 SEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
SE TP+ TY + ++ E L + A R M+ P P ++N ++ L
Sbjct: 553 SEEEWWTPNAITYSVVVHGLRREGKL-NEACDVVREMIGKGFFPNPVEINLLVHSLCRD- 610
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
R A L K G N ++ ++ FC D+ A +L + M+ PD +Y
Sbjct: 611 GKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTY 670
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ L + ++ A +L ML +G VP ++Y ++++ CRK ++ + KLL +M +
Sbjct: 671 TALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLL 730
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K + YN V+ C+ G +A +L ++ + + L+ + G+
Sbjct: 731 K--SRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMS 788
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
A K M ++ P + + K GK++EA ++ ++ G ++
Sbjct: 789 AYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVSAQE 841
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 162/300 (54%), Gaps = 7/300 (2%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++PS+ F +I Y+++ L D+A + ++ M+ F P P + +L + ++ L+ A
Sbjct: 472 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL-MGLSINGRLQEA 530
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G+ N ++ +++ F GD+ A +L+ +M RG+ PDV ++ + G
Sbjct: 531 TELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDG 590
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L ++ V A ++ +ML KG +P+ +Y +L+ C+ KL EA KL M+ +G PD
Sbjct: 591 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 650
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV--AKKY 363
I N ++ G C++GR A V DM G P++++Y TL+ G C FD+ A
Sbjct: 651 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA--FDMVNADNL 708
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M + G +P + + I GFC+ +++ A +L+EL+ AG P+ T+ ++ +C+
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS 768
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 121/241 (50%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ A C G S A FN M ERG P V ++ ++ C++ V A L
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ + GF P+ + Y TL+N + +++ +A L M+ KG PD + +N +V G +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
GR D ++L+D+ G LP+ + V GLC G D A +++ M+ KG SP
Sbjct: 419 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 478
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+++I + G D+A + ++ G P T ++ + +++ E++ +++
Sbjct: 479 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 538
Query: 439 K 439
+
Sbjct: 539 E 539
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
SLF + + D A++ MLE P N ++ + AF+ +K
Sbjct: 442 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAA-YSQAGLEDKAFEAYK 500
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ P+ + + ++ NG + A L +M E+G+ + ++ +L+ ++
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 560
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
V A L +M +G PD ++++ ++ L ++ + EAY + M KG P+ YN
Sbjct: 561 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 620
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ GFC+ G+ +A K+ + M G LP++ + ++GGLC QG A M
Sbjct: 621 SLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT 680
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G SP + LI G+C + A ++ + +G P T+ + + C+ M +
Sbjct: 681 GLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 740
Query: 431 GEVLNEIVKVEIKGDT 446
+L+E+V I +T
Sbjct: 741 VLMLDELVSAGIVPNT 756
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M +F+C+P N ++ R A F + G P ++N ++ AFC G
Sbjct: 292 MPKFHCEPNAFAYNIVINACCI-RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEG 350
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A LF+ + E G P+ Y LM G + ++++A L E+M KG PD +++
Sbjct: 351 NVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFN 410
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L++ + + + +LL + V G PD ++ V G C GR +A + L DM
Sbjct: 411 ILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEK 470
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P+++++ +++ G+ D A + +LM+ G +P S +L+ G G++ EA
Sbjct: 471 GLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEA 530
Query: 396 CGVLEELLKAG 406
++ ++++ G
Sbjct: 531 TELIGQMIEKG 541
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 6/279 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ + GV P+ I+ + GD + LF + RG P ++ ++
Sbjct: 215 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 274
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CRK ++ LL M P+ +Y ++N+ C + + +A M +GCNP
Sbjct: 275 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 334
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V +NTV+ FC+EG ++A K+ + + G PN + Y TL+ G D A
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-A 423
+ M KG +P + L+ G G+ ++ +L+++ G P + + V +C A
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454
Query: 424 G---EEMEKLGEVLNEIVKVEIKGDTRIVEA--GIGLED 457
G E ME L ++L + + I ++ A GLED
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 493
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 153/389 (39%), Gaps = 75/389 (19%)
Query: 130 PSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+ F Y I I A D AL F M+E C P N ++ N + A
Sbjct: 299 PNAFAYNIVINACCIRGRTSD-ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVE-AR 356
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG- 245
LF + G PN YN +M + +I A L+ +M ++G+ PD ++ IL+ G
Sbjct: 357 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416
Query: 246 ----------------------------------LCRKSQVNRAVDLLEDMLNKGFVPDT 271
LC +++ A++ L DML KG P
Sbjct: 417 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 476
Query: 272 LSY-----------------------------------TTLLNSLCRKKKLREAYKLLCR 296
+++ ++LL L +L+EA +L+ +
Sbjct: 477 IAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQ 536
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M KG + + + + ++ F + G + A + +M G P++V++ + GL QG+
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 596
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A M+ KG P+ ++LI GFC GK++EA + + + G P T M
Sbjct: 597 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 656
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
I+ +C M V ++ + + D
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLSPD 685
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 38/217 (17%)
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ + + A+++F + G++PN +YN ++ FC G ++ A L M RG++PD
Sbjct: 591 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 650
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ + +++ GLC++ ++ A+++ DM G PD ++Y TL+N C+ + A L+
Sbjct: 651 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 710
Query: 296 RMKVKGCNPDI-----------------------------------VHYNTVVLGFCREG 320
RM G NPD+ V YN+++ G C +
Sbjct: 711 RMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD- 769
Query: 321 RAIDACKVL-EDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+D +L + +PN+V+ L+ QGM
Sbjct: 770 -ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGM 805
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM+ +A+++L M G P L L R +KL + +G
Sbjct: 202 LMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRG 261
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P ++ ++LGFCR+G +L MP C PN +Y ++ C +G A
Sbjct: 262 PQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDAL 321
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ LMI +G +P + +I FC G V EA + + L + G +P+ + ++
Sbjct: 322 AWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGY 381
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
E+++ + E+ K I D
Sbjct: 382 VKMREIDQANMLYEEMRKKGIAPD 405
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 173/346 (50%), Gaps = 4/346 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP R+ KL+ ++ PL A +FD A R+P F S++ + ++ ++ A L+
Sbjct: 9 SPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVA-ADPGLLLAHAPRI 67
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+ + H P + L+K YA++ +P+ AL F++M F C P + N +L V
Sbjct: 68 IAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESH 127
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ R A + FK V PN ++YN++M+ C G+ L M+ G+ PD +Y
Sbjct: 128 QWAR-AENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITY 186
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR-MK 298
L+ G+ + + A+++ ++M +G PD + Y +++ ++ +A ++ R ++
Sbjct: 187 GTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLR 246
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ P +V YN ++ G C+ GR + ++ E M N +L +Y L+ GL + G
Sbjct: 247 EELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLG 306
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
A+K + M+ +G P +A++ G C G V+E + EE+ K
Sbjct: 307 GARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGK 352
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 12/361 (3%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D + A E+++ R+ S +Y ++I L + FS +I +K
Sbjct: 231 RGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC--D 288
Query: 132 LFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
LFTY I+ S D A K + M+ +P N +L L N + F+L+
Sbjct: 289 LFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGN-VEECFELW 347
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ K L N +SYNI ++ NG + A L++ + E D +Y +++ GLC
Sbjct: 348 EEMGKCS-LRNVRSYNIFLKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWN 402
Query: 250 SQVNRAVDLLEDMLNK--GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
VNRA+ +LE+ ++ G D +Y++L+N+LC++ +L EA ++ M +GC +
Sbjct: 403 GYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSH 462
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
N ++ GF + + A KV +M GC +VSY L+ GL F A + M
Sbjct: 463 VCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEM 522
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ KG+ P LI G +D A + + L G P + +++ ++C+ ++
Sbjct: 523 LEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKV 582
Query: 428 E 428
E
Sbjct: 583 E 583
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+K G N+ N+++ F + + A +F +M +G V SY IL+ GL R +
Sbjct: 453 NKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERF 512
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A D + +ML KG+ PD ++Y+TL+ L + A +L + G PDI+ YN V
Sbjct: 513 REAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIV 572
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ C G+ DA ++ + C+ NLV++ T++ G G ++A K ++
Sbjct: 573 IHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDEL 631
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
P + +KG C+ G+V +A G L++ L G P TW ++V +
Sbjct: 632 QPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 164/398 (41%), Gaps = 40/398 (10%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKI 139
F+ A PN TY +L+ + + F +L + ++P TY LI
Sbjct: 139 FEAARVSPNVE----TYNVLMKVMCKKGEFEKGRGLLTWMWGA--GMSPDRITYGTLIGG 192
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
A+S AL+ F M E +P N I++ ++++ + + V P
Sbjct: 193 VAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFP 252
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+ SYN+M+ C G S ++ +M + D+ +Y L+ GL + A +
Sbjct: 253 SVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVY 312
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL-----CRMK--------VKGC---- 302
E+M+ +G PD ++ +LN LC+ + E ++L C ++ +KG
Sbjct: 313 EEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENG 372
Query: 303 -------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMP--SNGCLPNLVSYRTL 347
D Y VV G C G A +VLE+ G + +Y +L
Sbjct: 373 KVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSL 432
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ LC +G D A ++LM +G + V + LI GF K+D A V E+ G
Sbjct: 433 INALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGC 492
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ ++ +++ + E + + +NE+++ K D
Sbjct: 493 SLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPD 530
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 4/292 (1%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
++TY +++ L Y + +L + + F Y LI + D A
Sbjct: 389 SATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGV 448
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M + CK N +++ V H L A +F+ G SYNI++
Sbjct: 449 VELMNKRGCKFNSHVCNVLIDGFVKHSK-LDSAVKVFREMSGKGCSLTVVSYNILINGLL 507
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
AY N+M E+G PD+ +Y L+ GL + ++ A+ L L+ G PD +
Sbjct: 508 RAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDII 567
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y +++ LC K+ +A +L ++ K C ++V +NT++ GF + G A K+ +
Sbjct: 568 MYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHI 626
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+ P+++SY + GLC G A ++ + +GF P + L++
Sbjct: 627 LEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVR 678
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
+Y ILI L RA+ F D + + + + P + TY LI ESN+ D AL+ +
Sbjct: 498 SYNILINGLLRAERFREAYDCVNEMLEKGWK--PDIITYSTLIGGLYESNMMDAALRLWH 555
Query: 155 SMLEFNCKPLPKQLNRILELLVTHR----NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
L+ KP + I+ +V HR + A L+ + + + N ++N +M
Sbjct: 556 QFLDTGHKP-----DIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEG 609
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
F G+ +A ++ + E + PD+ SY I ++GLC +V AV L+D L +GF+P
Sbjct: 610 FYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPT 669
Query: 271 TLSYTTLLNSL 281
+++ L+ ++
Sbjct: 670 AITWNILVRAV 680
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 324 DACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A V + MP GC P + S+ TL+ + + A+ + + + SP+ + L
Sbjct: 95 EALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVL 154
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+K C G+ ++ G+L + AG +P T+ ++ + ++ EV +E+ + +
Sbjct: 155 MKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGV 214
Query: 443 KGDT 446
+ D
Sbjct: 215 EPDV 218
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 156/304 (51%), Gaps = 11/304 (3%)
Query: 148 RALKTFRSMLE----FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
R L++ R +LE CKP N ++ L + + A LF S + G P +
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG-VSEALKLFGSVLRQGYEPEVPT 295
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YNI++ ++ A+ LF+ + + G+ PD +Y + + GLC+ +V A+ +L+DM
Sbjct: 296 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
KG VPD +S+ ++N LC++K++ EA LL M+ KGC+P+ + +NT++ G CR G+
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLC---DQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A ++M G P +V+Y LV GLC +G A MI KG P
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 475
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
ALI G GK+D+A +L + G P+ T+ ++ +C ++K+ E L V +
Sbjct: 476 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG---LDKVDEALELFVAM 532
Query: 441 EIKG 444
KG
Sbjct: 533 VEKG 536
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 137/253 (54%), Gaps = 4/253 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F KHG PN +YN ++ C G +S A L+ +M + G PDV +Y L+ G C
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +++ A+ + + + +GFVPD ++Y L+N C+ KL EA ++L RM + PD+V
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ-GMFDVAKKYMQL 366
YN++V G C+ GR +A ++ D G PN+++Y TL+ GLC + + A++ ++
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEK 248
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ G P +ALI G V EA + +L+ G P T+ +++ + +
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308
Query: 427 MEKLGEVLNEIVK 439
+ + E+ + +VK
Sbjct: 309 VNEAFELFSGLVK 321
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 140/280 (50%), Gaps = 6/280 (2%)
Query: 126 YPVTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + P TY + I ++ + AL + M E C P N ++ L + +
Sbjct: 322 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR-VD 380
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L G PN S+N ++ C G A T F +M +RGV P V +Y IL+
Sbjct: 381 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 440
Query: 244 QGLCRKSQVNR---AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
GLC+ Q R A+ L + M+ KG VPD ++Y+ L++ L + KL +A +LL M+ K
Sbjct: 441 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC P++ YN+++ G C + +A ++ M GC+P+ ++Y T++ LC Q M D A
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKA 560
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ G P + +LI G C V +VDEA +L+
Sbjct: 561 LALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 168/361 (46%), Gaps = 18/361 (4%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
C+V KL A +IFD A ++ F TY LI +A IL +
Sbjct: 131 CKVGKLDE-------ALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 123 SEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
SE + P + TY L+ ++ D A +++ P + ++ L
Sbjct: 183 SE--SLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELR 237
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A L + +G P+ SYN ++ +S A LF + +G P+V +Y
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ GL ++ +VN A +L ++ G PD ++YT ++ LC+ ++ +A +L M K
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PD+V +N V+ G C+E R +A +L M + GC PN +S+ TL+ G C G + A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNV---GKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ M+ +G P + L+ G C G++ EA + + +++ G P T+ +
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477
Query: 418 V 418
+
Sbjct: 478 I 478
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 151/334 (45%), Gaps = 41/334 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + +Y LI A ALK F S+L +P N +++ L+ + + AF+
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE-DRVNEAFE 314
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF KHG+ P+ +Y + + C G + A + M E+G +PDV S+ ++ GLC
Sbjct: 315 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 374
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V+ A LL M KG P+ +S+ TL+ CR K ++A M +G P +V
Sbjct: 375 KEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV 434
Query: 308 HYNTVVLGFCR---EGR---AI--------------------------------DACKVL 329
YN +V G C+ EGR AI DA ++L
Sbjct: 435 TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL 494
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M + GC+PN+ +Y +L+ GLC D A + M+ KG P +I C
Sbjct: 495 GAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQ 554
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
VD+A + + L+AG P + ++ +CA
Sbjct: 555 EMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCA 588
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 46/420 (10%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
IS I CR ++ +Q+ +FD R+ F + TY L+ L
Sbjct: 49 DISTFNIYISGLCRASRIGDAQT-------VFD-GMRKHGFWPNRITYNALLSGLCNGGR 100
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
S + + Y +P + TY L+ + + D ALK F ++ P
Sbjct: 101 MSDAQALYERMIKAGY--SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTY 158
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS---------- 218
N ++ + L A + + ++P+ +YN ++ C NG +
Sbjct: 159 NALINGF-CKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG 217
Query: 219 -----IAYT------------------LFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
I Y+ L KM G PD+ SY L+ GL R+ V+ A
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L +L +G+ P+ +Y L++ L ++ ++ EA++L + G PD + Y + G
Sbjct: 278 LKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ GR DA +L+DM GC+P++VS+ ++ GLC + D A+ + M +KG SP+
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G C GK +A +E+LK G P T+ ++V +C + ++ E +
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ + I++R+ +G I A+ ++ +G + D+ ++ I + GLCR S++ A +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTV 72
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ M GF P+ ++Y LL+ LC ++ +A L RM G +PD+V YNT++ GFC+
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G+ +A K+ + G +P++V+Y L+ G C D A++ +Q M+S+ P
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++L+ G C G+VDEA + ++ G +P+ T+ ++ +C
Sbjct: 193 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLC 233
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 119/213 (55%), Gaps = 4/213 (1%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
L + ++NI + C I A T+F+ M + G P+ +Y L+ GLC +++ A
Sbjct: 47 LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQA 106
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E M+ G+ PD ++Y TLL+ C+ KL EA K+ +G PD+V YN ++ GFC
Sbjct: 107 LYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFC 166
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ + +A ++L+ M S +P++V+Y +LV GLC G D A+ L++ KGFSP+
Sbjct: 167 KADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVI 223
Query: 378 VSHALIKGFC-NVGKVDEACGVLEELLKAGEAP 409
LI G C + +++ A +LE+++ G P
Sbjct: 224 TYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 39/298 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +F A K G +P+ +YN ++ FC + A + +M ++PDV +Y
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK-KKLREAYKLLCRMKVK 300
L+ GLC+ +V+ A L+ D KGF P+ ++Y+TL++ LCR+ ++L A +LL +M +
Sbjct: 196 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 301 GCNPDIVHYNTVVLGFCRE-----------------------------------GRAIDA 325
GC PDIV YN ++ G RE R +A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ + +G P+ ++Y + GLC G + A ++ M KG P +A+I G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C +VDEA +L + G +P+ ++ ++ C + +K E++K +K
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 430
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
D L + + PD + LL SL + K+ +A++ + ++ VKG DI +N + G CR
Sbjct: 6 DKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRAS 64
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R DA V + M +G PN ++Y L+ GLC+ G A+ + MI G+SP +
Sbjct: 65 RIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN 124
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+ GFC VGK+DEA + + +K G P T+ ++ C +++++ +L +V
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 182/378 (48%), Gaps = 5/378 (1%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P +V ++ SQ D +A + F +A RQ +RH Y ++ L + K +L+ +
Sbjct: 174 PSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLM 233
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
K TP F+ ++ Y+ + ALK M +P N +++ V N
Sbjct: 234 KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV-RANR 292
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G++PN +YN M+R +C + A L M +G +PD SY
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+M LC++ ++ DL++ M + G VPD ++Y TL++ L + EA L + K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G D + Y+ +V C+EGR +A ++ +M C P++V+Y +V G C G D A
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKA 469
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
KK +Q+M + G P+ AL+ G C GK EA ++ + +P+ T+ +I+
Sbjct: 470 KKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHG 529
Query: 421 ICAGEEMEKLGEVLNEIV 438
+ ++ + +V+ E+V
Sbjct: 530 LRREGKLSEACDVVREMV 547
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + H HG PNT SY ++ C G A + N E P+ +Y ++M
Sbjct: 469 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 528
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL R+ +++ A D++ +M+ KGF P + LL SLCR + EA K + KGC
Sbjct: 529 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 588
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V++ TV+ GFC+ A VL+DM ++ +Y TLV L +G A + M
Sbjct: 589 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 648
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG P +I +C +GKVD+ +LE+++ + + ++ ++C
Sbjct: 649 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVL 706
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEA 451
++E+ +L ++++ + D + A
Sbjct: 707 GKLEEADTLLGKVLRTASRSDAKTCYA 733
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 6/241 (2%)
Query: 164 LPKQL--NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
+P Q+ N ++ +L H ++ A K A + G + Y+ ++ A C G +S A
Sbjct: 380 VPDQVTYNTLIHMLTKH-DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L N+M PDV +Y ++ G CR +V++A LL+ M G P+T+SYT LLN +
Sbjct: 439 DLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 495
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
CR K EA +++ + +P+ + Y+ ++ G REG+ +AC V+ +M G P
Sbjct: 496 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 555
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V L+ LC G A+K+M+ ++KG + + +I GFC ++D A VL++
Sbjct: 556 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 615
Query: 402 L 402
+
Sbjct: 616 M 616
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR Y ++ L + S D++ + VT +T ++ +
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVT---YTAVVNGFCRLGE 465
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D+A K + M KP +L + L A ++ + +H PN+ +Y+
Sbjct: 466 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE-AREMMNMSEEHWWSPNSITYS 524
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++M G +S A + +M +G P +L+Q LCR + + A +E+ LNK
Sbjct: 525 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 584
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G + +++TT+++ C+ +L A +L M + + D+ Y T+V ++GR +A
Sbjct: 585 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 644
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++++ M G P V+YRT++ C G D ++ MIS+ ++ + +I+
Sbjct: 645 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEK 702
Query: 386 FCNVGKVDEACGVLEELLKAG 406
C +GK++EA +L ++L+
Sbjct: 703 LCVLGKLEEADTLLGKVLRTA 723
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 33/258 (12%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A D+ + G P N+++++ C +G A + +G +V ++
Sbjct: 536 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 595
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C+ +++ A+ +L+DM D +YTTL+++L +K ++ EA +L+ +M KG
Sbjct: 596 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 655
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG--------------CLPNLVSYRTL 347
+P V Y TV+ +C+ G+ D +LE M S L L TL
Sbjct: 656 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTL 715
Query: 348 VG-------------------GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+G G +G+ A K M ++ P + L K
Sbjct: 716 LGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVL 775
Query: 389 VGKVDEACGVLEELLKAG 406
GKVDEA ++ L++ G
Sbjct: 776 KGKVDEADKLMLRLVERG 793
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 88/170 (51%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + Y ++L L + K + + ++L MK +G ++ V++ + R G+ DA KVL
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M G PNL+ T + + A ++++ M G P+ + +I+G+C++
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+V+EA +LE++ G P + ++ I+ +C + + ++ +++ ++ K
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 75/200 (37%), Gaps = 25/200 (12%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
S++DD+ + K +FTY L+ + A + + ML P P
Sbjct: 610 LSVLDDMYLINKH------ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP--- 660
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS-------YNIMMRAFCFNGDISIAY 221
VT+R + + K +L S YN ++ C G + A
Sbjct: 661 -------VTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEAD 713
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
TL K+ D ++ LM+G +K A + M N+ +PD L L
Sbjct: 714 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRL 773
Query: 282 CRKKKLREAYKLLCRMKVKG 301
K K+ EA KL+ R+ +G
Sbjct: 774 VLKGKVDEADKLMLRLVERG 793
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT +I + +++ D AL M N +++ L + + A +L K
Sbjct: 593 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL-GKKGRIAEATELMKKM 651
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P +Y ++ +C G + + KM R + Y +++ LC ++
Sbjct: 652 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKL 709
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
A LL +L D + L+ +K AYK+ CRM + PD+
Sbjct: 710 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDV 763
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 1/357 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L A+ + + D++ + + P F+ LI + L +R + M
Sbjct: 219 SYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQM 278
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C P + I++ V L A + +G+ PN YN +++ C
Sbjct: 279 AEHGCAPDVRMYATIIDG-VCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +MF++ D ++ IL+ LC+ V+R +++LE ML G +PD ++YTT
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N C++ + EA LL M GC P+ V Y V+ G C R +DA +++ M G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C PN V++ TL+ LC +G+ + A + ++ M+ G SP +I G G DEA
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+L ++K G +P+ + I + + K+ ++ I ++ D + A I
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVI 574
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 39/351 (11%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +TY L++ AL M C P P + LE + R
Sbjct: 106 PVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGF-RG 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILM 243
A + + H G + + N++++A C G + A L + G PDV SY ++
Sbjct: 165 AVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL 224
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC + DL+E+M+ G P+ ++++TL+ LCR +++ +M GC
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD---------- 353
PD+ Y T++ G C+E R A +L MPS G PN+V Y TL+ GLC
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 354 -------------------------QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
G+ D + ++ M+ G P +I GFC
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L + G P+ ++ +++ +C+ E E+++++++
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ 455
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 153/323 (47%), Gaps = 3/323 (0%)
Query: 86 SRQPNFRHSNST--YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAES 143
+R P++ S + Y L+ L A + + +L + + P+ F L+ ++
Sbjct: 311 NRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQN 370
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
L DR ++ MLE C P ++ + A L +S G PNT S
Sbjct: 371 GLVDRVIEVLEQMLEHGCMPDVITYTTVINGF-CKEGLIDEAVMLLRSMAACGCRPNTVS 429
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y I+++ C A L ++M ++G P+ ++ L+ LC+K V +A++LL+ ML
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G PD +SY+T+++ L + EA +LL M KG +P+ + Y+++ EGR
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++ E++ + V Y ++ LC +G D A +++ M+S G P+ S LI
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609
Query: 384 KGFCNVGKVDEACGVLEELLKAG 406
+G + G V EA +L EL G
Sbjct: 610 RGLASEGFVKEAQEILTELCSKG 632
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YN M+ +C G ++ A L + V P+ +Y L++ LC + ++ A+ +L+DM
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+G P Y L + CR R A +L + +GC D+ + N V+ C +G
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 324 DACKVLED-MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A ++L D +PS GC P++VSY ++ GLC + + M+ M++ G P+ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I C G + V ++ + G AP + I+ +C E +E +LN +
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRM 313
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 41/266 (15%)
Query: 112 SLIDDILITLKS--EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
L+D ++ L+ EH P + TY +I + + L D A+ RSM C+P
Sbjct: 371 GLVDRVIEVLEQMLEH-GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+L+ L + ++ A +L + G PN ++N ++ C G + A L +M
Sbjct: 430 YTIVLKGLCSAERWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 488
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL---------- 277
G PD+ SY ++ GL + + A++LL M+ KG P+T+ Y+++
Sbjct: 489 LVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRI 548
Query: 278 -------------------------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++SLC++ + A + L M GC P+ Y +
Sbjct: 549 NKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTIL 608
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCL 338
+ G EG +A ++L ++ S G L
Sbjct: 609 IRGLASEGFVKEAQEILTELCSKGAL 634
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G CR Q+ A L + P+ +Y L+ +LC + ++ +A +L M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+GC P Y+ + CR A VL D+ GC ++ + ++ +CDQG D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 359 VAKKYMQ-LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + ++ L+ S G P +A+++G C + ++EE++ AG P+ T+ +
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +C E++ EV ++ + D R+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRM 289
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 170/344 (49%), Gaps = 6/344 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI RAK +L ++ P P+L TY L+ + ++ A +
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCP--PNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E P N +++ R + A L G+ PN +Y+ ++ C +
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFC-KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
A + +M GV PD +Y L+ GLC+ ++ A +L M G PD + Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
++++++ C+ KL EA K L M+ + +PD+V YNTV+ G C+ G+ +A +L+ M
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Query: 335 NG-CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+G LP++V+Y T++ GLC M A+K + M G +P +I G C G+++
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
EA +L+ + +AG AP+ T+ ++ +C ++++ V+ E+
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 165/327 (50%), Gaps = 9/327 (2%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
++L +KS + P FT+ +I A + D A+ RSM C P ++
Sbjct: 11 ELLEEMKSAGF--APDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIA 65
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
+ L A L + + G PN +YN+++ A C + A + KM E G
Sbjct: 66 AFARAKK-LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 124
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P+V ++ L+ G C++ V+ A LL M+ KG P+ ++Y+ L++ LC+ +K EA ++
Sbjct: 125 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L MK G PD Y+ ++ G C+ + +A ++L M +GC P++V Y +++ C
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA-PHED 412
G A+K +Q M + SP + +I G C +GK+ EA +L+++ ++G+ P
Sbjct: 245 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV 304
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVK 439
T+ ++ +C + + + ++L+ + K
Sbjct: 305 TYSTVINGLCKSDMLVEAQKLLDRMCK 331
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 159/318 (50%), Gaps = 8/318 (2%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPD 147
R + TY LI L +++ F ++L +K+ VTP FTY LI +++ +
Sbjct: 157 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG--VTPDAFTYSALIHGLCKADKIE 214
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A + R M C P + I+ L A + K P+ +YN +
Sbjct: 215 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE-AQKTLQEMRKQRKSPDVVTYNTV 273
Query: 208 MRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+ C G I+ A + ++M E G V+PDV +Y ++ GLC+ + A LL+ M G
Sbjct: 274 IDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 333
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++YTT+++ LC+ +L EA LL MK GC P++V Y T++ G C+ + +A
Sbjct: 334 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 393
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS--KGFSPHFSVSHALIK 384
+V+E+M + GC PNLV+Y T+V GLC G A++ +Q M SP + ++
Sbjct: 394 RVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVN 453
Query: 385 GFCNVGKVDEACGVLEEL 402
+ V EA +LE++
Sbjct: 454 ALMSSDLVQEAEQLLEQM 471
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C GD+ A L +M G PD ++ ++ + ++ A+D L M G P+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++YT L+ + R KKL EA KLL M+ +GC P++V YN +V C+ A V++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G PN++++ +LV G C +G D A+K + +M++KG P+ ALI G C K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
EA VLEE+ +G P T+ ++ +C +++E+ ++L
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQML 220
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ A++LLE+M + GF PD ++T ++ ++ L A L M GC+P++
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ F R + +A K+LE+M GC PNLV+Y LV LC M A+ ++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
MI GF+P+ ++L+ GFC G VD+A +L ++ G P+ T+ ++ +C ++
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 427 MEKLGEVLNEI 437
+ EVL E+
Sbjct: 178 FLEAKEVLEEM 188
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 3/240 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ YN M+ +C G + A L M V PD +Y L++GLC + + + A+ +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
LEDM +G +PD ++YT LL + C++ ++A KLL M KGC PDIV YN V+ G C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EGR DA + L+++PS GC PN VSY ++ GL ++ A+K M+ M KG P+
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI C G V+ A VLE++ + G P+ ++ ++ C +++ K E + +V
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 6/320 (1%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY LI+ AL M C P +LE Y +
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGY-KQ 219
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L H G P+ +YN+++ C G + A + G P+ SY I+++
Sbjct: 220 AMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK 279
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL + A L+E+M +KG P+ +++ L++ LCR+ + A ++L +M GC P
Sbjct: 280 GLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP 339
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN ++ FC++ + A + +E M S GC P++VSY TL+ LC G DVA + +
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELL 399
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ KG SP + +I G GK EA +L+E+ G P T+ I +C
Sbjct: 400 HQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRE 459
Query: 425 EEMEKLGEVLNEIVKVEIKG 444
+ +E E + KV+ G
Sbjct: 460 DRIE---EAVRTFCKVQDMG 476
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 160/293 (54%), Gaps = 5/293 (1%)
Query: 129 TPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
P + TY L I E + D A++ +++ + C+P N +L+ L T +
Sbjct: 233 APDIVTYNVVLNGICQEGRVED-AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + AHK G PN ++N+++ C G + A + +M + G P+ SY L+
Sbjct: 292 KLMEEMAHK-GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHA 350
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ ++++A++ +E M+++G PD +SY TLL +LCR ++ A +LL ++K KGC+P
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ YNTV+ G + G+ +A ++L++M S G P++++Y T+ GLC + + A +
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFC 470
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G P ++ +A++ G C + A + ++ +G P+E T+ ++V
Sbjct: 471 KVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 150/284 (52%), Gaps = 3/284 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + + G LP+ +Y I++ A C A L ++M ++G PD+ +Y +++
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+C++ +V A++ L+++ + G P+T+SY +L L ++ +A KL+ M KGC P
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +N ++ CR G A +VLE MP GC PN +SY L+ C Q A +++
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+LM+S+G P + L+ C G+VD A +L +L G +P ++ ++ +
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424
Query: 425 EEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLEDYLIGKTRS 465
+ ++ E+L+E+ ++ D + +G+ ED + R+
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRT 468
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 3/299 (1%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I + A +A+K M + C P N +L + + A +
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG-ICQEGRVEDAME 257
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
K+ +G PNT SYNI+++ A L +M +G P+V ++ +L+ LC
Sbjct: 258 FLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLC 317
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R+ V A+++LE M G P++LSY LL++ C++KK+ +A + + M +GC PDIV
Sbjct: 318 RRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIV 377
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ CR G A ++L + GC P L+SY T++ GL G A + + M
Sbjct: 378 SYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 437
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
SKG P + G C +++EA ++ G P + I+ +C E
Sbjct: 438 TSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE 496
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 4/296 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
++D + LK+ Y P+ +Y ++K + + A K M C P N
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L R + PA ++ + ++G PN+ SYN ++ AFC I A M R
Sbjct: 312 LISFLC-RRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ A++LL + +KG P +SY T+++ L + K +EA
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CRE R +A + + G P Y ++ G
Sbjct: 431 LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
LC + A MIS G P+ S L++G G V EA + +L G
Sbjct: 491 LCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 43/229 (18%)
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSY----TTLLNSLCRKKKLREAYKLLCRMKVKG 301
L R+ +++ A+ L++ + G P + + L+ LC + +A ++L
Sbjct: 77 LVRRGELDDALRLVDSL--AGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AA 129
Query: 302 CNPDIVHYNTVVLGF--------------------------------CREGRAIDACKVL 329
PD++ YN +V G+ C GR +A VL
Sbjct: 130 SGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
EDM GCLP++V+Y L+ C + + A K + M KG +P + ++ G C
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G+V++A L+ L G P+ ++ +++ + E E +++ E+
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A F G+ P YN ++ C + A LF M G MP+ +Y IL++
Sbjct: 465 AVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVE 524
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFV 268
GL + V A +L + ++G V
Sbjct: 525 GLAYEGLVKEARELFAQLCSRGVV 548
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 3/313 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +TY LI E AL ML C P N +LE R Y R
Sbjct: 162 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGY-RQ 220
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L G PN +YN++M C GD+ A L + G P +Y +++
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A +L+ +ML + P+ ++ ++ SLCRK L++A +LL +M GC
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+IV YN ++ G C + A +L M S GC P++V+Y TL+ GLC + A++ M
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P + LI C G + +A V +++ G P+ T+ I+ +
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 460
Query: 425 EEMEKLGEVLNEI 437
++++ E+ NE+
Sbjct: 461 TKLDQALELFNEM 473
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 154/308 (50%), Gaps = 5/308 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L L++ + PS Y ++K + A + ML NC P N
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + L+ A L + KHG N +YN ++ C ++ A L +KM
Sbjct: 313 VIYSLC-RKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y L++GLC +Q A +L+++M G +PD +++ TL+ LC+K + +A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ +M KGC P+ + Y+T++ G + + A ++ +M G P+ + Y+ L
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAEC 490
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
L D + A + ++ + G SPH + +A++ G C GK + A ++ ++ +G P
Sbjct: 491 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 550
Query: 411 EDTWVMIV 418
+ T+V+++
Sbjct: 551 DLTYVILI 558
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V PN +YN ++ C G + A ++ + M RG PDV +Y IL++ C+ +A+
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L++ M +G P+ ++Y L++ +C + + +A +LL + GC P V+YNTV+ G
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R DA +++ +M C PN ++ ++ LC +G+ A + ++ M G + +
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+A+I G C VD A G+L ++ G P T+ ++ +C+ + E+++
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402
Query: 437 IVK 439
+ +
Sbjct: 403 MTQ 405
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 129/243 (53%), Gaps = 3/243 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y + +C G + A + M V P+ +Y L+ LC + QV A+ +L+DM
Sbjct: 137 AYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDM 193
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L +G PD ++Y LL + C+ + R+A +L+ M+ +GC P+ V YN ++ G C EG
Sbjct: 194 LCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDV 253
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA ++L ++PS+GC P+ V+Y T++ GLC + A + + M+ + P+ + + +
Sbjct: 254 DDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVV 313
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I C G + +A +LE++ K G + T+ I+ +C ++ +L+++
Sbjct: 314 IYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 373
Query: 443 KGD 445
K D
Sbjct: 374 KPD 376
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPD 147
N + +T+ ++I L R L I + K + T ++ TY +I E D
Sbjct: 302 NCPPNEATFNVVIYSLCRKGL--LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVD 359
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+ M + CKP N +L+ L + ++ A +L + ++G LP+ ++N +
Sbjct: 360 GAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVD-AEELMDNMTQNGCLPDNVTFNTL 418
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C G + A +F +M ++G P+ +Y ++ GL + +++++A++L +M +KGF
Sbjct: 419 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 478
Query: 268 VPD----------------------------------TLSYTTLLNSLCRKKKLREAYKL 293
PD T+ Y +L LCR K A +
Sbjct: 479 NPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDI 538
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
+ M GC PD + Y ++ G EG +A ++L + S L N
Sbjct: 539 MAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVN 585
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 39/205 (19%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP--DIVHYNTVVLGFCREGR----- 321
PD L+ LCR+ + +A ++ V C P +V Y + G+CR GR
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERV-----VGACGPAATVVAYGALTDGYCRAGRLGDAR 155
Query: 322 ---------------------------AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
DA VL+DM GC P++V+Y L+ C
Sbjct: 156 RVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKG 215
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ A + + LM ++G +P+ + L+ G C G VD+A +L L G P +
Sbjct: 216 RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNY 275
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVK 439
++ +C+ E E++ E+++
Sbjct: 276 NTVLKGLCSAERWGDADELVTEMLR 300
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 113 LIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE--FNCKPLPKQL 168
++D I + + TP+ TY +I A++ D+AL+ F M FN P ++
Sbjct: 428 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN----PDKI 483
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
++L + + + A + G+ P+T YN ++ C NG A + M
Sbjct: 484 YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMV 543
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G MPD +Y IL++GL + +N A +LL + ++ + ++L
Sbjct: 544 SSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSL 587
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 1/357 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L AK + + D++ + P F LI + L +R + M
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ C P + +L+ V +L A ++ +G+ PN YN +++ C
Sbjct: 287 VDHGCTPDIRMYATVLDG-VCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +MF+ D ++ IL+ C+ V R ++LLE ML G VPD ++YTT
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N C++ + EA LL M GC P+ + Y V+ G C R +DA ++ M G
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C PN V++ T++ LC +G+ + A + ++ M+ G SP +I G GK DEA
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+L ++ G +P+ + I + + ++ ++ + I V I+ D + A I
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVI 582
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 43/355 (12%)
Query: 127 PVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY-- 181
PV P+ +TY + + A + D AL M C P+P + ILE +
Sbjct: 110 PVPPNAYTYFPVVRALCARGRIAD-ALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC-FNGDISIAYTLFNKM-FERGVMPDVESY 239
R A + + H G + + N+++ A C G + A L + G PDV SY
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+++GLC + R DL+E+M+ G P+ +++ TL+ LCR +++L +M
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC PDI Y TV+ G C+EG A ++L+ MPS G PN+V Y T++ GLC ++
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348
Query: 360 AKKYM-----------------------------------QLMISKGFSPHFSVSHALIK 384
A++ + + M+ G P +I
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
GFC G +DEA +L+ + G P+ ++ +++ +C+ E ++++++++
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIE 463
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 160/332 (48%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI D R P++ + + Y ++ L A+ + +++L + P+ F
Sbjct: 313 VAHEILD---RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L R ++ MLE C P ++ + A L KS
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF-CKEGLIDEAVMLLKSMAA 428
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C A L ++M E+G P+ ++ ++ LC+K V +
Sbjct: 429 CGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+EGR ++ +++ + V Y ++ LC +G D A +++ M+S G P
Sbjct: 549 ALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMP 608
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LI+G + G V EA +L EL G
Sbjct: 609 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YN M+ +C G ++ A L + V P+ +Y +++ LC + ++ A+ +L++M
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 264 NKGFVPDTLSYTTLLNSLCRKKK---LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+G P Y +L + C + R A ++L + +GC D+ + N V+ C +G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 321 RAID-ACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
++D A ++L D+P++ GC P++VSY ++ GLC + + M+ M+ G P+
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ LI C G + VL +++ G P + ++ +C +E E+L+ +
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 177/374 (47%), Gaps = 42/374 (11%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L + +D+A+ P F+H+ FS F
Sbjct: 93 LGTQFYDWAAALPGFKHT---------------IFS--------------------FNKY 117
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ + +S P +A+ FRS L C+P + +L + F+
Sbjct: 118 LNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRS-- 175
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLF-NKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ YNI++++ C G+ + A +F +M GV P + +Y ++ GLC+ +++
Sbjct: 176 SSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG 235
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L E+++ +G PD ++Y TL++SLC+ L EA +L M + C P++V Y+ ++ G
Sbjct: 236 MELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLING 295
Query: 316 FCREGRAIDACKVLEDMPSNGC--LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF- 372
C+ GR +A +++++M C LPN+++Y + + GLC Q M A + M+ +
Sbjct: 296 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 355
Query: 373 -SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP LI G C G++DEAC V ++++ G P+ T+ +V +C ++ME+
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415
Query: 432 EVLNEIVKVEIKGD 445
++ +V + D
Sbjct: 416 AMIESMVDKGVTPD 429
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 35/336 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP + TY L+ + +++ D AL+ M C P N I++ L + A
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC-KSDRSGEA 484
Query: 186 FDLFKS-AHKHGVLPNTKSYNIMMRAF--------------------------CFNG--- 215
F +F A KHG++P+ +Y ++ C NG
Sbjct: 485 FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSK 544
Query: 216 --DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
D+S A ++N+M E ++PD ++ IL+ G C+ +A L E+M+ K PD ++
Sbjct: 545 LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ L++ LC+ ++ A +L M G P++V YN +V G C+ GR +AC+ LE+M
Sbjct: 605 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
S+GC+P+ ++Y +LV LC D A + + + S G+ P + L+ G G+ +
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+A VLEE++ G P T+ ++ +C ++E+
Sbjct: 725 QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEE 760
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 12/309 (3%)
Query: 107 RAKYFSLIDDILITLKSEHYPV------TPSLFTYLIKIYAESNLPD--RALKTFRSMLE 158
+ Y +LID + T ++ P + + I S L D RAL+ + MLE
Sbjct: 501 KITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLE 560
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
P N ++ N+ A LF+ + P+ ++ ++ C G +
Sbjct: 561 LELVPDKVTFNILIAGACKAGNF-EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 619
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A + + M GV P+V +Y L+ GLC+ ++ A LE+M++ G VPD+++Y +L+
Sbjct: 620 AARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLV 679
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+LCR + +A +L+ +K G +PD V YN +V G + G+ A VLE+M G
Sbjct: 680 YALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHH 739
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKY---MQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
P++V+Y TL+ LC G + A++ M +S+ P+ LI G C VG++DEA
Sbjct: 740 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEA 799
Query: 396 CGVLEELLK 404
+++E+++
Sbjct: 800 RELIQEMMR 808
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 35/377 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L + +++ + + V P++ TY + + ++ A + R
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
S+ + + + P + L + + A +F G +PN +YN ++ C
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A+ + M ++GV PDV +Y +L+ C+ S+V+ A++LL M ++G P+ ++
Sbjct: 408 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ ++++ LC+ + EA+++ M +K G PD + Y T++ G R GRA A +L+ M
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527
Query: 333 PS------NGCL-------------------------PNLVSYRTLVGGLCDQGMFDVAK 361
P N C+ P+ V++ L+ G C G F+ A
Sbjct: 528 PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M++K P ALI G C G+V+ A +L+ + G P+ T+ +V +
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647
Query: 422 CAGEEMEKLGEVLNEIV 438
C +E+ + L E+V
Sbjct: 648 CKSGRIEEACQFLEEMV 664
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++P+ ++NI++ C G+ A LF +M + + PDV ++ L+ GLC+ QV A
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 622
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
D+L+ M N G P+ ++Y L++ LC+ ++ EA + L M GC PD + Y ++V
Sbjct: 623 DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYAL 682
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
CR R DA +++ ++ S G P+ V+Y LV GL G + A ++ M+ KG P
Sbjct: 683 CRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDV 742
Query: 377 SVSHALIKGFCNVGKVDEA---CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ LI C G ++EA G + + P+ T+ +++ +C +++ E+
Sbjct: 743 VTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAREL 802
Query: 434 LNEIVK 439
+ E+++
Sbjct: 803 IQEMMR 808
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 164/340 (48%), Gaps = 36/340 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
P++ TY LI + D A + + M+ +C LP + N L+ L ++ + A
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC-KQSMMAEA 836
Query: 186 FDLFKSAHKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
+L +S V P+T +++ ++ C G A +F+ M G +P+V +Y +LM
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ ++ RA ++E M++KG PD ++Y+ L+++ C+ + EA +LL M +GC
Sbjct: 897 NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V +N+++ G C+ ++ +A ++ +DM +G P+ ++Y TL+ GL G A+
Sbjct: 957 PNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEV 1016
Query: 363 YMQLMIS----------KGFSPHFSVSHAL------------------IKGFCNVGKVDE 394
+ M G S VS AL I G C G ++
Sbjct: 1017 LLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQ 1076
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
A + EE++ P T+ ++ +C ++E +++
Sbjct: 1077 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 152/335 (45%), Gaps = 32/335 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L + +++ + + V P++ TY + + ++ A + R
Sbjct: 782 TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
S+ + + + P + L + A ++F G +PN +YN++M C
Sbjct: 842 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A+ + M ++GV PDV +Y +L+ C+ S V+ A++LL M ++G P+ ++
Sbjct: 902 TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ ++++ LC+ + EA+++ M +K G PD + Y T++ G R G A A +L+ M
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Query: 333 PS------NGCL----------------------PNLVSYRTLVGGLCDQGMFDVAKKYM 364
P N C+ P+ V++ L+ G C G F+ A
Sbjct: 1022 PDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALF 1081
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ M++K P ALI G C G+V+ ++
Sbjct: 1082 EEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 28/261 (10%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRILMQGLCRKSQVNR 254
VLPN +YN + C ++ A L + + V PD ++ L+ GLC+ Q +
Sbjct: 813 VLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 872
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A ++ +DM+ G+VP+ ++Y L+N LC+ K+ A+ ++ M KG PD++ Y+ +V
Sbjct: 873 ACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVD 932
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC--DQG-----MFDVAKKYMQLM 367
FC+ +A ++L M S GC PN+V++ +++ GLC DQ MFD +
Sbjct: 933 AFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD------DMT 986
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G +P LI G G +A E LL A P DT+ C +
Sbjct: 987 LKHGLAPDKITYCTLIDGLFRTGWAGQA----EVLLDA--MPDPDTYAF----NCCINGL 1036
Query: 428 EKLGEV---LNEIVKVEIKGD 445
KLG+V L+ ++++E+ D
Sbjct: 1037 SKLGDVSRALHRMLELELVPD 1057
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 170/323 (52%), Gaps = 15/323 (4%)
Query: 121 LKSEHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRIL 172
LK + P++ T L+K +S AL+ ++ML NCKP + I+
Sbjct: 431 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 490
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A +LFK GV+P+ SY ++ FC +G A LFN+M + GV
Sbjct: 491 DGLCKCGRE-DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV ++ +L+ LC++ +V A +LLE M+ +G +P+T++YTTL+ LC ++ EA +
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 609
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC----KVLEDMPSNGC--LPNLVSYRT 346
L +M+ GC PD+V Y T++ G C+ G A K+L D G P+++SY
Sbjct: 610 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 669
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC G D A++ + M + G P+ +LI GFC GK+++A + E++ G
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729
Query: 407 EAPHEDTWVMIVPQICAGEEMEK 429
+ T+ +++ C +++K
Sbjct: 730 VQLNAVTYSVMIHGFCKEGQIDK 752
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 169/360 (46%), Gaps = 50/360 (13%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRILELLVTHRNY 181
P Y L+K ++ + AL+ + ML CKP + I++ L R
Sbjct: 259 PDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 318
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A +LFK G++P+ SY ++ FC +G A LFN+M + G+ PDV + +
Sbjct: 319 -DEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC+K +V A LLE ++ +G +PD ++ TTL+ LC K ++ +A +L +M+ G
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437
Query: 302 CNPDIV-----------------------------------------HYNTVVLGFCREG 320
C P++V Y+ ++ G C+ G
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R +A ++ ++M + G +P+++SY +L+ G C G + AK M+ G P +
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
LI C GKV EA +LE +++ G P+ T+ +V +C + + + ++ ++ K+
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 153/317 (48%), Gaps = 13/317 (4%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK--- 190
T L+K + +A + F M + C P +++ L N ++ A +L K
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN-IKIALELHKNML 469
Query: 191 ---SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
S + PN SY+I++ C G A LF +M GV+PDV SY L+ G C
Sbjct: 470 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 529
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + A L +M++ G PD +++ L++ LC++ K+ EA +LL M +GC P+ V
Sbjct: 530 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 589
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T+V G C R +A ++ M GCLP++V+Y TL+ GLC G A + + M
Sbjct: 590 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 649
Query: 368 ISK------GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+S F P +I G C G+ DEA + +E+ G P+ ++ ++
Sbjct: 650 LSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGF 709
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++E + NE+V
Sbjct: 710 CRSGKLEDAKHLFNEMV 726
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 162/325 (49%), Gaps = 13/325 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY---LRPAFDLF 189
++ LIK + A + F SM + C+P +++ L N L+ ++
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288
Query: 190 KSAHKHGVL--PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++G+ P SY+I++ C + A LF +M +G+MPDV SY L+ G C
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +A L +ML+ G PD + + L++ LC+K K+ EA KLL + +GC PD+V
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
T+V G C + R A ++ M GC+PN+V+ TL+ GLC G +A + + M
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468
Query: 368 ISKGFSPHF------SVSHA-LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+S SP+ ++S++ +I G C G+ DEA + +E+ G P ++ ++
Sbjct: 469 LSD-TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGD 445
C + + + NE+V + ++ D
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPD 552
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 124/241 (51%), Gaps = 9/241 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y LI + S A F M++ +P + ++++L + A
Sbjct: 514 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE-A 572
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + + G +PNT +Y +++ C N IS A LF KM + G +PDV +Y LM+G
Sbjct: 573 NELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKG 632
Query: 246 LCRKSQVNRAVDLLEDMLNK------GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LC+ + A++L + ML+ F PD +SY+ +++ LC+ + EA +L MK
Sbjct: 633 LCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKA 692
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G P+++ Y +++ GFCR G+ DA + +M G N V+Y ++ G C +G D
Sbjct: 693 LGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK 752
Query: 360 A 360
A
Sbjct: 753 A 753
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 11/324 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY---LRPAFDLF 189
++ LIK + A + F SM + C+P +++ L L ++
Sbjct: 48 YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 107
Query: 190 KSAHKHGVL--PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++G+ P SY+I++ C + A LF +M +G+MPDV SY L+ G C
Sbjct: 108 NDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 167
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + +A L +ML+ G D + + L++ LC++ K+ EA +LL M +GC DIV
Sbjct: 168 RSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 227
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ G C + R +A ++ M GC P+ ++Y TL+ GLC G + A + Q M
Sbjct: 228 TYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287
Query: 368 ISKG------FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ P +I G C + DEA + +E+ G P ++ ++
Sbjct: 288 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
C + EK + NE++ V I+ D
Sbjct: 348 CLSGKWEKAKCLFNEMLDVGIQPD 371
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 8/234 (3%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ + +++ FC G + A L M +RG + D+ +Y L++GLC K +++ A
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-------KVKGCNPDIVH 308
L M G PD ++Y TL+ LC+ K+ A L M +K C P +V
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK-CKPTLVS 123
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+ ++ G C++ R +A ++ ++M + G +P+++SY +L+ G C G ++ AK M+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G + S LI C GKV EA +LE +++ G T+ ++ +C
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 14/225 (6%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G+ PDV + +L+ C++ +V A +LLE M+ +G + D ++Y+TL+ LC K +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG------CLPN 340
+ EA +L MK GC PD + Y T++ G C+ G+ A + ++M ++ C P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
LVSY ++ GLC D A++ + M ++G P +LI GFC GK ++A +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL--NEIVKVEIK 443
E+L G T M++ +C K G+V+ NE+++V I+
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILC------KEGKVIEANELLEVMIQ 219
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 41/260 (15%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + + G + + +Y+ +++ C IS A LF M + G PD +Y LM+
Sbjct: 29 ANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 88
Query: 245 GLCRKSQVNRAVDLLEDMLNKG------FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
GLC+ ++N A+ L ++MLN P +SY+ +++ LC+ ++ EA +L MK
Sbjct: 89 GLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMK 148
Query: 299 VKGCNPDIVHYNTVVLGFCR-----------------------------------EGRAI 323
+G PD++ Y +++ GFCR EG+ I
Sbjct: 149 AQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVI 208
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A ++LE M GC+ ++V+Y TL+ GLC + A + M G P L+
Sbjct: 209 EANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLM 268
Query: 384 KGFCNVGKVDEACGVLEELL 403
KG C G ++ A + +E+L
Sbjct: 269 KGLCQTGNINTALQLHQEML 288
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRIL 172
+K + P + TY L+K ++ AL+ + ML N KP + I+
Sbjct: 612 MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 671
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L H A +LFK GV+PN SY ++ FC +G + A LFN+M ++GV
Sbjct: 672 DGLCKHGRE-DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 730
Query: 233 MPDVESYRILMQGLCRKSQVNRAV 256
+ +Y +++ G C++ Q+++A+
Sbjct: 731 QLNAVTYSVMIHGFCKEGQIDKAL 754
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGXKLLKEM 413
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 162/337 (48%), Gaps = 6/337 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F+ I + T +S+ Y +F+ LI Y ES A++ +R E +
Sbjct: 58 FAAIXETXGTQRSDJY-----VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRK 112
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+LE L+ + Y + + ++ + G + +NI+M FC +GDI JA ++F+ + +
Sbjct: 113 VLEHLMKLK-YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKW 171
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V SY LM G R ++ L ML G PD +Y+ L+N LC++ K+ +A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M VKG P+ V + T++ G C+ GR A ++ + M S P+L++Y TL+ G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G A + M KG P LI G C G +D A + +++
Sbjct: 292 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 351
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
E + ++ +C ++L E++ V +K D R
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 388
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M VKG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 230 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMNG 431
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 218/468 (46%), Gaps = 46/468 (9%)
Query: 22 FPPKTPSLIFCYSSSSQESP--------------SSPEQQQESSISNSKSPIG------- 60
F K SL + YSSS+Q P S Q +S+ + G
Sbjct: 20 FTFKRKSLCY-YSSSTQLQPISQTMVQRVCSLVCESYNQHAHMRVSSQRLHFGIEVDFLT 78
Query: 61 --SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKL------------- 105
V +AS + ++ F +A P FRH Y++ + L
Sbjct: 79 HEQAVSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLYIVCAMSLIGNRNSEKACEVM 138
Query: 106 -GRAKYFSLID------DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE 158
+ FS + +++I + ++ ++IK+ +E L + A F M
Sbjct: 139 RCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCV 198
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P R++ ++ + A + G + + ++ +++ F G +
Sbjct: 199 RGVQPDSISY-RVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTT 257
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A F ++ + G+ P++ ++ +++GLC++ + +A ++LE+M+ KG+ P+ ++T+L+
Sbjct: 258 RALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLI 317
Query: 279 NSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ LC+K +A++L ++ + + P+++ Y ++ G+CRE + A +L M G
Sbjct: 318 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 377
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+PN +Y TL+ G C G F+ A M LM S+GFSP+ +A++ G C G+V EA
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYK 437
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+LE+ + G P + T+ +++ + C E + + + N+++K+ I+ D
Sbjct: 438 MLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G++PNT +Y ++ C G+ AY L N M G P++ +Y
Sbjct: 362 LNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNA 421
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC++ +V A +LED G PD +Y L++ C+++ +R+A L +M G
Sbjct: 422 IVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIG 481
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDI Y T++ FCRE R ++ E+ G +P +Y +++ G C +G +A
Sbjct: 482 IQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAM 541
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+ + G +P A+I G C K DEA + + +++ G P E T + + +
Sbjct: 542 KFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEY 601
Query: 422 C 422
C
Sbjct: 602 C 602
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY L+ + + +AL F ML+ +P ++ + N ++ +
Sbjct: 449 PDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC-RENRMKESEM 507
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
F+ A + G++P K+Y M+ +C G++++A F+++ + G PD +Y ++ GLC
Sbjct: 508 FFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLC 567
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++S+ + A L + M+ KG VP ++ TL C+
Sbjct: 568 KQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 13/262 (4%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I CR KL ++++ LL++ ++ + +TY LI +A F D++
Sbjct: 353 ISGYCREDKL--NRAEMLLSR------MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLM 404
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ SE + +P+L TY ++ + A K + KP N ++
Sbjct: 405 NLMSSEGF--SPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHC 462
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
N +R A LF K G+ P+ SY ++ FC + + F + G++P
Sbjct: 463 KQEN-IRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN 521
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
++Y ++ G CR+ + A+ + + G PD+++Y +++ LC++ K EA L
Sbjct: 522 KTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDS 581
Query: 297 MKVKGCNPDIVHYNTVVLGFCR 318
M KG P V T+ +C+
Sbjct: 582 MIEKGLVPCEVTRITLAYEYCK 603
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S++ A +L E+ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAX 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 XYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF +M + G++P+ ++ L+ G C+ +V A+++ + ML++
Sbjct: 211 VLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 XXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 1/312 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E + ++LE L+ + Y + + ++
Sbjct: 68 VFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + G + +NI+M +F G+I +A ++F+ + + G+ P V S+ LM G +
Sbjct: 127 SLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A +L M G P+ V + T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + ++K + + ++ +C
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 432 EVLNEIVKVEIK 443
++L E++ V +K
Sbjct: 367 KMLREMLSVGLK 378
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ E+M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G +A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLD 345
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF+ +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYVPSVVT 418
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S++ A +L ++MLN G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A + ++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T +I L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M +NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+E+ G P + T+ ++ C +E E ++K I+ D
Sbjct: 299 TDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL ++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYVPSVVT 418
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 110/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + + A + M++ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++ +E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 188/405 (46%), Gaps = 28/405 (6%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P Q+ S+ P +P V L A DP A F++ + +P F+H+ +Y +
Sbjct: 49 SRPNWQKHPSL-RKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSM 107
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML---E 158
+ L RA+ + + I I++ + LF L+ FR M E
Sbjct: 108 LNILIRARLLGVAEKIRISMIKSCCSIEDVLFV---------------LEVFRKMNADGE 152
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH----KHGVLPNTKSYNIMMRAFCFN 214
F KP + N IL ++ +L D K+ + + + PN ++N M+ +C
Sbjct: 153 FKFKPTLRCYNTIL---MSLSKFL--LIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKI 207
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A +K+ + G+ PD +Y L+ G CR V+ A ++ M KG + +SY
Sbjct: 208 GNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSY 267
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T L++ LC ++ EA KL M C P + Y ++ GR ++A + +M
Sbjct: 268 TNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKE 327
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC PN+ +Y L+ GLC + D A+K + M KG P +ALI G+C G +D+
Sbjct: 328 KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A +L+ + P+ T+ ++ +C ++ K +LN++++
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 179/362 (49%), Gaps = 3/362 (0%)
Query: 84 YASR--QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
YAS+ Q TY LIL R K ++ + + + +T LI
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
E+ + ALK F M E NC P + ++ L + A +LF + G PN
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVE-ALNLFNEMKEKGCEPNV 334
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+Y +++ C + A + ++M E+G++P V +Y L+ G C++ ++ A ++L+
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + P+T +Y L+ LC+K+K+ +A LL +M + +P ++ YN+++ G C+
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A ++L M NG +P+ +Y + LC +G + A + +KG + + A
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI G+C VGK+D A +LE +L P+ T+ +++ +C ++M++ ++ +++ +
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 442 IK 443
+K
Sbjct: 575 VK 576
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 3/319 (0%)
Query: 130 PSLFTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY + IYA S + AL F M E C+P +++ L N + A
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK-ENKMDEARK 355
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G++P+ +YN ++ +C G I A+ + + M P+ +Y L+ GLC
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K +V++A+ LL ML + P ++Y +L++ C+ L AY+LL M G PD
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ + C+EGR +A + + + + G N V Y L+ G C G DVA ++ M
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
++ P+ + LI+G C K+ EA ++ ++L G P T+ +++ ++
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ +V N +V + + D
Sbjct: 596 DHALKVFNHMVSLGYQPDV 614
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI Y + + D A + M +C P + N ++ L R + A
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK-VHKA 423
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + P+ +YN ++ C D+ AY L + M E G++PD +Y + +
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ +V A L + + KG + + YT L++ C+ K+ AY LL RM C P+
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN ++ G C+E + +A ++ M + G P +V+Y L+G + G FD A K
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G+ P A + + + G ++E V+ ++ + G P T+ +++
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 1/302 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + N D A K M E P N +++ + AF++
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK-EGMIDDAFEILDLM 395
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PNT++YN ++ C + A L NKM ER + P + +Y L+ G C+ + +
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A LL M G VPD +Y+ +++LC++ ++ EA L +K KG + V Y +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C+ G+ A +LE M ++ CLPN +Y L+ GLC + A + M++ G
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P LI G D A V ++ G P T+ + + +E++ +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 433 VL 434
V+
Sbjct: 636 VI 637
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 12/322 (3%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A EI D PN R N L K K +L++ +L ++PSL T
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML------ERKLSPSLIT 441
Query: 135 YLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y I+ + + D A + M E P + ++ L + A LF S
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCK-EGRVEEAGTLFDSV 500
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
GV N Y ++ +C G I +AY+L +M +P+ +Y +L++GLC++ ++
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L+ ML G P ++YT L+ + + A K+ M G PD+ Y
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + +G + V+ M G LP+LV+Y L+ G G+ A +++ M+ G
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680
Query: 373 SPHFSVSHALIKGFCNVGKVDE 394
P + LIK + ++ E
Sbjct: 681 KPSLYIVSILIKNLSHENRMKE 702
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 155/404 (38%), Gaps = 68/404 (16%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
S ++ + K GR + + D ++K++ ++T LI Y + D A
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFD---SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
ML C P N ++E L + ++ A L GV P +Y I++ +G
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKK-MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 216 DISIAYTLFN-----------------------------------KMFERGVMPDVESYR 240
A +FN KM E G++PD+ +Y
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE----------- 289
+L+ G R +RA D L+ M++ G P + L+ +L + +++E
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 290 ------------------AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
A KL +M GC D+ Y ++ GFC++ R +A ++
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G P+ Y +L+ C G++ A + + M+ G P L+ G G
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++A V LL G E W +++ + + +++ E+++
Sbjct: 834 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 877
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 33/312 (10%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY I I + D ALK F M+ +P L + + L
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS-QGMLEEV 633
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ ++ G+LP+ +Y +++ + G A+ M + G P + IL++
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693
Query: 246 LCRK---------------SQVNR--------------AVDLLEDMLNKGFVPDTLSYTT 276
L + S VN A+ L E M+ G D Y
Sbjct: 694 LSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGA 753
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ C++++L EA L+ MK +G +P YN+++ C+ G +A ++++ M NG
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LP L SY+ LV GL +G + AK ++S G++ LI G VDE C
Sbjct: 814 LLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDE-C 872
Query: 397 GVLEELLKAGEA 408
L ++++ +A
Sbjct: 873 SELIDIMEEKDA 884
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 11/270 (4%)
Query: 114 IDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
+DD++ + E + P L TY LI YA L RA + M++ CKP + I
Sbjct: 633 VDDVIAKMNEE--GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP-SLYIVSI 689
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L ++H N ++ +S + N S +I + IA LF KM E G
Sbjct: 690 LIKNLSHENRMKET----RSEIGIDSVSNVNSVDI--ADVWKTLEYEIALKLFEKMVEHG 743
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
DV Y L+ G C++ ++ A L+ M +G P Y +LL+ C+ EA
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 803
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L+ M G P + Y +V G EG A V + S G + V+++ L+ GL
Sbjct: 804 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ + D + + +M K + ++ A
Sbjct: 864 LKRDLVDECSELIDIMEEKDATAQADIACA 893
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 140 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSV 199
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG +P+ +++TTL++ C+ ++ A ++ RM +
Sbjct: 200 LINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQS 259
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C+ G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 260 LLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 319
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 320 KHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEF 379
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 380 CKKGDVWKGSKLLKEM 395
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + +YF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 99 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 158
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + +GV P+ +Y++++ C + A LF
Sbjct: 159 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELF 217
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+
Sbjct: 218 DEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKN 277
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A K + M + V+Y
Sbjct: 278 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAY 337
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 338 TALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 397
Query: 405 AGEAP 409
G AP
Sbjct: 398 NGHAP 402
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 153 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESK-MD 211
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 212 DANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLI 271
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ + +A DL+++M KG PD +YTTL++ C++ L A+K RM +
Sbjct: 272 YGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIR 331
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EG+++DA K+L +M S G P++ +Y ++ C +G K
Sbjct: 332 LDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 391
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G +P + L+ G
Sbjct: 392 LKEMQRNGHAPSVVTYNVLMNG 413
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 189/401 (47%), Gaps = 19/401 (4%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILIT--- 120
L+ Q D LL+ E F++A + HS T+ I++ L + + F S++ D+L+
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 121 -LKSEHYPV----------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
L ++ + TP +F L K +A A TF M ++ P + N
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCN 207
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ L+ + + A ++ + + PN + N++M +C +G + L M
Sbjct: 208 AYMSSLLG-QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G SY L+ G C K ++ A+ L M G P+ +++ TL++ CR KL+E
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A K+ MK P+ V YNT++ G+ ++G A + EDM NG ++++Y L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC Q A ++++ + + P+ S ALI G C D + + ++++G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
+E T+ M+V C E+ + +VL E+V+ I D+R V
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++L ++ + T + LI + E L ALK M + +P N ++
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
L+ A +F V PNT +YN ++ + GD +A+ + M G+ D
Sbjct: 319 CRAMK-LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y L+ GLC++++ +A ++++ + VP++ +++ L+ C +K ++L
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M GC+P+ +N +V FCR A +VL +M + + + GL QG
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 356 MFDVAKKYMQLMISKGF 372
+ KK +Q M K F
Sbjct: 498 KDQLVKKLLQEMEGKKF 514
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F+L+KS + G PN +++N+++ AFC N D A + +M R + D + +
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GL + + LL++M K F+ ++ +
Sbjct: 492 GLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A ++ E+L G P T+ MI+ ++
Sbjct: 338 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEV 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVGKGSKLLKEM 413
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ F T ++ L + KYF L+ YP + F L + +
Sbjct: 98 TREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGD 157
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + H GV P+ +Y+
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD-LDEGFKLKSAMHASGVXPDVYTYS 216
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 217 VLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+PD ++Y TL+ LC+K L +A+ L+ M +KG PD + Y T++ G C+EG A
Sbjct: 277 SLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTA 336
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K M+ M+S G P +I
Sbjct: 337 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINE 396
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
C G V + +L+E+ G AP
Sbjct: 397 VCKKGDVGKGSKLLKEMQXDGHAP 420
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 113/201 (56%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+K +N+A DL+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 291 GLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y ++ G C+EGR++DA K++ +M S G P+ +Y ++ +C +G K +
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLL 410
Query: 365 QLMISKGFSPHFSVSHALIKG 385
+ M G +P + L+ G
Sbjct: 411 KEMQXDGHAPSVVTYNVLMNG 431
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L A DL
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK-KGDLNQAHDLIDEM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A ++ +ML+ G PDT +YT ++N +C+K + + KLL M+ G P +V YN +
Sbjct: 369 VDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVL 428
Query: 313 VLG 315
+ G
Sbjct: 429 MNG 431
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L M GV PDV +Y +
Sbjct: 152 IRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G CR+G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A VL E+L G P T+ MI+ +
Sbjct: 332 EHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 111 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 171 VVSFNTLMNGYIRLGD-LDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LCRK
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M +KG PD + Y T++ G C+EG A + + M + V Y
Sbjct: 290 GDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G + A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 350 TALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 405 AGEAP 409
G+ P
Sbjct: 410 DGQMP 414
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 1/315 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++FN + + G+ P V S+ LM G R
Sbjct: 127 ILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A +L M KG P+ V + T
Sbjct: 187 LDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + +++ + + ++ +C
Sbjct: 307 LKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAE 366
Query: 432 EVLNEIVKVEIKGDT 446
+VL E++ V +K DT
Sbjct: 367 KVLREMLSVGLKPDT 381
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN---------------------- 279
L+ GLCRK + +A DL+++M KG PD ++YTTL++
Sbjct: 282 LIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQEN 341
Query: 280 -------------SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
LC++ + +A K+L M G PD + Y ++ FC++G
Sbjct: 342 IQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGQMPSVVT 418
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 170/323 (52%), Gaps = 15/323 (4%)
Query: 121 LKSEHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRIL 172
LK + P++ T L+K +S AL+ ++ML NCKP + I+
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 646
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A +LFK GV+P+ SY ++ FC +G A LFN+M + GV
Sbjct: 647 DGLCKCGRE-DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV ++ +L+ LC++ +V A +LLE M+ +G +P+T++YTTL+ LC ++ EA +
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 765
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC----KVLEDMPSNGC--LPNLVSYRT 346
L +M+ GC PD+V Y T++ G C+ G A K+L D G P+++SY
Sbjct: 766 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 825
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC G D A++ + M + G P+ +LI GFC GK+++A + E++ G
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Query: 407 EAPHEDTWVMIVPQICAGEEMEK 429
+ T+ +++ C +++K
Sbjct: 886 VQLNAVTYSVMIHGFCKEGQIDK 908
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 169/360 (46%), Gaps = 50/360 (13%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRILELLVTHRNY 181
P TY L+K ++ + AL+ + ML CKP + I++ L R
Sbjct: 415 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 474
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A +LF+ G++P+ SY ++ FC +G A LFN+M + G+ PDV + +
Sbjct: 475 -DEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 533
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC+K +V A LLE ++ +G + D ++ TTL+ LC K ++ +A +L +M+ G
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593
Query: 302 CNPDIV-----------------------------------------HYNTVVLGFCREG 320
C P++V Y+ ++ G C+ G
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R +A ++ ++M + G +P+++SY +L+ G C G + AK M+ G P +
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
LI C GKV EA +LE +++ G P+ T+ +V +C + + + ++ ++ K+
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 153/317 (48%), Gaps = 13/317 (4%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK--- 190
T L+K + +A + F M + C P +++ L N ++ A +L K
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN-IKIALELHKNML 625
Query: 191 ---SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
S + PN SY+I++ C G A LF +M GV+PDV SY L+ G C
Sbjct: 626 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 685
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + A L +M++ G PD +++ L++ LC++ K+ EA +LL M +GC P+ V
Sbjct: 686 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 745
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T+V G C R +A ++ M GCLP++V+Y TL+ GLC G A + + M
Sbjct: 746 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 805
Query: 368 ISK------GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+S F P +I G C G+ DEA + +E+ G P+ ++ ++
Sbjct: 806 LSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGF 865
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++E + NE+V
Sbjct: 866 CRSGKLEDAKHLFNEMV 882
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 155/308 (50%), Gaps = 16/308 (5%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRILELLVTHRNY 181
P TY L+K ++ + AL+ + ML CKP + I++ L R
Sbjct: 122 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 181
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A +LFK G++P+ SY ++ FC +G A LFN+M + G+ PDV + +
Sbjct: 182 -DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C++ +V A +LLE M+++G + D ++Y+TL+ LC K ++ EA +L MK G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG------CL-PNLVSYRTLVGGLCDQ 354
C PD + Y T++ G C+ G+ A + ++M ++ C+ P++ + L+ LC +
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + +++MI +G LIKG C ++ EA + + K G P T+
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420
Query: 415 VMIVPQIC 422
++ +C
Sbjct: 421 GTLMKGLC 428
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 143/279 (51%), Gaps = 15/279 (5%)
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---- 229
L + HR + A LF S K G P+ +Y +M+ C G I+IA L +M
Sbjct: 280 LCMKHR--ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQ 337
Query: 230 ---RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ + PDV + +L+ LC++ +V A +LLE M+ +G + D ++Y+TL+ LC + +
Sbjct: 338 YGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 397
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG------CLPN 340
+ EA L M+ GC PD + Y T++ G C+ G A ++ ++M ++ C P
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
L+SY ++ GLC D A++ + M ++G P LI GFC GK ++A +
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
E+L G P T +++ +C ++ + ++L +++
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQ 556
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 13/325 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY---LRPAFDLF 189
++ LIK + A F SM + C+P +++ L N L+ ++
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444
Query: 190 KSAHKHGVL--PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++G+ P SY+I++ C + A LF +M +G+MPDV SY L+ G C
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +A L +ML+ G PD + + L++ LC+K K+ EA KLL + +GC D+V
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
T+V G C + R A ++ M GC+PN+V+ TL+ GLC G +A + + M
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624
Query: 368 ISKGFSPHF------SVSHA-LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+S SP+ ++S++ +I G C G+ DEA + +E+ G P ++ ++
Sbjct: 625 LSD-TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGD 445
C + + + NE+V + ++ D
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPD 708
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 124/241 (51%), Gaps = 9/241 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y LI + S A F M++ +P + ++++L + A
Sbjct: 670 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE-A 728
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + + G +PNT +Y +++ C N IS A LF KM + G +PDV +Y LM+G
Sbjct: 729 NELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKG 788
Query: 246 LCRKSQVNRAVDLLEDMLNK------GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LC+ + A++L + ML+ F PD +SY+ +++ LC+ + EA +L MK
Sbjct: 789 LCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKA 848
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G P+++ Y +++ GFCR G+ DA + +M G N V+Y ++ G C +G D
Sbjct: 849 LGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK 908
Query: 360 A 360
A
Sbjct: 909 A 909
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 133/258 (51%), Gaps = 15/258 (5%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI---------LMQGL 246
G+ P++ ++NI++ C ++ + RG +PD+ +Y I L+ L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +V A +LLE M+ +G + D ++Y+TL+ LC + ++ EA L M+ GC PD
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNG------CLPNLVSYRTLVGGLCDQGMFDVA 360
+ Y T++ G C+ G A ++ ++M ++ C P L+SY ++ GLC D A
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ + M ++G P +LI GFC+ GK ++A + E+L G P T +++
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Query: 421 ICAGEEMEKLGEVLNEIV 438
C ++ + E+L +V
Sbjct: 245 FCKEGKVIEANELLEVMV 262
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 8/235 (3%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+ + P+ + ++++ C G + A L M +RG + D+ +Y L++GLC + +++
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL-------LCRMKVKGCNPDIV 307
A L M G PD ++Y TL+ LC+ + A +L R +K C P ++
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK-CKPTLI 166
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ G C++ R +A ++ ++M + G +P+++SY +L+ G C G ++ AK M
Sbjct: 167 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM 226
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ G P + S LI FC GKV EA +LE ++ G T+ ++ +C
Sbjct: 227 LDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 56/309 (18%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + + G + + +Y+ +++ C IS A LF M + G PD +Y LM+
Sbjct: 73 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 132
Query: 245 GLCRKSQVNRAVDLLEDMLNKG------FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
GLC+ +N A+ L ++MLN P +SY+ +++ LC+ ++ EA +L MK
Sbjct: 133 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 192
Query: 299 VKGCNPDIVHYNTVVLG-----------------------------------FCREGRAI 323
+G PD++ Y +++ G FC+EG+ I
Sbjct: 193 AQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVI 252
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A ++LE M GC+ ++V+Y TL+ GLC + A + M G P L+
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312
Query: 384 KGFCNVGKVDEACGVLEELLKAGEA-------PHEDTWVMIVPQICAGEEMEKLGEVL-- 434
KG C GK++ A + +E+L P T M++ +C K G+V+
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC------KEGKVIEA 366
Query: 435 NEIVKVEIK 443
NE+++V I+
Sbjct: 367 NELLEVMIQ 375
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT---------LLNSL 281
G+ PD ++ IL+ LC +VN + + ++ +G++PD ++Y+ L++ L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ K+ EA +LL M +GC DIV Y+T++ G C E R +A + M GC P+
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKG------FSPHFSVSHALIKGFCNVGKVDEA 395
++Y TL+ GLC G ++A + Q M++ P +I G C + DEA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ +E+ G P ++ ++ C + EK + NE++ V I+ D
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPD 234
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRIL 172
+K + P + TY L+K ++ AL+ + ML N KP + I+
Sbjct: 768 MKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 827
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L H A +LFK GV+PN SY ++ FC +G + A LFN+M ++GV
Sbjct: 828 DGLCKHGRE-DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 886
Query: 233 MPDVESYRILMQGLCRKSQVNRAV 256
+ +Y +++ G C++ Q+++A+
Sbjct: 887 QLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT---------L 347
M++ G PD +N ++ C R + + + G +P++V+Y L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ LC +G A + +++MI +G LIKG C ++ EA + + K G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 408 APHEDTWVMIVPQIC 422
P T+ ++ +C
Sbjct: 121 RPDAITYGTLMKGLC 135
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R + +F + K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 IRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L +ML+KG VP+ +++TTL++ C+ K+ A ++ +M +
Sbjct: 212 LINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++ +M G P+ ++Y TL+ G C G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ FR T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 92 TREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+ F ++ ++ +P N ++ + + L F L + H GV P+ +Y+
Sbjct: 152 IRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGD-LDKGFRLKSAMHASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF +M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C++G A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGHVP 414
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D A + F ML+ P +++ + + A
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGK-VDLA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++K + P+ +YN ++ C GD+ A L N+M +G+ PD +Y L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + A + + M+ + D ++YT L++ LC++ + +A K+L M G PD
Sbjct: 321 SCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y ++ FC++G K+L++M +G +P++V+
Sbjct: 381 SGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 392 CKKGDVWKGSKLLKEM 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 111 LMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 171 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 230 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 290 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 409
Query: 405 AGEAP 409
G AP
Sbjct: 410 NGHAP 414
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 165 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 223
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 224 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 284 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 343
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P++ +Y ++ C +G K
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 403
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G +P + L+ G
Sbjct: 404 LKEMQRNGHAPSVVTYNVLMNG 425
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 188/405 (46%), Gaps = 28/405 (6%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P Q+ S+ P +P V L A DP A F++ + +P F+H+ +Y +
Sbjct: 49 SRPNWQKHPSL-RKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSM 107
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML---E 158
+ L RA+ + + I I++ + LF L+ FR M E
Sbjct: 108 LNILIRARLLGVAEKIRISMIKSCCSIEDVLFV---------------LEVFRKMNADGE 152
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH----KHGVLPNTKSYNIMMRAFCFN 214
F KP + N IL ++ +L D K+ + + + PN ++N M+ +C
Sbjct: 153 FKFKPTLRCYNTIL---MSLSKFL--LIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKI 207
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A +K+ + G+ PD +Y L+ G CR V+ A ++ M KG + +SY
Sbjct: 208 GNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSY 267
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T L++ LC ++ EA KL M C P + Y ++ GR ++A + +M
Sbjct: 268 TNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKE 327
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC PN+ +Y L+ GLC + D A+K + M KG P +ALI G+C G +D+
Sbjct: 328 KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A +L+ + P+ T+ ++ +C ++ K +LN++++
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 179/362 (49%), Gaps = 3/362 (0%)
Query: 84 YASR--QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
YAS+ Q TY LIL R K ++ + + + +T LI
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
E+ + ALK F M E NC P + ++ L + A +LF + G PN
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVE-ALNLFNEMKEKGCEPNV 334
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+Y +++ C + A + ++M E+G++P V +Y L+ G C++ ++ A ++L+
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + P+T +Y L+ LC+K+K+ +A LL +M + +P ++ YN+++ G C+
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A ++L M NG +P+ +Y + LC +G + A + +KG + + A
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI G+C VGK+D A +LE +L P+ T+ +++ +C ++M++ ++ +++ +
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Query: 442 IK 443
+K
Sbjct: 575 VK 576
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 3/319 (0%)
Query: 130 PSLFTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY + IYA S + AL F M E C+P +++ L N + A
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL-CKENKMDEARK 355
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G++P+ +YN ++ +C G I A+ + + M P+ +Y L+ GLC
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K +V++A+ LL ML + P ++Y +L++ C+ L AY+LL M G PD
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ + C+EGR +A + + + + G N V Y L+ G C G DVA ++ M
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
++ P+ + LI+G C K+ EA ++ ++L G P T+ +++ ++
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ +V N +V + + D
Sbjct: 596 DHALKVFNHMVSLGYQPDV 614
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI Y + + D A + M +C P + N ++ L R + A
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK-VHKA 423
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + P+ +YN ++ C D+ AY L + M E G++PD +Y + +
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ +V A L + + KG + + YT L++ C+ K+ AY LL RM C P+
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN ++ G C+E + +A ++ M + G P +V+Y L+G + G FD A K
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G+ P A + + + G ++E V+ ++ + G P T+ +++
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 1/302 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + N D A K M E P N +++ + AF++
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG-YCKEGMIDDAFEILDLM 395
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PNT++YN ++ C + A L NKM ER + P + +Y L+ G C+ + +
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A LL M G VPD +Y+ +++LC++ ++ EA L +K KG + V Y +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C+ G+ A +LE M ++ CLPN +Y L+ GLC + A + M++ G
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P LI G D A V ++ G P T+ + + +E++ +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 433 VL 434
V+
Sbjct: 636 VI 637
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 158/403 (39%), Gaps = 65/403 (16%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A EI D PN R N L K K +L++ +L ++PSL T
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML------ERKLSPSLIT 441
Query: 135 YLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y I+ + + D A + M E P + ++ L + A LF S
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL-CKEGRVEEAGTLFDSV 500
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
GV N Y ++ +C G I +AY+L +M +P+ +Y +L++GLC++ ++
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L+ ML G P ++YT L+ + + A K+ M G PD+ Y
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM---------------- 356
+ + +G + V+ M G LP+LV+Y L+ G G+
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680
Query: 357 -------------------------------------FDVAKKYMQLMISKGFSPHFSVS 379
+++A K + M+ G + S+
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIY 740
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
ALI GFC +++EA G++ + + G +P ED + ++ C
Sbjct: 741 GALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 783
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 21/311 (6%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY I I + D ALK F M+ +P L + + L
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS-QGMLEEV 633
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ ++ G+LP+ +Y +++ + G A+ M + G P + IL++
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693
Query: 246 LCRKSQVNR------------------AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
L ++++ A+ L E M+ G D Y L+ C++++L
Sbjct: 694 LSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 753
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA L+ MK +G +P YN+++ C+ G +A ++++ M NG LP L SY+ L
Sbjct: 754 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V GL +G + AK ++S G++ LI G VDE +++ + + G
Sbjct: 814 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGC 873
Query: 408 APHEDTWVMIV 418
P+ T+ +++
Sbjct: 874 QPNPLTYSLLI 884
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 155/393 (39%), Gaps = 57/393 (14%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
S ++ + K GR + + D ++K++ ++T LI Y + D A
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFD---SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
ML C P N ++E L + ++ A L GV P +Y I++ +G
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKK-MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 216 DISIAYTLFN-----------------------------------KMFERGVMPDVESYR 240
A +FN KM E G++PD+ +Y
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE----------- 289
+L+ G R +RA D L+ M++ G P + L+ +L + +++E
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 290 -------AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
A KL +M GC D+ Y ++ GFC++ R +A ++ M G P+
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y +L+ C G++ A + + M+ G P L+ G G ++A V L
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
L G E W +++ + + +++ E+++
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 866
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 22/275 (8%)
Query: 114 IDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
+DD++ + E + P L TY LI YA L RA + M++ CKP + I
Sbjct: 633 VDDVIAKMNEE--GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP-SLYIVSI 689
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L ++H N ++ +S + NT Y I ++ LF KM E G
Sbjct: 690 LIKNLSHENRMKET----RSEIGIDSVSNTLEYEIALK-------------LFEKMVEHG 732
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
DV Y L+ G C++ ++ A L+ M +G P Y +LL+ C+ EA
Sbjct: 733 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 792
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L+ M G P + Y +V G EG A V + S G + V+++ L+ GL
Sbjct: 793 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 852
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + D + + +M KG P+ LI+G
Sbjct: 853 LKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 172/358 (48%), Gaps = 11/358 (3%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V ++ Q+DPL A E+F+ A + F+H+ STY ++ KLG F ++ +L +
Sbjct: 7 PKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM 66
Query: 122 KSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + + + +K Y A+ TF M +NC P N I+ +LV
Sbjct: 67 RENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEF-G 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y A ++ GV + +Y I +++FC A L M E G + +Y
Sbjct: 126 YHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYC 185
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ GL + + A +L ++ML + PD +++ L++ LC+K + E+ +LL ++ +
Sbjct: 186 TVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR 245
Query: 301 GCNPDIVHYNTVVLGFCREG---------RAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
G P++ +N V G CREG R ++A + L M + G P+ ++Y +++ G
Sbjct: 246 GVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGY 305
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C +GM A + ++ + KGF P +LI GFC G D A V ++ L G P
Sbjct: 306 CKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRP 363
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 173/378 (45%), Gaps = 49/378 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI + + PDRA+ F+ L +P N +++ L + + + PA
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGL-SQQGLILPALQ 386
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L ++G LPN +YN+++ C G +S A L + +G PD+ +Y L+ G C
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYC 446
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ A +++ M ++G PD ++Y TLLN LC+ K E ++ M+ KGC P+I+
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD--------- 358
YN +V C+ + +A +L +M S G P++VS+ TL G C G D
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Query: 359 ---------------------------VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+A K +M + G P +I GFC +G
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM-EKLG--------EVLNEIVKVEI 442
+ + L E ++ P T+ ++ +C +++ E +G ++ E V
Sbjct: 627 ITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIF 686
Query: 443 KGDTRIVEA-GIGLEDYL 459
+ D ++V A I +ED L
Sbjct: 687 EADKKVVAAPKILVEDLL 704
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 182/369 (49%), Gaps = 18/369 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ + P+ HS++ + ++++ G Y + + + ++ V ++TY I+I
Sbjct: 100 ERMDFYNCDPSV-HSHNAIMNILVEFG---YHNQAHKVYMRMRDR--GVQSDVYTYTIRI 153
Query: 140 --YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ ++ P AL+ R+M E C ++ L + A +LF +
Sbjct: 154 KSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH-DHARELFDEMLARCL 212
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV- 256
P+ ++N ++ C G + + L K+ +RGV P++ ++ I +QGLCR+ ++RAV
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR 272
Query: 257 --------DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ L M+N GF PD L+Y ++++ C+K +++A ++L KG PD
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFT 332
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y +++ GFC++G A V +D G P++V Y TL+ GL QG+ A + M M
Sbjct: 333 YCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMA 392
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G P+ + +I G C +G V +A ++++ + G P T+ ++ C +++
Sbjct: 393 ENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLD 452
Query: 429 KLGEVLNEI 437
E++N +
Sbjct: 453 SATEMVNRM 461
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 29/321 (9%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+LFT+ I + DRA++ R +V YLR
Sbjct: 247 VCPNLFTFNIFVQGLCREGALDRAVRNSR--------------------VVEAEEYLRKM 286
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G P+ +YN ++ +C G + A + +G PD +Y L+ G
Sbjct: 287 VN-------GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLING 339
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +RA+ + +D L KG P + Y TL+ L ++ + A +L+ M GC P+
Sbjct: 340 FCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPN 399
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN V+ G C+ G DA +++D + GC P++ +Y TL+ G C Q D A + +
Sbjct: 400 IWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVN 459
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S+G +P + L+ G C GK +E + + + + G P+ T+ +IV +C +
Sbjct: 460 RMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAK 519
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
++ + ++L E+ +K D
Sbjct: 520 KVNEAVDLLGEMKSKGLKPDV 540
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKS-YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE-SYRIL 242
A ++F SA +T S Y +++ +G+ L ++M E +E +Y
Sbjct: 23 ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEA 82
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
M+ RK +V AVD E M P S+ ++N L +A+K+ RM+ +G
Sbjct: 83 MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D+ Y + FC+ R A ++L +MP GC N V+Y T+V GL D G D A++
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+++ P + L+ C G V E+ +L ++LK G P+ T+ + V +C
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y M+ + G + A F +M P V S+ +M L N+A + M
Sbjct: 78 AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++G D +YT + S C+ + A +LL M GC+ + V Y TVV G G
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH 197
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A ++ ++M + P++V++ LV LC +G+ +++ + ++ +G P+ +
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257
Query: 383 IKGFCNVGKVD---------EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
++G C G +D EA L +++ G P + T+ I+ C ++ V
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317
Query: 434 LNEIV 438
L + V
Sbjct: 318 LKDAV 322
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 46/266 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP + TY L+ ++ + ++ F++M E C P N I++ L + + A
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKK-VNEA 524
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER--------------- 230
DL G+ P+ S+ + FC GDI AY LF +M ++
Sbjct: 525 VDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVS 584
Query: 231 ---------------------GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
G PD +YR+++ G C+ + + L + + K F+P
Sbjct: 585 AFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIP 644
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
++ +LN LC K K+ EA ++ M KG P+ V NT+ F + + + A K+L
Sbjct: 645 SLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTI---FEADKKVVAAPKIL 699
Query: 330 -EDMPSNGCLPNLVSYRTLVGGLCDQ 354
ED+ G + +Y L G+ D+
Sbjct: 700 VEDLLKKGHIA-YYTYELLYDGIRDK 724
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 136/236 (57%), Gaps = 3/236 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN M+ +C G + A L +M V PD +Y L++GLC + + A+ +L++M
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L + VPD ++YT LL + C++ ++A KLL M+ KGC PDIV YN VV G C+EGR
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA + L+++PS GC PN VSY ++ GLC ++ A++ M M KG P+ + L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
I C G V+ A VLE++ K G P+ ++ ++ C ++M+K L+ +V
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 148/298 (49%), Gaps = 5/298 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD + LK+ Y P+ +Y ++K + + A + M + C P N
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + + PA ++ + K+G PN+ SYN ++ AFC + A + M R
Sbjct: 178 LISFLC-RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ AV+LL + +KG P +SY T+++ L + K +EA
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CRE R DA + + G PN V Y ++ G
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL-KAGE 407
LC + A MI G P+ S LI+G G + EA +L+EL +AGE
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGE 414
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 153/285 (53%), Gaps = 5/285 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + +P+ +Y I++ A C A L ++M ++G PD+ +Y +++
Sbjct: 51 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 110
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+C++ +V+ A++ L+++ + G P+T+SY +L LC ++ +A +L+ M KGC P
Sbjct: 111 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 170
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +N ++ CR+G A +VLE +P GC PN +SY L+ C Q D A ++
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-A 423
LM+S+G P + L+ C G+VD A +L +L G AP ++ ++ + A
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 290
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLEDYLIGKTRS 465
G+ E L E+LNE+V ++ D + AG+ ED + R+
Sbjct: 291 GKTKEAL-ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 334
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 3/300 (1%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY I + A +A+K M + C P N ++ + + A
Sbjct: 64 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG-ICQEGRVDDAI 122
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ K+ +G PNT SYNI+++ C A L +M ++G P+V ++ +L+ L
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 182
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CRK V A+++LE + G P++LSY LL++ C++KK+ +A L M +GC PDI
Sbjct: 183 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 242
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ CR G A ++L + GC P L+SY T++ GL G A + +
Sbjct: 243 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 302
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+SKG P + G C ++++A ++ G P+ + I+ +C E
Sbjct: 303 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 362
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 3/329 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY LI+ AL ML C P +LE Y +
Sbjct: 27 PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY-KQ 85
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L G P+ +YN+++ C G + A + G P+ SY I+++
Sbjct: 86 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 145
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A +L+ +M KG P+ +++ L++ LCRK + A ++L ++ GC P
Sbjct: 146 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 205
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN ++ FC++ + A L+ M S GC P++VSY TL+ LC G DVA + +
Sbjct: 206 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 265
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ KG +P + +I G GK EA +L E++ G P T+ I +C
Sbjct: 266 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 325
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ +E ++ + I+ +T + A I
Sbjct: 326 DRIEDAIRAFGKVQDMGIRPNTVLYNAII 354
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 165/311 (53%), Gaps = 3/311 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY ++ + D A++ +++ + C+P N +L+ L T + A
Sbjct: 99 TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW-EDAE 157
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L + G PN ++N+++ C G + A + ++ + G P+ SY L+
Sbjct: 158 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++++A+ L+ M+++G PD +SY TLL +LCR ++ A +LL ++K KGC P +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L +M S G P++++Y T+ GLC + + A +
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G P+ + +A+I G C + A + ++ G P+E T+ +++ +
Sbjct: 338 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 397
Query: 427 MEKLGEVLNEI 437
+++ ++L+E+
Sbjct: 398 IKEARDLLDEL 408
>gi|225466731|ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Vitis vinifera]
Length = 503
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 203/423 (47%), Gaps = 26/423 (6%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P ++ ++I +Q +PL A +IF+ A S+ PN+RH+ Y +I LG + + + +++
Sbjct: 11 PTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAEMREVIDQ 70
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + S+F+ ++K YA + + D A+ F+++ +FNC N +L +LV +
Sbjct: 71 MKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTLLRILVKE-S 129
Query: 181 YLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
L A LF H G V S N++M A C +A +F +M + PD ES
Sbjct: 130 KLETACRLFLE-HSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQCCSPDKES 188
Query: 239 YRILMQGLCRKSQVNRAVDLLEDML----NKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
YRILM+GLC ++N A LL M KG D +Y TLL++LC + EA ++L
Sbjct: 189 YRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHVEEALEIL 248
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCD 353
++ KG + L +C G I+ K ++ + G +P++ SY + L
Sbjct: 249 GKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYSAMAIDLYS 308
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL-EELLKAGEAPHED 412
+ A + + M +GF P S+ A I C G V+EA V+ EE+++ P
Sbjct: 309 ERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEMVEDSCVPTVR 368
Query: 413 TWVMIVPQIC-------AGEEMEKLGEVLN-----EIVKVEIKG---DTRIVEAGIGLED 457
+ +++ +C A +EK+ + E + + G D R VEA LE
Sbjct: 369 LYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVEASGILER 428
Query: 458 YLI 460
LI
Sbjct: 429 MLI 431
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 3/247 (1%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG-DISIAYTLFNKMFERGVMPDVES 238
++ A ++ K G+ + + ++C NG DI L N+ RG +P + S
Sbjct: 239 GHVEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMAS 298
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y + L + ++ A +L++M ++GF P Y + +LCR + EA K++
Sbjct: 299 YSAMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKVIKEEM 358
Query: 299 VK-GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGM 356
V+ C P + YN V+ G CREG++ A LE M GC+ + +Y LV GLC G
Sbjct: 359 VEDSCVPTVRLYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGR 418
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
F A ++ M+ + SP + LI+G C +G+ +A LEE++ G+ P W
Sbjct: 419 FVEASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVVQGKLPAVSVWDS 478
Query: 417 IVPQICA 423
+V +C+
Sbjct: 479 LVASVCS 485
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 131/240 (54%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T ++N ++RA C G I A +F+ M RG P V +Y IL+ C++S +A+ L
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++M KG PD ++Y L+N++C + + EA +L + GC PD V Y V+ C
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCG 368
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R + ++L +M SN C P+ V++ T+V LC QG+ D A + + M G
Sbjct: 369 SERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+++ G C+VG+VD+A +L L G P + ++ +C+ E+ E+ E++ E++
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 150/295 (50%), Gaps = 3/295 (1%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY + I A N D AL ++ CKP +L+ L + + +
Sbjct: 319 PDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW-KEVEE 377
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + P+ ++N ++ + C G + A + + M E G + D+ +Y ++ GLC
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC 437
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V+ AV+LL + + G PDT++YTT+L LC ++ A +L+ M C PD V
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NTVV C++G A +V+E M NGC P++V+Y ++ GLC++ D A + + +
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
S G P + L+KG C V + ++A ++ ++++ P E T+ ++ +C
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 157/322 (48%), Gaps = 5/322 (1%)
Query: 127 PVTPSLFTY--LIK-IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
P P FT+ LI+ + +PD AL F ML C P + +L+ Y R
Sbjct: 246 PFPPDTFTFNPLIRALCVRGRIPD-ALAVFDDMLHRGCSPSVVTYSILLDATCKESGY-R 303
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L G P+ +YN+++ A C GD+ A + + + G PD +Y ++
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ LC + +LL +M + PD +++ T++ SLC++ + A +++ M GC
Sbjct: 364 KSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
DIV Y++++ G C GR DA ++L + S GC P+ ++Y T++ GLC ++ A++
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M M+ P + ++ C G VD A V+E++ + G +P T+ I+ +C
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCN 543
Query: 424 GEEMEKLGEVLNEIVKVEIKGD 445
++ E+L+++ K D
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPD 565
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 161/339 (47%), Gaps = 1/339 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI + +IL L S +T ++K S + M
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEM 382
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
NC P N I+ L + + A ++ +HG + + +Y+ ++ C G
Sbjct: 383 TSNNCAPDEVTFNTIVTSLC-QQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +++ G PD +Y +++GLC Q RA +L+ +ML PD +++ T
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ SLC+K + A +++ +M GC+PDIV YN ++ G C E DA ++L D+ S G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P++V++ TL+ GLC ++ A++ M M+ P + +I C G + +A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
L+ + + G P+ T+ ++V + + + E+L+
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 148/320 (46%), Gaps = 9/320 (2%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A++ + + CKP +L+ L + + R A +L P+ ++N
Sbjct: 443 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWER-AEELMAEMLCSDCPPDEVTFNT 501
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + C G + A + +M E G PD+ +Y ++ GLC +S ++ A++LL D+ + G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD +++ TLL LC + +A +L+ M C PD + +NTV+ C++G A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ L+ M NGC+PN +Y +V L G A + + M + +P + +I
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNL 679
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
GK++EA +L ++ G P T+ + +C + ++ +L + + DT
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739
Query: 447 RIVEAGIGLEDYLIGKTRSR 466
D L+G R R
Sbjct: 740 TF------YNDVLLGFCRDR 753
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 166/353 (47%), Gaps = 4/353 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y ++ L + + ++++ + P F ++ + L DRA++ M
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
E C P N I++ L + + + A +L G P+ ++N +++ C
Sbjct: 524 ENGCSPDIVTYNCIIDGLC-NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A L M PD ++ ++ LC+K + +A++ L+ M G VP++ +Y+ +
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+++L + K + A +LL M PD++ YNTV+ + G+ +A +L M SNG
Sbjct: 643 VDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +YR+L G+C + D A + ++ + G SP + + ++ GFC + D A
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
++ +G P E T+V+++ + G +++ +L + + + D +++E
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL-DKKLIE 812
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGF--VPDTLSYTTLLNSLCRKKKLREAYKLL 294
E + ++ L ++ +++ A+ L + M + G P + L+ LC ++ +A ++
Sbjct: 151 EGAKRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF 210
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCR--------------------------------EGRA 322
+ G + +V YNT+V G+CR GR
Sbjct: 211 AAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRI 267
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA V +DM GC P++V+Y L+ C + + A + M +KG P + L
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
I CN G VDEA +L L G P T+ ++ +C E +++ E+L E+
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A + ++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T +I L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 XDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL ++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYVPSVVT 418
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRILMQ-------GLCRK--------SQVNRAVDLL 259
DI + L E G + D +E YR+ + CRK
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + ++L +P T+ ++ +C ++++ ++ +E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD++ + L + M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L E+ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 272 LLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A ++ E+L G P T+ MI+ +
Sbjct: 332 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 392 CKKGDVWKGSKLLKEM 407
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ F T ++ L + KYF+L+ + YP + F L+ + +
Sbjct: 92 TREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGD 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + H GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD-LNEGFKLKSAMHASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF +M +G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+PD ++Y TL+ LC+K L +A+ L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K M+ M+S G P +I
Sbjct: 331 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V + +L+E+ + G AP
Sbjct: 391 FCKKGDVWKGSKLLKEMQRDGHAP 414
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF+ G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y
Sbjct: 222 MDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K +N+A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K++ M G PD Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G P++V+
Sbjct: 402 KLLKEMQRDGHAPSVVT 418
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 191/411 (46%), Gaps = 45/411 (10%)
Query: 49 ESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRA 108
+ + NS + +P V K++ Q+D A F +A +Q + H+ Y +I LGRA
Sbjct: 170 QDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRA 229
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
K F+ + +L ++++ +T S+ + Y S +L+ F M E +P
Sbjct: 230 KMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEP----- 284
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
G++ +YN ++ + N + +A LF +M
Sbjct: 285 ---------------------------GLIDT--AYNSVLVSLVKNKKLDMAENLFAQMI 315
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
GV + +Y ++Q K ++ A+ LL+DM+ + PD ++YT ++++LC++K +
Sbjct: 316 NNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIE 375
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+AY +L +M+ GC P+I YN ++ G C R +A +++ M G PN+ +Y L
Sbjct: 376 QAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILT 435
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC D AK+ +++G P+ + L+ G+C ++ EA +L+E+ +
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCT 495
Query: 409 PHEDTWVMIVPQICAG----------EEMEKLGEVLN-EIVKVEIKGDTRI 448
P T+ ++ + G +EME G +N + + + +G R+
Sbjct: 496 PDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARV 546
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 161/336 (47%), Gaps = 17/336 (5%)
Query: 94 SNSTYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPD 147
+N TY +I LK L+DD++ +Y P + TY I I A + + +
Sbjct: 322 NNLTYTSMIQCFFLKEKMEDAMKLLDDMI----QNNY--APDVVTYTIVISALCKRKMIE 375
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSYN 205
+A + M E C+P N +++ L R RP A +L + GV PN +Y
Sbjct: 376 QAYGVLQKMRENGCEPNIYTYNALIQGLCAVR---RPEEALELVTLMEQGGVPPNIYTYT 432
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I+ C + A +FN+ RG+ P+ +Y L+ G CR S++ A+D+L++M
Sbjct: 433 ILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQN 492
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++YTTL+ L + +L +A ++ M+ KG + + N + G R G DA
Sbjct: 493 DCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDA 552
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
M G + Y + L G + A+ + MI+KG+SP+ + + +IKG
Sbjct: 553 SIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKG 612
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
FC G++D+A +L +++ G P ++ +++ +
Sbjct: 613 FCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 165/352 (46%), Gaps = 1/352 (0%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
++ Y +++ L + K + +++ + + +T +I+ + + A+K
Sbjct: 288 DTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLD 347
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ N P ++ L R + A+ + + ++G PN +YN +++ C
Sbjct: 348 DMIQNNYAPDVVTYTIVISALCK-RKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAV 406
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
A L M + GV P++ +Y IL GLC+ +++RA ++ + L +G P+ ++Y
Sbjct: 407 RRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTY 466
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TLLN CR +L EA +L M C PD V Y T++ G + + DA ++ ++M +
Sbjct: 467 NTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMEN 526
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G N + L GL G A + + M +GF+ S + I G+++E
Sbjct: 527 KGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEE 586
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
A +L E++ G +P+ T+ ++ C ++ +LN +++ I DT
Sbjct: 587 AQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDT 638
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 3/198 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ TY L+ Y + A+ + M + +C P +++ LV N L A
Sbjct: 461 PNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLV-QGNQLPDALR 519
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G N + NI+ R G+ A + +M +RG Y + + L
Sbjct: 520 MHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLS 579
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ A LL +M+NKG+ P+ +Y T++ CR+ +L +A +L M G PD
Sbjct: 580 TAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTG 639
Query: 308 HYNTVVLGFCREGRAIDA 325
YN ++ F +GR DA
Sbjct: 640 SYNILIKEFHNQGRTQDA 657
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 156 IRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 215
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 216 LINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQS 275
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ +SY TL+ G C +G + A
Sbjct: 276 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAF 335
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 336 EHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEF 395
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 396 CKKGDVWTGSKLLKEM 411
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + AL F ++ ++ +P
Sbjct: 115 LMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPS 174
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 175 VVSFNTLMNGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 233
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 234 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKK 293
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M++KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 294 GDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 353
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 354 TALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 413
Query: 405 AGEAP 409
G P
Sbjct: 414 DGHVP 418
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A DL
Sbjct: 248 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCK-KGDLKQAQDLIDEM 306
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ SY ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PDT +YT ++N C+K + KLL M+ G P +V YN +
Sbjct: 367 IDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 426
Query: 313 VLG 315
+ G
Sbjct: 427 MNG 429
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 152/312 (48%), Gaps = 3/312 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L TY LI+ Y D ALK ML +P N I L R AF+
Sbjct: 113 PTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDR-AFE 171
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ + G P+ +YNI++RA G +++F RG P+V +Y IL+ LC
Sbjct: 172 FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLC 231
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ +V+L++ M KG PD Y L+ + CR+ KL A + L M G PDIV
Sbjct: 232 RDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIV 291
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+YNT++ C+ G A ++ + GC PN+ SY T++ L G A + M
Sbjct: 292 NYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQM 351
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+SKG P ++LI C G VDEA G+L ++L P+ ++ ++ +C +
Sbjct: 352 LSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRI 411
Query: 428 EKLGEVLNEIVK 439
+ EVL +++
Sbjct: 412 DDAIEVLAAMIE 423
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 13/351 (3%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
LA ++F+ + N + + TY ILI L+ G + L+D++L + P
Sbjct: 97 LALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEML------SRGLEPDT 150
Query: 133 FTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
FTY + + + DRA + R++ CKP N +L L+ +
Sbjct: 151 FTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKW-DEGEKWMS 209
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G PN +Y+I++ + C +G I + L M E+G+ PD Y L+ CR+
Sbjct: 210 EIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG 269
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ A++ L+ M+ GF+PD ++Y T++ +LC+ A ++ ++ GC P++ YN
Sbjct: 270 KLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYN 329
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T++ G A ++ M S G P++++Y +L+ LC GM D A + M+S
Sbjct: 330 TMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSG 389
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
F P+ ++ G C ++D+A VL +++ G P+E T+ +++ I
Sbjct: 390 RFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 154/310 (49%), Gaps = 3/310 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L T LIK + S D+A + +LE + KP N ++ N + A +
Sbjct: 12 LCTKLIKGFFNSRNIDKATRVM-GILEKHGKPDVFAYNAVISGFC-KANRIESAKTVLDR 69
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKS 250
+ G P+ ++NIM+ FC G I +A +F ++ + P + +Y IL++ +
Sbjct: 70 MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG 129
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ A+ LL++ML++G PDT +Y + LC++ K+ A++ + + +GC PD++ YN
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ +G+ + K + ++ S GC PN+V+Y L+ LC G + + +++M K
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G +P LI FC GK+D A L+ ++ G P + I+ +C +
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHA 309
Query: 431 GEVLNEIVKV 440
E+ ++ +V
Sbjct: 310 VEIFGKLDEV 319
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 151/295 (51%), Gaps = 3/295 (1%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY + I A N D AL + CKP +L+ L + + +
Sbjct: 230 PDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW-KEVEE 288
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF + P+ ++N ++ + C G + A + + M E G +PD+ +Y ++ GLC
Sbjct: 289 LFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLC 348
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V+ AV+LL + + G PDT++YTT+L LC ++ A +L+ M C PD V
Sbjct: 349 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEV 408
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NTV+ C++G A KV+E M NGC P++V+Y +++ GLC++ D A + + +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
S G P + L+KG C+V + ++A ++ ++ + P T+ ++ +C
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC 523
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 129/240 (53%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T ++N ++RA C G + A +F+ M RG P V +Y IL+ C+ S +A+ L
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVL 219
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++M KG PD ++Y L+N++C + + EA +L + GC PD V Y V+ C
Sbjct: 220 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCG 279
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R + ++ +M SN C P+ V++ T+V LC QG+ D A K + M G P
Sbjct: 280 SERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT 339
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+++ G C+VG+VD+A +L L G P + ++ +C+ E+ E E++ E+V
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 127 PVTPSLFTY--LIK-IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
P P FT+ LI+ + +PD AL F ML C P + +L+ Y R
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPD-ALAVFDDMLHRGCSPSVVTYSILLDATCKASGY-R 214
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L G P+ +YN+++ A C GD+ A + + + G PD +Y ++
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ LC + +L +M + PD +++ T++ SLC++ + A K++ M GC
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDIV Y++++ G C GR DA ++L + S GC P+ ++Y T++ GLC ++ A++
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M M+ P + +I C G VD A V+E++ + G P T+ I+ +C
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454
Query: 424 GEEMEKLGEVLNEIVKVEIKGD 445
++ E+L+ + K D
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPD 476
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 162/335 (48%), Gaps = 2/335 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI + +IL L S +T ++K S + F M
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM 293
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I+ L + + A + +HG +P+ +Y+ ++ C G
Sbjct: 294 ASNKCAPDEVTFNTIVTSLC-QQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +++ G PD +Y +++GLC Q A +L+ +M+ PD +++ T
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ SLC+K + A K++ +M GCNPDIV YN+++ G C E DA ++L ++ S G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P++V++ TL+ GLC ++ A++ M M+ P + + +I C G + +A
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKL 430
L+ + + G P++ T+ ++V + AG+ E L
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 6/364 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L ++ + ++++ + S F ++ + L DRA+K M
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C P + IL+ L + A +L +G P+T +Y +++ C
Sbjct: 329 SEHGCIPDIVTYSSILDGLC-DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +M PD ++ ++ LC+K V+RA+ ++E M G PD ++Y +
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ LC ++ + +A +LL ++ GC PDIV +NT++ G C R DA +++ +M +
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P+ ++ T++ LC +G+ A + +++M G P+ S + ++ GK EA
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGI 453
+L + P T+ ++ I +ME+ ++L +V + DT R + GI
Sbjct: 568 KLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGI 625
Query: 454 GLED 457
ED
Sbjct: 626 CRED 629
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 6/336 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y ++ L + + ++++ + P F +I + L DRA+K M
Sbjct: 375 YTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
E C P N I++ L R + A +L + +G P+ ++N +++ C
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNER-CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A L M PD ++ ++ LC+K + +A++ L+ M G +P+ +Y +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+++L + K +EA KLL M PD++ YNTV+ + G+ +A +L M SNG
Sbjct: 554 VDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ ++YR+L G+C + D A + + + G SP + + ++ GFC + D A
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671
Query: 398 VLEELLKAGEAPHEDTWVMIVPQI---CAGEEMEKL 430
++ +G P E T+++++ + C +E ++L
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQL 707
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 130/262 (49%), Gaps = 6/262 (2%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
IDD + L + + Y P + T+ L+K + + A + +M+ +C P N
Sbjct: 458 IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNT 517
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + L A + K ++G +PN +YNI++ A G A L + M
Sbjct: 518 VITSLC-QKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG 576
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PD+ +Y ++ + + ++ A+DLL M++ G PDT++Y +L +CR+ A
Sbjct: 577 --TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRA 634
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++LCR++ G +PD YN ++LGFC+ R A M S+GC+P+ +Y L+
Sbjct: 635 IRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEA 694
Query: 351 LCDQGMFDVAKKYMQLMISKGF 372
L + + D AK+ + + S G
Sbjct: 695 LAYECLLDEAKQLLVNLCSLGV 716
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 3/242 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ L+ L + + +++ + P + F +I + L +A++T + M
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIM 538
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C P N +++ L+ + A L S +G P+ +YN ++ G
Sbjct: 539 AENGCIPNQSTYNIVVDALL-KAGKTQEALKLL-SGMTNGT-PDLITYNTVISNITKAGK 595
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L M G+ PD +YR L G+CR+ +RA+ +L + + G PD Y
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L C+ + A M GC PD Y ++ E +A ++L ++ S G
Sbjct: 656 ILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715
Query: 337 CL 338
L
Sbjct: 716 VL 717
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP L TY +I ++ + AL R M+ P R L + + A
Sbjct: 577 TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP-DTITYRSLAYGICREDGTDRAI 635
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G+ P+ YN ++ FC N IA F M G MPD +Y IL++ L
Sbjct: 636 RMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTL 272
+ ++ A LL ++ + G + +L
Sbjct: 696 AYECLLDEAKQLLVNLCSLGVLDKSL 721
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + AL G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 392 CKKGDVWKGSKLLKEM 407
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 6/337 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F+ I + T +S+ Y +F+ LI Y ES A++ +R E +
Sbjct: 52 FAAIXETXGTQRSDJY-----VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRK 106
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+LE L+ + Y + + ++ + G + +NI+M FC +GDI +A ++F+ + +
Sbjct: 107 VLEHLMKLK-YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 165
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V SY LM G R ++ L ML G PD +Y+ L+N LC++ K+ +A
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M VKG P+ V + T++ G C+ GR A ++ + M S P+L++Y TL+ G
Sbjct: 226 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G A + M KG P LI G C G +D A + +++
Sbjct: 286 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 345
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
E + + +C ++L E++ V +K D R
Sbjct: 346 EVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDAR 382
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ F T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 92 TREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A+ L+ M VKG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V + +L+E+ + G P
Sbjct: 391 FCKKGDVWKGSKLLKEMQRDGHVP 414
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYLR 183
V P ++TY LI + + D A + F ML K L L+ H +
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEML---VKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +++K + P+ +YN ++ C GD+ A+ L ++M +G+ PD +Y L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C++ ++ A + + M+ + D ++YT L + LC++ + +A K+L M G
Sbjct: 319 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
PD Y ++ FC++G K+L++M +G +P++V+
Sbjct: 379 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+++S+TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C+ G A ++ +M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ +++ E+
Sbjct: 392 CKKGDVWTGSKLMKEM 407
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ S+ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+ L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +++E+ + G P
Sbjct: 391 FCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 165/344 (47%), Gaps = 3/344 (0%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
I++ + G+ ++ IL T ++ + +F+ LI Y ES A++ +R E
Sbjct: 38 IVVSRKGKGSASAVFAAILETKGTQRSDIY--VFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ ++LE L+ + Y + + ++ + + G + +NI+M +FC G+I +
Sbjct: 96 KFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRL 154
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A ++F+ + + G+ P V S+ LM G + +N L M G PD +Y+ L+N
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC++ KL +A +L M G P+ V + T++ G C++GR A ++ + M S P
Sbjct: 215 GLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSP 274
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L++Y TL+ GLC G A+ + M KG P LI G C G ++ A
Sbjct: 275 DLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYR 334
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++K + + ++ +C ++L E++ V +K
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM C++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN VS+ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 INEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 9/221 (4%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYL 182
V P ++TY + I ES L D A + F ML+ P +++ H +
Sbjct: 202 VQPDVYTYSVLINGLCKESKLDD-ANELFDEMLDNGLVPNSVSFTTLID---GHCKDGRV 257
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A +++K + P+ +YN ++ C NGD+ A L N+M +G+ PD +Y L
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTL 317
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C++ + A + + M+ + D ++YT L++ LC++ + +A K+L M G
Sbjct: 318 IDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
P+I Y ++ FC++G K++++M +G +P++V+
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S C++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ +++NE+
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 182/388 (46%), Gaps = 19/388 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILK--LGRAKYFSLIDDIL-------ITLKS---- 123
LA + ++ +QPN ++ T++I L RA+ ++ L I L S
Sbjct: 34 LALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNSVFGA 93
Query: 124 --EHYPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
E YP+ P++F LI++ + + A++TF M P N +L LV
Sbjct: 94 LMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKE 153
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + + FK G+ P+ ++NI++ A C G A L KM E GV P +
Sbjct: 154 QK-VDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVT 212
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ C+K + A L++ M +KG D +Y +++LCR + + Y LL RM+
Sbjct: 213 YNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMR 272
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P+ + YNT++ GF REG+ A KV ++M LPN ++Y TL+ G C G
Sbjct: 273 RNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIG 332
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M +M+S G P+ AL+ G + +LE + G ++ ++
Sbjct: 333 EALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMI 392
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C +E+ ++L++++KV + D
Sbjct: 393 DGLCKNGMLEEAVQLLDDMLKVSVNPDV 420
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 3/304 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+ TY LI + + A K F M FN P N ++ T N + A
Sbjct: 276 VYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGN-IGEA 334
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L HG+ PN +Y ++ N + + ++ +M GV SY ++ G
Sbjct: 335 LRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDG 394
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + AV LL+DML PD ++++ L+N R K+ A +++C+M G P+
Sbjct: 395 LCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+T++ +C+ G +A M +G + + + LV C G + A+ +M
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P+ +I G+ N G +A V +++ G P T+ ++ +C G
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574
Query: 426 EMEK 429
+ +
Sbjct: 575 HINE 578
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ L K ++ V PN +YN ++ F G I +A +F++M ++P+ +Y L+
Sbjct: 264 GYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIA 323
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + A+ L++ M++ G P+ ++Y LLN L + + +L RM++ G
Sbjct: 324 GHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRV 383
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ Y ++ G C+ G +A ++L+DM P++V++ L+ G G + AK+ M
Sbjct: 384 SHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIM 443
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P+ + LI +C +G + EA + +G T ++V C
Sbjct: 444 CKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRY 503
Query: 425 EEMEKLGEVLNEIVKV 440
++E+ +N + ++
Sbjct: 504 GKLEEAEYFMNHMSRM 519
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 154/334 (46%), Gaps = 4/334 (1%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
++I + R S ++DIL T+KS++ + + L+ YA+ + R ++ M+
Sbjct: 706 VIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRH 765
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P + ++ +++ A + + G + + ++N+++ FC ++
Sbjct: 766 GFLPDKFSWHSLILGYCQSKSF-DVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKK 824
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ L +M + V+P+V++Y L GL R S ++A +L+ +L G VP Y TL+N
Sbjct: 825 AFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLIN 884
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+CR ++ A KL MK G + V + +V G + +A VL+ M +P
Sbjct: 885 GMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIP 944
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ ++ TL+ C + A + +M + LI G C G ++ A +
Sbjct: 945 TVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGE---EMEKL 430
EE+ + P+ +++++ CAG E EKL
Sbjct: 1005 EEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKL 1038
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 142/318 (44%), Gaps = 1/318 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
P+++T L+ + AL F ML + +P N I++ + + D+
Sbjct: 665 NPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQ-YSRKGKTSKVNDI 723
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ + N +YNI++ + ++ + L+ M G +PD S+ L+ G C+
Sbjct: 724 LSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQ 783
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ A+ +L + +G V D ++ L+ C + ++++A++L+ +M P++
Sbjct: 784 SKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN + G R A +VL+ + +G +P Y TL+ G+C G A K M
Sbjct: 844 YNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMK 903
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ G S H A+++G N K++ A VL+ +L+ P T+ ++ C +
Sbjct: 904 TLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVA 963
Query: 429 KLGEVLNEIVKVEIKGDT 446
K E+ + + +K D
Sbjct: 964 KALELRSIMEHCHVKLDV 981
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 1/280 (0%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P P +++ L+ H + R A +F+ V P+T ++N+++ + G S
Sbjct: 664 PNPAVYTSLVDGLLKH-GHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVND 722
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ + M + + ++ +Y IL+ G ++ + R L +DM+ GF+PD S+ +L+ C
Sbjct: 723 ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYC 782
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+ K A K+L + ++G D +N ++ FC A ++++ M +PN+
Sbjct: 783 QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD 842
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y L GL F A + +Q+++ G P LI G C VG + A + +E+
Sbjct: 843 TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEM 902
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
G + H IV + +++E VL+ +++++I
Sbjct: 903 KTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQI 942
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
YL+ A + + + G + + + N+++ FC G + A N M G+ P+ ++
Sbjct: 470 YLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFD 529
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ G +A + + M + G P +Y LL LC + EA K R++
Sbjct: 530 CIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCI 589
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
D V +NT + CR G DA ++ +M +N LP+ +Y L+ GLC +G A
Sbjct: 590 PNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAA 649
Query: 361 KKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
I KG SP+ +V +L+ G G A + EE+L P + +I+
Sbjct: 650 LLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIID 709
Query: 420 QICAGEEMEKLGEVLNEI 437
Q + K+ ++L+ +
Sbjct: 710 QYSRKGKTSKVNDILSTM 727
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L K V P+ ++++++ F G I+ A + KM++ G++P+ Y
Sbjct: 401 LEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST 460
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C+ + A++ M + G V D + L+ + CR KL EA + M G
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG 520
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+P+ V ++ ++ G+ G A+ A V + M S G P+L +Y L+ GLC G + A
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEAL 580
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+ + + + + + C G + +A ++ E++ P T+ ++ +
Sbjct: 581 KFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGL 640
Query: 422 C 422
C
Sbjct: 641 C 641
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 36/267 (13%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
LIL ++K F + IL + E + + F LI + E N +A + + M +F
Sbjct: 777 LILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFM 836
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P N + L+ ++ A + + + G +P K Y ++ C G+I A
Sbjct: 837 VIPNVDTYNALFNGLIRTSDF-HKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGA 895
Query: 221 YTL-----------------------------------FNKMFERGVMPDVESYRILMQG 245
L + M E ++P V ++ LM
Sbjct: 896 MKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHV 955
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+++ V +A++L M + D ++Y L++ LC + A+KL MK + P+
Sbjct: 956 YCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPN 1015
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDM 332
Y ++ FC I++ K+L D+
Sbjct: 1016 TSIYIVLIDSFCAGNYQIESEKLLRDI 1042
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 7/175 (4%)
Query: 94 SNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
+N Y+ LI ++G K + D + TL + V S +++ A S + A+
Sbjct: 875 TNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSA---IVRGLANSKKIENAI 931
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
MLE P ++ + N + A +L V + +YN+++
Sbjct: 932 WVLDLMLEMQIIPTVATFTTLMHVYCKEAN-VAKALELRSIMEHCHVKLDVVAYNVLISG 990
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
C NGDI A+ L+ +M +R + P+ Y +L+ C + + LL D+ ++
Sbjct: 991 LCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 165/312 (52%), Gaps = 10/312 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L +A+ S D+L + + P +FTY LI + +S D AL+ F
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 113
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCF 213
++ +P + +++ L L+ A DLF K G +PNT +YN ++ FC
Sbjct: 114 QLVARGFRPDVVTYSCLIDGLCKE-GRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A L +M E G PDV +Y LM G C+ ++++ A DLL M KG P+ ++
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDM 332
+T+L++ LCR+ +L +A +L M+ K C+P + YNT++ G+CR + +A K +LE+M
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
C PN+VS+ ++ GLC A + ++ + +P + +I C KV
Sbjct: 293 ---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349
Query: 393 DEACGVLEELLK 404
DEAC V ++L+
Sbjct: 350 DEACRVYRKMLE 361
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 126/233 (54%), Gaps = 1/233 (0%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P +YN ++ C S AY L +M G +PD+ +Y L+ G C+ + + A+
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGF 316
+ E ++ +GF PD ++Y+ L++ LC++ +L+EA L RM K C P+ V YN+++ GF
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
CR G+ +A +LE M G P++V+Y TL+ G C D A + M KG +P+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+L+ G C ++ +A +L E+ + +P T+ I+ C ++E+
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEE 283
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 135/256 (52%), Gaps = 3/256 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILM 243
A +F+ G P+ +Y+ ++ C G + A LF +M + G MP+ +Y L+
Sbjct: 108 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 167
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G CR +++ A++LLE M G PD ++YTTL+N C+ +L +AY LL +M KG
Sbjct: 168 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 227
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V + +++ G CRE R DA +L +M C P + +Y T++ G C + A+K+
Sbjct: 228 PNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M + P+ + +I+G C V + EA ++EE + P + ++ +C
Sbjct: 288 M--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCR 345
Query: 424 GEEMEKLGEVLNEIVK 439
+++++ V ++++
Sbjct: 346 EKKVDEACRVYRKMLE 361
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 113/206 (54%), Gaps = 1/206 (0%)
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
+P +Y L+ GLC+ + + A DLLE+M+ G +PD +YTTL+ C+ KK +A +
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGL 351
+ ++ +G PD+V Y+ ++ G C+EGR +A + M +G C+PN V+Y +L+ G
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G D A ++ M G SP L+ GFC + ++D+A +L ++ + G P+
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEI 437
T+ ++ +C + +L E+
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEM 256
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VP ++Y +L++ LC+ ++ EAY LL M GC PDI Y T++ GFC+ ++ DA +
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS-PHFSVSHALIKGF 386
V E + + G P++V+Y L+ GLC +G A MI G P+ ++LI GF
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C +GK+DEA +LE + + G +P T+ ++ C ++ ++LN++ + KG T
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR---KGLT 227
Query: 447 RIVEAGIGLEDYLIGKTR 464
V L D L + R
Sbjct: 228 PNVVTFTSLMDGLCRENR 245
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 148/303 (48%), Gaps = 3/303 (0%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P++ TY LI + L + AL F M P N +++ L R
Sbjct: 225 KMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFR 284
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ + A L ++PN ++N+++ A C G +S A +F M E GV PDV +Y
Sbjct: 285 RW-KEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTY 343
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM G + ++ A L + M+ KG PD SY L+ C+ K++ EA +L M
Sbjct: 344 SSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIH 403
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD V+YNT++ G C+ GR +A + ++M SNG LP+L +Y L+ G C +G
Sbjct: 404 QGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGK 463
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + ++M S P ++ + LI C G + +A + EL G P+ + I+
Sbjct: 464 AFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIIN 523
Query: 420 QIC 422
+C
Sbjct: 524 NLC 526
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 9/355 (2%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAE 142
A QPN TY ILI L + K + DI +K++ ++P +FTY LI+
Sbjct: 229 AGCQPNV----VTYNILIDSLCKDKLVNEALDIFSYMKAKR--ISPDIFTYNSLIQGLCN 282
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
A M N P N +++ + + A +FK+ + GV P+
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDA-ICKEGKVSEAQGVFKTMTEMGVEPDVV 341
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y+ +M + +I A LF+ M +G PD SY IL++G C+ +++ A L +M
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+++G PD ++Y TL++ LC+ +LREA L M G PD+ Y+ ++ GFC+EG
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A ++ M S P++ Y L+ +C G A+K + +G P+ + +
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I C G +DEA + G P E ++ +I+ ++ + +++ E+
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 7/323 (2%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEF 159
I+K+G +Y+ + I ++ + E ++P ++T I I S+L D A F M++
Sbjct: 104 IVKMG--QYYGAV--ISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKL 159
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+P N ++ L + + A + F G P +Y ++ C G+ +
Sbjct: 160 GLQPDAVTFNTLINGLCKVGKFAQ-AVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTA 218
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF KM E G P+V +Y IL+ LC+ VN A+D+ M K PD +Y +L+
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC ++ +EA LL M P+I +N +V C+EG+ +A V + M G P
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y +L+ G + A+K MI+KG P + LIKG+C ++DEA +
Sbjct: 339 DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLF 398
Query: 400 EELLKAGEAPHEDTWVMIVPQIC 422
E++ G P + ++ +C
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLC 421
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 130/268 (48%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL +F ML P Q ++L +V Y L K G+ P+ + +I
Sbjct: 76 DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ F + +A+++F+KM + G+ PD ++ L+ GLC+ + +AV+ +D G
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P +YTT++N LC+ + A L +M+ GC P++V YN ++ C++ +A
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ M + P++ +Y +L+ GLC+ + A + M S P+ + L+
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C GKV EA GV + + + G P T+
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGVEPDVVTY 343
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 125/239 (52%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LFK + G PN +YNI++ + C + ++ A +F+ M + + PD+ +Y L+
Sbjct: 218 AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
QGLC + A LL +M + +P+ ++ L++++C++ K+ EA + M G
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+V Y++++ G+ ++A K+ + M + GC P+ SY L+ G C D AK+
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQL 397
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
MI +G +P + LI G C +G++ EA + + + G P T+ M++ C
Sbjct: 398 FNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFC 456
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 5/291 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++FT+ L+ + A F++M E +P + ++ + R + A
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM-YGYSLRMEIVEA 359
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF + G P+ SYNI+++ +C I A LFN+M +G+ PD +Y L+ G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A DL ++M + G +PD +Y+ LL+ C++ L +A++L M+ PD
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ C+ G DA K+ ++ G LPN+ Y T++ LC +G+ D A + +
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED--TW 414
M G P + +I+GF A ++ E+ G TW
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTTW 590
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 128/262 (48%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+H + AF +F K G+ P+ ++N ++ C G + A F+ G P V
Sbjct: 141 SHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTV 200
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y ++ GLC+ + A L + M G P+ ++Y L++SLC+ K + EA +
Sbjct: 201 YTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSY 260
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
MK K +PDI YN+++ G C R +A +L +M S +PN+ ++ LV +C +G
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A+ + M G P +L+ G+ ++ EA + + ++ G P ++ +
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380
Query: 417 IVPQICAGEEMEKLGEVLNEIV 438
++ C + +++ ++ NE++
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMI 402
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+L +M G+ PD+ + IL+ +V+ A + M+ G PD +++ TL+N L
Sbjct: 116 SLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGL 175
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ K +A + + GC P + Y T++ G C+ G A + + M GC PN+
Sbjct: 176 CKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNV 235
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y L+ LC + + A M +K SP ++LI+G CN + EA +L E
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ P+ T+ ++V IC ++ + V + ++ ++ D
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDV 340
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV-DLLEDMLNKGFVPDTLSY 274
+I A FN M R +P + + L+ + + Q AV L + M G PD +
Sbjct: 74 NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL 133
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+ L++ +++ A+ + +M G PD V +NT++ G C+ G+ A + +D +
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEA 193
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+GC P + +Y T++ GLC G A + M G P+ + LI C V+E
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNE 253
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
A + + +P T+ ++ +C ++ +LNE+ + I
Sbjct: 254 ALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNI 301
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 139 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSV 198
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 199 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAF 318
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 319 EHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 378
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 379 CKXGDVWXGSKLLKEM 394
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 152/316 (48%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 55 VFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 113
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGD 173
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 174 LDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M KG
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 293
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ E + ++ C
Sbjct: 294 LKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAE 353
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V +K D R
Sbjct: 354 KMLREMLSVGLKPDAR 369
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 98 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L GV P+ +Y++++ C + A LF
Sbjct: 158 VVSYNTLMNGYIRXGD-LDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELF 216
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 217 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 276
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M VKG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 277 GDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 336
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ G C +G A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 337 TALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQR 396
Query: 405 AGEAP 409
G P
Sbjct: 397 DGHVP 401
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D ML +P + ++ L +
Sbjct: 152 WGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESK-MD 210
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 211 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 270
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD ++YTTL+N C++ L A++ RM +
Sbjct: 271 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIR 330
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C G K
Sbjct: 331 LDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKL 390
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 391 LKEMQRDGHVPSVVTYNVLMNG 412
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 3/292 (1%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A++ FR M E P N ++ L L L G P +Y +
Sbjct: 109 EAMEIFREMEEKGSAPDSFTYNILINGLCKDAQ-LEMGVSLMDEMQARGFSPTVVTYTTL 167
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG- 266
+ FC G + A + ++M RG+ P+ +Y L+QGLC +V RA+ +L++M +G
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGN 227
Query: 267 -FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P+ ++YT L++ LC+K + L M + GC P+ Y ++ G C++G ++A
Sbjct: 228 ECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEA 287
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+L +M + GC ++V Y +L+ GLC G D A++ LM+ KG +P +LI+G
Sbjct: 288 AVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQG 347
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C+ G +DEA G+++E+ G P+ T+ ++ + + +++NE+
Sbjct: 348 LCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEM 399
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 2/206 (0%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY+ + C G I+ A +F +M E+G PD +Y IL+ GLC+ +Q+ V L+++M
Sbjct: 93 SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+GF P ++YTTL++ C ++ A +L M+ +G P+ V Y ++ G C G
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212
Query: 323 IDACKVLEDMP--SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A VL++M N C PN+V+Y L+ GLC +G+F++ +++ MI G P+ +
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAG 406
ALI G C G EA +L E++ G
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIG 298
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRIL 242
A D+ G+ PNT +Y +++ C G++ A + +M RG P+V +Y L
Sbjct: 180 AMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQL 239
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+K ++ L++M+ G P+ +YT L++ LC+K EA LL M GC
Sbjct: 240 IHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGC 299
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D+V YN+++ G C+ G A ++ M G P++ +Y +L+ GLCD G+ D A
Sbjct: 300 ELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALG 359
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
MQ M +KG P+ LI GF + D A ++ E+ G P D +
Sbjct: 360 LMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIY 411
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV SY + GLC+K Q+ A+++ +M KG PD+ +Y L+N LC+ +L L+
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ +G +P +V Y T++ GFC GR A +L++M G PN V+Y L+ GLCD
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 355 GMFDVAKKYMQLMISKGFS--PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G + A ++ M +G P+ LI G C G + L+E++ +G P+
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
T+ ++ +C + +LNE+V + + D I
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVI 305
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
F + TY LI A DIL + EH +TP+ TY LI+ + +R
Sbjct: 157 FSPTVVTYTTLIHGFCTAGRVDAAMDILDEM--EHRGITPNTVTYTALIQGLCDCGEVER 214
Query: 149 ALKTFRSM-LEFN-CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
A+ + M L N C P +++ L + + G PN +Y
Sbjct: 215 AILVLKEMKLRGNECCPNVVTYTQLIHGLC-QKGLFEMGMEFLDEMIISGCFPNNATYTA 273
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C G A L N+M G DV Y L+ GLC+ +++ A ++ M+ KG
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD +YT+L+ LC L EA L+ M+ KG P+ V Y T++ GF + R A
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGL 351
+++ +M SNG +P Y+ L L
Sbjct: 394 QLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 3/292 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI L + + ++ +++ + T +T LI + + D A+ M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCFN 214
P +++ L R A + K G PN +Y ++ C
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVER-AILVLKEMKLRGNECCPNVVTYTQLIHGLCQK 246
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + ++M G P+ +Y L+ GLC+K A LL +M+ G D + Y
Sbjct: 247 GLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIY 306
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+L++ LC+ +L A ++ M KG PD+ Y +++ G C G +A ++++M +
Sbjct: 307 NSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRA 366
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
G +PN V+Y TL+ G D A + + M S G P + L K
Sbjct: 367 KGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%)
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ D++ Y+ + G C++G+ +A ++ +M G P+ +Y L+ GLC ++
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M M ++GFSP LI GFC G+VD A +L+E+ G P+ T+ ++ +C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 423 AGEEMEKLGEVLNEI 437
E+E+ VL E+
Sbjct: 208 DCGEVERAILVLKEM 222
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 147 DRALKTFRSMLEFNCKPLP--KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D AL +F ML KPLP Q N++L +V R Y L K G+ PNT +
Sbjct: 72 DDALASFNHMLHR--KPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI++ FC + + +++ K+ + G+ P + ++ L+ GLC+ + +A++L +DM+
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G PD +YTT++N LC+ + A L+ +M GC PD+V Y+T++ C++ +
Sbjct: 190 RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNE 249
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M + G P +VSY +L+ GLC + A + M S P LI
Sbjct: 250 ALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLID 309
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
FC G V EA GVL+ + + G P+ T+
Sbjct: 310 IFCKEGNVLEAQGVLKTMTEMGVEPNVITY 339
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L + + + DI +K++ T +T LI+ + A M
Sbjct: 233 TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEM 292
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
N P + ++++ N L A + K+ + GV PN +YN +M + +
Sbjct: 293 TSLNIMPDIVTFSLLIDIFCKEGNVLE-AQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A LF+ M RG PDV SY IL+ G C +++ A L +M+++G P+T+SYTT
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+++ C+ KLREA +L M G PD+ Y+ ++ GFC++G A ++ M
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PNLV Y L+ +C G + A+K + G P + +I G C G +DEA
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531
Query: 397 GVLEELLKAGEAPHEDTWVMIV 418
++ + G P+E ++ +I+
Sbjct: 532 EAFRKMEEDGCPPNEFSYNVII 553
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 1/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI ++ +AL+ F M+ C+P I+ L A L K
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA-GLIKKM 222
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G P+ +Y+ ++ + C + ++ A +F+ M +G+ P V SY L+QGLC S+
Sbjct: 223 GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW 282
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +M + +PD ++++ L++ C++ + EA +L M G P+++ YN++
Sbjct: 283 KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ + ++A K+ + M + GC P++ SY L+ G C D AK+ MI +G
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P+ LI FC +GK+ EA + +++ G P T+ +++ C
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 162/358 (45%), Gaps = 13/358 (3%)
Query: 97 TYLILILKLGRAKYFS----LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
T+ LI L +A F+ L DD++ P ++TY I + + A
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVAR------GCQPDVYTYTTIINGLCKMGETAAAA 216
Query: 153 --FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M E C+P + +++ L R + A D+F G+ P SY +++
Sbjct: 217 GLIKKMGEVGCQPDVVTYSTLIDSLCKDR-LVNEALDIFSYMKAKGISPTVVSYTSLIQG 275
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A + N+M +MPD+ ++ +L+ C++ V A +L+ M G P+
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y +L++ + ++ EA KL M +GC PD+ Y+ ++ G+C R +A ++
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G PN VSY TL+ C G A++ + M + G+ P L++GFC G
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +A + + P+ + +++ +C + ++ +E+ ++ D +I
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQI 513
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ Y+ A K F M+ CKP + ++ + + A
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR-IDEA 390
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF G+ PNT SY ++ AFC G + A LF M G +PD+ +Y +L++G
Sbjct: 391 KQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEG 450
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + +A L M P+ + YT L++S+C+ L A KL + V G PD
Sbjct: 451 FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y T++ G C+EG +A + M +GC PN SY ++ G A + +
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 570
Query: 366 LMISKGF 372
M KGF
Sbjct: 571 EMRDKGF 577
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 1/231 (0%)
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV-DLLEDMLNKGFVPDTLSY 274
+I A FN M R +P + + L+ + R Q AV L + M G P+T +
Sbjct: 70 NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+N C + + + +L ++ G P I+ + T++ G C+ G A ++ +DM +
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC P++ +Y T++ GLC G A ++ M G P LI C V+E
Sbjct: 190 RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNE 249
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A + + G +P ++ ++ +C+ ++ +LNE+ + I D
Sbjct: 250 ALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 7/329 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTF 153
TY I+I L + L +L L ++ P++ TY I I A E + + A+K
Sbjct: 184 TYNIMIGSLCNRRKLGLALTVLDQLLLDN--CMPTVITYTILIEATIVEGGI-NEAMKLL 240
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML P N I+ + R A +L S G P+ SYNI++RAF
Sbjct: 241 EEMLARGLLPDMYTYNAIIRGMCKEGMVERAA-ELITSLTSKGCEPDVISYNILLRAFLN 299
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G L +MF RG P+ +Y IL+ LCR +++ A+ +L+ M+ K PDT S
Sbjct: 300 QGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 359
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+++LC++ +L A ++ M GC PDIV+YNT++ C+ G A A ++ +
Sbjct: 360 YDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 419
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC PN+ SY T++ L G A + MISKG P ++LI C G V+
Sbjct: 420 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVE 479
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
EA G+L+++ ++G P ++ +++ +C
Sbjct: 480 EAIGLLDDMEQSGFRPTVISYNIVLLGLC 508
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 18/296 (6%)
Query: 159 FNCKPLPKQLNRILELLVTHR-----------------NYLRPAFDLFKSAHKHGVLPNT 201
FN K + K +R++E+L +H N + A + G LP+
Sbjct: 124 FNFKNIEKA-SRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDI 182
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+YNIM+ + C + +A T+ +++ MP V +Y IL++ + +N A+ LLE+
Sbjct: 183 VTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 242
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML +G +PD +Y ++ +C++ + A +L+ + KGC PD++ YN ++ F +G+
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ K++ +M S GC PN V+Y L+ LC G D A +++MI K +P
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI C G++D A G+++ ++ G P + I+ +C + E+ N++
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 161/316 (50%), Gaps = 5/316 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY +I+ + + +RA + S+ C+P N +L + +
Sbjct: 250 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKW-DEGEK 308
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G PN +Y+I++ + C G I A ++ M E+ + PD SY L+ LC
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 368
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ A+ +++ M++ G +PD ++Y T+L +LC+ +A ++ +++ GC P++
Sbjct: 369 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 428
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G A ++ M S G P+ ++Y +L+ LC G+ + A + M
Sbjct: 429 SYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDM 488
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEE 426
GF P + ++ G C V ++D+A G+ E+++ G P+E T+++++ I AG
Sbjct: 489 EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWR 548
Query: 427 MEKLGEVLNEIVKVEI 442
E + E+ N + ++
Sbjct: 549 TEAM-ELANSLFSRDV 563
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 3/310 (0%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I I + N AL +L NC P ++E + + A
Sbjct: 180 PDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG-INEAMK 238
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+LP+ +YN ++R C G + A L + +G PDV SY IL++
Sbjct: 239 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFL 298
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + + L+ +M ++G P+ ++Y+ L++SLCR ++ EA +L M K PD
Sbjct: 299 NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 358
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ C+EGR A +++ M SNGCLP++V+Y T++ LC G + A + +
Sbjct: 359 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ S + +I + G A G++ ++ G P E T+ ++ +C +
Sbjct: 419 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLV 478
Query: 428 EKLGEVLNEI 437
E+ +L+++
Sbjct: 479 EEAIGLLDDM 488
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 132/248 (53%), Gaps = 13/248 (5%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ E PDV +Y ++ G C+ +Q+ A +L M +GF+PD ++Y ++ SLC ++
Sbjct: 137 EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
KL A +L ++ + C P ++ Y ++ EG +A K+LE+M + G LP++ +Y
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
++ G+C +GM + A + + + SKG P + L++ F N GK DE ++ E+
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI-------------VEAG 452
G P++ T+ +++ +C +++ VL +++ E+ DT ++
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 453 IGLEDYLI 460
IG+ DY+I
Sbjct: 377 IGIMDYMI 384
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G F+ + +++ +++KG++P + LIKGF N +++A V+ E+L++ P
Sbjct: 89 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 147
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ C ++E +VLN +
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRM 173
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 130 PSLFTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ +Y I A + DR AL +M+ P N ++ L + A
Sbjct: 425 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC-RDGLVEEAIG 483
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P SYNI++ C I A +F +M E+G P+ +Y +L++G+
Sbjct: 484 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 543
Query: 248 RKSQVNRAVDLLEDMLNKGFV 268
A++L + ++ +
Sbjct: 544 FAGWRTEAMELANSLFSRDVI 564
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 161/314 (51%), Gaps = 3/314 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + T+ LI + D A+ SM KP N +L+ L HR + + A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK-A 246
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F++ + V P+ +S+NI++ FC G++ A + +M R V PDV S+ L+
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R+ +++ A L +M G VPD + YT ++ CR + EA ++ M GC PD
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ G C++ R +DA K+L +M G P+L ++ TL+ G C QG F+ A +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ + P ++LI G C G + +A + +++ P+ T+ +++ C
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486
Query: 426 EMEKLGEVLNEIVK 439
++E L+E+VK
Sbjct: 487 QVEDAFGFLDEMVK 500
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 166/337 (49%), Gaps = 2/337 (0%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
L+L++ R + S + + L S P P +F LI+ Y +S P A + FR +L+
Sbjct: 59 LLLRMSRRRGASRREIVSSLLASSPTP-QPQVFDLLIRTYTQSRKPREAFEAFRLLLDHR 117
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P+P + L +++ + A + ++ N + NIM+ ++C + A
Sbjct: 118 V-PVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGA 176
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
T+ ++M +R V PDV ++ +L+ R V+ A+ L++ M N+G P ++Y ++L
Sbjct: 177 DTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKG 236
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC+ ++ +A ++ M PD+ +N ++ GFCR G +A K ++M P+
Sbjct: 237 LCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPD 296
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+VS+ L+G +G D A Y++ M G P + +I GFC G + EA V +
Sbjct: 297 VVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRD 356
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
E++ G P T+ ++ +C + ++LNE+
Sbjct: 357 EMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 130/258 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L S G+ P +YN +++ C + A +F M + V PDV S+ IL+
Sbjct: 211 AIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR +V AV ++M ++ PD +S++ L+ R+ ++ A L MK G P
Sbjct: 271 GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y V+ GFCR G +A +V ++M GCLP++V+Y TL+ GLC Q A+K +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G +P LI G+C G + A + + LL+ P T+ ++ +C
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450
Query: 425 EEMEKLGEVLNEIVKVEI 442
++ K E+ +++ EI
Sbjct: 451 GDLAKANELWDDMHAREI 468
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 168/352 (47%), Gaps = 5/352 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFR 154
TY ++ L + + F ++ T+ + V P + F LI + A+K ++
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTM--DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M P + ++ L + R + A + G++P+ Y +++ FC
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLF-SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G +S A + ++M G +PDV +Y L+ GLC++ ++ A LL +M +G PD ++
Sbjct: 346 GSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF 405
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TTL++ CR+ A +L + + PD+V YN+++ G CR+G A ++ +DM +
Sbjct: 406 TTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHA 465
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
LPN ++Y L+ C++G + A ++ M+ KG P+ +++IKG+C G V +
Sbjct: 466 REILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKK 525
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
L+++ + P T+ ++ E M V N + K ++ D
Sbjct: 526 GQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDA 577
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 2/294 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T +I + + AL+ M+ F C P N +L L L A L
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL-DAEKLLNE 392
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ +C G+ A LF+ + + + PDV +Y L+ G+CRK
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A +L +DM + +P+ ++Y+ L++S C K ++ +A+ L M KG P+I YN+
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G + L+ M + P+L+++ TL+ G + A +M +
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-MIVPQICAG 424
P + +I GF G + +A V + + +G P T++ +I + AG
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 3/271 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K L+D + + E VTP L FT LI Y + AL+ F ++L +P
Sbjct: 376 GLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N +++ + + L A +L+ H +LPN +Y+I++ + C G + A+
Sbjct: 436 DVVTYNSLIDGMC-RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGF 494
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++M ++G +P++ +Y +++G CR V + L+ M PD +++ TL++ +
Sbjct: 495 LDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIK 554
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ + A+ + M+ + PD V YN ++ GF +G DA +V + M +G P+ +
Sbjct: 555 EENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYT 614
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
Y +L+ G G A + MI +GF+P
Sbjct: 615 YMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 164/377 (43%), Gaps = 20/377 (5%)
Query: 78 AKEIF---DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL-- 132
AKE+F D S P+ R N IL G + + + + + +H VTP +
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFN------ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVS 299
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDL 188
F+ LI +++ D A R M P + ++ +V + A +
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVP-----DGVIYTMVIGGFCRAGSMSEALRV 354
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G LP+ +YN ++ C + A L N+M ERGV PD+ ++ L+ G CR
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ A+ L + +L + PD ++Y +L++ +CRK L +A +L M + P+ +
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+ ++ C +G+ DA L++M G LPN+ +Y +++ G C G ++++Q M
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
P + LI G+ + A V + K P T+ MI+ M+
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 429 KLGEVLNEIVKVEIKGD 445
G V + I+ D
Sbjct: 595 DAGRVFKGMGDSGIEPD 611
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + + + P+ +YN ++ C GD++ A L++ M R ++P+ +Y IL+
Sbjct: 421 ALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILID 480
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C K QV A L++M+ KG +P+ +Y +++ CR +++ + L +M+ P
Sbjct: 481 SHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFP 540
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ +NT++ G+ +E A V M P+ V+Y ++ G +QG A +
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVF 600
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+ M G P +LI G G +A + +E++ G AP +
Sbjct: 601 KGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P + +++++R + + A+ F + + V + L+ L R + A +
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+L+ + + +++S C+ + A ++ M+ + PD+V +N ++ R
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G A +++ M + G P +V+Y +++ GLC FD AK+ + M +P
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI GFC VG+V EA +E+ P ++ ++ EM+ G L E+
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 439 KVEIKGDTRIVEAGIG 454
+ + D I IG
Sbjct: 325 GLGLVPDGVIYTMVIG 340
>gi|296089005|emb|CBI38708.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 194/439 (44%), Gaps = 78/439 (17%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P ++ ++I +Q +PL A +IF+ A S+ PN+RH+ Y +I LG + + + +++
Sbjct: 11 PTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRIAEMREVIDQ 70
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH-- 178
+K + S+F+ ++K YA + + D A+ F+++ +FNC N +L +LV
Sbjct: 71 MKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTLLRILVKESK 130
Query: 179 -----RNYLRP----------------------------AFDLFKSAHKHGVLPNTKSYN 205
R +L A +F+ P+ +SY
Sbjct: 131 LETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQCCSPDKESYR 190
Query: 206 IMMRAFCFNGDISIA----YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
I+MR C +G ++ A Y++F ++ ++G D+ +YR L+ LC V A+++L
Sbjct: 191 ILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHVEEALEILGK 250
Query: 262 MLNKGF------------------------------------VPDTLSYTTLLNSLCRKK 285
+L KG VP SY+ + L ++
Sbjct: 251 VLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYSAMAIDLYSER 310
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSY 344
K+ EA ++L M+ +G P + Y + CR A A LE M GC+ + +Y
Sbjct: 311 KIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRWKSAF-AVGYLEKMARQVGCVADKETY 369
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LV GLC G F A ++ M+ + SP + LI+G C +G+ +A LEE++
Sbjct: 370 SILVDGLCCDGRFVEASGILERMLIRSSSPGVETYNTLIRGLCLMGRQYDAVIWLEEMVV 429
Query: 405 AGEAPHEDTWVMIVPQICA 423
G+ P W +V +C+
Sbjct: 430 QGKLPAVSVWDSLVASVCS 448
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 167/345 (48%), Gaps = 22/345 (6%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + A++ SM++ NC+P N I++ L R + AF+
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ-VTEAFN 222
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +YN ++ A C + TL N+M + +MPDV S+ ++ LC
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V A D+++ M+ +G P+ ++YT L++ C ++ EA K+ M KGC P+++
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342
Query: 308 HYNTVVLGFC---REGRAI----------------DACKVLEDMPSNGCLPNLVSYRTLV 348
YNT++ G+C R +AI +A KV + M GC+PN++SY TL+
Sbjct: 343 SYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLI 402
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C D A M + P LI G C+V ++ +A + E++ +
Sbjct: 403 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 462
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
P+ T+ +++ +C + + +L I + D ++ I
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 507
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 131/252 (51%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N + AF + K G P+T ++ ++R C G I A LF+KM G PDV
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVV 167
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLC+ + A+ LL M+ K P+ +Y T+++SLC+ +++ EA+ L M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
KG +PDI YN+++ C +L +M + +P++VS+ T+V LC +G
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + MI +G P+ AL+ G C + ++DEA V + ++ G P+ ++ +
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347
Query: 418 VPQICAGEEMEK 429
+ C + ++K
Sbjct: 348 INGYCKIQRIDK 359
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D A+ +F ML P N++L + +++ L G+ PN +
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHH-STLLSLSHQMDSFGIPPNIYT 98
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+I++ +FC + A+++ K+ + G PD ++ L++G+C + ++ A+ L + M+
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+GF PD ++Y TL+N LC+ A +LL M K C P++ YNT++ C++ +
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A + +M + G P++ +Y +L+ LC+ + + M+ P + ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
C GKV EA V++++++ G P+ T+ ++ C EM++ +V + +V
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 22/331 (6%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P +FTY I+A NL + M++ P N +++ L + A
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK-EGKVTEA 290
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ + GV PN +Y +M C ++ A +F+ M +G MP+V SY L+ G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 246 LCRKSQVNRA-------------------VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
C+ ++++A V + + M+ KG +P+ +SY TL+N C+ ++
Sbjct: 351 YCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 410
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ +A L M + PD V Y+T++ G C R DA + +M + +PNLV+YR
Sbjct: 411 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 470
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ LC A ++ + P V++ I G C G+++ A + L G
Sbjct: 471 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 530
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P T+ +++ +C +++ ++ E+
Sbjct: 531 LQPDVWTYSIMINGLCRRGLLDEASKLFREM 561
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 148/327 (45%), Gaps = 20/327 (6%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILE------------ 173
V P++ TY + L D A+K F +M+ C P N ++
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361
Query: 174 ----LLVTHRNYLR--PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
L+ YL A +F + G +PN SYN ++ +C I A LF +M
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 421
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ ++PD +Y L+ GLC ++ A+ L +M+ +P+ ++Y LL+ LC+ + L
Sbjct: 422 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 481
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA LL ++ +PDI N + G CR G A + ++ S G P++ +Y +
Sbjct: 482 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 541
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ GLC +G+ D A K + M G + + + + + +GF + A +L+E++ G
Sbjct: 542 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 601
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVL 434
+ T + V + + L ++L
Sbjct: 602 SADASTMTLFVKMLSDDGLDQSLKQIL 628
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N + A F + P+T +N ++ + S +L ++M G+ P++
Sbjct: 38 HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY 97
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ IL+ C ++V A +L +L G PDT ++TTL+ +C + K+ EA L +M
Sbjct: 98 TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKM 157
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD+V Y T++ G C+ G A ++L M C PN+ +Y T++ LC
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A M++KG SP ++LI CN+ + +L E++ + P ++ +
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 418 VPQICAGEEMEKLGEVLNEIVK 439
V +C ++ + +V++++++
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQ 299
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 3/238 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ +Y LI Y + D+A+ F M P + ++ L H L+ A
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC-HVERLQDAIA 451
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF +PN +Y I++ C N ++ A L + + PD++ I + G+C
Sbjct: 452 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 511
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A DL ++ +KG PD +Y+ ++N LCR+ L EA KL M GC +
Sbjct: 512 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 571
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YNT+ GF R A ++L++M + G + + V L D G+ K+ ++
Sbjct: 572 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A + FN+M P + L+ + + + + L M + G P+ +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+NS C ++ A+ +L ++ G PD + T++ G C EG+ +A + + M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P++V+Y TL+ GLC G A + + M+ K P+ + +I C +V EA
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ E++ G +P T+ ++ +C E + + +LNE+V +I D
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 129/242 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +YN +MR C + + A +M +G +PD +Y ++ G C+ + A
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+LL+D + KGFVPD ++Y +L+N LC + + A +L + K PD+V YN++V G
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
CR+G + A +V+ +M GC P++ +Y ++ GLC G A M I KG+ P
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ LI G+C K+D A ++E + G AP T+ ++ +C + +++ E E
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515
Query: 437 IV 438
++
Sbjct: 516 MI 517
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 135/261 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF A + P+ YN +++ C G I A + N+M E G PD+ +Y I++
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ A ++ D + KG++PD ++ TL++ C++ KL A +L+ RM G P
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YN+V+ G C+ G+A + + E+M GC PN ++Y L+ C + A +
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P + LI GFC G +D A + ++L + G + DT+ +++ +
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 608
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
M+ ++ E++ K D
Sbjct: 609 LNMQMAEKIFGEMISKGYKPD 629
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 169/350 (48%), Gaps = 3/350 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVT-PSLFTYLIKIYAESNLPDRALKTFRS 155
Y LI +L A +D L + +S P + L+ I+ YA + A+ F
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M F C P N I++ LV + Y A ++ GV P+ +++ + +++FC G
Sbjct: 97 MDLFACPPAAPAYNAIMDALV-NAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+A L + ERG +Y +++GL A L ++ML + PD ++
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L++LC+K + E+ LL ++ +G + + N + G C +GR +A ++E M +
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
P++V+Y TL+ GLC A +Y+ M+++G P + +I G+C G + EA
Sbjct: 276 -VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L++ + G P T+ ++ +CA ++E+ E+ NE ++K D
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPD 384
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 155/303 (51%), Gaps = 3/303 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L++ + + A + M+ C P N I++ L+ A
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK-SGMLQEA 334
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L K A G +P+ +Y ++ C GDI A LFN+ + + PD+ Y L++G
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LCR+ + A+ ++ +M+ +G PD +Y ++N LC+ + +A ++ VKG PD
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +NT++ G+C+ + A +++E M + G P++++Y +++ GLC G + +
Sbjct: 455 VFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFE 514
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI KG P+ + LI+ FC + +++EA GV+ + + G P ++ ++ C
Sbjct: 515 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNG 574
Query: 426 EME 428
+++
Sbjct: 575 DLD 577
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
AE ++ +RAL+ F + KP N +++ L + + A + + G P+
Sbjct: 362 AEGDI-ERALELFNEAQAKDLKPDLVVYNSLVKGL-CRQGLILHALQVMNEMVEEGCHPD 419
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YNI++ C G+IS A + N +G +PDV ++ L+ G C++ +++ A+ L+E
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 479
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G PD ++Y ++LN LC+ K +E + M +KGC P+ + YN ++ FC+
Sbjct: 480 RMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 539
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ +A V+ M +G +P+ VS+ TL+ G C G D A Q + KG+S +
Sbjct: 540 QLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 599
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI + + + A + E++ G P T+ ++V +C +++ L E++
Sbjct: 600 ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMI 657
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 3/287 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L Y L+K L AL+ M+E C P N I+ L N + A
Sbjct: 383 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN-ISDAAV 441
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ A G LP+ ++N ++ +C + A L +M+ G+ PDV +Y ++ GLC
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + + E+M+ KG P+ ++Y L+ + C+ +L EA ++ RM G PD V
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ GFCR G A + + + G ++ L+G + +A+K M
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
ISKG+ P L+ G C VD A L E++ G P T+
Sbjct: 622 ISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAL 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 LEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 166/344 (48%), Gaps = 3/344 (0%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
I++ + G+ ++ +IL T ++ + +F+ LI Y ES A++ +R E
Sbjct: 38 IVVSRKGKGSASAVFAEILETKGTQTSDI--YVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ ++LE L+ + Y + + ++ + + G + +NI+M +F G+I +
Sbjct: 96 KFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A ++F+ + + G+ P V S+ LM G + ++ L M G PD +Y+ L+N
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC++ K+ +A +L M G P+ V + T++ G C+ GR + A ++ + M S P
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSP 274
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L++Y TL+ GLC +G A+ + M KG P LI G C G ++ A
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYR 334
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++K + + ++ +C ++L E++ V +K
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYVPSVVT 418
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+V A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 7/329 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTF 153
TY I+I L + L +L L ++ P++ TY I I A E + + A+K
Sbjct: 174 TYNIMIGSLCNRRKLGLALKVLDQLLLDN--CMPTVITYTILIEATIVEGGI-NEAMKLL 230
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML P N I+ + R A +L S G P+ SYNI++RAF
Sbjct: 231 EEMLARGLLPDMYTYNAIIRGMCKEGMVERAA-ELITSLTSKGCKPDVISYNILLRAFLN 289
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G L +MF RG P+ +Y IL+ LCR +++ A+ +L+ M+ K PDT S
Sbjct: 290 QGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 349
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+++LC++ +L A ++ M GC PDIV+YNT++ C+ G A A ++ +
Sbjct: 350 YDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 409
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC PN+ SY T++ L G A + MISKG P ++LI C G V+
Sbjct: 410 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVE 469
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
EA G+L+++ ++G P ++ +++ +C
Sbjct: 470 EAIGLLDDMEQSGFRPTVISYNIVLLGLC 498
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 18/296 (6%)
Query: 159 FNCKPLPKQLNRILELLVTHR-----------------NYLRPAFDLFKSAHKHGVLPNT 201
FN K + K +R++E+L +H N + A + G LP+
Sbjct: 114 FNFKNIEKA-SRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDI 172
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+YNIM+ + C + +A + +++ MP V +Y IL++ + +N A+ LLE+
Sbjct: 173 VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML +G +PD +Y ++ +C++ + A +L+ + KGC PD++ YN ++ F +G+
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ K++ +M S GC PN V+Y L+ LC G D A +++MI K +P
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI C G++D A G+++ ++ G P + I+ +C + E+ N++
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 151/294 (51%), Gaps = 3/294 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY +I+ + + +RA + S+ CKP N +L + +
Sbjct: 240 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKW-DEGEK 298
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G PN +Y+I++ + C G I A ++ M E+ + PD SY L+ LC
Sbjct: 299 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 358
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ A+ +++ M++ G +PD ++Y T+L +LC+ +A ++ +++ GC P++
Sbjct: 359 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 418
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G A ++ M S G P+ ++Y +L+ LC G+ + A + M
Sbjct: 419 SYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDM 478
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
GF P + ++ G C V ++D+A G+ E+++ G P+E T+++++ I
Sbjct: 479 EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 3/310 (0%)
Query: 130 PSLFTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I I + N ALK +L NC P ++E + + A
Sbjct: 170 PDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG-INEAMK 228
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+LP+ +YN ++R C G + A L + +G PDV SY IL++
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFL 288
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + + L+ +M ++G P+ ++Y+ L++SLCR ++ EA +L M K PD
Sbjct: 289 NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 348
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ C+EGR A +++ M SNGCLP++V+Y T++ LC G + A + +
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ S + +I + G A G++ ++ G P E T+ ++ +C +
Sbjct: 409 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLV 468
Query: 428 EKLGEVLNEI 437
E+ +L+++
Sbjct: 469 EEAIGLLDDM 478
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 133/248 (53%), Gaps = 13/248 (5%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ E PDV +Y ++ G C+ +++ A +L M +GF+PD ++Y ++ SLC ++
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
KL A K+L ++ + C P ++ Y ++ EG +A K+LE+M + G LP++ +Y
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
++ G+C +GM + A + + + SKG P + L++ F N GK DE ++ E+
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI-------------VEAG 452
G P++ T+ +++ +C +++ VL +++ E+ DT ++
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 453 IGLEDYLI 460
IG+ DY+I
Sbjct: 367 IGIMDYMI 374
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G F+ + +++ +++KG++P + LIKGF N +++A V+ E+L++ P
Sbjct: 79 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ C +E +VLN +
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRM 163
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 130 PSLFTYLIKIYAESNLPDR--ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ +Y I A + DR AL +M+ P N ++ L + A
Sbjct: 415 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC-RDGLVEEAIG 473
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P SYNI++ C I A +F +M E+G P+ +Y +L++G+
Sbjct: 474 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 533
Query: 248 RKSQVNRAVDLLEDMLNKGFV 268
A++L + ++ +
Sbjct: 534 FAGWRTEAMELANSLFSRDVI 554
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 167/332 (50%), Gaps = 9/332 (2%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTF-RSMLEFNCK--PLPKQLNRILELLVTHRNYLR 183
P T + +A + PDRALKTF R++ + C P+ N +++ L+ N +
Sbjct: 93 PCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALL-RENMVG 151
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
+ + K GV PN +YN+++RA C N + A + ++M +G PD +Y ++
Sbjct: 152 AVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIV 211
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC +V+ A ++L P SY ++ +LCR+ +++E + ++ M +G
Sbjct: 212 SALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQ 266
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P+++ Y T+V FC+ G AC +L M GC PN+ ++ LVGGL + G A
Sbjct: 267 PNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDM 326
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+++G++P + LI+G C+VG + A VL ++ + G P+ T+ ++
Sbjct: 327 WKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSK 386
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
+++ + N++ + K + + +G+
Sbjct: 387 AGDLDGAISIWNDMTRSGCKPNVVVYTNMVGV 418
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 1/252 (0%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P+ N ++ L + ++ F + G+ PN +Y ++ AFC G++ +A
Sbjct: 232 PVAASYNAVI-LALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACA 290
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ +M G P+V ++ L+ GL +V+ A+D+ + M+ +G+ P T+SY L+ LC
Sbjct: 291 ILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLC 350
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
L+ A +L M+ GC P+ Y+T++ GF + G A + DM +GC PN+V
Sbjct: 351 SVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVV 410
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y +VG C + MF+ A+ + M+ + P+ + LI+ CN +V A GV E+
Sbjct: 411 VYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEM 470
Query: 403 LKAGEAPHEDTW 414
+ G P+ T+
Sbjct: 471 RRHGCPPNGRTY 482
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 165/342 (48%), Gaps = 7/342 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLP 146
QPN TY ++ +A + IL + + FT L+ ++ + +
Sbjct: 266 QPNV----ITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVH 321
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL ++ M+ P N ++ L + + L+ A + +HG PN ++Y+
Sbjct: 322 D-ALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGD-LKGASSVLNDMEQHGCFPNARTYST 379
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ F GD+ A +++N M G P+V Y ++ C+K N+A L++ ML +
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN 439
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P+T+++ TL+ SLC +++ A + M+ GC P+ YN ++ G REG DA
Sbjct: 440 CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDAL 499
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++ +M ++G +LV+Y T+V GLC M A ++ MI +G P A+I +
Sbjct: 500 QMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAY 559
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C G+V A +L + + + +++ ++C +++E
Sbjct: 560 CKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLE 601
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 4/270 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + P+ TY LI ++++ D A+ + M CKP ++ + +
Sbjct: 366 EQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVF-CKKLM 424
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A L PNT ++N ++R+ C + A +F++M G P+ +Y
Sbjct: 425 FNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNE 484
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL R+ A+ ++ +M N G ++Y T+++ LC+ + REA + RM V+G
Sbjct: 485 LLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRG 544
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD + ++ +C+EG A +L M C N++ Y L+ LC+Q + A
Sbjct: 545 IQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAM 604
Query: 362 KYMQLMISKGFSPHFSVSHALIKG-FCNVG 390
Y+ M+ +G P+ + L++G F N+G
Sbjct: 605 VYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 634
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 151/289 (52%), Gaps = 1/289 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ RSM++ NC+P N I++ L R + A ++F G+ PN +YN ++
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ-VNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C + TL N+M + +MP+V + L+ LC++ V A D+++ M+ +G
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++YT L++ C + ++ EA K+ M KGC P+++ Y+T++ G+C+ R A +
Sbjct: 317 PDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYL 376
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
E+M +PN+V+Y TL+ GLC G A M++ G P L+ C
Sbjct: 377 FEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCK 436
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+D+A +L+ + + AP ++ +++ +C E+E G++ + +
Sbjct: 437 TRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSL 485
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 136/265 (51%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N + F + K G P+T ++ ++R C G I A LF+KM G P+
Sbjct: 121 HLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGV 180
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLC+ A+ LL M+ K P+ ++Y T+++ L + +++ EA + M
Sbjct: 181 TYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEM 240
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
KG +P++ YN+++ G C+ ++ +M + +PN+V + TLV LC +GM
Sbjct: 241 IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMV 300
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+A + +MI +G P AL+ G C ++DEA V + +++ G AP+ ++ +
Sbjct: 301 TIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTL 360
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI 442
+ C + ++K + E+ + E+
Sbjct: 361 INGYCKIQRIDKAMYLFEEMCQREL 385
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 164/334 (49%), Gaps = 6/334 (1%)
Query: 105 LGRAKY-FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
L R + FS++ I K H P T + FT LI+ AL F M+ +P
Sbjct: 122 LNRVDFGFSVLAKIF---KLGHQPDTAT-FTTLIRGLCVEGKIGEALHLFDKMVGEGFQP 177
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ L N R A L +S + PN +YN ++ + ++ A +
Sbjct: 178 NGVTYGTLIHGLCKVGNS-RAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F++M +G+ P+V +Y ++ GLC+ S+ L+ +M++ +P+ + +TTL+++LC+
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ + A+ ++ M +G PD+V Y ++ G C +A KV + M GC PN++S
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ G C D A + M + P+ + LI G C+VG++ +A + E++
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+G+ P T+ +++ +C +++ +L I
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI 450
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D AL +F ML P +IL + ++Y L K G+ + +
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHY-STVLSLSKQMDSLGIPSDVYT 111
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
I++ +FC + +++ K+F+ G PD ++ L++GLC + ++ A+ L + M+
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+GF P+ ++Y TL++ LC+ R A +LL M K C P+++ YNT++ ++ +
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A + +M + G PN+ +Y +++ GLC + M M+ P+ + L+
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
C G V A V++ +++ G P T+ ++ C EM++ +V + +V+
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 133/261 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R+ + A +F + + G PN SY+ ++ +C I A LF +M +R ++P++ +
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC ++ A+ L +M+ G +PD ++Y LL+ LC+ + L +A +L ++
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
PDI YN V+ G CR G A + + S G P++ +Y ++ GLC QG+
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLA 511
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K + M + G SP + + +GF + A +L+E+L G + T +IV
Sbjct: 512 EATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+ + + ++L+E V+
Sbjct: 572 EMLSDDGLDQSVKQILHEFVQ 592
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ +Y LI Y + D+A+ F M + P N ++ L H LR A
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC-HVGRLRDAIA 410
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G +P+ +Y I++ C + A + + + PD++SY I++ G+C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A DL + +KG PD +YT ++N LC + L EA KL M GC+PD
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN + GF R + A ++L++M G + + +V L D G+ K+ +
Sbjct: 531 TYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
S +L +M G+ DV + I++ C ++V+ +L + G PDT ++TTL
Sbjct: 91 STVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTL 150
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ LC + K+ EA L +M +G P+ V Y T++ G C+ G + A ++L M C
Sbjct: 151 IRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNC 210
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
PN+++Y T++ L + A MI+KG SP+ S +++I G C +
Sbjct: 211 EPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVAT 270
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ E++ + P+ + +V +C E + + +++V V I+
Sbjct: 271 LMNEMVDSKIMPNVVIFTTLVDALCK----EGMVTIAHDVVDVMIQ 312
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A + FN+M P V + ++ + + + L + M + G D +
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++NS C ++ + +L ++ G PD + T++ G C EG+ +A + + M G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PN V+Y TL+ GLC G A + ++ M+ K P+ + +I +V+EA
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ E++ G +P+ T+ I+ +C E + + ++NE+V +I
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKI 280
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 178/343 (51%), Gaps = 3/343 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP-VTPSLFTY 135
L F +AS+QP +RHS Y +I LG+ + F + ++ ++ E+ V+P +F
Sbjct: 137 LGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVV 196
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A + + +A++ M ++ C+P +L+ L + + ++ A LF+
Sbjct: 197 LMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGS-VKEAASLFEDMRIR 255
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P K + ++ +C G + A + ++ E G PD+ Y L+ G ++ A
Sbjct: 256 -FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDA 314
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL++M K P+ +S+TTL+ +LC KKK+ EA ++ M+ GC D V Y T++ G
Sbjct: 315 YDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISG 374
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G+ ++L++M G +PN ++Y ++ + + + M+ M G +P
Sbjct: 375 FCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPD 434
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ + +I+ C +G++ E V E+ G +P DT+V+++
Sbjct: 435 LNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMI 477
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++MR F + A + ++M + G PD + L+ LC+ V A L EDM
Sbjct: 194 FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMR 253
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ F P +T+LL CR+ KL EA +L +++ G PDIV YN ++ G+ G+ +
Sbjct: 254 IR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMV 312
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA +L++M C PN++S+ TL+ LC + + A + M S G LI
Sbjct: 313 DAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLI 372
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFC GK+ + +L+ +++ G P+ T++ I+ EE+E+ E++ E+ K+
Sbjct: 373 SGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCT 432
Query: 444 GDTRI 448
D I
Sbjct: 433 PDLNI 437
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 46/304 (15%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL K + PN S+ +++A C + A +F +M G D +Y L+
Sbjct: 314 AYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLIS 373
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++++ +LL++M+ +G +P+ ++Y ++ + +K++L E +L+ M+ GC P
Sbjct: 374 GFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 433
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN V+ C+ G + +V +M + G P L ++ ++ G Q A ++
Sbjct: 434 DLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFF 493
Query: 365 QLMISKGF--SPHFSVSHALIKGF--------------------CNV------------- 389
+ M+ +G +P + L+ C++
Sbjct: 494 KEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALF 553
Query: 390 --GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
G V EAC +++ AG P DT+ + M L ++ N + EI R
Sbjct: 554 SNGHVKEACSYCLDMMDAGVMPQPDTFAKL---------MRGLRKLYNRQIAAEITEKVR 604
Query: 448 IVEA 451
+ A
Sbjct: 605 KMAA 608
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 183/401 (45%), Gaps = 1/401 (0%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
+NS + S ++ ++ + P A+ IF+ Q R + TY L+ L R K F
Sbjct: 51 NNSCGTVRSRTKLMNILVERGKPQEAQFIFNSLVEQ-GHRPTTVTYTALVAALTRQKRFK 109
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
I +L ++ L +I ++ES A++ F+ M E CKP N ++
Sbjct: 110 AISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLI 169
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ R L + PN ++YNI++ A C I A+ + ++M GV
Sbjct: 170 KGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGV 229
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV +Y L + + + N+A ++ DMLNK P+ + ++ C + L EA +
Sbjct: 230 QPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALR 289
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
++ RM+ G +P++V +N+++ GF G + K L M +G P+++++ T++ G
Sbjct: 290 VVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWS 349
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D ++ M+ G P V L KGF G+ +A +L + K G P+
Sbjct: 350 SAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVV 409
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ I+ C +MEK +V + +++ + + E I
Sbjct: 410 IFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLI 450
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 5/323 (1%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P + ++ + +R N + +N TY IL+ L + K +++ + + V P + T
Sbjct: 178 PEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASG--VQPDVVT 235
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y L + YA+ ++A ML P + I+ N L A +
Sbjct: 236 YNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGN-LAEALRVVYRM 294
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ PN +N +++ F GD M E GV PDV ++ +M G ++
Sbjct: 295 RDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRM 354
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++ ++ +DML G PD ++ L R + +A LL M G P++V + T+
Sbjct: 355 DKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTI 414
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C G+ A KV E M PNL ++ TL+ G + A++ +Q+M
Sbjct: 415 ISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNV 474
Query: 373 SPHFSVSHALIKGFCNVGKVDEA 395
P S + + + ++G V++A
Sbjct: 475 VPENSTLKLVSEAWRSIGMVNDA 497
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 137/257 (53%), Gaps = 1/257 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L +S + + P+ +YN +MR C + + A +M +G +PD +Y
Sbjct: 166 LEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNT 224
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C++ + A +LL+D + KGFVPD ++Y +L+N LC + + A +L + K
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V YN++V G CR+G + A +V+ +M +GC P++ +Y ++ GLC G A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M I KG+ P + +I G+C K+D A ++E + G AP T+ ++ +
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404
Query: 422 CAGEEMEKLGEVLNEIV 438
C + +++ E E++
Sbjct: 405 CKAGKAKEVNETFEEMI 421
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P T+ ++I + + P AL+ RS+ E C P ++ L H + A
Sbjct: 41 VAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAH-GHGYDA 99
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF + V P+ ++N ++ A C GDI + L K+ +RG+ + + I ++G
Sbjct: 100 RHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG 159
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ AV L+E M + PD ++Y TL+ LC+ K++EA + L RM +GC PD
Sbjct: 160 LCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPD 218
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YNT++ G+C+ +A ++L+D G +P+ V+Y +L+ GLC +G + A +
Sbjct: 219 DFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN 278
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+K P V ++L+KG C G + A V+ E+++ G P T+ +++ +C
Sbjct: 279 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMG 338
Query: 426 EMEKLGEVLNEIV 438
+ V+N+ +
Sbjct: 339 NISDAAVVMNDAI 351
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 135/261 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF A + P+ YN +++ C G I A + N+M E G PD+ +Y I++
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ A ++ D + KG++PD ++ T+++ C++ KL A +L+ RM + G P
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAP 392
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + YN+V+ G C+ G+A + + E+M GC PN ++Y L+ C + A +
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P + LI GFC G +D A + ++L + G + DT+ +++ +
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
M+ ++ E++ K D
Sbjct: 513 LNMQMAEKIFGEMISKGYKPD 533
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 155/303 (51%), Gaps = 3/303 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY L++ + + A + R M+ C P N I++ R+ L+ A
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK-RDMLQEA 238
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L K A G +P+ +Y ++ C GD+ A LFN+ + + PD+ Y L++G
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LCR+ + A+ ++ +M+ G PD +Y ++N LC+ + +A ++ VKG PD
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +NT++ G+C+ + A +++E M G P+ ++Y +++ GLC G + +
Sbjct: 359 VFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFE 418
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI KG P+ + LI+ FC + +++EA GV+ + + G P ++ ++ C
Sbjct: 419 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNG 478
Query: 426 EME 428
+++
Sbjct: 479 DLD 481
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
AE ++ +RAL+ F + KP N +++ L + + A + + G P+
Sbjct: 266 AEGDV-ERALELFNEAQAKDLKPDLVVYNSLVKGL-CRQGLILHALQVMNEMVEDGCHPD 323
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YNI++ C G+IS A + N +G +PDV ++ ++ G C++ +++ A+ L+E
Sbjct: 324 IWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVE 383
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G PD ++Y ++LN LC+ K +E + M +KGC P+ + YN ++ FC+
Sbjct: 384 RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 443
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ +A V+ M +G +P+ +S+ TL+ G C G D A Q + KG+S +
Sbjct: 444 QLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 503
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI + + + A + E++ G P T+ ++V C +++ L E+V
Sbjct: 504 ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMV 561
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 3/315 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L Y L+K L AL+ M+E C P N ++ L N + A
Sbjct: 287 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN-ISDAAV 345
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ A G LP+ ++N M+ +C + A L +M+ G+ PD +Y ++ GLC
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + + E+M+ KG P+ ++Y L+ + C+ +L EA ++ RM G PD +
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ GFCR G A + + + G ++ L+G + +A+K M
Sbjct: 466 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 525
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
ISKG+ P L+ G C VD A L E++ G P T+ ++ + +
Sbjct: 526 ISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRV 585
Query: 428 EKLGEVLNEIVKVEI 442
+ +++ +V++ +
Sbjct: 586 SEAVAIIHIMVRMGV 600
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
F C P N I++ LV + Y A ++ GV P+ +++ + +++FC G
Sbjct: 4 FGCPPAAPAYNAIMDALV-NTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPH 62
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+A L + ERG +Y +++GL A L ++ML + PD ++ +L
Sbjct: 63 VALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++LC+K + E+ LL ++ +G + + N + G C GR +A ++E M +
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IA 181
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y TL+ GLC A +Y++ M+++G P + +I G+C + EA +
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L++ + G P T+ ++ +CA ++E+ E+ NE ++K D
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPD 288
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 31/308 (10%)
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
LPD + TF +M++ CK L L A L + +G+ P+ +Y
Sbjct: 356 LPD--VFTFNTMIDGYCKRLK----------------LDSALQLVERMWMYGIAPDAITY 397
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ C G F +M +G P+ +Y IL++ C+ +Q+ A ++ M
Sbjct: 398 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQ 457
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G VPDT+S+ TL++ CR L AY L ++ KG + +N ++ + +
Sbjct: 458 DGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 517
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+ +M S G P+L +YR LV G C D A ++ M+SKGF P + ++
Sbjct: 518 AEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLN 577
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPH-------EDTWVMIVPQICAGEEMEK------LG 431
+V EA ++ +++ G P D + P+I E M+K
Sbjct: 578 SLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYPTY 637
Query: 432 EVLNEIVK 439
EVL+E V+
Sbjct: 638 EVLHEGVR 645
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 170/376 (45%), Gaps = 36/376 (9%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDI 117
P SP ++ L+ Q D A +F +AS QPN+ S + L+ +L RA F + +
Sbjct: 55 PDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTL 114
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
L + S PV S F ++ YA S+ L PL L+
Sbjct: 115 LRQMHSSKIPVDESTFLIFLETYATSH-----------HLHAEINPL---------FLLM 154
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R++ V P+T+ YN+ + + + TL +KM V PDV
Sbjct: 155 ERDF--------------AVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVS 200
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ IL++ LC+ Q+ A+ +LEDM N G PD ++TTL+ + + A ++ M
Sbjct: 201 TFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELM 260
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
GC V N +V G C+EGR +A + + + G P+ V++ LV GLC G
Sbjct: 261 VESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHI 318
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ M M+ KGF ++LI G C +G++DEA +L ++ P+ T+ +
Sbjct: 319 KQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL 378
Query: 418 VPQICAGEEMEKLGEV 433
+ +C +E E+
Sbjct: 379 IGTLCKENHVEAATEL 394
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 154/313 (49%), Gaps = 36/313 (11%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A++ M+ +C+P N ++ L N++ A +L + GVLP+ ++N
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLC-KENHVEAATELARVLTSKGVLPDVCTFNS 412
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ---------------------- 244
+++ C + IA LF +M E+G PD +Y IL++
Sbjct: 413 LIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472
Query: 245 -------------GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
GLC+ ++V A D+ + M G +++Y TL+N LC+ K++ EA
Sbjct: 473 CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAA 532
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L+ +M ++G PD Y T++ FC++G A ++++M NGC P++V+Y TL+GGL
Sbjct: 533 QLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G DVA K ++ + KG + +I+ C + EA + E+++ G+ P
Sbjct: 593 CKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDV 652
Query: 412 DTWVMIVPQICAG 424
T+ ++ +C G
Sbjct: 653 ITYKIVFRGLCNG 665
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 3/246 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ C + A L + +GV+PDV ++ L+QGLC S A++L
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M KG PD +Y+ L+ SLC +++L+EA LL M++ GC ++V YNT++ G C+
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R DA + + M G + V+Y TL+ GLC + A + M MI +G P
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++K FC G + A +++ + G P T+ ++ +C ++ ++L
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR--- 606
Query: 439 KVEIKG 444
V++KG
Sbjct: 607 SVQMKG 612
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 173/355 (48%), Gaps = 13/355 (3%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ ILI L +A L IL+ +Y + P FT L++ + E + AL+
Sbjct: 200 STFNILIRALCKAH--QLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIK 257
Query: 154 RSMLEFNCKPLPKQLNRILELLVTH---RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
M+E C+ +N ++ L LR ++ + G P+ ++N ++
Sbjct: 258 ELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE------EEGFCPDQVTFNALVNG 311
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G I + + M E+G DV +Y L+ GLC+ +++ AV++L M+++ P+
Sbjct: 312 LCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN 371
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
T++Y TL+ +LC++ + A +L + KG PD+ +N+++ G C A ++ E
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M GC P+ +Y L+ LC + A ++ M G + + V + LI G C
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+V +A + +++ G + T+ ++ +C + +E+ +++++++ +K D
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 37/356 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L + + ++ L S+ F LI+ ++ + A++ F M
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C P + ++E L + R L+ A L K G N YN ++ C N
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERR-LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNR 492
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A +F++M GV +Y L+ GLC+ +V A L++ M+ +G PD +YTT
Sbjct: 493 VGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTT 552
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE------ 330
+L C++ ++ A ++ M + GC PDIV Y T++ G C+ GR A K+L
Sbjct: 553 MLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKG 612
Query: 331 -----------------------------DMPSNGCLPNLVSYRTLVGGLCDQGM-FDVA 360
+M G P++++Y+ + GLC+ G A
Sbjct: 613 MVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEA 672
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ M+ KG P F L +G C++ D ++ +++ G +T ++
Sbjct: 673 VDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSII 728
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 5/211 (2%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ P+ +Y M++ FC GDI A + M G PD+ +Y L+ GLC+ +V+
Sbjct: 541 EGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDV 600
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A LL + KG V +Y ++ +LC++K+ +EA +L M KG PD++ Y V
Sbjct: 601 ASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFR 660
Query: 315 GFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C G I +A +M G LP S+ L GLC M D + + +++ KG
Sbjct: 661 GLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG-- 718
Query: 374 PHFSVSH-ALIKGFCNVGKVDEACGVLEELL 403
FS S ++I+GF + K ++A L +L
Sbjct: 719 -RFSQSETSIIRGFLKIQKFNDALANLGAIL 748
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI ++ D A K RS+ P+ N +++ L R + A
Sbjct: 580 PDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALC-KRKRTKEAMR 638
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF+ + G P+ +Y I+ R C G I A +M E+G++P+ S+ L +GL
Sbjct: 639 LFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGL 698
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
C S + + L+ ++ KG S T+++ + +K +A
Sbjct: 699 CSLSMEDTLIQLINMVMEKGRFSQ--SETSIIRGFLKIQKFNDA 740
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 198/390 (50%), Gaps = 14/390 (3%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P R+ +I Q + LA +IF YA + P F H+ TY ++ KL RA+ F ++ ++
Sbjct: 47 PKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMAD 106
Query: 121 LKSEHYPVT--PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
L++ + P+ +LF L++ Y + + +++ F + +F K + LN +L +L+ +
Sbjct: 107 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 166
Query: 179 RNYLRPAFDLFKSAHKH-----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
+ FDL + K+ G+ PN + N++++A C DI AY + +++ G++
Sbjct: 167 QR-----FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLV 221
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P++ +Y ++ G + + A +LE+ML++G+ PD ++YT L++ C+ + EA +
Sbjct: 222 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATV 281
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ M+ P+ V Y ++ C+E ++ +A + ++M +P+ ++ LC+
Sbjct: 282 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCE 341
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
D A + M+ P ++ LI C G+V EA + +E K G P T
Sbjct: 342 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLT 400
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++ +C E+ + G + +++ + + K
Sbjct: 401 YNTLIAGMCEKGELTEAGRLWDDMFERKCK 430
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 8/257 (3%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + K+ + PN +Y +M+RA C A +F++M +R MPD ++
Sbjct: 278 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVID 337
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC +V+ A L ML +PD +TL++ LC++ ++ EA KL KG P
Sbjct: 338 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFD-KGSIP 396
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ YNT++ G C +G +A ++ +DM C PN +Y L+ GL G + +
Sbjct: 397 SLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 456
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G P+ + L +G +GK ++A ++ + G+ E +W + + +
Sbjct: 457 EEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDKE-SWELFLNKFVG- 514
Query: 425 EEMEK----LGEVLNEI 437
E++K L E+L+EI
Sbjct: 515 -ELDKGVLALKELLHEI 530
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 179/347 (51%), Gaps = 10/347 (2%)
Query: 117 ILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L+ K Y P+ TY ++ + +S A++ R M E N K + + I++
Sbjct: 311 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L H + L AF+LF G+ N +YNI++ FC G L M +R + P
Sbjct: 371 LCKHGS-LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V ++ +L+ ++ ++ A +L ++M+++G PDT++YT+L++ C++ L +A +++
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M KGC+P+I +N ++ G+C+ R D ++ M G + + V+Y TL+ G C+
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 549
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G +VAK+ Q M+S+ P+ L+ G C+ G+ ++A + E++ K+ +
Sbjct: 550 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 609
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIG 461
+I+ +C K+ + + + +KG V+ G+ + +IG
Sbjct: 610 NIIIHGMCNA---SKVDDAWDLFCSLPLKG----VKPGVKTYNIMIG 649
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 130/254 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF K G PNT +++ ++ C G +S A L ++M E G PD+ + L+
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A+ L++ M+ G P+ ++Y +LN +C+ + A +LL +M+ +
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y+ ++ G C+ G +A + +M G N+++Y L+GG C+ G +D K +
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI + +P+ LI F GK+ EA + +E++ G AP T+ ++ C
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479
Query: 425 EEMEKLGEVLNEIV 438
++K ++++ +V
Sbjct: 480 NHLDKANQMVDLMV 493
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLN--RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ FR M+ + +PLP ++ R+ + + Y L K G+ N +
Sbjct: 168 DDAIDLFRDMI--HSRPLPTVIDFSRLFSAIAKTKQY-DLVLALCKQMELKGIAHNLYTL 224
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+IM+ FC + +A++ K+ + G P+ ++ L+ GLC + +V+ A++L++ M+
Sbjct: 225 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 284
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD ++ TL+N LC K EA L+ +M GC P+ V Y V+ C+ G+
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A ++L M + V Y ++ GLC G D A M KG + + + LI
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
GFCN G+ D+ +L +++K P+ T+ +++ ++ + E+ E++ I
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464
Query: 445 DT 446
DT
Sbjct: 465 DT 466
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 143/312 (45%), Gaps = 5/312 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K+ SL + + + E +T ++ TY LI + + D K R M++ P
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++ V LR A +L K G+ P+T +Y ++ FC + A +
Sbjct: 430 NVVTFSVLIDSFV-KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
+ M +G P++ ++ IL+ G C+ ++++ ++L M +G V DT++Y TL+ C
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
KL A +L M + P+IV Y ++ G C G + A ++ E + + ++
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C+ D A + KG P + +I G C G + EA + ++
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668
Query: 404 KAGEAPHEDTWV 415
+ G AP D W
Sbjct: 669 EDGHAP--DGWT 678
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N+L A + G PN +++NI++ +C I LF KM RGV+ D +
Sbjct: 479 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 538
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+QG C ++N A +L ++M+++ P+ ++Y LL+ LC + +A ++ +++
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
DI YN ++ G C + DA + +P G P + +Y ++GGLC +G
Sbjct: 599 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 658
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A+ + M G +P + LI+ G ++ ++EEL + G + T M++
Sbjct: 659 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718
Query: 419 PQI 421
+
Sbjct: 719 DML 721
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 38/267 (14%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H + P TY LI + + N D+A + M+ C P + N IL N +
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN-ILINGYCKANRI 517
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+LF+ GV+ +T +YN +++ FC G +++A LF +M R V P++ +Y+IL
Sbjct: 518 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 577
Query: 243 M-----------------------------------QGLCRKSQVNRAVDLLEDMLNKGF 267
+ G+C S+V+ A DL + KG
Sbjct: 578 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 637
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P +Y ++ LC+K L EA L +M+ G PD YN ++ +G A + K
Sbjct: 638 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 697
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
++E++ G + + + ++ L D
Sbjct: 698 LIEELKRCGFSVDASTIKMVIDMLSDD 724
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 3/244 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY +R+ + A LF M +P V + L + + Q + + L + M
Sbjct: 153 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 212
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG + + + ++N CR +KL A+ + ++ G P+ + ++T++ G C EGR
Sbjct: 213 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 272
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A ++++ M G P+L++ TLV GLC G A + M+ G P+ +
Sbjct: 273 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 332
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ C G+ A +L ++ + + +I+ +C ++ + NE+ E+
Sbjct: 333 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EM 389
Query: 443 KGDT 446
KG T
Sbjct: 390 KGIT 393
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 131/305 (42%), Gaps = 28/305 (9%)
Query: 165 PKQLNRILELLVTHRN---YLRPAFDLFKSAHKHG-------------------VLPNTK 202
P NR L+L+ H + R D FK K G + PN
Sbjct: 62 PFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPN-- 119
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE-SYRILMQGLCRKSQVNRAVDLLED 261
++ ++ D I Y F R V D SYR ++ + + A+DL D
Sbjct: 120 EFDEWIKEVDVGSDGKIRYEDF---IARMVANDRNLSYRERLRSGLVDIKADDAIDLFRD 176
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M++ +P + ++ L +++ + K+ L +M++KG ++ + ++ FCR +
Sbjct: 177 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 236
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A + + G PN +++ TL+ GLC +G A + + M+ G P +
Sbjct: 237 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 296
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
L+ G C GK EA +++++++ G P+ T+ ++ +C + E+L ++ +
Sbjct: 297 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 356
Query: 442 IKGDT 446
IK D
Sbjct: 357 IKLDA 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ ++ ++AL+ F +E + L + I+ + + + + A
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDA 625
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+DLF S GV P K+YNIM+ C G +S A LF KM E G PD +Y IL++
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++V L+E++ GF D + +++ L K
Sbjct: 686 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 170/349 (48%), Gaps = 13/349 (3%)
Query: 97 TYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY LI LG+ K L++++ E + P + TY LI + +A
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEM------ERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K F+ M KP +++ L + A +L + GV P +YN ++
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDAL-GKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
F GD+ AY L ++M G PDV +Y L+ GL + SQ++ A +L+ M +G PD
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
T++Y TL+N L + L +A +L RMK KGCNPD+V Y+T++ + R AC + E
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE 383
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M S G P+L +Y +++ L G D A + M KG SP +A + G
Sbjct: 384 EMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG 443
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ EA + E++ ++G P T+ ++ + +E++ +L E+++
Sbjct: 444 RFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIE 492
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 173/351 (49%), Gaps = 5/351 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
+Y LI LGRA + +++ ++++ P+L+TY L+ ++ D AL+
Sbjct: 46 SYSCLINSLGRAGKWEAALEVVAEMQAKG--CKPNLWTYNTLVDCLGKAGQFDEALRLLA 103
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + C P + N ++ L L AF LF + G +P+T +YN ++
Sbjct: 104 EMRDNGCVPDVRTYNCLISTL-GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKV 162
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G A L +M G PDV +Y L+ GL + + +A L ++M +G PD++++
Sbjct: 163 GRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF 222
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T L+++L + ++ +A +LL MK +G P +V YN ++ GF + G ++A +L++M
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
NGC P++V+Y L+ GL D A + ++ M +G P + LI G G +++
Sbjct: 283 NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLND 342
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A + + + G P T+ ++ + +E + E+ V I+ D
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL--PDRALKTFR 154
TY LI LG+A S + ++ P FTY IY + +A++
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERG--CVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M C P + ++ L ++ AF LF+ + G P++ ++ +M A
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVK-AFKLFQEMKRRGRKPDSITFTALMDALGKA 232
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A L ++M ERGV P V +Y L+ G + + A +LL++M G PD ++Y
Sbjct: 233 GRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+ L+ L + +L EA ++L +M+ +GC PD + YNT++ G + G DA ++ + M S
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKS 352
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC P++V+Y TL+ L + A + M S G P ++I G+VD+
Sbjct: 353 KGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDD 412
Query: 395 ACGVLEELLKAGEAPH 410
A + E+ G +P
Sbjct: 413 ADRLFSEMRGKGLSPD 428
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 13/353 (3%)
Query: 97 TYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY LI G+ + ++L+D++ + P + TY LI +++ D A
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEM------KRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ + M + C P N ++ L L A LF G P+ +Y+ ++ A
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGL-GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITA 368
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+ A LF +M G+ PD+ +Y ++ L + QV+ A L +M KG PD
Sbjct: 369 LGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y LNSL R + +EA K+ MK G PD+ Y+ ++LG + DAC +L+
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
++ GC + + + + L G D A + +Q SKG P S +ALI G
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+V EA LE+L + G P ++ ++ + +++ E+L E+ K +K
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ P+ SY+ ++ + G A + +M +G P++ +Y L+ L
Sbjct: 31 LFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLG 90
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ Q + A+ LL +M + G VPD +Y L+++L + +L EA+ L M+ +GC PD
Sbjct: 91 KAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTF 150
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN+++ G + GR+ A ++LE+M +GC P++++Y +L+ GL G A K Q M
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+G P AL+ G+VD+A +L+E+ + G P T+ ++
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YN ++ A G A LF ++ PDV SY L+ L R + A+++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ +M KG P+ +Y TL++ L + + EA +LL M+ GC PD+ YN ++ +
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
GR +A + +M GC+P+ +Y +L+ GL G A + ++ M G P
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+LI G G+ +A + +E+ + G P T+ ++ + ++ E+L+E+
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 439 KVEIK 443
+ +K
Sbjct: 247 ERGVK 251
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P+V +Y L+ L + Q A L E++ + PD +SY+ L+NSL R K A ++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ M+ KGC P++ YNT+V + G+ +A ++L +M NGC+P++ +Y L+ L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A M +G P ++LI G VG+ +A +LEE+ + G P T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ + E K ++ E+ + K D+
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDS 219
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 7/262 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
TY LI LG+A + ++ + + E + P LFTY +I + ++ D A + F
Sbjct: 361 TYSTLITALGKA---ARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P N L L + + A +F+ + G+LP+ +Y+ ++
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRF-KEARKIFEDMKESGLLPDVATYDALLLGLSK 476
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
++ A L ++ E+G D + ++ L V+ A +LL+ +KG P S
Sbjct: 477 TKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASS 536
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+++L + ++ EA+ L +K +G PDIV Y++++ + G+ A ++LE+M
Sbjct: 537 YNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMS 596
Query: 334 SNGCLPNLVSYRTLVGGLCDQG 355
G + SY LV L D G
Sbjct: 597 KRGLKLSPRSYSNLVRKLQDWG 618
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+P++V YN+++ + G+ +A + E++ + P++VSY L+ L G ++ A +
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +KG P+ + L+ G+ DEA +L E+ G P T+ ++ +
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 129/242 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+P+ +YN ++R C A +M +G +PD +Y ++ G C+ S V A
Sbjct: 251 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 310
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+LL+D + KGFVPD ++Y +L+N LC + + A +L + KG PDIV YN++V G
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C +G + A +V+ +M GC P++ +Y ++ GLC G A M I KG+ P
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ LI G+C K+D A ++E + + G AP T+ ++ +C ++ ++ E E
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490
Query: 437 IV 438
++
Sbjct: 491 MI 492
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 36/355 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL------------- 172
P + TY LI+ + ++P A+ R M+ C P N I+
Sbjct: 251 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 310
Query: 173 ELL------------VTH---------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ELL VT+ + A +LF A G+ P+ YN +++
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G I A + N+M E G PD+++Y I++ GLC+ ++ A ++ D + KG++PD
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ TL++ C++ KL A +L+ RM G PD + YN+V+ G C+ G+ + + ++
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M GC PN ++Y L+ C + A K + M +G P + LI GFC G
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 550
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ A + ++L + G + DT+ ++ M ++ +E++ + D+
Sbjct: 551 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 605
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 1/293 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+RAL+ F KP N +++ L + + A + + G P+ ++YNI
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCL-QGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C G+IS A + N +G +PDV ++ L+ G C++ +++ A+ L+E M G
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PDT++Y ++LN LC+ K+ E + M +KGC+P+ + YN ++ FCR + +A
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
KV+ M G P+ VS+ TL+ G C G + A Q + KG+S + LI F
Sbjct: 521 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 580
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ A + +E+L G T+ +++ C +++ L E++K
Sbjct: 581 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 633
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + Y L+K L AL+ M E C P + N ++ L N + A
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN-ISDA 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ A G LP+ ++N ++ +C + A L +M+E G+ PD +Y ++ G
Sbjct: 415 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 474
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +VN + ++M+ KG P+ ++Y L+ + CR K+ EA K++ +M +G +PD
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 534
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V +NT++ GFCR G A + + + G ++ TL+G + +A+K
Sbjct: 535 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 594
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+SKG LI G C VD A L E++K G P T+ ++ +
Sbjct: 595 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 654
Query: 426 EMEKLGEVLNEIVKVEI 442
+ + +++ +VK+ +
Sbjct: 655 RVFQAVGIIHIMVKIGV 671
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 66/372 (17%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV-------THRNYLR- 183
L+ I+ YA + A+ F M F C P N I++ LV H+ Y+R
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 184 ------PAFD---------------------------------------LFKSAHKHG-- 196
P L+ H H
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 171
Query: 197 ----------VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
V PN ++N ++ A C GD+ A L K+ +RG+ ++ +Y I ++GL
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ AV L++ M VPD ++Y TL+ LC+K +EA L RM +GC PD
Sbjct: 232 CEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YNT++ G+C+ +A ++L+D G +P+ V+Y +L+ GLC +G + A +
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+KG P V ++L+KG C G + A V+ E+ + G P T+ +++ +C
Sbjct: 351 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 410
Query: 427 MEKLGEVLNEIV 438
+ V+N+ +
Sbjct: 411 ISDATVVMNDAI 422
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
LPD + TF ++++ CK L L A L + ++G+ P+T +Y
Sbjct: 427 LPD--VFTFNTLIDGYCKRLK----------------LDSALQLVERMWEYGIAPDTITY 468
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ C G ++ F +M +G P+ +Y IL++ CR +++ A ++ M
Sbjct: 469 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 528
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G PD +S+ TL+ CR L AY L +++ KG + +NT++ F +
Sbjct: 529 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 588
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+ ++M S G + +YR L+ G C D A ++ MI KGF P S +I
Sbjct: 589 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648
Query: 385 GFCNVGKVDEACGVLEELLKAGEAP-------HEDTWVMIVPQICAGEEMEK------LG 431
+V +A G++ ++K G P + D + P+I + M+K
Sbjct: 649 SLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTY 708
Query: 432 EVLNEIVKVEI 442
EVL+E V+ I
Sbjct: 709 EVLHEGVQSTI 719
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHR 415
Query: 405 AGEAP 409
G AP
Sbjct: 416 DGHAP 420
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 230 GANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G +P + L+ G
Sbjct: 410 LKEMHRDGHAPSVVTYNVLMNG 431
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 195/412 (47%), Gaps = 41/412 (9%)
Query: 55 SKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
SK P SP V +I + + LL F +AS+ R S +I+ + L + F L
Sbjct: 52 SKVPFLSPSIVTYIIKNPPNSLLGFRFFIWASKFRRLRSWVSHNMIIDM-LIKDNGFELY 110
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L +K + ++ FT LI+ YA+ ++ ++A+++F M +F+CKP N +L +
Sbjct: 111 WQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHV 170
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
+V + + A ++ K LPN +++I++ C +G A +F++M +R ++P
Sbjct: 171 MV-RKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILP 229
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+ +Y I++ GLC+ + + A L M + G +PD+++Y LL+ C+ ++ EA LL
Sbjct: 230 NKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLL 289
Query: 295 ----------------C-------------------RMKVKGCNPDIVHYNTVVLGFCRE 319
C +M PD++ Y ++ G +
Sbjct: 290 KYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKA 349
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG--FSPHFS 377
G+ DA ++L +M G +P+ Y L+ G CD G+ D AK + L ISK FS +
Sbjct: 350 GKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKS-LHLEISKNDCFSSACT 408
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ LI G C G V +A + E+ K G P T+ ++ C +EK
Sbjct: 409 YT-ILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEK 459
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 29/274 (10%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP---------- 234
A +F KHG P+ ++N ++ FC G+I A LF KM E G P
Sbjct: 425 AQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGA 483
Query: 235 ----DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
D S + +++ LC + +A ++L + + GF P+ ++Y L++ C+ + A
Sbjct: 484 NRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGA 543
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+KL +++KG +PD V Y T++ G R DA VL+ + NGC P Y++ +
Sbjct: 544 FKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTW 603
Query: 351 LCDQG----MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC-GVLEELLKA 405
C + F + KY++ + + SV K G+V+EA G+LE K
Sbjct: 604 SCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEK-----GEVEEAVRGLLEMDFKL 658
Query: 406 GE---APHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ AP+ W++ + Q EE K+ L E
Sbjct: 659 NDFQLAPYT-IWLIGLCQAGRLEEALKIFFTLEE 691
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 52/328 (15%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
S TY ILI + R+ D I + E + PS+ T+ LI + ++ ++A
Sbjct: 405 SACTYTILICGMCRSGLVG--DAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQL 462
Query: 152 TFRSMLEFNCKP-----LPKQLNRILELL--------VTHRNYLRPAFDLFKSAHKHGVL 198
F M E P L + NR+L+ + + A+++ G
Sbjct: 463 LFYKM-EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFA 521
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ FC G+I+ A+ LF ++ +G+ PD +Y L+ GL ++ A +
Sbjct: 522 PNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTV 581
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------------------- 293
L+ +L G P T Y + + CR+ K+ A+ L
Sbjct: 582 LDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEK 641
Query: 294 ---------LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L M K + + Y ++G C+ GR +A K+ + + L S
Sbjct: 642 GEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSC 701
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGF 372
L+ L G D+A + I KG+
Sbjct: 702 VKLIYRLLKVGNLDLAAEIFLYTIDKGY 729
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 136/240 (56%), Gaps = 3/240 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN MM +C G + A ER V D + L++GLC + + A+ +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++ML + VPD ++YT LL + C++ ++A KLL M+ KGC PDIV YN VV G C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EGR DA + L+++PS GC PN VSY ++ GLC ++ A++ M M KG P+
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI C G V+ A VLE++ K G +P+ ++ ++ C ++M+K L+ +V
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 146/297 (49%), Gaps = 4/297 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD + LK+ Y P+ +Y ++K + + A + M + C P N
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + + PA ++ + K+G PN+ SYN ++ AFC + A + M R
Sbjct: 306 LISFLC-RKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ AV+LL + +KG P +SY T+++ L + K +EA
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CRE R DA + + G PN V Y ++ G
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 484
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
LC + A MI G P+ S LI+G G + EA +L+EL GE
Sbjct: 485 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGE 541
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 153/285 (53%), Gaps = 5/285 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + +P+ +Y I++ A C A L ++M ++G PD+ +Y +++
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+C++ +V+ A++ L+++ + G P+T+SY +L LC ++ +A +L+ M KGC P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V +N ++ CR+G A +VLE +P GC PN +SY L+ C Q D A ++
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-A 423
LM+S+G P + L+ C G+VD A +L +L G AP ++ ++ + A
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLEDYLIGKTRS 465
G+ E L E+LNE+V ++ D + AG+ ED + R+
Sbjct: 419 GKTKEAL-ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 462
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 3/300 (1%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY I + A +A+K M + C P N ++ + + A
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG-ICQEGRVDDAI 250
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ K+ +G PNT SYNI+++ C A L +M ++G P+V ++ +L+ L
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 310
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CRK V A+++LE + G P++LSY LL++ C++KK+ +A L M +GC PDI
Sbjct: 311 CRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 370
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ CR G A ++L + GC P L+SY T++ GL G A + +
Sbjct: 371 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 430
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+SKG P + G C ++++A ++ G P+ + I+ +C E
Sbjct: 431 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 490
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 165/311 (53%), Gaps = 3/311 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY ++ + D A++ +++ + C+P N +L+ L T + A
Sbjct: 227 TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW-EDAE 285
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L + G PN ++N+++ C G + A + ++ + G P+ SY L+
Sbjct: 286 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF 345
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++++A+ L+ M+++G PD +SY TLL +LCR ++ A +LL ++K KGC P +
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L +M S G P++++Y T+ GLC + + A +
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G P+ + +A+I G C + A + ++ G P+E T+ +++ +
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525
Query: 427 MEKLGEVLNEI 437
+++ ++L+E+
Sbjct: 526 IKEARDLLDEL 536
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 1/305 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL ML C P +LE Y + A L G P+ +YN+++
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY-KQAMKLLDEMRDKGCTPDIVTYNVVV 237
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C G + A + G P+ SY I+++GLC + A +L+ +M KG
Sbjct: 238 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 297
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ +++ L++ LCRK + A ++L ++ GC+P+ + YN ++ FC++ + A
Sbjct: 298 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAF 357
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ M S GC P++VSY TL+ LC G DVA + + + KG +P + +I G
Sbjct: 358 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 417
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK EA +L E++ G P T+ I +C + +E ++ + I+ +T +
Sbjct: 418 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 477
Query: 449 VEAGI 453
A I
Sbjct: 478 YNAII 482
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 12/264 (4%)
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ R L A L SA + P+ + +++ +G + A + PD
Sbjct: 77 LVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLA-----ACGPD 127
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y +M G C QV+ A + + D + TL+ LC + + A +L
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLD 184
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M + C PD+V Y ++ C+ A K+L++M GC P++V+Y +V G+C +G
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A ++++ + S G P+ + ++KG C + ++A ++ E+ + G P+ T+
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304
Query: 416 MIVPQICAGEEMEKLGEVLNEIVK 439
M++ +C +E EVL +I K
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPK 328
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 41/227 (18%)
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++ L R+ +++ A+ L+ PD + L+ L + EA ++L C
Sbjct: 74 LRSLVRRGELDEALRLV----GSARRPDAGTCAALIKKLSASGRTAEARRVL-----AAC 124
Query: 303 NPDIVHYN--------------------------------TVVLGFCREGRAIDACKVLE 330
PD++ YN T++ G C GR +A VL+
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLD 184
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M C+P++V+Y L+ C + + A K + M KG +P + ++ G C G
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+VD+A L+ L G P+ ++ +++ +C E E E++ E+
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML KG VP+++++TTL++ C+ + A ++ +M +
Sbjct: 218 LINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V YN ++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ ++MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M E+G++P+ ++ L+ G C+ V+ A+++ + ML++ +PD ++Y L+ LC+K
Sbjct: 236 DEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M + G PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 12/284 (4%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLID-DILITLKSEHYP--V 128
+ D +A+ +FD A + R S +Y L+ Y L D D LKS + V
Sbjct: 155 EGDIRVAQSVFD-AITKWGLRPSVVSYNTLM-----NGYIRLGDLDEGFRLKSAMHASGV 208
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P ++TY LI + + D A K F MLE P +++ + ++ A
Sbjct: 209 HPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKN-GWVDLAM 267
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+++K +LP+ +YN ++ C GD+ A+ L ++M G+ PD +Y L+ G
Sbjct: 268 EIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGC 327
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++ A + + M+ + D ++YT L++ LC++ + +A K+L M G PD
Sbjct: 328 CKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDT 387
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
Y ++ FC++G K+L++M +G +P++V+Y L+ G
Sbjct: 388 RTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 188/364 (51%), Gaps = 7/364 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
LA + +AS+Q R + Y +I L R + F + ++ ++ E+ + +TP +F
Sbjct: 138 LAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVI 197
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A + + +A++ M ++ C+P +L+ L + + ++ A LF+ ++
Sbjct: 198 LMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGS-VKEAASLFEDM-RY 255
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P+ K + ++ +C G + A + +M + G+ PD+ Y L+ G + ++ A
Sbjct: 256 RWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDA 315
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL++M K P+ SYT L+ SLC+ ++L EA +L M+ GC D+V Y+T++ G
Sbjct: 316 YDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISG 375
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G+ ++L++M G PN V Y+ ++ + + K+ + M G +P
Sbjct: 376 FCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPD 435
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV----PQICAGEEMEKLG 431
S+ + +I+ C +G+V E + E+ +G +P DT+V+++ Q C E E
Sbjct: 436 LSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFK 495
Query: 432 EVLN 435
E++
Sbjct: 496 EMVG 499
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL K + PN SY +++++ C + + A LF +M G DV +Y L+
Sbjct: 315 AYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLIS 374
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++ R +LL++M+ +G P+ + Y ++ + +K++L E +L+ M+ GC P
Sbjct: 375 GFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAP 434
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YNTV+ C+ G + ++ +M S+G P + ++ ++ G +QG A +Y
Sbjct: 435 DLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYF 494
Query: 365 QLMISKGF--SPHFSVSHALIKGFCNVGKVDEA 395
+ M+ +G +P + L+ K++ A
Sbjct: 495 KEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMA 527
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 155/369 (42%), Gaps = 21/369 (5%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+P+ +H S L G K L++ + ++ + + P + Y L+ YA++
Sbjct: 258 KPSVKHFTS------LLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGK 311
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A + M C+P +++ L H L A LF +G + +Y+
Sbjct: 312 MGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHER-LEEATRLFVEMQTNGCQADVVTYS 370
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ FC G I Y L ++M ++G P+ Y+ +M +K ++ +L+ +M
Sbjct: 371 TLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKI 430
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD Y T++ C+ +++E +L M+ G +P + + ++ GF +G ++A
Sbjct: 431 GCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEA 490
Query: 326 CKVLEDMPSNGCL--PNLVSYRTLVGGLCDQGMFDVAKKYMQ-LMISKGFSPHFSVSHAL 382
C+ ++M G P + + L+ L ++AK + SKG + S
Sbjct: 491 CEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIW 550
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I + G V EAC +++ P+ DT+ + M L ++ N EI
Sbjct: 551 IHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKL---------MHGLKKLYNRQFAAEI 601
Query: 443 KGDTRIVEA 451
R + A
Sbjct: 602 TEKVRKMAA 610
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 129/242 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+P+ +YN ++R C A +M +G +PD +Y ++ G C+ S V A
Sbjct: 252 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 311
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+LL+D + KGFVPD ++Y +L+N LC + + A +L + KG PDIV YN++V G
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C +G + A +V+ +M GC P++ +Y ++ GLC G A M I KG+ P
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ LI G+C K+D A ++E + + G AP T+ ++ +C ++ ++ E E
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491
Query: 437 IV 438
++
Sbjct: 492 MI 493
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 36/355 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL------------- 172
P + TY LI+ + ++P A+ R M+ C P N I+
Sbjct: 252 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 311
Query: 173 ELL------------VTH---------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ELL VT+ + A +LF A G+ P+ YN +++
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G I A + N+M E G PD+++Y I++ GLC+ ++ A ++ D + KG++PD
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ TL++ C++ KL A +L+ RM G PD + YN+V+ G C+ G+ + + ++
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M GC PN ++Y L+ C + A K + M +G P + LI GFC G
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 551
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ A + ++L + G + DT+ ++ M ++ +E++ + D+
Sbjct: 552 LEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 606
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 1/293 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+RAL+ F KP N +++ L + + A + + G P+ ++YNI
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCL-QGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C G+IS A + N +G +PDV ++ L+ G C++ +++ A+ L+E M G
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PDT++Y ++LN LC+ K+ E + M +KGC+P+ + YN ++ FCR + +A
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
KV+ M G P+ VS+ TL+ G C G + A Q + KG+S + LI F
Sbjct: 522 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 581
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ A + +E+L G T+ +++ C +++ L E++K
Sbjct: 582 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 634
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + Y L+K L AL+ M E C P + N ++ L N + A
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN-ISDA 415
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ A G LP+ ++N ++ +C + A L +M+E G+ PD +Y ++ G
Sbjct: 416 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 475
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +VN + ++M+ KG P+ ++Y L+ + CR K+ EA K++ +M +G +PD
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V +NT++ GFCR G A + + + G ++ TL+G + +A+K
Sbjct: 536 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 595
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+SKG LI G C VD A L E++K G P T+ ++ +
Sbjct: 596 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 655
Query: 426 EMEKLGEVLNEIVKVEI 442
+ + +++ +VK+ +
Sbjct: 656 RVFQAVGIIHIMVKIGV 672
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 66/372 (17%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV-------THRNYLR- 183
L+ I+ YA + A+ F M F C P N I++ LV H+ Y+R
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112
Query: 184 ------PAFD---------------------------------------LFKSAHKHG-- 196
P L+ H H
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 172
Query: 197 ----------VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
V PN ++N ++ A C GD+ A L K+ +RG+ ++ +Y I ++GL
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ AV L++ M VPD ++Y TL+ LC+K +EA L RM +GC PD
Sbjct: 233 CEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YNT++ G+C+ +A ++L+D G +P+ V+Y +L+ GLC +G + A +
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+KG P V ++L+KG C G + A V+ E+ + G P T+ +++ +C
Sbjct: 352 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 411
Query: 427 MEKLGEVLNEIV 438
+ V+N+ +
Sbjct: 412 ISDATVVMNDAI 423
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
LPD + TF ++++ CK L L A L + ++G+ P+T +Y
Sbjct: 428 LPD--VFTFNTLIDGYCKRLK----------------LDSALQLVERMWEYGIAPDTITY 469
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ C G ++ F +M +G P+ +Y IL++ CR +++ A ++ M
Sbjct: 470 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 529
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G PD +S+ TL+ CR L AY L +++ KG + +NT++ F +
Sbjct: 530 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 589
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+ ++M S G + +YR L+ G C D A ++ MI KGF P S +I
Sbjct: 590 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649
Query: 385 GFCNVGKVDEACGVLEELLKAGEAP-------HEDTWVMIVPQICAGEEMEK------LG 431
+V +A G++ ++K G P + D + P+I + M+K
Sbjct: 650 SLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTY 709
Query: 432 EVLNEIVKVEI 442
EVL+E V+ I
Sbjct: 710 EVLHEGVQSTI 720
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 188/364 (51%), Gaps = 7/364 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
LA + +AS+Q R + Y +I L R + F + ++ ++ E+ + +TP +F
Sbjct: 112 LAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVI 171
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A + + +A++ M + C+P +L+ L + + ++ A LF+ ++
Sbjct: 172 LMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGS-VKEAASLFEEL-RY 229
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P+ K + ++ +C G + A + +M + G+ PD+ Y L+ G + ++ A
Sbjct: 230 RWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDA 289
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL++M KG P+ SYT L+ SLC+ ++L EA ++ M+ GC D+V Y+T++ G
Sbjct: 290 YDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISG 349
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G+ ++L++M G PN V Y+ ++ + + K+ + M G +P
Sbjct: 350 FCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPD 409
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV----PQICAGEEMEKLG 431
S+ + +I+ C +G+V E + E+ +G +P DT+V+++ Q C E E
Sbjct: 410 LSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFK 469
Query: 432 EVLN 435
E++
Sbjct: 470 EMVG 473
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 113/213 (53%), Gaps = 2/213 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL K + G PN SY +++++ C + + A +F +M G D+ +Y L+
Sbjct: 289 AYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLIS 348
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++ R +LL++M+ +G P+ + Y ++ + +K++L E +L+ M+ GC P
Sbjct: 349 GFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAP 408
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YNTV+ C+ G + ++ +M S+G P++ ++ ++ G +QG A +Y
Sbjct: 409 DLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYF 468
Query: 365 QLMISKGF--SPHFSVSHALIKGFCNVGKVDEA 395
+ M+ +G +P + L+ K++ A
Sbjct: 469 KEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMA 501
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 146/336 (43%), Gaps = 12/336 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+P+ +H S L G K L++ + ++ + + P + Y L+ YA+++
Sbjct: 232 KPSVKHFTS------LLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADK 285
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A + M C+P +++ L H L A +F ++G + +Y+
Sbjct: 286 MGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHER-LEEATRVFVEMQRNGCQADLVTYS 344
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ FC G I Y L ++M ++G P+ Y+ +M +K ++ +L+ +M
Sbjct: 345 TLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKI 404
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD Y T++ C+ +++E +L M+ G +P I + ++ GF +G ++A
Sbjct: 405 GCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEA 464
Query: 326 CKVLEDMPSNGCL--PNLVSYRTLVGGLCDQGMFDVAKKYMQ-LMISKGFSPHFSVSHAL 382
C+ ++M G P + + L+ L ++AK + SKG + S
Sbjct: 465 CEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIW 524
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
I + G V EAC ++ P DT+ ++
Sbjct: 525 IHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLM 560
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + G + + L + M GV+PDV +Y +
Sbjct: 155 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSV 214
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG +P+ +++TTL++ C+ ++ A ++ RM +
Sbjct: 215 LINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQS 274
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 275 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 334
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 335 EHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEF 394
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 395 CKKGDVWKGSKLLKEM 410
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 114 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 173
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + +L F L + GVLP+ +Y++++ C + A LF
Sbjct: 174 VVSYNTLMNGYI-RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELF 232
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 233 DEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKK 292
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 293 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 352
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 353 AALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 412
Query: 405 AGEAP 409
G AP
Sbjct: 413 NGHAP 417
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 110/204 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF G++PN ++ ++ C NG + A ++ +M + ++PD+ +Y
Sbjct: 225 MDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNT 284
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + +A DL+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 285 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 344
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G
Sbjct: 345 IRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGS 404
Query: 362 KYMQLMISKGFSPHFSVSHALIKG 385
K ++ M G +P + L+ G
Sbjct: 405 KLLKEMQRNGHAPSVVTYNVLMNG 428
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A DL
Sbjct: 247 FTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCK-KGDLKQAHDLIDEM 305
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRS 365
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PDT +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 366 VDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVL 425
Query: 313 VLG 315
+ G
Sbjct: 426 MNG 428
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 180/372 (48%), Gaps = 14/372 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A +IFD A ++ F TY LI +A IL + SE+ + P + TY
Sbjct: 64 ALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN--LVPDVVTYNS 120
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ ++ D A +++ P + ++ L + A LF S K
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P +YNI++ ++ A+ LF+ + + G+ PD +Y + + GLC+ +V A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ +L+DM KG VPD +S+ ++N LC++K++ EA LL M+ KGC+P+ + +NT++ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC---DQGMFDVAKKYMQLMISKGF 372
CR G+ A ++M G P +V+Y LV GLC +G A MI KG
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P ALI G GK+D+A +L + G P+ T+ ++ +C +EK+ E
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG---LEKVDE 414
Query: 433 VLNEIVKVEIKG 444
L V + KG
Sbjct: 415 ALELFVAMVEKG 426
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 153/296 (51%), Gaps = 7/296 (2%)
Query: 129 TPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+P++ TY I E ALK F S+L+ +P N +++ L+ + + A
Sbjct: 144 SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLL-KEDRVNEA 202
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F+LF KHG+ P+ +Y + + C G + A + M E+G +PDV S+ ++ G
Sbjct: 203 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 262
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ +V+ A LL M KG P+ +S+ TL+ CR K ++A M +G P
Sbjct: 263 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 322
Query: 306 IVHYNTVVLGFCR---EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+V YN +V G C+ EGR +A + + M G +P++V+Y L+ GL G D A++
Sbjct: 323 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 382
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ M +KG P+ ++LI G C + KVDEA + +++ G P T+ I+
Sbjct: 383 LLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 130/238 (54%), Gaps = 6/238 (2%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
KHG PN +YN ++ C G +S A L+ +M + G PDV +Y L+ G C+ ++
Sbjct: 2 RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGEL 61
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A+ + + + +GFVPD ++Y L+N C+ KL EA ++L RM + PD+V YN++
Sbjct: 62 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ--GMFDVAKKYMQLMISK 370
V G C+ GR +A ++ D G PN+++Y TL+ GLC + G+ + K + ++ +
Sbjct: 122 VNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL-KQ 177
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G+ P + LI G +V+EA + L+K G P T+ + + +C +E
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 39/289 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +F A K G +P+ +YN ++ FC + A + +M ++PDV +Y
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR------------------ 283
L+ GLC+ +V+ A L+ D KGF P+ ++Y+TL++ LCR
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 284 ------------------KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+ ++ EA++L + G PD + Y + G C+ GR DA
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+L+DM GC+P++VS+ ++ GLC + D A+ + M +KG SP+ + LI G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
C GK +A +E+LK G P T+ ++V +C + ++ E +
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 346
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 139/258 (53%), Gaps = 7/258 (2%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L++ K G P+ +YN ++ FC G++ A +F+ +RG +PDV +Y L+ G C
Sbjct: 32 LYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFC 91
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +++ A +L+ M+++ VPD ++Y +L+N LC+ ++ EA L+ KG +P+++
Sbjct: 92 KADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVI 148
Query: 308 HYNTVVLGFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y+T++ G CRE R + +A K+ + G P + +Y L+ GL + + A +
Sbjct: 149 TYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 208
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
++ G P I G C G+V++A +L+++ + G P + ++ +C +
Sbjct: 209 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 268
Query: 427 MEKLGEVLNEIVKVEIKG 444
+++ EVL + +E KG
Sbjct: 269 VDE-AEVL--LSGMEAKG 283
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 4/214 (1%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + G P+ +Y L+ GLC +++ A L E M+ G+ PD ++Y TLL+ C+ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L EA K+ +G PD+V YN ++ GFC+ + +A ++L+ M S +P++V+Y +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKA 405
LV GLC G D A+ L++ KGFSP+ LI G C + V EA + +LK
Sbjct: 121 LVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G P T+ +++ + + + + E+ + +VK
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 211
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M GF P+ ++Y LL+ LC ++ +A L RM G +PD+V YNT++ GFC+ G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A K+ + G +P++V+Y L+ G C D A++ +Q M+S+ P ++
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-----AGEEMEKLGEVLNE 436
L+ G C G+VDEA + ++ G +P+ T+ ++ +C E ++ G VL +
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 437 IVKVEI 442
+ E+
Sbjct: 178 GYEPEV 183
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR--NYLRPAFDLFK 190
F LI + +A+ TF+ ML+ KP N +++ L R ++ A LF
Sbjct: 291 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ + G +P+ +Y+ ++ G + A L M +G +P+V +Y L+ GLC
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+V+ A++L M+ KG VPDT++Y T++++
Sbjct: 411 KVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A + ++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T +J L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNXMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+E+ G P + T+ ++ C +E E ++K I+ D
Sbjct: 299 TDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL ++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYVPSVVT 418
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRILMQ-------GLCRK--------SQVNRAVDLL 259
DI + L E G + D +E YR+ + CRK
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++ +E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 169/341 (49%), Gaps = 11/341 (3%)
Query: 64 RVQKLIASQSDPLLAKEIFDY-ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
R+ +LI S+ DP A + S +P F L+ +L + L + + +
Sbjct: 15 RLLELIKSERDPANALSHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLLPR 74
Query: 123 SEHYP-VTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRN 180
H P + S ++ ++ + +PD AL FR + C P + N +L+ V R
Sbjct: 75 MRHRPRFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARR 134
Query: 181 YLRPAFDLFKSAHKHG-----VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
Y D F ++ HG + PN ++YNI++R+ C GD+ A +LF+ + RGV PD
Sbjct: 135 Y--SDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPD 192
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y LM GL + Q++ A+DLL++M N G D + Y LL+ R +A K+
Sbjct: 193 RVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWE 252
Query: 296 RM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
++ + G +P++ Y ++ G C+ GR +A +V M +N + V+Y L+ GLC
Sbjct: 253 QLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRS 312
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G D A + M+ G SV ++LIKGFC VG+ EA
Sbjct: 313 GDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 3/330 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A ++++ R P + +TY +++ L + F ++ + + ++ + LI
Sbjct: 247 AMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILI 306
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
S D A + + M++ N +++ A+ + S G+
Sbjct: 307 HGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC-EVGRTGEAWKFWDSTGFSGI 365
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKM-FERGVMPDVESYRILMQGLCRKSQVNRAV 256
T +YNIM + +G +S A L ++ + PD ++ L+ GLC NRA
Sbjct: 366 RQIT-TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAF 424
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
++LED N G D SY++++N C+ + +A ++ M GC P+ YN ++ GF
Sbjct: 425 EILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGF 484
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
CR + DA K+ +M SNGC P +++Y TL+ GLC + A + M+ +GF P
Sbjct: 485 CRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDI 544
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+LI+G C KVD A + +E+L AG
Sbjct: 545 RTYASLIRGLCRDKKVDVALRIWDEILDAG 574
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 9/293 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFR----SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
F LI E+ +RA + S E + +NR + TH A ++
Sbjct: 407 FGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH-----DANEV 461
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+K+ K G PN+ YN ++ FC I+ A ++ +M G P + +Y L+ GLC+
Sbjct: 462 YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCK 521
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ A L ++ML +GF PD +Y +L+ LCR KK+ A ++ + G D++
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV 581
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
+N ++ G C G+ +A + +M C PNLV+Y TL+ G + G D A ++
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL 641
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
G P + IKG C+ + E +L E+L G P TW ++V +
Sbjct: 642 DNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y AF++ + A G + SY+ M+ FC +G A ++ M + G P+ Y
Sbjct: 419 YANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYN 478
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ G CR S++N A+ + +M + G P ++Y TL++ LC+ +K +EA L M +
Sbjct: 479 ALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLER 538
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PDI Y +++ G CR+ + A ++ +++ G +++ + L+ GLC G D A
Sbjct: 539 GFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEA 598
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
M K SP+ + L+ GF +G +D+A + +L G P T+ +
Sbjct: 599 FCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKG 658
Query: 421 ICAGEEMEKLGEVLNEIVKVEI 442
+C+ + +LNE++ I
Sbjct: 659 LCSCNRTPEGVLLLNEVLATGI 680
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 2/256 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G++ + YN +++ FC G A+ ++ G+ + +Y I+ +GL V+
Sbjct: 327 KAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVS 385
Query: 254 RAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +LL+ + N PD +++ TL++ LC A+++L + G D+ Y+++
Sbjct: 386 EATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSM 445
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ FC++GR DA +V ++M +GC PN Y L+ G C + A K M S G
Sbjct: 446 INRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGC 505
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + LI G C K EA + +E+L+ G P T+ ++ +C ++++
Sbjct: 506 CPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALR 565
Query: 433 VLNEIVKVEIKGDTRI 448
+ +EI+ ++ D +
Sbjct: 566 IWDEILDAGLQVDVMV 581
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 146/316 (46%), Gaps = 5/316 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L K++ + AS P+ T+ LI L Y + +IL ++ + ++ +
Sbjct: 390 LLKQLENDASCSPD----KVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSM 445
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I + + A + +++M++ CKP N ++ + + A ++ +G
Sbjct: 446 INRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFC-RVSKINDAIKIYIEMTSNG 504
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P +YN ++ C A +L +M ERG PD+ +Y L++GLCR +V+ A+
Sbjct: 505 CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVAL 564
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ +++L+ G D + + L++ LC K+ EA+ + MK K C+P++V YNT++ GF
Sbjct: 565 RIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGF 624
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
G A + + NG P++V+Y T + GLC + +++ G P
Sbjct: 625 YEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTV 684
Query: 377 SVSHALIKGFCNVGKV 392
L++ G +
Sbjct: 685 ITWSILVRAVIKYGPI 700
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 5/223 (2%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF----VPDTLSYTTLLNSLCRKKK 286
G P V S+ L+ R + + A + + F P+ +Y +L SLC +
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ A L ++ +G PD V Y+T++ G + + +A +L++MP+ G + V Y
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 347 LVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
L+ G GMF+ A K + QL+ G SP+ + ++ G C +G+ EA V ++
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
T+ +++ +C +++ V +++VK + D +
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV 336
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++S+ + A +L ++ML KG VP+ + +TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F+ I + T +S+ Y +F+ LI Y ES A++ +R E +
Sbjct: 58 FAAIXETXGTQRSDJY-----VFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRK 112
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+LE L+ + Y + + ++ + G + +NI+M FC +GDI JA ++F+ + +
Sbjct: 113 VLEHLMKLK-YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKW 171
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V SY LM G R ++ L ML G PD +Y+ L+N C++ K +A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 231
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M VKG P+ V + T++ G C+ GR A ++ + M S P+L++Y TL+ G
Sbjct: 232 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G A + M KG P LI G C G +D A + +++
Sbjct: 292 LCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLD 351
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+ ++ +C ++L E++ V +K D R
Sbjct: 352 XVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDAR 388
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ + L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M KG PD + Y T++ G C+EG A + + M + V Y
Sbjct: 296 GDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 106/201 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF G++PN + ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 231 ANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 290
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+K + +A L+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 291 GLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRL 350
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y ++ G C EGR++DA K+L +M S G P+ +Y ++ C +G K +
Sbjct: 351 DXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Query: 365 QLMISKGFSPHFSVSHALIKG 385
+ M G P + L+ G
Sbjct: 411 KEMQRDGHVPSVVTYNVLMNG 431
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A L
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK-KGDLKQAHHLIDEM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + D Y L+ GLC + +
Sbjct: 309 SXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRS 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PD +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 369 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Query: 313 VLG 315
+ G
Sbjct: 429 MNG 431
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA + ++M G +
Sbjct: 179 NGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E++ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M+ KG PD ++YTTL
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G +P++V+
Sbjct: 408 QRDGYMPSVVT 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A M+ KG P+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E++
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + G + + L N M G PDV +Y +
Sbjct: 152 IRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ KL A ++ ++ +G
Sbjct: 212 LINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ GFC++G ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + V ALI G C G+ +A +L E+L G P T+ +++ +
Sbjct: 332 EYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKNGDVNTGSKLLKEM 407
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
SR+ F T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 92 SREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ KP N ++ + L F L + H G P+ +Y+
Sbjct: 152 IRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK-MGILDEGFRLKNAMHASGAQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A+ LF++M E+G++P+ ++ L+ G C+ +++ A+++ + +L++
Sbjct: 211 VLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD ++Y TL+ C+K L++ L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 GLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V Y L+ GLC +G A+K ++ M+S G P ++
Sbjct: 331 FEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V+ +L+E+ + G P
Sbjct: 391 FCKNGDVNTGSKLLKEMQRDGHVP 414
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 154/325 (47%), Gaps = 13/325 (4%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---HRNYLRPAFDLFKSA 192
LI++ D A F ++LE K + + L+T +LR A + F+ +
Sbjct: 35 LIQVIVSRKGKDSASAVFAAILE--TKGTQRSDIYVFSGLITAYLESGFLRDALECFRLS 92
Query: 193 --HKHGVLPNT--KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
HK V +T K + +M+ F + + + ++ E G + + ILM C+
Sbjct: 93 REHKFWVPFDTCRKVLDHLMKLKYFK----LVWGFYKEILECGYPASLYFFNILMHRFCK 148
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ ++ A + + + G P +S+ TL+N + L E ++L M G PD+
Sbjct: 149 EGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYT 208
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+ ++ G C+E + +A ++ ++M G +PN V++ TL+ G C G D+A + + ++
Sbjct: 209 YSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQIL 268
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
S+G SP + LI GFC G + + +++E+ G P + T+ ++ C ++E
Sbjct: 269 SQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328
Query: 429 KLGEVLNEIVKVEIKGDTRIVEAGI 453
E ++++ I+ D + A I
Sbjct: 329 TAFEYRKKMIEENIRLDDVVYTALI 353
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY LI + + D A + F MLE P +++ + L A +
Sbjct: 204 PDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGK-LDLAME 262
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++K G+ P+ +YN ++ FC GD+ L ++M +G+ PD +Y L+ G C
Sbjct: 263 IYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ + A + + M+ + D + YT L++ LC++ + +A K+L M G PD
Sbjct: 323 KEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSG 382
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y V+ FC+ G K+L++M +G +P++V+
Sbjct: 383 TYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 113/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM G ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA + ++M G +
Sbjct: 179 NGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E++ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M+ KG PD ++YTTL
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G P++V+
Sbjct: 408 QRDGYKPSVVT 418
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++ ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A M+ KG P+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E++
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 181/387 (46%), Gaps = 25/387 (6%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS----LIDDILITLKS---------- 123
A E+F SR+ + + Y +I L AK ++ L+ D++ L+
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSV 112
Query: 124 -------EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
E TP++F LI ++E L + AL + M + P + N +L+ LV
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ + ++ G PN +Y ++ C GD A+ LF++M E+ + P V
Sbjct: 170 K-KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y IL++GLC +S+++ A + M N G +P+ +Y T+++ C+ +++A +L
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M G P++V + ++ G C+ + A K L DM S G +PN+ Y L+ G C G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + P LIKG C V +++EA G+L+E+ K G P+ T+
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ C MEK EV +++ + I+
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 3/284 (1%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+P++ TY I D +A + F M+E P + IL + + + A
Sbjct: 189 ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEA 247
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ G+LPN +YN MM +C + A L+ +M G++P+V ++ IL+ G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDG 307
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A L DM + G VP+ Y L++ C+ L EA L ++ PD
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+ ++ G C R +A +L++M G LPN V+Y TL+ G C +G + A +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M KG P+ LI G+C GK++ A G+ E++ G P
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 9/316 (2%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
K F L D+++ + + +P T ++T LI+ + A FR+M P
Sbjct: 211 KAFRLFDEMI---EKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266
Query: 169 NRILE--LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +++ + H ++ A +L+ G+LPN ++ I++ C ++ A
Sbjct: 267 NTMMDGYCKIAH---VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M GV+P++ Y L+ G C+ ++ A+ L ++ +PD +Y+ L+ LC +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA LL MK KG P+ V YNT++ G+C+EG A +V M G PN++++ T
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C G + A M+ KG P ALI G G EA + +E+ +AG
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 407 EAPHEDTWVMIVPQIC 422
P+ T ++ +C
Sbjct: 504 LHPNVFTLSCLIDGLC 519
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 164/326 (50%), Gaps = 6/326 (1%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
Q D L A +FD + F + Y ILI L S + + T+++ + P+
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNS--GMLPN 262
Query: 132 LFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
L+TY ++ Y + +AL+ + ML P +++ L + + A
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK-TDEMVSARKFL 321
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
GV+PN YN ++ +C G++S A +L +++ + ++PDV +Y IL++GLC
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ A LL++M KGF+P+ ++Y TL++ C++ + +A ++ +M KG P+I+ +
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
+T++ G+C+ G+ A + +M G LP++V+Y L+ G G A + + M
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEA 395
G P+ LI G C G++ +A
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDA 527
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 20/334 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ ILI L + LI + S + V P++F Y LI Y ++ AL +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMAS--FGVVPNIFVYNCLIDGYCKAGNLSEAL-SLH 356
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
S +E + + LP IL + + + A L + K G LPN +YN ++ +C
Sbjct: 357 SEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++ A + ++M E+G+ P++ ++ L+ G C+ ++ A+ L +M+ KG +PD ++
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL---- 329
YT L++ + +EA++L M+ G +P++ + ++ G C++GR DA K+
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535
Query: 330 ---------EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
++ + C PN V Y L+ GLC G A K+ M G P
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+I+G + + + ++LK G P+ +
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 126/253 (49%), Gaps = 19/253 (7%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L KH +LP+ +Y+I+++ C + A L +M ++G +P+ +Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ + +A+++ M KG P+ ++++TL++ C+ K+ A L M +KG
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y ++ G ++G +A ++ ++M G PN+ + L+ GLC G A
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA- 527
Query: 362 KYMQLMISKG----------------FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
++L ++K SP+ + ALI+G C G++ +A ++ +
Sbjct: 528 --IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585
Query: 406 GEAPHEDTWVMIV 418
G P T ++I+
Sbjct: 586 GLRPDVFTCIVII 598
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 115/280 (41%), Gaps = 14/280 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI L D +L +K + + + LI Y + ++A++ M
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E +P + +++ + A L+ G+LP+ +Y ++ +G+
Sbjct: 430 TEKGIEPNIITFSTLIDGYCK-AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL------------EDMLN 264
A+ L +M E G+ P+V + L+ GLC+ +++ A+ L + L+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 265 KGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ P+ + YT L+ LC ++ +A K M+ G PD+ ++ G R
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D + D+ G +PN YR L G + G A +
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 144/259 (55%), Gaps = 6/259 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F K G+ P+ S+N +M + GD+ + L + M G+ PDV +Y +
Sbjct: 152 MRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR---EAYKLLCRMK 298
L+ GLC++S++N A +L ++M+ G VP+ +++TTL++ C+ + EAYK + R
Sbjct: 212 LINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLR-- 269
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+G +PD++ YNT++ G C+EG A ++++M G P+ ++Y TL+ G C +G +
Sbjct: 270 -QGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A KY + MI + ALI G C G+ A +L E+L G P T+ MI+
Sbjct: 329 TAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMII 388
Query: 419 PQICAGEEMEKLGEVLNEI 437
+ C +++ ++L E+
Sbjct: 389 NEFCKKGDVKMGSKLLKEM 407
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 147/303 (48%), Gaps = 1/303 (0%)
Query: 107 RAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+ KYF + + YP + F L+ + + A F + ++ +P
Sbjct: 113 KLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVV 172
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N ++ + + L F L + H G+ P+ +Y++++ C ++ A LF++
Sbjct: 173 SFNTLMNGYIRLGD-LDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDE 231
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G++P+ ++ L+ G C+ ++ A++ ++ML +GF PD ++Y TL+ LC++
Sbjct: 232 MIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGD 291
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L++A L+ M +KG PD + Y T++ G C+EG A K + M + V+Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTA 351
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ GLC +G A+K ++ M+S G P +I FC G V +L+E+ + G
Sbjct: 352 LISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDG 411
Query: 407 EAP 409
P
Sbjct: 412 HVP 414
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 1/314 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES AL+ FR E ++LE + + Y + + +K
Sbjct: 68 VFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLK-YFKSVWGFYKE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC G++ +A ++F+++ + G+ P V S+ LM G R
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A +L M G P+ V + T
Sbjct: 187 LDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ G A + ++M G P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + ++K + + ++ +C +
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAE 366
Query: 432 EVLNEIVKVEIKGD 445
++L E++ V +K D
Sbjct: 367 KMLREMLSVGLKPD 380
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C G I +A + +M +G PD+ +Y
Sbjct: 222 MNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL----------------------- 278
L+ GLC++ + +A DL+++M KG PD ++YTTL+
Sbjct: 282 LIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKEN 341
Query: 279 ------------NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ LCR+ + A K+L M G PD Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P +V+
Sbjct: 402 KLLKEMQRDGHVPCVVT 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML P N ++ L + L+ A DL
Sbjct: 244 FTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGD-LKQAQDLIDEM 302
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLCR+ Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
A +L +ML+ G PD +YT ++N C+K ++ KLL M+ G P +V
Sbjct: 363 VGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVV 417
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 25/387 (6%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS----LIDDILITLKS---------- 123
A E+F SR+ + + Y +I L AK ++ L+ D++ L++
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112
Query: 124 -------EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
E TP++F LI ++E L + AL + M + P + N +L+ LV
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ + ++ G PN +Y ++ C GD A+ LF++M E+ + P V
Sbjct: 170 -KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y IL++GLC +S+++ A + M N G +P+ +Y T+++ C+ +++A +L
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M G P++V + ++ G C+ + A K L DM S G +PN+ Y L+ G C G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + P LIKG C V +++EA G+L+E+ K G P+ T+
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ C MEK EV +++ + I+
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY I D +A + F M+E P + IL + + + A
Sbjct: 190 SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEAE 248
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F++ G+LPN +YN MM +C + A L+ +M G++P+V ++ IL+ GL
Sbjct: 249 SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGL 308
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A L DM + G VP+ Y L++ C+ L EA L ++ PD+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y+ ++ G C R +A +L++M G LPN V+Y TL+ G C +G + A +
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M KG P+ LI G+C GK++ A G+ E++ G P
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 9/316 (2%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
K F L D+++ + + +P T ++T LI+ + A FR+M P
Sbjct: 211 KAFRLFDEMI---EKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266
Query: 169 NRILE--LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +++ + H ++ A +L++ G+LPN ++ I++ C ++ A
Sbjct: 267 NTMMDGYCKIAH---VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M GV+P++ Y L+ G C+ ++ A+ L ++ +PD +Y+ L+ LC +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA LL MK KG P+ V YNT++ G+C+EG A +V M G PN++++ T
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C G + A M+ KG P ALI G G EA + +E+ +AG
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 407 EAPHEDTWVMIVPQIC 422
P+ T ++ +C
Sbjct: 504 LHPNVFTLSCLIDGLC 519
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 165/326 (50%), Gaps = 6/326 (1%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
Q D L A +FD + F + Y ILI L S + + T+++ + P+
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNS--GMLPN 262
Query: 132 LFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
L+TY ++ Y + +AL+ ++ ML P +++ L + + A
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLC-KTDEMVSARKFL 321
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
GV+PN YN ++ +C G++S A +L +++ + ++PDV +Y IL++GLC
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ A LL++M KGF+P+ ++Y TL++ C++ + +A ++ +M KG P+I+ +
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
+T++ G+C+ G+ A + +M G LP++V+Y L+ G G A + + M
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEA 395
G P+ LI G C G++ +A
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDA 527
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 96/181 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L KH +LP+ +Y+I+++ C + A L +M ++G +P+ +Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ + +A+++ M KG P+ ++++TL++ C+ K+ A L M +KG
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y ++ G ++G +A ++ ++M G PN+ + L+ GLC G A
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 362 K 362
K
Sbjct: 529 K 529
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 7/236 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ ILI L + LI + S + V P++F Y LI Y ++ AL +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMAS--FGVVPNIFVYNCLIDGYCKAGNLSEAL-SLH 356
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
S +E + + LP IL + + + A L + K G LPN +YN ++ +C
Sbjct: 357 SEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++ A + ++M E+G+ P++ ++ L+ G C+ ++ A+ L +M+ KG +PD ++
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
YT L++ + +EA++L M+ G +P++ + ++ G C++GR DA K+
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 131/335 (39%), Gaps = 53/335 (15%)
Query: 59 IGSPC----RVQKLIASQSDP--LLAKEIFDYASRQPNFRH---SNSTYLILILKLGRAK 109
I PC RV KL A+ + P L + S Q R+ SN++ ++L ++ K
Sbjct: 565 ISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRK 624
Query: 110 YFSLIDDILI-------TLKSE------------HYPVTPSLF--TYLIKIYAESNLPDR 148
S ID + TLKS ++ P +F T LI +Y+ +
Sbjct: 625 NPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVAD 684
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSYNI 206
A F + P K L ++ + + RP A LF+ V P+ + +
Sbjct: 685 AHNMFDEI------P-SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTV 737
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDV--ESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ A G + + + + RG+ D+ + I M C + R L+
Sbjct: 738 ALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLV----- 792
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAI 323
+P+ +++ +L + + E + MK P I H+ +V CR G
Sbjct: 793 ---LPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLT 849
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+A + + MP PN V +RTL+G QGM+D
Sbjct: 850 EAYEFILKMPVR---PNAVVWRTLLGACSLQGMWD 881
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MIV +
Sbjct: 338 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P ++ FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G AP
Sbjct: 416 DGHAP 420
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 230 GANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y +V C +G K
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G +P + L+ G
Sbjct: 410 LKEMQRDGHAPSVVTYNVLMNG 431
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 156/313 (49%), Gaps = 5/313 (1%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAF 186
P +F L++ Y ++ + FR + K L +N LL + ++ A+
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVL---KSKGLCVSINACNSLLGGLVKVGWVDLAW 82
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++++ + GV N + NIM+ A C N I + + M E+GV PDV +Y L+
Sbjct: 83 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR+ + A +L++ M KG P +Y ++N LC+ K A +L M G +PD
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN +++ CR +DA ++ ++MPS G +P+LVS+ L+G L G D A KY +
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M + G +P + LI GFC G + EA V +E+L+ G T+ I+ +C +
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322
Query: 427 MEKLGEVLNEIVK 439
+ + E+ E+ +
Sbjct: 323 LSEADELFTEMTE 335
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 134/261 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF+L S G+ P +YN ++ C G A + ++M + G+ PD +Y I
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR + A + ++M ++G VPD +S++ L+ L + L +A K MK G
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y ++ GFCR G +A KV ++M GC+ ++V+Y T++ GLC + M A
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +G P F LI G+ G +++A + E +++ P T+ ++
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C G EMEK+ E+ N+++ I
Sbjct: 388 CKGSEMEKVNELWNDMISRRI 408
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 1/287 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI + + + ALK MLE C N IL L + L A +LF
Sbjct: 274 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK-MLSEADELFTE 332
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ + +G+++ A TLF M +R + PDV +Y L+ G C+ S+
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ + +L DM+++ P+ +SY L+N C + EA++L M KG I+ NT
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+V G+CR G A+ A + L +M G +P+ ++Y TL+ G + D A + M + G
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + ++ GF G++ EA ++ ++++ G P T+ ++
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 2/317 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
LK P T + L++ N+ D A + F M P + ++ LL +
Sbjct: 194 LKIGMSPDTATYNILLVECCRNDNMMD-AERIFDEMPSQGVVPDLVSFSALIGLL-SKNG 251
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A F+ G+ P+ Y I++ FC NG +S A + ++M E+G + DV +Y
Sbjct: 252 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ GLC++ ++ A +L +M +G PD ++TTL+N + + +A L M +
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
PD+V YNT++ GFC+ ++ DM S PN +SY L+ G C+ G A
Sbjct: 372 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 431
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M+ KGF + ++KG+C G +A L +L G P T+ ++
Sbjct: 432 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 491
Query: 421 ICAGEEMEKLGEVLNEI 437
E M++ ++N++
Sbjct: 492 FIKEENMDRAFALVNKM 508
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 38/352 (10%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E V P + TY LI Y L + A + SM KP N I+ L Y
Sbjct: 124 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
LR A + K G+ P+T +YNI++ C N ++ A +F++M +GV+PD+ S
Sbjct: 184 LR-AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242
Query: 239 --------------------------------YRILMQGLCRKSQVNRAVDLLEDMLNKG 266
Y IL+ G CR ++ A+ + ++ML +G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
V D ++Y T+LN LC++K L EA +L M +G PD + T++ G+ ++G A
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ E M P++V+Y TL+ G C + + MIS+ P+ LI G+
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
CN+G V EA + +E+++ G T IV C K E L+ ++
Sbjct: 423 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG + +LL L + + A+++ + G ++ N ++ C+ + +
Sbjct: 56 KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 115
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
L DM G P++V+Y TL+ C QG+ + A + M M KG P +A+I
Sbjct: 116 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 175
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C GK A GVL+E+LK G +P T+ +++ + C + M + +E+ +
Sbjct: 176 GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 235
Query: 445 DTRIVEAGIGL 455
D A IGL
Sbjct: 236 DLVSFSALIGL 246
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 246 LCRKSQVNRAVDLLEDML----NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ RKS V+R V+++E ++ N G P L + L+ + + +KLRE + +K KG
Sbjct: 1 MVRKSGVSR-VEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKG 57
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
I N+++ G + G A ++ +++ +G N+ + ++ LC + K
Sbjct: 58 LCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTK 117
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M KG P + LI +C G ++EA +++ + G P T+ I+ +
Sbjct: 118 SFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGL 177
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C + + VL+E++K+ + DT
Sbjct: 178 CKTGKYLRAKGVLDEMLKIGMSPDT 202
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 162/318 (50%), Gaps = 3/318 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +++Y +I ++++N D A + F M P N ++ L + R L AF+
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCS-RGKLELAFE 187
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K G P+ +Y I++ A G I+ A LF+++ RG+ PD+ +Y +++G+C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +RA+D + + +G PD +SY LL S K + + +L+ M + GC P++V
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
++ ++ FCREGR +A VLE M G P+ SY L+ C +G D+A +Y++ M
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P + ++ C G D A V E+L + G P + + + +
Sbjct: 368 VSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427
Query: 428 EKLGEVLNEIVKVEIKGD 445
K E+++E+++ I D
Sbjct: 428 IKALEMISEMIRKGIDPD 445
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 5/328 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI--YAESNLPDRALKTFR 154
+Y +I +A + + ++S + +P + TY I I + A +
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGF--SPDVVTYNIMIGSLCSRGKLELAFEVMD 190
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+L+ CKP ++E + + A +LF G+ P+ +YN ++R C
Sbjct: 191 ELLKDGCKPSVITYTILIEATILE-GRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G A + RG PDV SY IL++ KS+ L++DM+ G P+ +++
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+ L++S CR+ ++REA +L MK KG PD Y+ ++ FC+EGR A + LE M S
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+GCLP++V+Y T++ LC G D+A + + G P + + + G +
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A ++ E+++ G P E T+ ++ +C
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLC 457
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 176/376 (46%), Gaps = 16/376 (4%)
Query: 70 ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKL-GRAKY---FSLIDDILITLKSEH 125
A+Q D A ++FD R F TY I+I L R K F ++D++L
Sbjct: 144 ANQIDS--ANQVFDRM-RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL------K 194
Query: 126 YPVTPSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
PS+ TY I I A + AL+ F ++ +P N I+ + R
Sbjct: 195 DGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDR 254
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A D + G P+ SYNI++R+F L M G P+V ++ IL+
Sbjct: 255 -ALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
CR+ +V AV++LE M KG PD+ SY L+++ C++ +L A + L +M GC
Sbjct: 314 SSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCL 373
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDIV+YNT++ C+ G A A V E + GC P + +Y T+ L G A +
Sbjct: 374 PDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEM 433
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ MI KG P ++LI C G VDEA G+L ++ P ++ +++ +C
Sbjct: 434 ISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCK 493
Query: 424 GEEMEKLGEVLNEIVK 439
+ + E+L +V+
Sbjct: 494 AHRVFEGIELLITMVE 509
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 6/321 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L+TY +I+ + + DRAL R + C P N +L + +
Sbjct: 234 PDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW-EDGER 292
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K G PN +++I++ +FC G + A + M E+G+ PD SY L+ C
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ A++ LE M++ G +PD ++Y T+L +LC+ A + ++ GC P +
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT+ G I A +++ +M G P+ ++Y +L+ LC G+ D A + M
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEE 426
+ F P + ++ G C +V E +L +++ G P+E ++V+++ I AG
Sbjct: 473 EATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWR 532
Query: 427 MEKLGEVLNEIVKVE-IKGDT 446
E + E+ N + ++ I GD+
Sbjct: 533 AEAM-ELANSLYRLGVISGDS 552
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR + N ++ LE +++KGF PD + T L+ + L++A +++ ++ G
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD+ YN ++ GF + + A +V + M S G P++V+Y ++G LC +G ++A
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M ++ G P LI+ G+++EA + +EL+ G P T+ I+ I
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 422 CAGEEME 428
C E ME
Sbjct: 247 CK-EGME 252
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ ILI R ++L +K + +TP ++Y LI + + D A++
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKG--LTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ C P N IL L A D+F+ + G P ++YN M A
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKF-GCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSC 424
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G+ A + ++M +G+ PD +Y L+ LCR V+ A+ LL DM F P +S+
Sbjct: 425 GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISF 484
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+L +C+ ++ E +LL M KGC P+ Y ++ G G +A
Sbjct: 485 NIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 13/334 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF---KSAHKHGVLPNTKSYNIMMRAFC 212
M E C P N +L+ L N + A +L G P+ SYN ++ F
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 213 FNG--------DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
G + A + N M + GVMPD +Y ++ G C Q A+ L+ M +
Sbjct: 213 KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 272
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G P+ ++Y++L+N LC+ + EA K+ M +G PDI Y T++ G C+EGR I+
Sbjct: 273 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIE 332
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+ K+ + M G P++++Y TL+ G C G D A K + M+S G P LI
Sbjct: 333 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G+C V ++D+A + +E++ +G +P+ T+ +I+
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 426
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 1/275 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
V F I+ + D+A++ +M++ P N IL + + A
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEAIG 265
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
K GV PN +Y+ +M C NG + A +F+ M +RG+ PD+ +YR L+QG C
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC 325
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V + L + M+ G PD ++Y TL++ C K+ EA KLL M G PDIV
Sbjct: 326 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 385
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T++ G+CR R DA + ++M S+G PN+++Y ++ GL AK+ +
Sbjct: 386 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 445
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G S + ++ G C DEA + + L
Sbjct: 446 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 480
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 171/379 (45%), Gaps = 13/379 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ FR T+ L+ L K S DI++ +E P +F+Y L+K + N
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE-LGCIPDVFSYNNLLKGLCDENR 178
Query: 146 PDRALKTFRSMLEFNCKPLPKQL---NRILELLVTH-------RNYLRPAFDLFKSAHKH 195
AL+ M + P + N +L + A ++ + K+
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKN 238
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV+P+ +YN ++ +C +G A KM GV P+V +Y LM LC+ + A
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ + M +G PD +Y TLL C++ ++ E+ KL M G PDI+ YNT++ G
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C G+ +A K+L M S G P++V+Y TL+ G C D A + M+S G SP+
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ +++G + + A + + K+G T+ +I+ +C ++ +
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 478
Query: 436 EIVKVEIKGDTRIVEAGIG 454
+ +++ +TR IG
Sbjct: 479 NLCLTDLQLETRTFNIMIG 497
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 144/326 (44%), Gaps = 3/326 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P TY ++ Y S P A+ T + M +P + ++ L + A
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE-A 298
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F S K G+ P+ +Y +++ C G + + LF+ M GV PD+ +Y L+ G
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C +++ A LL M++ G PD ++Y TL+N CR ++ +A L M G +P+
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I+ YN ++ G R A ++ + +G L +Y ++ GLC + D A + Q
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 478
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ + +I G++DEA + G P T+ ++ +
Sbjct: 479 NLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 538
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEA 451
+E+L ++ + + D+R++ +
Sbjct: 539 SLEELDDLFLSMEENGCSADSRMLNS 564
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 58/343 (16%)
Query: 168 LNRILELLVTHRNYLRPA-----FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
LNR L + H PA ++ A V P +Y I++ C G + + +
Sbjct: 58 LNRALADVARHS----PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFA 113
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSL 281
+ ++G D ++ L++GLC + + A+D+ L M G +PD SY LL L
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 282 CRKKKLREAYKLLCRM---KVKGCNPDIVHYNTVVLGFCREG-------RAID------- 324
C + + +EA +LL M + G PD+V YNTV+ GF +EG +A+D
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLN 233
Query: 325 -----------------------------ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
A L+ M S+G PN+V+Y +L+ LC G
Sbjct: 234 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 293
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A+K M +G P + L++G C G+V E+ + + +++ G P T+
Sbjct: 294 RSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYN 353
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
++ C +M++ ++L +V V +K D IV G + Y
Sbjct: 354 TLIDGCCLAGKMDEATKLLASMVSVGVKPD--IVTYGTLINGY 394
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 133/317 (41%), Gaps = 22/317 (6%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A++IFD +++ +TY L+ K GR + D+++ + V P + T
Sbjct: 298 ARKIFDSMTKR-GLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIG-----VKPDIIT 351
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR-----PAFD 187
Y LI + D A K SM+ KP I+ Y R A
Sbjct: 352 YNTLIDGCCLAGKMDEATKLLASMVSVGVKP------DIVTYGTLINGYCRVSRMDDALA 405
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK GV PN +YNI+++ + A L+ + + G ++ +Y I++ GLC
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + + A+ + +++ +T ++ ++ +L + ++ EA L G PD+
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 525
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ + +G + + M NGC + ++V L +G A Y+ ++
Sbjct: 526 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 585
Query: 368 ISKGFSPHFSVSHALIK 384
K FS S + L++
Sbjct: 586 DEKHFSLEASTASFLLE 602
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 3/268 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY L++ + + + K F M+ KP N +++ + A
Sbjct: 312 PDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA-GKMDEATK 370
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L S GV P+ +Y ++ +C + A LF +M GV P++ +Y I++QGL
Sbjct: 371 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 430
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ A +L + G + +Y +L+ LC+ EA ++ + + +
Sbjct: 431 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 490
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ + GR +A + +NG +P++ +Y + L +QG + M
Sbjct: 491 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 550
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G S + +++++ G + A
Sbjct: 551 EENGCSADSRMLNSIVRKLLQRGDITRA 578
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 178/343 (51%), Gaps = 3/343 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
L F +AS+QP +RHS Y +I LG+ + F + ++ ++ E+ V+P +F
Sbjct: 104 LGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVV 163
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A + + +A++ M ++ C+P +L+ L + + ++ A LF+
Sbjct: 164 LMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGS-VKEAASLFEDMRIR 222
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P K + ++ +C G + A + ++ E G PD+ Y L+ G ++ A
Sbjct: 223 -FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDA 281
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL++M K P+ +S+TTL+ +LC KKK+ EA ++ M+ GC D V Y T++ G
Sbjct: 282 YDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISG 341
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G+ ++L++M G +PN ++Y ++ + + + M+ M G +P
Sbjct: 342 FCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPD 401
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ + +I+ C +G++ E V E+ G +P DT+V+++
Sbjct: 402 LNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMI 444
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++MR F + A + ++M + G PD + L+ LC+ V A L EDM
Sbjct: 161 FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMR 220
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ F P +T+LL CR+ KL EA +L +++ G PDIV YN ++ G+ G+ +
Sbjct: 221 IR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMV 279
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA +L++M C PN++S+ TL+ LC + + A + M S G LI
Sbjct: 280 DAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLI 339
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFC GK+ + +L+ +++ G P+ T++ I+ EE+E+ E++ E+ K+
Sbjct: 340 SGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCT 399
Query: 444 GDTRI 448
D I
Sbjct: 400 PDLNI 404
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 46/304 (15%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL K + PN S+ +++A C + A +F +M G D +Y L+
Sbjct: 281 AYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLIS 340
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++++ +LL++M+ +G +P+ ++Y ++ + +K++L E +L+ M+ GC P
Sbjct: 341 GFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 400
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN V+ C+ G + +V +M + G P L ++ ++ G Q A ++
Sbjct: 401 DLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFF 460
Query: 365 QLMISKGF--SPHFSVSHALIKGF--------------------CNV------------- 389
+ M+ +G +P + L+ C++
Sbjct: 461 KEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALF 520
Query: 390 --GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
G V EAC +++ AG P DT+ + M L ++ N + EI R
Sbjct: 521 SNGHVKEACSYCLDMMDAGVMPQPDTFAKL---------MRGLRKLYNRQIAAEITEKVR 571
Query: 448 IVEA 451
+ A
Sbjct: 572 KMAA 575
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 166/314 (52%), Gaps = 3/314 (0%)
Query: 117 ILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L+ K Y P+ TY ++ + +S A++ R M E N K + + I++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L H + L AF+LF G+ N +YNI++ FC G L M +R + P
Sbjct: 273 LCKHGS-LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V ++ +L+ ++ ++ A +L ++M+++G PDT++YT+L++ C++ L +A +++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M KGC+P+I +N ++ G+C+ R D ++ M G + + V+Y TL+ G C+
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G +VAK+ Q M+S+ P+ L+ G C+ G+ ++A + E++ K+ +
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 415 VMIVPQICAGEEME 428
+I+ +C +++
Sbjct: 512 NIIIHGMCNASKVD 525
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 130/254 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF K G PNT +++ ++ C G +S A L ++M E G PD+ + L+
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A+ L++ M+ G P+ ++Y +LN +C+ + A +LL +M+ +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y+ ++ G C+ G +A + +M G N+++Y L+GG C+ G +D K +
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI + +P+ LI F GK+ EA + +E++ G AP T+ ++ C
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 425 EEMEKLGEVLNEIV 438
++K ++++ +V
Sbjct: 382 NHLDKANQMVDLMV 395
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 5/303 (1%)
Query: 146 PDRALKTFRSMLEFNCKPLPKQLN--RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
D A+ FR M+ + +PLP ++ R+ + + Y L K G+ N +
Sbjct: 69 ADDAIDLFRDMI--HSRPLPTVIDFSRLFSAIAKTKQY-DLVLALCKQMELKGIAHNLYT 125
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+IM+ FC + +A++ K+ + G P+ ++ L+ GLC + +V+ A++L++ M+
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G PD ++ TL+N LC K EA L+ +M GC P+ V Y V+ C+ G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A ++L M + V Y ++ GLC G D A M KG + + + LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFCN G+ D+ +L +++K P+ T+ +++ ++ + E+ E++ I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 444 GDT 446
DT
Sbjct: 366 PDT 368
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 5/311 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K+ SL + + + E +T ++ TY LI + + D K R M++ P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++ V LR A +L K G+ P+T +Y ++ FC + A +
Sbjct: 332 NVVTFSVLIDSFVKE-GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
+ M +G P++ ++ IL+ G C+ ++++ ++L M +G V DT++Y TL+ C
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
KL A +L M + P+IV Y ++ G C G + A ++ E + + ++
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C+ D A + KG P + +I G C G + EA + ++
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 404 KAGEAPHEDTW 414
+ G AP D W
Sbjct: 571 EDGHAP--DGW 579
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N+L A + G PN +++NI++ +C I LF KM RGV+ D +Y
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+QG C ++N A +L ++M+++ P+ ++Y LL+ LC + +A ++ +++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
DI YN ++ G C + DA + +P G P + +Y ++GGLC +G
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A+ + M G +P + LI+ G ++ ++EEL + G + T M++
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 420 QICAG 424
+ G
Sbjct: 622 MLSDG 626
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 3/244 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY +R+ + A LF M +P V + L + + Q + + L + M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG + + + ++N CR +KL A+ + ++ G P+ + ++T++ G C EGR
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A ++++ M G P+L++ TLV GLC G A + M+ G P+ +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ C G+ A +L ++ + + +I+ +C ++ + NE+ E+
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EM 291
Query: 443 KGDT 446
KG T
Sbjct: 292 KGIT 295
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 139 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 198
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 199 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M P+ ++Y TL+ G C +G D A
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAF 318
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 319 EHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEF 378
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 379 CKKGDVWKGSKLLKEM 394
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 55 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 113
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 173
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M K
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKE 293
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ E + ++ +C
Sbjct: 294 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 353
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V +K D+R
Sbjct: 354 KMLREMLNVGLKPDSR 369
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ F T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 79 TREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD 138
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 139 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYS 197
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 198 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 257
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A+ L+ M +K PD + Y T++ G C+EG A
Sbjct: 258 SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSA 317
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M++ G P +I
Sbjct: 318 FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINE 377
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V + +L+E+ + G P
Sbjct: 378 FCKKGDVWKGSKLLKEMQRDGHVP 401
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 152 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 210
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 211 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 270
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M K PD ++YTTL++ C++ L A++ RM +
Sbjct: 271 YGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 330
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M + G P+ +Y ++ C +G K
Sbjct: 331 LDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKL 390
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 391 LKEMQRDGHVPSVVTYNVLMNG 412
>gi|125532572|gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
Length = 508
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 162/340 (47%), Gaps = 9/340 (2%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P LA + F +A Q +RH S Y +++ + +L + + PV+ F
Sbjct: 163 PRLAYKFFLWAEDQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFH 222
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + L R ++ F FN +P N IL L+T Y L + H+
Sbjct: 223 LLVCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQY-----SLIEWVHQ 277
Query: 195 ----HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G P+ +YN++MRA G ++ + L ++M + G+ PD+ +Y +L+ L +
Sbjct: 278 KMIAEGHSPDVLTYNVVMRAKYMLGKLNQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGD 337
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A++LL M + G VP L +T L++ L R L M KGC PD+V Y
Sbjct: 338 KPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYT 397
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G+ G +A K +DM G LPN+ +Y +++ GLC G FD A ++ M S+
Sbjct: 398 VMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESR 457
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G +P+F+V L+ N GK EA +++ + G H
Sbjct: 458 GCTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLH 497
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 122/298 (40%), Gaps = 36/298 (12%)
Query: 176 VTHRNYLRPAFDLFKSAH-KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V Y R A+ F A + G T YN++++ F G++ + L M ++G+
Sbjct: 157 VNRARYPRLAYKFFLWAEDQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPV 216
Query: 235 DVESYRILMQGLCRKSQVNRAVDLL----------------------------------- 259
++ +L+ R R V+
Sbjct: 217 SSRTFHLLVCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVH 276
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M+ +G PD L+Y ++ + KL + +KLL M G PD+ YN ++ +
Sbjct: 277 QKMIAEGHSPDVLTYNVVMRAKYMLGKLNQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKG 336
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ + A +L M GC+P ++ + L+ GL G + K + M+ KG P
Sbjct: 337 DKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCY 396
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I G+ G+ DEA +++L G+ P+ T+ ++ +C E +K +L ++
Sbjct: 397 TVMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDM 454
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 9/258 (3%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
N+R +++ ++ L + +SLI+ + + +E + +P + TY + + A+ L
Sbjct: 248 NYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGH--SPDVLTYNVVMRAKYMLG--K 303
Query: 150 LKTFRSMLEFNCK----PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
L F +L+ K P N +L +L L A +L G +P +
Sbjct: 304 LNQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPL-AALNLLNYMSDVGCVPTVLHFT 362
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ G++ F++M ++G PDV Y +++ G + + A +DML +
Sbjct: 363 NLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLR 422
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G +P+ +Y +++ LC + +A LL M+ +GC P+ Y+T+V G+ +A
Sbjct: 423 GQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEA 482
Query: 326 CKVLEDMPSNGCLPNLVS 343
+++ M + G +L+S
Sbjct: 483 NNIIQYMTNKGHYLHLLS 500
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 139 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 198
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 199 LINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 259 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 318
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MIV +
Sbjct: 319 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEF 378
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 379 CKKGDVWKGSKLLKEM 394
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 98 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 157
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 158 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLF 216
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 217 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 276
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 277 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 336
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P ++ FC G V + +L+E+ +
Sbjct: 337 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 396
Query: 405 AGEAP 409
G AP
Sbjct: 397 DGHAP 401
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 152 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 210
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 211 GANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 270
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 271 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 330
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y +V C +G K
Sbjct: 331 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL 390
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G +P + L+ G
Sbjct: 391 LKEMQRDGHAPSVVTYNVLMNG 412
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 189/397 (47%), Gaps = 22/397 (5%)
Query: 61 SPCRVQK-LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL- 118
+P RV+ L+ Q D +L+ E F++ + H+ T+ +++ L + + F + IL
Sbjct: 58 TPFRVKHILLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILK 117
Query: 119 -------ITLKSEHYPV----------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
I L + + +P +F L K A A TF M +
Sbjct: 118 SVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGF 177
Query: 162 KPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P + N L LL HR + AF +K + + PN + N++MRAFC +G + A
Sbjct: 178 LPTVESCNAYLSSLLDLHRVDIALAF--YKEMRRCRISPNVYTRNMVMRAFCKSGKLEKA 235
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+F +M G+ P+ SY L+ G CRK +N AV L M KG + +++ +L++
Sbjct: 236 VQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDG 295
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C++ KL EA K+ MKV P+ + YNT++ G + G + ++ E+M NG +
Sbjct: 296 FCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKAD 355
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++Y L+ GLC +G A ++ + + P+ S ALI G C D A + +
Sbjct: 356 ILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYK 415
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+++ G P+E T+ M+V C E+ E VL E+
Sbjct: 416 SMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEM 452
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 16/345 (4%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLIL-------ILKLGRAKYFSLID----DILITL 121
S P + +F + FR++ T+L + ++ A SL+D DI +
Sbjct: 144 SSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAF 203
Query: 122 KSE--HYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
E ++P+++T +++ + +S ++A++ F M P N ++ +
Sbjct: 204 YKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLI-MGYC 262
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ L A L S GV N ++N ++ FC G + A +F++M V P+
Sbjct: 263 RKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTI 322
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ G + L E+M G D L+Y L+ LC++ K ++A ++ +
Sbjct: 323 TYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKEL 382
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ P+ ++ ++ G C + A ++ + M GC PN ++ LV C F
Sbjct: 383 DKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDF 442
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ A + M + F+P V + G C GK A + EL
Sbjct: 443 EGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSEL 487
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV--PDTL----------------SYTTL 277
+E++ +++ L + + A +L+ +L KGF+ PD L + +L
Sbjct: 93 LETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSL 152
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+L KK R A +MK G P + N + R A ++M
Sbjct: 153 FKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRI 212
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
PN+ + ++ C G + A + + M S G SP+ + + LI G+C G ++ A
Sbjct: 213 SPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVK 272
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ + G + T+ ++ C ++ + +V +E+ + + +T
Sbjct: 273 LKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT 321
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 53/118 (44%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A + K K ++PN +++ ++ C + A+ L+ M G P+ +++ +L
Sbjct: 373 KKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNML 432
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ C+ A +L +M + F P + + + + LC K A KL +K +
Sbjct: 433 VSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKAR 490
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 188/379 (49%), Gaps = 14/379 (3%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A +F A HS +Y ++ L + SL +L +++ + T + +
Sbjct: 217 PLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYN 276
Query: 135 YLIKIY-AESNLP-DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
L+K + +++ +P D A++ FR++ KP N +++ L R L A DLF
Sbjct: 277 VLVKAHCSDAAVPIDDAVRVFRNI----PKPDACSYNTVIDGLC-RRGRLPEARDLFAEM 331
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G P +Y ++ A LF++M RG+MP+V +Y L+ GLC+ +
Sbjct: 332 IANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRA 391
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
AV+LL+ M+ + +P+T++Y+++++ LC++ L +A ++L RM+++G PD + +
Sbjct: 392 ASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKL 451
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR-------TLVGGLCDQGMFDVAKKYMQ 365
++G C GRA++A L++M G PN +++ +V LC +G A + Q
Sbjct: 452 IVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQ 511
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M ++G S + H L++ +++A V+ ++L P +TW IV + +
Sbjct: 512 SMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKK 571
Query: 426 EMEKLGEVLNEIVKVEIKG 444
++ +G V V G
Sbjct: 572 KLRAVGSVQGPCAAVAKVG 590
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 189/398 (47%), Gaps = 28/398 (7%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRH--SNSTYLILILKLGRAKYFSLIDD------ 116
+ +L+ ++ DP A +FD A+ +P+ +ST L SL+
Sbjct: 119 LHRLVRAERDPRRALALFDAATARPSSASPPDDSTAAAAAPVLPSRDTVSLLTSRLASAS 178
Query: 117 ------ILITLKSEHYPVTPSL---FTYLIKIYAESNLPDRALKTFRSMLEFNCKP-LPK 166
L++ E +P L F L++ Y+ ++ P AL FRS P +
Sbjct: 179 LLPLASSLLSRSRELFPSPGELEPPFLSLLRAYSRAHQPLAALHLFRSAPSALGLPHSAR 238
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+L LV H ++L A L G P T +YN++++A C + + I + +
Sbjct: 239 SYTAVLAALVAH-SHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAV--R 295
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+F PD SY ++ GLCR+ ++ A DL +M+ G P ++YTTL++ L R+
Sbjct: 296 VFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREAC 355
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+A KL M +G P++V Y++++ G C+ GRA A ++L+ M LPN ++Y +
Sbjct: 356 FDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSS 415
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC +G A + + M +G P + LI G C+ G+ EA L+E+ AG
Sbjct: 416 VIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAG 475
Query: 407 EAPHEDTWVM-------IVPQICAGEEMEKLGEVLNEI 437
P+ TW + +V +C+ E+ + +V +
Sbjct: 476 IRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSM 513
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK--LR 288
G+ SY ++ L S ++ A LL DM GF P T +Y L+ + C +
Sbjct: 232 GLPHSARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPID 291
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+A ++ + PD YNTV+ G CR GR +A + +M +NG P +V+Y TL+
Sbjct: 292 DAVRVFRNIP----KPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLI 347
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
L + FD A K M +G P+ +LI G C G+ A +L+ ++K +
Sbjct: 348 HWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKL 407
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
P+ T+ ++ +C + LG+ + + ++ ++G R +AG+
Sbjct: 408 PNTITYSSVIDGLC---KEGCLGQAMEILDRMRLQG--RKPDAGL 447
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + L +R + M E C P + I++ + +L A ++
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG-ICKEGHLEVANEILNRM 312
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G+ PN YN +++ C A L ++MF++ D ++ IL+ C+ V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+R ++LLE ML+ G +PD ++YTT++N C++ + EA LL M GC P+ V Y V
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C GR +DA +++ M GC PN V++ TL+ LC +G+ + A + ++ M+ G
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP +I G GK +EA +L ++ G +P+ + I + + K+ +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 433 VLNEIVKVEIKGDTRIVEAGI 453
+ + I I+ D + A I
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVI 573
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ E D A+ R + F C+ N +L+ L + + +L +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW-GDVEELMDEMVRV 245
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
PN ++N ++ C NG + + +M E G PD+ Y ++ G+C++ + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L M + G P+ + Y T+L LC ++ +EA +LL M K C D V +N +V
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G ++LE M S+GC+P++++Y T++ G C +G+ D A ++ M S G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++KG C+ G+ +A ++ ++++ G P+ T+ ++ +C +E+ E+L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 436 EIV 438
+++
Sbjct: 486 QML 488
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +T+ +++ AL+ M C P+P + ILE + R
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF-RN 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ + ++ H G +T + N+++ A C G + A L K+ G D+ SY +++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + +L+++M+ P+ +++ TL+ LCR +++L +M GC P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------- 351
DI Y T++ G C+EG A ++L MPS G PN+V Y T++ GL
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 352 ----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
C G+ D + ++ M+S G P +I GFC
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E+++++++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y ++ L A+ + +++L + + P+ F
Sbjct: 304 VANEILN---RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ ML C P ++ + A L KS
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF-CKEGLIDEAVMLLKSMSS 419
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C G A L ++M ++G P+ ++ L+ LC+K V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC + D A + M+S G P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LIKG + G EA +L EL G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN M+ +C G ++ A L + V P+ ++ +++GLC + ++ A+++L++M
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG P Y +L + CR R + ++L M KGC D + N V+ C +G
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + GC ++VSY ++ GLC + ++ M M+ +P+ + L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I C G + VL ++ + G P + I+ IC +E E+LN +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY +I + + L D A+ +SM CKP +L+ L + ++ A +
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD-AEE 447
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G PN ++N ++ C G + A L +M G PD+ SY ++ GL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+ + A++LL M+NKG P+T+ Y+++
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAV 567
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++SLC++ + A M GC P+ Y ++ G EG A +A ++L ++
Sbjct: 568 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627
Query: 333 PSNGCL 338
S G L
Sbjct: 628 CSRGAL 633
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y ++ G CR Q+ A L + P+ ++ ++ LC + ++ +A ++L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KGC P Y+ ++ CR G ++ +VLE M + GC + + ++ +C+QG
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A ++ + G +A++KG C + + +++E+++ AP+ T+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ +C E++ EVL ++ + D R+
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 IRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML++G VP+ +++TTL++ C+ KL A ++ +M +G
Sbjct: 212 LINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD + YNT++ G C++G A + ++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 FSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ +++ +
Sbjct: 332 EYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C +++ ++L E+
Sbjct: 392 CKNGDVKMGSKLLKEM 407
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F + ++ +P
Sbjct: 111 LMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A+ LF
Sbjct: 171 VVSFNTLMNGYIKLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +RG++P+ ++ L+ G C+ +++ A+++ + ML++GF PD ++Y TL+ LC+K
Sbjct: 230 DEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L +A L M +KG PD + Y T++ G C+EG A + + M + VSY
Sbjct: 290 GDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P ++ FC G V +L+E+ +
Sbjct: 350 TALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQR 409
Query: 405 AGEAP 409
G P
Sbjct: 410 DGHVP 414
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 154/316 (48%), Gaps = 3/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP-KQLNRILELLVTHRNYLRPAFDLFK 190
+F+ LI Y ES A++ FR E N +P ++LE L+ + Y + + +K
Sbjct: 68 VFSGLITAYLESGFLRDAIECFRLTRE-NKYWVPFDTCRKVLEHLMKLK-YFKLVWSFYK 125
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ + +NI+M FC G+I +A ++F+ + + G+ P V S+ LM G +
Sbjct: 126 EILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ L M G PD +Y+ L+N LC++ K+ EA+KL M +G P+ V +
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFT 245
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T++ G C+ G+ A ++ + M S G P+ ++Y TL+ GLC +G AK M K
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK 305
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P LI G C G ++ A + ++K + ++ ++ +C
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDA 365
Query: 431 GEVLNEIVKVEIKGDT 446
++L E++ V +K DT
Sbjct: 366 EKMLREMLSVGLKPDT 381
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D A K F ML+ P +++ + L A
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK-LDLA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++K G P+ +YN ++ C GD+ A L ++M +G+ PD +Y L+ G
Sbjct: 261 MEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A + + M+ + D +SYT L++ LC++ + +A K+L M G PD
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPD 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y V+ FC+ G K+L++M +G +P +++
Sbjct: 381 TGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 IRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL+ C+ +++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A VL E+L G P T+ MI+ +
Sbjct: 332 EHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 111 LMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 171 VVSFNTLMNGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 230 DEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 290 GDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G + A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 350 TALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 405 AGEAP 409
G P
Sbjct: 410 DGHVP 414
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D A F ML+ P ++ +R + A
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRR-VDLA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++K + P+ +YN ++ C GD+ A+ L ++M +G+ PD +Y L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A + + M+ + D ++YT L++ LC++ + +A K+L M G PD
Sbjct: 321 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPD 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y ++ FC++G K+L++M +G +P++VS
Sbjct: 381 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 177/349 (50%), Gaps = 17/349 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ +P N+ +L+ + YF + + ++ +TP ++++ I++
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLV----DSGYFDQAHKVYMRMRDR--GITPDVYSFTIRM 153
Query: 140 --YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDLFKSAH 193
+ +++ P AL+ +M C ++N + V N+ ++LF
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGC-----EMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
GV ++N ++R C GD+ L +K+ +RGV+P++ +Y + +QGLC++ +++
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
AV ++ ++ +G PD ++Y L+ LC+ K +EA L +M +G PD YNT++
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+C+ G A +++ D NG +P+ +YR+L+ GLC +G + A + KG
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P+ + + LIKG N G + EA + E+ + G P T+ ++V +C
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 179/383 (46%), Gaps = 2/383 (0%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V +I Q DP+ A E+F+ ++ F+H+ STY +I KLG F ++++L+ +
Sbjct: 7 PKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 66
Query: 122 KSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + ++ +K Y A+ F M ++C+P N I+ +LV
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV-DSG 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y A ++ G+ P+ S+ I M++FC A L N M +G +V +Y
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ G ++ +L ML G ++ LL LC+K ++E KLL ++ +
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++ YN + G C+ G A +++ + G P++++Y L+ GLC F A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ Y+ M+++G P + LI G+C G V A ++ + + G P + T+ ++
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 421 ICAGEEMEKLGEVLNEIVKVEIK 443
+C E + + NE + IK
Sbjct: 366 LCHEGETNRALALFNEALGKGIK 388
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 1/319 (0%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L + S+ + + ++ + E N + F ML N++L +L
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ ++ L K GVLPN +YN+ ++ C G++ A + + E+G PDV
Sbjct: 228 KKGD-VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y L+ GLC+ S+ A L M+N+G PD+ +Y TL+ C+ ++ A +++
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
G PD Y +++ G C EG A + + G PN++ Y TL+ GL +QGM
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + M KG P + L+ G C +G V +A G+++ ++ G P T+ +
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 417 IVPQICAGEEMEKLGEVLN 435
++ +ME E+L+
Sbjct: 467 LIHGYSTQLKMENALEILD 485
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+LFTY I+ + D A++ ++E KP N ++ L + +
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K ++ G+ P++ +YN ++ +C G + +A + G +PD +YR L+ G
Sbjct: 307 VYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + + NRA+ L + L KG P+ + Y TL+ L + + EA +L M KG P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N +V G C+ G DA +++ M S G P++ ++ L+ G Q + A + +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+M+ G P ++L+ G C K ++ + +++ G AP+ T+ +++ +C
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 426 EMEKLGEVLNEI 437
++++ +L E+
Sbjct: 546 KLDEALGLLEEM 557
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P FTY LI +RAL F L KP N +++ L +++ + A
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL-SNQGMILEAA 411
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G++P +++NI++ C G +S A L M +G PD+ ++ IL+ G
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ A+++L+ ML+ G PD +Y +LLN LC+ K + + M KGC P++
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD-------- 358
+N ++ CR + +A +LE+M + P+ V++ TL+ G C G D
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 359 ----------------------------VAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+A+K Q M+ + P ++ GFC G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
V+ L E+++ G P T ++ +C + + + +++ +V+
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 131/334 (39%), Gaps = 39/334 (11%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA 185
P+ P T +IK + P +AL+ F SM E K ++E L + +
Sbjct: 4 PLLPKHVTAVIKCQKD---PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G Y M+ + G + A +F +M P V SY +M
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L ++A + M ++G PD S+T + S C+ + A +LL M +GC +
Sbjct: 121 LVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN 180
Query: 306 IVHYNTVVLGF-----------------------------------CREGRAIDACKVLE 330
+V Y TVV GF C++G + K+L+
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G LPNL +Y + GLC +G D A + + +I +G P + LI G C
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
K EA L +++ G P T+ ++ C G
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 48/267 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY L+ +++ + ++T+++M+E C P N +LE L +R L A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK-LDEA 550
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---------------- 229
L + V P+ ++ ++ FC NGD+ AYTLF KM E
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 230 --------------------RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
R + PD +YR+++ G C+ VN L +M+ GF+P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR-EGRAIDACK- 327
+ ++N LC + ++ EA ++ RM KG P+ V NT+ C + + + A K
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI----CDVDKKEVAAPKL 724
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
VLED+ C+ +Y L GL D+
Sbjct: 725 VLEDLLKKSCI-TYYAYELLFDGLRDK 750
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 2/271 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFN-CKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+T LI + D A FR M+ C+P N +++ L ++ L A +
Sbjct: 49 YTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL-CKQDRLDAARAVIAE 107
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A K P+ +YN +M A G + A F +M E G +P + S+ ++ GLCR +
Sbjct: 108 ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR 167
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A+++ +M+++ F P+ ++Y+ +++ LC+ +L EA +LL RM +GC PD+V Y
Sbjct: 168 LADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTP 227
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+VLGF GR A +L M S GC+P++V+Y ++ LC G D A + + +++
Sbjct: 228 LVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 287
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
SP+ ALI G+C +VDE V+ E+
Sbjct: 288 CSPNVVTYSALIGGYCRASRVDEGGKVMREM 318
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVD 257
P+ SY ++ C G + A+ LF KM G P+ +Y L+ GLC++ +++ A
Sbjct: 44 PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARA 103
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
++ + + F PD ++Y TL+ +L + ++ EA +M +G P +V +N ++ G C
Sbjct: 104 VIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLC 163
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R R DA +V +M PNLV+Y ++ GLC D A++ + M+S+G P
Sbjct: 164 RARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLV 223
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ GF G++D A G+L ++ G P T+ +++ ++C ++ E+ E+
Sbjct: 224 AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 283
Query: 438 V 438
V
Sbjct: 284 V 284
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 1/254 (0%)
Query: 185 AFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
AFDLF K G PN +YN ++ C + A + + +R PDV +Y LM
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
L + +V+ A+ M +G+VP +S+ ++ LCR ++L +A ++ M + +
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V Y+ V+ G C+ + +A ++L+ M S GC P+LV+Y LV G G D A
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ M+S+G P +I C VG+VD+A + EL+ +P+ T+ ++ C
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 304
Query: 424 GEEMEKLGEVLNEI 437
+++ G+V+ E+
Sbjct: 305 ASRVDEGGKVMREM 318
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 6/248 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY L+ + D AL TF M E P N I+ L R L A
Sbjct: 114 APDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR-LADAL 172
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F PN +Y++++ C + + A L ++M G PD+ +Y L+ G
Sbjct: 173 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 232
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ A+ LL M+++G +PD ++YT +++ LC+ ++ +A+++ + C+P++
Sbjct: 233 SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNV 292
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y+ ++ G+CR R + KV+ +M C PN+V+Y T++ GL + A +
Sbjct: 293 VTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFRE 349
Query: 367 MISKGFSP 374
M GF P
Sbjct: 350 MSECGFVP 357
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRM-K 298
I++QGLCR +V +A++ + L PD +SYTTL+N LC+ ++ A+ L +M
Sbjct: 15 IILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVA 74
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
GC P+ YN +V G C++ R A V+ + P++V+Y TL+ L G D
Sbjct: 75 AGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVD 134
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A M +G+ P +A+I G C ++ +A V E++ P+ T+ +++
Sbjct: 135 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 194
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+C +++++ ++L+ +V
Sbjct: 195 DGLCKSDQLDEAQQLLDRMV 214
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 37/187 (19%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKP-LPKQLNRILELLVTHRNYLRPAF 186
P+L TY + I +S+ D A + M+ C+P L +L R L A
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR--LDSAL 242
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G +P+ +Y +++ C G + A+ +F ++ P+V +Y L+ G
Sbjct: 243 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 302
Query: 247 CRKSQVNR--------------------------------AVDLLEDMLNKGFVPDTLSY 274
CR S+V+ A + +M GFVPD +Y
Sbjct: 303 CRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362
Query: 275 TTLLNSL 281
L +L
Sbjct: 363 RGLKRAL 369
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 25/387 (6%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS----LIDDILITLKS---------- 123
A E+F SR+ + + Y +I L AK ++ L+ D++ L++
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112
Query: 124 -------EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
E TP++F LI ++E L + AL + M + P + N +L+ LV
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ + ++ G PN +Y ++ C GD A+ LF++M E+ + P V
Sbjct: 170 -KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y IL++GLC +S+++ A + M N G +P+ +Y T+++ C+ +++A +L
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M G P++V + ++ G C+ + A K L DM S G +PN+ Y L+ G C G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + P LIKG C V +++EA G+L+E+ K G P+ T+
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ C MEK EV +++ + I+
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 3/292 (1%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY I D +A + F M+E P + IL + + + A
Sbjct: 190 SPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGESRISEAE 248
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F++ G+LPN +YN MM +C + A L+ +M G++P+V ++ IL+ GL
Sbjct: 249 SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGL 308
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A L DM + G VP+ Y L++ C+ L EA L ++ PD+
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y+ ++ G C R +A +L++M G LPN V+Y TL+ G C +G + A +
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M KG P+ LI G+C GK++ A G+ E++ G P + ++
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 9/316 (2%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
K F L D+++ + + +P T ++T LI+ + A FR+M P
Sbjct: 211 KAFRLFDEMI---EKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266
Query: 169 NRILE--LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +++ + H ++ A +L++ G+LPN ++ I++ C ++ A
Sbjct: 267 NTMMDGYCKIAH---VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M GV+P++ Y L+ G C+ ++ A+ L ++ +PD +Y+ L+ LC +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA LL MK KG P+ V YNT++ G+C+EG A +V M G PN++++ T
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C G + A M+ KG P ALI G G EA + +E+ +AG
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 407 EAPHEDTWVMIVPQIC 422
P+ T ++ +C
Sbjct: 504 LHPNVFTLSCLIDGLC 519
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 165/326 (50%), Gaps = 6/326 (1%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
Q D L A +FD + F + Y ILI L S + + T+++ + P+
Sbjct: 206 QGDFLKAFRLFDEMIEKKIF-PTVVIYTILIRGLCGESRISEAESMFRTMRNS--GMLPN 262
Query: 132 LFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
L+TY ++ Y + +AL+ ++ ML P +++ L + + A
Sbjct: 263 LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLC-KTDEMVSARKFL 321
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
GV+PN YN ++ +C G++S A +L +++ + ++PDV +Y IL++GLC
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ A LL++M KGF+P+ ++Y TL++ C++ + +A ++ +M KG P+I+ +
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
+T++ G+C+ G+ A + +M G LP++V+Y L+ G G A + + M
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEA 395
G P+ LI G C G++ +A
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDA 527
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 20/334 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ ILI L + LI + S + V P++F Y LI Y ++ AL +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMAS--FGVVPNIFVYNCLIDGYCKAGNLSEAL-SLH 356
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
S +E + + LP IL + + + A L + K G LPN +YN ++ +C
Sbjct: 357 SEIEKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++ A + ++M E+G+ P++ ++ L+ G C+ ++ A+ L +M+ KG +PD ++
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL---- 329
YT L++ + +EA++L M+ G +P++ + ++ G C++GR DA K+
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535
Query: 330 ---------EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
++ + C PN V Y L+ GLC G A K+ M G P
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+I+G + + + ++LK G P+ +
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 126/253 (49%), Gaps = 19/253 (7%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L KH +LP+ +Y+I+++ C + A L +M ++G +P+ +Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ + +A+++ M KG P+ ++++TL++ C+ K+ A L M +KG
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y ++ G ++G +A ++ ++M G PN+ + L+ GLC G A
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA- 527
Query: 362 KYMQLMISKG----------------FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
++L ++K SP+ + ALI+G C G++ +A ++ +
Sbjct: 528 --IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585
Query: 406 GEAPHEDTWVMIV 418
G P T ++I+
Sbjct: 586 GLRPDVFTCIVII 598
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 14/277 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI L D +L +K + + + LI Y + ++A++ M
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E +P + +++ + A L+ G+LP+ +Y ++ +G+
Sbjct: 430 TEKGIEPNIITFSTLIDG-YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL------------EDMLN 264
A+ L +M E G+ P+V + L+ GLC+ +++ A+ L + L+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 265 KGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ P+ + YT L+ LC ++ +A K M+ G PD+ ++ G R
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
D + D+ G +PN YR L G + G A
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 16/224 (7%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI Y ++ + A+ + M+ P +++ N + A
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN-TKEA 492
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF-------------NKMFERGV 232
F L K + G+ PN + + ++ C +G IS A LF N++
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P+ Y L+QGLC ++ +A DM G PD + ++ R LR+
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L + G P+ Y + G+ G A + ED+ G
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIG 656
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 161/313 (51%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + T+ LI + D A+ SM KP N +L+ L HR + + A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDK-A 246
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F++ + V P+ +S+NI++ FC G++ A + +M +RGV PDV S+ L+
Sbjct: 247 KEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ +++ A L +M G VPD + YT ++ CR + EA ++ M GC PD
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ G C++ R +DA ++L +M G P+L ++ TL+ G C G F+ A +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ + P ++LI G C G + +A + +++ P+ T+ +++ C
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486
Query: 426 EMEKLGEVLNEIV 438
++E+ L+E+V
Sbjct: 487 QVEEAFGFLDEMV 499
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 167/337 (49%), Gaps = 2/337 (0%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
L+L++ R + S + + L S P P +F LI+ Y +S P A + FR +L+
Sbjct: 59 LLLRMSRRRGASRREIVSSLLASSPTP-QPQVFDLLIRTYTQSRKPREAFEAFRLLLDHR 117
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P+P + L ++ + A + ++ N + NIM+ ++C + + A
Sbjct: 118 V-PVPASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKA 176
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
T+ ++M +R V PDV ++ +L+ R V+ A+ L++ M NKG P +++ ++L
Sbjct: 177 DTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKG 236
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC+ ++ +A ++ M PD+ +N ++ GFCR G +A K ++M G P+
Sbjct: 237 LCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPD 296
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+VS+ L+G +G D A Y++ M G P + +I GFC G + EA V +
Sbjct: 297 VVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRD 356
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
E++ G P T+ ++ +C + E+LNE+
Sbjct: 357 EMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 149/301 (49%), Gaps = 4/301 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFK 190
++T +I + + AL+ M+ C P N +L L HR L A +L
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR--LLDAEELLN 391
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ GV P+ ++ ++ +C +G+ A LF+ + + + PDV +Y L+ G+CRK
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKG 451
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ +A +L +DM + P+ ++Y+ L++S C K ++ EA+ L M KG P+I+ YN
Sbjct: 452 DLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYN 511
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ G+CR G + L+ M + LP+L+++ TL+ G + A +M +
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-MIVPQICAGEEMEK 429
P + +I GF G ++EA V +++ +G P T++ +I + AG E
Sbjct: 572 MVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEA 631
Query: 430 L 430
Sbjct: 632 F 632
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 128/258 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L S G+ P ++N +++ C + A +F M + V PDV S+ IL+
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR +V A+ ++M +G PD +S++ L+ + K+ A L MK G P
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y V+ GFCR G +A +V ++M GCLP++V+Y TL+ GLC Q A++ +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G +P LI G+C G ++A + + LL P + ++ +C
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450
Query: 425 EEMEKLGEVLNEIVKVEI 442
++ K E+ +++ EI
Sbjct: 451 GDLAKANELWDDMHAREI 468
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 169/377 (44%), Gaps = 20/377 (5%)
Query: 78 AKEIF---DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL-- 132
AKE+F D S P+ R N IL G + + + + + + VTP +
Sbjct: 246 AKEVFRAMDQCSVAPDVRSFN------ILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVS 299
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDL 188
F+ LI +++ D A R M P + ++ +V + A +
Sbjct: 300 FSCLIGLFSTRGKMDHAAAYLREMKGLGLVP-----DGVIYTMVIGGFCRAGSMSEALRV 354
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G LP+ +YN ++ C + A L N+M ERGV PD+ ++ L+ G CR
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+A+ L + +L++ PD ++Y +L++ +CRK L +A +L M + P+ V
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+ ++ C +G+ +A L++M S G LPN+++Y +++ G C G ++++Q M+
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
P + LI G+ + A V + K P T+ MI+ ME
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594
Query: 429 KLGEVLNEIVKVEIKGD 445
+ G V ++ I+ D
Sbjct: 595 EAGRVFKKMGASGIEPD 611
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 136/271 (50%), Gaps = 3/271 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K L+D + + + VTP L FT LI Y ++AL+ F ++L +P
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N +++ + + L A +L+ H + PN +Y+I++ + C G + A+
Sbjct: 436 DVVAYNSLIDGMC-RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++M +G +P++ +Y +++G CR V + L+ M+ +PD +++ TL++ +
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ + A+ + M+ + PD V YN ++ GF +G +A +V + M ++G P+ +
Sbjct: 555 EENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYT 614
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
Y +L+ G G A + M+ +GF+P
Sbjct: 615 YMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + + P+ +YN ++ C GD++ A L++ M R + P+ +Y IL+
Sbjct: 421 ALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C K QV A L++M++KG +P+ ++Y +++ CR +++ + L +M P
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ +NT++ G+ +E A V M P+ V+Y ++ G +QG + A +
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+ M + G P +LI G G EA + +E++ G AP +
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ + +++S C+ + +A ++ M+ + PD+V +N ++ R G A ++
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ M + G P +V++ +++ GLC FD AK+ + M +P + LI GFC V
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
G+V+EA +E+ + G P ++ ++ +M+ L E+ + + D I
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335
Query: 450 EAGIG 454
IG
Sbjct: 336 TMVIG 340
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Query: 289 EAYKLLCRMKVKGCNPDIVHY--NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
EAY+L V + ++ Y N +V +C+ A V+ +M P++V++
Sbjct: 143 EAYRL-----VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G D A + M +KG P ++++KG C + D+A V + +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
AP ++ +++ C E+E+ + E+ + + D IGL
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 197/390 (50%), Gaps = 14/390 (3%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P R+ +I Q + LA +IF YA + P F H+ TY ++ KL RA+ F ++ ++
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMAD 108
Query: 121 LKSEHYPVT--PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
L++ + P+ +LF L++ Y + + +++ F + +F K + LN +L +L+ +
Sbjct: 109 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 168
Query: 179 RNYLRPAFDLFKSAHKH-----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
+ FDL + K+ G+ PN + N++++A C DI AY + +++ G++
Sbjct: 169 QR-----FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLV 223
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P++ +Y ++ G + + A +LE+ML++G+ PD +YT L++ C+ + EA +
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ M+ P+ V Y ++ C+E ++ +A + ++M +P+ ++ LC+
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
D A + M+ P ++ LI C G+V EA + +E K G P T
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLT 402
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++ +C E+ + G + +++ + + K
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCK 432
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + K+ + PN +Y +M+RA C A +F++M ER MPD ++
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC +V+ A L ML +PD +TL++ LC++ ++ EA KL + KG P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIP 398
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ YNT++ G C +G +A ++ +DM C PN +Y L+ GL G + +
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G P+ + L +G +GK ++A ++ + G+ E +W + + +
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKE-SWELFLKKFAG- 516
Query: 425 EEMEK----LGEVLNEI 437
E++K L E+L+EI
Sbjct: 517 -ELDKGVLPLKELLHEI 532
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
S TLLN L + ++ + + K G P+I N +V C++ A KVL++
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+PS G +PNLV+Y T++GG +G + AK+ ++ M+ +G+ P + L+ G+C +G+
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
EA V++++ K P+E T+ +++ +C ++ + + +E+++ D+ +
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 144 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 203
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG +P+ +++TTL++ C+ ++ A ++ RM +
Sbjct: 204 LINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQS 263
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 264 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 323
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L P T+ MI+ +
Sbjct: 324 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEF 383
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 384 CKKGDVWKGSKLLKEM 399
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 60 VFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 118
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 119 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 178
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 179 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 238
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S LP+L++Y TL+ GLC +G A + M KG
Sbjct: 239 LIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 298
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ + + ++ +C
Sbjct: 299 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 358
Query: 432 EVLNEIVKVEIKGDT 446
++L E++ V++K DT
Sbjct: 359 KMLREMLSVDLKPDT 373
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 103 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 162
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 163 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 221
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 222 DEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKK 281
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 282 GDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 341
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S P +I FC G V + +L+E+ +
Sbjct: 342 TALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 401
Query: 405 AGEAP 409
G AP
Sbjct: 402 DGHAP 406
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 157 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 215
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 216 DANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLI 275
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 276 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 335
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S P+ +Y ++ C +G K
Sbjct: 336 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKL 395
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G +P + L+ G
Sbjct: 396 LKEMQRDGHAPSVVTYNVLMNG 417
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + L +R + M E C P + I++ + +L A ++
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG-ICKEGHLEVANEILNRM 312
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G+ PN YN +++ C A L ++MF++ D ++ IL+ C+ V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+R ++LLE ML+ G +PD ++YTT++N C++ + EA LL M GC P+ V Y V
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C GR +DA +++ M GC PN V++ TL+ LC +G+ + A + ++ M+ G
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP +I G GK +EA +L ++ G +P+ + I + + K+ +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 433 VLNEIVKVEIKGDTRIVEAGI 453
+ + I I+ D + A I
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVI 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ E D A+ R + F C+ N +L+ L + + +L +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW-GDVEELMDEMVRV 245
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
PN ++N ++ C NG + + +M E G PD+ Y ++ G+C++ + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L M + G P+ + Y T+L LC ++ +EA +LL M K C D V +N +V
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G ++LE M S+GC+P++++Y T++ G C +G+ D A ++ M S G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++KG C+ G+ +A ++ ++++ G P+ T+ ++ +C +E+ E+L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 436 EIV 438
+++
Sbjct: 486 QML 488
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +T+ +++ AL+ M C P+P + ILE + R
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF-RN 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ + ++ H G +T + N+++ A C G + A L K+ G D+ SY +++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + +L+++M+ P+ +++ TL+ LCR +++L +M GC P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------- 351
DI Y T++ G C+EG A ++L MPS G PN+V Y T++ GL
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 352 ----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
C G+ D + ++ M+S G P +I GFC
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E+++++++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y ++ L A+ + +++L + + P+ F
Sbjct: 304 VANEILN---RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ ML C P ++ + A L KS
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-KEGLIDEAVMLLKSMSS 419
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C G A L ++M ++G P+ ++ L+ LC+K V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC + D A + M+S G P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LIKG + G EA +L EL G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN M+ +C G ++ A L + V P+ ++ +++GLC + ++ A+++L++M
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG P Y +L + CR R + ++L M KGC D + N V+ C +G
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + GC ++VSY ++ GLC + ++ M M+ +P+ + L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I C G + VL ++ + G P + I+ IC +E E+LN +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 112 SLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L+D ++ L+ + P + TY +I + + L D A+ +SM CKP
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
+L+ L + ++ A +L + G PN ++N ++ C G + A L +M
Sbjct: 430 TIVLKGLCSAGRWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL----------- 277
G PD+ SY ++ GL + + A++LL M+NKG P+T+ Y+++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 278 ------------------------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
++SLC++ + A M GC P+ Y ++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 314 LGFCREGRAIDACKVLEDMPSNGCL 338
G EG A +A ++L ++ S G L
Sbjct: 609 KGLASEGLAKEAQELLSELCSRGAL 633
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y ++ G CR Q+ A L + P+ ++ ++ LC + ++ +A ++L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KGC P Y+ ++ CR G ++ +VLE M + GC + + ++ +C+QG
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A ++ + G +A++KG C + + +++E+++ AP+ T+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ +C E++ EVL ++ + D R+
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 176/391 (45%), Gaps = 15/391 (3%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
S S + S C V L + D +A+ + +P + S +
Sbjct: 536 SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTES-------------FVQ 582
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D ++ T K + P +F ++ E + A K F ML + N L
Sbjct: 583 FFDLLVYTYKD--WGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYL 640
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L N A +F+ + GV N SYNI++ C G I+ A+ L M +G
Sbjct: 641 ARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGY 700
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV SY ++ G CR ++++ L+E M KG P++ +Y +++ LCR KL EA +
Sbjct: 701 TPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEE 760
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
M +G PD + Y T+V GFC+ G A K +M S P++++Y ++ G C
Sbjct: 761 AFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 820
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A K M+ +G P L+ G+C G + +A V +++AG +P+
Sbjct: 821 QIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV 880
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C +++ E+L+E+ K+ ++
Sbjct: 881 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 132/257 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L + L + + G+ PN+ +Y ++ C ++ A F++M +G++PD Y
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ + A +M ++ PD L+YT +++ C+ + EA KL M +G
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDI+ + ++ G+C+ G DA +V M GC PN+V+Y TL+ GLC +G D A
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M G P+ ++++ G C G ++EA ++ E AG T+ ++
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959
Query: 422 CAGEEMEKLGEVLNEIV 438
C EM+K E+L E++
Sbjct: 960 CKSGEMDKAQEILTEML 976
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + +Y +I Y D+ K M + KP I+ LL L A
Sbjct: 701 TPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLC-RICKLAEAE 759
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ F G+LP+T Y ++ FC GDI A F +M R + PDV +Y ++ G
Sbjct: 760 EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ + A L +ML +G PD +++T L+N C+ +++A+++ M GC+P++
Sbjct: 820 CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y T++ G C+EG A ++L +M G PN+ +Y ++V GLC G + A K +
Sbjct: 880 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G + L+ +C G++D+A +L E+L G P T+ +++ C
Sbjct: 940 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999
Query: 427 MEKLGEVLNEIV 438
+E ++LN ++
Sbjct: 1000 LEDGEKLLNWML 1011
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R +R A F H + P+ +Y ++ FC GD+ A LF++M RG+ PD+ +
Sbjct: 787 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ LM G C+ + A + M+ G P+ ++YTTL++ LC++ L A +LL M
Sbjct: 847 FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+I YN++V G C+ G +A K++ + + G + V+Y TL+ C G D
Sbjct: 907 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ + M+ KG P + L+ GFC G +++ +L +L G AP+ T+ +V
Sbjct: 967 KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
Q C ++ + ++ ++ D + E
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYE 1058
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 7/327 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYLR 183
+TP + TY I + D A K F ML C+ L + EL+ + +++
Sbjct: 805 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEML---CRGLEPDIITFTELMNGYCKAGHIK 861
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
AF + + G PN +Y ++ C GD+ A L ++M++ G+ P++ +Y ++
Sbjct: 862 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 921
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ + AV L+ + G DT++YTTL+++ C+ ++ +A ++L M KG
Sbjct: 922 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQ 981
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P IV +N ++ GFC G D K+L M + G PN ++ LV C + A
Sbjct: 982 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAI 1041
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M S+G P L+KG CN + EA + +E+ G + T+ +++
Sbjct: 1042 YKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFK 1101
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVE 450
++ + E+ +++ + + D I +
Sbjct: 1102 RKKFVEAREIFDQMRRDGLAADKEIFD 1128
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ Y ++ A + M++ C P +++ L + L A +L
Sbjct: 847 FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEM 905
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G+ PN +YN ++ C +G+I A L + G+ D +Y LM C+ ++
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 965
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A ++L +ML KG P +++ L+N C L + KLL M KG P+ +N +
Sbjct: 966 DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V +C A + +DM S G P+ +Y LV G C+ A Q M KGF
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
S S LIKGF K EA + +++ + G A ++ + G+ + + +
Sbjct: 1086 SVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVD 1145
Query: 433 VLNEIVK 439
++EI++
Sbjct: 1146 PIDEIIE 1152
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 143/255 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 140 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 199
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 200 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQS 259
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y L+ G C +G D A
Sbjct: 260 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAF 319
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 320 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 379
Query: 422 CAGEEMEKLGEVLNE 436
C ++ K ++L E
Sbjct: 380 CKKGDVWKGSKLLKE 394
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 162/337 (48%), Gaps = 6/337 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F++I + T +S+ Y +F+ LI Y ES A++ +R E +
Sbjct: 40 FAVILETKGTQRSDIY-----VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRK 94
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+LE L+ + Y + + +K + G + +NI+M FC DI +A ++F+ + +
Sbjct: 95 VLEHLMKLK-YFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKW 153
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V SY LM G R ++ L M G PD +Y+ L+N LC++ K+ +A
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M VKG P+ V + T++ G C+ GR A ++ + M S LP+L++Y TL+ G
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYG 273
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G A + M KG P ALI G C G +D A + +++
Sbjct: 274 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLD 333
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+ + ++ +C ++L E++ V +K D R
Sbjct: 334 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 370
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P FTY +I + + D AL+ F M + C+P + ++ L + A
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD-SGRVNEA 304
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL + HG+LP + + A C G A+ LF M +G P+V +Y L+ G
Sbjct: 305 FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 364
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + A+ L M G P+T++Y L+N L ++++ A+ +L M GC+P+
Sbjct: 365 LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G+C G A V+ +M G NLV+Y T++ G CD G A + +
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 484
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
LM G P LI GFC + K++ A G+ E++ G P+E T+ ++ C E
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544
Query: 426 EMEKLGEVLNEI 437
+++ +L +
Sbjct: 545 KLDTATSLLEHM 556
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY LI S L A+ F M P N ++ +LV +R ++ AF
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR-IKYAFV 411
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG---------------- 231
+ ++G PN +YN M++ +C GD A + N M +RG
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471
Query: 232 -------------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
PD SY L+ G C+ S++ A L +M++ G P+ +
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT L++ C+ +KL A LL MK GC P++ YN ++ G ++ A ++ + M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN+V+Y ++ GLC G +A + MI +G P+ +LI+ GKV
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+EA + EL + G P E T+V ++ ++E L ++K
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 7/354 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESN 144
Q R Y L++ L R + + D + SE V P+L Y I A + N
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE--GVQPNLLIYNAVINALCKDGN 230
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ D A + + E P ++ L ++ L A +F K G PNT +Y
Sbjct: 231 VAD-AETIMKKVFESEMSPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ ++ C +G ++ A+ L +M G++P + + LC A L DM N
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P+ +YT L++ LC L+ A L RM G P+ V YN ++ R
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A VL M NGC PN+V+Y ++ G C G A M M+ +G S + + +IK
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G+C+ G A +L+ + G P E ++ ++ C +ME + NE+V
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 127/254 (50%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D + GV PN YN ++ A C +G+++ A T+ K+FE + PD +Y ++ G
Sbjct: 200 MDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILG 259
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CRK ++ A+ + M +G P+T++Y+TL+N LC ++ EA+ L+ M + G P
Sbjct: 260 HCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPT 319
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ C G DA ++ DM + GC PN+ +Y L+ GLC G+ VA
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P+ +ALI ++ A VL + + G +P+ T+ ++ C
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439
Query: 426 EMEKLGEVLNEIVK 439
+ +K V+N +++
Sbjct: 440 DPKKAMLVMNNMLQ 453
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 58/411 (14%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKL---GRA-KYFSLIDDILITLKSEHYPVTP 130
A ++F+ +++ PN TY LI L GR + F LI ++++ + + P
Sbjct: 269 ALQVFNQMAKEGCEPN----TVTYSTLINGLCDSGRVNEAFDLIREMIL------HGILP 318
Query: 131 SLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+ T I A ++ + A + F M C+P ++ L L+ A L
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV-SGLLKVAIGL 377
Query: 189 FKSAHKHGVLPNTKSYNI-----------------------------------MMRAFCF 213
F + GV PNT +YN M++ +C
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GD A + N M +RG ++ +Y +++G C A+ +L+ M + G PD S
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT L+ C+ K+ A+ L M G P+ V Y ++ G+C++ + A +LE M
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+GC PN+ +Y L+ GL Q F A++ ++MI +G P+ A+I G C G
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
A + ++++ G P+ T+ ++ + G+E K+ E N ++E G
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRAL--GQE-GKVEEAENLFAELERHG 665
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ +L TY +IK Y +S AL+ M + CKP ++ + + AF
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI-CGFCKISKMESAF 515
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF G+ PN +Y ++ +C + + A +L M G P+V++Y +L+ GL
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ + A +L + M+ +G P+ ++YT +++ LC+ A ++ +M +GC P++
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y++++ +EG+ +A + ++ +G +P+ ++Y ++ G + A ++
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 367 MISKGFSPHFSVSHALIKGFCN 388
MI G P LIKG N
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKN 717
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 33/318 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y + D A M C+P + N ++ L T +N A +L K
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVM 591
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN +Y M+ C NG S+A +FNKM E+G +P++ +Y L++ L ++ +V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L ++ G +PD ++Y ++ + K+ A+ L RM GC P + Y +
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNL-VSYRT------------------------- 346
+ G E D + L +P +PN Y+T
Sbjct: 712 IKGLKNEYLLAD--QRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 347 --LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LV L G + A + + MIS+G P ++L+ V VD A GV + +
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 405 AGEAPHEDTWVMIVPQIC 422
G H + + ++ +C
Sbjct: 828 QGCEVHLNGYKELICALC 845
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + + + G+ + +Y L+ L R +D ML++G P+ L Y ++N+L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + +A ++ ++ +PD Y +++LG CR+ A +V M GC PN
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y TL+ GLCD G + A ++ MI G P I C++G ++A + +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ G P+ T+ ++ +C
Sbjct: 346 MKNKGCEPNVYTYTALISGLC 366
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 139/333 (41%), Gaps = 29/333 (8%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESN 144
++ R + TY +LI L + FS +++ + E + P++ TY +I ++
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE--GIFPNVVTYTAMIDGLCKNG 614
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
AL+ F M+E C P + ++ L + A +LF +HG++P+ +Y
Sbjct: 615 STSLALEMFNKMIEQGCLPNLLTYSSLIRAL-GQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV--NRAVDLLEDM 262
M+ A+ +G + A+ +M + G P + +Y +L++GL + + R L + +
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733
Query: 263 LNKGFVPDTLSY----------------------TTLLNSLCRKKKLREAYKLLCRMKVK 300
N F T L+++L + EA +LL M +
Sbjct: 734 PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD YN+++ R A V + M + GC +L Y+ L+ LC A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ + M+ + ++P V LI G G D
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ S K+ + L + G + Y+ +++ R G M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PNL+ Y ++ LC G A+ M+ + SP ++I G C +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V ++ K G P+ T+ ++ +C + + +++ E++
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L M +G+ PD E+Y L+ L R V+ A+ + + M +G Y L+
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+LC+ + +EA M ++ NPD V ++ G R+G + L M + +P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
Query: 340 NLVSYRTLV 348
+ Y L
Sbjct: 903 SFHIYTILA 911
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 188/396 (47%), Gaps = 19/396 (4%)
Query: 61 SPCRVQKLI-ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P R++ L+ A Q+D + + ++ + + H+ T+ IL+ L + + F L
Sbjct: 68 TPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTLSKHRQFKTTQKFLT 127
Query: 120 TLKSEHYPVT----------------PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
S H P T P +F L K A +N A + M E P
Sbjct: 128 QTLSSHPPHTLFDALLFSYRLCNSSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSP 187
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYT 222
+ N L L+ R A ++ + V PN + N+++RA+C G++ +
Sbjct: 188 TVQSCNAFLSSLLRLRRA-DIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFD 246
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ KM + G+ P+V S+ L+ G C K A+ + M+ G P+ +++ TL+N C
Sbjct: 247 MLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFC 306
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+++KL EA ++ MKV +P +V YNT++ G+ + G + +V E+M NG +++
Sbjct: 307 KERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADIL 366
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y L+ GLC G A +++ + + P+ S ALI G C + A + +
Sbjct: 367 TYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSM 426
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+++G +P+ T+ M++ C E+ + +VL +++
Sbjct: 427 VRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDML 462
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V PS+ TY L+ Y + + ++ + M+ K N ++ L + + A
Sbjct: 326 VDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALI-LGLCKDGKTKKA 384
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ K ++PN +++ ++ C + A+ ++ M G P+ +++++L+
Sbjct: 385 AGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISA 444
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + AV +L DML + PD + + L + LCR K + A L M+V+ PD
Sbjct: 445 FCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
Query: 306 IVHYNTVVLGFCREGRAI 323
GF +E AI
Sbjct: 505 ---------GFDKEKIAI 513
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 73/153 (47%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+++ ++G+ + +YN ++ C +G A ++ + ++P+ ++ L+ G C
Sbjct: 352 VYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQC 411
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ RA + M+ G P+ ++ L+++ C+ + A ++L M + +PD+
Sbjct: 412 VRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLS 471
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
+ + G CR G+ A + +M LP+
Sbjct: 472 TMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
>gi|224064366|ref|XP_002301440.1| predicted protein [Populus trichocarpa]
gi|222843166|gb|EEE80713.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 190/436 (43%), Gaps = 78/436 (17%)
Query: 61 SPCRVQKLIASQSDPLLAKEIF-DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P ++ +++ SQ +PL A +IF D + P++ H+ Y +I LG + + + +++
Sbjct: 10 TPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDRIAEMKEVID 69
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV--- 176
++ + S+F IK YA + A+ F+++ +FNC + N +L++LV
Sbjct: 70 QMRDDSCECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNTLLQILVKES 129
Query: 177 ----THRNYLRP----------------------------AFDLFKSAHKHGVLPNTKSY 204
HR +L A +F+ G PN SY
Sbjct: 130 KLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQGCYPNRDSY 189
Query: 205 NIMMRAFCFNGDISIA----YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
I+MR C +G ++ A Y++F ++ ++G D+ YR L+ LC QV A+++L
Sbjct: 190 RILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQVEEAMEILG 249
Query: 261 DMLNKGF------------------------------------VPDTLSYTTLLNSLCRK 284
+L KG VP SYT + L +
Sbjct: 250 KILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYTAMAVDLYCE 309
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE-DMPSNGCLPNLVS 343
K +A K+L + +G P + Y V CR+GR+ +A V+E +M +PN+
Sbjct: 310 GKTGQADKVLDETQERGYRPSLRTYEAKVTALCRQGRSGEAINVIEREMVERNSVPNVRL 369
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y L+ GLCD G +A Y++ M + G + L+ G C G+ EA VLEE+
Sbjct: 370 YNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQETYGILVDGLCRDGRFVEASKVLEEM 429
Query: 403 LKAGEAPHEDTWVMIV 418
L P DT+ +++
Sbjct: 430 LIKSYWPPADTYNILI 445
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 136/329 (41%), Gaps = 43/329 (13%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA----FDLFKS 191
L+ + + N D AL+ F+ M C P + RIL + L A + +F
Sbjct: 157 LLDVLCQRNRSDLALQIFQEMDYQGCYP-NRDSYRILMRGLCEDGRLNEATHLLYSMFWR 215
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNG------------------------------------ 215
+ G + Y ++ A C NG
Sbjct: 216 ISQKGSGEDIVVYRTLLDALCDNGQVEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCE 275
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
DI L N+ RG +P + SY + L + + +A +L++ +G+ P +Y
Sbjct: 276 DIEATKLLINEALIRGGVPSLASYTAMAVDLYCEGKTGQADKVLDETQERGYRPSLRTYE 335
Query: 276 TLLNSLCRKKKLREAYKLLCR-MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+ +LCR+ + EA ++ R M + P++ YN ++ G C G + A L+ M
Sbjct: 336 AKVTALCRQGRSGEAINVIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAK 395
Query: 335 N-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC+ N +Y LV GLC G F A K ++ M+ K + P + LI+G ++G+
Sbjct: 396 QVGCVANQETYGILVDGLCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGLSSMGRQY 455
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
EA LEE++ + P W +V +C
Sbjct: 456 EAVIWLEEMVSQDKLPELYVWRSLVTSVC 484
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAV 256
+PN + YN++++ C G+ +IA + +M ++ G + + E+Y IL+ GLCR + A
Sbjct: 364 VPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQETYGILVDGLCRDGRFVEAS 423
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+LE+ML K + P +Y L+ L + EA L M + P++ + ++V
Sbjct: 424 KVLEEMLIKSYWPPADTYNILIRGLSSMGRQYEAVIWLEEMVSQDKLPELYVWRSLVTSV 483
Query: 317 CREGRAID-ACKVLEDMPSN 335
C A+D +C+ + S+
Sbjct: 484 CCNMVAVDVSCETFNQLISS 503
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTF-RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PSL TY K+ A A+ R M+E N P + N +L+ L N
Sbjct: 329 PSLRTYEAKVTALCRQGRSGEAINVIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVS 388
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + A + G + N ++Y I++ C +G A + +M + P ++Y IL++GL
Sbjct: 389 YLKRMAKQVGCVANQETYGILVDGLCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGL 448
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ AV LE+M+++ +P+ + +L+ S+C
Sbjct: 449 SSMGRQYEAVIWLEEMVSQDKLPELYVWRSLVTSVC 484
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 38/364 (10%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
++ +L RA+ F ++ ++ L+S P+ ++F LI + PD AL FR++ F
Sbjct: 61 VLYRLARARLFPILLPLISELRSRRAPLRGTVFAALIDRLGAAARPDAALLVFRAVPAF- 119
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C + +L V + L A DL A K GV PN SYNI+++ C A
Sbjct: 120 CSHSNATFHALLHCFVCN-GRLDAARDLLPRAAKLGVRPNAVSYNIILKGACERDGFVGA 178
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ ++M RGV P V ++ L+ C++ ++ A L E+M+ +G P+ ++Y+ L+
Sbjct: 179 RVVLDEMLGRGVRPTVVTFNTLVGAACQEGELGGAERLREEMVRRGVTPNAVTYSLLMRG 238
Query: 281 LCRKKKLREAYKLLCRMKVKGCN-----------------------------------PD 305
LC + +A K++ M+ +GC PD
Sbjct: 239 LCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRKLKPD 298
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
YN ++ C GR ++A K L +M G +P+ +YR L G C F + + +
Sbjct: 299 DASYNVLIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLGLRVL 358
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++ G P L+KG K +EAC VLE++ ++G + W +V +C+G
Sbjct: 359 NAMLASGHCPLAHTFRHLVKGLSEDEKTEEACFVLEKMAESGAWMDAEGWQSLVTCVCSG 418
Query: 425 EEME 428
E++
Sbjct: 419 SEVK 422
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 149/300 (49%), Gaps = 3/300 (1%)
Query: 144 NLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
NL D ALK F M E C P + ++ L L AF L + G P+T+
Sbjct: 245 NLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGL-CEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y ++++A C G I A+ LF++M RG P+V +Y +L+ GLCR ++ A + M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ P ++Y L+N C+ ++ A++LL M+ + C P++ +N ++ G CR G+
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +L+ M NG P++VSY L+ GLC +G + A K + M P A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I FC GK D A L +L+ G + E T ++ +C + +L +VK+ I
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 192/446 (43%), Gaps = 81/446 (18%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGR-AKYFSLIDDILITLKSEHYPVTPSLF 133
A ++FD S++ ++ +Y ILI ++GR + F L D + PS
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM------GEKGCQPSTR 302
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKP-------LPKQL---------------- 168
TY LIK + L D+A F M+ CKP L L
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 169 --NRILELLVTHRNYLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+RI ++T+ + PAF+L K PN +++N +M C G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A L +M + G+ PD+ SY +L+ GLCR+ +N A LL M PD L++T +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE------- 330
+N+ C++ K A L M KG + D V T++ G C+ G+ DA +LE
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 331 -----------DMPSNGC-----------------LPNLVSYRTLVGGLCDQGMFDVAKK 362
DM S GC +P++V+Y TLV GL G + +
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++LM G P+ +I G C G+V+EA +L + +G +P+ T+ ++V
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRI 448
++++ E + +V+ + + RI
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRI 688
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 179 RNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDV 236
+N A ++F S K G + ++ ++ FC ++ A +F+ M E P+
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
SY IL+ GLC ++ A L + M KG P T +YT L+ +LC + + +A+ L
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M +GC P++ Y ++ G CR+G+ +A V M + P++++Y L+ G C G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + + +M + P+ + L++G C VGK +A +L+ +L G +P ++ +
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ +C M ++L+ + +I+ D
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L++ P +A+ + ML+ P N +++ L ++ A+ L S
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL-CREGHMNTAYKLLSSM 467
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ + P+ ++ ++ AFC G +A M +G+ D + L+ G+C+ +
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 253 NRAVDLLE------------------DMLNKG-----------------FVPDTLSYTTL 277
A+ +LE DML+KG VP ++YTTL
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ L R + ++++L MK+ GC P++ Y ++ G C+ GR +A K+L M +G
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
PN V+Y +V G + G D A + ++ M+ +G+ + + +L++GF
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+AY + +M G + + YR ++ LC+ A + +L GFV D+ T+LL
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 279 NSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
CR LR+A K+ M K C P+ V Y+ ++ G C GR +A + + M GC
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y L+ LCD+G+ D A MI +G P+ LI G C GK++EA G
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
V +++K P T+ ++ C + E+L + K K + R
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 143/308 (46%), Gaps = 20/308 (6%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL ++++ P LN IL++L + ++ + +K G++P+ +Y ++
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDML-SKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+GDI+ ++ + M G +P+V Y I++ GLC+ +V A LL M + G
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK- 327
P+ ++YT ++ KL A + + M +G + Y++++ GF + ID +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 328 -VLEDMP----SNGCLPNLVSYRTLVGG------------LCDQGMFDVAKKYMQLMISK 370
+ D+ C+ L+S +GG LC +G D + +Q ++ +
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G ++ +++ +C+ K + ++ +LK+G P ++ +++ + + E+
Sbjct: 769 GVFLEKAMD-IIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Query: 431 GEVLNEIV 438
E++ E++
Sbjct: 828 RELVMELL 835
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 2/271 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFN-CKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+T LI + D A FR M+ C+P N +++ L ++ L A +
Sbjct: 99 YTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC-KQDRLDAARAVITE 157
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A K P+ +YN +M A G + A F +M E G +P + S+ ++ GLCR +
Sbjct: 158 ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR 217
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A+++ +M+++ F P+ ++Y+ +++ LC+ +L EA +LL RM +GC PD+V Y
Sbjct: 218 LADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTP 277
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+VLGF GR A +L M S GC+P++V+Y ++ LC G D A + + +++
Sbjct: 278 LVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 337
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
SP+ ALI G+C +VDE V+ E+
Sbjct: 338 CSPNVVTYSALIGGYCRASRVDEGGKVMREM 368
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 9/319 (2%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P + + LI+ + ++ D A R M + + + IL+ L +
Sbjct: 20 QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLC-RCGRVAQ 78
Query: 185 AFDLFKS----AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESY 239
A + F + AH P+ SY ++ C G + A+ LF KM G P+ +Y
Sbjct: 79 ALEHFDASLELAHAQ---PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTY 135
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC++ +++ A ++ + + F PD ++Y TL+ +L + ++ EA +M
Sbjct: 136 NALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 195
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P +V +N ++ G CR R DA +V +M PNLV+Y ++ GLC D
Sbjct: 196 EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDE 255
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A++ + M+S+G P L+ GF G++D A G+L ++ G P T+ +++
Sbjct: 256 AQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVID 315
Query: 420 QICAGEEMEKLGEVLNEIV 438
++C ++ E+ E+V
Sbjct: 316 KLCKVGRVDDAHEIFRELV 334
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 1/254 (0%)
Query: 185 AFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
AFDLF K G PN +YN ++ C + A + + +R PDV +Y LM
Sbjct: 115 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLM 174
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
L + +V+ A+ M +G+VP +S+ ++ LCR ++L +A ++ M + +
Sbjct: 175 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 234
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V Y+ V+ G C+ + +A ++L+ M S GC P+LV+Y LV G G D A
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 294
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ M+S+G P +I C VG+VD+A + EL+ +P+ T+ ++ C
Sbjct: 295 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 354
Query: 424 GEEMEKLGEVLNEI 437
+++ G+V+ E+
Sbjct: 355 ASRVDEGGKVMREM 368
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 6/248 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY L+ + D AL TF M E P N I+ L R L A
Sbjct: 164 APDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR-LADAL 222
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F PN +Y++++ C + + A L ++M G PD+ +Y L+ G
Sbjct: 223 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 282
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ A+ LL M+++G +PD ++YT +++ LC+ ++ +A+++ + C+P++
Sbjct: 283 SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNV 342
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y+ ++ G+CR R + KV+ +M C PN+V+Y T++ GL + A +
Sbjct: 343 VTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFRE 399
Query: 367 MISKGFSP 374
M GF P
Sbjct: 400 MSECGFVP 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 37/187 (19%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKP-LPKQLNRILELLVTHRNYLRPAF 186
P+L TY + I +S+ D A + M+ C+P L +L R L A
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR--LDSAL 292
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G +P+ +Y +++ C G + A+ +F ++ P+V +Y L+ G
Sbjct: 293 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 352
Query: 247 CRKSQVNR--------------------------------AVDLLEDMLNKGFVPDTLSY 274
CR S+V+ A + +M GFVPD +Y
Sbjct: 353 CRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412
Query: 275 TTLLNSL 281
L +L
Sbjct: 413 RGLKRAL 419
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 152/273 (55%), Gaps = 6/273 (2%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
I++ L N++ A +LF H+ G+ PN +YN M+ +FC +G S A L M E+
Sbjct: 61 IVDRLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 119
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
+ PD+ ++ L+ ++ +V+ A ++ ++ML P T++Y ++++ C++ ++ +A
Sbjct: 120 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 179
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++L M KGC+PD+V ++T++ G+C+ R + ++ +M G + N V+Y TL+ G
Sbjct: 180 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 239
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C G D A+ + MIS G +P + H ++ G C+ ++ +A +LE+L K+ P
Sbjct: 240 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPR 299
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ + +C+ + GEV IV+V+ K
Sbjct: 300 ---LIFFLFSLCSF--ILGFGEVCYRIVQVKFK 327
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 45/292 (15%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP----------DVESYRILMQG 245
G PN ++N +M + C G + A L ++M E G P DV ++
Sbjct: 5 GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ A +L +M KG P+ L+Y +++S C + +A +LL M K NPD
Sbjct: 65 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124
Query: 306 IVH-----------------------------------YNTVVLGFCREGRAIDACKVLE 330
IV YN+++ GFC++ R DA ++L+
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M S GC P++V++ TL+ G C D + M +G + LI GFC VG
Sbjct: 185 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 244
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+D A +L E++ G AP T+ ++ +C+ +E+ K +L ++ K E+
Sbjct: 245 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEV 296
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP----------DTLSYTT 276
M E G P+V ++ LM LCR+ +V A+ L++ M+ +G P D + T
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ LC+ A L M KG P+++ YN ++ FC GR DA ++L M
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P++V++ L+ + A++ + M+ P +++I GFC +VD+A
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+L+ + G +P T+ ++ C + ++ E+ E+ + I +T
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 230
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 168/327 (51%), Gaps = 4/327 (1%)
Query: 114 IDDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
+++IL LK E + +F +I Y ++LPDRA + F + F CK K +N +L
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLL 60
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L+ +R L +F +G P+ ++NI++ A C GD+ + +F++M +RGV
Sbjct: 61 AALLKNRQ-LEKMTQVFVDISNYGS-PDACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 118
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAY 291
P+V ++ L+ GL S++ A+ L EDM+ + P+ YTTL+ C +L A+
Sbjct: 119 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAF 178
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
KL M Y+T++ + GR + +L +M NGC P+ V+Y ++ G
Sbjct: 179 KLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGH 238
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + + A + M M+ KG P + +I C GK+D+A +LE++ + G P
Sbjct: 239 CKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDV 298
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIV 438
++ +I +C ++++ +L+E++
Sbjct: 299 LSYRIIFDGLCEMMQLKEATSILDEMI 325
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 2/236 (0%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ +F ++ V+S L+ L + Q+ + + D+ N G PD ++ L++
Sbjct: 37 AFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYG-SPDACTFNILIH 95
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL- 338
+ C L + + M+ +G P++V + T++ G + +A ++ EDM +
Sbjct: 96 AACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIK 155
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN Y TL+ G C G + A K + M++ +V LI G+ +E +
Sbjct: 156 PNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDI 215
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
L E+ + G P T+ I+ C ++E V++E+V+ K D IG
Sbjct: 216 LREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIG 271
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 186/368 (50%), Gaps = 14/368 (3%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
PL A +F A HS +Y ++ L + SL +L +++ + T + +
Sbjct: 118 PLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYN 177
Query: 135 YLIKIY-AESNLP-DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
L+K + +++ +P D A++ FR++ KP N +++ L R L A DLF
Sbjct: 178 VLVKAHCSDAAVPIDDAVRVFRNIP----KPDACSYNTVIDGLC-RRGRLPEARDLFAEM 232
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G P +Y ++ A LF++M RG+MP+V +Y L+ GLC+ +
Sbjct: 233 IANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRA 292
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
AV+LL+ M+ + +P+T++Y+++++ LC++ L +A ++L RM+++G PD + +
Sbjct: 293 ASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKL 352
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR-------TLVGGLCDQGMFDVAKKYMQ 365
++G C GRA++A L++M G PN +++ +V LC +G A + Q
Sbjct: 353 IVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQ 412
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M ++G S + H L++ +++A V+ ++L P +TW IV + +
Sbjct: 413 SMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVRAYWSKK 472
Query: 426 EMEKLGEV 433
++ +G V
Sbjct: 473 KLRAVGSV 480
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 189/398 (47%), Gaps = 28/398 (7%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRH--SNSTYLILILKLGRAKYFSLIDD------ 116
+ +L+ ++ DP A +FD A+ +P+ +ST L SL+
Sbjct: 20 LHRLVRAERDPRRALALFDAATARPSSASPPDDSTAAAAAPVLPSRDTVSLLTSRLASAS 79
Query: 117 ------ILITLKSEHYPVTPSL---FTYLIKIYAESNLPDRALKTFRSMLEFNCKP-LPK 166
L++ E +P L F L++ Y+ ++ P AL FRS P +
Sbjct: 80 LLPLASSLLSRSRELFPSPGELEPPFLSLLRAYSRAHQPLAALHLFRSAPSALGLPHSAR 139
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+L LV H ++L A L G P T +YN++++A C + + I + +
Sbjct: 140 SYTAVLAALVAH-SHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAV--R 196
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+F PD SY ++ GLCR+ ++ A DL +M+ G P ++YTTL++ L R+
Sbjct: 197 VFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREAC 256
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+A KL M +G P++V Y++++ G C+ GRA A ++L+ M LPN ++Y +
Sbjct: 257 FDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSS 316
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC +G A + + M +G P + LI G C+ G+ EA L+E+ AG
Sbjct: 317 VIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAG 376
Query: 407 EAPHEDTWVM-------IVPQICAGEEMEKLGEVLNEI 437
P+ TW + +V +C+ E+ + +V +
Sbjct: 377 IRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSM 414
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P FTY +I + + D AL+ F M + C+P + ++ L + A
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD-SGRVNEA 304
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL + HG+LP + + A C G A+ LF M +G P+V +Y L+ G
Sbjct: 305 FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 364
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + A+ L M G P+T++Y L+N L ++++ A+ +L M GC+P+
Sbjct: 365 LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G+C G A V+ +M G NLV+Y T++ G CD G A + +
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 484
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
LM G P LI GFC + K++ A G+ E++ G P+E T+ ++ C E
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544
Query: 426 EMEKLGEVLNEI 437
+++ +L +
Sbjct: 545 KLDTATSLLEHM 556
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY LI S L A+ F M P N ++ +LV +R ++ AF
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR-IKYAFV 411
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG---------------- 231
+ ++G PN +YN M++ +C GD A + N M +RG
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471
Query: 232 -------------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
PD SY L+ G C+ S++ A L +M++ G P+ +
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT L++ C+ +KL A LL MK GC P++ YN ++ G ++ A ++ + M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN+V+Y ++ GLC G +A + MI +G P+ +LI+ GKV
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+EA + EL + G P E T+V ++ ++E L ++K
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 7/354 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESN 144
Q R Y L++ L R + + D + SE V P+L Y I A + N
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE--GVQPNLLIYNAVINALCKDGN 230
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ D A + + E P ++ L ++ L A +F K G PNT +Y
Sbjct: 231 VAD-AETIMKKVFESEMSPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ ++ C +G ++ A+ L +M G++P + + LC A L DM N
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P+ +YT L++ LC L+ A L RM G P+ V YN ++ R
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A VL M NGC PN+V+Y ++ G C G A M M+ +G S + + +IK
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G+C+ G A +L+ + G P E ++ ++ C +ME + NE+V
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 127/254 (50%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D + GV PN YN ++ A C +G+++ A T+ K+FE + PD +Y ++ G
Sbjct: 200 MDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILG 259
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CRK ++ A+ + M +G P+T++Y+TL+N LC ++ EA+ L+ M + G P
Sbjct: 260 HCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPT 319
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ C G DA ++ DM + GC PN+ +Y L+ GLC G+ VA
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P+ +ALI ++ A VL + + G +P+ T+ ++ C
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439
Query: 426 EMEKLGEVLNEIVK 439
+ +K V+N +++
Sbjct: 440 DPKKAMLVMNNMLQ 453
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 58/411 (14%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKL---GRA-KYFSLIDDILITLKSEHYPVTP 130
A ++F+ +++ PN TY LI L GR + F LI ++++ + + P
Sbjct: 269 ALQVFNQMAKEGCEPN----TVTYSTLINGLCDSGRVNEAFDLIREMIL------HGILP 318
Query: 131 SLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+ T I A ++ + A + F M C+P ++ L L+ A L
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV-SGLLKVAIGL 377
Query: 189 FKSAHKHGVLPNTKSYNI-----------------------------------MMRAFCF 213
F + GV PNT +YN M++ +C
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GD A + N M +RG ++ +Y +++G C A+ +L+ M + G PD S
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT L+ C+ K+ A+ L M G P+ V Y ++ G+C++ + A +LE M
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+GC PN+ +Y L+ GL Q F A++ ++MI +G P+ A+I G C G
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
A + ++++ G P+ T+ ++ + G+E K+ E N ++E G
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRAL--GQE-GKVEEAENLFAELERHG 665
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ +L TY +IK Y +S AL+ M + CKP ++ + + AF
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI-CGFCKISKMESAF 515
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF G+ PN +Y ++ +C + + A +L M G P+V++Y +L+ GL
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ + A +L + M+ +G P+ ++YT +++ LC+ A ++ +M +GC P++
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y++++ +EG+ +A + ++ +G +P+ ++Y ++ G + A ++
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 367 MISKGFSPHFSVSHALIKGFCN 388
MI G P LIKG N
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKN 717
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 33/318 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y + D A M C+P + N ++ L T +N A +L K
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVM 591
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN +Y M+ C NG S+A +FNKM E+G +P++ +Y L++ L ++ +V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L ++ G +PD ++Y ++ + K+ A+ L RM GC P + Y +
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNL-VSYRT------------------------- 346
+ G E D + L +P +PN Y+T
Sbjct: 712 IKGLKNEYLLAD--QRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 347 --LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LV L G + A + + MIS+G P ++L+ V VD A GV + +
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 405 AGEAPHEDTWVMIVPQIC 422
G H + + ++ +C
Sbjct: 828 QGCEVHLNGYKELICALC 845
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + + + G+ + +Y L+ L R +D ML++G P+ L Y ++N+L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + +A ++ ++ +PD Y +++LG CR+ A +V M GC PN
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y TL+ GLCD G + A ++ MI G P I C++G ++A + +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ G P+ T+ ++ +C
Sbjct: 346 MKNKGCEPNVYTYTALISGLC 366
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 29/328 (8%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R + TY +LI L + FS +++ + E + P++ TY +I ++ A
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE--GIFPNVVTYTAMIDGLCKNGSTSLA 619
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
L+ F M+E C P + ++ L + A +LF +HG++P+ +Y M+
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRAL-GQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV--NRAVDLLEDMLNKGF 267
A+ +G + A+ +M + G P + +Y +L++GL + + R L + + N F
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738
Query: 268 VPDTLSY----------------------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
T L+++L + EA +LL M +G PD
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN+++ R A V + M + GC +L Y+ L+ LC A+ +
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M+ + ++P V LI G G D
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKD 886
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ S K+ + L + G + Y+ +++ R G M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PNL+ Y ++ LC G A+ M+ + SP ++I G C +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V ++ K G P+ T+ ++ +C + + +++ E++
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L M +G+ PD E+Y L+ L R V+ A+ + + M +G Y L+
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+LC+ + +EA M ++ NPD V ++ G R+G + L M + +P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
Query: 340 NLVSYRTLV 348
+ Y L
Sbjct: 903 SFHIYTILA 911
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 142/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M G PDV +Y +
Sbjct: 154 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSV 213
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 214 LINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 273
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 274 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAF 333
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 334 XHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEF 393
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 394 CKKGDVWKGSKLLKEM 409
>gi|125553201|gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 173/384 (45%), Gaps = 42/384 (10%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H + ++ +L RA+ F L+ +L L S P+ P++F +I ++ PD A+
Sbjct: 58 HDHPFAACVLYRLARARLFPLVPPLLAALHSRGAPLRPTVFAAVIDHLGAASCPDAAVGV 117
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
FR++ F C + +L LV++ A D+ A K GV N SYNI+++ C
Sbjct: 118 FRTVPAF-CSHSAATFHSLLNALVSN-GRTDAARDMLPLAPKLGVRLNAVSYNIILKGVC 175
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
A + ++M RGV P V ++ L+ CR+ ++ A L+++M +G P+
Sbjct: 176 LRDGFMGARGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAA 235
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH------------------------ 308
+Y L+ LC + +A KL+ M+ +GC D+V+
Sbjct: 236 TYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAM 295
Query: 309 -----------YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
YN ++ C GRA +A + L +M G +P +YR LV G C F
Sbjct: 296 RKRKLKPDDASYNILIRCLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDF 355
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+ + M++ G P L +G GK +EA VLE++ + + D W +
Sbjct: 356 DLGLRVFNAMMASGHCPQARTFRHLARGLGEDGKAEEAFFVLEQMARREMSLDADGWQAV 415
Query: 418 VPQI---CAGEEMEKLGEVLNEIV 438
V + C+ + E +++NE+V
Sbjct: 416 VTCVRSSCSTQASEI--KLVNELV 437
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 173/343 (50%), Gaps = 3/343 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
L F +AS+QP +RHS Y +I LG+ + F + ++ ++ E+ Y +TP +F
Sbjct: 146 LGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIV 205
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A + +A++ M ++ C+P +L+ L + + ++ A LF+
Sbjct: 206 LMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGS-VKEAASLFEDMRVR 264
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
PN + + ++ +C G I A + ++ E G PD+ Y L+ G + ++ A
Sbjct: 265 -FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDA 323
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL +M P+ S+T L+ S C+ +K+ EA ++ M+ GC D+V Y T++ G
Sbjct: 324 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 383
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G A ++L+DM G P+ +SY ++ + + + ++ M G P
Sbjct: 384 FCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 443
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ + +I+ C +G + EA + E+ G P DT++++V
Sbjct: 444 LNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMV 486
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++MR F + A + ++M + G PD + L+ LC+ V A L EDM
Sbjct: 203 FIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 262
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ F P+ +T+LL CR+ K+ EA +L ++K G PDIV YN ++ G+ + G+
Sbjct: 263 VR-FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMR 321
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA +L +M C PN S+ L+ C D A + M G LI
Sbjct: 322 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 381
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFC G D+A +L+++++ G P + +++ I+ EE+E+ E++ E+ K+
Sbjct: 382 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 441
Query: 444 GDTRIVEAGIGL 455
D I I L
Sbjct: 442 PDLNIYNTMIRL 453
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 16/365 (4%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
PN RH S L+ R +L+ +K + ++ L+ YA++
Sbjct: 267 PNLRHFTS----LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRD 322
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A M + NC P +++ + A +F G + +Y ++
Sbjct: 323 AFDLLAEMKKVNCGPNAASFTILIQSFCKTEK-MDEAMRIFTEMQGSGCEADVVTYTTLI 381
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G+ AY + + M ++G P SY +M +K ++ ++L+E+M G V
Sbjct: 382 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 441
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD Y T++ +C+ L+EA +L M+ G NP + Y +V GF +G ++AC
Sbjct: 442 PDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDY 501
Query: 329 LEDMPSNGCL--PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++M G L P + + L L ++AK M +KG + S I
Sbjct: 502 FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHAL 561
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ G V EAC +++ A P DT+ + M L ++ + + VEI
Sbjct: 562 FSNGHVKEACSYCLDMMDADLMPQPDTFAKL---------MRGLKKLFHRQLAVEITEKV 612
Query: 447 RIVEA 451
R + A
Sbjct: 613 RKMAA 617
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 10/318 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY----LRPAFDL 188
F I Y+++ A K F ML+ P N L ++ + ++ L A +
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMP-----NNPLYTVLINGHFKAGNLMEALSI 511
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F+ H GVLP+ ++ + + NG + A +F+++ E+G++PDV +Y L+ G C+
Sbjct: 512 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 571
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ +V +A +L ++M KG P+ Y L++ LC+ ++ A KL M KG PD V
Sbjct: 572 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 631
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+T++ G+C+ +A + +MPS G P+ Y LV G C +G + A + M+
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
KGF+ S + LI G+C K+ EA + +E++ P T+ ++ C +ME
Sbjct: 692 QKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 750
Query: 429 KLGEVLNEIVKVEIKGDT 446
+ + E+ + + DT
Sbjct: 751 EANLLFKEMQERNLIVDT 768
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ N +YN+++ C G + A + M G P+ ++ +L++G CR+ + RA
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 333
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++LL++M + VP +SY ++N LC K L A KLL +M G P++V Y+T+++G
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 393
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ EGR +A ++L+ M +G P++ Y ++ L G + A Y+ + +G P
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 453
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKL 430
A I G+ GK+ EA +E+L G P+ + V+I AG ME L
Sbjct: 454 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 4/324 (1%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
I D++++ P+ + LI + ++A + + M+ CKP + ++E
Sbjct: 266 IKDVMVSCG---IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 322
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
N R A +L K ++P+ SY M+ C D+S+A L KM G+
Sbjct: 323 GYCREHNMGR-ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 381
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P+V Y L+ G + ++ A LL+ M G PD Y +++ L + K+ EA
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L ++ +G PD V + +LG+ + G+ +A K ++M +G +PN Y L+ G
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A + + + G P A I G G+V EA V EL + G P T
Sbjct: 502 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Query: 414 WVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ C E+EK E+ +E+
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEM 585
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 162/395 (41%), Gaps = 58/395 (14%)
Query: 64 RVQ---KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
RVQ K+ + + L ++F Y+S F K F L D++ +
Sbjct: 539 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV----------EKAFELHDEMCLK 588
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ P++F Y L+ +S RA K F M E +P + +++
Sbjct: 589 ------GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 642
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N + AF LF GV P++ YN ++ C GD+ A LF +M ++G + S
Sbjct: 643 EN-VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-S 700
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA-------- 290
+ L+ G C+ ++ A L ++M+ K +PD ++YTT+++ C+ K+ EA
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 760
Query: 291 ---------------------------YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ L +M KG PD V Y V+ C+E +
Sbjct: 761 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 820
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A K+ +++ G L + L+ LC + A K + M G P + L+
Sbjct: 821 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ F GK+DEA V E + G P T + +V
Sbjct: 881 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 915
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 159/335 (47%), Gaps = 19/335 (5%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
S++D +L ++ + +P +F LI Y + D A F F K N
Sbjct: 139 SILDSVLFWFRN-YGGSSPVVFDILIDSYKRMGMLDEAANVF-----FVAK------NDS 186
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ + + N LR S + G++PNT +Y I+ C ++ A F +M + G
Sbjct: 187 ILISLIRCNSLR-------SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 239
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ PD + L+ G R+ ++ + + + M++ G + ++Y L++ LC+ K+ +A
Sbjct: 240 LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAA 299
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++L M GC P+ + ++ G+CRE A ++L++M +P+ VSY ++ GL
Sbjct: 300 EILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL 359
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C +A K ++ M G P+ V LI G+ + G+++EA +L+ + +G AP
Sbjct: 360 CHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDI 419
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ I+ + +ME+ L EI +K D
Sbjct: 420 FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV P+ YN ++ G + A T ++ RG+ PD ++ + G + ++ A
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 473
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++ML+ G +P+ YT L+N + L EA + + G PD+ + + G
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ GR +A KV ++ G +P++ +Y +L+ G C QG + A + M KG +P+
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ +AL+ G C G + A + + + + G P T+ ++ C E + + + +
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653
Query: 436 EI 437
E+
Sbjct: 654 EM 655
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
C L M G +PN +Y + GLC + AK + M G P ++ ALI G
Sbjct: 194 CNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 253
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
F G +DE + + ++ G + T+ +++ +C +MEK E+L ++ + K +
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 446 TR 447
+R
Sbjct: 314 SR 315
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 159/319 (49%), Gaps = 7/319 (2%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN-YLRPA 185
P T + T L++ +N + A F ML P + ++ V+ RN +L A
Sbjct: 288 PDTTTYNTLLVESCRNNNFLE-AKDIFSDMLHRGVSPDLISFSSLIG--VSSRNGHLDQA 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F+ G++P+ Y I++ +C NG +S A + +KM E+G DV +Y ++ G
Sbjct: 345 LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNG 404
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+K + A L ++M+ +G VPD ++TTL++ C++ + +A L M K PD
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ GFC+ A ++ +M S PN +SY LV G C+ G A +
Sbjct: 465 IVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWD 524
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI KG P + +IKG+C G + +A L +++ G P T+ ++ GE
Sbjct: 525 EMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584
Query: 426 EMEKLGEVLNEIVKVEIKG 444
M+K ++N K+E KG
Sbjct: 585 YMDKAFFLIN---KMETKG 600
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 1/287 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI Y + + AL+ MLE C N IL L + L A LF
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLC-KKKLLADANALFDE 420
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV+P+ ++ ++ C G++ A +LF M ++ + PD+ +Y IL+ G C+ ++
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A +L +M+++ P+ +SY L+N C + EA++L M KG P +V NT
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
V+ G+CR G A + L M S G P+ ++Y TL+ G D A + M +KG
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + ++ GFC G++ EA +L ++++ G P T+ ++
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 3/319 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+LFTY +I + RA F ML P N +L + N+L A D
Sbjct: 253 PTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLE-AKD 311
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F GV P+ S++ ++ NG + A F M G++PD Y IL+ G C
Sbjct: 312 IFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYC 371
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A+++ + ML +G D ++Y T+LN LC+KK L +A L M +G PD
Sbjct: 372 RNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFC 431
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ T++ G C+EG A + M P++V+Y L+ G C + A + M
Sbjct: 432 TFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM 491
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
IS+ P+ L+ G+CN+G V EA + +E+++ G P T ++ C ++
Sbjct: 492 ISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDL 551
Query: 428 EKLGEVLNEIVKVEIKGDT 446
K E L +++ + D+
Sbjct: 552 SKADEFLGKMISEGVGPDS 570
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF++ S G+ P +YN ++ C G A +FN+M G+ PD +Y
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR + A D+ DML++G PD +S+++L+ R L +A MK G
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y ++ G+CR G +A ++ + M GC ++V+Y T++ GLC + + A
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ +G P F LI G C G + +A + + + P T+ +++
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C EMEK E+ NE++ +I
Sbjct: 476 CKTTEMEKANELWNEMISRKI 496
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + +AL F M + N KP N +++ + A +L+
Sbjct: 433 FTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE-MEKANELWNEM 491
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN SY I++ +C G +S A+ L+++M +G+ P + + +++G CR +
Sbjct: 492 ISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDL 551
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A + L M+++G PD+++Y TL+N + + + +A+ L+ +M+ KG PD+V YN +
Sbjct: 552 SKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVI 611
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFCR+GR +A +L M G P+ +Y TL+ G Q A ++ M+ +GF
Sbjct: 612 LNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGF 671
Query: 373 SP 374
P
Sbjct: 672 VP 673
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 179/391 (45%), Gaps = 11/391 (2%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
++ N ++P P ++ D L ++I R + R S++ LIL++ R
Sbjct: 42 TLENCQNPNQEPTS-----SAPPDSFLVEKILLNLRRVRSKRLSDAQ--TLILRMIRRSG 94
Query: 111 FSLIDDI--LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
S ++ + LI++ S V +F LI+ Y ++ + TF+ +
Sbjct: 95 VSRVEIVESLISMSST-CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINAC 153
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +L LV ++ A++++ + G+ N + NIM+ A C + I M
Sbjct: 154 NSLLGGLV-KMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDME 212
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
++G+ D+ +Y L+ CR+ + A +++ M KG P +Y ++N LC+K +
Sbjct: 213 QKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A + M G +PD YNT+++ CR ++A + DM G P+L+S+ +L+
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G G D A Y + M + G P + LI G+C G + EA + +++L+ G A
Sbjct: 333 GVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCA 392
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ I+ +C + + + +E+V+
Sbjct: 393 LDVVAYNTILNGLCKKKLLADANALFDEMVE 423
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 5/216 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRP 184
+ P + TY LI + ++ ++A + + M+ K P ++ IL + ++
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISR--KIFPNHISYAILVNGYCNLGFVSE 518
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF L+ + G+ P + N +++ +C +GD+S A KM GV PD +Y L+
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G + +++A L+ M KG PD ++Y +LN CR+ +++EA +L +M +G +P
Sbjct: 579 GFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDP 638
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
D Y T++ G+ + +A + ++M G +P+
Sbjct: 639 DRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 98/217 (45%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ + ++N D + + KGF+ + +LL L + + A+++ +
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G ++ N +V C++ + D L DM G ++V+Y TL+ C +G+
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M M KG P +A+I G C G+ A GV E+L G +P T+ ++
Sbjct: 238 EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
+ C + ++ ++++ + D + IG+
Sbjct: 298 VESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFV--PDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ L+ + R+S V+R V+++E +++ D L + L+ S + +KL E +
Sbjct: 83 QTLILRMIRRSGVSR-VEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKIL 141
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ KG I N+++ G + G A +V ++ +G N+ + +V LC
Sbjct: 142 RRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKI 201
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D K ++ M KG + LI +C G + EA V+ + G P T+ +
Sbjct: 202 DDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAV 261
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +C + V NE++ + + DT
Sbjct: 262 INGLCKKGRYVRAKGVFNEMLSIGLSPDT 290
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + L +R + M E C P + I++ + +L A ++
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG-ICKEGHLEVANEILNRM 312
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G+ PN YN +++ C A L ++MF++ D ++ IL+ C+ V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+R ++LLE ML+ G +PD ++YTT++N C++ + EA LL M GC P+ V Y V
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C GR +DA +++ M GC PN V++ TL+ LC +G+ + A + ++ M+ G
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP +I G GK +EA +L ++ G +P+ + I + + K+ +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 433 VLNEIVKVEIKGDTRIVEAGI 453
+ + I I+ D + A I
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVI 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ E D A+ R + F C+ N +L+ L + + +L +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW-GDVEELMDEMVRV 245
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
PN ++N ++ C NG + + +M E G PD+ Y ++ G+C++ + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L M + G P+ + Y T+L LC ++ +EA +LL M K C D V +N +V
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G ++LE M S+GC+P++++Y T++ G C +G+ D A ++ M S G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++KG C+ G+ +A ++ ++++ G P+ T+ ++ +C +E+ E+L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 436 EIV 438
+++
Sbjct: 486 QML 488
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +T+ +++ AL+ M C P+P + ILE + R
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF-RN 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ + ++ H G +T + N+++ A C G + A L K+ G D+ SY +++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + +L+++M+ P+ +++ TL+ LCR +++L +M GC P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------- 351
DI Y T++ G C+EG A ++L MPS G PN+V Y T++ GL
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 352 ----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
C G+ D + ++ M+S G P +I GFC
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E+++++++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y ++ L A+ + +++L + + P+ F
Sbjct: 304 VANEILN---RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ ML C P ++ + A L KS
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF-CKEGLIDEAVMLLKSMSS 419
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C G A L ++M ++G P+ ++ L+ LC+K V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC + D A + M+S G P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LIKG + G EA +L EL G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN M+ +C G ++ A L + V P+ ++ +++GLC + ++ A+++L++M
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG P Y +L + CR R + ++L M KGC D + N V+ C +G
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + GC ++VSY ++ GLC + ++ M M+ +P+ + L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I C G + VL ++ + G P + I+ IC +E E+LN +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 112 SLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L+D ++ L+ + P + TY +I + + L D A+ +SM CKP
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
+L+ L + ++ A +L + G PN ++N ++ C G + A L +M
Sbjct: 430 TIVLKGLCSAGRWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL----------- 277
G PD+ SY ++ GL + + A++LL M+NKG P+T+ Y+++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 278 ------------------------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
++SLC++ + A M GC P+ Y ++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 314 LGFCREGRAIDACKVLEDMPSNGCL 338
G EG A +A ++L ++ S G L
Sbjct: 609 KGLASEGLAKEAQELLSELCSRGAL 633
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y ++ G CR Q+ A L + P+ ++ ++ LC + ++ +A ++L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KGC P Y+ ++ CR G ++ +VLE M + GC + + ++ +C+QG
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A ++ + G +A++KG C + + +++E+++ AP+ T+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ +C E++ EVL ++ + D R+
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + L +R + M E C P + I++ + +L A ++
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG-ICKEGHLEVANEILNRM 312
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G+ PN YN +++ C A L ++MF++ D ++ IL+ C+ V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+R ++LLE ML+ G +PD ++YTT++N C++ + EA LL M GC P+ V Y V
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C GR +DA +++ M GC PN V++ TL+ LC +G+ + A + ++ M+ G
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP +I G GK +EA +L ++ G +P+ + I + + K+ +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552
Query: 433 VLNEIVKVEIKGDTRIVEAGI 453
+ + I I+ D + A I
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVI 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ E D A+ R + F C+ N +L+ L + + +L +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW-GDVEELMDEMVRV 245
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
PN ++N ++ C NG + + +M E G PD+ Y ++ G+C++ + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L M + G P+ + Y T+L LC ++ +EA +LL M K C D V +N +V
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G ++LE M S+GC+P++++Y T++ G C +G+ D A ++ M S G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++KG C+ G+ +A ++ ++++ G P+ T+ ++ +C +E+ E+L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 436 EIV 438
+++
Sbjct: 486 QML 488
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +T+ +++ AL+ M C P+P + ILE + R
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF-RN 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ + ++ H G +T + N+++ A C G + A L K+ G D+ SY +++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + +L+++M+ P+ +++ TL+ LCR +++L +M GC P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------- 351
DI Y T++ G C+EG A ++L MPS G PN+V Y T++ GL
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 352 ----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
C G+ D + ++ M+S G P +I GFC
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E+++++++
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y ++ L A+ + +++L + + P+ F
Sbjct: 304 VANEILN---RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ ML C P ++ + A L KS
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF-CKEGLIDEAVMLLKSMSS 419
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C G A L ++M ++G P+ ++ L+ LC+K V +
Sbjct: 420 CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQ 479
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 480 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIAC 539
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC + D A + M+S G P
Sbjct: 540 ALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LIKG + G EA +L EL G
Sbjct: 600 NESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN M+ +C G ++ A L + V P+ ++ +++GLC + ++ A+++L++M
Sbjct: 81 AYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG P Y +L + CR R + ++L M KGC D + N V+ C +G
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + GC ++VSY ++ GLC + ++ M M+ +P+ + L
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I C G + VL ++ + G P + I+ IC +E E+LN +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 112 SLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L+D ++ L+ + P + TY +I + + L D A+ +SM CKP
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
+L+ L + ++ A +L + G PN ++N ++ C G + A L +M
Sbjct: 430 TIVLKGLCSAGRWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL----------- 277
G PD+ SY ++ GL + + A++LL M+NKG P+T+ Y+++
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548
Query: 278 ------------------------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
++SLC++ + A M GC P+ Y ++
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608
Query: 314 LGFCREGRAIDACKVLEDMPSNGCL 338
G EG A +A ++L ++ S G L
Sbjct: 609 KGLASEGLAKEAQELLSELCSRGAL 633
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y ++ G CR Q+ A L + P+ ++ ++ LC + ++ +A ++L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KGC P Y+ ++ CR G ++ +VLE M + GC + + ++ +C+QG
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A ++ + G +A++KG C + + +++E+++ AP+ T+
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ +C E++ EVL ++ + D R+
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 223/476 (46%), Gaps = 42/476 (8%)
Query: 12 IVTTVTGAVTFPPK--------TPSLIFCYSSSSQESPSSPE----------QQQESSIS 53
I+ + + FP K T L FC + + +P S + +Q+ SI
Sbjct: 4 IIRHSSASRIFPAKIDRNCIFSTTHLPFCTYNPTCTAPISNDFDPLIISDLISRQQWSIL 63
Query: 54 NSKSPIGSPCR-VQKLIASQS-DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
S SP + +L+ S DPLL F+++ R+ N +S L+ L AK++
Sbjct: 64 KSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHY 123
Query: 112 SLIDDIL------------------ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
I IL +++ S + + L+ Y E++ L+ F
Sbjct: 124 PKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAF 183
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ ++ K N +L LV + F ++K + + PN ++N ++ C
Sbjct: 184 KRAGDYRYKLSVLSCNPLLSALVKENEFGGVEF-VYKEMIRRKISPNLITFNTVINGLCK 242
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR---AVDLLEDMLNKGFVPD 270
G ++ A + + M G P+V +Y L+ G C+ +V + A +L++M+ P+
Sbjct: 243 VGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPN 302
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++++ L++ C+ + L A K+ M+ +G P +V YN++V G C EG+ +A +L+
Sbjct: 303 SVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD 362
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M S+ PN+++Y L+ G C + + + A++ + +G +P+ + L+ G+C G
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFG 422
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
K++EA + + +L+ G P+ T+ ++ C +ME++ +LNE+ +K DT
Sbjct: 423 KMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 6/326 (1%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GR D IL + F LI + + ALK F M KP
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N ++ L + L A L + PN +YN ++ +C + A L
Sbjct: 337 TVVTYNSLVNGL-CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F+ + ++G+ P+V ++ L+ G C+ ++ A L + ML KGF+P+ +Y L+ CR
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ K+ E LL M+ +G D V YN ++ +C + A +++++M G P+ ++
Sbjct: 456 EGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ G C +G A + M +G + + LI+G+C GK+++A G+L E+L
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEML 575
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEK 429
+ G P+ T+ +I E MEK
Sbjct: 576 EKGLIPNRTTY-----EIIKEEMMEK 596
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 164/341 (48%), Gaps = 14/341 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT---FRSMLE 158
KL +A ++DD+ + + P++ TY LI Y + + K + M+E
Sbjct: 245 KLNKAG--DVVDDMKV------WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVE 296
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
P N +++ N L A +F+ G+ P +YN ++ C G ++
Sbjct: 297 NKVSPNSVTFNVLIDGFCKDEN-LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L ++M + P+V +Y L+ G C+K + A +L +++ +G P+ +++ TLL
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ C+ K+ EA+ L M KG P+ YN +++GFCREG+ + +L +M G
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
+ V+Y L+ C++ A + + M+ KG P + L+ G+C G + A +
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL 535
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+++ K G + T+ +++ C ++E +LNE+++
Sbjct: 536 RKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 142/271 (52%), Gaps = 11/271 (4%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K ++ V PN+ ++N+++ FC + ++S A +F +M +G+ P V +Y L+ GLC
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLC 349
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++N A LL++ML+ P+ ++Y L+N C+KK L EA +L + +G P+++
Sbjct: 350 NEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI 409
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G+C+ G+ +A + + M G LPN +Y L+ G C +G + K + M
Sbjct: 410 TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM 469
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG--- 424
+G + LI +C + +A +++E+L G P T+ +++ C
Sbjct: 470 QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL 529
Query: 425 -------EEMEKLGEVLNEIV-KVEIKGDTR 447
++MEK G N + V I+G R
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
KL AK L+D++L + + P++ TY LI Y + L + A + F ++ +
Sbjct: 353 KLNEAKV--LLDEMLSS------NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N +L + AF L K + G LPN +YN ++ FC G +
Sbjct: 405 TPNVITFNTLLHGYCKFGK-MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L N+M RGV D +Y IL+ C K + +A L+++ML+KG P L+Y LLN
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY 523
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C + LR A L +M+ +G ++V YN ++ G+CR+G+ DA +L +M G +PN
Sbjct: 524 CMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNR 583
Query: 342 VSYRTLVGGLCDQGMF 357
+Y + + ++G
Sbjct: 584 TTYEIIKEEMMEKGFL 599
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
+ F + STY LI+ R + ++L ++ + LI + E P
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A + ML+ KP N +L N LR A +L K K G N +YN++
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN-LRAALNLRKQMEKEGRWANVVTYNVL 554
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++ +C G + A L N+M E+G++P+ +Y I+ E+M+ KGF
Sbjct: 555 IQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK----------------EEMMEKGF 598
Query: 268 VPD 270
+PD
Sbjct: 599 LPD 601
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 2/383 (0%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V +I Q DP+ A E+F+ ++ F+H+ STY +I KLG F ++++L+ +
Sbjct: 7 PKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM 66
Query: 122 KSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + ++ +K Y A+ F M ++C+P N I+ +LV
Sbjct: 67 RQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILV-DSG 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y A ++ G+ P+ S+ I M++FC A L N M +G +V +Y
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ G ++ + +L ML G ++ LL+ LC+K ++E KLL ++ +
Sbjct: 186 TVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR 245
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++ YN + G C++G A +++ + G P++V+Y L+ GLC F A
Sbjct: 246 GVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA 305
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ Y+ ++++G P + LI G+C G V A +L + G P E T+ ++
Sbjct: 306 EVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365
Query: 421 ICAGEEMEKLGEVLNEIVKVEIK 443
+C E + + NE + IK
Sbjct: 366 LCHEGETNRALALFNEALGKGIK 388
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 175/349 (50%), Gaps = 17/349 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ +P N+ IL+ + YF + + ++ +TP ++++ I++
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSILV----DSGYFDQAHKVYMRMRDR--GITPDVYSFTIRM 153
Query: 140 --YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDLFKSAH 193
+ ++ P AL+ +M C ++N + V N+ ++LF
Sbjct: 154 KSFCRTSRPHAALRLLNNMSSQGC-----EMNVVAYCTVVGGFYEENFKDEGYELFGKML 208
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
GV ++N ++ C GD+ L +K+ +RGV+P++ +Y +QGLC+K +++
Sbjct: 209 ASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELD 268
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
AV ++ ++++G PD ++Y L+ LC+ K +EA L ++ +G PD YNT++
Sbjct: 269 AAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+C+ G A ++L + NG +P+ +YR+L+ GLC +G + A + KG
Sbjct: 329 AGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P+ + + LIKG N G + EA + E+ + G P T+ ++V +C
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
+ E N D + F ML N++L +L + ++ L K GVLP
Sbjct: 191 FYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGD-VKECEKLLDKVIKRGVLP 249
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N +YN ++ C G++ A + ++ ++G PDV +Y L+ GLC+ S+ A L
Sbjct: 250 NLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYL 309
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++N+G PD+ +Y TL+ C+ ++ A ++L G PD Y +++ G C E
Sbjct: 310 GKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHE 369
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G A + + G PN++ Y TL+ GL +QG+ A + M KG P
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTF 429
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ L+ G C +G V +A G+++ ++ G P T+ +++ +ME E+L+
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+LFTY I+ + D A++ +++ KP N ++ L + +
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAE 306
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K ++ G+ P++ +YN ++ +C G + +A + G +PD +YR L+ G
Sbjct: 307 VYLGKLVNE-GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDG 365
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + + NRA+ L + L KG P+ + Y TL+ L + + EA +L M KG P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N +V G C+ G DA +++ M S G P++ ++ L+ G Q + A + +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+M+ G P ++L+ G C K ++ + +++ G AP+ T+ +++ +C
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYH 545
Query: 426 EMEKLGEVLNEI 437
+++K +L E+
Sbjct: 546 KLDKALGLLEEM 557
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 41/381 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI + L + IL+ + P FTY LI +RAL F
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGF--VPDEFTYRSLIDGLCHEGETNRALALFN 380
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
L KP N +++ L +++ + A L + G++P +++NI++ C
Sbjct: 381 EALGKGIKPNVILYNTLIKGL-SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G +S A L M +G PD+ ++ IL+ G + ++ A+++L+ M++ G PD +Y
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTY 499
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+LLN LC+ K + + M KGC P++ +N ++ CR + A +LE+M +
Sbjct: 500 NSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKN 559
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFD------------------------------------ 358
P+ V++ TL+ G C G D
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVT 619
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+A+K Q M+ + P ++ GFC G VD L E+++ G P T ++
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+C + + + +++ +V+
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQ 700
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L + F + L L +E + P FTY LI Y + + A +
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNE--GLEPDSFTYNTLIAGYCKGGMVQLAERILV 345
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ + FN +P + R L + H A LF A G+ PN YN +++
Sbjct: 346 NAV-FN-GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G I A L ++M E+G++P+V+++ IL+ GLC+ V+ A L++ M++KG+ PD +
Sbjct: 404 QGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ L++ + K+ A ++L M G +PD+ YN+++ G C+ + D + + M
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC PNL ++ L+ LC D A ++ M +K +P LI GFC G +D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 394 EA 395
A
Sbjct: 584 GA 585
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 1/230 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A ++ +GV P+ +YN ++ C + M E+G P++ ++ I
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVK 300
L++ LCR ++++A+ LLE+M NK PD +++ TL++ C+ L AY L +M +V
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+ YN ++ F + A K+ ++M P+ +YR +V G C G D+
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
K++ M+ GF P + +I C +V EA G++ +++ G P
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY L+ +++ + ++T+++M+E C P N +LE L + L A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHK-LDKA 550
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---------------- 229
L + V P+ ++ ++ FC NGD+ AYTLF KM E
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIH 610
Query: 230 --------------------RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
R + PD +YR+++ G C+ V+ L +M+ GF+P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-V 328
+ ++N LC + ++ EA ++ RM KG P+ V NT+ F + + + A K V
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI---FDHDKKEVAAPKLV 725
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQ 354
LED+ C+ +Y L GL D+
Sbjct: 726 LEDLLKKSCI-TYYAYELLFDGLRDK 750
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 146/263 (55%), Gaps = 1/263 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ AL M E + K N I++ L +++ A +LF H G+ P+ +Y+
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYSG 116
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ +FC +G + A L M ER + PDV ++ L+ L ++ +V+ A ++ DML +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P T++Y ++++ C++ +L +A ++L M K C+PD+V ++T++ G+C+ R +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ +M G + N V+Y TL+ G C G D A+ + +MIS G +P++ +++
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 387 CNVGKVDEACGVLEELLKAGEAP 409
C+ ++ +A +LE+L K+ P
Sbjct: 297 CSKKELRKAFAILEDLQKSEVCP 319
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 156/304 (51%), Gaps = 7/304 (2%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+AL M+E +P +N + ++ T A +L + + + YN +
Sbjct: 28 QALALVDRMVEEGHQPYGTIINGLCKMGDT-----ESALNLLSKMEETHIKAHVVIYNAI 82
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C +G A LF +M ++G+ PDV +Y ++ CR + A LL DM+ +
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++++ L+N+L ++ K+ EA ++ M +G P + YN+++ GFC++ R DA +
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L+ M S C P++V++ TL+ G C D + M +G + LI GFC
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
VG +D A +L ++ +G AP+ T+ ++ +C+ +E+ K +L ++ K E+ R
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVC--PR 320
Query: 448 IVEA 451
IV+A
Sbjct: 321 IVQA 324
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ ++ +M C G + A L ++M E G P Y ++ GLC+ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++LL M + Y +++ LC+ A L M KG PD++ Y+ ++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FCR GR DA ++L DM P++V++ L+ L +G A++ M+ +G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+++I GFC ++++A +L+ + +P T+ ++ C + ++ E+
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 436 EIVKVEIKGDT 446
E+ + I +T
Sbjct: 241 EMHRRGIVANT 251
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P FTY +I + + D AL+ F M + C+P + ++ L + A
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD-SGRVNEA 304
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL + HG+LP + + A C G A+ LF M +G P+V +Y L+ G
Sbjct: 305 FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 364
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + A+ L M G P+T++Y L+N L ++++ A+ +L M GC+P+
Sbjct: 365 LCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G+C G A V+ +M G NLV+Y T++ G CD G A + +
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 484
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
LM G P LI GFC + K++ A G+ E++ G P+E T+ ++ C E
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544
Query: 426 EMEKLGEVLNEI 437
+++ +L +
Sbjct: 545 KLDTATSLLEHM 556
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY LI S + A+ F M P N ++ +LV +R ++ AF
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR-IKYAFV 411
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG---------------- 231
+ ++G PN +YN M++ +C GD A + N M +RG
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471
Query: 232 -------------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
PD SY L+ G C+ S++ A L +M++ G P+ +
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT L++ C+ +KL A LL MK GC P++ YN ++ G ++ A ++ + M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN+V+Y ++ GLC G +A + MI +G P+ +LI+ GKV
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+EA + EL + G P E T+V ++ ++E L ++K
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 7/354 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESN 144
Q R Y L++ L R + + D + SE V P+L Y I A + N
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE--GVQPNLLIYNAVINALCKDGN 230
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ D A + + E P ++ L ++ L A +F K G PNT +Y
Sbjct: 231 VAD-AETIMKKVFESEMSPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ ++ C +G ++ A+ L +M G++P + + LC A L DM N
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P+ +YT L++ LC L+ A L RM G P+ V YN ++ R
Sbjct: 349 KGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A VL M NGC PN+V+Y ++ G C G A M M+ +G S + + +IK
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G+C+ G A +L+ + G P E ++ ++ C +ME + NE+V
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 127/254 (50%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D + GV PN YN ++ A C +G+++ A T+ K+FE + PD +Y ++ G
Sbjct: 200 MDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILG 259
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CRK ++ A+ + M +G P+T++Y+TL+N LC ++ EA+ L+ M + G P
Sbjct: 260 HCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPT 319
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ C G DA ++ DM + GC PN+ +Y L+ GLC G+ VA
Sbjct: 320 AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFH 379
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P+ +ALI ++ A VL + + G +P+ T+ ++ C
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439
Query: 426 EMEKLGEVLNEIVK 439
+ +K V+N +++
Sbjct: 440 DPKKAMLVMNNMLQ 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 58/411 (14%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKL---GRA-KYFSLIDDILITLKSEHYPVTP 130
A ++F+ +++ PN TY LI L GR + F LI ++++ + + P
Sbjct: 269 ALQVFNQMAKEGCEPN----TVTYSTLINGLCDSGRVNEAFDLIREMIL------HGILP 318
Query: 131 SLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+ T I A ++ + A + F M C+P ++ L L+ A L
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCV-SGILKVAIGL 377
Query: 189 FKSAHKHGVLPNTKSYNI-----------------------------------MMRAFCF 213
F + GV PNT +YN M++ +C
Sbjct: 378 FHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCI 437
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GD A + N M +RG ++ +Y +++G C A+ +L+ M + G PD S
Sbjct: 438 LGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT L+ C+ K+ A+ L M G P+ V Y ++ G+C++ + A +LE M
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+GC PN+ +Y L+ GL Q F A++ ++MI +G P+ A+I G C G
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
A + ++++ G P+ T+ ++ + G+E K+ E N ++E G
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRAL--GQE-GKVEEAENLFAELERHG 665
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 3/292 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY +IK Y P +A+ +ML+ N I++ N A
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN-TTSAL 480
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G P+ SY ++ FC + A+ LFN+M + G+ P+ +Y L+ G
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +++ A LLE M G P+ +Y L++ L ++ A +L M +G P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ G C+ G A ++ M GCLPNL++Y +L+ L +G + A+
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G P +I+ + GKV+ A L ++KAG P T+ +++
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ +L TY +IK Y +S AL+ M + CKP ++ + + AF
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI-CGFCKISKMESAF 515
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF G+ PN +Y ++ +C + + A +L M G P+V++Y +L+ GL
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ + A +L + M+ +G P+ ++YT +++ LC+ A ++ +M +GC P++
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y++++ +EG+ +A + ++ +G +P+ ++Y ++ G + A ++
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 367 MISKGFSPHFSVSHALIKGFCN 388
MI G P LIKG N
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKN 717
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 33/318 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y + D A M C+P + N ++ L T +N A +L K
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVM 591
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN +Y M+ C NG S+A +FNKM E+G +P++ +Y L++ L ++ +V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L ++ G +PD ++Y ++ + K+ A+ L RM GC P + Y +
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNL-VSYRT------------------------- 346
+ G E D + L +P +PN Y+T
Sbjct: 712 IKGLKNEYLLAD--QRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 347 --LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LV L G + A + + MIS+G P ++L+ V VD A GV + +
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 405 AGEAPHEDTWVMIVPQIC 422
G H + + ++ +C
Sbjct: 828 QGCEVHLNGYKELICALC 845
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + + + G+ + +Y L+ L R +D ML++G P+ L Y ++N+L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + +A ++ ++ +PD Y +++LG CR+ A +V M GC PN
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y TL+ GLCD G + A ++ MI G P I C++G ++A + +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ G P+ T+ ++ +C
Sbjct: 346 MKNKGCEPNVYTYTALISGLC 366
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 29/328 (8%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R + TY +LI L + FS +++ + E + P++ TY +I ++ A
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE--GIFPNVVTYTAMIDGLCKNGSTSLA 619
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
L+ F M+E C P + ++ L + A +LF +HG++P+ +Y M+
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRAL-GQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV--NRAVDLLEDMLNKGF 267
A+ +G + A+ +M + G P + +Y +L++GL + + R L + + N F
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738
Query: 268 VPDTLSY----------------------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
T L+++L + EA +LL M +G PD
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN+++ R A V + M + GC +L Y+ L+ LC A+ +
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M+ + ++P V LI G G D
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKD 886
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ S K+ + L + G + Y+ +++ R G M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PNL+ Y ++ LC G A+ M+ + SP ++I G C +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V ++ K G P+ T+ ++ +C + + +++ E++
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L M +G+ PD E+Y L+ L R V+ A+ + + M +G Y L+
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+LC+ + +EA M ++ NPD V ++ G R+G + L M + +P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
Query: 340 NLVSYRTLV 348
+ Y L
Sbjct: 903 SFHIYTILA 911
>gi|255548031|ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545552|gb|EEF47056.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 193/441 (43%), Gaps = 78/441 (17%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P + ++I +Q +PL+A IF A + PN+RH+ Y +I LG + + + ++L
Sbjct: 10 TPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGRITEMKEVLD 69
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV--- 176
++ + S+F IK YA L + A+ F+++ +FNC + N +L+++V
Sbjct: 70 QMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNTLLQIMVKES 129
Query: 177 ----THRNYLRP----------------------------AFDLFKSAHKHGVLPNTKSY 204
HR +L A +F+ + G P+ SY
Sbjct: 130 KLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQGCYPDRDSY 189
Query: 205 NIMMRAFCFNGDISIA----YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
I+M C +G ++ A Y++F ++ ++G D+ YRI + LC V +A+++L
Sbjct: 190 RIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGMVEQALEVLG 249
Query: 261 DMLNKGF------------------------------------VPDTLSYTTLLNSLCRK 284
+L KG +P SYT + +
Sbjct: 250 KILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYTAMAVDFYAE 309
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE-DMPSNGCLPNLVS 343
KL +A K+L + +G P ++ Y V C+EG+ +A VLE +M C+PN+
Sbjct: 310 GKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGKVHEAINVLEVEMVEGNCVPNVRL 369
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y L+ GLCD A KY++ M + G + L+ G C G EA +LEE+
Sbjct: 370 YNILLKGLCDARNSATAVKYLKRMAKQTGCVANKETYCILVHGLCQDGGFIEASRILEEM 429
Query: 403 LKAGEAPHEDTWVMIVPQICA 423
L P DT+ M++ +C+
Sbjct: 430 LIKSYWPPVDTFNMLIRGLCS 450
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 2/212 (0%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+G+I L N+ RG +P + SY + + ++++A +L++ ++GF P L+
Sbjct: 274 DGNIETTKHLINEALIRGAIPSLSSYTAMAVDFYAEGKLSQADKVLDETQDRGFRPSLLT 333
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y + +LC++ K+ EA +L V+G C P++ YN ++ G C + A K L+ M
Sbjct: 334 YEAKVAALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRM 393
Query: 333 P-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
GC+ N +Y LV GLC G F A + ++ M+ K + P + LI+G C++G+
Sbjct: 394 AKQTGCVANKETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGR 453
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
EA LEE++ EAP W +V +C+
Sbjct: 454 QYEATMWLEEMISLDEAPELSVWNSLVTCLCS 485
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L A G +P+ SY M F G +S A + ++ +RG P + +Y + LC
Sbjct: 283 LINEALIRGAIPSLSSYTAMAVDFYAEGKLSQADKVLDETQDRGFRPSLLTYEAKVAALC 342
Query: 248 RKSQVNRAVDLLE-DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPD 305
++ +V+ A+++LE +M+ VP+ Y LL LC + A K L RM K GC +
Sbjct: 343 KEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVKYLKRMAKQTGCVAN 402
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y +V G C++G I+A ++LE+M P + ++ L+ GLC G A +++
Sbjct: 403 KETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGLCSIGRQYEATMWLE 462
Query: 366 LMISKGFSPHFSVSHALIKGFC-NVGKVDEACGVLEEL 402
MIS +P SV ++L+ C N +D C + L
Sbjct: 463 EMISLDEAPELSVWNSLVTCLCSNTADIDACCETFKRL 500
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 130 PSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PSL TY K+ A E + + M+E NC P + N +L+ L RN
Sbjct: 329 PSLLTYEAKVAALCKEGKVHEAINVLEVEMVEGNCVPNVRLYNILLKGLCDARNSATAVK 388
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + A + G + N ++Y I++ C +G A + +M + P V+++ +L++GL
Sbjct: 389 YLKRMAKQTGCVANKETYCILVHGLCQDGGFIEASRILEEMLIKSYWPPVDTFNMLIRGL 448
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
C + A LE+M++ P+ + +L+ LC
Sbjct: 449 CSIGRQYEATMWLEEMISLDEAPELSVWNSLVTCLC 484
>gi|357516331|ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
gi|355522476|gb|AET02930.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
Length = 303
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 7/306 (2%)
Query: 55 SKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
S PI SP R+ L+ SQ DP LA +IF + Q ++R+S +Y ++I KLGRAK +
Sbjct: 3 SSKPI-SPFRLSSLLRSQKDPSLAFQIF--LNPQNHYRYSILSYDLIITKLGRAKMIPQM 59
Query: 115 DDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+ IL L ++ + V L ++I YA + LP RA++TF S+ F C P K N +L
Sbjct: 60 ELILQQLHNDTRHRVPEPLLCHVISFYARARLPSRAVQTFLSIPSFRCTPTLKSFNSLLN 119
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
L+T R + F S PNT +YNI++R+ F G A LF++M V
Sbjct: 120 ALLTCRRF--QTITHFASRLSEFGPPNTCTYNILIRSCFFQGRTDRALELFDEMRRTNVC 177
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD ++ L+ GLC+ S++++A + + M+ + P YT L+ +C +L A++
Sbjct: 178 PDQVTFGTLIHGLCKDSRMHQAFGMKKLMIQEFKLKPCVSVYTNLMKGVCEIGELHRAFE 237
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ M+ G D+V YNT+V + GR +A +VLE+M +G N V+ ++G C
Sbjct: 238 IKDEMERNGLRLDVVVYNTLVNALFKAGRKEEALRVLEEMKESGYHWNSVTCNVMIGEFC 297
Query: 353 DQGMFD 358
Q F
Sbjct: 298 RQKNFQ 303
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 141 IRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 200
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++S+ + A +L ++ML KG VP+ + +TTL++ C+ ++ A ++ +M +
Sbjct: 201 LINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQS 260
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAF 320
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 321 EHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 380
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 381 CKKGDVWKGSKLLKEM 396
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 6/337 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F+ I + T +S+ Y +F+ LI Y ES A++ +R E +
Sbjct: 41 FAAIXETXGTQRSDJY-----VFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRK 95
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+LE L+ + Y + + ++ + G + +NI+M FC +GDI JA ++F+ + +
Sbjct: 96 VLEHLMKLK-YFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKW 154
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V SY LM G R ++ L ML G PD +Y+ L+N C++ K +A
Sbjct: 155 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 214
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M VKG P+ V + T++ G C+ GR A ++ + M S P+L++Y TL+ G
Sbjct: 215 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G A + M KG P LI G C G +D A + +++
Sbjct: 275 LCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLD 334
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
E + ++ +C ++L E++ V +K D R
Sbjct: 335 EVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDAR 371
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 100 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPS 159
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C A LF
Sbjct: 160 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELF 218
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ + L+ G C+ +V+ A+++ + ML++ PD ++Y TL+ LC+K
Sbjct: 219 DEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 278
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M KG PD + Y T++ G C+EG A + + M + V Y
Sbjct: 279 GDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXY 338
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 339 TALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 398
Query: 405 AGEAP 409
G P
Sbjct: 399 DGHVP 403
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 106/201 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF G++PN + ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 214 ANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 273
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+K + +A L+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 274 GLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRL 333
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y ++ G C EGR++DA K+L +M S G P+ +Y ++ C +G K +
Sbjct: 334 DEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 393
Query: 365 QLMISKGFSPHFSVSHALIKG 385
+ M G P + L+ G
Sbjct: 394 KEMQRDGHVPSVVTYNVLMNG 414
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A L
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK-KGDLKQAHHLIDEM 291
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + D Y L+ GLC + +
Sbjct: 292 SXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRS 351
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PD +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 352 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 411
Query: 313 VLG 315
+ G
Sbjct: 412 MNG 414
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 177/353 (50%), Gaps = 2/353 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
+ H+ S L +I ++++F+ + +SE L+ +I Y +S D ++
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSI 114
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M++ P N +L +V ++ + F + K V + S+ I+++
Sbjct: 115 SYFNEMVDKGFVPGSNCFNNLLTFVVGSSSF--NQWWRFFNESKIKVDLDVYSFGIVIKG 172
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G+I ++ L ++ E G P+V Y L+ G C++ ++ +A DL +M G V +
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVAN 232
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT L++ L + ++ +++ +M+ G P++ YN V+ C++GR DA K+ +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFD 292
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G N+V+Y TL+GGLC + + A K M M S G +P+ + LI GFC VG
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
K+ +A + +L G +P T+ ++V C + G+V+ E+ + IK
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 1/307 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D+L+ L+ + ++T LI + ++A F M +F ++ L
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + F++++ + GV PN +YN +M C +G A+ LF++M ERGV +
Sbjct: 244 FKN-GIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCN 302
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y L+ GLCR+ + N A +++ M + G P+ ++Y TL++ C KL +A L
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+K +G +P +V YN +V GFC++G A KV+++M G P+ ++Y L+
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMD 422
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
+ A + M G +P LI GFC G+++EA + + ++ P++ +
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482
Query: 416 MIVPQIC 422
+V C
Sbjct: 483 TMVLGYC 489
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A DLF K G++ N +Y +++ NG + ++ KM E GV P++ +
Sbjct: 211 RGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYT 270
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y +M C+ + A L ++M +G + ++Y TL+ LCR+ K EA K++ +MK
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G NP+++ YNT++ GFC G+ A + D+ S G P+LV+Y LV G C +G
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ M +G P LI F + +++A + + + G P T+ +++
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450
Query: 419 PQICAGEEMEKLGEVLNEIV 438
C +M + + +V
Sbjct: 451 HGFCIKGQMNEASRLFKLMV 470
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ P+ +YNI++ FC GD S A + +M ERG+ P +Y I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ R + +A+ L M G PD +Y+ L++ C K ++ EA +L M K
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YNT+VLG+C+EG + A ++ +M PN+ SYR ++ LC + A+
Sbjct: 474 LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533
Query: 362 KYMQLMISKGFSPHFSV 378
++ MI G P S+
Sbjct: 534 GLVEKMIDTGIDPSDSI 550
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 142/300 (47%), Gaps = 7/300 (2%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH- 178
K + V P+L+TY ++ + + A K F M E N ++ L
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 179 -RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
N D KS G+ PN +YN ++ FC G + A +L + RG+ P +
Sbjct: 318 KANEANKVMDQMKS---DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ G C+K + A ++++M +G P ++YT L+++ R + +A +L M
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM 434
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ G PD+ Y+ ++ GFC +G+ +A ++ + M + PN V Y T+V G C +G
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + + M K P+ + +I+ C K EA G++E+++ G P + +I
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F S K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 IRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++MLB G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEX 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 156/325 (48%), Gaps = 1/325 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T +I L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F S+ ++ +P N ++ + + L F L GV P+ +Y+
Sbjct: 152 IRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGD-LDEGFRLKSVMQASGVHPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+PD ++Y TL+ LC+K L++A+ L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAPH 410
C G V +L+E+ + G P+
Sbjct: 391 XCKKGDVWTGSKLLKEMQRXGYVPN 415
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 158/333 (47%), Gaps = 6/333 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F+ I + T +S+ Y +F+ LI Y ES A++ +R E + +
Sbjct: 52 FAAILETKGTQRSDXY-----VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRK 106
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++E L+ + Y + + ++ + + G + +NI+M FC G+I +A ++F+ + +
Sbjct: 107 VIEHLMKLK-YFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKW 165
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P V S+ LM G + ++ L M G PD +Y+ L+N LC++ K+ +A
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDA 225
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M G P+ V + T++ G C+ GR A ++ M S LP+L++Y TL+ G
Sbjct: 226 NELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G A + M KG P LI G C G ++ A + ++K
Sbjct: 286 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXD 345
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ + ++ +C ++L E++ V +K
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM C++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G +PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ P + LI G C G + +A +
Sbjct: 239 PNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXD 345
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D A + F ML+ P +++ + + A
Sbjct: 202 VHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKN-GRVDLA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++++ +LP+ +YN ++ C GD+ A+ L ++M +G+ PD +Y L+ G
Sbjct: 261 MEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A + + M+ + D ++YT L++ LC++ + +A K+L M G P+
Sbjct: 321 XCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
I Y ++ C++G K+L++M G +PN+V+
Sbjct: 381 IGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ + +TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + +K
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYKE 132
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTT 252
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S LP+L++Y TL+ GLC +G + M KG
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG 312
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A +++++ E + ++ +C
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAE 372
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V +K D R
Sbjct: 373 KMLREMLNVGLKPDAR 388
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ + L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++ + L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M++ G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN + ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 230 DANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + + L+++M KG PD ++YTTL++ C++ L A++ +M +
Sbjct: 290 YGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M + G P+ +Y ++ C +G K
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMNG 431
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 129/241 (53%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P+ +YN ++R C A +M +G +PD +Y ++ G C+ S V A +
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
LL+D + KGFVPD ++Y +L+N LC + + A +L + KG PDIV YN++V G C
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+G + A +V+ +M GC P++ +Y ++ GLC G A M I KG+ P
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ LI G+C K+D A ++E + + G AP T+ ++ +C ++ ++ E E+
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 438 V 438
+
Sbjct: 495 I 495
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 164/354 (46%), Gaps = 36/354 (10%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL-------------E 173
P + TY LI+ + ++P A+ R M+ C P N I+ E
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314
Query: 174 LL------------VTH---------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
LL VT+ + A +LF A G+ P+ YN +++ C
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G I A + N+M E G PD+++Y I++ GLC+ ++ A ++ D + KG++PD
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ TL++ C++ KL A +L+ RM G PD + YN+V+ G C+ G+ + + ++M
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
GC PN ++Y L+ C + A K + M +G P + LI GFC G +
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ A + ++L + G + DT+ ++ M ++ +E++ + D+
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 608
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 2/299 (0%)
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
AE ++ +RAL+ F KP N +++ L + + A + + G P+
Sbjct: 340 AEGDV-ERALELFNEAQAKGIKPDIVVYNSLVKGLCL-QGLILHALQVMNEMAEEGCHPD 397
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++YNI++ C G+IS A + N +G +PDV ++ L+ G C++ +++ A+ L+E
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 457
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G PDT++Y ++LN LC+ K+ E + M +KGC+P+ + YN ++ FCR
Sbjct: 458 RMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSN 517
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ +A KV+ M G P+ VS+ TL+ G C G + A Q + KG+S +
Sbjct: 518 KMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 577
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI F + A + +E+L G T+ +++ C +++ L E++K
Sbjct: 578 TLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 636
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + Y L+K L AL+ M E C P + N ++ L N + A
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN-ISDA 417
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ A G LP+ ++N ++ +C + A L +M+E G+ PD +Y ++ G
Sbjct: 418 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +VN + ++M+ KG P+ ++Y L+ + CR K+ EA K++ +M +G +PD
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 537
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V +NT++ GFCR G A + + + G ++ TL+G + +A+K
Sbjct: 538 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 597
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+SKG LI G C VD A L E++K G P T+ ++ +
Sbjct: 598 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 657
Query: 426 EMEKLGEVLNEIVKVEI 442
+ + +++ +VK+ +
Sbjct: 658 RVFQAVGIIHIMVKIGV 674
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 66/372 (17%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV-------THRNYLR- 183
L+ I+ YA + A+ F M F C P N I++ LV H+ Y+R
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114
Query: 184 ------PAFD---------------------------------------LFKSAHKHG-- 196
P L+ H H
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 174
Query: 197 ----------VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
V PN ++N ++ A C GD+ A L K+ +RG+ ++ +Y I ++GL
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ AV L++ M VPD ++Y TL+ LC+K +EA L RM +GC PD
Sbjct: 235 CEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YNT++ G+C+ +A ++L+D G +P+ V+Y +L+ GLC +G + A +
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+KG P V ++L+KG C G + A V+ E+ + G P T+ +++ +C
Sbjct: 354 AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN 413
Query: 427 MEKLGEVLNEIV 438
+ V+N+ +
Sbjct: 414 ISDATVVMNDAI 425
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 31/308 (10%)
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
LPD + TF ++++ CK L L A L + ++G+ P+T +Y
Sbjct: 430 LPD--VFTFNTLIDGYCKRLK----------------LDSALQLVERMWEYGIAPDTITY 471
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ C G ++ F +M +G P+ +Y IL++ CR +++ A ++ M
Sbjct: 472 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 531
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G PD +S+ TL+ CR L AY L +++ KG + +NT++ F +
Sbjct: 532 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 591
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A K+ ++M S G + +YR L+ G C D A ++ MI KGF P S +I
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651
Query: 385 GFCNVGKVDEACGVLEELLKAGEAP-------HEDTWVMIVPQICAGEEMEK------LG 431
+V +A G++ ++K G P + D + P+I + M+K
Sbjct: 652 SLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTY 711
Query: 432 EVLNEIVK 439
EVL+E V+
Sbjct: 712 EVLHEGVR 719
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 208/463 (44%), Gaps = 96/463 (20%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSP-------IGSPCR---VQKLIASQS 73
PK P+L Y S + +S E S+I + P I S R + ++ Q
Sbjct: 17 PK-PTLFHSYHSRTNPIATSIEV---STIIETLDPMEDGLKVISSRIRSYTITSVLQEQP 72
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
D L +F ++ + + R LI I KL + F L +L LK+ ++ F
Sbjct: 73 DTRLGFRLFIWSLKSWHLRCRTVQDLI-IGKLIKENAFELYWKVLQELKNSAIKISSEAF 131
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
+ LI+ Y+E+ + ++A+++F M +F+CKP N IL LV +L
Sbjct: 132 SVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFL----------- 180
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+A ++N+M + + PDV +Y IL+ GLC+ +
Sbjct: 181 -------------------------LALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ L ++M ++G +P+ + Y+ +L+ LC+ KK+ +A +L +M+ GCN D++ YN ++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275
Query: 314 LGFCREGRAIDACKVLEDMPSNG---------CL-------------------------- 338
GFC+ G DA +L+ + +G CL
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P+++ Y ++ GL +G A + M +G P +ALIKGFC++G +DEA +
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAG----------EEMEKLG 431
E+ K P+ T+ +++ +C +EMEKLG
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 18/325 (5%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+T +I+ ++ AL M E +P N +++ YL A L
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFC-DMGYLDEAESLRLE 398
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
KH PN +Y+I++ C NG I+ A +F +M + G +P V ++ L+ GLC+ ++
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458
Query: 252 VNRAVDLLEDM-----------LNKGF--VPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ A L M L++G V D S ++ LC + +AYKLL ++
Sbjct: 459 LEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV 518
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PDI YN ++ GFC+ G A K+ ++M G +P+ V+Y TL+ GL G +
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M+ KG P S ++ C + A V + L+ ED V +V
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRG-WEDEKVRVV 637
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIK 443
+ EE++ + +++++IK
Sbjct: 638 AESFDNEELQT---AIRRLLEMDIK 659
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 126/307 (41%), Gaps = 48/307 (15%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
YL AF L + K G + Y ++ A+ + KM + PDV Y
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I+++GL ++ +V A+ LL +M +G PDT+ Y L+ C L EA L +
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-------- 352
C P+ Y+ ++ G C+ G A + ++M GCLP++V++ +L+ GLC
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 353 -------------------DQG---MFDVA----------------KKYMQLM--ISKGF 372
QG +FD+A K Y LM + G
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + LI GFC G ++ A + +E+ G P T+ ++ + E E
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582
Query: 433 VLNEIVK 439
+ ++VK
Sbjct: 583 IFEQMVK 589
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 40/248 (16%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ L GVLP+ ++YNI++ FC G+I+ A+ LF +M +G MPD +Y L+
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID 569
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK-------------------- 284
GL R + A+++ E M+ KG VP++ +Y T++ CR+
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGW 629
Query: 285 --------------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC---K 327
++L+ A + L M +K N D+ Y ++G + R +A
Sbjct: 630 EDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFS 689
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL+D N + V L+G LC D+A + +GF + + L+
Sbjct: 690 VLKDFKMNISSASCV---MLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLL 746
Query: 388 NVGKVDEA 395
++ + D+A
Sbjct: 747 HLDRKDDA 754
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 140 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 199
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 200 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 259
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 260 LLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAF 319
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + A+I G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 320 EHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEF 379
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 380 CKKGDVWKGSKLLKEM 395
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ R Y + + ++
Sbjct: 56 VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLR-YFKLVWGFYEE 114
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD +Y+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S LP+L++Y TL+ GLC +G + A + M KG
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG 294
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ + + I+ +C
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAE 354
Query: 432 EVLNEIVKVEIKGDT 446
++L E++ V +K DT
Sbjct: 355 KMLREMLSVGLKPDT 369
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 152/310 (49%), Gaps = 1/310 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + +YF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 99 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 158
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 159 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 217
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 218 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 277
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L +A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 278 GDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAY 337
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
++ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 338 TAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 397
Query: 405 AGEAPHEDTW 414
G P T+
Sbjct: 398 NGHVPSVXTY 407
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 153 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 211
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 212 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 271
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K +N+A L+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 272 YGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 331
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR +DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 332 LDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 391
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 392 LKEMQRNGHVPSVXTYNVLMNG 413
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 165/340 (48%), Gaps = 5/340 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K++S + + ++ + + + V P+++T LI + N A +L+
Sbjct: 62 LLTSIAKMKHYSTV--LSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILK 119
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P P ++ L + A LF G PN +Y ++ C G+ S
Sbjct: 120 LGHQPDPTTFTTLIRGLCV-EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L M + PDV Y ++ LC+ QV A +L M+ +G PD +YT+L+
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++LC + + LL +M PD+V ++TVV C+EG+ +A ++++ M G
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y TL+ G C Q D A K +M+ KGF+P LI G+C + K+D+A +
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
EE+ + P T+ ++ +C ++ + +E+V
Sbjct: 359 FEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 166/338 (49%), Gaps = 5/338 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
FS++ IL K H P P+ FT LI+ AL F M++ +P
Sbjct: 111 FSVLAKIL---KLGHQP-DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 166
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L N A L +S + P+ Y ++ + C + ++ A+ LF++M +
Sbjct: 167 LINGLCKVGNT-SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ PD+ +Y L+ LC + LL M+N +PD + ++T++++LC++ K+ EA
Sbjct: 226 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 285
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++++ M +G PD+V Y T++ G C + +A KV + M G P+++SY TL+ G
Sbjct: 286 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C D A + M K + P + L+ G C+VG++ +A + E++ G+ P
Sbjct: 346 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
T+ +++ +C +E+ +L I + D ++
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 38/330 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A++ RSM + NC+P I++ L R + AF+
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ-VTEAFN 217
Query: 188 LFKSAHKHGV-----------------------------------LPNTKSYNIMMRAFC 212
LF G+ LP+ ++ ++ A C
Sbjct: 218 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 277
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G ++ A+ + + M +RGV PDV +Y LM G C +S+++ AV + + M+ KGF PD +
Sbjct: 278 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 337
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SYTTL+N C+ K+ +A L M K PD YNT++ G C GR DA + +M
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM 397
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ G +P+LV+Y L+ LC + A ++ + + +P V + +I G C G++
Sbjct: 398 VARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 457
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ A + L G P T+ +++ +C
Sbjct: 458 EAARDLFSNLSSKGLHPSVWTYNIMIHGLC 487
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 119/237 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + G P+ SY ++ +C I A LF +M + +PD ++Y LM
Sbjct: 320 AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMH 379
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ A+ L +M+ +G +PD ++Y+ LL+SLC+ L EA LL ++ NP
Sbjct: 380 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP 439
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI YN ++ G CR G A + ++ S G P++ +Y ++ GLC +G+ + A K
Sbjct: 440 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 499
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M SP + + +GF + A +LEE+L G + T ++V +
Sbjct: 500 MEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
++P +FTY ++A NL + T N K LP + + +++ L + A
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK-EGKVTEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ + GV P+ +Y +M C ++ A +F+ M +G PDV SY L+ G
Sbjct: 286 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++++A+ L E+M K ++PDT +Y TL++ LC +L++A L M +G PD
Sbjct: 346 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y+ ++ C+ +A +L+ + ++ P++ Y ++ G+C G + A+
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 465
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P + +I G C G ++EA + E+ +P T+ I
Sbjct: 466 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 525
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
E + ++L E++ D
Sbjct: 526 ETLRAIQLLEEMLARGFSAD 545
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 20/349 (5%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
ST + + K G+ I D++I E VT +T L+ + + D A+K F
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT---YTTLMDGHCLQSEMDEAVKVFDM 326
Query: 156 MLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P ++ H+ + A LF+ + +P+TK+YN +M C
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHK--IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A LF++M RG MPD+ +Y IL+ LC+ + A+ LL+ + PD Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+++ +CR +L A L + KG +P + YN ++ G C+ G +A K+ +M
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
N C P+ +Y T+ G A + ++ M+++GFS S + L++ + G
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQS 564
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQ----------ICAGEEMEKLGEV 433
+C ++ +L + + + + +P+ C +E+ K+GEV
Sbjct: 565 SCFLMLSVL----SEDDRRYFIFIPEGFDLLGWEFMRCKLKELAKIGEV 609
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ FN + A + FN++ P + + L+ + + + + L M +
Sbjct: 26 NFHSKSLHFN-TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 84
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G P+ + L+NS C ++ A+ +L ++ G PD + T++ G C EG+ +
Sbjct: 85 FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 144
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + + M G PN+V+Y TL+ GLC G A + ++ M P + ++I
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
C +V EA + +++ G +P T+ +V +C E + + +LN++V +I
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264
Query: 445 DTRI 448
D I
Sbjct: 265 DVVI 268
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 195/408 (47%), Gaps = 14/408 (3%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P +++ S+ + P +P + L DPL A F + R NF HS +T+ L
Sbjct: 34 SRPRWRKDPSLK-TLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSL 92
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
+L L R + +++ ++ +P T+L+ + N A + L F
Sbjct: 93 LLLLVRHRTLRAAENVRNSMIKS--CTSPHDATFLLNLLRRMN-TAAAAADHQHQLAF-- 147
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
K NR+L + ++ + + L+K + + + V PN + N M+ ++C G+++
Sbjct: 148 KLSLTSYNRLL-MCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMA 206
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+A F ++ PD+ +Y L+ G CR V RA + M + + +SYT L+
Sbjct: 207 VARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLI 262
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ LC KL EA + RM+ GC P + Y +V C GR ++A + +M GC
Sbjct: 263 HGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCE 322
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+ +Y L+ LC +G D A K + M+ KG +P +ALI +C G +++A GV
Sbjct: 323 PNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGV 382
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
L + P+ T+ ++ C G+ M++ +LN++V+ ++ D
Sbjct: 383 LGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDV 430
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 162/315 (51%), Gaps = 9/315 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFTY L+ Y ++ +RA F M N ++ + E L A +
Sbjct: 222 PDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCE-----AGKLHEALE 276
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G P ++Y +++ A C +G A +LF +M ERG P+V +Y +L+ LC
Sbjct: 277 FWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLC 336
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ A+ +L +M+ KG P + + L+ S C++ + +A +L M+ K P++
Sbjct: 337 KEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVR 396
Query: 308 HYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ GFCR G+++D A +L M + P++V+Y TL+ GLC+ G+ D A + +L
Sbjct: 397 TYNELICGFCR-GKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRL 455
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
MI GFSP +A + C +G+V EA +LE L + +E + ++ C +
Sbjct: 456 MIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGK 515
Query: 427 MEKLGEVLNEIVKVE 441
+E + ++ E
Sbjct: 516 IEHAASLFKRMLAEE 530
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 22/377 (5%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY-----PVTPSLFTYLIKIYA 141
Q F+ S ++Y L++ L R FS++D+ +I+L E V P+L T + +
Sbjct: 143 HQLAFKLSLTSYNRLLMCLSR---FSMVDE-MISLYKEMLTDNGNSVFPNLITLNTMLNS 198
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP-- 199
L + A+ + C+P P +L RN D+ ++ V+P
Sbjct: 199 YCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRND-----DVERACGVFCVMPRR 253
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY ++ C G + A + +M E G P V +Y +L+ LC + A+ L
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+M +G P+ +YT L++ LC++ ++ EA K+L M KG P +V +N ++ +C+
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G DA VL M S PN+ +Y L+ G C D A + M+ SP
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE---VLNE 436
+ LI G C VG VD A + +++ G +P D W +C M ++GE +L
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFSP--DQWTFNAFMVCLC-RMGRVGEAHQILES 490
Query: 437 IVKVEIKGDTRIVEAGI 453
+ + +K + A I
Sbjct: 491 LKEKHVKANEHAYTALI 507
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 6/317 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY LI + D ALK M+E P N ++ R + A
Sbjct: 323 PNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCK-RGMMEDAVG 381
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ V PN ++YN ++ FC + A L NKM E + PDV +Y L+ GLC
Sbjct: 382 VLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLC 441
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
V+ A L M+ GF PD ++ + LCR ++ EA+++L +K K +
Sbjct: 442 EVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEH 501
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G+C+ G+ A + + M + CLPN +++ ++ GL +G A ++ M
Sbjct: 502 AYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM 561
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
P + L++ D A +L L+ +G P+ T+ + C+ +
Sbjct: 562 AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL 621
Query: 428 EKLGEVLNEIVKVEIKG 444
E+ E+ ++K++ +G
Sbjct: 622 EEAEEM---VIKIKNEG 635
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 3/311 (0%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY + + A ES AL F M E C+P +++ L + A
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCK-EGRMDEALK 346
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + GV P+ +N ++ ++C G + A + M + V P+V +Y L+ G C
Sbjct: 347 MLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFC 406
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++RA+ LL M+ PD ++Y TL++ LC + A +L M G +PD
Sbjct: 407 RGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQW 466
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ CR GR +A ++LE + N +Y L+ G C G + A + M
Sbjct: 467 TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++ P+ + +I G GKV +A ++E++ K P T+ ++V ++ +
Sbjct: 527 LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDF 586
Query: 428 EKLGEVLNEIV 438
++ E+LN ++
Sbjct: 587 DRANEILNRLI 597
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 7/309 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI E+ AL+ + M E C P + ++ L L A LF
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELE-ALSLFGEM 316
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G PN +Y +++ C G + A + N+M E+GV P V + L+ C++ +
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
AV +L M +K P+ +Y L+ CR K + A LL +M +PD+V YNT+
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTL 436
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G A ++ M +G P+ ++ + LC G A + ++ + K
Sbjct: 437 IHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ ALI G+C GK++ A + + +L P+ T+ +++ + + K G+
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI------DGLRKEGK 550
Query: 433 VLNEIVKVE 441
V + ++ VE
Sbjct: 551 VQDAMLLVE 559
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 33/352 (9%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+ +++ + ++GR IL +LK +H +T LI Y ++ + A F+
Sbjct: 469 NAFMVCLCRMGRV---GEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
ML C P N +++ L ++ A L + K V P +YNI++
Sbjct: 526 MLAEECLPNSITFNVMIDGL-RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEY 584
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
D A + N++ G P+V +Y ++ C + ++ A +++ + N+G + D+ Y
Sbjct: 585 DFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYN 644
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY-----------------NTVVLGFCR 318
L+N+ L A+ +L RM GC P + Y N V L
Sbjct: 645 LLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSL 704
Query: 319 EGRAIDACKV------------LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
++D + E M GC+PNL +Y L+ GLC G +VA
Sbjct: 705 TNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M G SP + ++L+ C +G EA +L+ +++ H +++ +++
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 34/339 (10%)
Query: 115 DDILITLKSEHYPVTPSLFTYLI---KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D +L+ + V P+L TY I ++ E + DRA + ++ +P
Sbjct: 553 DAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDF-DRANEILNRLISSGYQPNVVTYTAF 611
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
++ + + L A ++ GVL ++ YN+++ A+ G + A+ + +MF G
Sbjct: 612 IKAYCS-QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTG 670
Query: 232 VMPDVESYRILMQGLCRK--------------SQVNRAVD---------------LLEDM 262
P +Y ILM+ L + S N +VD L E M
Sbjct: 671 CEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKM 730
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G VP+ +Y+ L+N LC+ +L A+ L M+ G +P + +N+++ C+ G
Sbjct: 731 AECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMF 790
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L+ M L +L SY+ L+ GL +Q + A+ ++ G++ L
Sbjct: 791 GEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVL 850
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
I G G VD+ +L + K G H +T+ M++ ++
Sbjct: 851 IDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 208/463 (44%), Gaps = 96/463 (20%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSP-------IGSPCR---VQKLIASQS 73
PK P+L Y S + +S E S+I + P I S R + ++ Q
Sbjct: 17 PK-PTLFHSYHSRTNPIATSIEV---STIIETLDPMEDGLKVISSRIRSYTITSVLQEQP 72
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
D L +F ++ + + R LI I KL + F L +L LK+ ++ F
Sbjct: 73 DTRLGFRLFIWSLKSWHLRCRTVQDLI-IGKLIKENAFELYWKVLQELKNSAIKISSEAF 131
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
+ LI+ Y+E+ + ++A+++F M +F+CKP N IL LV +L
Sbjct: 132 SVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFL----------- 180
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+A ++N+M + + PDV +Y IL+ GLC+ +
Sbjct: 181 -------------------------LALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ L ++M ++G +P+ + Y+ +L+ LC+ KK+ +A +L +M+ GCN D++ YN ++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275
Query: 314 LGFCREGRAIDACKVLEDMPSNG---------CL-------------------------- 338
GFC+ G DA +L+ + +G CL
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P+++ Y ++ GL +G A + M +G P +ALIKGFC++G +DEA +
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAG----------EEMEKLG 431
E+ K P+ T+ +++ +C +EMEKLG
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 18/325 (5%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+T +I+ ++ AL M E +P N +++ YL A L
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCD-MGYLDEAESLRLE 398
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
KH PN +Y+I++ C NG I+ A +F +M + G +P V ++ L+ GLC+ ++
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458
Query: 252 VNRAVDLLEDM-----------LNKGF--VPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ A L M L++G V D S ++ LC + +AYKLL ++
Sbjct: 459 LEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV 518
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PDI YN ++ GFC+ G A K+ ++M G +P+ V+Y TL+ GL G +
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M+ KG P S ++ C + A V + L+ ED V +V
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRG-WEDEKVRVV 637
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIK 443
+ EE++ + +++++IK
Sbjct: 638 AESFDNEELQT---AIRRLLEMDIK 659
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 126/307 (41%), Gaps = 48/307 (15%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
YL AF L + K G + Y ++ A+ + KM + PDV Y
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I+++GL ++ +V A+ LL +M +G PDT+ Y L+ C L EA L +
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-------- 352
C P+ Y+ ++ G C+ G A + ++M GCLP++V++ +L+ GLC
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 353 -------------------DQG---MFDVA----------------KKYMQLM--ISKGF 372
QG +FD+A K Y LM + G
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + LI GFC G ++ A + +E+ G P T+ ++ + E E
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582
Query: 433 VLNEIVK 439
+ ++VK
Sbjct: 583 IFEQMVK 589
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 40/248 (16%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ L GVLP+ ++YNI++ FC G+I+ A+ LF +M +G MPD +Y L+
Sbjct: 510 AYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLID 569
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK-------------------- 284
GL R + A+++ E M+ KG VP++ +Y T++ CR+
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGW 629
Query: 285 --------------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC---K 327
++L+ A + L M +K N D+ Y ++G + R +A
Sbjct: 630 EDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFS 689
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL+D N + V L+G LC D+A + +GF + + L+
Sbjct: 690 VLKDFKMNISSASCV---MLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLL 746
Query: 388 NVGKVDEA 395
++ + D+A
Sbjct: 747 HLDRKDDA 754
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M+ KG PD +YTTL
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G P++V+
Sbjct: 408 QRDGYKPSVVT 418
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWXGSKLLKEM 407
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWXGSKLLKEMQRDGYKP 414
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA + ++M G +
Sbjct: 179 NGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E++ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M+ KG PD +YTTL
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G P++V+
Sbjct: 408 QRDGYKPSVVT 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A M+ KG P+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E++
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + G++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A + ++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + N L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGN-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G AP
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYAP 414
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+E+ G P + T+ ++ C +E E ++K I+ D
Sbjct: 299 TDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL ++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G P++V+
Sbjct: 402 KLLKEMQRDGYAPSVVT 418
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + G P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++ +E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 21/392 (5%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P V +++ S D LA F +A + P F H+ ++ L+ L R K D+
Sbjct: 42 TPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLF- 100
Query: 120 TLKSEHYP-VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLV 176
+SE P + +Y I I N D AL+ M P I+ +
Sbjct: 101 --RSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMA 158
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ L A D +S G PN +Y ++ AF + A L +M ERG P++
Sbjct: 159 NAGD-LDGAMDHLRS---MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNL 214
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y +L+ LC+ S V A D+++ M+ GF P+ +++ +L++ C++ + +A KLL
Sbjct: 215 VTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 274
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M KG P++V Y+ ++ G C+ + ++A +VLE+M + G P+ +Y L+ GLC
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A++ ++ M G +P V ++I FC GK+ EA L+E+ K ++P T+
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394
Query: 417 IVPQICA----------GEEMEKLGEVLNEIV 438
++ +C E+M++ G+VL ++V
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 41/364 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI RAK +L ++ P P+L TY L+ + ++ A +
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCP--PNLVTYNVLVDALCKLSMVGAAQDVVK 238
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E P N +++ R + A L G+ PN +Y+ ++ C +
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFC-KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 297
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
A + +M RGV PD +Y L+ GLC+ ++ A +L M G PD + Y
Sbjct: 298 QKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 357
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA------------ 322
++++++ C+ KL EA K L M+ + +PD+V YNTV+ G C+ G+
Sbjct: 358 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417
Query: 323 ------------------------IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++A K+L+ M GC P++V+Y T++ GLC G +
Sbjct: 418 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 477
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A+ +Q M G +P+ LI G C KVDEA V+EE+ AG P+ T+ +V
Sbjct: 478 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 537
Query: 419 PQIC 422
+C
Sbjct: 538 NGLC 541
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPD 147
R + TY LI L +++ F ++L +K+ VTP FTY LI +++ +
Sbjct: 279 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG--VTPDAFTYSALIHGLCKADKIE 336
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A + R M C P + I+ L A + K P+ +YN +
Sbjct: 337 EAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE-AQKTLQEMRKQRKSPDVVTYNTV 395
Query: 208 MRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+ C G I+ A + +M E G V+PDV +Y ++ GLC+ + A LL+ M G
Sbjct: 396 IDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 455
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++YTT+++ LC+ +L EA LL MK GC P++V Y T++ G C+ + +A
Sbjct: 456 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 515
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS--KGFSPHFSVSHALIK 384
+V+E+M + GC PNLV+Y T+V GLC G A++ +Q M SP + ++
Sbjct: 516 RVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVN 575
Query: 385 GFCNVGKVDEACGVLEEL 402
+ V EA +LE++
Sbjct: 576 ALMSSDLVQEAEQLLEQM 593
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 145/306 (47%), Gaps = 39/306 (12%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +L++LV + + R A DLF+S P+ SYNI++ FC GD+ A L +M
Sbjct: 81 NSLLQVLVRCKKH-REAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK 139
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G PD ++ ++ + ++ A+D L M G P+ ++YT L+ + R KKL
Sbjct: 140 SAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLE 196
Query: 289 EAYKLLCRMKVKGCNPDIVHYN-----------------------------------TVV 313
EA KLL M+ +GC P++V YN ++V
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC+ G DA K+L M + G PN+V+Y L+ GLC F AK+ ++ M ++G +
Sbjct: 257 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVT 316
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P ALI G C K++EA +L + +G P + I+ C ++ + +
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376
Query: 434 LNEIVK 439
L E+ K
Sbjct: 377 LQEMRK 382
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 162/313 (51%), Gaps = 4/313 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY LI + A+ F M+ N KP N +++ ++
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK-MKEG 286
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F K G+ PN +Y +M +C +++ A ++ M +RGV PD++SY IL+ G
Sbjct: 287 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 346
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +V+ A++L ++M +K +PD ++Y +L++ LC+ K+ A KL+ M +G PD
Sbjct: 347 FCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 406
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I+ Y++++ C+ + A +L + G PN+ +Y L+ GLC G + A +
Sbjct: 407 IITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG++ + +I GFCN G DEA +L ++ P T+ +I+ + +
Sbjct: 467 DLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKD 526
Query: 426 EMEKLGEVLNEIV 438
E +K E L E++
Sbjct: 527 ENDK-AEKLREMI 538
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 134/258 (51%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ AFDL+ G+ PN +Y+ ++ F G + A LFNKM + PDV ++
Sbjct: 212 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFN 271
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ G C+ ++ + M+ +G P+ ++Y +L++ C K++ +A +L M +
Sbjct: 272 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G NPDI YN ++ GFC+ + +A + ++M +P++V+Y +L+ GLC G A
Sbjct: 332 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 391
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M +G P +++ C +VD+A +L +L G P+ T+ +++
Sbjct: 392 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 421 ICAGEEMEKLGEVLNEIV 438
+C G +E + +++
Sbjct: 452 LCKGGRLEDAHNIFEDLL 469
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 18/302 (5%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY--------------LRPAFDLFKSAHK 194
A F +L N P + N+IL LV ++Y + P F+ H+
Sbjct: 60 AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQ 119
Query: 195 -HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G PNT ++ +++ C G I A + + G D Y L+ GLC+ +
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+DLL + P+ + Y+T+++ +C+ K + +A+ L M KG +P++V Y+ ++
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GF G+ DA + M P++ ++ LV G C G K +M+ +G
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ +L+ G+C V +V++A +L + + G P ++ +++ C +++K+ E
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC---KIKKVDEA 356
Query: 434 LN 435
+N
Sbjct: 357 MN 358
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A DL + + V PN Y+ ++ C + ++ A+ L+++M +G+ P+V +Y L
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G Q+ A+DL M+ + PD ++ L++ C+ K++E + M +G
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V Y +++ G+C A +L M G P++ SY L+ G C D A
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M K P ++LI G C +GK+ A +++E+ G P T+ I+ +C
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418
Query: 423 AGEEMEKLGEVLNEI 437
+++K +L ++
Sbjct: 419 KNHQVDKAIALLTKL 433
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 26/296 (8%)
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+PK+ + L TH N++ S+ K +P Y+ + F N D+ A++L
Sbjct: 14 VPKKFHSFQFLKNTHFNFIP------YSSSKINFIP----YSSISTTFHNNNDVVDAFSL 63
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM----LN------------KGF 267
F+++ + P + ++ L + + + L + M +N G+
Sbjct: 64 FSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGY 123
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+T+++TTL+ LC K ++ +A + G D V Y T++ G C+ G A
Sbjct: 124 HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALD 183
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L + N PN+V Y T++ G+C + A M+SKG SP+ ALI GF
Sbjct: 184 LLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 243
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
VG++ +A + +++ P T+ ++V C +M++ V ++K IK
Sbjct: 244 TVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 173/343 (50%), Gaps = 3/343 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
L F +AS+QP +RHS Y +I LG+ + F + ++ ++ E+ Y +TP +F
Sbjct: 123 LGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIV 182
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A + +A++ M ++ C+P +L+ L + + ++ A LF+
Sbjct: 183 LMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGS-VKEAASLFEDMRVR 241
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
PN + + ++ +C G I A + ++ E G PD+ Y L+ G + ++ A
Sbjct: 242 -FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDA 300
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL +M P+ S+T L+ S C+ +K+ EA ++ M+ GC D+V Y T++ G
Sbjct: 301 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 360
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G A ++L+DM G P+ +SY ++ + + + ++ M G P
Sbjct: 361 FCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 420
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ + +I+ C +G + EA + E+ G P DT++++V
Sbjct: 421 LNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMV 463
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++MR F + A + ++M + G PD + L+ LC+ V A L EDM +
Sbjct: 182 VLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR 241
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
F P+ +T+LL CR+ K+ EA +L ++K G PDIV YN ++ G+ + G+ DA
Sbjct: 242 -FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDA 300
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+L +M C PN S+ L+ C D A + M G LI G
Sbjct: 301 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 360
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
FC G D+A +L+++++ G P + +++ I+ EE+E+ E++ E+ K+ D
Sbjct: 361 FCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 420
Query: 446 TRIVEAGIGL 455
I I L
Sbjct: 421 LNIYNTMIRL 430
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 2/239 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R AFDL K PN S+ I++++FC + A +F +M G DV +Y
Sbjct: 297 MRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTT 356
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ ++A ++L+DM+ KG P LSY ++ + +K++L E +L+ M+ G
Sbjct: 357 LISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIG 416
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD+ YNT++ C+ G +A ++ +M + G P L +Y +V G QG A
Sbjct: 417 CVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEAC 476
Query: 362 KYMQLMISKGF--SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
Y + M+ +G +P + L K++ A + + G + W + +
Sbjct: 477 DYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWI 535
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 16/365 (4%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
PN RH S L+ R +L+ +K + ++ L+ YA++
Sbjct: 244 PNLRHFTS----LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRD 299
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A M + NC P +++ + A +F G + +Y ++
Sbjct: 300 AFDLLAEMKKVNCGPNAASFTILIQSFCKTEK-MDEAMRIFTEMQGSGCEADVVTYTTLI 358
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G+ AY + + M ++G P SY +M +K ++ ++L+E+M G V
Sbjct: 359 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCV 418
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD Y T++ +C+ L+EA +L M+ G NP + Y +V GF +G ++AC
Sbjct: 419 PDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDY 478
Query: 329 LEDMPSNGCL--PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++M G L P + + L L ++AK M +KG + S I
Sbjct: 479 FKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHAL 538
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ G V EAC +++ A P DT+ + M L ++ + + VEI
Sbjct: 539 FSNGHVKEACSYCLDMMDADLMPQPDTFAKL---------MRGLKKLFHRQLAVEITEKV 589
Query: 447 RIVEA 451
R + A
Sbjct: 590 RKMAA 594
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQVSGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M++ G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 170/356 (47%), Gaps = 11/356 (3%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
I++ + G+ ++ IL T ++ + +F+ LI Y ES A++ +R E
Sbjct: 38 IVVSRKGKGSASAVFAAILETKGTQRSDI--YVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ ++LE L+ + Y + + ++ + + G + +NI+M +F G+I +
Sbjct: 96 KFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A ++F+ + + + P V S+ LM G + ++ L M G PD +Y+ L+N
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLIN 214
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC++ K+ +A L M KG P+ V + T++ G C+ GR A ++ + M S P
Sbjct: 215 GLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L++Y TL+ GLC +G A+ + MI KG P LI G C G ++ A
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 400 EELLKAGEAPHEDTWVMIVPQICA------GEEMEKLGEVLNEIVKVEIKGDTRIV 449
+ ++K + + ++ +C E+M L E+LN +K EI T I+
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM--LREMLNVGLKPEIGTYTMII 388
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M+ KG PD ++YTTL
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G +P++V+
Sbjct: 408 QRDGYMPSVVT 418
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 176/371 (47%), Gaps = 1/371 (0%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
+ + S+ A +F SN + +L+ + YFS ++ +
Sbjct: 127 QFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNL 186
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ YL + NL A + +L+ P + N ++ L + A
Sbjct: 187 QIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK-INEAQ 245
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF K G+ P S+N ++ +C +G++ + L M E V PDV +Y +L+ GL
Sbjct: 246 LLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGL 305
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ Q++ A L +M ++G VP+ +++TTL+N C + ++ +M KG PD+
Sbjct: 306 CKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDV 365
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNT++ G C+ G +A K++ +M G P+ +Y L+ G C +G + A + +
Sbjct: 366 ITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKE 425
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ +G ALI GFC G+V EA L E+L+AG P + T+ M++ C +
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD 485
Query: 427 MEKLGEVLNEI 437
++ ++L E+
Sbjct: 486 VKTGFKLLKEM 496
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 155/319 (48%), Gaps = 11/319 (3%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ-----LNRILELLVTHRNYLRPAF 186
+F+ L+ Y +S A++ FR + + N + +P +R+++L N PA+
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQ-IPFHSCGYLFDRLMKL-----NLTSPAW 210
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ G P+ +N++M C I+ A LF ++ +RG+ P V S+ L+ G
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +++ L M+ PD +Y+ L+N LC++ +L +A KL M +G P+
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V + T++ G C GRA ++ + M G P++++Y TL+ GLC G AKK +
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M +G P LI G C G ++ A + +E++K G + ++ C +
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 427 MEKLGEVLNEIVKVEIKGD 445
+ + L E+++ IK D
Sbjct: 451 VIEAERTLREMLEAGIKPD 469
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 1/304 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI Y +S D+ + R M+E P + ++ L L A LF
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCK-EGQLDDANKLFLEM 321
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G++PN ++ ++ C G + ++ +M +GV PDV +Y L+ GLC+ +
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L+ +M +G PD +YT L++ C++ L A ++ M +G D V + +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFCREG+ I+A + L +M G P+ +Y ++ G C +G K ++ M G
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + L+ G C G++ A +L+ +L G P + T+ +++ C E +
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDK 561
Query: 433 VLNE 436
+ +E
Sbjct: 562 LQSE 565
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + A +T R MLE KP ++ + ++ F L K
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK-KGDVKTGFKLLKEM 496
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G +P +YN+++ C G + A L + M GV+PD +Y IL++G C+
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG-- 554
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSL---CRKKKLR 288
NR D + KG V D SYT+L+ L C++++ R
Sbjct: 555 NRE-DFDKLQSEKGLVQDYGSYTSLIGDLRKTCKERQKR 592
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 1/357 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L AK + + +++ + P F LI + L +R + M
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E C P + I++ + +L A ++ +G+ PN YN +++ C
Sbjct: 289 VEHGCTPDIRMYATIIDG-ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
L +MF++ D ++ IL+ C+ V+R ++LLE ML +G +PD ++YTT
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTT 407
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N C++ + EA LL M GC P+ + Y V+ G C R +DA ++ M G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C N +++ TL+ LC +G+ + A + ++ M+ G SP +I G GK DEA
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+L ++ G +P+ + I + + K+ ++ + I I+ D + A I
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 40/351 (11%)
Query: 127 PVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
PV P+ +TY + + A + D AL M C P+P + ILE + R
Sbjct: 117 PVPPNAYTYFPVVRALCARGRIAD-ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGF-R 174
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + + H G + + N+++ A C G + A L + G PDV SY ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 234
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC + +L+E+M+ P+ +++ TL++ LCR +++L +M GC
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 294
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------ 351
PDI Y T++ G C+EG A ++L MPS G PN+V Y TL+ GL
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 352 -----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
C G+ D + ++ M+ +G P +I GFC
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCK 414
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E ++++++++
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y L+ L A+ + +++L + + P+ F
Sbjct: 315 VAHEILN---RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ MLE C P ++ + A L KS
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGF-CKEGLIDEAVMLLKSMTA 430
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C A L ++M ++G + ++ L+ LC+K V +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC +G + A +++ M+S G P
Sbjct: 551 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LI+G + G V EA +L EL G
Sbjct: 611 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 3/234 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YN M+ +C G + A L + V P+ +Y +++ LC + ++ A+ +L++M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+G P Y +L + CR R A ++L + +GC D+ + N V+ C +G
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A +L D+PS GC P++VSY ++ GLC + ++ M+ M+ P+ + LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C G + VL ++++ G P + I+ IC +E E+LN +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY +I + + L D A+ +SM CKP +L+ L + ++ A D
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD-AED 458
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G N ++N ++ C G + A L +M G PD+ SY ++ GL
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 518
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+ + + A++LL M+NKG P+T+ Y+++
Sbjct: 519 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAV 578
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++SLC++ + A + L M GC P+ Y ++ G EG +A ++L ++
Sbjct: 579 LYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638
Query: 333 PSNGCL 338
S G L
Sbjct: 639 CSKGAL 644
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G CR Q+ A L + P+ +Y ++ +LC + ++ +A +L M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+GC P Y+ ++ CR G A +VLED+ + GC ++ + ++ +CDQG D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++ + S G P +A++KG C + ++EE+++ P+ T+ ++
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C E++ EVL ++V+ D R+
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRM 299
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
++ ++ + +PD AL FR + C P + N +L+ V R Y D F ++
Sbjct: 130 VLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEA--DAFFASLS 187
Query: 195 HG-----VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
HG + PN ++YNI++R+ C GD+ A +LF+ + RGV PD +Y LM GL +
Sbjct: 188 HGACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKH 247
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVH 308
Q++ A+DLL++M + G D + Y LL+ + +A K+ ++ + G +P++
Sbjct: 248 DQLDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLAT 307
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y ++ G C+ GR +A +V M +N P+ V+Y L+ GLC G D A + M+
Sbjct: 308 YKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMV 367
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEA 395
G +V ++LIKGFC VG+ EA
Sbjct: 368 KAGLVLDVAVYNSLIKGFCKVGRTGEA 394
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRA----VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
G P + S+ L+ R + + A L + P+ +Y +L SLC +
Sbjct: 155 GCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARGD 214
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ A L ++ +G PD V Y+T++ G + + +A +L++MP G + V Y
Sbjct: 215 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMPDYGVQADAVCYNA 274
Query: 347 LVGGLCDQGMFDVA-KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
L+ G GMF+ A K + QL+ G SP+ + ++ G C +G+ EA V ++
Sbjct: 275 LLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVAN 334
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
P T+ +++ +C +++ V +++VK + D +
Sbjct: 335 NHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAV 377
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH--YPVTPSLFTY---LIKIYAE 142
P R N+ L+ RA+ +S D +L + P+L TY L + A
Sbjct: 157 NPGIRSHNA----LLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCAR 212
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
++ DRA+ F S+ P + ++ LV H + L A DL +GV +
Sbjct: 213 GDV-DRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKH-DQLDNALDLLDEMPDYGVQADAV 270
Query: 203 SYNIMMRAFCF-NGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
YN ++ CF G A ++ ++ + G P++ +Y++++ GLC+ + A ++
Sbjct: 271 CYNALLSG-CFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWS 329
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M+ PDT++Y L++ LCR + A ++ M G D+ YN+++ GFC+ G
Sbjct: 330 RMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVG 389
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
R +A K + +G + + +Y ++ GL D G
Sbjct: 390 RTGEAWKFWDSTGFSG-IRQITTYNVMMKGLLDSG 423
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 199/432 (46%), Gaps = 23/432 (5%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQK-LIASQSDPLLAKEIFDYASRQPNF 91
+ + ES S QQ +S+S +P V K L+ + DP A + F A + F
Sbjct: 68 FDDIASESMRSFLQQDGPHLSDSAL---APIWVSKALVKLKGDPKSALKFFKEAGARAGF 124
Query: 92 RHSNSTYLILILKLGRAKYF----SLID------------DILITLKSEHYPVTP--SLF 133
RH+ +Y +L L ++ S+I D L S P +F
Sbjct: 125 RHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVF 184
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
L + + + + A + F M +F P + N +L L + + A FK
Sbjct: 185 DTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRL-SKSSKGGLALSFFKDMV 243
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G+ P+ +YN+++ GD+ A +LF +M +G+ PD+ +Y L+ G + +
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
AV + E+M + G PD ++Y +L+N C+ +++ +A++ L MK +G P++V Y+T++
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
FC+ G ++A K DM G PN +Y +L+ C G + A K M G +
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ AL+ G C G++ EA + LLKAG ++ + + + MEK ++
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483
Query: 434 LNEIVKVEIKGD 445
L E+ K +K D
Sbjct: 484 LEEMNKKNLKPD 495
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY LI + ++ + A K F M+ +P +++ + L A
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD-LNEA 410
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L + GV N +Y ++ C +G + A LF + + G + + Y L G
Sbjct: 411 FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + +A+D+LE+M K PD L Y T + LCR+ ++ ++ ++ M G +
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTAN 530
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y T++ + + G+ +A +L++M G +V+Y L+ GLC G+ A +Y
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M G P+ + ALI G C ++EA + E+L G +P + + ++
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 139/353 (39%), Gaps = 38/353 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI Y + + A+ F M + C+P N ++ + AF+
Sbjct: 284 PDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER-IPQAFE 342
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G+ PN +Y+ ++ AFC G + A F M G+ P+ +Y L+ C
Sbjct: 343 YLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANC 402
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL-------------- 293
+ +N A L +M G + ++YT LL+ LC ++REA +L
Sbjct: 403 KIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQ 462
Query: 294 ---------------------LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
L M K PD++ Y T + G CR+ D+ V+ +M
Sbjct: 463 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G N Y TL+ G A +Q M G LI G C +G V
Sbjct: 523 MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLV 582
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+A + + + G P+ + ++ +C + +E+ + NE++ I D
Sbjct: 583 QQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 3/293 (1%)
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP-LPKQLNRILE 173
+++ L + + ++T L Y ++ + ++A+ M + N KP L +I
Sbjct: 446 EELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWG 505
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
L +N + + + + G+ N+ Y ++ A+ G + A L +M + G+
Sbjct: 506 L--CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIK 563
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
V +Y +L+ GLC+ V +AV + M G P+ + YT L++ LC+ L EA L
Sbjct: 564 ITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNL 623
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M KG +PD + Y +++ G + G +A + M G +L +Y +L+ G
Sbjct: 624 FNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSR 683
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G +AK + M+ KG P + L++ + +G ++EA + +++ + G
Sbjct: 684 YGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +LF + K G N + Y + + + A + +M ++ + PD+ Y
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ GLCR++++ ++ ++ +M++ G ++ YTTL+++ + K EA LL M+ G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+V Y ++ G C+ G A + + M NG PN++ Y L+ GLC + AK
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M+ KG SP V +LI G G EA + +++ G
Sbjct: 622 NLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 6/252 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A D+ + +K + P+ Y + C +I + + +M + G+ + Y
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ + + AV+LL++M + G ++Y L++ LC+ +++A + M G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+I+ Y ++ G C+ +A + +M G P+ + Y +L+ G G A
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL 656
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ G +LI GF G+V A +L+E+L+ G P + V I
Sbjct: 657 SLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQ------VLCI 710
Query: 422 CAGEEMEKLGEV 433
C + +LG++
Sbjct: 711 CLLRKYYELGDI 722
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI Y + A+ + M + K +++ L ++ A F
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC-KIGLVQQAVRYFDH 591
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
++G+ PN Y ++ C N + A LFN+M ++G+ PD Y L+ G +
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ L M+ G D +YT+L+ R +++ A LL M KG PD V
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCIC 711
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
++ + G +A + +DM G + +
Sbjct: 712 LLRKYYELGDINEALALHDDMARRGLISGTI 742
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI +++ + A F ML+ P +++ + H N A L
Sbjct: 603 IYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP-GEALSLRNR 661
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ + +Y ++ F G + +A +L ++M +G++PD L++
Sbjct: 662 MVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGD 721
Query: 252 VNRAVDLLEDMLNKGF--------VPDTLSYTTLLNSLCRKK 285
+N A+ L +DM +G VP L+ T L+ LC +
Sbjct: 722 INEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 6/360 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY ++I + R + L L S + P T S T L + A D + F
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED-VEELFAE 306
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+E NC P + ++ + A + + HG NT NI++ C G
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFC-RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 365
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A+ N M G PD SY +++GLCR + A +LL++M+ K P+ +++
Sbjct: 366 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T + LC+K + +A L+ +M GC +IV YN +V GFC +GR A ++ MP
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 483
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C PN ++Y TL+ GLC+ D A + + M+ K +P+ + L+ FC G +DEA
Sbjct: 484 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
++E++++ G P+ T+ ++ I E+ E+L+ +V + D + IG+
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 14/338 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
++G A SL+DD+L H PS+ TY L++ +S +A++ M C
Sbjct: 191 RVGEA--LSLLDDML------HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N I+ + + A + +G P+T SY +++ C
Sbjct: 243 TPNIVTYNVIINGMC-REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 301
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
LF +M E+ MP+ ++ +L++ CR V RA+ +LE M G +T ++N++
Sbjct: 302 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ ++ +A++ L M GC+PD + Y TV+ G CR R DA ++L++M C PN
Sbjct: 362 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V++ T + LC +G+ + A ++ M G + +AL+ GFC G+VD A LE
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LEL 478
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P+ T+ ++ +C E ++ E+L E+++
Sbjct: 479 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 11/304 (3%)
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ L DRA + + C L + L R R A + ++A + G +
Sbjct: 94 ARLVDRATSRGEAPDVYLCTKLIRNLCR--------RGRTSDAARVLRAAERSGTAVDVF 145
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ +C G + A L M V PD +Y +++GLC + +V A+ LL+DM
Sbjct: 146 AYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G P ++YT LL ++C+ +A ++L M+ KGC P+IV YN ++ G CREGR
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 262
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA + L + S G P+ VSY T++ GLC ++ ++ M+ K P+ L
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
++ FC G V+ A VLE++ G A + +++ IC ++ + LN +
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 382
Query: 443 KGDT 446
DT
Sbjct: 383 SPDT 386
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 130/243 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y ++R C G + A +L + M RG P V +Y +L++ +C+ + +A+
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
++L++M KG P+ ++Y ++N +CR+ ++ +A + L R+ G PD V Y TV+ G
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D ++ +M C+PN V++ LV C GM + A + ++ M G + +
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
++ + +I C G+VD+A L + G +P ++ ++ +C E E E+L E
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411
Query: 437 IVK 439
+V+
Sbjct: 412 MVR 414
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 126/244 (51%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A L G P+ +Y +++ A C + A + ++M +G P++ +
Sbjct: 189 RGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVT 248
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y +++ G+CR+ +V+ A + L + + GF PDT+SYTT+L LC K+ + +L M
Sbjct: 249 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 308
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
K C P+ V ++ +V FCR G A +VLE M +GC N ++ +C QG D
Sbjct: 309 EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 368
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A +++ M S G SP ++KG C + ++A +L+E+++ P+E T+ +
Sbjct: 369 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 428
Query: 419 PQIC 422
+C
Sbjct: 429 CILC 432
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 163/339 (48%), Gaps = 13/339 (3%)
Query: 102 ILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
I K GR +DD L + Y +P +Y ++K + + A + + M+
Sbjct: 361 ICKQGR------VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
NC P N + +L + + A L + +HG N +YN ++ FC G +
Sbjct: 415 KNCPPNEVTFNTFICILC-QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 473
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A LF M P+ +Y L+ GLC +++ A +LL +ML K P+ +++ L+
Sbjct: 474 SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 530
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ C+K + EA +L+ +M GC P+++ YNT++ G ++ + +A ++L + SNG
Sbjct: 531 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 590
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++G L + + A K ++ G P + + ++ C D A
Sbjct: 591 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 650
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G P+E T++ ++ + + +++ ++L E+
Sbjct: 651 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L ++ RG PDV L++ LCR+ + + A +L G D +Y TL+
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR +L A +L+ M V PD Y ++ G C GR +A +L+DM GC P
Sbjct: 153 GYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y L+ +C F A + + M +KG +P+ + +I G C G+VD+A L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
L G P ++ ++ +CA + E + E+ E+++
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 4/310 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA+ + ++L + ++ P F I I + L ++A M
Sbjct: 388 SYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 447
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C+ N ++ + A +LF S PNT +Y ++ C
Sbjct: 448 SEHGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 503
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M ++ P+V ++ +L+ C+K ++ A++L+E M+ G P+ ++Y T
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL+ + + EA +LL + G +PDIV Y++++ RE R +A K+ + G
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 623
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P V Y ++ LC + D A + M+S G P+ LI+G N + E
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 683
Query: 397 GVLEELLKAG 406
+L EL G
Sbjct: 684 DLLRELCSRG 693
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 127 PVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P P+ TY + N D A + ML+ +C P N +L + +
Sbjct: 483 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN-VLVSFFCQKGLMDE 541
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + +HG PN +YN ++ + + A L + + GV PD+ +Y ++
Sbjct: 542 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 601
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L R+ +V A+ + + + G P + Y +L +LC++ A M GC P
Sbjct: 602 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 661
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ + Y T++ G E + +L ++ S G L
Sbjct: 662 NELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 84/229 (36%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F +PN TY L+ L A+ ++L + + F L+
Sbjct: 475 ALELFYSMPCKPN----TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 530
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP-----------LPKQLN--RILELL--------- 175
+ + L D A++ M+E C P + K N LELL
Sbjct: 531 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 590
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + + A +F G+ P YN ++ A C + A
Sbjct: 591 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 650
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
F M G MP+ +Y L++GL + + DLL ++ ++G + L
Sbjct: 651 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 699
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 173/384 (45%), Gaps = 42/384 (10%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H + ++ +L RA+ F L+ +L L S P+ P++F +I ++ PD A+
Sbjct: 58 HDHPFAACVLYRLARARLFPLVPPLLAALHSRGAPLRPTVFAAVIDHLGAASRPDAAVGV 117
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
FR++ F C + +L LV++ A D+ A K GV N SYNI+++ C
Sbjct: 118 FRTVPAF-CSHSAATFHSLLNALVSN-GRTDAARDMLPLAPKLGVRLNAVSYNIILKGAC 175
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
A + ++M RGV P V ++ L+ CR+ ++ A L+++M +G P+
Sbjct: 176 LRDGFMGARGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAA 235
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH------------------------ 308
+Y L+ LC + +A KL+ M+ +GC D+V+
Sbjct: 236 TYALLMRGLCDADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAM 295
Query: 309 -----------YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
YN ++ C GRA +A + L +M G +P +YR LV G C F
Sbjct: 296 RKRKLKPDDASYNILIRCLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDF 355
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+ + M++ G P L +G GK +EA VLE++ + + D W +
Sbjct: 356 DLGLRVFNAMMASGHCPQARTFRHLARGLGEDGKAEEAFFVLEQMARREMSLDADGWQAV 415
Query: 418 VPQI---CAGEEMEKLGEVLNEIV 438
V + C+ + E +++NE+V
Sbjct: 416 VTCVRSSCSTQASEI--KLVNELV 437
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 148/292 (50%), Gaps = 1/292 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+ F S L+FN P N +++ L RNY AF +++ VLP+ S + +
Sbjct: 57 EAVSLFHSALDFNLLPSWATCNFLVDALARSRNY-GLAFSVYRRMTHVDVLPSFGSLSAL 115
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ F + + + + +RG +V I+++GLCR V A+ L+ +M K
Sbjct: 116 IECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSV 175
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +SY TL+N LC+ KKL+EA LL M+ GC P+ V T++ G C++GR +A +
Sbjct: 176 SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 235
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+LE M G ++V Y TL+ G C+ G D K+ M+ KG S + L+ G C
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+G+ EA VL + + G P T+ ++ +C ++LN +V+
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVE 347
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 7/301 (2%)
Query: 126 YPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS T +L+ A S A +R M + P L+ ++E + +
Sbjct: 68 FNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQ---K 124
Query: 184 P--AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
P F + K G N NI+++ C NG + A L +M + V PD+ SY
Sbjct: 125 PQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNT 184
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ AV LL +M G P++++ TTL++ LC+ ++ EA +LL MK KG
Sbjct: 185 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D+V Y T++ GFC G ++ ++M G N+V+Y LV GLC G + A
Sbjct: 245 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 304
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M G P LI G C G+ A +L +++ GE P T+ +++ +
Sbjct: 305 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 364
Query: 422 C 422
C
Sbjct: 365 C 365
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 2/260 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A L G PN+ + +M C +G + A L M ++G DV Y
Sbjct: 195 LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C ++R +L ++ML KG + ++Y+ L++ LCR + +EA +L M G
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD+V Y ++ G C++GRA A +L M G P+ V+Y L+ GLC +G+ A
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA--PHEDTWVMIVP 419
K +++MI KG + L+KG C+ GKVDEA + + P+ T+ M++
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+C + K ++ ++VK
Sbjct: 435 GLCKEGRLTKAVKIHRKMVK 454
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 170/348 (48%), Gaps = 6/348 (1%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K GRA + + ++++ E VT + L+ + L A K R M+E K
Sbjct: 331 KDGRATHAMDLLNLMVEKGEEPSNVT---YNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 387
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSA--HKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
N +++ L + + A LF S +++ + PN ++N+++ C G ++ A
Sbjct: 388 DVVTYNTLMKGLC-DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 446
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ KM ++G ++ +Y +L+ G + ++ A++L + +L+ GFVP++ +Y+ L++
Sbjct: 447 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + L A L C M+ G NP + YNT++ C+EG A + ++M + C P++
Sbjct: 507 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 566
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+S+ T++ G G F K+ M+ G P LI +G++DEA LE
Sbjct: 567 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALER 626
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
++ +G P + ++ + + + ++ +L+++ D +IV
Sbjct: 627 MVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 674
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF SA +LP+ + N ++ A + + +A++++ +M V+P S L++
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIE 117
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ ++ +L +GF + +L LCR + EA L+ M K +P
Sbjct: 118 CFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSP 177
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV YNT++ G C+ + +A +L +M + GC PN V+ TL+ GLC G D A + +
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M KGF + LI GFCN G +D + +E+L G + + T+ +V +C
Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 297
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
+ ++ VLN + + I D
Sbjct: 298 GQWKEANTVLNAMAEHGIHPDV 319
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 171/379 (45%), Gaps = 10/379 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
KE+FD + + TY L+ L R + + +L + +EH + P + TY
Sbjct: 268 GKELFDEMLGK-GISANVVTYSCLVHGLCRLGQWKEANTVLNAM-AEH-GIHPDVVTYTG 324
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI + A+ M+E +P N +L L + AF + + +
Sbjct: 325 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC-KEGLVIDAFKILRMMIEK 383
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF--ERGVMPDVESYRILMQGLCRKSQVN 253
G + +YN +M+ C G + A LFN MF E + P+V ++ +L+ GLC++ ++
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 443
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+AV + M+ KG + ++Y LL + K++EA +L ++ G P+ Y+ ++
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503
Query: 314 LGFCREGRAIDACKVLE-DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
GFC+ R ++ K L +M ++G P L Y TL+ LC +G + AK Q M +
Sbjct: 504 DGFCKM-RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + +I G G + ++++ G P T+ ++ ++ E+++
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622
Query: 433 VLNEIVKVEIKGDTRIVEA 451
L +V D + ++
Sbjct: 623 ALERMVASGFTPDALVYDS 641
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF HG+ P YN +M + C G + A +LF +M PD+ S+
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G + +L M+ G PD L+++TL+N L + +L EA L RM G
Sbjct: 572 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
PD + Y++++ G +G + +L M + G + + T++ LC
Sbjct: 632 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 6/208 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+ FTY LI + + + + A F M P N ++ L + L A
Sbjct: 493 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS-LEQAK 551
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF+ P+ S+N M+ GD L KM E G+ PD ++ L+ L
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ +++ A LE M+ GF PD L Y +LL L K E LL +M KG D
Sbjct: 612 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDR 671
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPS 334
+T++ C + +D V+E +P+
Sbjct: 672 KIVSTILTCLCHSIQEVD---VMELLPT 696
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +F + K G+ P S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L +ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ V+Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ +++ E+
Sbjct: 392 CKKGDVWTGSKLMKEM 407
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LFN+M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD V Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +++E+ + G P
Sbjct: 391 FCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 1/312 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E + ++LE L+ + Y + + ++
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK-YFKLVWGFYED 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + G + +NI+M FC G+I +A ++F+ + + G+ P S+ LM G R
Sbjct: 127 SLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ A +L M G P+ V + T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + ++K + + ++ +C
Sbjct: 307 LKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 432 EVLNEIVKVEIK 443
++L E++ V +K
Sbjct: 367 KMLREMLSVGLK 378
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + E G + + ILM C++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N R L E ++L M+ G PD+ Y+ ++ G C+E + A ++ +M NG +
Sbjct: 179 NGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 35/194 (18%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+
Sbjct: 225 ANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL--------------------------- 277
GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRL 344
Query: 278 --------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
++ LC++ + +A K+L M G P+I Y ++ FC++G K++
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404
Query: 330 EDMPSNGCLPNLVS 343
++M +G +P++V+
Sbjct: 405 KEMQRDGYVPSVVT 418
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
ED L G+ + L++ C++ +++ A + + G P V +NT++ G+ R
Sbjct: 125 EDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|449445756|ref|XP_004140638.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Cucumis sativus]
gi|449526108|ref|XP_004170056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g05600-like [Cucumis sativus]
Length = 497
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 15/415 (3%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYAS-RQPNFRHSNSTYLILILKLGRAKYFSLIDDI 117
I +P + ++I Q++P A ++F A R P++RH+ Y +I LG + S + ++
Sbjct: 8 ILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGRVSEMREV 67
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
+ ++ + S+F++ IK YA L + + F+S FNC + N +LE+L+
Sbjct: 68 MDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEILLK 127
Query: 178 HRNYLRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
L A LF+ ++ GV T+S N++M++ C G +A +F +M + P+
Sbjct: 128 ESQ-LHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNR 186
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDML----NKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
SY I+M+GLC+ ++N A+ LL M KG D + Y TLL +LC ++ +A +
Sbjct: 187 LSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEQAVE 246
Query: 293 LLCRMKVKGCN-PDIVHYNTVVLGFCREGR-AIDACK-VLEDMPSNGCLPNLVSYRTLVG 349
+L ++ KG P HY + L CR I+ K ++ + G +P+ SY +
Sbjct: 247 ILGKILRKGLKAPKRAHYR-IDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMAV 305
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
L ++ D K + MI+KGF P + A C GKVD+A V+EE + G P
Sbjct: 306 DLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCVP 365
Query: 410 HEDTWVMIVPQIC----AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLI 460
+ +++ +C + ME L ++ ++ V K + G+ LE+ I
Sbjct: 366 TIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 120/222 (54%), Gaps = 6/222 (2%)
Query: 212 CFNGDISIA--YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C N +++I +L N+ +G +P +SY + L +++ ++ ++ M+ KGF P
Sbjct: 271 CRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRP 330
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+L Y SLC++ K+ +A K++ V GC P I YN V+ G C +G++ A + L
Sbjct: 331 PSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYL 390
Query: 330 EDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M G + N +Y TLV GLC + + A K ++ M+ K F P + + LIKG C+
Sbjct: 391 KKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCS 450
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC---AGEEM 427
VGK EA LEE++ G+ PH W +V +C AG +M
Sbjct: 451 VGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSLCCDVAGIDM 492
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
SLI++ LI P + S + +Y E N D+ K M+ +P P +
Sbjct: 283 SLINEALI---KGGIPSSDSYCAMAVDLYNE-NKTDQGDKVVSHMIAKGFRP-PSLIYEA 337
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER- 230
+ + A + + G +P YNI+++ C +G ++A KM ++
Sbjct: 338 KAASLCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQV 397
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G++ + E+Y L+ GLC +++ A +LE+M+ K F P + ++ TL+ LC K EA
Sbjct: 398 GLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEA 457
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
L M +G P + +N++V C + ID C
Sbjct: 458 VMWLEEMISQGQLPHVCVWNSLVSSLCCDVAGIDMC 493
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 141/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG +P+ +++TTL+ C+ ++ A ++ M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+ + MI ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 KHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + +YF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A K + M + V+Y
Sbjct: 296 GDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 NGHVP 420
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ M + ++PD+ +Y L+
Sbjct: 230 DANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A L+++M KG PD +YTTL++ C++ L A+K RM
Sbjct: 290 YGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P++ +Y ++ C +G K
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRNGHVPSVVTYNVLMNG 431
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ YN ++ C NG++ A L M + GV PD Y ++ G C+ V+ A
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L ++M K VPD ++YT++++ +C+ K+ EA ++ M VKG PD V Y ++ G
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+C+ G +A V M G PN+V+Y L GLC G DVA + + M KG P+
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ ++ G C +G +++ ++EE+ AG P T+ ++ C EM K E+L
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 171/334 (51%), Gaps = 1/334 (0%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+ +K F L ++LI + + P +F ++ E+ A K F +L +
Sbjct: 146 KIDVSKSFHLFTEMLIYTYKD-WGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVV 204
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N L L + ++ A +F+ + GV NT S NI++ C G + A+ L
Sbjct: 205 SVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNL 264
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
+M +RG PDV SY +++ G CR ++++ + L++++ KG PD Y ++ LC+
Sbjct: 265 LVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCK 324
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ EA +LL M+ G PD V Y TV+ GFC+ G ACK+ ++M +P++V+
Sbjct: 325 NGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVT 384
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y +++ G+C G A++ M+ KG P ALI G+C G++ EA V +++
Sbjct: 385 YTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV 444
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ G P+ T+ + +C E++ E+L+E+
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 149/293 (50%), Gaps = 4/293 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+ LK + KP N I+ LL+ + A L + K GV P+ Y
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNII-LLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC G++S A LF++M + ++PD+ +Y ++ G+C+ ++ A ++ +ML KG
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++YT L++ C+ +++EA+ + +M KG P++V Y + G C+ G A
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++L +M G PN+ +Y T+V GLC G + K M+ M GF P L+ +
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG---EEMEKLGEVLNE 436
C +G++ +A +L +L P T+ +++ C E+ E+L E + E
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 129/249 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + ++P+ +Y ++ C +G + A +FN+M +G+ PD +Y L+
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++ A + M+ KG P+ ++YT L + LC+ ++ A +LL M KG P
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ YNT+V G C+ G K++E+M G P+ ++Y TL+ C G A + +
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
++M++K P + L+ GFC G +++ ++E +L+ G P+ T+ ++ Q C
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 425 EEMEKLGEV 433
M E+
Sbjct: 606 NNMRATTEI 614
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 136/255 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++F G+ P+ +Y ++ +C G++ A+++ N+M ++G+ P+V +Y L
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +++ A +LL +M KG P+ +Y T++N LC+ + + KL+ M + G P
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + Y T++ +C+ G A ++L M + P LV++ L+ G C GM + ++ +
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG P+ + ++L+K +C + + + + G P +T+ +++ C
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640
Query: 425 EEMEKLGEVLNEIVK 439
M++ + E+V+
Sbjct: 641 RNMKEAWFLHKEMVE 655
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 123/225 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ AF + + G+ PN +Y + C NG+I +A L ++M +G+ P+V +Y
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC+ + + V L+E+M GF PDT++YTTL+++ C+ ++ +A++LL M K
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P +V +N ++ GFC G D +++E M G +PN ++ +L+ C +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ + M +G P + + LIKG C + EA + +E+++ G
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 150/316 (47%), Gaps = 8/316 (2%)
Query: 148 RALKTFRSMLEFNCKPL---PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++ F ML + K P + ++LV + ++ A LF ++GV+ + S
Sbjct: 151 KSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVEN-GFVLEAQKLFHKLLRYGVVVSVDSC 209
Query: 205 NIMM-RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
N+ + R C I IA +F + E GV + S I++ LC+ +V A +LL M
Sbjct: 210 NLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMT 269
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
++G PD +SY +++ CR +L + KL+ +K KG PD YN ++L C+ G +
Sbjct: 270 DRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVV 329
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A ++L M G P+ V Y T++ G C G A K M K P ++I
Sbjct: 330 EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI 389
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G C GK+ EA + E+L G P E T+ ++ C EM++ V N++V+ K
Sbjct: 390 HGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ---K 446
Query: 444 GDTRIVEAGIGLEDYL 459
G T V L D L
Sbjct: 447 GLTPNVVTYTALADGL 462
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+T +Y +M A+C G+++ A+ L M + + P + ++ +LM G C +
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG 576
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L+E ML KG +P+ ++ +L+ C K +R ++ M +G PD YN ++ G
Sbjct: 577 ERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
C+ +A + ++M G +Y L+ G + F A+K + M G
Sbjct: 637 HCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGL 693
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 85/162 (52%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P ++N++M FC +G + L M E+G+MP+ ++ LM+ C K+ + ++
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ M ++G +PD+ +Y L+ C+ + ++EA+ L M KG + Y+ ++ GF +
Sbjct: 615 YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYK 674
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+ ++A K+ E+M +G + Y V ++G +++
Sbjct: 675 RKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEIT 716
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L T+ L+ + S + + + MLE P N +++ +N +R +
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI-KNNMRATTE 613
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++K+ H GV+P++ +YNI+++ C ++ A+ L +M E+G +Y L++G
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
++ + A L E+M G V + Y ++
Sbjct: 674 KRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 142/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N ++ + GD+ + L + M G PDV +Y I
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSI 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ +++ A +L +ML+ G VP+ +++TTL++ C+ +K+ A ++ +M +G
Sbjct: 212 LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G ++++M NG P+ +SY TL+ G C +G ++A
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIAL 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ MI + ALI C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 ELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C + + ++L E+
Sbjct: 392 CKKRDSKTASKLLREM 407
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 148/301 (49%), Gaps = 1/301 (0%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
+YF L+ D + YP + F L++ + + A F ++ ++ +P
Sbjct: 115 RYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSF 174
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ + + L F L + H G P+ +Y+I++ C G + A LFN+M
Sbjct: 175 NTLINGYIKLGD-LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEML 233
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ G++P+ ++ L+ G C+ +V+ A+++ + ML++G PD ++Y TL+ LC+K +L+
Sbjct: 234 DNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+ + L+ M + G PD + Y T++ G C+EG A ++ M + V+Y L+
Sbjct: 294 QVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALI 353
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC +G A+K ++ M+S G P +I FC A +L E+ + G
Sbjct: 354 SCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPL 413
Query: 409 P 409
P
Sbjct: 414 P 414
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 12/272 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLID-DILITLKSEHYP--VTPSLF 133
LA+ +FD A + R S ++ LI Y L D D LKS + P ++
Sbjct: 154 LAQSVFD-AITKWGLRPSVVSFNTLI-----NGYIKLGDLDEGFRLKSAMHASGAQPDVY 207
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY LI + D A + F ML+ P ++ + + A +++K
Sbjct: 208 TYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK-VDLAMEIYKQ 266
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ P+ +YN ++ C G++ + L ++M G+ PD SY L+ G C++
Sbjct: 267 MLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD 326
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A++L M+ + D ++YT L++ LCR+ + +A K+L M G PD Y
Sbjct: 327 LEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTM 386
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ FC++ + A K+L +M +G LP +V+
Sbjct: 387 IINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 166/313 (53%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY LI + A F M+ N P N +++ R L+ A
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR-LKEA 301
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ K G+ P+ +YN +M +C +++ A +FN + +RGV P++ SY I++ G
Sbjct: 302 KNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHG 361
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +V+ A++L ++M +PD ++Y +L++ LC+ K+ A KL+ M +G D
Sbjct: 362 FCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD 421
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN+++ C+ + A +L M G P++ +Y TLV GLC G + A+ +
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG+ ++ A+I+GFC+ G DE+ +L ++ + G P+ T+ +I+ + +
Sbjct: 482 DLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKD 541
Query: 426 EMEKLGEVLNEIV 438
E +K ++L E++
Sbjct: 542 ENDKAEKLLREMI 554
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 145/276 (52%), Gaps = 8/276 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDL+ G+ P+ +YN ++ FC G + A LFNKM + P+V ++ I
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI 287
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ ++ A ++L M+ +G PD +Y +L++ C K++ +A + + +G
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
NP+I Y+ ++ GFC+ + +A + ++M N +P++V+Y +L+ GLC G A
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407
Query: 362 KYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M +G PH +++ +++ C +VD+A +L ++ G P T+ +V
Sbjct: 408 KLVDEMHDRGV-PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKG---DTRIVEAGI 453
+C +E V +++ +KG D I A I
Sbjct: 467 LCKNGRLEDARIVFEDLL---VKGYILDVNIYTAMI 499
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 11/285 (3%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRS----MLEFNCKPLPKQLNRILE--LLVTHRNY 181
+ P+++T+ I + +R LK ++ M++ KP N +++ LV N
Sbjct: 278 INPNVYTF--NILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVN- 334
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A +F + + GV PN SY+IM+ FC + A LF +M ++PDV +Y
Sbjct: 335 --KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ +++ A+ L+++M ++G D ++Y ++L++LC+ ++ +A LL +MK +G
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDI Y T+V G C+ GR DA V ED+ G + ++ Y ++ G C G+FD +
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M G P+ +I + + D+A +L E++ G
Sbjct: 513 DLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 142/284 (50%), Gaps = 1/284 (0%)
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R + + N KP Q +IL LV +Y L + +G+ + +I++ F
Sbjct: 61 RLLHQKNPKPSIFQFGKILGSLVKSNHY-STVVSLHRQMEFNGITSDLVILSILINCFSQ 119
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G +++++ K+ + G P+V + L++GLC K Q+++A+ + ++ GF + +S
Sbjct: 120 LGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVS 179
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL+N LC+ + A +LL R+ K P++V YNT++ C+ +A + +M
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
S G P++V+Y L+ G C G A MI + +P+ + L+ GFC ++
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
EA VL ++K G P T+ ++ + C +E+ K + N I
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+F + K G PN + +++ C G I A +K+ G + SY L+
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ Q + A+ LL + K P+ + Y T+++S+C+ K + EA+ L M KG +P
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V YN ++ GFC G+ DA + M PN+ ++ LV G C + AK +
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+M+ +G P ++L+ +C V +V++A + + + G P+ ++ +++ C
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFC-- 363
Query: 425 EEMEKLGEVLN 435
+++K+ E +N
Sbjct: 364 -KIKKVDEAMN 373
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 6/238 (2%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G N SY ++ C G S A L ++ + V P+V Y ++ +C+ VN A
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DL +M++KG PD ++Y L++ C K+++A L +M + NP++ +N +V G
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+E R +A VL M G P++ +Y +L+ C + AK + +G +P+
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+I GFC + KVDEA + +E+ P T+ ++ +C KLG++
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLC------KLGKI 403
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 16/291 (5%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + V PN YN ++ + C ++ A+ L+++M +G+ PDV +Y L+
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C ++ A DL M+ + P+ ++ L++ C++++L+EA +L M +G P
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN+++ +C A + + G PN+ SY ++ G C D A
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED-TWVMIVPQICA 423
+ M P ++LI G C +GK+ A +++E+ G PH+ T+ I+ +C
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG-VPHDKITYNSILDALCK 434
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT--------------RIVEAGIGLEDYLI 460
+++K +L ++ I+ D R+ +A I ED L+
Sbjct: 435 NHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 113/229 (49%)
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
S +L +M G+ D+ IL+ + Q + +L +L G+ P+ ++ TTL
Sbjct: 89 STVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTL 148
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ LC K ++ +A + ++ G + + V Y T++ G C+ G+ A ++L +
Sbjct: 149 IKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLV 208
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
PN+V Y T++ +C + + A M+SKG SP +ALI GFC VGK+ +A
Sbjct: 209 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATD 268
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +++ P+ T+ ++V C +++ VL ++K IK D
Sbjct: 269 LFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDV 317
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 147/266 (55%), Gaps = 1/266 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ AL M E + K N I++ L +++ A +LF H G+ P+ +Y+
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYSG 116
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ +FC +G + A L M ER + PDV ++ L+ L ++ +V+ A ++ DML +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P T++Y ++++ C++ +L +A ++L M K C+PD+V ++T++ G+C+ R +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ +M G + N V+Y TL+ G C G D A+ + +MIS G +P++ +++
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 387 CNVGKVDEACGVLEELLKAGEAPHED 412
C+ ++ +A +LE+L K+ ED
Sbjct: 297 CSKKELRKAFAILEDLQKSEGHHLED 322
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 150/294 (51%), Gaps = 5/294 (1%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+AL M+E +P +N + ++ T A +L + + + YN +
Sbjct: 28 QALALVDRMVEEGHQPYGTIINGLCKMGDT-----ESALNLLSKMEETHIKAHVVIYNAI 82
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C +G A LF +M ++G+ PDV +Y ++ CR + A LL DM+ +
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++++ L+N+L ++ K+ EA ++ M +G P + YN+++ GFC++ R DA +
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L+ M S C P++V++ TL+ G C D + M +G + LI GFC
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
VG +D A +L ++ +G AP+ T+ ++ +C+ +E+ K +L ++ K E
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 5/283 (1%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+E C+P ++ L L+ A L + G P Y ++ C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQ-ALALVDRMVEEGHQP----YGTIINGLCKMG 55
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
D A L +KM E + V Y ++ LC+ A +L +M +KG PD ++Y+
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+++S CR + +A +LL M + NPD+V ++ ++ +EG+ +A ++ DM
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P ++Y +++ G C Q + AK+ + M SK SP LI G+C +VD
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ E+ + G + T+ ++ C +++ ++LN ++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ ++ +M C G + A L ++M E G P Y ++ GLC+ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++LL M + Y +++ LC+ A L M KG PD++ Y+ ++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FCR GR DA ++L DM P++V++ L+ L +G A++ M+ +G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+++I GFC ++++A +L+ + +P T+ ++ C + ++ E+
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 436 EIVKVEIKGDT 446
E+ + I +T
Sbjct: 241 EMHRRGIVANT 251
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 139/242 (57%), Gaps = 1/242 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
I++ L N++ A +LF H+ G+ PN +YN M+ +FC +G S A L M E+
Sbjct: 16 IVDRLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
+ PD+ ++ L+ ++ +V+ A ++ ++ML P T++Y ++++ C++ ++ +A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++L M KGC+PD+V ++T++ G+C+ R + ++ +M G + N V+Y TL+ G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C G D A+ + MIS G +P + H ++ G C+ ++ +A +LE+L K+ +
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHL 254
Query: 411 ED 412
ED
Sbjct: 255 ED 256
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 124/231 (53%)
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G+ A LF +M E+G+ P+V +Y ++ C + + A LL M+ K PD
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++++ L+N+ +++K+ EA ++ M P + YN+++ GFC++ R DA ++L+
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M S GC P++V++ TL+ G C D + M +G + LI GFC VG
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
+D A +L E++ G AP T+ ++ +C+ +E+ K +L ++ K E
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D + T +++ LC+ A L M KG P+++ YN ++ FC GR DA ++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M P++V++ L+ + A++ + M+ P +++I GFC
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+VD+A +L+ + G +P T+ ++ C + ++ E+ E+ + I +T
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 146/256 (57%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y ++MI + ALI G C G+ +A +L E+L G T+ MI+ +
Sbjct: 332 EYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ +++ E+
Sbjct: 392 CKKGDVWTGSKLMKEM 407
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G +I
Sbjct: 331 FEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +++E+ + G P
Sbjct: 391 FCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ R E + ++LE L+ + Y + + ++
Sbjct: 68 VFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + G + +NI+M +FC G+I +A ++F+ + + G+ P V S+ LM G +
Sbjct: 127 SLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+N L M G PD +Y+ L+N LC++ K+ +A +L M G P+ V + T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA------GE 425
P LI G C G ++ A + ++K + + ++ +C E
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIV 449
+M L E+L+ +K+EI T I+
Sbjct: 367 KM--LREMLSVGLKLEIGTYTMII 388
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G +I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K++++M +G +P++V+
Sbjct: 402 KLMKEMQRDGYVPSVVT 418
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGCMP 414
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + +A DL+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 302 CNPDIVHYNTVVLGFCREGRAIDA-----------------------------------C 326
D V Y ++ G C+EGR++DA
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +GC+P++V+
Sbjct: 402 KLLKEMQRDGCMPSVVT 418
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 156/350 (44%), Gaps = 41/350 (11%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY LI++ + AL ML C+P +LE + + +
Sbjct: 138 PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGF-EQ 196
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + G PN +YN+++ C G + A L N++ G PD SY L++
Sbjct: 197 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLK 256
Query: 245 GLC-----------------------------------RKSQVNRAVDLLEDMLNKGFVP 269
GLC R V RA+ +LE M G
Sbjct: 257 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCAT 316
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+T ++NS+C++ ++ +A+KLL M GCNPD + Y TV+ G CR R DA ++L
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+M N C PN V++ T + LC +G+ + A ++ M G + +AL+ GFC
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +D A LE P+ T+ ++ +C E ++ E++ E+++
Sbjct: 437 GHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 3/268 (1%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R A + ++A G + +YN ++ +C G + A L M V PD +
Sbjct: 89 RGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYT 145
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L++ LC + +V A+ LL+DML +G P+ ++YT LL ++CR +A +L M+
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KGC P+IV YN ++ G CREGR DA ++L +PS G P+ VSY TL+ GLC +D
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD 265
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ M+ K P+ LI+ FC G V+ A VLE++ + G A + +++
Sbjct: 266 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
IC ++ ++LN++ DT
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDT 353
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 169/359 (47%), Gaps = 4/359 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++I + R ++L L S + +T L+K S D + F M
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E NC P + ++ + A + + +HG NT NI++ + C G
Sbjct: 275 MEKNCMPNEVTFDMLIRFFC-RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGR 333
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A+ L N M G PD SY +++GLCR + + A +LL +M+ P+ +++ T
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+ LC+K + +A L+ +M GC +V YN +V GFC +G A ++ MP
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP--- 450
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C PN ++Y TL+ GLC+ D A + + M+ P+ + L+ FC G ++EA
Sbjct: 451 CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAI 510
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
++E++++ G P+ T+ ++ I E E+L+ +V + D + IG+
Sbjct: 511 ELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 569
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 153/320 (47%), Gaps = 13/320 (4%)
Query: 102 ILKLGRAK-YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
I K GR F L++D+ Y P +Y ++K + D A + M+
Sbjct: 328 ICKQGRVDDAFKLLNDM------GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVR 381
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
NC P N + +L + + A L + +HG +YN ++ FC G I
Sbjct: 382 NNCPPNEVTFNTFICILC-QKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A LF M P+ +Y L+ GLC +++ A +L+ +ML P+ +++ L+
Sbjct: 441 SALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ C+K L EA +L+ +M GC P+++ YNT++ G ++ + DA ++L + S G
Sbjct: 498 SFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVS 557
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P+++++ +++G L + + A + ++ G P V + ++ G C ++D A
Sbjct: 558 PDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDF 617
Query: 399 LEELLKAGEAPHEDTWVMIV 418
++ G P+E T+++++
Sbjct: 618 FAYMVSNGCMPNESTYIILI 637
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 163/374 (43%), Gaps = 39/374 (10%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
F+ +Y L+ L +K + ++++ + ++ F LI+ + + +RA+
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M E C N ++ + + + AF L +G P+T SY +++
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINS-ICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 211 FC--------------------------FN---------GDISIAYTLFNKMFERGVMPD 235
C FN G I A L +M E G
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y L+ G C + ++ A++L M K P+T++YTTLL LC ++L A +L+
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M C P++V +N +V FC++G +A +++E M +GC PNL++Y TL+ G+
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
+ A + + ++SKG SP ++I +++EA + + G P +
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599
Query: 416 MIVPQICAGEEMEK 429
I+ +C E++
Sbjct: 600 KILLGLCKRCEIDN 613
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 19/301 (6%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDD--ILITLKSEHYPVTPSL 132
AKE+ + R PN N+ IL K LI+ +LI SEH T +
Sbjct: 372 AKELLNEMVRNNCPPNEVTFNTFICILCQK-------GLIEQAIMLIEQMSEH-GCTVGV 423
Query: 133 FTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
TY L+ + D AL+ FRSM CKP +L L L A +L
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER-LDGAAELVA 479
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ PN ++N+++ FC G + A L +M E G P++ +Y L+ G+ +
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
A++LL +++KG PD +++++++ L ++ ++ EA +L ++ G P V YN
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++LG C+ +A M SNGC+PN +Y L+ GL +G+ A+ + ++ S+
Sbjct: 600 KILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSR 659
Query: 371 G 371
G
Sbjct: 660 G 660
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 4/310 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA+ + ++L + + P F I I + L ++A+ M
Sbjct: 355 SYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 414
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C N ++ + ++ A +LF+S PNT +Y ++ C
Sbjct: 415 SEHGCTVGVVTYNALVNGFCV-QGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAER 470
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M P+V ++ +L+ C+K + A++L+E M+ G P+ ++Y T
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL+ + + +A +LL + KG +PD++ +++++ +E R +A ++ + G
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG 590
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P V Y ++ GLC + D A + M+S G P+ S LI+G + G + EA
Sbjct: 591 MRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQ 650
Query: 397 GVLEELLKAG 406
+L L G
Sbjct: 651 DLLSVLCSRG 660
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PDV L++ LCR+ + + A +L G D +Y TL+ CR L A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L+ M V PD Y ++ C GR DA +L+DM GC PN+V+Y L+
Sbjct: 131 RRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C F+ A + M +KG +P+ + +I G C G+VD+A +L L G P
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ ++ +CA + + + E+ E+++
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMME 276
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 5/227 (2%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRI 171
ID L +S P P+ TY + N D A + ML +C P N +
Sbjct: 439 IDSALELFRS--MPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFN-V 495
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L + +L A +L + +HG PN +YN ++ + A L + + +G
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV ++ ++ L ++ ++ AV L + + G P + Y +L LC++ ++ A
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAI 615
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
M GC P+ Y ++ G EG +A +L + S G L
Sbjct: 616 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 84/230 (36%), Gaps = 38/230 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F +PN TY L+ L A+ +++ + P F L+
Sbjct: 442 ALELFRSMPCKPN----TITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL-------------ELL--------- 175
+ + + A++ M+E C P N +L ELL
Sbjct: 498 SFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVS 557
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + + A LF G+ P YN ++ C +I A
Sbjct: 558 PDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDF 617
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
F M G MP+ +Y IL++GL + + A DLL + ++G + L+
Sbjct: 618 FAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 164/344 (47%), Gaps = 3/344 (0%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
I++ + G+ ++ IL T ++ + +F+ LI Y ES A++ +R E
Sbjct: 38 IVVSRKGKGSASAVFAAILETKGTQRSDIY--VFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ ++LE L+ + Y + + ++ + + G + +NI+M +F G+I +
Sbjct: 96 KFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRL 154
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A ++F+ + + + P V S+ LM G + ++ L M G PD +Y+ L+N
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC++ K+ +A +L M G P+ V + T++ G C+ GR A ++ + M S P
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L++Y TL+ GLC +G A+ + M KG P LI G C G ++ A
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++++K + + ++ +C ++L E++ V +K
Sbjct: 335 KKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 113/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E +++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLD 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 147 IRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSV 206
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S ++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 207 LINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQX 266
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDJ+ YNT+V G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 267 LLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAF 326
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 327 EHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEF 386
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 387 CKKGDVWKGSKLLKEM 402
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + +YF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 106 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPS 165
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 166 VVSYNTLMNGYIRLGD-LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELF 224
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 225 DEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKK 284
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L +A+ L+ M KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 285 GDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAY 344
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 345 TALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 404
Query: 405 AGEAP 409
G P
Sbjct: 405 NGHVP 409
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y
Sbjct: 217 MDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNT 276
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K +N+A L+++M KG PD +YTTL++ C++ L A++ RM +
Sbjct: 277 LVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQEN 336
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G C+EGR+ DA K+L +M S G P+ +Y ++ C +G
Sbjct: 337 IRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGS 396
Query: 362 KYMQLMISKGFSPHFSVSHALIKG 385
K ++ M G P + L+ G
Sbjct: 397 KLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML P N ++ L + L A L
Sbjct: 239 FTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCK-KGDLNQAHGLIDEM 297
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 357
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PDT +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 358 XDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVL 417
Query: 313 VLG 315
+ G
Sbjct: 418 MNG 420
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 176/371 (47%), Gaps = 1/371 (0%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
+ + S+ A +F SN + +L+ + YFS ++ +
Sbjct: 127 QFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNL 186
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ YL + NL A + +L+ P + N ++ L + A
Sbjct: 187 QIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK-INEAQ 245
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF K G+ P S+N ++ +C +G++ + L M E V PDV +Y +L+ GL
Sbjct: 246 LLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGL 305
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ Q++ A L +M ++G VP+ +++TTL+N C + ++ +M KG PD+
Sbjct: 306 CKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDV 365
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNT++ G C+ G +A K++ +M G P+ +Y L+ G C +G + A + +
Sbjct: 366 ITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKE 425
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ +G ALI GFC G+V EA L E+L+AG P + T+ M++ C +
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD 485
Query: 427 MEKLGEVLNEI 437
++ ++L E+
Sbjct: 486 VKTGFKLLKEM 496
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 155/319 (48%), Gaps = 11/319 (3%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ-----LNRILELLVTHRNYLRPAF 186
+F+ L+ Y +S A++ FR + + N + +P +R+++L N PA+
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQ-IPFHSCGYLFDRLMKL-----NLTSPAW 210
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ G P+ +N++M C I+ A LF ++ +RG+ P V S+ L+ G
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +++ L M+ PD +Y+ L+N LC++ +L +A KL M +G P+
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V + T++ G C GRA ++ + M G P++++Y TL+ GLC G AKK +
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIE 390
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M +G P LI G C G ++ A + +E++K G + ++ C +
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 427 MEKLGEVLNEIVKVEIKGD 445
+ + L E+++ IK D
Sbjct: 451 VIEAERTLREMLEAGIKPD 469
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 1/286 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI Y +S D+ + R M+E P + ++ L L A LF
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCK-EGQLDDANKLFLEM 321
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G++PN ++ ++ C G + ++ +M +GV PDV +Y L+ GLC+ +
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L+ +M +G PD +YT L++ C++ L A ++ M +G D V + +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFCREG+ I+A + L +M G P+ +Y ++ G C +G K ++ M G
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + L+ G C G++ A +L+ +L G P + T+ +++
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + A +T R MLE KP ++ + ++ F L K
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK-KGDVKTGFKLLKEM 496
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
G +P +YN+++ C G + A L + M GV+PD +Y IL++
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 171/362 (47%), Gaps = 13/362 (3%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I C++ + A+ LL K + A QPN TY LI L R + + DI
Sbjct: 205 INGLCKIGETAAAAG--LLKK--MEEAGCQPNM----VTYSTLIDSLCRDRLVNEALDIF 256
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+K++ ++P +FTY LI+ + + A M N P N +++
Sbjct: 257 SYMKAK--GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ A + K+ + GV PN +Y+ +M + D+ A LF+ M +G P++
Sbjct: 315 -KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNI 373
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
SY IL+ G C+ +++ A+ L +M+++G P+ +SY TL++ C+ KLREA L
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M G PD+ Y+ ++ GFC++G A ++ M S PNLV Y LV +C G
Sbjct: 434 MCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGN 493
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A+K + +G PH + +I G C G +DEA + G P E ++ +
Sbjct: 494 HKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNV 553
Query: 417 IV 418
I+
Sbjct: 554 II 555
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 147 DRALKTFRSMLEFNCKPLP--KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D AL +F ML KPLP Q ++L +V Y L K G+ PN +
Sbjct: 74 DDALASFNHMLHR--KPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL 131
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I M FC + + +++ K+ + G+ P + ++ L+ GLC+ + +AV+L +DM+
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG PD +Y T++N LC+ + A LL +M+ GC P++V Y+T++ CR+ +
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M + G P++ +Y +L+ GLC + A + M S P + L+
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
FC GKV EA GVL+ + + G P+ T+
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTY 341
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 160/360 (44%), Gaps = 46/360 (12%)
Query: 102 ILKLGRAKYFSLIDDILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML 157
I+K+G +Y+ D++I+L + E ++P+++T + + + D ++
Sbjct: 102 IVKMG--QYY----DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVI 155
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+ +P ++ L + + A +LF G P+ +YN ++ C G+
Sbjct: 156 KLGLQPTIVTFTTLINGLCKVGEFAQ-AVELFDDMVAKGCQPDVYTYNTIINGLCKIGET 214
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
+ A L KM E G P++ +Y L+ LCR VN A+D+ M KG PD +YT+L
Sbjct: 215 AAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSL 274
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP---- 333
+ LC+ + +EA LL M PDIV +N +V FC+EG+ +A VL+ M
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334
Query: 334 -------------------------------SNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ GC PN+ SY L+ G C D A +
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
MI +G +P+ + LI GFC +GK+ EA + + G P T+ +++ C
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 3/303 (0%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P++ TY LI L + AL F M P +++ L
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ + A L ++P+ ++N+++ FC G +S A + M E GV P+V +Y
Sbjct: 283 RW-KEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTY 341
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM G + V A L M+ KG P+ SY L+N C+ K++ EA +L M
Sbjct: 342 SSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIH 401
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P+ V YNT++ GFC+ G+ +A + +M +NG LP+L +Y L+ G C QG
Sbjct: 402 QGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGK 461
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M S P+ + L+ C G +A + EL G PH + I+
Sbjct: 462 AFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIIN 521
Query: 420 QIC 422
+C
Sbjct: 522 GLC 524
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 3/295 (1%)
Query: 130 PSLFTYLIKIYAESNLPDRALKT--FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY I + + A + M E C+P + +++ L R + A D
Sbjct: 196 PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDR-LVNEALD 254
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F G+ P+ +Y +++ C A L N+M +MPD+ ++ +L+ C
Sbjct: 255 IFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V+ A+ +L+ M G P+ ++Y++L+ + EA KL M KGC P+I
Sbjct: 315 KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF 374
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G+C+ R +A ++ +M G PN VSY TL+ G C G A+ + M
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ G P L+ GFC G + +A + + P+ + ++V +C
Sbjct: 435 CTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ +L +M G+ P++ + I M C+ +V+ +L ++ G P +++TTL+
Sbjct: 111 VVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLI 170
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N LC+ + +A +L M KGC PD+ YNT++ G C+ G A +L+ M GC
Sbjct: 171 NGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQ 230
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+V+Y TL+ LC + + A M +KG SP +LI+G C + EA +
Sbjct: 231 PNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASAL 290
Query: 399 LEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLG 431
L E+ P T+ ++V C G+ E LG
Sbjct: 291 LNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALG 324
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY +Y S D A K F M+ CKP N ++ + + A
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKR-IDEA 392
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF G+ PN SYN ++ FC G + A LF M G +PD+ +Y IL+ G
Sbjct: 393 MQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDG 452
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + +A L M + P+ + YT L++++C+ ++A KL + V+G P
Sbjct: 453 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPH 512
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ Y T++ G C+EG +A + +M ++GC P+ +SY ++ GL
Sbjct: 513 VQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
Query: 111 FSLIDDILITLKSEHYPVT----PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPL 164
+SL D++ K H +T P++F+Y LI Y ++ D A++ F M+ P
Sbjct: 348 YSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPN 407
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ LR A DLF++ +G LP+ +Y+I++ FC G + A+ LF
Sbjct: 408 NVSYNTLIHGFC-QLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLF 466
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
M + P++ Y IL+ +C+ A L ++ +G P YTT++N LC++
Sbjct: 467 RAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKE 526
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
L EA + M+ GC PD + YN ++ G + A ++ +M G + ++
Sbjct: 527 GLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV-NRAVDLLEDMLNKGFVPDTLSY 274
+I A FN M R +P + + L+ + + Q + + L + M G P+ +
Sbjct: 72 NIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL 131
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+ +N C+ +++ + +L ++ G P IV + T++ G C+ G A ++ +DM +
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC P++ +Y T++ GLC G A ++ M G P+ LI C V+E
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A + + G +P T+ ++ +C ++ +LNE+ + I D
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 187/383 (48%), Gaps = 24/383 (6%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSL 113
NS++ IG RV +++ P ++F Y + F +N +L A
Sbjct: 116 NSRN-IGKATRVMEILERYGKP----DVFAYNALISGFIKAN--------QLENA----- 157
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
+ +L +KS + P + TY I I + D AL+ F +L+ NC+P +
Sbjct: 158 -NRVLDRMKSRGF--LPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTIL 214
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+E + + A L G+ P+T +YN ++R C + A+ L + RG
Sbjct: 215 IEATILDGG-IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
PD+ +Y IL++ L + + + L+ +M++ G P+ ++++ L+ +LCR K+ EA
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
LL MK KG PD Y+ ++ GFCREGR A + LE M S+GCLP++V+Y T++ GL
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G D A + + + G P+ S + L + G A ++ +LL G P E
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453
Query: 412 DTWVMIVPQICAGEEMEKLGEVL 434
T+ ++ +C +++ E+L
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELL 476
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 9/309 (2%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L T LIK + S +A + +LE KP N ++ + N L A +
Sbjct: 106 LCTKLIKGFFNSRNIGKATRVME-ILERYGKPDVFAYNALISGFI-KANQLENANRVLDR 163
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G LP+ +YNIM+ +FC G + +A +F ++ + P V +Y IL++
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A+ LL++ML+KG PDTL+Y ++ +C++ + +A++LL + +GC PDI+ YN
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+ + K++ +M S GC PN+V++ L+G LC G + A ++ M KG
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-------AG 424
P LI GFC G++D A LE ++ G P + I+ +C A
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403
Query: 425 EEMEKLGEV 433
E EKL EV
Sbjct: 404 EVFEKLDEV 412
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 148/307 (48%), Gaps = 3/307 (0%)
Query: 130 PSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY I I A D A+K ML +P N I+ + + AF+
Sbjct: 206 PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEM-MVDKAFE 264
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L +S G P+ +YNI++R G S L ++M G P+V ++ IL+ LC
Sbjct: 265 LLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLC 324
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R +V AV+LL M KG PD Y L+ CR+ +L A + L M GC PDIV
Sbjct: 325 RDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIV 384
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+YNT++ G CR G+A A +V E + GC PN+ SY TL L G A + + +
Sbjct: 385 NYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKL 444
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++G P ++LI C G VDEA +L ++ P+ ++ +I+ +C
Sbjct: 445 LNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRA 504
Query: 428 EKLGEVL 434
EVL
Sbjct: 505 NDAIEVL 511
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 177/369 (47%), Gaps = 21/369 (5%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI----LKLGRAKYFSLI 114
IGS C KL LA EIF+ + N + TY ILI L G L+
Sbjct: 180 IGSFCSRGKLD-------LALEIFEELLKD-NCEPTVITYTILIEATILDGGIDVAMKLL 231
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D++L + P TY +I+ + + D+A + RS+ CKP N +L
Sbjct: 232 DEML------SKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILL 285
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L++ R L G PN +++I++ C +G + A L M E+G+
Sbjct: 286 RTLLS-RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD Y L+ G CR+ +++ A + LE M++ G +PD ++Y T++ LCR K +A +
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ ++ GC P++ YNT+ G A +++ + + G P+ ++Y +L+ LC
Sbjct: 405 VFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLC 464
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
GM D A + + M S + P+ + ++ G C V + ++A VL + + G P+E
Sbjct: 465 RDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524
Query: 413 TWVMIVPQI 421
T+++++ I
Sbjct: 525 TYILLIEGI 533
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ ER PDV +Y L+ G + +Q+ A +L+ M ++GF+PD ++Y ++ S C +
Sbjct: 128 EILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187
Query: 286 KL-----------------------------------REAYKLLCRMKVKGCNPDIVHYN 310
KL A KLL M KG PD + YN
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G C+E A ++L + S GC P++++Y L+ L +G + +K + MIS
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P+ LI C GKV+EA +L + + G P + ++ C ++
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367
Query: 431 GEVLNEIV 438
E L ++
Sbjct: 368 TEFLEYMI 375
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL----------------------------- 272
L+ CR + N ++ LE M++KG+ PD +
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 273 -----SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+Y L++ + +L A ++L RMK +G PD+V YN ++ FC G+ A +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ E++ + C P +++Y L+ G DVA K + M+SKG P +A+I+G C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
VD+A +L L G P T+ +++ + + + + ++++E++ + K
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK 310
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LLN CR K E+ L M KG PD++ ++ GF A +V+E + G
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P++ +Y L+ G + A + + M S+GF P + +I FC+ GK+D A
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ EELLK P T+ +++ ++ ++L+E++ ++ DT A I
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250
>gi|357168491|ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 185/382 (48%), Gaps = 40/382 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ A+ D L +F A + +++ S + Y ++I +L A+ F ++++L+
Sbjct: 37 APNEVLKIFANIRDASLITSVFRKACARRDYKPSEALYSLMIDRLACARRFGDVEELLVR 96
Query: 121 LKSEHYPVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+ E + + F LIK+Y +N P+RA++ +M +NC
Sbjct: 97 ARVEKFRFSDEFFYRLIKMYGNVANHPERAMEMLYAMPGYNC------------------ 138
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
P+TK++N ++ + + ++ GV D +
Sbjct: 139 ------------------WPSTKTFNYVLHMLVCKRQYEVIHEVYESAPWLGVTLDTCCF 180
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL++GLC+ + + A+ LL +M + +P+ ++Y+TL++ LC+ ++ +A++L RM+
Sbjct: 181 NILIKGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRK 240
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ + D V YN ++ G CREG+ A + + M S GC PN +Y+ L+ L F
Sbjct: 241 EEIDADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTSRNFTE 300
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK + +M ++G P FS LI G C+V +++ + ++++ G P TW ++
Sbjct: 301 AKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLEDGHLIFKQMVDQGFIPRMGTWTKLLT 360
Query: 420 QIC---AGEEMEKLGEVLNEIV 438
+ G+ ++ L + E+V
Sbjct: 361 SMSLTYTGDFLDNLIHLNRELV 382
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 1/185 (0%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAI 323
+ + P Y+ +++ L ++ + +LL R +V+ D Y + +
Sbjct: 65 RDYKPSEALYSLMIDRLACARRFGDVEELLVRARVEKFRFSDEFFYRLIKMYGNVANHPE 124
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A ++L MP C P+ ++ ++ L + ++V + + G + + LI
Sbjct: 125 RAMEMLYAMPGYNCWPSTKTFNYVLHMLVCKRQYEVIHEVYESAPWLGVTLDTCCFNILI 184
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
KG C GK DEA +L E+ K P+ T+ ++ +C ++K E+ + K EI
Sbjct: 185 KGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRKEEID 244
Query: 444 GDTRI 448
DT +
Sbjct: 245 ADTVV 249
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 125/226 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +FK G+ P+ YN +++ C G I A L N+M E+G PD+ +Y +++
Sbjct: 454 AMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIIN 513
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ A L+ D + KG +PD +Y TL++ CR+ KL A +L+ RM +G P
Sbjct: 514 GLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTP 573
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YNT++ G C+ ++ + ++ + M GC PN+++Y T++ LC+ + A +
Sbjct: 574 DVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLL 633
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
M SKG +P LI GFC VG +D A G+ + K + H
Sbjct: 634 GEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 179/393 (45%), Gaps = 35/393 (8%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLP 146
+ F+H+ TY ++ KLG F+ ++++L ++S + ++ ++ Y
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKI 171
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLV-------THRNYLR---------------- 183
A+ TF M FNC P N I+ +LV H+ Y+R
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231
Query: 184 -----------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
A L ++ G N +Y ++ F GD A LF++M E +
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV ++ L+ LC+K V + L + +L +G P+ ++ + LC++ L A +
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
LL + +G PD+V YNTV+ G CR+ R ++A + L M + G PN +Y +++ G C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+GM A + ++ + KGF P +L+ GFC G D+A V ++ L G P
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ ++ +C + +++NE+ + K D
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 166/355 (46%), Gaps = 39/355 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY L+ + + PD+A+ F+ L +P N +++ L + + PA
Sbjct: 433 PDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC-QQGLILPALQ 491
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G P+ +YN+++ C G +S A L +G +PD+ +Y L+ G C
Sbjct: 492 LMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYC 551
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R+ +++ A++L+ M ++G PD ++Y TLLN LC+ K E ++ M KGC P+I+
Sbjct: 552 RQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNII 611
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA------- 360
YNT++ C + +A +L +M S G P++VS+ TL+ G C G D A
Sbjct: 612 TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 671
Query: 361 -KKY-----------------------MQL-----MISKGFSPHFSVSHALIKGFCNVGK 391
K+Y M L M G P LI GFC G
Sbjct: 672 EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGN 731
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
V++ L E ++ G P T+ ++ +C ++++ +++ +V+ +I DT
Sbjct: 732 VNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 1/291 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
DRA + F MLE P N+++ L + ++ + LF K GV PN ++NI
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALC-KKGFVLESERLFDKVLKRGVCPNLFTFNI 335
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C G + A L + G+ PDV +Y ++ GLCRKS+V A + L M+N G
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F P+ +Y ++++ C+K + +A ++L KG PD Y ++V GFC++G A
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
V +D G P+++ Y TL+ GLC QG+ A + M M KG P + +I G
Sbjct: 456 AVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C +G + +A ++ + + G P T+ +V C +++ E++N +
Sbjct: 516 CKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRM 566
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 5/313 (1%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
V P+LFT+ I I E +L DRA++ + +P N ++ L +
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSL-DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
L K + G PN +YN ++ +C G + A + +G PD +Y L+
Sbjct: 385 EECLHKMVNG-GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVN 443
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++A+ + +D L KG P + Y TL+ LC++ + A +L+ M KGC P
Sbjct: 444 GFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKP 503
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI YN ++ G C+ G DA ++ D + GC+P++ +Y TLV G C Q D A + +
Sbjct: 504 DIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELV 563
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M S+G +P + L+ G C K +E + + + + G AP+ T+ I+ +C
Sbjct: 564 NRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNS 623
Query: 425 EEMEKLGEVLNEI 437
+++ + ++L E+
Sbjct: 624 KKVNEAVDLLGEM 636
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 123/235 (52%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K A G P+ +Y ++ FC +GD A +F +G+ P + Y L++GLC
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ + A+ L+ +M KG PD +Y ++N LC+ L +A L+ KGC PDI
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIF 541
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT+V G+CR+ + A +++ M S G P++++Y TL+ GLC + + + M
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
KG +P+ + +I+ CN KV+EA +L E+ G P ++ ++ C
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFC 656
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP + TY L+ ++ + ++ F++M E C P N I+E L + + A
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK-VNEA 629
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQ 244
DL G+ P+ S+ ++ FC GD+ AY LF M ++ V +Y I++
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ + A+ L +M G PD +Y L++ C+ + + YK L KG P
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ + V+ C E + +A ++ M +P+ V+
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I L +K + D+L +KS+ +TP + ++ LI + + D A FR
Sbjct: 612 TYNTIIESLCNSKKVNEAVDLLGEMKSK--GLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669
Query: 155 SM-LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M +++ N I+ N ++ A LF K+G P+ +Y +++ FC
Sbjct: 670 GMEKQYDVSHTTATYNIIISAFSEQLN-MKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G+++ Y + E+G +P + ++ ++ LC + +V AV ++ M+ K VPDT++
Sbjct: 729 TGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 140/247 (56%), Gaps = 5/247 (2%)
Query: 204 YNIMMRAFCFNGDISIAYTLF-NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
YNI++++ C GD + A +F +M GV P + +Y ++ GLC+ + + ++L E++
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ +G PD ++Y TL++SLC+ L EA +L M +GC P++V Y+ ++ G C+ GR
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 323 IDACKVLEDMPSNGC--LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF--SPHFSV 378
+A +++++M C LPN+++Y + + GLC Q M A + M+ + SP
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI G C G++DEAC V ++++ G P+ T+ +V +C ++ME+ ++ +V
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 439 KVEIKGD 445
+ D
Sbjct: 244 DKGVTPD 250
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 157/308 (50%), Gaps = 11/308 (3%)
Query: 148 RALKTFRS-MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
RAL+ FR M P N I+ L N L +LF+ + G P+ +YN
Sbjct: 19 RALEIFRGEMARDGVAPTIVTYNTIINGLC-KSNDLGAGMELFEELVERGHHPDVVTYNT 77
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + C GD+ A L M RG +P+V +Y +L+ GLC+ +++ A +L+++M K
Sbjct: 78 LIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 137
Query: 267 --FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGFCREGRA 322
+P+ ++Y + L+ LC++ EA +L+ ++ +PD V ++T++ G C+ G+
Sbjct: 138 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQI 197
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+AC V +DM + G +PN+++Y LV GLC + A ++ M+ KG +P L
Sbjct: 198 DEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 257
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPH-----EDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ FC +VDEA +L + G P+ + T+ +++ C E+ + E+
Sbjct: 258 VDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM 317
Query: 438 VKVEIKGD 445
V ++ D
Sbjct: 318 VAKNLQPD 325
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 160/357 (44%), Gaps = 47/357 (13%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY +I +SN ++ F ++E P N +++ L + L A
Sbjct: 33 VAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD-LEEA 91
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-------------- 231
L G +PN +Y++++ C G I A L +M +
Sbjct: 92 RRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 151
Query: 232 -------------------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
V PD ++ L+ GLC+ Q++ A + +DM+ G
Sbjct: 152 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGG 211
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+VP+ ++Y L+N LC+ K+ A+ ++ M KG PD++ Y+ +V FC+ R +A
Sbjct: 212 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 271
Query: 327 KVLEDMPSNGCLPNL-----VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
++L M S GC PN+ V++ L+ G C G F+ A + M++K P A
Sbjct: 272 ELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 331
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI G C G+V+ A +L+ + G P+ T+ +V +C +E+ + L E+V
Sbjct: 332 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 388
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 165/350 (47%), Gaps = 8/350 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L + +++ + + V P++ TY + + ++ A + R
Sbjct: 109 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 168
Query: 155 SMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
S+ + + + P + L + + A +F G +PN +YN ++ C
Sbjct: 169 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG-----FV 268
+ A+ + M ++GV PDV +Y +L+ C+ S+V+ A++LL M ++G V
Sbjct: 229 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLV 288
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +++ L+ C+ +A L M K PD++ + ++ G C+ G+ A +
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ M + G PN+V+Y LV GLC G + A ++++ M+S G P +L+ C
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ D+A ++ EL G P T+ ++V + + E+ VL E+V
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 139/281 (49%), Gaps = 6/281 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP---LPKQLN-RILELLVTHRNY 181
VTP + TY L+ + +++ D AL+ M C P +P ++ IL
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A LF+ + P+ ++ ++ C G + A + + M GV P+V +Y
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A LE+M++ G VPD+++Y +L+ +LCR + +A +L+ +K G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD V YN +V G + G+ A VLE+M G P+ ++ GL G
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ ++++++KG P + +++ C GK+D+ +++E
Sbjct: 487 ELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR-ILELL----- 175
K+ ++ +LF ++ A++ PD + TF ++++ CK + R IL+L+
Sbjct: 303 KAGNFEQASALFEEMV---AKNLQPD--VMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357
Query: 176 ----VTHR---------NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
VT+ + A + G +P++ +Y ++ A C A
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
L +++ G PD +Y IL+ GL + + +A+ +LE+M+ KG PD+ ++ + L
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH 477
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
R L +LL + KG PD ++++ CR G+ D
Sbjct: 478 RSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + G + + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL ++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A +++DM G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + V ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + L F L + GV P+ +Y++++ + A LF
Sbjct: 177 AVSYNTLMNGYI-RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M KG PD + Y T++ G C+EG A + + M + V Y
Sbjct: 296 GDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G +P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS +Y L+ Y + D + +ML +P + ++ L + + +
Sbjct: 171 WGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGL-SKESKMD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 230 DADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL++DM KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 350 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMNG 431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 113/235 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + ++ E G + + ILM C+ + A + + + G P +SY TL+
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLM 184
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N R L E ++L M G PD+ Y+ ++ G +E + DA ++ ++M G +
Sbjct: 185 NGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLV 244
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ P + LI G C G + +A +
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL 304
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++++ + G P + T+ ++ C +++ E +++ I+ D + A I
Sbjct: 305 IDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 167/338 (49%), Gaps = 12/338 (3%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
C++ + +QS L KEI A +PN TY I+I + ++ + +
Sbjct: 219 CKIGQTYEAQS---LMKEILK-AGYEPNV----FTYSIIINCYCKLDKVEEAWEVFMKMI 270
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
+ F LI + ++ + + A+K F M + CK N +++ L R +
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A DLF G+ P +YN +++ FC +S A F++M E P+V +Y IL
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSIL 389
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ ++ A LEDM G+ P ++Y L+N C+ +L+ A +MK+ GC
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC 449
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+ V +NT++ G C+ RA D ++L M + GC P++++Y L+ GLC + A++
Sbjct: 450 APNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 509
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
M +P+ + + LI+G C KV+EA +L+
Sbjct: 510 LFDGMAC---APNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 143/260 (55%), Gaps = 7/260 (2%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N L A + FK GV P+ +SY+I++ A +G ++ A+ LF+ M PD+ +Y
Sbjct: 155 NRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTY 211
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+LM G C+ Q A L++++L G+ P+ +Y+ ++N C+ K+ EA+++ +M
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ--GMF 357
C P+ V +NT++ GFC+ G DA K+ +M GC +V+Y TL+ LC + G++
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ +L G +P ++LI+GFC+ ++ EA +E ++ AP+ T+ ++
Sbjct: 332 TAVDLFNKLE-GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE-MEGKCAPNVITYSIL 389
Query: 418 VPQICAGEEMEKLGEVLNEI 437
+ +C M++ + L ++
Sbjct: 390 IDGLCKVRRMKEAAKTLEDM 409
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 138/275 (50%), Gaps = 8/275 (2%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N +L LV+ R + A LFK PN +YN+++R FC G + A ++F+ M
Sbjct: 1 NALLSGLVSARKH-DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G++P+ + L+ GLC Q++ A+ L +M F+P + S+ LL ++R
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID----ACKVLEDMPSNGCLPNLVSY 344
+A L M+ + YN V+ G C E ++ + A + ++M ++G P+L SY
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ L D G A M SP + L+ G+C +G+ EA +++E+LK
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
AG P+ T+ +I+ C +++E+ EV ++++
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 136/302 (45%), Gaps = 40/302 (13%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++FTY +I Y + + + A + F M+E NC
Sbjct: 241 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC-------------------------- 274
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+PN ++N ++ FC G + A LF +M + G + +Y L+ LC
Sbjct: 275 ----------VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 324
Query: 248 RK-SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+K V AVDL + G P ++Y +L+ C ++L EA + M+ K C P++
Sbjct: 325 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNV 383
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y+ ++ G C+ R +A K LEDM ++G P +V+Y L+ G C G A + +
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEK 443
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M G +P+ + + LI G C + ++ +L + G P T+ ++ +C+
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503
Query: 427 ME 428
+E
Sbjct: 504 VE 505
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 1/357 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L AK + + +++ + P F LI + L +R + M
Sbjct: 266 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 325
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E C P + I++ + +L A ++ +G+ PN YN +++ C
Sbjct: 326 VEHGCTPDIRMYATIIDG-ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 384
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
L +MF++ D ++ IL+ C+ V+R ++LLE ML G +PD ++YTT
Sbjct: 385 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 444
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N C++ + EA LL M GC P+ + Y V+ G C R +DA ++ M G
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C N +++ TL+ LC +G+ + A + ++ M+ G SP +I G GK DEA
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 564
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+L ++ G +P+ + I + + K+ ++ + I I+ D + A I
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 621
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 40/351 (11%)
Query: 127 PVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
PV P+ +TY + + A + D AL M C P+P + ILE + R
Sbjct: 154 PVPPNAYTYFPVVRALCARGRIAD-ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGF-R 211
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + + H G + + N+++ A C G + A L + G PDV SY ++
Sbjct: 212 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL 271
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC + +L+E+M+ P+ +++ TL++ LCR +++L +M GC
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 331
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------ 351
PDI Y T++ G C+EG A ++L MPS G PN+V Y TL+ GL
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391
Query: 352 -----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
C G+ D + ++ M+ G P +I GFC
Sbjct: 392 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 451
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E ++++++++
Sbjct: 452 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 502
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y L+ L A+ + +++L + + P+ F
Sbjct: 352 VAHEILN---RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 408
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ MLE C P ++ + A L KS
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC-KEGLIDEAVMLLKSMTA 467
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C A L ++M ++G + ++ L+ LC+K V +
Sbjct: 468 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 527
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 528 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 587
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC +G + A +++ M+S G P
Sbjct: 588 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 647
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LI+G + G V EA +L EL G
Sbjct: 648 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 3/240 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YN M+ +C G + A L + V P+ +Y +++ LC + ++ A+ +L++M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+G P Y +L + CR R A ++L + +GC D+ + N V+ C +G
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A +L D+PS GC P++VSY ++ GLC + ++ M+ M+ P+ + LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C G + VL ++++ G P + I+ IC +E E+LN + +K
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G CR Q+ A L + P+ +Y ++ +LC + ++ +A +L M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+GC P Y+ ++ CR G A +VLED+ + GC ++ + ++ +CDQG D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++ + S G P +A++KG C + ++EE+++ P+ T+ ++
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C E++ EVL ++V+ D R+
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRM 336
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 41/266 (15%)
Query: 112 SLIDDILITLKS--EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
L+D ++ L+ EH P + TY +I + + L D A+ +SM CKP
Sbjct: 418 GLVDRVIELLEQMLEH-GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS 476
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+L+ L + ++ A DL + G N ++N ++ C G + A L +M
Sbjct: 477 YTIVLKGLCSAERWVD-AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 535
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL---------- 277
G PD+ SY ++ GL + + + A++LL M+NKG P+T+ Y+++
Sbjct: 536 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 595
Query: 278 -------------------------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++SLC++ + A + L M GC P+ Y +
Sbjct: 596 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 655
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCL 338
+ G EG +A ++L ++ S G L
Sbjct: 656 IRGLASEGFVKEAQEMLTELCSKGAL 681
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 142/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N ++ + GD+ + L + M G PDV +Y I
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSI 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ +++ A +L +ML+ G VP+ +++TTL++ C+ +K+ A ++ +M +G
Sbjct: 212 LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G ++++M NG P+ +SY TL+ G C +G ++A
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIAL 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ MI + ALI C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 ELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C + + ++L E+
Sbjct: 392 CKKRDSKTASKLLREM 407
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 148/301 (49%), Gaps = 1/301 (0%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
+YF L+ D + YP + F L++ + + A F ++ ++ +P
Sbjct: 115 RYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSF 174
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ + + L F L + H G P+ +Y+I++ C G + A LFN+M
Sbjct: 175 NTLINGYIKLGD-LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEML 233
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ G++P+ ++ L+ G C+ +V+ A+++ + ML++G PD ++Y TL+ LC+K +L+
Sbjct: 234 DNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+ + L+ M + G PD + Y T++ G C+EG A ++ M + V+Y L+
Sbjct: 294 QVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALI 353
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC +G A+K ++ M+S G P +I FC A +L E+ + G
Sbjct: 354 SCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPV 413
Query: 409 P 409
P
Sbjct: 414 P 414
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 12/272 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLID-DILITLKSEHYP--VTPSLF 133
LA+ +FD A + R S ++ LI Y L D D LKS + P ++
Sbjct: 154 LAQSVFD-AITKWGLRPSVVSFNTLI-----NGYIKLGDLDEGFRLKSAMHASGAQPDVY 207
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY LI + D A + F ML+ P ++ + + A +++K
Sbjct: 208 TYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK-VDLAMEIYKQ 266
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ P+ +YN ++ C G++ + L ++M G+ PD SY L+ G C++
Sbjct: 267 MLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGD 326
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A++L M+ + D ++YT L++ LCR+ + +A K+L M G PD Y
Sbjct: 327 LEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTM 386
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ FC++ + A K+L +M +G +P +V+
Sbjct: 387 IINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++++++ A L ++ML K VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M + ++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L N +
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLC-KENKMD 229
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF ++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 230 DANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 289
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL+++M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 290 YGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 410 LKEMQRDGHVPSVVTYNVLMNG 431
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + G + + L + M GV PDV +Y +
Sbjct: 133 IRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSV 192
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 193 LINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 252
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A +++DM G P+ ++Y TL+ G C +G+ A
Sbjct: 253 LLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAF 312
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + +I + V ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 313 EHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEF 372
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 373 CKKGDVWKGSKLLKEM 388
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 92 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 151
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + L F L + GV P+ +Y++++ C + A LF
Sbjct: 152 AVSYNTLMNGYI-RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELF 210
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 211 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 270
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M KG PD + Y T++ G C+EG + A + + + + V Y
Sbjct: 271 GDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVY 330
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G +P +I FC G V + +L+E+ +
Sbjct: 331 TALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 390
Query: 405 AGEAP 409
G P
Sbjct: 391 DGHVP 395
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS +Y L+ Y + D + +ML +P + ++ L +
Sbjct: 146 WGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK-MD 204
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+
Sbjct: 205 DADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 264
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+K + +A DL++DM KG PD ++YTTL++ C++ L A++ R+ +
Sbjct: 265 YGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIR 324
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G K
Sbjct: 325 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL 384
Query: 364 MQLMISKGFSPHFSVSHALIKG 385
++ M G P + L+ G
Sbjct: 385 LKEMQRDGHVPSVVTYNVLMNG 406
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 8/304 (2%)
Query: 125 HYPVTPSLFT---YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---H 178
H+ T +F+ L+++ A F ++LE K + + L+T
Sbjct: 2 HFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILE--TKGTQRSDIYVFSGLITAYLE 59
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+LR A + + KH + + ++ + + + ++ E G +
Sbjct: 60 SGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYF 119
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ ILM C+ + A + + + G P +SY TL+N R L E ++L M
Sbjct: 120 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 179
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD+ Y+ ++ G C+E + DA ++ ++M G +PN V++ TL+ G C G D
Sbjct: 180 ASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 239
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+A + + M+S+ P + LI G C G + +A +++++ + G P + T+ ++
Sbjct: 240 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 299
Query: 419 PQIC 422
C
Sbjct: 300 DGCC 303
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 6/360 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY ++I + R + L L S + P T S T L + A D + F
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED-VEELFAE 275
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+E NC P + ++ + A + + HG NT NI++ C G
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFC-RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A+ N M G PD SY +++GLCR + A +LL++M+ K P+ +++
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T + LC+K + +A L+ +M GC +IV YN +V GFC +GR A ++ MP
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 452
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C PN ++Y TL+ GLC+ D A + + M+ K +P+ + L+ FC G +DEA
Sbjct: 453 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
++E++++ G P+ T+ ++ I E+ E+L+ +V + D + IG+
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 14/338 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
++G A SL+DD+L H PS+ TY L++ +S +A++ M C
Sbjct: 160 RVGEA--LSLLDDML------HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N I+ + + A + +G P+T SY +++ C
Sbjct: 212 TPNIVTYNVIINGMC-REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
LF +M E+ MP+ ++ +L++ CR V RA+ +LE M G +T ++N++
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ ++ +A++ L M GC+PD + Y TV+ G CR R DA ++L++M C PN
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V++ T + LC +G+ + A ++ M G + +AL+ GFC G+VD A LE
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LEL 447
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P+ T+ ++ +C E ++ E+L E+++
Sbjct: 448 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 11/304 (3%)
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ L DRA + + C L + L R R A + ++A + G +
Sbjct: 63 ARLVDRATSRGEAPDVYLCTKLIRNLCR--------RGRTSDAARVLRAAERSGTAVDVF 114
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ +C G + A L M V PD +Y +++GLC + +V A+ LL+DM
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G P ++YT LL ++C+ +A ++L M+ KGC P+IV YN ++ G CREGR
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA + L + S G P+ VSY T++ GLC ++ ++ M+ K P+ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
++ FC G V+ A VLE++ G A + +++ IC ++ + LN +
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351
Query: 443 KGDT 446
DT
Sbjct: 352 SPDT 355
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 130/243 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y ++R C G + A +L + M RG P V +Y +L++ +C+ + +A+
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
++L++M KG P+ ++Y ++N +CR+ ++ +A + L R+ G PD V Y TV+ G
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D ++ +M C+PN V++ LV C GM + A + ++ M G + +
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
++ + +I C G+VD+A L + G +P ++ ++ +C E E E+L E
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380
Query: 437 IVK 439
+V+
Sbjct: 381 MVR 383
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 173/373 (46%), Gaps = 14/373 (3%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLI--LILKLGRAKYF 111
++ SP + R+++LIA + D A + D A+ + + YL LI L R
Sbjct: 39 SASSPNPANARLRRLIA-RDDLAEAARLVDRATSRG---EAPDVYLCTKLIRNLCRRGRT 94
Query: 112 SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
S D + +E +F Y L+ Y D A + SM P
Sbjct: 95 S--DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYT 149
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
I+ L R + A L G P+ +Y +++ A C + A + ++M
Sbjct: 150 PIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+G P++ +Y +++ G+CR+ +V+ A + L + + GF PDT+SYTT+L LC K+ +
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
+L M K C P+ V ++ +V FCR G A +VLE M +GC N ++
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+C QG D A +++ M S G SP ++KG C + ++A +L+E+++ P
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Query: 410 HEDTWVMIVPQIC 422
+E T+ + +C
Sbjct: 389 NEVTFNTFICILC 401
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 163/339 (48%), Gaps = 13/339 (3%)
Query: 102 ILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
I K GR +DD L + Y +P +Y ++K + + A + + M+
Sbjct: 330 ICKQGR------VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
NC P N + +L + + A L + +HG N +YN ++ FC G +
Sbjct: 384 KNCPPNEVTFNTFICILC-QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A LF M P+ +Y L+ GLC +++ A +LL +ML K P+ +++ L+
Sbjct: 443 SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ C+K + EA +L+ +M GC P+++ YNT++ G ++ + +A ++L + SNG
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 559
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++G L + + A K ++ G P + + ++ C D A
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G P+E T++ ++ + + +++ ++L E+
Sbjct: 620 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N +R D++ A L ++ RG PDV L++ LCR+ + + A +L
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G D +Y TL+ CR +L A +L+ M V PD Y ++ G C GR +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGE 163
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L+DM GC P++V+Y L+ +C F A + + M +KG +P+ + +I
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G C G+VD+A L L G P ++ ++ +CA + E + E+ E+++
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 4/310 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA+ + ++L + ++ P F I I + L ++A M
Sbjct: 357 SYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 416
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C+ N ++ + A +LF S PNT +Y ++ C
Sbjct: 417 SEHGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M ++ P+V ++ +L+ C+K ++ A++L+E M+ G P+ ++Y T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL+ + + EA +LL + G +PDIV Y++++ RE R +A K+ + G
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P V Y ++ LC + D A + M+S G P+ LI+G N + E
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652
Query: 397 GVLEELLKAG 406
+L EL G
Sbjct: 653 DLLRELCSRG 662
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 127 PVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P P+ TY + N D A + ML+ +C P N +L + +
Sbjct: 452 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN-VLVSFFCQKGLMDE 510
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + +HG PN +YN ++ + + A L + + GV PD+ +Y ++
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L R+ +V A+ + + + G P + Y +L +LC++ A M GC P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ + Y T++ G E + +L ++ S G L
Sbjct: 631 NELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 84/229 (36%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F +PN TY L+ L A+ ++L + + F L+
Sbjct: 444 ALELFYSMPCKPN----TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP-----------LPKQLN--RILELL--------- 175
+ + L D A++ M+E C P + K N LELL
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 559
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + + A +F G+ P YN ++ A C + A
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
F M G MP+ +Y L++GL + + DLL ++ ++G + L
Sbjct: 620 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 668
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 8/313 (2%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ P P FTY LI+ AL F ML C P + +L+ Y
Sbjct: 152 DSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGY 211
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A L G P+ +YN+++ A C GD+ A + N + G PD +Y
Sbjct: 212 -KQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTP 270
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ LC + A LL M + PD +++ ++ SLC+K + A K+L +M G
Sbjct: 271 VLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHG 330
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLED----MPSNGCLPNLVSYRTLVGGLCDQGMF 357
C PDI+ Y++++ G C+E R +A K+L++ M S C+P+ V++ T++ LC +G+F
Sbjct: 331 CTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLF 390
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGF-CNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A K + M G P + + ++ GF C K +EA +L ++ G P T+
Sbjct: 391 DRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKS 450
Query: 417 IVPQICAGEEMEK 429
+ + +EME+
Sbjct: 451 LAFGLSREDEMER 463
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 131/243 (53%), Gaps = 4/243 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T +YN ++RA C G + A +F+ M RG P V +Y IL+ C++S +AV L
Sbjct: 158 PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVL 217
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++M +KG PD ++Y L+N++C + + EA K+L + GC PD V Y V+ C
Sbjct: 218 LDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCS 277
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R +A K+L M SN C P+ V++ ++ LC +G A K + M G +P
Sbjct: 278 SERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIIT 337
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEA----PHEDTWVMIVPQICAGEEMEKLGEVL 434
+++ G C +VDEA +L+ELL + P + T+ I+ +C ++ +V+
Sbjct: 338 YSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVV 397
Query: 435 NEI 437
+E+
Sbjct: 398 DEM 400
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 157/315 (49%), Gaps = 8/315 (2%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY + I A + D ALK S+ + CKP +L+ L + + A
Sbjct: 228 PDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERW-EEADK 286
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + P+ ++N ++ + C G + A + +M E G PD+ +Y +M GLC
Sbjct: 287 LLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLC 346
Query: 248 RKSQVNRAV----DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
++ +V+ A+ +LL +M++K +PD +++ T++ SLC+K A K++ M GC
Sbjct: 347 KERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCI 406
Query: 304 PDIVHYNTVVLGF-CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDI YN +V GF C+ + +A +L M SNG P+ +Y++L GL + + A
Sbjct: 407 PDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIG 466
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + + G SP + +A++ G C + D A ++ G P E T++++V I
Sbjct: 467 MFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIA 526
Query: 423 AGEEMEKLGEVLNEI 437
+E+ E+L +
Sbjct: 527 YEGFLEEAKELLGNL 541
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A +F G P+ +Y+I++ A C A L ++M +G PD+ +
Sbjct: 173 RGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVT 232
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y +L+ +C + V A+ +L + + G PD ++YT +L SLC ++ EA KLL +M
Sbjct: 233 YNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMF 292
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
C PD V +N V+ C++G A KVL M +GC P++++Y +++ GLC + D
Sbjct: 293 SNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVD 352
Query: 359 VA----KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A K+ + M+SK P + +I C G D A V++E+ + G P T+
Sbjct: 353 EAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412
Query: 415 VMIVPQ-ICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA---GIGLEDYL 459
IV +C + E+ ++LN +V + DT ++ G+ ED +
Sbjct: 413 NCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEM 461
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 7/240 (2%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN M+ +C G+I A + + + PD +Y L++ LC + V A+ + +DM
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G P ++Y+ LL++ C++ ++A LL M+ KGC PDIV YN ++ C +G
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDV 246
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A KVL +PS GC P+ V+Y ++ LC ++ A K + M S +P +A+
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAV 306
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNEIV 438
I C G V A VL ++ + G P T+ I+ +C E ++ L E+L E+V
Sbjct: 307 ITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMV 366
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L ++ + D +L + S F +I + RA K M
Sbjct: 267 TYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQM 326
Query: 157 LEFNCKPLPKQLNRILELLVTHRNY---LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
E C P + I++ L R ++ +L +P+ ++N ++ + C
Sbjct: 327 SEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQ 386
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQG-LCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G A + ++M E G +PD+ +Y ++ G LC+ + A+DLL M++ G PDT
Sbjct: 387 KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTT 446
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L L R+ ++ A + R++ G +PD + YN ++LG C++ R A M
Sbjct: 447 TYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
SNGC+P+ +Y LV G+ +G + AK+ +
Sbjct: 507 VSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++GL ++ +++ A+ L+ + G P + L+ LC ++ +A +++ + G
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVV---EALGP 124
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ I+ YNT+V G+CR G A ++++ +P P+ +Y L+ LC +G A
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCVRGCVLDALA 181
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+ +G SP L+ C +A +L+E+ G P T+ +++ +C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ + +VLN + K D
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDA 265
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQVSGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M++ G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 156/324 (48%), Gaps = 9/324 (2%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E + ++LE L+ + Y + + ++
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + G + +NI+M +F G+I +A ++F+ + + + P V S+ LM G +
Sbjct: 127 SLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A L M KG P+ V + T
Sbjct: 187 LDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A+ + MI KG
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA------GE 425
P LI G C G ++ A + ++K + + ++ +C E
Sbjct: 307 LXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIV 449
+M L E+LN +K EI T I+
Sbjct: 367 KM--LREMLNVGLKPEIGTYTMII 388
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M+ KG PD ++YTTL
Sbjct: 288 KKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G +P++V+
Sbjct: 408 QRDGYMPSVVT 418
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 36/335 (10%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL +F M+ N +P + + L + + Y A L GV N S N+
Sbjct: 78 DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQY-SSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C + A ++ KMF+ G+ PD ++ L+ GLC + ++ AV L +M+ G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 267 FVPDTLSYTTLLN-----------------------------------SLCRKKKLREAY 291
P+ +SY T++N SLC+ + + EA
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ L M +G PD+V YNT++ GFC G+ +A ++ ++M +P+ V++ LV GL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C +GM A+ + M KG P+ +AL+ G+C ++DEA VL ++ G AP+
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ +++ C + M + +L+E+ + + DT
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ M + +P N ++ L + ++ A LF G PN SYN
Sbjct: 148 DFAVSVMGKMFKLGIQPDAITFNTLINGLC-NEGKIKEAVGLFNEMVWSGHEPNVISYNT 206
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C NG+ +A +F KM + P+V +Y ++ LC+ VN AV+ L +M+++G
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++Y T+L+ C +L EA +L M + PD V +N +V G C+EG +A
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
V E M G PN +Y L+ G C D A K + +MI KG +P+ S + LI G+
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
C +++EA +L E+ + P T+ ++ +C
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLC 422
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 1/297 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ FR M + KP N I++ L R + A + G+ P+ +YN ++
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDR-LVNEAVEFLSEMVDRGIPPDVVTYNTIL 278
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G ++ A LF +M R VMPD ++ IL+ GLC++ V+ A + E M KG
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ +Y L++ C ++ EA K+L M KGC P++ YN ++ G+C+ R +A ++
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L +M P+ V+Y TL+ GLC G A + M S G P L+ GFC
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G +DEA +L+E+ + P+ + +++ + ++E E+ +++ I+ D
Sbjct: 459 HGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPD 515
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 5/311 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K + I + + K E P++ TY +I + L + A++ M++ P
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N IL + L A LFK V+P+T ++NI++ C G +S A +
Sbjct: 270 DVVTYNTILHGFCS-LGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCV 328
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M E+G P+ +Y LM G C +Q++ A+ +L M+ KG P+ SY L+N C+
Sbjct: 329 SETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCK 388
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
K++ EA +LL M K PD V Y+T++ G C+ GR +A + ++M S+G LP+L++
Sbjct: 389 SKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMA 448
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ G C G D A K ++ M + P+ + LI+G GK++ A + +L
Sbjct: 449 YSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLS 508
Query: 404 KAGEAPHEDTW 414
G P D W
Sbjct: 509 ADGIRP--DIW 517
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 160/333 (48%), Gaps = 3/333 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY ++ +L + A + F+ M+ N P N +++ L + A
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK-EGMVSEA 325
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ ++ + G PN +YN +M +C + + A + M +G P++ SY IL+ G
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILING 385
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++N A LL +M K PDT++Y+TL+ LC+ + REA L M G PD
Sbjct: 386 YCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPD 445
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y+ ++ GFC+ G +A K+L++M PN++ Y L+ G+ G +VAK+
Sbjct: 446 LMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFS 505
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ + G P + +IKG G DEA ++ G P ++ +I+ +
Sbjct: 506 KLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQ 565
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
+ ++++E+V D+ + + LE +
Sbjct: 566 DSSTAIQLIDEMVGKRFSADSSTFQMLLDLESH 598
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
Query: 216 DISI--AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
DISI A T F +M P V + + + +K Q + AV L M G + S
Sbjct: 74 DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
L+N LCR + A ++ +M G PD + +NT++ G C EG+ +A + +M
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+G PN++SY T++ GLC G +A + + M P+ + +I C V+
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
EA L E++ G P T+ I+ C+ ++ + + E+V + DT
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 10/318 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY----LRPAFDL 188
F I Y+++ A K F ML+ P N L ++ + ++ L A +
Sbjct: 546 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMP-----NNPLYTVLINGHFKAGNLMEALSI 600
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F+ H GVLP+ ++ + + NG + A +F+++ E+G++PDV +Y L+ G C+
Sbjct: 601 FRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 660
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ +V +A +L ++M KG P+ Y L++ LC+ ++ A KL M KG PD V
Sbjct: 661 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 720
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+T++ G+C+ +A + +MPS G P+ Y LV G C +G + A + M+
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 780
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
KGF+ S + LI G+C K+ EA + +E++ P T+ ++ C +ME
Sbjct: 781 QKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 839
Query: 429 KLGEVLNEIVKVEIKGDT 446
+ + E+ + + DT
Sbjct: 840 EANLLFKEMQERNLIVDT 857
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 4/324 (1%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
I D++++ P+ + LI + ++A + + M+ CKP + ++E
Sbjct: 355 IKDVMVSCG---IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIE 411
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
N R A +L K ++P+ SY M+ C D+S+A L KM G+
Sbjct: 412 GYCREHNMGR-ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 470
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P+V Y IL+ + ++ A LL+ M G PD Y +++ L + K+ EA
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L ++ +G PD V + +LG+ + G+ +A K ++M +G +PN Y L+ G
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A + + + G P A I G G+V EA V EL + G P T
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 414 WVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ C E+EK E+ +E+
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEM 674
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 163/338 (48%), Gaps = 26/338 (7%)
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF-----RSML--EFNCKPL 164
S++D +L ++ + +P +F LI Y + D A F S+L C L
Sbjct: 141 SILDSVLFWFRN-YGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL 199
Query: 165 PKQLNR--ILELLVTHRNYLRPA---FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
K L + ++EL N + A FD++ +Y ++ A C GD+
Sbjct: 200 LKDLLKCGMMELFWKVYNGMLDAKMGFDVY-------------TYTYLVGALCKTGDLRG 246
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + +M E+G+ P+ Y ++++G+C+ ++ AV+L M KG VP+T +YT +
Sbjct: 247 AKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITA 306
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LCR K++ EA M+ G PD + ++ GF REG + ++ + M S G
Sbjct: 307 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
NL++Y L+ GLC G + A + ++ M++ G P+ LI+G+C + A +L
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+E+ K P ++ ++ +C +++ ++L ++
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 163/395 (41%), Gaps = 58/395 (14%)
Query: 64 RVQ---KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
RVQ K+ + + L ++F Y+S F K F L D++ +
Sbjct: 628 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV----------EKAFELHDEMCLK 677
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ P++F Y L+ +S RA K F M E +P + +++
Sbjct: 678 ------GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N + AF LF GV P++ YN ++ C GD+ A LF +M ++G + S
Sbjct: 732 EN-VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-S 789
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA-------- 290
+ L+ G C+ ++ A L ++M+ K +PD ++YTT+++ C+ K+ EA
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 849
Query: 291 ---------------------------YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ L +M KG PD V Y V+ C+E +
Sbjct: 850 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 909
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A K+ +++ G L + L+ LC + A K + M G P + + L+
Sbjct: 910 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ F GK+DEA V E + G P T + +V
Sbjct: 970 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 1004
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 133/262 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L +S + G++PNT +Y I+ C ++ A F +M + G+ PD + L+
Sbjct: 282 AVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALID 341
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G R+ ++ + + + M++ G + ++Y L++ LC+ K+ +A ++L M GC P
Sbjct: 342 GFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP 401
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + ++ G+CRE A ++L++M +P+ VSY ++ GLC +A K +
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M G P+ V LI + + G+++EA +L+ + +G AP + I+ +
Sbjct: 462 EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 521
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
+ME+ L EI +K D
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDA 543
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 157/370 (42%), Gaps = 37/370 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L + +LI + + +++ +I+ + D A++ RSM
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E P I L + + A F+ K G+ P+ + + ++ F GD
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKR-MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGL------------------------------ 246
I + + M G+ ++ +Y +L+ GL
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408
Query: 247 -----CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
CR+ + RA++LL++M + VP +SY ++N LC K L A KLL +M G
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V Y+ +++ + EGR +A ++L+ M +G P++ Y ++ L G + A
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQ 420
Y+ + +G P A I G+ GK+ EA +E+L G P+ + V+I
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 421 ICAGEEMEKL 430
AG ME L
Sbjct: 589 FKAGNLMEAL 598
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 11/335 (3%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL--KTFRSMLEFNCK 162
+GRA L+D++ E + PS +Y I + D +L K M K
Sbjct: 419 MGRA--LELLDEM------EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 470
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P + IL + + A L GV P+ YN ++ G + A T
Sbjct: 471 P-NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
++ RG+ PD ++ + G + ++ A ++ML+ G +P+ YT L+N
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+ L EA + R+ G PD+ + + G + GR +A KV ++ G +P++
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y +L+ G C QG + A + M KG +P+ + +AL+ G C G + A + + +
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ G P T+ ++ C E + + + +E+
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML+ D +YT L+ +LC+ LR A ++L M KG NP+ Y+ V+ G C+ G
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ M G +PN +Y + GLC + AK + M G P ++ A
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI GF G +DE + + ++ G + T+ +++ +C +MEK E+L +V +
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 442 IKGDTR 447
K ++R
Sbjct: 399 CKPNSR 404
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 154/301 (51%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFTY ++ + D AL + M + + N I++ L ++ ++ AFD
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYK-HMDDAFD 277
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +YN ++ C G S A L + M ER + P+V ++ L+
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + P+ ++Y +L+N C +L EA ++ M K C PD+V
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R + ++ +M G + N V+Y TL+ GL G D+A+K + M
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C GK+++A V E L K+ P+ T+ +++ +C ++
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517
Query: 428 E 428
E
Sbjct: 518 E 518
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H++ TY IL+ R L +L + Y + L+ Y A+
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E KP N ++ L H N A L G P+ +Y ++ C
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A +L KM + + +V Y ++ GLC+ ++ A DL M KG PD
Sbjct: 233 KRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L++ LC + +A +LL M + NP++V +N+++ F +EG+ I+A K+ ++M
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
PN+V+Y +L+ G C D A++ LM+SK P + LIKGFC +V
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+E + E+ + G + T+ ++ + + + ++ ++V
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 165/336 (49%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ + + +TY I + S LP AL M++ +P L+
Sbjct: 98 DVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLP-LALAVLGKMMKLGYEPDIVTLSS 156
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L + G P+T ++N ++ + S A L ++M R
Sbjct: 157 LLNGYC-HGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVAR 215
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y ++ GLC++ ++ A+ LL+ M + + Y T+++ LC+ K + +A
Sbjct: 216 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDA 275
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+ L +M+ KG PD+ YN+++ C GR DA ++L DM PN+V++ +L+
Sbjct: 276 FDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDA 335
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K MI + P+ ++LI GFC ++DEA + ++ P
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ E+ E+ + + G+T
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 3/352 (0%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G KY + D + K E + P +FTY LI A + M+E P
Sbjct: 265 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N +++ L A LF + + PN +YN ++ FC + + A +
Sbjct: 325 NVVTFNSLIDAF-AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F M + +PDV +Y L++G C+ +V ++L +M +G V +T++Y TL+ L +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
A K+ +M G PDI+ Y+ ++ G C+ G+ A V E + + PN+ +
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C G + + KG P+ + +I GFC G +EA + E+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
+ G P + ++ + E++ E+ GD + I +
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 615
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI +A+ A K F M++ + P N ++ H + L A
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH-DRLDEA 380
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F LP+ +YN +++ FC + LF +M +RG++ + +Y L+QG
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + A + + M++ G PD ++Y+ LL+ LC+ KL +A + ++ P+
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C+ G+ D + + G PN++ Y T++ G C +G+ + A +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 560
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P + LI+ G + +++E+ G T M++ + G
Sbjct: 561 EMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 619
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 129/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF K P+ ++ ++ A + +L +M G+ + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ PD ++ ++LLN C K++ EA L+ +M G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V +NT++ G +A +A +++ M + GC P+L +Y T+V GLC +G D+A
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + + + +I G C +D+A + ++ G P T+ ++ +
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 302 CNYGRWSDASRLLSDMIERKI 322
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF +M + P + + L+ + + ++ + + L E M N G + +Y+ LLN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR+ +L A +L +M G PDIV ++++ G+C R +A +++ M G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ V++ TL+ GL A + M+++G P ++ G C G +D A +L
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+++ K + + I+ +C + M+ ++ N K+E KG
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFN---KMETKG 286
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ AV L +M+ P + ++ LL+++ + K L +M+ G + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR + A VL M G P++V+ +L+ G C A + M+
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G+ P + LI G K EA +++ ++ G P T+ +V +C +++
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 431 GEVLNEIVKVEIKGDTRI 448
+L ++ K +I+ + I
Sbjct: 241 LSLLKKMEKGKIEANVVI 258
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 162/339 (47%), Gaps = 4/339 (1%)
Query: 111 FSLIDDILITLK---SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
F+ +DD L + H P + F L+ A++ M F P
Sbjct: 47 FNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 106
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN ++ H N L AF + K G P+T ++ ++R C G I A LF+KM
Sbjct: 107 LNILINSFC-HLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM 165
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G P+V +Y L+ GLC+ N A+ LL M PD + YT++++SLC+ +++
Sbjct: 166 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 225
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA+ L +M +G +PDI Y +++ C +L M ++ +P++V + T+
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V LC +G A + +MI +G P+ +AL+ G C ++DEA V + ++ G
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 345
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
AP+ ++ ++ C + M+K + E+ + E+ +T
Sbjct: 346 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 155/320 (48%), Gaps = 4/320 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + + A++ RSM + NC+P I++ L R + AF+
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ-VTEAFN 230
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +Y ++ + C + TL N+M +MPDV + ++ LC
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 290
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A D+++ M+ +G P+ ++Y L++ C + ++ EA K+ M G P+++
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 350
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G+C+ R A + E+M +PN V+Y TL+ C G A M
Sbjct: 351 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEM 409
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
++ G P + L+ C +DEA +L+ + + P + +++ +C E+
Sbjct: 410 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 469
Query: 428 EKLGEVLNEIVKVEIKGDTR 447
E ++ + + ++ + R
Sbjct: 470 EAARDIFSNLSSKGLRPNVR 489
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 37/348 (10%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
++P +FTY I++ NL + T N K +P + + +++ L + A
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC-KEGKITEA 298
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ GV PN +YN +M C ++ A +F+ M G P+V SY L+ G
Sbjct: 299 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 358
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL---------------------------- 277
C+ ++++A L E+M K +P+T++Y TL
Sbjct: 359 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDL 418
Query: 278 ------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
L+ LC+K L EA LL ++ +PDI Y V+ G CR G A + +
Sbjct: 419 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 478
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ S G PN+ +Y ++ GLC +G+ D A K M G SP + + +G +
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 538
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A +L+E+L G + T ++V +C + + + ++L+E V+
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P++ +Y LI Y + D+A F M + P N ++ H L
Sbjct: 342 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH--XCHVGRL 399
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A LF HG +P+ +Y I++ C + A L + + PD++ Y I+
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G+CR ++ A D+ ++ +KG P+ +YT ++N LCR+ L EA KL M GC
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+PD YNT+ G + A+ A ++L++M + G ++ + LV LCD + K+
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 579
Query: 363 YM 364
+
Sbjct: 580 IL 581
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + FN+M P + L+ + + Q L M + G PD + L+N
Sbjct: 53 ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 112
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
S C +L A+ +L ++ G PD + T++ G C EG+ DA + + M G P
Sbjct: 113 SFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 172
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V+Y TL+ GLC G + A + ++ M P V ++I C +V EA +
Sbjct: 173 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 232
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+++ G +P T+ ++ +C E + + +LN+++ +I D I
Sbjct: 233 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 281
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 6/360 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY ++I + R + L L S + P T S T L + A D + F
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED-VEELFAE 275
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+E NC P + ++ + A + + HG NT NI++ C G
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFC-RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A+ N M G PD SY +++GLCR + A +LL++M+ K P+ +++
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T + LC+K + +A L+ +M GC +IV YN +V GFC +GR A ++ MP
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 452
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C PN ++Y TL+ GLC+ D A + + M+ K +P+ + L+ FC G +DEA
Sbjct: 453 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
++E++++ G P+ T+ ++ I E+ E+L+ +V + D + IG+
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 14/338 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
++G A SL+DD+L H PS+ TY L++ +S +A++ M C
Sbjct: 160 RVGEA--LSLLDDML------HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N I+ + + A + +G P+T SY +++ C
Sbjct: 212 TPNIVTYNVIINGMC-REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVE 270
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
LF +M E+ MP+ ++ +L++ CR V RA+ +LE M G +T ++N++
Sbjct: 271 ELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ ++ +A++ L M GC+PD + Y TV+ G CR R DA ++L++M C PN
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V++ T + LC +G+ + A ++ M G + +AL+ GFC G+VD A LE
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LEL 447
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P+ T+ ++ +C E ++ E+L E+++
Sbjct: 448 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 11/304 (3%)
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ L DRA + + C L + L R R A + ++A + G +
Sbjct: 63 ARLVDRATSRGEAPDVYLCTKLIRNLCR--------RGRTSDAARVLRAAERSGTAVDVF 114
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ +C G + A L M V PD +Y +++GLC + +V A+ LL+DM
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L++G P ++YT LL ++C+ +A ++L M+ KGC P+IV YN ++ G CREGR
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA + L + S G P+ VSY T++ GLC ++ ++ M+ K P+ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
++ FC G V+ A VLE++ G A + +++ IC ++ + LN +
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351
Query: 443 KGDT 446
DT
Sbjct: 352 SPDT 355
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 130/243 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y ++R C G + A +L + M RG P V +Y +L++ +C+ + +A+
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
++L++M KG P+ ++Y ++N +CR+ ++ +A + L R+ G PD V Y TV+ G
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D ++ +M C+PN V++ LV C GM + A + ++ M G + +
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
++ + +I C G+VD+A L + G +P ++ ++ +C E E E+L E
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380
Query: 437 IVK 439
+V+
Sbjct: 381 MVR 383
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 173/373 (46%), Gaps = 14/373 (3%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLI--LILKLGRAKYF 111
++ SP + R+++LIA + D A + D A+ + + YL LI L R
Sbjct: 39 SASSPNPANARLRRLIA-RDDLAEAARLVDRATSRG---EAPDVYLCTKLIRNLCRRGRT 94
Query: 112 SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
S D + +E +F Y L+ Y D A + SM P
Sbjct: 95 S--DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYT 149
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
I+ L R + A L G P+ +Y +++ A C + A + ++M
Sbjct: 150 PIIRGLC-DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+G P++ +Y +++ G+CR+ +V+ A + L + + GF PDT+SYTT+L LC K+ +
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
+L M K C P+ V ++ +V FCR G A +VLE M +GC N ++
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+C QG D A +++ M S G SP ++KG C + ++A +L+E+++ P
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388
Query: 410 HEDTWVMIVPQIC 422
+E T+ + +C
Sbjct: 389 NEVTFNTFICILC 401
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 162/339 (47%), Gaps = 13/339 (3%)
Query: 102 ILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
I K GR +DD L + Y +P +Y ++K + + A + + M+
Sbjct: 330 ICKQGR------VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
NC P N + +L + + A L + +HG N +YN ++ FC G +
Sbjct: 384 KNCPPNEVTFNTFICILC-QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A LF M P+ +Y L+ GLC +++ A +LL +ML K P+ +++ L+
Sbjct: 443 SALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ C+K + EA +L+ +M GC P+++ YNT++ G + + +A ++L + SNG
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVS 559
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++G L + + A K ++ G P + + ++ C D A
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G P+E T++ ++ + + +++ ++L E+
Sbjct: 620 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N +R D++ A L ++ RG PDV L++ LCR+ + + A +L
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G D +Y TL+ CR +L A +L+ M V PD Y ++ G C GR +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGE 163
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L+DM GC P++V+Y L+ +C F A + + M +KG +P+ + +I
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G C G+VD+A L L G P ++ ++ +CA + E + E+ E+++
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 4/310 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA+ + ++L + ++ P F I I + L ++A M
Sbjct: 357 SYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 416
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C+ N ++ + A +LF S PNT +Y ++ C
Sbjct: 417 SEHGCEVNIVTYNALVNGFCVQ-GRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M ++ P+V ++ +L+ C+K ++ A++L+E M+ G P+ ++Y T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL+ + EA +LL + G +PDIV Y++++ RE R +A K+ + G
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P V Y ++ LC + D A + M+S G P+ LI+G N + E
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652
Query: 397 GVLEELLKAG 406
+L EL G
Sbjct: 653 DLLRELCSRG 662
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 127 PVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P P+ TY + N D A + ML+ +C P N +L + +
Sbjct: 452 PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN-VLVSFFCQKGLMDE 510
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + +HG PN +YN ++ + + A L + + GV PD+ +Y ++
Sbjct: 511 AIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIG 570
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L R+ +V A+ + + + G P + Y +L +LC++ A M GC P
Sbjct: 571 VLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMP 630
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ + Y T++ G E + +L ++ S G L
Sbjct: 631 NELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F +PN TY L+ L A+ ++L + + F L+
Sbjct: 444 ALELFYSMPCKPN----TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL-------------ELL--------- 175
+ + L D A++ M+E C P N +L ELL
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVS 559
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + + A +F G+ P YN ++ A C + A
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
F M G MP+ +Y L++GL + + DLL ++ ++G + L
Sbjct: 620 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 668
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 158/314 (50%), Gaps = 13/314 (4%)
Query: 123 SEHYPVTPSLFTYLIKIYAESN-LPDRAL--KTFRSMLEFNCKPLPKQLNRILELLVTHR 179
S ++P + LF LI +S LPD L + +SM EF C P + N +++ L +
Sbjct: 294 SRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAK 353
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A +L +G+ P+ +Y+ ++ C G + A L +M + GV PD +
Sbjct: 354 Q-LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ L + +V+ A+ LE M +G PD ++Y TLL+ LC+ ++ EA L +M
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
C PD+ Y ++ CR G+A A + ++M G LP+ V Y +L+ GL G+ D+
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + ++ + K P F + ++ G C GK ++AC V+E + AG T++ +V
Sbjct: 533 ALELLKTSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV- 588
Query: 420 QICAGEEMEKLGEV 433
+ KLG+V
Sbjct: 589 -----RGLRKLGKV 597
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 188/428 (43%), Gaps = 72/428 (16%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIK 138
+FD+ RQ ++HS TY + L +A L + ++ YP P FTY +++
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP--PDDFTYSIVLR 81
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKS-AH 193
++ D+A + + E K LN I +V + + A ++FK+ +
Sbjct: 82 GLCKAGELDKAKELLGQLRESGVK-----LNVITYSVVIDGCCKASRVDDALEIFKTMSA 136
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G +P+ ++N +++ C +S A+ LF M + G P+V SY L+ GLC+ +++
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L E+M+ K VPD ++YT+ + LC+ ++ EA +M KG D V ++TV+
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256
Query: 314 LGFCREGRA-----------------IDACKVLEDMPSNG-------------------- 336
C++G A +ACK E+M S
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKR 316
Query: 337 ------------------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
C PNL +Y +V LC D A++ + M + G SP
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
AL+ G C +GK+D AC +LEE+ K G P T I+ + + K+ L+ +
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL---SKAGKVDYALSHLE 433
Query: 439 KVEIKGDT 446
++ +G T
Sbjct: 434 TMKARGST 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 9/265 (3%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
++ N M+ C +G + A F +M R P E + L+ +C+ ++ V L +
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 262 M--LNKGFVPDTL-SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
M + + + P L +Y ++++LC+ K+L EA +L+ M G +PD+V Y+ +V G C+
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G+ AC +LE+M G P+ + +++ L G D A +++ M ++G +P
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ L+ G C G++DEA L +++ A P ++ +I+ +C + + E+V
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 439 KVEIKGDTRIVEAGI------GLED 457
K + DT + + + GLED
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLED 531
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 12/284 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY I++ L +AK +++ + +Y ++P + TY L+ + DRA
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMA--NYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + P IL L + + A ++ G P+ +YN ++ C
Sbjct: 399 EMSKEGVFPDSFTDASILNAL-SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G I A T KM PDV SY I++ LCR Q A + ++M+ +G +PDT+ Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+LL+ L R A +LL K C PD V + VV G C+ G+A DAC+V+E M
Sbjct: 518 HSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMAD 574
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G + +Y +V GL G D A++ ++ H SV
Sbjct: 575 AGFPADAFTYINVVRGLRKLGKVDKARQ----LVDDASETHTSV 614
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 215 GDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G IS LF+ + ++G V +Y + L + + A + + M +G+ PD +
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ +L LC+ +L +A +LL +++ G +++ Y+ V+ G C+ R DA ++ + M
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 334 S-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ GC+P++V++ +L+ GLC A + M G P+ L+ G C G++
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAG 452
DEAC + EE+++ P + V +C + + + ++V K D
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255
Query: 453 IGL 455
IG+
Sbjct: 256 IGI 258
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 7/346 (2%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTF 153
N TY +L+ A D+L ++ + TPS++ + + +S A++
Sbjct: 18 NYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVV 77
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
++M + CKP N ++ L L A + + G N +YN ++
Sbjct: 78 KNMKDGACKPDVVTFNTLIAGLC-KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTL 272
G A + M PD ++Y ++ G C+ +++RA LE+M + G PDT
Sbjct: 137 AGRSGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y+ L+N LC+ LR+A +LL M K C +V +NT+V G+C+ A ++L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M +GC P++V+Y T++ GLC G D ++ M+S+G P L+ G C GK
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ EAC +++ +L+ G P+ T+ ++ +C ++++ ++L I
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 11/275 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+++ D R F + TY LI L A + +L+ + TP TY
Sbjct: 108 AQQVLDEMERS-GFAANLVTYNTLINGLSSAGRSG--EAVLVM---QGMTTTPDTQTYNA 161
Query: 136 LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA-H 193
+I + +S DRA M + C P + ++ L N LR A +L +
Sbjct: 162 IIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN-LRKADELLQEMIG 220
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ + ++N ++ +C D+ A L + M E G PDV +Y ++ GLCR V+
Sbjct: 221 RKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVD 280
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+ LLE M+++G PD ++YT L+ LC+ K+ EA +L+ RM GC P+ V Y+ V
Sbjct: 281 KGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVF 340
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
G C+ + A +L + G + ++V++ TL+
Sbjct: 341 DGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 129 TPSLFTYLIKIYA---ESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRP 184
+P FTY I I SNL +A + + M+ +C N +++ ++ R
Sbjct: 189 SPDTFTYSILINGLCKSSNLR-KADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR- 246
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L S +HG P+ +Y+ ++ C GD+ + L KM RG PDV +Y +L+
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ A L++ ML G P+ ++Y+ + + LC+ KL A LL ++ KG
Sbjct: 307 GLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVT 366
Query: 305 DIVHYNTVVL 314
D+V + T++L
Sbjct: 367 DVVAFETLLL 376
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITL-KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY ILI L ++ D++L + + + F L+ Y ++ DRA + S
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
MLE C P + I++ L + + F L + G P+ +Y +++ C G
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGD-VDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L +M E G P+ +Y ++ GLC+ +++ A DLL + +KG V D +++
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFE 372
Query: 276 TLLNSLCRKKKLREAYK 292
TLL S+ ++ R A++
Sbjct: 373 TLLLSVKKRLLDRAAFQ 389
>gi|255561325|ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 171/322 (53%), Gaps = 8/322 (2%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
++ S DP ++D + + +++ + + Y ++I KL +AK F I+DI+ +K E
Sbjct: 2 RIFESIKDPNSVFSVWDQYTNRKDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEKS 61
Query: 127 -PVTPSLFTYLIKIYAESNLPDR---ALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNY 181
++ F +IKIY +L R A+ T M +NC P K N +L LLV+ R +
Sbjct: 62 CRLSNGFFYNVIKIYG--HLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIF 119
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++++ A GV + NI+++ C NGD+ A+ + ++ ++ P+V ++
Sbjct: 120 -DVVHEIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFST 178
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM LC K +VN+A LL+ M N+G DT+++ L++ L ++ ++ E +LL +MK+KG
Sbjct: 179 LMHYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKG 238
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P+ Y V+ G G+ +A ++ M G P+ VSY+ L+ GLC + +
Sbjct: 239 CEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVD 298
Query: 362 KYMQLMISKGFSPHFSVSHALI 383
++ M+ +GF P + ++
Sbjct: 299 CVLKQMLKQGFVPKMGMWKHIV 320
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAY-TLFNKMFERGVMPDVESY----------------- 239
L N YN++ G I +A TLF+ PDV+++
Sbjct: 64 LSNGFFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVH 123
Query: 240 ------------------RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
IL++GLC + A +L++ + P+ +++TL++ L
Sbjct: 124 EIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYL 183
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C K ++ +A+ LL RM+ +G D + +N ++ G + GR + ++L M GC PN
Sbjct: 184 CAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCEPNA 243
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
SY+ ++ GL D G F AK +M M+ +G P F LI G C + E VL++
Sbjct: 244 GSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVDCVLKQ 303
Query: 402 LLKAGEAPHEDTWVMIV 418
+LK G P W IV
Sbjct: 304 MLKQGFVPKMGMWKHIV 320
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVVLGFCREGRA 322
K + P+ YT ++N L + K ++ R+K+ K C + YN + + GR
Sbjct: 24 KDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEKSCRLSNGFFYNVIKIYGHLAGRI 83
Query: 323 IDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A L DMP C P++ ++ ++ L +FDV + + G +
Sbjct: 84 KVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVHEIYEKAPILGVEIDACCLNI 143
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LIKG C G ++ A VL+E K P+ T+ ++ +CA E+ + +L+ +
Sbjct: 144 LIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMENEG 203
Query: 442 IKGDT 446
I+ DT
Sbjct: 204 IEVDT 208
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + +L G PN SY ++ G S A ++M G P S
Sbjct: 221 RGRIEEGMELLVKMKLKGCEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVS 280
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
Y+ L+ GLC++ + +L+ ML +GFVP + ++ S+
Sbjct: 281 YKKLIDGLCKEKLIGEVDCVLKQMLKQGFVPKMGMWKHIVGSM 323
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 173/344 (50%), Gaps = 5/344 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR--ALKTFR 154
T I++ +A F +D ++ + E V P + T+ + + A D A+
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEM--EKRCVFPDVVTHNVMVDARFRAGDAEAAMALVD 154
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
SM+ KP N +L+ L + + A+++FK GV P+ +S+ I++ FC
Sbjct: 155 SMVSKGLKPGIVTYNSVLKGLCRSGMWDK-AWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G+I A ++ +M RG+ PD+ S+ L+ R+ +++ A+ L +M G VPD + Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T ++ CR + +A ++ M GC PD+V YNT++ G C+E R +DA +L +M
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P+L ++ TL+ G C +G D A + M+++ P + LI G C G +D+
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
A + +++ P+ T+ +++ C ++E L+E++
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T +I + + L AL+ M+ C P N +L L R L A L
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL-DAEGLLNE 330
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ +C G + A LF+ M + + PD+ +Y L+ G+CR+
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+++A DL +DM ++ P+ ++Y+ L++S C K ++ +A+ L M KG P+I+ YN+
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G K L+ M N P+L++Y TL+ G + A K + +M +
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-MIVPQICAGEEME 428
P + LI GF G V EA + E++ G P T++ MI + AG E
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 568
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 137/258 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L S G+ P +YN +++ C +G A+ +F +M + GV PDV S+ IL+
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR ++ A+ + ++M ++G PD +S++ L+ R+ K+ A L M+ G P
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y V+ GFCR G DA +V ++M GCLP++V+Y TL+ GLC + A+ +
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G P LI G+C GK+D+A + + +L P T+ ++ +C
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388
Query: 425 EEMEKLGEVLNEIVKVEI 442
+++K ++ +++ EI
Sbjct: 389 GDLDKANDLWDDMHSREI 406
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Query: 124 EHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ + V P + FT LI + + ALK ++ M KP + ++ L R
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF-ARRGK 250
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + G++P+ Y +++ FC G +S A + ++M G +PDV +Y
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ ++ A LL +M +G PD ++TTL++ C + KL +A +L M +
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YNT++ G CR+G A + +DM S PN V+Y L+ C++G + A
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 430
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ MI+KG P+ +++IKG+C G V + L++++ +P T+ ++
Sbjct: 431 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 490
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
++M ++LN + K +++ D
Sbjct: 491 IKEDKMHDAFKLLNMMEKEKVQPDV 515
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 157/327 (48%), Gaps = 11/327 (3%)
Query: 125 HYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----H 178
H + P L F+ LI ++A D A+ R M F P + ++ +V
Sbjct: 228 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP-----DGVIYTMVIGGFCR 282
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ A + G LP+ +YN ++ C + A L N+M ERGV PD+ +
Sbjct: 283 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 342
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C + ++++A+ L + MLN+ PD ++Y TL++ +CR+ L +A L M
Sbjct: 343 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 402
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ P+ V Y+ ++ C +G+ DA L++M + G LPN+++Y +++ G C G
Sbjct: 403 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 462
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+K++Q M+ SP + LI G+ K+ +A +L + K P T+ M++
Sbjct: 463 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++ G + ++ I+ D
Sbjct: 523 NGFSVHGNVQEAGWIFEKMCAKGIEPD 549
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF + + P+ +YN ++ C GD+ A L++ M R + P+ +Y I
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C K QV A L++M+NKG +P+ ++Y +++ CR + + K L +M V
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G+ +E + DA K+L M P++V+Y L+ G G A
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ M +KG P ++I G G EA + +E+L+ G+
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 125/309 (40%), Gaps = 36/309 (11%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P +F LI+ Y +S P A + FR +L+ P+P + L ++ + A D +
Sbjct: 25 PRVFDLLIRTYTQSRKPREAFEAFRLILDHRV-PIPAAASNALLAALSRAGWPHLAADAY 83
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ NT + NIM+ +C +
Sbjct: 84 RLVFSSNSEVNTYTLNIMVHNYC-----------------------------------KA 108
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ ++ ++ +M + PD +++ ++++ R A L+ M KG P IV Y
Sbjct: 109 LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTY 168
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N+V+ G CR G A +V ++M G P++ S+ L+GG C G + A K + M
Sbjct: 169 NSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 228
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+G P LI F GK+D A L E+ G P + M++ C M
Sbjct: 229 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSD 288
Query: 430 LGEVLNEIV 438
V +E+V
Sbjct: 289 ALRVRDEMV 297
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L + + + +L ++ P FT LI Y D+AL+ F +M
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366
Query: 157 LEFNCKPLPKQLNRIL----------------------ELLVTHRNY------------L 182
L +P N ++ E+ H Y +
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
AF G+LPN +YN +++ +C +G++S KM V PD+ +Y L
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G ++ +++ A LL M + PD ++Y L+N ++EA + +M KG
Sbjct: 487 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
PD Y +++ G G + +A ++ ++M G
Sbjct: 547 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 289 EAYKLLCRMKVKGCNPDIVHY--NTVVLGFCR--EGRAIDACKVLEDMPSNGCLPNLVSY 344
+AY+L V N ++ Y N +V +C+ E +DA V+ +M P++V++
Sbjct: 81 DAYRL-----VFSSNSEVNTYTLNIMVHNYCKALEFDKVDA--VISEMEKRCVFPDVVTH 133
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+V G + A + M+SKG P ++++KG C G D+A V +E+
Sbjct: 134 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 193
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
G AP ++ +++ C E+E+ ++ E+ IK D IGL
Sbjct: 194 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 244
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 166/356 (46%), Gaps = 6/356 (1%)
Query: 96 STYLILILKLGRAKY--FSLIDDILITL-KSEHYPVTPSL--FTYLIKIYAESNLPDRAL 150
S +L L+ R+KY F+ +DD L + + H PS+ F ++ + L
Sbjct: 35 SPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVL 94
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
R M F LN ++ H N + AF + K G P+T S+ +++
Sbjct: 95 SLSRKMDSFGIPHNVYTLNVLINSFC-HLNRVNFAFSVLAKILKLGCQPDTASFTTLIKG 153
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G I A LF+KM G PDV Y L+ GLC+ + A+ LL M PD
Sbjct: 154 LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPD 213
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+ Y TL++SLC+ ++ +A+ L M KG +P+IV N++V C G +L
Sbjct: 214 VVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLN 273
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + +PN +S T+V LC +GM A + +M G P ALI G C
Sbjct: 274 EMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRS 333
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++DEA V + ++ G AP+ ++ ++ C E M+K + E+ + ++ +T
Sbjct: 334 EMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 1/306 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ LI ++ A++ RSM + NC+P ++ L R + AF+LF
Sbjct: 181 IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ-AFNLFSE 239
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ PN + N ++ A C G+ TL N+M + +MP+ S ++ LC++
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V +A D+++ M G PD ++YT L++ C + ++ EA K+ M KGC P++ YNT
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C+ R A + E+M +PN V+Y TL+ GLC G A + M++ G
Sbjct: 360 LINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACG 419
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P L+ C +D+A +L+ + + P + +++ +C E+E
Sbjct: 420 QIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDAR 479
Query: 432 EVLNEI 437
++ + +
Sbjct: 480 DLFSNL 485
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 161/345 (46%), Gaps = 6/345 (1%)
Query: 105 LGRAKY-FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
L R + FS++ IL K P T S FT LIK AL F M+ +P
Sbjct: 122 LNRVNFAFSVLAKIL---KLGCQPDTAS-FTTLIKGLCLEGQIGEALHLFDKMIWEGFQP 177
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ L + A L +S K P+ Y ++ + C + + A+ L
Sbjct: 178 DVVIYATLINGLCK-TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNL 236
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F++M +G+ P++ + L+ LC + LL +M++ +P+ +S TT++++LC+
Sbjct: 237 FSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCK 296
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ + +A+ ++ M G PD+V Y ++ G C +A KV + M GC PN+ S
Sbjct: 297 EGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFS 356
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ G C D A + M + P+ + LI G C+VG++ +A + E++
Sbjct: 357 YNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMV 416
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
G+ P T+ +++ +C ++K +L I + D +I
Sbjct: 417 ACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQI 461
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 146/312 (46%), Gaps = 9/312 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY LI + + D A+K F M+ C P N ++ + A
Sbjct: 315 VEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER-MDKA 373
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ + ++PNT +YN ++ C G + A LF +M G +PD+ +YRIL+
Sbjct: 374 MYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDY 433
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +++A+ LL+ + PD YT +++ +CR +L +A L + KG P+
Sbjct: 434 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN + G C+ G +A K+ +M N C + +Y T+ G A + ++
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+++GFS S + L+ + G LE++ +DT C +
Sbjct: 554 EMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDT------VFCKED 607
Query: 426 EMEKLGEVLNEI 437
++ LG+V++++
Sbjct: 608 DINALGKVISDL 619
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 38/328 (11%)
Query: 128 VTPSLFTYLIKIYAESNLPD-RALKTF-RSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ T +YA NL + + + T M++ P L +++ L + A
Sbjct: 245 ISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCK-EGMVAQA 303
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ + GV P+ +Y ++ C ++ A +F+ M +G P+V SY L+ G
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA--------------- 290
C+ ++++A+ L E+M + +P+T++Y TL++ LC +L++A
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423
Query: 291 ---YKLLCRMKVKGC-----------------NPDIVHYNTVVLGFCREGRAIDACKVLE 330
Y++L K C +PDI Y V+ G CR G DA +
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFS 483
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
++ S G PN+ +Y + GLC +G+ D A K M S + + +GF
Sbjct: 484 NLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ A +LEE+L G + T ++V
Sbjct: 544 ETSRAIQLLEEMLARGFSCDVSTTTLLV 571
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++M++ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + MI G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 172/347 (49%), Gaps = 1/347 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LIL R K + I +++ ++ +T LI + E+ D ALK F M
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E NC P + I+ + A ++FK + PN +Y +++ + C + +
Sbjct: 301 HEDNCWPTVRTYTVII-FALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A + N M E+G++P V +Y L+ G C+K A+++L M + P+ +Y
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ CR K + +A LL +M + P++V YN ++ G C+EG A K+L M +G
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+P+ +Y + LC +G+ + A+ + + KG + + LI G+C VGKV +
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+L+++L AG P+ T+ ++ C + ++ +++ ++K +I+
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIE 586
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 188/403 (46%), Gaps = 15/403 (3%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P Q+ S+ N I +P + L A DP A F++ ++ F+H+ +++ +
Sbjct: 58 SRPNWQKHPSLKNLIPSI-APSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSM 116
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
+ L Y + +++ I + +LF ++++ N R + F+ L C
Sbjct: 117 LNILVPNGYLRIAENMRILMIKSTDSSENALF--VLEMLRSMN---RRVDAFKFKLTLRC 171
Query: 162 -KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
L L+R L + YL D+ V PN + N M+ +C G++ A
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDM--------VTPNIFTLNTMVNGYCKLGNVVEA 223
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+K+ + G+ D +Y L+ G CR V+ A + M NKG + + +SYT L++
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C +++ EA KL +M C P + Y ++ C+ GR +A + ++M C PN
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ +Y L+ LC+ FD AKK + M+ KG P +ALI G+C G A +L
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILS 403
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ +P+ T+ ++ C G+ + K +L+++++ +++
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 164/348 (47%), Gaps = 4/348 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++I L + + ++ + +H +T LI E + D A K M
Sbjct: 311 TYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM 370
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE P N +++ + A ++ + PN ++YN ++ FC +
Sbjct: 371 LEKGLIPSVVTYNALIDGYCK-KGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A +L +KM ER + P+V +Y IL+ G C++ + A LL M G VPD +Y+
Sbjct: 430 IHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSV 489
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++LC++ + EA L +K KG + V Y+T++ G+C+ G+ D +L+ M S G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C+PN ++Y +L+ G C + F A+ + +MI + P LI + D+A
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+ +++L G P + + C+ + K EVL I K+ KG
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRL-KDAEVL--ICKMNAKG 654
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 154/371 (41%), Gaps = 44/371 (11%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN TY +LI L F IL + + + PS+ TY LI Y + L
Sbjct: 341 QPNVH----TYTVLICSLCEDSNFDDAKKILNGMLEK--GLIPSVVTYNALIDGYCKKGL 394
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
AL+ M NC P + N ++ +N + A L + + PN +YN
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKN-IHKAMSLLHKMLERKLQPNVVTYN 453
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA---------- 255
I++ C GD+ AY L + M E G++PD +Y + + LC++ V A
Sbjct: 454 ILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK 513
Query: 256 ------------VD-------------LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
+D LL+ ML+ G VP++++Y +L++ C++K +EA
Sbjct: 514 GIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA 573
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L+ M + P Y ++ ++ A + + M S G P++ Y +
Sbjct: 574 RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHA 633
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C G A+ + M +KG P + I + G +D A G+L+ + + G P
Sbjct: 634 YCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPS 693
Query: 411 EDTWVMIVPQI 421
T+ ++ +
Sbjct: 694 YYTYSCLIKHL 704
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 150/386 (38%), Gaps = 30/386 (7%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY + I L + + +LK + +++ LI Y + M
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM 545
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L C P N +++ +N+ + A L K + P +Y I++ + +
Sbjct: 546 LSAGCVPNSITYNSLIDGYCKEKNF-KEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A+ +F++M G PDV Y + C ++ A L+ M KG +PDT+ YT
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTL 664
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL---------------------- 314
+++ R + A+ +L RM GC P Y+ ++
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSG 724
Query: 315 ----GFCREGRAID---ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
F R +D + M +GC PN +Y + GLC G +VA + M
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
KG SP+ + ++L+ C +G EA L+ +++ PH D+ +++ +
Sbjct: 785 KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGND 844
Query: 428 EKLGEVLNEIVKVEIKGDTRIVEAGI 453
EK V ++ E D + + I
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLI 870
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 36/364 (9%)
Query: 97 TYLILILKLGRAKYFS---LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
TY LI + K F L+ DI+I K + P + +T LI + + D+A F
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMI--KRDIEPAADT-YTILIDNLLKDDEFDQAHDMF 612
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML P + +H L+ A L + G++P+T Y + + A+
Sbjct: 613 DQMLSTGSHPDVFIYTAFIHAYCSH-GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGL--------------------------- 246
G I A+ + +M E G P +Y L++ L
Sbjct: 672 FGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFS 731
Query: 247 --CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
R+ +DL M G P+ +Y + LC+ L A++L MK KG +P
Sbjct: 732 NCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ YN+++ C+ G +A + L+ M N LP+L S + L+ GL D+G + AK+
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ ++ V LI G G D+ + + G H T+ M++
Sbjct: 852 CSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGI 911
Query: 425 EEME 428
+E++
Sbjct: 912 QEID 915
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 1/255 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++K+ G +P+ + + M+ C G I A +F M RG+ P+ Y L+
Sbjct: 158 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 217
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +++ A+++L M PDT++Y L++ LC+ + A M GC P
Sbjct: 218 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP 277
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN ++ GFC+ G AC V +DM S+ C PN+V+Y TL+ GLC + A Y
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYY 337
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
Q M +G P V +L+ G C GK++ C + +E+ ++G A + T ++ +C
Sbjct: 338 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKA 396
Query: 425 EEMEKLGEVLNEIVK 439
+++ + N I K
Sbjct: 397 NRVDEAVSLFNAIRK 411
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 134/264 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + +G + +Y ++ N I A L K+ G P + +Y
Sbjct: 15 LIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNA 74
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A+DLL +++ G PD ++YT+L++ L +KK+ EAYKL M +G
Sbjct: 75 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRG 134
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G + G+ A V + M S GC+P++V+ T++ GLC G A
Sbjct: 135 LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 194
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M ++G +P+ V ALI G C K+D A +L ++ KA P T+ +++ +
Sbjct: 195 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 254
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
C ++ +E+++ K D
Sbjct: 255 CKSGDVAAARAFFDEMLEAGCKPD 278
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 141/297 (47%), Gaps = 1/297 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T ++ A++ A+ + C P N +L L L A DL +
Sbjct: 37 YTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC-KMGRLEEAIDLLRKI 95
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G P+ +Y ++ AY LF +M RG+ D Y L++GL + ++
Sbjct: 96 VDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKI 155
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+A + + M ++G VPD ++ +T+++ LC+ ++ A ++ M+ +G P+ V Y+ +
Sbjct: 156 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 215
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ + A ++L M C P+ ++Y L+ GLC G A+ + M+ G
Sbjct: 216 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGC 275
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
P + LI GFC G D ACGV +++ + +P+ T+ ++ +C ++ K
Sbjct: 276 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ F+SM P + ++ L R + A ++ K P+T +YNI++
Sbjct: 193 AVRIFKSMEARGLAPNEVVYSALIHGLCKARK-MDCALEMLAQMKKAFCTPDTITYNILI 251
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +GD++ A F++M E G PDV +Y IL+ G C+ + A + +DM +
Sbjct: 252 DGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS 311
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++Y TL++ LC++++L +A MK +GC PD Y+++V G C+ G+ C +
Sbjct: 312 PNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCML 371
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
++M +G + N + L+ LC D A + +G PH +++I
Sbjct: 372 FDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIK 429
Query: 389 VGKVDEACGVLEEL 402
GKV+E V +E+
Sbjct: 430 SGKVNEGQAVYQEM 443
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+++I++ G + A++L + G D+ +Y ++ L + ++ AV L+E +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G P +Y LLN LC+ +L EA LL ++ GC PD+V Y +++ G ++ R+
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A K+ ++M S G + V Y L+ GL G A + M S+G P +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I G C G++ A + + + G AP+E + ++ +C +M+ E+L ++ K
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 443 KGDT 446
DT
Sbjct: 241 TPDT 244
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 42/272 (15%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y LI L +A+ ++L +K TP TY LI +S A F
Sbjct: 212 YSALIHGLCKARKMDCALEMLAQMKKAF--CTPDTITYNILIDGLCKSGDVAAARAFFDE 269
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
MLE CKP D++ +YNI++ FC G
Sbjct: 270 MLEAGCKP-----------------------DVY-------------TYNILISGFCKAG 293
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A +F+ M P+V +Y L+ GLC++ Q+ +A + M +G PD+ Y+
Sbjct: 294 NTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYS 353
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L++ LC+ KL L M+ G ++ C+ R +A + +
Sbjct: 354 SLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKE 412
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
G +P+ +Y +++ L G + + Q M
Sbjct: 413 G-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 177/370 (47%), Gaps = 21/370 (5%)
Query: 74 DPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
D L + FD+ SR Q + + Y L+ L R++ FS ++ +L ++ E T
Sbjct: 72 DVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREA 131
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVT-------------- 177
+ +I+ Y++S L ++AL+ + +L+ + P N +L +LV
Sbjct: 132 MSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIM 191
Query: 178 -----HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L L + G +PN YN ++ +C GD+ +A LF ++ +G
Sbjct: 192 VKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF 251
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
+P VE+Y ++ G C+K LL +M ++G + Y T++++ + + +A +
Sbjct: 252 LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVE 311
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ M GC PDIV YNT++ G CR+G+ +A ++LE G +PN SY L+ C
Sbjct: 312 TIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYC 371
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
QG +D A ++ M +G P AL+ G G+VD A + E++L+ G P
Sbjct: 372 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 431
Query: 413 TWVMIVPQIC 422
+ +++ +C
Sbjct: 432 IYNILMSGLC 441
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 137/321 (42%), Gaps = 36/321 (11%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
F + TY +I + F ID +L+ + S V ++ +I + +A
Sbjct: 250 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 309
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
++T M+E CKP N ++ + A L + A G++PN SY ++
Sbjct: 310 VETIEGMIECGCKPDIVTYNTLISG-SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 368
Query: 210 AFC-----------------------------------FNGDISIAYTLFNKMFERGVMP 234
A+C G++ +A T+ KM ERGV P
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 428
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D Y ILM GLC+K ++ A LL +ML++ +PD Y TL++ R L EA KL
Sbjct: 429 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 488
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
KG NP IV YN ++ G+C+ G DA + M P+ +Y T++ G Q
Sbjct: 489 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 548
Query: 355 GMFDVAKKYMQLMISKGFSPH 375
D A+K + M+ P+
Sbjct: 549 HDLDGAQKMFREMVKMKCKPN 569
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 145/293 (49%), Gaps = 4/293 (1%)
Query: 154 RSMLEFNCKPLPKQL---NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
R ++E N + L + N I++ H + ++ A + + + G P+ +YN ++
Sbjct: 276 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK-AVETIEGMIECGCKPDIVTYNTLISG 334
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G +S A L + +G+MP+ SY L+ C++ +RA + L +M +G PD
Sbjct: 335 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 394
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y L++ L ++ A + +M +G PD YN ++ G C++ + A +L
Sbjct: 395 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 454
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M LP+ Y TLV G G D A+K +L I KG +P +A+IKG+C G
Sbjct: 455 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 514
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ +A + + K AP E T+ ++ +++ ++ E+VK++ K
Sbjct: 515 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 567
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ F+Y LI Y + DRA M E KP ++ LV + A
Sbjct: 356 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVV-AGEVDVA 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + + GV P+ YNI+M C + A L +M ++ V+PD Y L+ G
Sbjct: 415 LTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDG 474
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R ++ A L E + KG P + Y ++ C+ +++A + RMK + PD
Sbjct: 475 FIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD 534
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
Y+TV+ G+ ++ A K+ +M C PN++
Sbjct: 535 EFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVMD 572
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF-- 186
+ +L I Y +S P A + F+ M +P N +L LV + + +F
Sbjct: 134 SKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ F A K G++PN ++NI++ +C A N M + PD +Y ++ L
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDAL 253
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+K ++ A DLL DM ++G +P+ +Y L+ C+ L+EA ++ M PD+
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ G C EGR +A K+ ++M + LP++VSY TL+ G + A K ++
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG P+ + ++K +C GK+D+A + ++ ++G +P T+ ++ C
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 427 MEKLGEVLNEIVKVEIKGDT 446
M + ++E+ + +K D+
Sbjct: 434 MGEAFRTMDEMGRKNMKMDS 453
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 5/282 (1%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P++ T+ I IY E+ D A++ M ++NC P N IL+ L + L
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKD-AVEFLNVMGKYNCSPDNVTYNTILDALC-KKGRLGD 261
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A DL G+LPN +YNI++ +C G + A + M + ++PDV +Y +L+
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + ++ A L ++M N +PD +SY TL+N K+ EA+KLL M KG P
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V +N +V +C+EG+ DA + M +G P+ V+Y TL+ G C G A + M
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M K + +++ C K++EA +L K G
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 134/257 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF L + + GV PN ++NIM++ +C G + A KM E G PD +Y
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ + A +++M K D+++ T+L +LCR+KKL EAYKLL + +G
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y T+++G+ ++G A K+ ++M +P+ V+Y ++GGLC G + A
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ G P + + ++ G+C G V++A ++++ P T +++ +
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603
Query: 422 CAGEEMEKLGEVLNEIV 438
C +EK ++ N V
Sbjct: 604 CMEGMLEKALKLFNTWV 620
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 1/351 (0%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
N TY ++ L + D+L+ +KS + + L+ Y + A
Sbjct: 243 NVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + N P N ++ L + + AF L +LP+ SYN ++
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLC-NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
IS A+ L +M E+GV P+ ++ I+++ C++ +++ A + + M GF PD ++Y
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL+N C+ + EA++ + M K D V NT++ CRE + +A K+L
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G + VSY TL+ G G D A K M K P + +I G C GK ++
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A L ELL++G P E T+ I+ C ++EK + N++V+ K D
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 143/301 (47%), Gaps = 4/301 (1%)
Query: 114 IDDILITL-KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD T+ K E +P TY LI Y ++ A +T M N K LN
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
IL L + L A+ L SA K G + SY ++ + +G++ A L+++M E+
Sbjct: 459 ILRTLCREKK-LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
++P +Y ++ GLC+ + +A+ L ++L G +PD +Y T+L+ CR+ + +A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ +M PD+ N ++ G C EG A K+ S G + V+Y TL+
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G D A + M K P +A+I + G++ EA + ++L+ G P
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697
Query: 411 E 411
+
Sbjct: 698 Q 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 3/314 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+ T+ ++K Y + D A T M E P N ++ N + A
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN-MGEA 437
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F + + ++ + N ++R C + AY L + +RG D SY L+ G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ V+RA+ L ++M K +P T++Y ++ LC+ K +A L + G PD
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YNT++ G+CREG A + M N P++ + L+ GLC +GM + A K
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFN 617
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+SKG + + LI C G++D+A +L E+ + P T+ I+ +
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677
Query: 426 EMEKLGEVLNEIVK 439
+ + E ++++++
Sbjct: 678 RIREAEEFMSKMLE 691
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 24/322 (7%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
+ N + + T ++ L R K +L + + Y + + LI Y + D
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RALK + M E P N I+ L A + G+LP+ +YN +
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLC-QCGKTEQAISKLNELLESGLLPDETTYNTI 564
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ +C GD+ A+ NKM E PDV + IL++GLC + + +A+ L ++KG
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGK 624
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
DT++Y TL+ SLC++ +L +A+ LL M+ K PD YN ++ GR +A +
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684
Query: 328 VLEDMPSNGCLP-----------------------NLVSYRTLVGGLCDQGMFDVAKKYM 364
+ M G LP + V+Y + LC +G + A +
Sbjct: 685 FMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744
Query: 365 QLMISKGFSPHFSVSHALIKGF 386
KG + S L+ G
Sbjct: 745 GESKQKGITVDKSTYINLMDGL 766
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 26/182 (14%)
Query: 130 PSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FT L++ + ++ALK F + + K + L + L AF+
Sbjct: 591 PDVFTCNILLRGLCMEGMLEKALKLFNTWVS-KGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD------------ 235
L + + P+ +YN ++ A +G I A +KM E+G +P
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVV 709
Query: 236 -----------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+Y ++ LC + + A+ + + KG D +Y L++ L ++
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
Query: 285 KK 286
+K
Sbjct: 770 RK 771
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 158/314 (50%), Gaps = 13/314 (4%)
Query: 123 SEHYPVTPSLFTYLIKIYAESN-LPDRAL--KTFRSMLEFNCKPLPKQLNRILELLVTHR 179
S ++P + LF LI +S LPD L + +SM EF C P + N +++ L +
Sbjct: 294 SRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAK 353
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A +L +G+ P+ +Y+ ++ C G + A L +M + GV PD +
Sbjct: 354 Q-LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ L + +V+ A+ LE M +G PD ++Y TLL+ LC+ ++ EA L +M
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
C PD+ Y ++ CR G+A A + ++M G LP+ V Y +L+ GL G+ D+
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + ++ + K P F + ++ G C GK ++AC V+E + AG T++ +V
Sbjct: 533 ALELLKTSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVS 589
Query: 420 QICAGEEMEKLGEV 433
+ KLG+V
Sbjct: 590 G------LRKLGKV 597
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 188/428 (43%), Gaps = 72/428 (16%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIK 138
+FD+ RQ ++HS TY + L +A L + ++ YP P FTY +++
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP--PDDFTYSIVLR 81
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKS-AH 193
++ D+A + + E K LN I +V + + A ++FK+ +
Sbjct: 82 GLCKAGELDKAKELLGQLRESGVK-----LNVITYSVVIDGCCKASRVDDALEIFKTMSS 136
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G +P+ ++N +++ C +S A+ LF M + G P+V SY L+ GLC+ +++
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD 196
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L E+M+ K VPD ++YT+ + LC+ ++ EA +M KG D V ++TV+
Sbjct: 197 EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256
Query: 314 LGFCREGRA-----------------IDACKVLEDMPSNG-------------------- 336
C++G A +ACK E+M S
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKR 316
Query: 337 ------------------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
C PNL +Y +V LC D A++ + M + G SP
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
AL+ G C +GK+D AC +LEE+ K G P T I+ + + K+ L+ +
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL---SKAGKVDYALSHLE 433
Query: 439 KVEIKGDT 446
++ +G T
Sbjct: 434 TMKARGST 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 9/265 (3%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
++ N M+ C +G + A F +M R P E + L+ +C+ ++ V L +
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 262 M--LNKGFVPDTL-SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
M + + + P L +Y ++++LC+ K+L EA +L+ M G +PD+V Y+ +V G C+
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G+ AC +LE+M G P+ + +++ L G D A +++ M ++G +P
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ L+ G C G++DEA L +++ A P ++ +I+ +C + + E+V
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 439 KVEIKGDTRIVEAGI------GLED 457
K + DT + + + GLED
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLED 531
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 12/284 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY I++ L +AK +++ + +Y ++P + TY L+ + DRA
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMA--NYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + P IL L + + A ++ G P+ +YN ++ C
Sbjct: 399 EMSKEGVFPDSFTDASILNAL-SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G I A T KM PDV SY I++ LCR Q A + ++M+ +G +PDT+ Y
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+LL+ L R A +LL K C PD V + V+ G C+ G+A DAC+V+E M
Sbjct: 518 HSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMAD 574
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G + +Y ++V GL G D A++ ++ H SV
Sbjct: 575 AGFPADAFTYISVVSGLRKLGKVDKARQ----LVDDASETHTSV 614
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 215 GDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G IS LF+ + ++G V +Y + L + + A + + M +G+ PD +
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ +L LC+ +L +A +LL +++ G +++ Y+ V+ G C+ R DA ++ + M
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 334 S-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S GC+P++V++ +L+ GLC A + M G P+ L+ G C G++
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAG 452
DEAC + EE+++ P + V +C + + + ++V K D
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255
Query: 453 IGL 455
IG+
Sbjct: 256 IGI 258
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 1/327 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A F +L + + F+ LI + ++A + +
Sbjct: 80 TYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 139
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ I++ L N + A + G P +N+++ FC D
Sbjct: 140 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 199
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ AY L M E+G +P+V ++ IL+ GLC+ ++V A LLE M+ G P+ ++Y+T
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N LC++ ++ +AY+L M+ + C P++V +N ++ G C+ R +A ++ M G
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA-LIKGFCNVGKVDEA 395
C P++++Y +L+ GLC D A + Q + G S +V+++ L G+ +G++ +A
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQIC 422
C + L+ G +P T+ ++ + C
Sbjct: 380 CRIFSMLVDKGFSPDLATYTSLILEYC 406
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 166/342 (48%), Gaps = 3/342 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI A + +L +KS + + T L+K ++ AL+ FR+M
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +C P ++ L + A + + G P+T +++ ++ C G
Sbjct: 71 AK-DCAPDVMTYTALVHALCKAGKF-DEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRK-SQVNRAVDLLEDMLNKGFVPDTLSYT 275
A+ + + +RG+ ++ ++Q LC K + V A +L ++ KGF P L +
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 188
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++N C+ K L AYKLL M KGC P++ + ++ G C+ R +A ++LE M +
Sbjct: 189 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG 248
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC PN+V+Y T++ GLC QG D A + QLM + P+ + LI G C +++EA
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + + G AP T+ ++ +C ++++ ++ I
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 134/242 (55%), Gaps = 2/242 (0%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+PN +Y I++R F GD+ IA L +M G + + LM+GLC +V A++
Sbjct: 6 MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
M K PD ++YT L+++LC+ K EA +L M +GC PD V ++T++ G C
Sbjct: 66 HFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ-GMFDVAKKYMQLMISKGFSPHF 376
+ G A +VLED+ G + ++ T++ LC++ ++A K + ++I+KGF+P
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ + +I GFC +D A +LE +++ G P+ T+ +++ +C + + ++L +
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244
Query: 437 IV 438
+V
Sbjct: 245 MV 246
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 7/331 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ T+ LI ++ + A + + M E C P N +++ L + AF
Sbjct: 287 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ-VDEAFQ 345
Query: 188 LFKSAHKHGV-LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF++ + GV N +Y+ + + G ++ A +F+ + ++G PD+ +Y L+
Sbjct: 346 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ S+ V+L+E+M +KGF P + + +L L A +L M +GC D
Sbjct: 406 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 465
Query: 307 VHYNTVVLGFCREGRAIDACKVLE---DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+ YN VV G R + A VLE D P+ + LV LC G D AK+
Sbjct: 466 LIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQL 525
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M +GF+ S + L+ G + + DEA V E ++ AG AP T +++ +C+
Sbjct: 526 LHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCS 585
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ E++ + K+ D IG
Sbjct: 586 AAKVDDAYELVQRMSKLGCCPDIETCNTLIG 616
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 2/254 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY LIL+ + + +++ + S+ +P + + ++ E N +RA++ F S
Sbjct: 396 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 455
Query: 156 MLEFNCKPLPKQLNRILELLV--THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M C N ++E + + N + P++ + + ++ + C
Sbjct: 456 MAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G A L +KM ERG V SY L+ GL R + + A + E M++ G P+ +
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+++ LC K+ +AY+L+ RM GC PDI NT++ G+C+ GRA A K+LE+M
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635
Query: 334 SNGCLPNLVSYRTL 347
G PN ++ L
Sbjct: 636 EAGLEPNDTTHDLL 649
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTT 276
A LF+ M RG D Y ++++G+ R S+ N+A+ +LE +++K F P + +
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDA 508
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ SLC+ + +A +LL +M +G + YN ++ G R R +A +V E M S G
Sbjct: 509 LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAG 568
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P + + ++ LC D A + +Q M G P + LI G+C G+ D A
Sbjct: 569 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 628
Query: 397 GVLEELLKAGEAPHEDT 413
+LEE+ +AG P++ T
Sbjct: 629 KLLEEMTEAGLEPNDTT 645
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRP 184
+P L TY LI Y +++ RA++ + E K P ++N + +L + N+
Sbjct: 392 SPDLATYTSLILEYCKTS---RAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 448
Query: 185 AFDLFKSAHKHGVLPNTKSYNI----MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A LF S G + YN+ M RA N +++ + +K +R P +
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKR-DRKFNPSSSAVD 507
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++ LC+ + + A LL M +GF SY LL+ L R ++ EA ++ M
Sbjct: 508 ALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSA 567
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+I N V+ C + DA ++++ M GC P++ + TL+GG C G D+A
Sbjct: 568 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 627
Query: 361 KKYMQLMISKGFSPHFSVSHALIK 384
+K ++ M G P+ +H L++
Sbjct: 628 RKLLEEMTEAGLEPN-DTTHDLLE 650
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P+ Y ++ GF G A ++LE+M SNG N V + TL+ GLCD G A
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + M +K +P AL+ C GK DEA G+L E++ G AP T+ ++ +
Sbjct: 65 EHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 422 CAGEEMEKLGEVLNEIVK 439
C E+ VL ++++
Sbjct: 124 CKFGSEEQAFRVLEDVIQ 141
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C+PN +Y L+ G G D+A + ++ M S GF + V L+KG C+ G+V EA
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ K AP T+ +V +C + ++ +L E++ DT
Sbjct: 65 EHFRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDT 113
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 182/361 (50%), Gaps = 39/361 (10%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF-------NCKP 163
F+ I + TL+S+ Y +F+ LI Y ES A++ +R E CK
Sbjct: 44 FAAILETKGTLRSDIY-----VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKK 98
Query: 164 LPKQLNR-------------ILEL----------LVTHR----NYLRPAFDLFKSAHKHG 196
+ + L + ILE ++ HR +R A +F + K G
Sbjct: 99 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWG 158
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P+ S+N +M + GD+ + L + M GV PDV +Y +L+ GLC++S+++ A
Sbjct: 159 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGAN 218
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M + + D++ YNT++ G
Sbjct: 219 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 278
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C++G A ++++M G P+ ++Y TL+ G C +G + A ++ + MI +
Sbjct: 279 CKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 338
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
V LI G C G+ +A +L E+L G P T+ MI+ + C ++ ++L E
Sbjct: 339 VVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 398
Query: 437 I 437
+
Sbjct: 399 M 399
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 103 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPS 162
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C I A LF
Sbjct: 163 VVSFNTLMNGYIRLGD-LDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELF 221
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M ++G++P+ ++ L+ G C+ +V+ A+++ + ML++ D ++Y TL+ LC+K
Sbjct: 222 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKK 281
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M++KG PD + Y T++ G C+EG A + + M + V Y
Sbjct: 282 GDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVY 341
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
TL+ GLC +G A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 342 TTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 401
Query: 405 AGEAP 409
G P
Sbjct: 402 DGHVP 406
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 2/302 (0%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L T+LI + ++ + ++A + F M+ P + L+ + + ++ A +
Sbjct: 187 PDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEARE 246
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F K G P+ +YN M+ G A + + M + +P +Y IL+ LC
Sbjct: 247 VFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLC 306
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + RA +L M GF P+++ YT+L++ + +++EA L M G PD++
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ ++ G C+ G A K E+M GC PN+V+Y T++ GL G A + M+ M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I+ G P L+ GFC +G++DEA +L+EL K +P+ + +V +C G +
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSV 486
Query: 428 EK 429
EK
Sbjct: 487 EK 488
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+DD+ K+ + P L +I ++ D A + F+ M+ CKP N ++
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 174 LLVTHR-NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L R N + AF L K G LP+ +Y + C G++ A + + RG
Sbjct: 550 GLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
DV +Y L GLC + QV+RAV L ++M+ +G PD +Y ++N L + KKL +A K
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACK 669
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGL 351
M KG P + Y +V C G +A E M + G L +++ Y L+ G
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGF 729
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C D A K + MIS+G P S +L G GK ++A +L+E+ G PH
Sbjct: 730 CKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNE 436
T+ I+ + +E KL +++ E
Sbjct: 790 ATFTAILDGLRKSDESGKLLKLVQE 814
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 8/366 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI-TLKSEHYPVTPSLFTYL 136
A F +A Q F+H TY L+ L K +S I LK+ P T S F L
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS-FNIL 160
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLFKSAHK 194
I+ +A + D A+ F M CKP L+ L L+ + AF++F
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKP---DLHTFLILVDCLCKAGMDEKAFEVFHEMMA 217
Query: 195 HGVLPNTKS-YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G +P ++ + M+R + A +F +M + G PD +Y ++ GL +
Sbjct: 218 MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQ 277
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ +L++ML K VP ++Y L+NSLC+ L A +L M G P+ V Y +++
Sbjct: 278 EALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GF + GR +AC + ++M G P+++++ ++ GLC G F+ A K + M+ G
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ +I+G +G+V A +++ ++ G P T++ ++ C +++ ++
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 434 LNEIVK 439
L+E+ K
Sbjct: 458 LDELDK 463
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 174/370 (47%), Gaps = 17/370 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAK-YFSLIDDILITLKSEHYPVTPSLF 133
A+E+F + FR ++ Y LI K GR K SL D+++ P +
Sbjct: 314 AEELFRVMA-ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV------EAGYRPDVI 366
Query: 134 TYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
T+ + I +S ++A K+F M+ CKP I++ L + + AF + K
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL-SKIGRVANAFRIMKG 425
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
HG P++ +Y ++ FC G + A L +++ + P+++ Y L+ GLC
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGS 485
Query: 252 VNRAVD-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
V + +D L E D +++ LC+ +L EA ++ RM +GC PD YN
Sbjct: 486 VEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 311 TVVLGFCR--EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
++ G CR E R A +L D+ G LP+ V+Y L GLC G D A K ++
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
S+G++ AL G C G+VD A + +E+++ G AP + I+ + +++E
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLE 665
Query: 429 KLGEVLNEIV 438
+ +E++
Sbjct: 666 DACKFFDEMI 675
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 170/386 (44%), Gaps = 46/386 (11%)
Query: 97 TYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
T+LIL+ L +A K F + +++ P +L T +++ ++ A +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAM---GFVPPDRALHTAMVRTLLKAKRVKEAREV 247
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F M + P N +++ L + + A + + +P +Y I++ + C
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGL-AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLC 306
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A LF M G P+ Y L+ G + ++ A L ++M+ G+ PD +
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++T +++ LC+ +A K M GC P++V Y T++ G + GR +A ++++ M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN---- 388
++GC P+ V+Y L+ G C G D A + + + SP+ + +L+ G C+
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSV 486
Query: 389 --------------------------------VGKVDEACGVLEELLKAGEAPHEDTWVM 416
G++DEAC + + ++ G P T+ +
Sbjct: 487 EKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 417 IVPQICAGEE--MEKLGEVLNEIVKV 440
++ +C E +E+ +L+++ KV
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKV 572
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 3/260 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD--ISIAYTLFNKMFERGVMPDVESY 239
L A +F+ G P+ +YNI++ C + + + A+ L + + + G +PD +Y
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L GLC+ +V+RAV +LE+ ++G+ D ++YT L LC + ++ A L M
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD Y ++ G + + DACK ++M G P + +Y LV LC G D
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Query: 360 AKKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+++G + ALI GFC KVD A + E+++ G P T +
Sbjct: 702 AFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLF 761
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+ + EK E+L E+
Sbjct: 762 DGLVRSGKTEKAQELLQEMA 781
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 170/415 (40%), Gaps = 74/415 (17%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
+ ++ L +AK ++ ++ +P + +I A++ ALK +ML
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
C P ++ L L A +LF+ G PN+ Y ++ F +G +
Sbjct: 288 AKACVPTEVTYGILVNSLC-KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A +LF++M E G PDV ++ +++ GLC+ +A E+M+ G P+ ++YTT+
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ L + ++ A++++ M GC PD V Y ++ GFC+ GR +A ++L+++
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466
Query: 338 LPNLVSYRTLVGGLCD------------------------------------QGMFDVAK 361
PNL Y +LV GLCD G D A
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526
Query: 362 KYMQLMISKGFSPH----------------------FSVSHALIK--------------- 384
+ Q M+S+G P F++ H L K
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G C +G+VD A +LEE G + + +C ++++ + E+V+
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 7/346 (2%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLPDRALKTF 153
N TY +L+ A D+L ++ + TPS++ + + +S A++
Sbjct: 18 NYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVV 77
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
++M + CKP N ++ L L A + + G N +YN ++
Sbjct: 78 KNMKDGACKPDVVTFNTLIAGLC-KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTL 272
G A + M PD ++Y ++ G C+ +++RA LE+M + G PDT
Sbjct: 137 AGRSGEAVLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y+ L+N LC+ LR+A +LL M K C +V +NT+V G+C+ A ++L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M +GC P++V+Y T++ GLC G D ++ M+S+G P L+ G C GK
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ EAC +++ +L+ G P+ T+ ++ +C ++++ ++L I
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 11/275 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+++ D R F + TY LI L A + +L+ + TP TY
Sbjct: 108 AQQVLDEMERS-GFAANLVTYNTLINGLSSAGRSG--EAVLVM---QGMTTTPDTQTYNA 161
Query: 136 LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA-H 193
+I + +S DRA M + C P + ++ L N LR A +L +
Sbjct: 162 IIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN-LRKADELLQEMIG 220
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ + ++N ++ +C D+ A L + M E G PDV +Y ++ GLCR V+
Sbjct: 221 RKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVD 280
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+ LLE M+++G PD ++YT L+ LC+ K+ EA +L+ RM GC P+ V Y+ V
Sbjct: 281 KGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVF 340
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
G C+ + A +L + G + ++V++ L+
Sbjct: 341 DGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 129 TPSLFTYLIKIYA---ESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRP 184
+P FTY I I SNL +A + + M+ +C N +++ ++ R
Sbjct: 189 SPDTFTYSILINGLCKSSNLR-KADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR- 246
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L S +HG P+ +Y+ ++ C GD+ + L KM RG PDV +Y +L+
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ A L++ ML G P+ ++Y+ + + LC+ KL A LL ++ KG
Sbjct: 307 GLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRIT 366
Query: 305 DIVHYNTVVL 314
D+V + ++L
Sbjct: 367 DVVAFEALLL 376
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITL-KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY ILI L ++ D++L + + + F L+ Y ++ DRA + S
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
MLE C P + I++ L + + F L + G P+ +Y +++ C G
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGD-VDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L +M E G P+ +Y ++ GLC+ +++ A DLL + +KG + D +++
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFE 372
Query: 276 TLLNSLCRKKKLREAYK 292
LL S+ ++ R A++
Sbjct: 373 ALLLSVKKRLLDRAAFQ 389
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 173/344 (50%), Gaps = 5/344 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR--ALKTFR 154
T I++ +A F +D ++ + E V P + T+ + + A D A+
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEM--EKRCVFPDVVTHNVMVDARFRAGDAEAAMALVD 215
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
SM+ KP N +L+ L + + A+++FK GV P+ +S+ I++ FC
Sbjct: 216 SMVSKGLKPGIVTYNSVLKGLCRSGMWDK-AWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G+I A ++ +M RG+ PD+ S+ L+ R+ +++ A+ L +M G VPD + Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T ++ CR + +A ++ M GC PD+V YNT++ G C+E R +DA +L +M
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P+L ++ TL+ G C +G D A + M+++ P + LI G C G +D+
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
A + +++ P+ T+ +++ C ++E L+E++
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T +I + + L AL+ M+ C P N +L L R L A L
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL-DAEGLLNE 391
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ +C G + A LF+ M + + PD+ +Y L+ G+CR+
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+++A DL +DM ++ P+ ++Y+ L++S C K ++ +A+ L M KG P+I+ YN+
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G K L+ M N P+L++Y TL+ G + A K + +M +
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-MIVPQICAGEEME 428
P + LI GF G V EA + E++ G P T++ MI + AG E
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 629
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 137/258 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L S G+ P +YN +++ C +G A+ +F +M + GV PDV S+ IL+
Sbjct: 210 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR ++ A+ + ++M ++G PD +S++ L+ R+ K+ A L M+ G P
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y V+ GFCR G DA +V ++M GCLP++V+Y TL+ GLC + A+ +
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G P LI G+C GK+D+A + + +L P T+ ++ +C
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449
Query: 425 EEMEKLGEVLNEIVKVEI 442
+++K ++ +++ EI
Sbjct: 450 GDLDKANDLWDDMHSREI 467
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Query: 124 EHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ + V P + FT LI + + ALK ++ M KP + ++ L R
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF-ARRGK 311
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + G++P+ Y +++ FC G +S A + ++M G +PDV +Y
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ ++ A LL +M +G PD ++TTL++ C + KL +A +L M +
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YNT++ G CR+G A + +DM S PN V+Y L+ C++G + A
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ MI+KG P+ +++IKG+C G V + L++++ +P T+ ++
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
++M ++LN + K +++ D
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDV 576
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF + + P+ +YN ++ C GD+ A L++ M R + P+ +Y I
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C K QV A L++M+NKG +P+ ++Y +++ CR + + K L +M V
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G+ +E + DA K+L M P++V+Y L+ G G A
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+ M +KG P ++I G G EA + +E+L+ G AP +
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 157/327 (48%), Gaps = 11/327 (3%)
Query: 125 HYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----H 178
H + P L F+ LI ++A D A+ R M F P + ++ +V
Sbjct: 289 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP-----DGVIYTMVIGGFCR 343
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ A + G LP+ +YN ++ C + A L N+M ERGV PD+ +
Sbjct: 344 AGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 403
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C + ++++A+ L + MLN+ PD ++Y TL++ +CR+ L +A L M
Sbjct: 404 FTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH 463
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ P+ V Y+ ++ C +G+ DA L++M + G LPN+++Y +++ G C G
Sbjct: 464 SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 523
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+K++Q M+ SP + LI G+ K+ +A +L + K P T+ M++
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++ G + ++ I+ D
Sbjct: 584 NGFSVHGNVQEAGWIFEKMCAKGIEPD 610
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 125/309 (40%), Gaps = 36/309 (11%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P +F LI+ Y +S P A + FR +L+ P+P + L ++ + A D +
Sbjct: 86 PRVFDLLIRTYTQSRKPREAFEAFRLILDHRV-PIPAAASNALLAALSRAGWPHLAADAY 144
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ NT + NIM+ +C +
Sbjct: 145 RLVFSSNSEVNTYTLNIMVHNYC-----------------------------------KA 169
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ ++ ++ +M + PD +++ ++++ R A L+ M KG P IV Y
Sbjct: 170 LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTY 229
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N+V+ G CR G A +V ++M G P++ S+ L+GG C G + A K + M
Sbjct: 230 NSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 289
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+G P LI F GK+D A L E+ G P + M++ C M
Sbjct: 290 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSD 349
Query: 430 LGEVLNEIV 438
V +E+V
Sbjct: 350 ALRVRDEMV 358
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 34/278 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L + + + +L ++ P FT LI Y D+AL+ F +M
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Query: 157 LEFNCKPLPKQLNRIL----------------------ELLVTHRNY------------L 182
L +P N ++ E+ H Y +
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
AF G+LPN +YN +++ +C +G++S KM V PD+ +Y L
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G ++ +++ A LL M + PD ++Y L+N ++EA + +M KG
Sbjct: 548 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
PD Y +++ G G + +A ++ ++M G P+
Sbjct: 608 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 289 EAYKLLCRMKVKGCNPDIVHY--NTVVLGFCR--EGRAIDACKVLEDMPSNGCLPNLVSY 344
+AY+L V N ++ Y N +V +C+ E +DA V+ +M P++V++
Sbjct: 142 DAYRL-----VFSSNSEVNTYTLNIMVHNYCKALEFDKVDA--VISEMEKRCVFPDVVTH 194
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+V G + A + M+SKG P ++++KG C G D+A V +E+
Sbjct: 195 NVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 254
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
G AP ++ +++ C E+E+ ++ E+ IK D IGL
Sbjct: 255 FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 305
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 8/349 (2%)
Query: 124 EHYPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
E YP P++F LI++ N+ A++ FR M P N +L LV R
Sbjct: 100 ETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDRE 159
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ + FK + V PN ++NI++ A C G A L KM E G P +Y
Sbjct: 160 -VDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYN 218
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ C+K + A +L++ M +KG D +Y L++ LCRK + + Y +L RM+
Sbjct: 219 TLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKN 278
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
P+ + YNT++ G +EG+ A KV E+M LPN V+Y TL+ G C G + A
Sbjct: 279 MVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEA 338
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ +M+S G P+ AL+ G + VLE + G ++ ++
Sbjct: 339 LRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDG 398
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469
+C +E+ ++L++++KV + D IV + + +L KT P R
Sbjct: 399 LCKNGLLEEAVQLLDDMLKVSVSPD--IVTFSVLVNGFL--KTGLVPNR 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 1/316 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P+++T L+ + AL F ML +P N +L+ + + + D+
Sbjct: 654 PAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRY-SRKGKMSKVNDIL 712
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ + N +YNI++ + ++ L+N+M G PD ++ L+ G C+
Sbjct: 713 STMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKS 772
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ AV L + +GF D + L++ LC + +++ A+ L+ ++ + G P++ Y
Sbjct: 773 GSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTY 832
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N++ GF R +A +L + NG P + TL+ G+C G A + M
Sbjct: 833 NSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKI 892
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G S A+I+G K DEA +L +L+ P T+ ++ C + K
Sbjct: 893 LGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAK 952
Query: 430 LGEVLNEIVKVEIKGD 445
E+ + + + +K D
Sbjct: 953 ALELRSVMEQCHVKLD 968
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F+ +LPN+ +YN ++ C NG+I A L + M G+ P+ +Y L+
Sbjct: 303 ATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLN 362
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+ + +Q +LE M G +SYTT+++ LC+ L EA +LL M +P
Sbjct: 363 GISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSP 422
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV ++ +V GF + G +PN V + TL+ C G A
Sbjct: 423 DIVTFSVLVNGFLK----------------TGLVPNRVLHSTLIYNYCKMGNLKEALNAY 466
Query: 365 QLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+M G S HF+ S L+ FC G+++EA ++ + + G AP T+ I+
Sbjct: 467 AVMNQSGHVSDHFT-SSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCII 520
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 156/356 (43%), Gaps = 7/356 (1%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
+L+ + R S ++DIL T++S + + L+ Y++ + R K + M+
Sbjct: 694 VLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIH 753
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P + ++ L L A + G + + N+++ C +I +
Sbjct: 754 GFAPDRLTWHSLI-LGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKM 812
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ L ++ GV P+V++Y L G R + A +L +L G+ P +TTL+
Sbjct: 813 AFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIR 872
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+CR ++ A +L MK+ G + V + ++ G R + +A ++L M +P
Sbjct: 873 GMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIP 932
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ ++ TL+ C +G A + +M + + LI G C G + A +
Sbjct: 933 TVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLY 992
Query: 400 EELLKAGEAPHEDTWVMIVPQ-ICAGE---EMEKLGEVL--NEIVKVEIKGDTRIV 449
EE+ + P+ +++++ +C G E EKL L E++ +++ G I+
Sbjct: 993 EEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIEIL 1048
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 144/318 (45%), Gaps = 22/318 (6%)
Query: 96 STYLILIL----KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
+TY IL+ + G A+ L ++++I + P T+ LI Y +S D A
Sbjct: 725 ATYNILLHGYSKRHGMARCSKLYNEMII------HGFAPDRLTWHSLILGYCKSGSLDVA 778
Query: 150 LKTFRSM----LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+K R + + +C L ++++ E RN ++ AFDL K + GV PN +YN
Sbjct: 779 VKFLRKITVEGFKVDCFTLNVLVSKLCE-----RNEIKMAFDLVKQLNMLGVTPNVDTYN 833
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+ F A + + + E G P + + L++G+CR V A++L ++M
Sbjct: 834 SLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKIL 893
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G ++ + ++ L R +K EA ++L M P + + T++ +C+EG A
Sbjct: 894 GVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKA 953
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ M ++ +Y L+ GLC G A K + M + P+ S+ LI
Sbjct: 954 LELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDS 1013
Query: 386 F-CNVGKVDEACGVLEEL 402
F C + E+ +L +L
Sbjct: 1014 FLCTGNYIVESEKLLRDL 1031
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 73/316 (23%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY-------------- 239
+ G+ P++ +++ ++ + +GD A+++F+KM G +P +Y
Sbjct: 506 RMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHIN 565
Query: 240 --RILMQG-------------------LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+I M R ++ AV LL++M+ FVPD+ +YT+L+
Sbjct: 566 EAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLI 625
Query: 279 NSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
LCRK K+ A L R KG +P+ Y ++V G +EG + A + EDM + G
Sbjct: 626 AGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGV 685
Query: 338 LP-----------------------------------NLVSYRTLVGGLCDQ-GMFDVAK 361
P NL +Y L+ G + GM +K
Sbjct: 686 QPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSK 745
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Y +++I GF+P H+LI G+C G +D A L ++ G T ++V ++
Sbjct: 746 LYNEMII-HGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKL 804
Query: 422 CAGEEMEKLGEVLNEI 437
C E++ +++ ++
Sbjct: 805 CERNEIKMAFDLVKQL 820
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 109/277 (39%), Gaps = 32/277 (11%)
Query: 110 YFSLIDDI----------LITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML 157
Y LIDD+ LI + V P+ TY LI + A K F M
Sbjct: 252 YNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMS 311
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
N P N ++ ++ N + A L HG+ PN +Y ++ +
Sbjct: 312 LCNLLPNSVTYNTLIFGHCSNGN-IEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQF 370
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN------------- 264
+ ++ +M GV SY ++ GLC+ + AV LL+DML
Sbjct: 371 GLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVL 430
Query: 265 ------KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
G VP+ + ++TL+ + C+ L+EA M G D + +V FCR
Sbjct: 431 VNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCR 490
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
GR +A ++ M G P+ V++ ++ + G
Sbjct: 491 CGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSG 527
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 164/327 (50%), Gaps = 1/327 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A F +L + ++ F+ LI + ++A + +
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ I++ L N + A + G P +N+++ FC D
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ AY L M E+G +P+V ++ IL+ GLC+ ++V A LLE M+ G P+ ++Y+T
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N LC++ ++ +AY+L M+ + C P++V +N ++ G C+ R +A ++ M G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA-LIKGFCNVGKVDEA 395
C P++++Y +L+ GLC D A + Q + G S +V+++ L G+ +G++ +A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQIC 422
C + L+ G +P T+ ++ + C
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLILEYC 454
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 3/342 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI A + +L +KS + + T L+K ++ AL+ FR+M
Sbjct: 59 TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 118
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +C P ++ L + A + + G P+T +++ ++ C G
Sbjct: 119 AK-DCAPDVMTYTALVHALCKAGKF-DEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGS 176
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRK-SQVNRAVDLLEDMLNKGFVPDTLSYT 275
A+ + + +RG+ ++ ++Q LC K + V A +L ++ KGF P L +
Sbjct: 177 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 236
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++N C+ K L AYKLL M KGC P++ + ++ G C+ R +A ++LE M
Sbjct: 237 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG 296
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC PN+V+Y T++ GLC QG D A + QLM + P+ + LI G C +++EA
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + + G AP T+ ++ +C ++++ ++ I
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 142/260 (54%), Gaps = 2/260 (0%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A LF++A +PN +Y I++R F GD+ IA L +M G + +
Sbjct: 36 NRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVH 95
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM+GLC +V A++ M K PD ++YT L+++LC+ K EA +L M
Sbjct: 96 TTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVA 154
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ-GMFD 358
+GC PD V ++T++ G C+ G A +VLED+ G + ++ T++ LC++ +
Sbjct: 155 QGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVE 214
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+A K + ++I+KGF+P + + +I GFC +D A +LE +++ G P+ T+ +++
Sbjct: 215 LASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILI 274
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+C + + ++L ++V
Sbjct: 275 TGLCKANRVGEAQQLLEKMV 294
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 7/331 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ T+ LI ++ + A + + M E C P N +++ L + AF
Sbjct: 335 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ-VDEAFQ 393
Query: 188 LFKSAHKHGV-LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF++ + GV N +Y+ + + G ++ A +F+ + ++G PD+ +Y L+
Sbjct: 394 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 453
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ S+ V+L+E+M +KGF P + + +L L A +L M +GC D
Sbjct: 454 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 513
Query: 307 VHYNTVVLGFCREGRAIDACKVLE---DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+ YN VV G R + A VLE D P+ + LV LC G D AK+
Sbjct: 514 LIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQL 573
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M +GF+ S + L+ G + + DEA V E ++ AG AP T +++ +C+
Sbjct: 574 LHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCS 633
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ E++ + K+ D IG
Sbjct: 634 AAKVDDAYELVQRMSKLGCCPDIETCNTLIG 664
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY LIL+ + + +++ + S+ +P + + ++ E N +RA++ F S
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 503
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCF 213
M C N ++E + + + L + K P++ + + ++ + C
Sbjct: 504 MAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G A L +KM ERG V SY L+ GL R + + A + E M++ G P+ +
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+++ LC K+ +AY+L+ RM GC PDI NT++ G+C+ GRA A K+LE+M
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683
Query: 334 SNGCLPNLVSYRTL 347
G PN ++ L
Sbjct: 684 EAGLEPNDTTHDLL 697
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTT 276
A LF+ M RG D Y ++++G+ R S+ ++A+ +LE +++K F P + +
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDA 556
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ SLC+ K +A +LL +M +G + YN ++ G R R +A +V E M S G
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAG 616
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P + + ++ LC D A + +Q M G P + LI G+C G+ D A
Sbjct: 617 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 676
Query: 397 GVLEELLKAGEAPHEDT 413
+LEE+ +AG P++ T
Sbjct: 677 KLLEEMTEAGLEPNDTT 693
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRP 184
+P L TY LI Y +++ RA++ + E K P ++N + +L + N+
Sbjct: 440 SPDLATYTSLILEYCKTS---RAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 496
Query: 185 AFDLFKSAHKHGVLPNTKSYNI----MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A LF S G + YN+ M RA + +++ + +K +R P +
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKR-DRKFNPSSSAVD 555
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++ LC+ + + A LL M +GF SY LL+ L R ++ EA ++ M
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSA 615
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+I N V+ C + DA ++++ M GC P++ + TL+GG C G D+A
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 675
Query: 361 KKYMQLMISKGFSPHFSVSHALIK 384
+K ++ M G P+ +H L++
Sbjct: 676 RKLLEEMTEAGLEPN-DTTHDLLE 698
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ S L+ LCR + +EA L + C P+ Y ++ GF G A ++L
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
E+M S+G N V + TL+ GLCD G A ++ + M +K +P AL+ C
Sbjct: 81 EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKA 139
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
GK DEA G+L E++ G AP T+ ++ +C E+ VL ++++
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 194/419 (46%), Gaps = 56/419 (13%)
Query: 75 PLLAKEIFDYASRQPNFRHS--------------------NSTYLILILKLGRAKYFSLI 114
PL F+Y + +P FRH+ +S +L +I K+G SLI
Sbjct: 79 PLSLFSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLI 138
Query: 115 DDILITLKSEH-YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
++ T+ + H + + +F LI Y +S + A++ R + + N + +L
Sbjct: 139 SSLIQTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLR 198
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-- 231
++ ++ + +G PN +NI+M FC GD+ A +F+++ RG
Sbjct: 199 RVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLR 258
Query: 232 ---------------------------------VMPDVESYRILMQGLCRKSQVNRAVDL 258
+ PDV +Y L+ GLC++S+V A L
Sbjct: 259 PSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL 318
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
++M G VP+ +++TTL++ C+ K+ A + MK +G PD++ YN ++ G CR
Sbjct: 319 FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCR 378
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+G +A K+L +M NG P+ +++ TL+ G C G D A + M+ +G
Sbjct: 379 DGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVA 438
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
ALI G C G+V +A +L+++L AG P + T+ M++ C +++ ++L E+
Sbjct: 439 FTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 126/238 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G++PN ++ ++ C +G I +A F M +RG+ PD+ +Y L+
Sbjct: 315 ANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALIN 374
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLCR + A LL +M+ GF PD +++TTL++ C+ + A ++ RM +G
Sbjct: 375 GLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIEL 434
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V + ++ G CR+GR DA ++L+DM S G P+ +Y ++ C +G + K +
Sbjct: 435 DDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLL 494
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M G P +AL+ GFC G++ A +L +L P++ T+ +++ C
Sbjct: 495 KEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 6/320 (1%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
D + A+ +FD SR+ R S ++ LI R+K ++ + ++ E ++P +
Sbjct: 240 GDVMNARMVFDEISRR-GLRPSVVSFNTLISGYCRSK--NVEEGFVLKSVMESERISPDV 296
Query: 133 FTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
FTY LI + + + A F M E P +++ H + A F+
Sbjct: 297 FTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGK-IDLALRNFE 355
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ P+ +YN ++ C +GD+ A L N+M G PD ++ LM G C+
Sbjct: 356 IMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDG 415
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ A+++ + M+ +G D +++T L++ LCR ++R+A ++L M G PD Y
Sbjct: 416 DMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYT 475
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
V+ FC++G K+L++M +G +P +V+Y L+ G C QG AK + M++
Sbjct: 476 MVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNM 535
Query: 371 GFSPHFSVSHALIKGFCNVG 390
P+ + L+ G C G
Sbjct: 536 EVVPNDITFNILLDGHCKHG 555
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 148/317 (46%), Gaps = 1/317 (0%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
YP LF L+ + + A F + +P N ++ +N +
Sbjct: 222 YPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKN-VEEG 280
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L + P+ +Y+ ++ C + A LF++M E G++P+ ++ L+ G
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A+ E M ++G PD ++Y L+N LCR L+EA KLL M G PD
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ + T++ G C++G A ++ + M G + V++ L+ GLC G A++ ++
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+S G P +I FC G V +L+E+ + G P T+ ++ C
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520
Query: 426 EMEKLGEVLNEIVKVEI 442
+M+ +L+ ++ +E+
Sbjct: 521 QMKNAKMLLHAMLNMEV 537
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 39/251 (15%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + D AL+ F M + +P N ++ L + L+ A L
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD-LKEARKLLNEM 392
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G P+ ++ +M C +GD+ A + ++M E G+ D ++ L+ GLCR +V
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452
Query: 253 NRAVDLLEDMLNKGFVPD-----------------------------------TLSYTTL 277
A +L+DML+ G PD ++Y L
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N C++ +++ A LL M P+ + +N ++ G C+ G ++D K+ G
Sbjct: 513 MNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDF-KIFNG--EKGL 569
Query: 338 LPNLVSYRTLV 348
+ + SY LV
Sbjct: 570 VSDYASYTALV 580
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 36/133 (27%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R+ R D+ + HK P+ +Y +++ FC GD+ + L +M G +P V +
Sbjct: 453 RDAERMLKDMLSAGHK----PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVT 508
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLN--------------------------------KG 266
Y LM G C++ Q+ A LL MLN KG
Sbjct: 509 YNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKG 568
Query: 267 FVPDTLSYTTLLN 279
V D SYT L+N
Sbjct: 569 LVSDYASYTALVN 581
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 5/315 (1%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY I + + D A + F M+E C N ++ L N R A
Sbjct: 41 VNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIER-A 99
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ L + G P+ +YN ++ C G +S A F+ M RG PDV +Y L+
Sbjct: 100 YKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDA 159
Query: 246 LCRKSQVNRAVDLLE--DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
L ++ +V A L + DM ++ PD ++Y TL++ CR +K EA KL + KG
Sbjct: 160 LYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYM 219
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD V YN+++LG R+ +A ++ + M +GC PN +Y ++ G C G +
Sbjct: 220 PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M K FSP + +A+I C KVD+A VLEE+ K G P T+ +++ +C
Sbjct: 280 YEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Query: 424 GEEMEKLGEVLNEIV 438
++K E+ + +V
Sbjct: 340 TNLVDKAHELFSTMV 354
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ + + GV P+ +Y I++ C G + A LF+KM ERG + +Y L+
Sbjct: 29 ALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALIN 88
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + RA LLE+M +KG+ PD ++Y T+L+ LCR K+ EA + M +G +P
Sbjct: 89 GLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 148
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLE--DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D+V YN ++ +EG+ +A + + DM P+L++Y TL+ G C D A K
Sbjct: 149 DVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMK 208
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ +I+KG+ P ++++ G +DEA + ++++ +G AP+ T+ +++ C
Sbjct: 209 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHC 268
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
M + E+ E+ + D + A I +
Sbjct: 269 RVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 2/247 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G P+ +Y+ ++ C G ++ A + +M E+GV PDV +Y I++ LCR +V+
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A +L M+ +G +T++Y L+N LC+ + + AYKLL M KG PD + YNT++
Sbjct: 63 EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKG 371
G CR G+ +A + + MPS G P++V+Y L+ L +G A + M +
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+P + LI GFC V K DEA + ++++ G P T+ I+ + M++
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 432 EVLNEIV 438
E+ ++V
Sbjct: 243 EMFKKMV 249
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 3/262 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L +I + ++ D A K M + P N +L+ L N + A +LF +
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC-KTNLVDKAHELFST 352
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+G P+ SY++++ C + A LF++M ER ++PDV ++ ILM GLC+ +
Sbjct: 353 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 412
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A DLL+ M +PD ++ TTL++ LCR K+ EA +L M KG D++ +N
Sbjct: 413 LDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNI 472
Query: 312 VVLGFCREGRAIDACKVLEDM-PSNGCL-PNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
V+ G CREG+ A + M S+G P++V+Y TLV L + G D A Y Q M
Sbjct: 473 VLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTG 532
Query: 370 KGFSPHFSVSHALIKGFCNVGK 391
G +P + + L+ G G+
Sbjct: 533 SGCAPDYVAYNTLMNGLRKQGR 554
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 142/289 (49%), Gaps = 3/289 (1%)
Query: 120 TLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
T+ V P L TY LI + D A+K F+ ++ P N IL L +
Sbjct: 175 TMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL-LGLA 233
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
++ + A ++FK G PN +Y+I++ C G+++ L+ +M E+ PDV
Sbjct: 234 RKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVL 293
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ LC+ +V+ A +LE+M G VPD ++Y LL+ LC+ + +A++L M
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
GC PDIV Y+ V+ G C+ + DA + + M +P++V++ L+ GLC G
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
D AK + +M P L+ G C + DEA + + +++ G
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 38/377 (10%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY I++ +L RA D++ + + LI + +RA K
Sbjct: 46 ATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEE 105
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M +P N IL L + A F S G P+ +YN ++ A G
Sbjct: 106 MASKGYEPDNITYNTILSGLC-RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 164
Query: 216 DISIAYTLFN--KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
++ A+ LF M +R V PD+ +Y L+ G CR + + A+ L +D++ KG++PDT++
Sbjct: 165 KVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG------------- 320
Y ++L L RK + EA ++ +M GC P+ Y+ V+ G CR G
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284
Query: 321 ----------------------RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ DA KVLE+M G +P++V+Y L+ GLC + D
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+ G +P ++ G C KV +A + + +++ P T+ +++
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404
Query: 419 PQICAGEEMEKLGEVLN 435
+C ++++ ++L+
Sbjct: 405 DGLCKAGKLDEAKDLLD 421
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 156/344 (45%), Gaps = 23/344 (6%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY---LIKIYAESNLPD 147
+ N TY ++ L R S ++ S Y +P + Y L +Y E + +
Sbjct: 111 YEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY--SPDVVAYNGLLDALYKEGKVAE 168
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR---------PAFDLFKSAHKHGVL 198
A F++M + K P L+T+ + A LFK G +
Sbjct: 169 -AWGLFKTMDMADRKVAPD--------LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYM 219
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T +YN ++ ++ A +F KM + G P+ +Y I++ G CR + R ++L
Sbjct: 220 PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M K F PD L +++ LC+ KK+ +A+K+L M G PD+V YN ++ G C+
Sbjct: 280 YEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
A ++ M NGC P++VSY ++ GLC A+ MI + P
Sbjct: 340 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 399
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ L+ G C GK+DEA +L+ + + P T ++ +C
Sbjct: 400 FNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC 443
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M E+G PDV +Y ++ GLC+ +V A++++E+M KG PD +YT +++ LCR K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA +L +M +GC+ + V YN ++ G C++ A K+LE+M S G P+ ++Y T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ GLC G AK++ M S+G+SP + L+ GKV EA G+ + + A
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 407 E--APHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
AP T+ ++ C E+ ++ ++ +++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVI 214
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 5/285 (1%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+ TY I + + + R L+ + M E P N ++++L + + A
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK-VDDAH 312
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + K G +P+ +YNI++ C + A+ LF+ M + G PD+ SY +++ GL
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 372
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++V+ A L + M+ + VPD +++ L++ LC+ KL EA LL M PD
Sbjct: 373 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDG 432
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V T++ G CR+ R +A ++ + M G + +++ + ++ GLC +G A + +
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492
Query: 367 MI-SKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M+ S G FSP L+ G+VD+A +++ +G AP
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAP 537
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 40/250 (16%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY L+ ++NL D+A + F +M++ C P + +L L N + A
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC-KTNKVHDARV 383
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF + ++P+ ++NI+M C G + A L + M E V+PD + LM GLC
Sbjct: 384 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC 443
Query: 248 RKSQVNRAVDLLEDMLNKG-------------------------------------FVPD 270
R + + AV L + M+ KG F PD
Sbjct: 444 RDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPD 503
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++YTTL+N+L ++ +A +M GC PD V YNT++ G ++GR I A ++ +
Sbjct: 504 VVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQ 563
Query: 331 DMPSNGCLPN 340
M G L +
Sbjct: 564 AMKEKGFLSD 573
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 5/177 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF-TYLIKIYAESNLPDRALKTFRS 155
T+ IL+ L +A D+L + SEH + + T L+ D A++ F+
Sbjct: 399 TFNILMDGLCKAGKLDEAKDLLDVM-SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQY 457
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCF 213
M+E N +L L L A FKS K P+ +Y ++ A
Sbjct: 458 MVEKGTVADVLPHNIVLAGLC-REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIE 516
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G + A F +M G PD +Y LM GL ++ + +A L + M KGF+ D
Sbjct: 517 AGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 213/455 (46%), Gaps = 27/455 (5%)
Query: 19 AVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSIS-NSKSPIGSPCRVQKLIAS-QSDPL 76
+ TF KT +L + P S Q ++S++ + S + P + +++ S + PL
Sbjct: 9 STTFFSKTITLFL--KPHFRFYPFSTNPQIDNSVNPHFHSAVTQPEFLLRVLNSVKHRPL 66
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRA-----KYFSL-----------IDDILIT 120
A F + +QPNF S + ++ ++ L + Y+ + + D+L+
Sbjct: 67 TALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVG 126
Query: 121 LK-SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+ + V+ L LI+++A+ + ++ L F M+ P + NR+L+LL +
Sbjct: 127 IGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLL-KDK 185
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ + +++ K + P ++N MM + C G++ A + + M G P+ SY
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+L+ GL K + +RA +L+E M G +Y L+ C+K+ EA L M
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P +V YNT++ CR GR DA + L+ M + +P+LVSY TL+ G G F
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + SK P + LI G C G +D A G+ ++++K G P T+ ++V
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGD-----TRIV 449
C + E+ +E++ +K D TRIV
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIV 460
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P L +Y IY S L + AL F + N P N +++ N L A
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN-LDIA 401
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ KHG+ P+ ++ I++R FC G++ +A LF++M RG+ PD +Y + G
Sbjct: 402 KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ ++A + E+M +GF PD ++Y L+N LC+ +A +L+ +M+++G PD
Sbjct: 462 ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPD 521
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y +++ G A +V DM G P++V+Y L+ +G D AKKY
Sbjct: 522 HVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFD 581
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M KG SP+ +ALI G C +D A + E+ G +P++ T+ +++ + +
Sbjct: 582 EMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQ 641
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+ ++ +++ EIK D+
Sbjct: 642 YWQDALKLYKDMLDREIKPDS 662
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 1/290 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA++ M F C P N ++ L + R A +L + G+ + +YN +
Sbjct: 225 RAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR-AKELIEQMSMLGLKVSAHTYNPL 283
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R FC A L +M RG +P V +Y +M LCR +V+ A L+ M+N+
Sbjct: 284 IRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDL 343
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+PD +SY TL+ R EA L ++ K P +V YNT++ G CR G A
Sbjct: 344 MPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKG 403
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ +DM +G P++V++ LV G C G +AK+ M+S+G P I G
Sbjct: 404 MKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+G +A G+ EE+ G P T+ +++ +C + E++ ++
Sbjct: 464 KLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKM 513
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 133 FTYLIKIYAE-SNLPDRALKTFRSMLEFNCKP--LPKQLNRILELLVTHRNYLRPAFDLF 189
FT L++ + + NLP A + F ML KP + + EL + + + AF +
Sbjct: 420 FTILVRGFCQMGNLP-MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPS---KAFGMK 475
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ G P+ +YN+++ C G+ A L KM G++PD +Y ++
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ +A ++ DML KG P ++YT L++S + +L A K M+ KG +P+++ Y
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N ++ G C+E A + +M S G PN +Y L+ + + A K + M+
Sbjct: 596 NALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLD 655
Query: 370 KGFSPHFSVSHALIK 384
+ P AL+K
Sbjct: 656 REIKPDSCTHSALMK 670
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAE--SNLPDRALKTFR 154
TY +LI L + F ++++ ++ E + P TY I+A S L +A + F
Sbjct: 489 TYNVLINGLCKLGNFDDANELVQKMRLE--GIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL----FKSAHKHGVLPNTKSYNIMMRA 210
ML+ P + + ++ H +R D F GV PN +YN ++
Sbjct: 547 DMLKKGIHP-----SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C + +AY LF +M +GV P+ +Y IL+ A+ L +DML++ PD
Sbjct: 602 LCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPD 661
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL--GFCR 318
+ +++ L+ K L + YKLL ++++ IV N+ + GF +
Sbjct: 662 SCTHSALM------KHLSKDYKLLAVLRLENLPLAIVEINSTWIAEGFVK 705
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 10/318 (3%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY----LRPAFDL 188
F I Y+++ A K F ML+ P N L ++ + ++ L A +
Sbjct: 258 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMP-----NNPLYTVLINGHFKAGNLMEALSI 312
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F+ H GVLP+ ++ + + NG + A +F+++ E+G++PDV +Y L+ G C+
Sbjct: 313 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 372
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ +V +A +L ++M KG P+ Y L++ LC+ ++ A KL M KG PD V
Sbjct: 373 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y+T++ G+C+ +A + +MPS G P+ Y LV G C +G + A + M+
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
KGF+ S + LI G+C K+ EA + +E++ P T+ ++ C +ME
Sbjct: 493 QKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 551
Query: 429 KLGEVLNEIVKVEIKGDT 446
+ + E+ + + DT
Sbjct: 552 EANLLFKEMQERNLIVDT 569
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 1/236 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ N +YN+++ C G + A + M G P+ ++ +L++G CR+ + RA
Sbjct: 75 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 134
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++LL++M + VP +SY ++N LC K L A KLL +M G P++V Y+T+++G
Sbjct: 135 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 194
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ EGR +A ++L+ M +G P++ Y ++ L G + A Y+ + +G P
Sbjct: 195 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 254
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKL 430
A I G+ GK+ EA +E+L G P+ + V+I AG ME L
Sbjct: 255 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 310
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 4/324 (1%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
I D++++ P+ + LI + ++A + + M+ CKP + ++E
Sbjct: 67 IKDVMVSCG---IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
N R A +L K ++P+ SY M+ C D+S+A L KM G+
Sbjct: 124 GYCREHNMGR-ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P+V Y L+ G + ++ A LL+ M G PD Y +++ L + K+ EA
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L ++ +G PD V + +LG+ + G+ +A K ++M +G +PN Y L+ G
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A + + + G P A I G G+V EA V EL + G P T
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362
Query: 414 WVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ C E+EK E+ +E+
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEM 386
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 162/377 (42%), Gaps = 40/377 (10%)
Query: 64 RVQ---KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
RVQ K+ + + L ++F Y+S F K F L D++ +
Sbjct: 340 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV----------EKAFELHDEMCLK 389
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ P++F Y L+ +S RA K F M E +P + +++
Sbjct: 390 ------GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 443
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N + AF LF GV P++ YN ++ C GD+ A LF +M ++G + S
Sbjct: 444 EN-VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-S 501
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA-------- 290
+ L+ G C+ ++ A L ++M+ K +PD ++YTT+++ C+ K+ EA
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Query: 291 ---------YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
+ L +M KG PD V Y V+ C+E ++A K+ +++ G L
Sbjct: 562 ERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+ L+ LC + A K + M G P + L++ F GK+DEA V E
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681
Query: 402 LLKAGEAPHEDTWVMIV 418
+ G P T + +V
Sbjct: 682 VKSLGLVPDTTTLIDLV 698
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 128/251 (50%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++PNT +Y I+ C ++ A F +M + G+ PD + L+ G R+ ++
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ + + M++ G + ++Y L++ LC+ K+ +A ++L M GC P+ + ++ G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+CRE A ++L++M +P+ VSY ++ GLC +A K ++ M G P+
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
V LI G+ + G+++EA +L+ + +G AP + I+ + +ME+ L
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244
Query: 436 EIVKVEIKGDT 446
EI +K D
Sbjct: 245 EIQGRGLKPDA 255
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV P+ YN ++ G + A T ++ RG+ PD ++ + G + ++ A
Sbjct: 215 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 274
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++ML+ G +P+ YT L+N + L EA + + G PD+ + + G
Sbjct: 275 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 334
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ GR +A KV ++ G +P++ +Y +L+ G C QG + A + M KG +P+
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ +AL+ G C G + A + + + + G P T+ ++ C E + + + +
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 454
Query: 436 EI 437
E+
Sbjct: 455 EM 456
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M KG VP+T +YT + LCR K++ EA M+ G PD + ++ GF REG
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ ++ + M S G NL++Y L+ GLC G + A + ++ MI+ G P+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
LI+G+C + A +L+E+ K P ++ ++ +C
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 161
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY---- 181
V P F Y L+ + ++A+ FR ML+ K L Y
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-------KGFATTLSFNTLIDGYCKSC 513
Query: 182 -LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA-----------------YTL 223
++ A LF+ ++P+ +Y ++ C G + A + L
Sbjct: 514 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFAL 573
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F KM +GV PD +Y +++ C++ + A L ++++ KG + + L+ +LC+
Sbjct: 574 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 633
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ L EA KLL M G P + +T+V F G+ +A +V E + S G +P+ +
Sbjct: 634 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 693
Query: 344 YRTLVGG 350
LV G
Sbjct: 694 LIDLVNG 700
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M KG P+ Y + G CR R +A E+M G P+ + L+ G +G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D + +M+S G + + LI G C GK+++A +L+ ++ G P+ T+ +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ C M + E+L+E+ K
Sbjct: 121 LIEGYCREHNMGRALELLDEMEK 143
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G +PN +Y + GLC + AK + M G P ++ ALI GF G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+DE + + ++ G + T+ +++ +C +MEK E+L ++ + K ++R
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 116
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 205/409 (50%), Gaps = 26/409 (6%)
Query: 61 SPCRVQK-LIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDI- 117
+P ++Q L+ Q+D +L+ + F++ + PN H+ T+ L+ L + + F I
Sbjct: 67 TPFKIQHILLKLQNDAVLSLKFFNWVQTHNPN-SHTLHTHSFLLHILTKNRNFKTAQSIF 125
Query: 118 --LITLKSEHYPV----------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP 165
+IT S + +P +F L K +A N A TF M E+ P
Sbjct: 126 SKIITTNSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTV 185
Query: 166 KQLNRILELLVTHRNYL-RPAF--DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
+ N L ++ YL RP ++ ++ + PN + N+++ A+C G+++ A
Sbjct: 186 ESCNAFLSSML----YLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASE 241
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSL 281
+ KM + G+ P+V ++ L+ G C K + A+ + + M+ K G P+ +++ TL+N
Sbjct: 242 VLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGF 301
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ KL EA ++ MK+ P++V YNT++ GF + G + + E+M N ++
Sbjct: 302 CKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADI 361
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLE 400
++Y L+ GLC +G A YM + KG P+ S ALI G C + A V
Sbjct: 362 LTYNGLILGLCKEGKTKKA-AYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYR 420
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
++++G +P+E+T+ M+ C E+ + +VL ++++ + D+ I+
Sbjct: 421 SMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSIL 469
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K+GV PN ++N ++ FC G + A +F++M V P+V +Y L+ G +
Sbjct: 284 KNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSE 343
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+ L E+M D L+Y L+ LC++ K ++A ++ + P+ ++ ++
Sbjct: 344 MGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALI 403
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C + A V M +G PN ++R L C FD A + ++ M+ + +
Sbjct: 404 AGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMT 463
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEEL 402
P S+ + G C G+ A + E+
Sbjct: 464 PDSSILSEVYSGLCRCGRKQFALMLCSEI 492
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +F V PN +YN ++ F G+ + LF +M V D+ +Y
Sbjct: 307 LHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNG 366
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ + +A +++++ VP+ +++ L+ C + A+ + M G
Sbjct: 367 LILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSG 426
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+P+ + + FC+ A +VL DM P+ + GLC G
Sbjct: 427 FSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCG 480
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ ++ V + +YN ++ C G A + ++ + ++P+ ++ L+ G C
Sbjct: 348 LFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQC 407
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ RA + M+ GF P+ ++ L ++ C+ + A ++L M + PD
Sbjct: 408 VRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSS 467
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+ V G CR GR A + ++ + LP
Sbjct: 468 ILSEVYSGLCRCGRKQFALMLCSEIEAKRLLP 499
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
KY + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 KYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + ++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
K + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF + ++PN ++ ++ C NG + +A ++ +M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 174/367 (47%), Gaps = 2/367 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA F +A +Q F++S +Y LI LG+ K F++I +++ +K + + F +
Sbjct: 21 LALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGL-LNKETFALI 79
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ YA + A+ F M +F K +NR+L+ L R R +F +K G
Sbjct: 80 SRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQL-VFDKMNKRG 138
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ + KSY I++ + ++S ++N+M + G PDV +Y IL+ C+ + + A+
Sbjct: 139 FVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAI 198
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L +M K P Y TL+N L +K+L EA + K G P+ YN VV +
Sbjct: 199 ELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAY 258
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D + +++M G P+ +Y ++ L G +A Q M +G P
Sbjct: 259 CWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSV 318
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S +++ FCN +VD A V +++ G P + ++ +C ++++ E
Sbjct: 319 STYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQE 378
Query: 437 IVKVEIK 443
++ V I+
Sbjct: 379 MLDVGIR 385
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 113/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + +LM+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ M + + PD+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + + +L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 164/320 (51%), Gaps = 3/320 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ TY ++ + +S A++ R M E N K + + I++ L L AF+
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD-GSLDNAFN 284
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G + +YN ++ FC G L M +R + P+V ++ +L+
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A LL++M+ +G P+T++Y +L++ C++ +L EA +++ M KGC+PDI+
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ G+C+ R D ++ +M G + N V+Y TLV G C G +VAKK Q M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S+ P L+ G C+ G++++A + ++ K+ +++I+ +C ++
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 428 EKLGEVLNEIVKVEIKGDTR 447
+ ++ + +K D R
Sbjct: 525 DDAWDLFCSLPLKGVKLDAR 544
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 144/264 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + + + + Y+I++ C +G + A+ LFN+M +G D+ +Y L+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + + LL DM+ + P+ ++++ L++S ++ KLREA +LL M +G P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN+++ GFC+E R +A ++++ M S GC P+++++ L+ G C D +
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M +G + + L++GFC GK++ A + +E++ P ++ +++ +C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
E+EK E+ +I K +++ D I
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGI 510
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 136/257 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF K G P+T +N ++ C +S A L ++M E G P + +
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC +V+ AV L++ M+ GF P+ ++Y +LN +C+ + A +LL +M+ +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y+ ++ G C++G +A + +M G ++++Y TL+GG C+ G +D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K ++ MI + SP+ LI F GK+ EA +L+E+++ G AP+ T+ ++
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 422 CAGEEMEKLGEVLNEIV 438
C +E+ ++++ ++
Sbjct: 379 CKENRLEEAIQMVDLMI 395
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 5/303 (1%)
Query: 146 PDRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
D A+ FR M++ +PLP NR+ + + Y L K G+ + +
Sbjct: 69 ADDAVDLFRDMIQ--SRPLPTVIDFNRLFSAIAKTKQY-ELVLALCKQMESKGIAHSIYT 125
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+IM+ FC +S A++ K+ + G PD + L+ GLC + +V+ A++L++ M+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G P ++ TL+N LC K+ +A L+ RM G P+ V Y V+ C+ G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A ++L M + V Y ++ GLC G D A M KGF + LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFCN G+ D+ +L +++K +P+ T+ +++ ++ + ++L E+++ I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 444 GDT 446
+T
Sbjct: 366 PNT 368
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 1/323 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI + + D K R M++ P + +++ V LR A L K
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE-GKLREADQLLKEM 359
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PNT +YN ++ FC + A + + M +G PD+ ++ IL+ G C+ +++
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ ++L +M +G + +T++Y TL+ C+ KL A KL M + PDIV Y +
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G A ++ + + ++ Y ++ G+C+ D A + KG
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ +I C + +A + ++ + G AP E T+ +++ ++ E
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 433 VLNEIVKVEIKGDTRIVEAGIGL 455
++ E+ D V+ I +
Sbjct: 600 LIEEMKSSGFPADVSTVKMVINM 622
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 3/300 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ T+ LI + + A + + M++ P N +++ N L A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE-NRLEEA 387
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G P+ ++NI++ +C I LF +M RGV+ + +Y L+QG
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++ A L ++M+++ PD +SY LL+ LC +L +A ++ +++ D
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I Y ++ G C + DA + +P G + +Y ++ LC + A +
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G +P + LI+ A ++EE+ +G T M++ + +GE
Sbjct: 568 KMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ + AVDL DM+ +P + + L +++ + K+ L +M+ KG I +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR + A + + G P+ V + TL+ GLC + A + + M+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P + L+ G C GKV +A +++ +++ G P+E T+ ++ +C +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 431 GEVLNEIVKVEIKGDT 446
E+L ++ + IK D
Sbjct: 248 MELLRKMEERNIKLDA 263
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 168/316 (53%), Gaps = 3/316 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ + DP + + S++ +++ + S Y ++I K G+AK + I++++ T
Sbjct: 61 APNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRT 120
Query: 121 LKSEHY-PVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K E + F L++IY + +RA++ M +F C P K N IL LLV+
Sbjct: 121 IKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSA 180
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + +F SA K GV + NI+++ C +G++ A L ++ ++ P+V +
Sbjct: 181 KLF-DEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMT 239
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L++G C K + A LLE M + PDT+++ L++ L +K ++ E LL RMK
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
VKGC P+ Y V+ G + R ++A +++ M S G P+ +SY+ +V GLC+
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVV 359
Query: 359 VAKKYMQLMISKGFSP 374
++ M++ GF P
Sbjct: 360 EMDWVLRQMVNHGFVP 375
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++NRA+++L M + G P + S+ +LN L K E +K+ G D N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G C G A ++L++ P PN++++ L+ G C++G F+ A K ++ M +
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P + LI G G+V+E +LE + G P+ T+
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY 310
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVVLGFCREGRA 322
K + P Y ++N + K E +++ +K+ K C + YN + + GR
Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRI 148
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A ++L MP GC P+ S+ ++ L +FD K G + L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
IKG C G ++ A +L+E + P+ T+ ++ C + E+ ++L + K I
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 443 KGDT 446
+ DT
Sbjct: 269 EPDT 272
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ LI+ + + A K M + +P N ++ L + + DL +
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL-RKKGRVEEGIDLLERM 298
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN +Y ++ A + ++M G+ P SY+ ++ GLC V
Sbjct: 299 KVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+L M+N GFVP TL + ++ + K
Sbjct: 359 VEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSK 390
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY LI++ + AL ML C+P +LE + + +
Sbjct: 137 PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF-EQ 195
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + G PN +YN+++ C G + A L N++F G PD SY L++
Sbjct: 196 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLK 255
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSY------------------------------ 274
GLC + + +L +M+ K +P+ +++
Sbjct: 256 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315
Query: 275 -TTL----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
TTL +NS+C++ ++ +A+K L M GCNPD + Y TV+ G CR R DA ++L
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
++M N C PN V++ T + LC +G+ + A ++ M G + +AL+ GFC
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G +D A LE P+ T+ ++ +C E ++ E++ E++
Sbjct: 436 GHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEML 481
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 170/361 (47%), Gaps = 8/361 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY ++I + R D+L L S Y P +Y L+K S D + F
Sbjct: 214 TYNVIINGMCREGRVDDARDLLNRLFS--YGCQPDTVSYTTLLKGLCASKRWDDVEELFA 271
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E NC P + ++ + A + + +H NT NI++ + C
Sbjct: 272 EMMEKNCMPNEVTFDMLIRFFC-RGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQ 330
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A+ N M G PD SY +++GLCR + N A +LL++M+ P+ +++
Sbjct: 331 GRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTF 390
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T + LC+K + +A L+ +M+ GC +V YN +V GFC +G A ++ MP
Sbjct: 391 NTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP- 449
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
C PN ++Y TL+ GLC+ D A + + M+ + P+ + L+ FC G +DE
Sbjct: 450 --CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDE 507
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
A ++E++++ G P+ T+ + I E E+L+ +V + D + IG
Sbjct: 508 AIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 567
Query: 455 L 455
+
Sbjct: 568 I 568
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 182/408 (44%), Gaps = 30/408 (7%)
Query: 21 TFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKE 80
TFP P + +++ ESP+ +P + R+++LIA + A+
Sbjct: 15 TFPNPKPHHLAAAAATRPESPNV-------------APNPASARLRRLIAREDLAGAARL 61
Query: 81 IFDYASRQPNFRHSNSTYLI--LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ ASR + YL LI L R S +L + PV + L+
Sbjct: 62 VELSASRDG---EAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVA 118
Query: 139 IYAESNLPDRALKTFRSML----EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
Y D A + SM + PL + L R + A L +
Sbjct: 119 GYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVL--------CDRGRVADALSLLDDMLR 170
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PN +Y +++ A C N A + ++M +G P++ +Y +++ G+CR+ +V+
Sbjct: 171 RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 230
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A DLL + + G PDT+SYTTLL LC K+ + +L M K C P+ V ++ ++
Sbjct: 231 ARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 290
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
FCR G A +VL+ M + C N ++ +C QG D A K++ M S G +P
Sbjct: 291 FFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNP 350
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++KG C + ++A +L+E+++ P+E T+ + +C
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILC 398
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 136/268 (50%), Gaps = 3/268 (1%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R A + ++A G + +YN ++ +C G + A L M V PD +
Sbjct: 88 RGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYT 144
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L++ LC + +V A+ LL+DML +G P+ ++YT LL ++C+ +A +L M+
Sbjct: 145 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR 204
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KGC P+IV YN ++ G CREGR DA +L + S GC P+ VSY TL+ GLC +D
Sbjct: 205 AKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWD 264
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ M+ K P+ LI+ FC G V+ A VL+++ + A + +++
Sbjct: 265 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVI 324
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
IC ++ + LN + DT
Sbjct: 325 NSICKQGRVDDAFKFLNNMGSYGCNPDT 352
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 129/243 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y ++R C G ++ A +L + M RG P+V +Y +L++ +C+ S +A+
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L++M KG P+ ++Y ++N +CR+ ++ +A LL R+ GC PD V Y T++ G
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D ++ +M C+PN V++ L+ C GM + A + +Q M + +
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
++ + +I C G+VD+A L + G P ++ ++ +C E E+L E
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377
Query: 437 IVK 439
+V+
Sbjct: 378 MVR 380
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 143/286 (50%), Gaps = 4/286 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T ++K + + A + + M+ NC P N + +L + + A L +
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILC-QKGLIEQAIMLIEQM 413
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+HG +YN ++ FC G I A LF M P+ +Y L+ GLC ++
Sbjct: 414 QEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERL 470
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L+ +ML++ P+ +++ L+N C+K L EA +L+ +M GC P+++ YNT+
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL 530
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
G ++ + DA ++L + S G P+++++ +++G L + + A + L G
Sbjct: 531 FDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGM 590
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P V + ++ G C ++D A L ++ G P+E T+++++
Sbjct: 591 RPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 4/342 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ +LI R +L + +L +I + D A K +M
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ C P +L+ L + A +L K ++ PN ++N + C G
Sbjct: 344 GSYGCNPDTISYTTVLKGLCRAERW-NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A L +M E G V +Y L+ G C + ++ A++L M K P+T++YTT
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTT 459
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL LC ++L A +L+ M + C P++V +N +V FC++G +A +++E M +G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C PNL++Y TL G+ + A + + ++SKG SP ++I +V+EA
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ G P + I+ +C E++ + L +V
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMV 621
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 3/258 (1%)
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
SA + G P+ ++R C G S A + G DV +Y L+ G CR
Sbjct: 65 SASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYG 124
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ A L+ M PD +YT L+ LC + ++ +A LL M +GC P++V Y
Sbjct: 125 HLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYT 181
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ C+ A VL++M + GC PN+V+Y ++ G+C +G D A+ + + S
Sbjct: 182 VLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSY 241
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P L+KG C + D+ + E+++ P+E T+ M++ C G +E+
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301
Query: 431 GEVLNEIVKVEIKGDTRI 448
+VL ++ + E +T +
Sbjct: 302 IQVLQQMTEHECATNTTL 319
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 6/257 (2%)
Query: 117 ILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
I++ + + + T + TY L+ + D AL+ FRSM CKP +L
Sbjct: 407 IMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTG 463
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L L A +L PN ++N+++ FC G + A L +M E G P
Sbjct: 464 LCNAER-LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
++ +Y L G+ + A++LL +++KG PD +++++++ L ++ ++ EA ++
Sbjct: 523 NLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMF 582
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+ G P + YN ++LG C+ +A L M SNGC+PN +Y L+ GL +
Sbjct: 583 HLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLARE 642
Query: 355 GMFDVAKKYMQLMISKG 371
G+ A+ + ++ S+G
Sbjct: 643 GLLKEAQDLLSMLCSRG 659
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 144/310 (46%), Gaps = 4/310 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA+ ++ ++L + + P F I I + L ++A+ M
Sbjct: 354 SYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 413
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C N ++ + ++ A +LF+S PNT +Y ++ C
Sbjct: 414 QEHGCTVGVVTYNALVNGFCV-QGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAER 469
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M R P+V ++ +L+ C+K ++ A++L+E M+ G P+ ++Y T
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L + + + +A +LL + KG +PD++ +++++ +E R +A ++ G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P + Y ++ GLC + D A ++ M+S G P+ S LI+G G + EA
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQ 649
Query: 397 GVLEELLKAG 406
+L L G
Sbjct: 650 DLLSMLCSRG 659
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 84/229 (36%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F +PN TY L+ L A+ +++ + P F L+
Sbjct: 441 ALELFRSMPCKPN----TITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI-------------LELL--------- 175
+ + D A++ M+E C P N + LELL
Sbjct: 497 NFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVS 556
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + + A +F A G+ P YN ++ C +I A
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDF 616
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
M G MP+ +Y IL++GL R+ + A DLL + ++G V L
Sbjct: 617 LAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNL 665
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 177/353 (50%), Gaps = 2/353 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
+ H+ S L +I ++++F+ + +SE L+ +I Y +S D ++
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSI 114
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M++ P N +L +V ++ + F + K V+ + S+ I+++
Sbjct: 115 YYFNEMVDKGFVPGSNCFNNLLTFVVGSSSF--NQWWCFFNESKIKVVLDVYSFGIVIKG 172
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G+I ++ L ++ E G P+V Y L+ G C+K ++ +A DL +M G V +
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVAN 232
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT L++ L + ++ +++ +M+ G P++ YN V+ C++GR DA KV +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFD 292
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G N+V+Y TL+GGLC + + A + M M S G +P+ + LI GFC V
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVR 352
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
K+ +A + +L G +P T+ ++V C + G+V+ E+ + IK
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 155/307 (50%), Gaps = 1/307 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D+L+ L+ + ++T LI + ++A F M +F ++ L
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + F++++ +HGV PN +YN +M C +G A+ +F++M ERGV +
Sbjct: 244 FKN-GIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y L+ GLCR+ + N A ++++ M + G P+ ++Y TL++ C +KL +A L
Sbjct: 303 IVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCR 362
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+K +G +P +V YN +V GFC++G A KV+++M G P+ V+Y L+
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
+ A + M G +P LI GFC G+++EA + + +++ P+E +
Sbjct: 423 NMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482
Query: 416 MIVPQIC 422
+V C
Sbjct: 483 TMVLGYC 489
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 6/261 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A DLF K G++ N +Y +++ NG + ++ KM E GV P++ +Y
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNC 273
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M LC+ + A + ++M +G + ++Y TL+ LCR+ K EA +++ +MK G
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG 333
Query: 302 CNPDIVHYNTVVLGFC---REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
NP+++ YNT++ GFC + G+A+ C+ D+ S G P+LV+Y LV G C +G
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCR---DLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ M +G P LI F +++A + + + G P T+ +++
Sbjct: 391 GAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
C M + + +V+
Sbjct: 451 HGFCIKGRMNEASRLFKSMVE 471
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ P+ +YNI++ FC GD S A + +M ERG+ P +Y I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ R + +A+ L M G PD +Y+ L++ C K ++ EA +L M K
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YNT+VLG+C+EG + A ++ +M PN+ SYR ++ LC + A+
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533
Query: 362 KYMQLMISKGFSPHFSV 378
++ MI G P S+
Sbjct: 534 GLVEKMIDSGIGPSDSI 550
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 7/300 (2%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH- 178
K + + V P+L TY ++ + A K F M E N ++ L
Sbjct: 258 KMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 179 -RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
N D KS G+ PN +YN ++ FC + A +L + RG+ P +
Sbjct: 318 KANEANEVMDQMKS---DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLV 374
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ G C+K + A ++++M +G P ++YT L+++ R + +A +L M
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM 434
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ G PD+ Y+ ++ GFC +GR +A ++ + M PN V Y T+V G C +G
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + + M K P+ + +I+ C K EA G++E+++ +G P + +I
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 MRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A ++L +ML+ G VP+ +++TTL++ C+ K+ A ++ +M +G
Sbjct: 212 LINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G CR G A ++E+M G P+ ++Y TL+ G C +G ++
Sbjct: 272 FLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 ELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C +++ ++L E+
Sbjct: 392 CKTGDVKTASKLLREM 407
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + +YF L+ + YP + F L+ + + A F ++ +++ +P
Sbjct: 111 LMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A +
Sbjct: 171 VVSFNTLMNGYIRLGD-LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEML 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
N+M + G++P+ ++ L+ G C+ +V+ A+++ + ML++GF+PD ++Y TL+ LCR+
Sbjct: 230 NEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRR 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L +A L+ M +KG PD + Y T++ G C+EG ++ + M + V+Y
Sbjct: 290 GDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M++ G P ++ FC G V A +L E+ +
Sbjct: 350 TALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQR 409
Query: 405 AGEAP 409
G P
Sbjct: 410 NGPVP 414
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 35/194 (18%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ +G++PN ++ ++ C NG + +A ++ +M +G +PD+ +Y L+
Sbjct: 225 ANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIY 284
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL-------------------------- 278
GLCR+ + +A DL+E+M+ KG PD ++YTTL+
Sbjct: 285 GLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRL 344
Query: 279 ---------NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ LCR+ + +A K+L M G PD Y ++ FC+ G A K+L
Sbjct: 345 DEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLL 404
Query: 330 EDMPSNGCLPNLVS 343
+M NG +P +V+
Sbjct: 405 REMQRNGPVPGVVT 418
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 1/285 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +L+ P KQ N ++ ++ L A ++F + GV P ++N +M C
Sbjct: 232 YLQLLDAGVPPEAKQFNMLMRDMI-RSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMC 290
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
D++ A L M + GV PDV +Y MQGLC+ ++ AV++ E+M +G P+T+
Sbjct: 291 KASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTV 350
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+TTL+++ C++ + +L M +G D+V YN + G CR A ++E+M
Sbjct: 351 VFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM 410
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+NG P+ V+Y TL+ G C +G D+A + Q M +G + LI G G+
Sbjct: 411 RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRS 470
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ +L E+++AG P T+ M++ C +++ ++L E+
Sbjct: 471 VDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEM 515
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 127/241 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A ++F+ + GV PNT + ++ A C G+++ L +M RG+ D+ +Y
Sbjct: 330 IQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNA 389
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L GLCR + A D++E+M N G PD ++YTTL++ C++ +L A ++ M +G
Sbjct: 390 LANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEG 449
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y T++ G + GR++D+ ++L +M G P+ +Y ++ C
Sbjct: 450 VALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGF 509
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K ++ M +KG P + ++ GFC +G++ A +L +L G P + T+ +++
Sbjct: 510 KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569
Query: 422 C 422
C
Sbjct: 570 C 570
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV P K +N++MR +G ++ A +F++M RGV P V ++ LM G+C+ S +N A
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L M G PD +Y + LC+ ++++A ++ M+ +G NP+ V + T++
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+EG ++ +M + G +LV+Y L GLC A ++ M + G P
Sbjct: 359 HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPD 418
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI GFC G++D A + +E+ G A E T+ ++ + +L
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILC 478
Query: 436 EIVKVEIKGD----TRIVEA 451
E+++ ++ D T +++A
Sbjct: 479 EMMEAGLEPDNTTYTMVIDA 498
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 7/280 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY ++ ++ A++ F M E P +++ N +
Sbjct: 310 VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN-VAAG 368
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G+ + +YN + C D+ A + +M G+ PD +Y L+ G
Sbjct: 369 LELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDG 428
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ +++ A+++ ++M ++G D ++YTTL++ L + + ++ ++LC M G PD
Sbjct: 429 FCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPD 488
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y V+ FC+ K+L++M + G P +V+Y ++ G C G A +
Sbjct: 489 NTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLN 548
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
M++ G P + L+ G C GKV +A EEL A
Sbjct: 549 AMLNIGVCPDDITYNILLDGHCKHGKVRDA----EELKSA 584
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 12/226 (5%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
CRV+ L A+ + +E+ R + TY LI + + ++ +
Sbjct: 395 CRVRDLKAAND---IVEEM-----RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
E + +T LI ++S + + M+E +P +++ + + +
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSD-V 505
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ F L K G P +YN++M FC G + A L N M GV PD +Y IL
Sbjct: 506 KTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNIL 565
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ G C+ +V A +L KG V D YT+L+N +KK +
Sbjct: 566 LDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKKKSTK 608
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 9/340 (2%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P LA + F +A Q +RH S Y +++ + +L + + PV+ F
Sbjct: 162 PRLAYKFFLWAEEQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFH 221
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + L R ++ F FN +P N IL L+T Y L + H+
Sbjct: 222 LLVCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQY-----SLIEWVHQ 276
Query: 195 ----HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G P+ +YN++MRA + + L ++M + G+ PD+ +Y +L+ L +
Sbjct: 277 KMIAEGHSPDVLTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGD 336
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A++LL M + G VP L +T L++ L R L M KGC PD+V Y
Sbjct: 337 KPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYT 396
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G+ G +A K +DM G LPN+ +Y +++ GLC G FD A ++ M S+
Sbjct: 397 VMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESR 456
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G +P+F+V L+ N GK EA +++ + G H
Sbjct: 457 GCTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLH 496
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 123/298 (41%), Gaps = 36/298 (12%)
Query: 176 VTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V Y R A+ F A + G T YN++++ F G++ + L M ++G+
Sbjct: 156 VNRARYPRLAYKFFLWAEEQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPV 215
Query: 235 DVESYRILMQGLCRKSQVNRAVDLL----------------------------------- 259
++ +L+ R R V+
Sbjct: 216 SSRTFHLLVCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVH 275
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M+ +G PD L+Y ++ + +KL + +KLL M G PD+ YN ++ +
Sbjct: 276 QKMIAEGHSPDVLTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKG 335
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ + A +L M GC+P ++ + L+ GL G + K + M+ KG P
Sbjct: 336 DKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCY 395
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I G+ G+ DEA +++L G+ P+ T+ ++ +C E +K +L ++
Sbjct: 396 TVMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDM 453
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 9/258 (3%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
N+R +++ ++ L + +SLI+ + + +E + +P + TY + + A+ L R
Sbjct: 247 NYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGH--SPDVLTYNVVMRAKYML--RK 302
Query: 150 LKTFRSMLEFNCK----PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
L F +L+ K P N +L +L L A +L G +P +
Sbjct: 303 LDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPL-AALNLLNYMSDVGCVPTVLHFT 361
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ G++ F++M ++G PDV Y +++ G + + A +DML +
Sbjct: 362 NLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLR 421
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G +P+ +Y +++ LC + +A LL M+ +GC P+ Y+T+V G+ +A
Sbjct: 422 GQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEA 481
Query: 326 CKVLEDMPSNGCLPNLVS 343
+++ M + G +L+S
Sbjct: 482 NNIIQYMTNKGHYLHLLS 499
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 1/281 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ +F ML P + IL LV +++YL LFK +GV PN + NI++
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYL-TVISLFKQFQSNGVTPNLCTLNILI 135
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC I+ A+++F + +RG PD + L++GLC ++ RA+ + ++ +GF
Sbjct: 136 NCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQ 195
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +SY TL+N LC+ + + +LL +++ PD+V Y T++ C+ R DAC +
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M G PN+ +Y TL+ G C G A + M K +P + LI
Sbjct: 256 YSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGK 315
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
GK+DEA + EE+ P+ T+ ++ +C +E+
Sbjct: 316 EGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLER 356
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A DL+ G+ PN +YN ++ FC G++ A++L N+M + + PDV ++ IL+
Sbjct: 252 ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILID 311
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L ++ +++ A+ L E+M +K P+ ++YT+L++ LC+ L A L +MK +G P
Sbjct: 312 ALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 371
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ Y ++ C+ GR +A + + + G N+ +Y ++ GLC G+F
Sbjct: 372 DVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLK 431
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M KG P +I + D+A L E++ G
Sbjct: 432 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 158/395 (40%), Gaps = 92/395 (23%)
Query: 115 DDILITL-KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
D+IL +L K++HY SLF +SN L T ++ C
Sbjct: 97 DNILSSLVKNKHYLTVISLFKQF-----QSNGVTPNLCTLNILINCFC------------ 139
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-- 231
H ++ AF +F + K G P+ + N +++ CF G+I A +K+ +G
Sbjct: 140 ----HLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQ 195
Query: 232 ---------------------------------VMPDVESYRILMQGLCRKSQVNRAVDL 258
V PDV Y ++ LC+ +V A DL
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+M+ KG P+ +Y TL+ C L+EA+ LL MK+K NPD+ +N ++ +
Sbjct: 256 YSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGK 315
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ------------------------ 354
EG+ +A + E+M PN+V+Y +L+ GLC
Sbjct: 316 EGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 375
Query: 355 -----------GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
G + AK++ Q ++ KG+ + + +I G C G + + ++
Sbjct: 376 YTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKME 435
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G P T+ I+ + +E +K + L E++
Sbjct: 436 GKGCMPDAITFKTIICALFEKDENDKAEKFLREMI 470
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 106/191 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ AF L + P+ ++NI++ A G I A +LF +M + + P++ +Y
Sbjct: 284 LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + RA+ L + M +G PD SYT LL++LC+ +L A + + VKG
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ ++ YN ++ G C+ G D + M GC+P+ ++++T++ L ++ D A+
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 463
Query: 362 KYMQLMISKGF 372
K+++ MI++G
Sbjct: 464 KFLREMIARGL 474
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
++P++FTY IY NL + A M N P N +++ L +
Sbjct: 264 ISPNVFTYNTLIYGFCIMGNLKE-AFSLLNEMKLKNINPDVYTFNILIDAL-GKEGKIDE 321
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ + PN +Y ++ C N + A L KM E+G+ PDV SY IL+
Sbjct: 322 AISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLD 381
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ ++ A + +L KG+ + +Y ++N LC+ + L +M+ KGC P
Sbjct: 382 ALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMP 441
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
D + + T++ + A K L +M + G L
Sbjct: 442 DAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 94/227 (41%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A FN+M P + ++ L + + L + + G P+ + L+N
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C + A+ + + +G +PD + NT++ G C G A + + + G
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ VSY TL+ GLC G + ++ + P + +I C +V +AC +
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E++ G +P+ T+ ++ C +++ +LNE+ I D
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDV 303
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 167/328 (50%), Gaps = 30/328 (9%)
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNY----------- 181
++ ++ AE PD + T+ +++ CK + + R LELL VT R +
Sbjct: 166 FMEQMVAEGCHPD--IITYTALIGGFCKS--RDVGRGLELLGEVTRRGFTPDIVTYSTVI 221
Query: 182 --------LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
LR A D+F+ + P +YN ++ +C GD+ A L KM +
Sbjct: 222 DGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCA 278
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV +Y LM C+ +++ A +L + M+ PD +++T+L++ LC + ++ +A +L
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L + +GC P I YN VV G+C+ + A +++ D S G +PN V+Y LV G C
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVS-HALI-KGFCNVGKVDEACGVLEELLKAGEAPHE 411
G D A +Y+ + S+G SV+ +A+I C G+ D+A EE+++ G P
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVK 439
T+ +V +C + ++ E+L E++K
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIK 486
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P TY L+ +++ A++ + M+ P L +++ L + + A +
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG-DRVDDARE 95
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ N +Y+ ++ C + A L M ERG P V +Y ++ G C
Sbjct: 96 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC 155
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R +V+ A +E M+ +G PD ++YT L+ C+ + + +LL + +G PDIV
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV 215
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+TV+ G C+ GR DA + E+M C P ++Y +L+GG C G D A + + M
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +P L+ FC +G++D+A + ++++ +P T+ +V +C M
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 428 EKLGEVLNEIVK 439
E E+L EI +
Sbjct: 333 EDALELLEEITR 344
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 6/315 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H + + TY L+ + D A+ +M E C P N I+ R +
Sbjct: 102 HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR-V 160
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A + G P+ +Y ++ FC + D+ L ++ RG PD+ +Y +
Sbjct: 161 DEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTV 220
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ ++ AVD+ E+M P ++Y +L+ CR + EA +LL +M C
Sbjct: 221 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKC 277
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V Y T++ FC+ GR DA ++ + M +N P++V++ +LV GLC +G + A +
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ + +G P + ++ G+C +V +A ++ + G P+ T+ ++V C
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397
Query: 423 AGEEMEKLGEVLNEI 437
++ + L+++
Sbjct: 398 RAGRTDQALQYLDQL 412
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 10/310 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I L +A DI E P+ TY LI Y + D A++
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIF-----EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLG 270
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ C P ++ L A++LF+ + + P+ ++ ++ C
Sbjct: 271 KMVDDKCAPDVVTYTTLMSAFC-KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 329
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A L ++ RG P + +Y ++ G C+ +QV +A +L+ D ++GFVP+T++Y
Sbjct: 330 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTY 389
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
L+ CR + +A + L ++ +G C + Y ++ CR+GR DA + E+M
Sbjct: 390 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G +P ++ T+V LC A + ++ MI G +P A++ +C G +
Sbjct: 450 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 509
Query: 393 DEACGVLEEL 402
+A + EL
Sbjct: 510 QKADELASEL 519
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 120/239 (50%), Gaps = 1/239 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P T +N+++ C G + A ++ +M + PD +Y L+ GL + ++ AV +
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++M++ VPD + T ++ SLC ++ +A +L+ M +G + + Y+ +V G C+
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R +A ++E M GC P +V+Y +++ G C D A +M+ M+++G P
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
ALI GFC V +L E+ + G P T+ ++ +C + ++ E+
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P + +++ GLCR ++ A+ + M N PD L+YT L++ L + ++LR+A ++
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M PD VV C R DA +++E+M G N ++Y LV GLC
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
D A ++ M +G +P +++I GFC +VDEA G +E+++ G P T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++ C ++ + E+L E+ +
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTR 207
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
NP + +N V+ G CR GR A V M ++ P+ ++Y LV GL A +
Sbjct: 2 NPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+Q M+S P + +++ C +VD+A ++EE+L G A + T+ +V +C
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120
Query: 423 AGEEMEK 429
E +++
Sbjct: 121 KCERLDE 127
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 38/204 (18%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ + AL+ + C P N +++ N +R A +L
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC-KANQVRKAEELVADF 377
Query: 193 HKHGVLPNTKSYNIM-------------------------------------MRAFCFNG 215
G +PNT +YNI+ + A C +G
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
A + +M +RG +P ++ ++ LC+ Q +A +LLE+M+ G P +
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 276 TLLNSLCRKKKLREAYKLLCRMKV 299
++++ CR +++A +L +++
Sbjct: 498 AVVSAYCRAGMIQKADELASELRL 521
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 127/230 (55%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +Y ++ C I A +M RG+ PD Y ++ GLC++ +V A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E M+ + P+ ++Y TL+N LC+ ++ AY+L M KG P V YNT++ GFC+
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ + A V + M + C+PN+V+Y TL+ GL G A + + M+ KG +P+ +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
LI GFC V +VDEA +LE+++ G AP T+ +++ +C +++E
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE 236
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 150/309 (48%), Gaps = 7/309 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
TY ++ +L + K IDD L T++ + P F Y ++ + + A F
Sbjct: 11 TYGPIVERLCKTKR---IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ P N ++ L + A++LFK G +P SYN ++ FC
Sbjct: 68 EKMVKQRINPNVVTYNTLINGLCKAWR-IETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
D+ A +F+KM +P+V +Y L+ GL + +V A ++L+ M+ KG P+ +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ L++ C+ +++ EA+KLL +M +G P +V YN ++ CR + DA K+ M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
C P +V+Y TL+ LC D A + MI+KG P L G GKV
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306
Query: 394 EACGVLEEL 402
EA ++E++
Sbjct: 307 EAQELMEKM 315
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 126/243 (51%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ YN ++ C + A LF KM ++ + P+V +Y L+ GLC+ ++ A
Sbjct: 39 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 98
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L ++M KG+VP +SY TL++ C+KK L A + +M C P++V Y T++ G
Sbjct: 99 YELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 158
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ G+ A +VL+ M G PN+ +Y L+ G C D A K ++ M+++G +P
Sbjct: 159 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 218
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ L+ C K+++A + + + P T+ ++ +C ++++ +
Sbjct: 219 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 278
Query: 436 EIV 438
E++
Sbjct: 279 EMI 281
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 3/287 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P TY +++ ++ D AL T M KP N +L L + A
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK-VEEARL 65
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ K + PN +YN ++ C I AY LF +M +G +P SY L+ G C
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K + A D+ + M+ VP+ ++YTTL++ L + K++ A ++L M KG P++
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ GFC+ R +A K+LE M + G P +V+Y L+ LC + A K + M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ P + L++ C+ ++D A + E++ G P T+
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 292
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD L+Y ++ LC+ K++ +A + M +G PD YN V+ G C+E + +A +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
E M PN+V+Y TL+ GLC + A + + M KG+ P + LI GFC
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ A V ++++++ P+ T+ ++ + +++ EVL+ +VK
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK 177
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D + AK++FD R N + TY LI L ++ ++L + + VTP+
Sbjct: 127 KKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG--VTPN 183
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+ TY S L D K R + +++LE +VT
Sbjct: 184 VATY-------SCLIDGFCKVRRV----------DEAHKLLEQMVTQ------------- 213
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ P +YNI++ + C + A+ LF M +R P V +Y L++ LC Q
Sbjct: 214 ----GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 269
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ A L +M+ KG PD ++Y TL L R K+ EA +L+ +MK+ NP
Sbjct: 270 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 140/256 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 MRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S++N A +L +M+ G VP+ +++TTL++ C+ + A + M +G
Sbjct: 212 LINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAL 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 YYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C +++ ++L E+
Sbjct: 392 CKKGDVKTGSKLLKEM 407
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 1/303 (0%)
Query: 107 RAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+ KYF L+ + YP + F L+ + + A F + ++ +P
Sbjct: 113 KLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVV 172
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N ++ + + L F L + H GV P+ +Y++++ C ++ A LF +
Sbjct: 173 SFNTLMNGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGE 231
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G++P+ ++ L+ G C+ ++ A++ ++ML +GF PD ++Y TL+ LC+K
Sbjct: 232 MIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGD 291
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L++A L+ M +KG PD + Y T++ G C+EG A + M + V+Y
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTA 351
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ GLC +G A+K ++ M+S G P +I FC G V +L+E+ + G
Sbjct: 352 LISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDG 411
Query: 407 EAP 409
P
Sbjct: 412 HVP 414
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 1/314 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES AL+ FR E ++LE + + Y + + +K
Sbjct: 68 VFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLK-YFKLVWGFYKE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC G++ +A ++F+++ + G+ P V S+ LM G R
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A +L M G P+ V + T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ G A + ++M G P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + ++K + + ++ +C +
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAE 366
Query: 432 EVLNEIVKVEIKGD 445
++L E++ V +K D
Sbjct: 367 KMLREMLSVGLKPD 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C G I +A + +M +G PD+ +Y
Sbjct: 222 MNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL----------------------- 278
L+ GLC+K + +A DL+++M KG PD ++YTTL+
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKEN 341
Query: 279 ------------NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ LCR+ + +A K+L M G PD Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P +V+
Sbjct: 402 KLLKEMQRDGHVPCVVT 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++T++ ML P N ++ L + L+ A DL
Sbjct: 244 FTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCK-KGDLKQAQDLIDEM 302
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A +M + + D +Y L+ GLCR+ Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
A +L +ML+ G PD +YT ++N C+K ++ KLL M+ G P +V
Sbjct: 363 VDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVV 417
>gi|449446161|ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 162/337 (48%), Gaps = 7/337 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L + F ++ R N+RH+ ++Y I++ + F + +L + + YPVT F L
Sbjct: 133 LGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMIL 192
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY--LRPAFD-LFKSAH 193
I E+ L R ++ F FN +P N IL LV + Y + +D + H
Sbjct: 193 ICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDH 252
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
P+ +YN+++ + C G + + L ++M +G PD +Y IL+ L + +
Sbjct: 253 S----PDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPL 308
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++LL M GF P+ L +TTL+N L R L + GC PD+V Y ++
Sbjct: 309 AALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMI 368
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
F G+ A ++M G LPN+ +Y +++ G C G F A + M S+G
Sbjct: 369 TSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCR 428
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
P+F V L+ N GK+ EA V++++++ G+ H
Sbjct: 429 PNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAH 465
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 7/280 (2%)
Query: 68 LIASQSDPLLAKEIFD--YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
LI + + LAK + + S+ NFR +Y ++ L K + LI + + +
Sbjct: 192 LICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDD 251
Query: 126 YPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ +P + TY + +++ L D+ + M P N +L +L L
Sbjct: 252 H--SPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPL- 308
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +L + G PN + ++ G++ F+++ G +PDV Y +++
Sbjct: 309 AALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMI 368
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
Q +A ++M+ KG +P+ +Y +++ C K +EAY +L M+ +GC
Sbjct: 369 TSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCR 428
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
P+ + Y+T+V G+ +A KV++ M NG +L++
Sbjct: 429 PNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMT 468
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 5/345 (1%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P+ + F +A+ P F H + LIL L A+ F L+ +L L ++ LF
Sbjct: 94 PVPSLRFFLFAAALPGFTHLPESLLILAGSLAGARLFPLLRSLLSDLPRPA--LSRDLFP 151
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L + YA + LPD A++ F SM F P L+ +L ++H + A F+ +
Sbjct: 152 LLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLL-FTLSHNGLVEHAEAFFRESPI 210
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+ + K+Y I++ + A LF++M ERGV PDV +Y L+ LCR V
Sbjct: 211 QFDV-SAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVAL 269
Query: 255 AVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A + L+DM ++G PD +Y L S C K R A ++L RM+ + P++ YN V+
Sbjct: 270 AQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVI 329
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
C G +A +L +M + G P++ SY TL+ C + A + + M
Sbjct: 330 RLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCL 389
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P+ + ++K +G+VD A V + + K G P T+ +++
Sbjct: 390 PNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMI 434
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 162/356 (45%), Gaps = 40/356 (11%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRIL-ELLVTHRNYLRPAF 186
P++ TY I S L + A+ + ML+ P N ++ EL V R A
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR--FSTAL 435
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F HG L NT++YN +++ C GDI A LF KM + G +P V +Y L+ G
Sbjct: 436 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 495
Query: 247 CRKSQVNRAVDLL-----------------------------------EDMLNKGFVPDT 271
K VN A LL ++M+ G P+
Sbjct: 496 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 555
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SYTTL++ + K+ A LL RM+ GCNP++ YN V+ G +E R +A K+ +
Sbjct: 556 VSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 615
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G LPN+++Y TL+ GLC G A K M + P+ +LI G C GK
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
DEA +L+E+ + G AP E T+ ++ ++ +L +V V K + R
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 192/394 (48%), Gaps = 23/394 (5%)
Query: 46 QQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKL 105
Q + SS SP V +++A D + F + S++P ++H+ + ++ ++ +L
Sbjct: 101 QWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRL 160
Query: 106 GRAKYFSLIDDILITL------KSEHYPVTP------------SLF---TYLIKIYAESN 144
R + F+ D I I + + E V SL+ T LI++ A+
Sbjct: 161 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL-AKFE 219
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ + A ++ ML +P N ++ +L + + +R A + ++ + P+ +Y
Sbjct: 220 MVEGARNLYKQMLNSGIQPSLLTFNTLINIL-SKKGKVREAELILSQIFQYDLSPDVFTY 278
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ C N ++ +A+ +F++M + G P+ +Y L+ GLC + +V+ A+D+LE+M+
Sbjct: 279 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 338
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P +YT + +LC + EA +L+ RMK +GC P++ Y ++ G R G+
Sbjct: 339 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 398
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M G +PN V+Y L+ LC G F A K M G + + +IK
Sbjct: 399 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 458
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G C G +++A + E++LK G P T+ ++
Sbjct: 459 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 492
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 157/324 (48%), Gaps = 5/324 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI +L FS I ++ + +IK ++A+ F M
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPA--FDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
L+ P N ++ +T N A DL K ++G P+ +YN ++ F
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK---ENGCEPDEWTYNELVSGFSKW 533
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A F +M E G+ P+ SY L+ G + +V+ A+ LLE M G P+ SY
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
++N L ++ + EA K+ +M +G P+++ Y T++ G CR GR A K+ DM
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 653
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
CLPNL +Y +L+ GLC +G D A+ ++ M KG +P +LI GF +G++D
Sbjct: 654 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 713
Query: 395 ACGVLEELLKAGEAPHEDTWVMIV 418
A +L ++ G P+ T+ +++
Sbjct: 714 AFLLLRRMVDVGCKPNYRTYSVLL 737
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 25/341 (7%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
P +T LI +++ D AL M E C P + N ++ L + N A +
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL-SKENRFSEAEKI 612
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ G+LPN +Y ++ C NG A+ +F+ M +R +P++ +Y L+ GLC+
Sbjct: 613 CDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ + + A LL++M KG PD +++T+L++ ++ A+ LL RM GC P+
Sbjct: 673 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732
Query: 309 YNTVVLGFCREGRAID------------------------ACKVLEDMPSNGCLPNLVSY 344
Y+ ++ G +E ++ +L M GC P L +Y
Sbjct: 733 YSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
TLV GLC +G F A++ ++ M +GF P + ++L+ C +VD A + +
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 852
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G H + ++ +C ++E+ + + +++ E D
Sbjct: 853 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 893
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 3/296 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
Y ++P +FTY LI + + D A F M++ C P + ++ L + +
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC-NEGRV 326
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D+ + + G+ P +Y + + A C A L +M +RG P+V++Y L
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 386
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GL R ++ A+ L ML +G VP+T++Y L+N LC + A K+ M+ G
Sbjct: 387 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 446
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ YN ++ G C G A + E M G LP +V+Y TL+ G +G + A +
Sbjct: 447 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 506
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ LM G P + L+ GF GK++ A +E+++ G P+ ++ ++
Sbjct: 507 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLI 562
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 157/311 (50%), Gaps = 18/311 (5%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI Y + A + M E C+P N ++ + L A
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-SKWGKLESASF 541
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
F+ + G+ PN SY ++ +G + IA +L +M E G P+VESY ++ GL
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++++ + A + + M +G +P+ ++YTTL++ LCR + + A+K+ M+ + C P++
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G C+EG+A +A +L++M G P+ V++ +L+ G G D A ++ M
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE------APHE-DTWVMIVPQ 420
+ G P++ L+KG + + C +LEE + +PHE D IV
Sbjct: 722 VDVGCKPNYRTYSVLLKG------LQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSN 775
Query: 421 ICAGEEMEKLG 431
+ A M ++G
Sbjct: 776 LLA--RMSEIG 784
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 30/341 (8%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY L+ +++ + A F+ M+E P P +++ + + A
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH-SKDGKVDIALS 576
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G PN +SYN ++ S A + +KM E+G++P+V +Y L+ GLC
Sbjct: 577 LLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLC 636
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + A + DM + +P+ +Y++L+ LC++ K EA LL M+ KG PD V
Sbjct: 637 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEV 696
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM----------- 356
+ +++ GF GR A +L M GC PN +Y L+ GL + +
Sbjct: 697 TFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHE 756
Query: 357 -------------FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
F++ + M G P L+ G C G+ EA +++++
Sbjct: 757 AVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 816
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+ G P + + ++ C E++ ++ + I E KG
Sbjct: 817 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSI---EAKG 854
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 139/329 (42%), Gaps = 37/329 (11%)
Query: 97 TYLILILKL---GRAKY-FSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRAL 150
TY LI L GR ++ F + D+ E P+L+TY IY + D A
Sbjct: 627 TYTTLIDGLCRNGRTQFAFKIFHDM------EKRKCLPNLYTYSSLIYGLCQEGKADEAE 680
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M P +++ V + AF L + G PN ++Y+++++
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVV-LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739
Query: 211 F---CF---------------------NGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
C + + I L +M E G P +++Y L+ GL
Sbjct: 740 LQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGL 799
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CRK + A L++DM +GF PD Y +LL + C+ ++ A K+ ++ KG +
Sbjct: 800 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 859
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y ++ C+ G+ +A + ++M + + + LV GL +G D+ K + +
Sbjct: 860 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 919
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M SK F+P+ L + +GK E+
Sbjct: 920 MESKNFTPNIQTYVILGRELSRIGKSIES 948
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR-KSQVNRAVDLLEDM 262
Y I R F + +++ ++ N++ V + RILM CR + ++ R D L ++
Sbjct: 138 YWISKRPF-YKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEI 196
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
GF S TLL L + + + A L +M G P ++ +NT++ ++G+
Sbjct: 197 SGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKV 256
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + P++ +Y +L+ G C D+A M+ +G P+ L
Sbjct: 257 REAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL 316
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
I G CN G+VDEA +LEE+++ G P T+ + + +C
Sbjct: 317 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 33/329 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A K F M + C P + ++ L A
Sbjct: 623 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC-QEGKADEAEI 681
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K + G+ P+ ++ ++ F G I A+ L +M + G P+ +Y +L++GL
Sbjct: 682 LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQ 741
Query: 248 RK----------------------SQVNRAV--DLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++ VN + +LL M G P +Y+TL++ LCR
Sbjct: 742 KECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCR 801
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
K + EA +L+ MK +G PD Y ++++ C+ A K+ + + G +L
Sbjct: 802 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI 861
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
YR L+ LC G + A+ M+ K ++ V L+ G G++D +L +
Sbjct: 862 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 921
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ T+V++ G E+ ++G+
Sbjct: 922 SKNFTPNIQTYVIL------GRELSRIGK 944
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
PDR + + S+L +CK L V H A +F S G + Y
Sbjct: 822 PDREI--YYSLLIAHCKNLE----------VDH------ALKIFHSIEAKGFQLHLSIYR 863
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ A C G + A LF+ M E+ D + +L+ GL ++ +++ + LL M +K
Sbjct: 864 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 923
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
F P+ +Y L L R K E+ L ++KV
Sbjct: 924 NFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 957
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 160/310 (51%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LIK + + D A++ + + + C+P N IL L + ++ A
Sbjct: 249 PDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWM-DAMK 307
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G LP+ ++NI++ C G + A + M + G P+ S+ L+QG C
Sbjct: 308 LLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 367
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++RA++ LE M+++G PD ++Y LL +LC+ K+ +A +L ++ KGC+P ++
Sbjct: 368 NGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 427
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+A A ++LE+M G P+L++ ++VGGL +G A K+ +
Sbjct: 428 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL 487
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
P+ + +++I G C + A L +++ G P E T+ ++ I
Sbjct: 488 KRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLA 547
Query: 428 EKLGEVLNEI 437
E ++ NE+
Sbjct: 548 EDASKLSNEL 557
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 166/342 (48%), Gaps = 7/342 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GR K S I IL + + + + LI Y +S + AL+ M P
Sbjct: 126 KIGRTKNASQIMGIL---EESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSP 179
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +L L R L+ A + + P+ + +++ A C + A L
Sbjct: 180 NAATYDAVLCSLC-DRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 238
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
FN+M +G PDV +Y +L++G C+ +++ A+ L+ + + G PD +S+ +L SLC
Sbjct: 239 FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS 298
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ +A KLL M KGC P +V +N ++ C++G A VLE MP +G PN S
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 358
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+ L+ G C+ D A +Y+++M+S+G P + L+ C GKVD+A +L +L
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G +P ++ ++ + + E E+L E+ +K D
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 2/318 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+S+ YP + T LI + + +A+K F M CKP N +++
Sbjct: 208 LQSKCYPDVVTC-TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG-G 265
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A K +G P+ S+N+++R+ C G A L M +G +P V ++
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LC+K + +A+++LE M G P++ S+ L+ C K + A + L M +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YN ++ C++G+ DA +L + S GC P+L+SY T++ GL G ++A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ ++ M KG P +++ G GKV EA L + P+ + I+
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505
Query: 421 ICAGEEMEKLGEVLNEIV 438
+C ++ + L ++V
Sbjct: 506 LCKSQQTSLAIDFLADMV 523
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K +ML C P N ++ L + L A ++ + KHG PN++S+N ++
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLC-QKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ FC I A M RG PD+ +Y IL+ LC+ +V+ AV +L + +KG
Sbjct: 364 QGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P +SY T+++ L + K A +LL M KG PD++ +VV G REG+ +A K
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ PN Y +++ GLC +A ++ M++KG P + LIKG
Sbjct: 484 FHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITY 543
Query: 389 VGKVDEACGVLEELLKAG 406
G ++A + EL G
Sbjct: 544 EGLAEDASKLSNELYSRG 561
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 38/278 (13%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ + ++R FC G A + + E G + DV SY +L+ G C+ ++ A
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR------------------- 296
+ +L+ M G P+ +Y +L SLC + KL++A ++L R
Sbjct: 169 LRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDA 225
Query: 297 ----------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
M+ KGC PD+V YN ++ GFC+ GR +A + L+ +PS GC P+
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPD 285
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
++S+ ++ LC G + A K + M+ KG P + LI C G + +A VLE
Sbjct: 286 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLE 345
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ K G P+ ++ ++ C G+ +++ E L +V
Sbjct: 346 MMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R NG++ M +G PDV + L++ C+ + A ++ + G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
V D SY L++ C+ ++ EA ++L RM G +P+ Y+ V+ C G+ A +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL + C P++V+ L+ C + A K M +KG P + LIKGFC
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
G++DEA L++L G P + MI+ +C+G
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSG 299
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 5/178 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY IL+ L K + D ++I + +PSL +Y +I + + A++
Sbjct: 393 TYNILLTAL--CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLE 450
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M KP ++ L + +R A F + + PN YN ++ C +
Sbjct: 451 EMCYKGLKPDLITCTSVVGGL-SREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKS 509
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
S+A M +G P +Y L++G+ + A L ++ ++G V +L
Sbjct: 510 QQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSL 567
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 145/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD++ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG +P+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQC 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G ++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P + T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 177 VVSYNTLMNGYIRLGD-LNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ L +K
Sbjct: 236 DEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 DGHVP 420
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 108/204 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y
Sbjct: 228 MDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNT 287
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL +K + +A DL+++M KG PD +Y TL++ C++ L A++ RM +
Sbjct: 288 LIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGS 407
Query: 362 KYMQLMISKGFSPHFSVSHALIKG 385
K ++ M G P + L+ G
Sbjct: 408 KLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML P N ++ L + L+ A DL
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGL-XKKGDLKQAHDLIDEM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 309 SMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PD +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 369 VDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Query: 313 VLG 315
+ G
Sbjct: 429 MNG 431
>gi|242088695|ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 173/386 (44%), Gaps = 39/386 (10%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
P H + ++ +L RA+ F L+ +L L++ P+ P+ F LI + PD
Sbjct: 51 PRHLHDHPFAACVLYRLARARLFPLVPPLLTALRTLRVPLQPTAFAALIDHLGAFSRPDA 110
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL FR++ F C + +L LV + + A D+ A K GV N SYNI++
Sbjct: 111 ALLVFRAVPAF-CSHSNATFHALLHSLVCN-GRVDAARDMLPEAPKLGVRTNAVSYNIIL 168
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C S A + ++M RG+ P V ++ L+ CR+ ++ A L+++M +
Sbjct: 169 KGVCHRDGFSGARVVLDEMLARGLRPTVVTFNTLVGSACREGELAAAEQLMDEMARRSVP 228
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH-------------------- 308
P+ ++Y L+ LC + +A KLL M+ + C PD+ +
Sbjct: 229 PNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGL 288
Query: 309 ---------------YNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLC 352
YN ++ C G+ +A + L +M +G +P+ +YR L+ G C
Sbjct: 289 ISDMRKRKLTPDDASYNVLIKCLCDAGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCC 348
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+ FD+ + M++ G P L++G GK +EAC VLE++ + G
Sbjct: 349 EARDFDLGLRVFNAMLASGHCPLALTFRRLVRGLGEDGKAEEACFVLEQMGQRGMRLDAQ 408
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIV 438
W + +C+ ++ ++N +V
Sbjct: 409 GWQSVAACVCSSSSATEM-NLINHLV 433
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 176/352 (50%), Gaps = 5/352 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALKTFR 154
+Y I+I L + + + D+ ++S ++P++ TY IY S +A F+
Sbjct: 246 SYSIIIDSLCKNRLVNEAVDLFYHMRS--IGISPTVVTYNSLIYGMCNSGQWKQASILFK 303
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
MLE+N KP + +++ L L A +F + + P+ +Y+ ++ C +
Sbjct: 304 EMLEWNMKPDVVTFSILVDALCKEGVVLE-ALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ TL N+M R + PDV ++ I + C+K V+ A ++ M+ +G P+ ++Y
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+L++ C ++ EA K+ M KGC PD++ YN ++ G+C+ R +A ++ ++M
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH 482
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G PN +++ TL+ GLC G AK+ + M S G P L+ GFC G +DE
Sbjct: 483 KGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
A + E L K+ P+ +++ +C ++E E+ + + E++ D
Sbjct: 543 ALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 158/311 (50%), Gaps = 10/311 (3%)
Query: 130 PSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++T+ + + + A+ + M+E +C+P + I++ L +R + A D
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR-LVNEAVD 265
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P +YN ++ C +G A LF +M E + PDV ++ IL+ LC
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V A+ + M+ PD ++Y++L++ +C+ +E+ LL M + PD+V
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
++ V FC++G +A ++ M G PN+V+Y +L+ G C D A+K +M
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----- 422
++KG +P + LIKG+C ++DEA + +E+ G P+ T ++ +C
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505
Query: 423 --AGEEMEKLG 431
A E +K+G
Sbjct: 506 YAAKELFKKMG 516
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 164/328 (50%), Gaps = 5/328 (1%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + +Y I I ++ L + A+ F M P N ++ + + + A
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW-KQASI 300
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK + + P+ +++I++ A C G + A ++F KM + + PD+ +Y L+ G+C
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ S + LL +ML++ PD ++++ ++ C+K + EA ++ M +G P++V
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN+++ G+C + +A KV + M + GC P+++SY L+ G C D AK+ M
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Query: 368 ISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
KG +P+ S++H LI G C G+ A + +++ G P T+ ++ C
Sbjct: 481 SHKGLTPN-SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ + + K ++K + I + +G
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLG 567
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 143/300 (47%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL F M+ N P Q N++L LV ++Y +++ GV + + I
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHY-DSVVSIYRKMEFFGVSCSVYTLTI 144
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C + + +++ K+F+ G P + ++ L+ GLC + ++ A++ L+ ++++G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ P ++T ++N LC+ K A + +M C P++V Y+ ++ C+ +A
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ M S G P +V+Y +L+ G+C+ G + A + M+ P L+
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G V EA V ++++ P T+ ++ +C ++ +LNE++ I+ D
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 5/340 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ L R K++ + + I K E + V+ S++T LI +L + +
Sbjct: 110 LLAALVRMKHYDSV--VSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFK 167
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
KP N ++ L + A + G P ++ +++ C G S
Sbjct: 168 LGFKPSIITFNTLINGLCI-EGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A KM E P+V SY I++ LC+ VN AVDL M + G P ++Y +L+
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+C + ++A L M PD+V ++ +V C+EG ++A V M
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +L+ G+C ++ + + M+S+ P + FC G V EA +
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ +++ G P+ T+ ++ C +M++ +V + +V
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 177/353 (50%), Gaps = 2/353 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
F H+ S L +I +++F+ + +SE L+ +I Y +S + ++
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSI 114
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M++ P N +L +V ++ + F + +K V+ + S+ I+++
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF--NQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G+I ++ L ++ E G P+V Y L+ G C+K ++ +A DL +M G V +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT L+N L + ++ +++ +M+ G P++ YN V+ C++GR DA +V +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G N+V+Y TL+GGLC + + A K + M S G +P+ + LI GFC VG
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
K+ +A + +L G +P T+ ++V C + +++ E+ + IK
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 132/243 (54%), Gaps = 6/243 (2%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ F++++ + GV PN +YN +M C +G A+ +F++M ERGV ++ +Y L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLCR+ ++N A +++ M + G P+ ++Y TL++ C KL +A L +K +G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+P +V YN +V GFCR+G A K++++M G P+ V+Y L+ D +K
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS---DNMEK 426
Query: 363 YMQLMISK---GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+QL +S G P LI GFC G+++EA + + +++ P+E + ++
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 420 QIC 422
C
Sbjct: 487 GYC 489
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LIK E+ +++ + EF P +++ + + A DLF
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG-CCKKGEIEKAKDLFFEM 224
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G++ N ++Y +++ NG + ++ KM E GV P++ +Y +M LC+ +
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + ++M +G + ++Y TL+ LCR+ KL EA K++ +MK G NP+++ YNT+
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC G+ A + D+ S G P+LV+Y LV G C +G A K ++ M +G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P LI F +++A + + + G P T+ +++ C +M +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 433 VLNEIVK 439
+ +V+
Sbjct: 465 LFKSMVE 471
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 106/197 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ P+ +YNI++ FC GD S A + +M ERG+ P +Y I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ R + +A+ L M G VPD +Y+ L++ C K ++ EA +L M K
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P+ V YNT++LG+C+EG + A K+L++M PN+ SYR ++ LC + A+
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 362 KYMQLMISKGFSPHFSV 378
+ ++ MI G P S+
Sbjct: 534 RLVEKMIDSGIDPSTSI 550
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 120/236 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G+ PN +YN ++ FC G + A +L + RG+ P + +Y I
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CRK + A ++++M +G P ++YT L+++ R + +A +L M+ G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ Y+ ++ GFC +G+ +A ++ + M C PN V Y T++ G C +G A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
K ++ M K +P+ + +I+ C K EA ++E+++ +G P +I
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 164/323 (50%), Gaps = 18/323 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKS 191
+T LI +++ D A + + M+ P N +L V+ R + A L +
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR--MEEAIGLLRG 438
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ P+ SY+ ++ FC ++ A+ + +M E+GV PD +Y L+QGLC + +
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+N A DL ++MLNK +PD +YT+L+N C++ L EA L M KG PD V YN
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV---------------GGLCDQGM 356
++ G ++ R +A ++L + + +PN ++Y TL+ G C +G+
Sbjct: 559 LINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGL 618
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A + + MI + P+ +V + +I G C G V +A + +E++ G PH T +
Sbjct: 619 MNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
+V + + E+L V+ +I++
Sbjct: 679 LVKALYSEGMDEQLNLVIRDILR 701
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 155/319 (48%), Gaps = 3/319 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY +I Y + D A K RSM +P N ++ L +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC-RVGRIEETSG 294
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G P+ +YN ++ +C G+ A L ++M G+ PDV +Y L+ +C
Sbjct: 295 VLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMC 354
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +NRA++ + M +G P+ ++YT+L+N +K + EAY++ M G P IV
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G C GR +A +L M G P++VSY T++ G C D A + M
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ KG SP +LI+G C +++EAC + +E+L P E T+ ++ C ++
Sbjct: 475 VEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL 534
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ + +E++K DT
Sbjct: 535 NEALNLHDEMIKKGFLPDT 553
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 132/265 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F+ ++ LPN +YN ++ A+C I A+ L M G+ P++ +Y +
Sbjct: 219 LEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNM 278
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLCR ++ +L +M KGF PD ++Y TL+N C+ +A L M G
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y +++ C+ G A + + M G PN V+Y +L+ G +G D A
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ MI GF P +AL+ G C G+++EA G+L + G +P ++ I+
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C +E+++ ++ E+V+ + D
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDA 483
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+ ++F ++K + N ++AL P N IL+ +V R + A +
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV 190
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
++ GV N SYNI++R FC G++ + F +M +P+V +Y ++ C+
Sbjct: 191 YREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCK 250
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+++ A LL M +G P+ L+Y ++N LCR ++ E +L M KG PD V
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YNT+V G+C+ G A + +M NG P++V+Y +L+ +C G + A ++ M
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+G P+ +LI GF G +DEA + +E++++G P T+ ++ C ME
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430
Query: 429 K 429
+
Sbjct: 431 E 431
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 164/392 (41%), Gaps = 51/392 (13%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++I L R +L + + + + L+ Y + +AL M
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P ++ + N L A + F H G+ PN +Y ++ F G
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGN-LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ AY ++++M G P + +Y L+ G C ++ A+ LL M KG PD +SY+T
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ CR ++L A+++ M KG +PD + Y++++ G C + R +AC + ++M +
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP---------------------- 374
LP+ +Y +L+ G C +G + A MI KGF P
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573
Query: 375 ----------------------------HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
F ALIKGFC G ++EA V E ++K
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ P+E + +I+ C + K ++ E+V
Sbjct: 634 QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC-FNGDISIAYTLFNKMFERGVMPD 235
++ N++ A ++ A +G +P SYN ++ + + A ++ +M GV +
Sbjct: 143 SYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLN 202
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V SY IL++G C + + E+M +P+ ++Y T++ + C+ K++ EA+KLL
Sbjct: 203 VFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLR 262
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M ++G P+++ YN V+ G CR GR + VL +M G P+ V+Y TLV G C G
Sbjct: 263 SMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVG 322
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
F A M+ G P +LI C G ++ A +++ G P+ T+
Sbjct: 323 NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYT 382
Query: 416 MIVPQICAGEEMEKLGEVLNEIVK 439
++ M++ + +E+++
Sbjct: 383 SLINGFSQKGFMDEAYRIWDEMIR 406
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 111/299 (37%), Gaps = 53/299 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + +Y +I + DRA + M+E P + +++ L R L A
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR-LNEA 502
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DLF+ +LP+ +Y ++ +C GD++ A L ++M ++G +PD +Y +L+ G
Sbjct: 503 CDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562
Query: 246 L--------------------------------------------------CRKSQVNRA 255
L C K +N A
Sbjct: 563 LNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEA 622
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ E M+ + P+ Y +++ CR + +A+KL M G P V +V
Sbjct: 623 DQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKA 682
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
EG V+ D+ + L + + LV +G D + M GF P
Sbjct: 683 LYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
KS +++ FC G ++ A +F M +R P+ Y +++ G CR V++A L ++
Sbjct: 604 KSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKE 663
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M++ GF+P T++ L+ +L + + E L+ R ++ C + ++ +
Sbjct: 664 MVDFGFIPHTVTIIALVKAL-YSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEG 722
Query: 322 AIDAC-KVLEDMPSNGCLPN 340
IDA +L +M +G LP+
Sbjct: 723 NIDAVFNLLTEMAKDGFLPS 742
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 1/357 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L AK + + +++ + P F LI + L +R + M
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E C P + I++ + +L+ A ++ +G+ PN YN +++ C
Sbjct: 289 AEHGCTPDIRMYATIIDG-ICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
L +MF++ D ++ IL+ C+ V+R ++LLE ML G +PD ++YTT
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTT 407
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N C++ + EA LL M GC P+ + Y V+ G C R +DA ++ M G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C N +++ TL+ LC +G+ + A + ++ M+ G SP +I G GK DEA
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+L ++ G +P+ + I + + K+ ++ + I I+ D + A I
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVI 584
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 40/351 (11%)
Query: 127 PVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
PV P+ +TY + + A + D AL M C P+P + ILE + R
Sbjct: 117 PVPPNAYTYFPVVRALCARGRIAD-ALAVLDEMPRRGCAPIPPMYHVILEAACRGGGF-R 174
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + + H G + + N+++ A C G + A L + G PDV SY ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL 234
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC + +L+E+M+ P+ +++ TL++ LCR +++L +M GC
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------ 351
PDI Y T++ G C+EG A ++L MPS G PN+V Y TL+ GL
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 352 -----------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
C G+ D + ++ M+ G P +I GFC
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +DEA +L+ + G P+ ++ +++ +C+ E ++++++++
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 160/332 (48%), Gaps = 6/332 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI + R P++ + + Y L+ L A+ + +++L + + P+ F
Sbjct: 315 VAHEILN---RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ ML C P ++ + A L KS
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGF-CKEGLIDEAVMLLKSMTA 430
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C A L ++M ++G + ++ L+ LC+K V +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG +P+ + Y+++
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC +G + A +++ M+S G P
Sbjct: 551 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ S LI+G + G V EA +L EL G
Sbjct: 611 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 3/234 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YN M+ +C G + A L + V P+ +Y +++ LC + ++ A+ +L++M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+G P Y +L + CR R A ++L + +GC D+ + N V+ C +G
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L D+PS GC P++VSY ++ GLC + ++ M+ M+ P+ + LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C G + VL ++ + G P + I+ IC ++ E+LN +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY +I + + L D A+ +SM CKP +L+ L + ++ A D
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVD-AED 458
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G N ++N ++ C G + A L +M G PD+ SY ++ GL
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 518
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+ + + A++LL M+NKG P+T+ Y+++
Sbjct: 519 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAV 578
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++SLC++ + A + L M GC P+ Y ++ G EG +A ++L ++
Sbjct: 579 LYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638
Query: 333 PSNGCL 338
S G L
Sbjct: 639 CSKGAL 644
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G CR Q+ A L + P+ +Y ++ +LC + ++ +A +L M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+GC P Y+ ++ CR G A +VLED+ + GC ++ + ++ +CDQG D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A ++ + S G P +A++KG C + ++EE+++ P+ T+ ++
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C E++ EVL ++ + D R+
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRM 299
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF-- 186
+ +L I Y +S P A + F+ M +P N +L LV + + +F
Sbjct: 134 SKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ F A K G++PN ++NI++ +C A N M + PD +Y ++ L
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTL 253
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+K ++ A DLL DM ++G +P+ +Y L+ C+ L+EA ++ M PD+
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ G C EGR +A K+ ++M + LP++VSY TL+ G + A K ++
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG P+ + ++K +C GK+D+A + ++ ++G +P T+ ++ C
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 427 MEKLGEVLNEIVKVEIKGDT 446
M + ++E+ + +K D+
Sbjct: 434 MGEAFRTMDEMGRKNMKMDS 453
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 5/282 (1%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P++ T+ I IY E+ D A++ M ++NC P N IL+ L + L
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKD-AVEFLNVMGKYNCSPDNVTYNTILDTLC-KKGRLGD 261
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A DL G+LPN +YNI++ +C G + A + M + ++PDV +Y +L+
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + ++ A L ++M N +PD +SY TL+N K+ EA+KLL M KG P
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V +N +V +C+EG+ DA + M +G P+ V+Y TL+ G C G A + M
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M K + +++ C K++EA +L K G
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 134/257 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF L + + GV PN ++NIM++ +C G + A KM E G PD +Y
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ + A +++M K D+++ T+L +LCR+KKL EAYKLL + +G
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y T+++G+ ++G A K+ ++M +P+ V+Y ++GGLC G + A
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ G P + + ++ G+C G V++A ++++ P T +++ +
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603
Query: 422 CAGEEMEKLGEVLNEIV 438
C +EK ++ N V
Sbjct: 604 CMEGVLEKALKLFNTWV 620
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 1/351 (0%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
N TY ++ L + D+L+ +KS + + L+ Y + A
Sbjct: 243 NVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + N P N ++ L + + AF L +LP+ SYN ++
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLC-NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
IS A+ L +M E+GV P+ ++ I+++ C++ +++ A + + M GF PD ++Y
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL+N C+ + EA++ + M K D V NT++ CRE + +A K+L
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G + VSY TL+ G G D A K M K P + +I G C GK ++
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A L ELL++G P E T+ I+ C ++EK + N++V+ K D
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 143/301 (47%), Gaps = 4/301 (1%)
Query: 114 IDDILITL-KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD T+ K E +P TY LI Y ++ A +T M N K LN
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
IL L + L A+ L SA K G + SY ++ + +G++ A L+++M E+
Sbjct: 459 ILRTLCREKK-LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
++P +Y ++ GLC+ + +A+ L ++L G +PD +Y T+L+ CR+ + +A
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ +M PD+ N ++ G C EG A K+ S G + V+Y TL+
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITS 637
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC +G D A + M K P +A+I + G++ EA + ++L+ G P
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Query: 411 E 411
+
Sbjct: 698 Q 698
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 3/314 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+ T+ ++K Y + D A T M E P N ++ N + A
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN-MGEA 437
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F + + ++ + N ++R C + AY L + +RG D SY L+ G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ V+RA+ L ++M K +P T++Y ++ LC+ K +A L + G PD
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YNT++ G+CREG A + M N P++ + L+ GLC +G+ + A K
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFN 617
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+SKG + + LI C G++D+A +L E+ + P T+ I+ +
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677
Query: 426 EMEKLGEVLNEIVK 439
+ + E ++++++
Sbjct: 678 RIREAEEFMSKMLE 691
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 24/322 (7%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
+ N + + T ++ L R K +L + + Y + + LI Y + D
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RALK + M E P N I+ L A + G+LP+ +YN +
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLC-QCGKTEQAISKLNELLESGLLPDETTYNTI 564
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ +C GD+ A+ NKM E PDV + IL++GLC + + +A+ L ++KG
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGK 624
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
DT++Y TL+ SLC++ +L +A+ LL M+ K PD YN ++ GR +A +
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684
Query: 328 VLEDMPSNGCLPN-----------------------LVSYRTLVGGLCDQGMFDVAKKYM 364
+ M G LP+ V+Y + LC +G + A +
Sbjct: 685 FMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744
Query: 365 QLMISKGFSPHFSVSHALIKGF 386
KG + S L+ G
Sbjct: 745 GESKQKGITVDKSTYINLMDGL 766
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD------ 235
L AF+L + + P+ +YN ++ A +G I A +KM E+G +PD
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLD 703
Query: 236 -----------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+Y ++ LC + + A+ + + KG D +Y L+
Sbjct: 704 KNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763
Query: 279 NSLCRKKK 286
+ L +++K
Sbjct: 764 DGLIKRRK 771
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 127/230 (55%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +Y ++ C I A +M RG+ PD Y ++ GLC++ +V A L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E M+ + P+ ++Y TL+N LC+ ++ AY+L M KG P V YNT++ GFC+
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ + A V + M + C+PN+V+Y TL+ GL G A + + M+ KG +P+ +
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
LI GFC V +VDEA +LE+++ G AP T+ +++ +C +++E
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE 341
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
IDD L T++ + P F Y ++ + + A F M++ P N
Sbjct: 130 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 189
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + A++LFK G +P SYN ++ FC D+ A +F+KM
Sbjct: 190 LINGLCKAWR-IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
+P+V +Y L+ GL + +V A ++L+ M+ KG P+ +Y+ L++ C+ +++ EA
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+KLL +M +G P +V YN ++ CR + DA K+ M C P +V+Y TL+
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
LC D A + MI+KG P L G GKV EA ++E++
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 161/343 (46%), Gaps = 2/343 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
S Y ILI L + F +L T++ + + ++ +I + N + A +
Sbjct: 46 SGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK 105
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M + P I+E L + + A + G+ P+ YN ++ C
Sbjct: 106 MARY-APPDALTYGPIVERLCKTKR-IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEE 163
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A LF KM ++ + P+V +Y L+ GLC+ ++ A +L ++M KG+VP +SY
Sbjct: 164 KVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYN 223
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL++ C+KK L A + +M C P++V Y T++ G + G+ A +VL+ M
Sbjct: 224 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G PN+ +Y L+ G C D A K ++ M+++G +P + L+ C K+++A
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 343
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ + + P T+ ++ +C ++++ + E++
Sbjct: 344 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMI 386
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 3/287 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P TY +++ ++ D AL T M KP N +L L + A
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK-VEEARL 170
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ K + PN +YN ++ C I AY LF +M +G +P SY L+ G C
Sbjct: 171 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 230
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K + A D+ + M+ VP+ ++YTTL++ L + K++ A ++L M KG P++
Sbjct: 231 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 290
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ GFC+ R +A K+LE M + G P +V+Y L+ LC + A K + M
Sbjct: 291 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 350
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ P + L++ C+ ++D A + E++ G P T+
Sbjct: 351 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 397
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++++ + G Y I++ C G+ AY L + M + +Y ++ L
Sbjct: 31 EVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWL 90
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++V A +L+E M PD L+Y ++ LC+ K++ +A + M +G PD
Sbjct: 91 CKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDA 149
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN V+ G C+E + +A + E M PN+V+Y TL+ GLC + A + +
Sbjct: 150 FIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKE 209
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG+ P + LI GFC + A V ++++++ P+ T+ ++ + +
Sbjct: 210 MAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 269
Query: 427 MEKLGEVLNEIVK 439
++ EVL+ +VK
Sbjct: 270 VQAAAEVLDGMVK 282
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V+P ++N + F G + ++ M E G Y IL+ LC+ + A
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL M K F ++Y+T++N LC+ ++ EA +L+ +M + PD + Y +V
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ R DA +E+M + G P+ Y ++ GLC + + A+ + M+ + +P+
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ LI G C +++ A + +E+ G P E ++ ++ C +++ +V ++
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 437 IVK 439
+V+
Sbjct: 245 MVR 247
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M R V+P ++ + G + ++ + ++ + M+ G+ Y L++ LC+
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
EAYKLL M++K + Y+T++ C+ R +A +++E M P+ ++Y
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V LC D A ++ M ++G P + + ++ G C KV+EA + E+++K
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P+ T+ ++ +C +E E+ E+
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEM 210
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 43/236 (18%)
Query: 72 QSDPLLAKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+ D + AK++FD R PN TY LI L ++ ++L + + V
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNV----VTYTTLIDGLSKSGKVQAAAEVLDGMVKK--GV 285
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
TP++ TY S L D K R + +++LE +VT
Sbjct: 286 TPNVATY-------SCLIDGFCKVRRV----------DEAHKLLEQMVTQ---------- 318
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G+ P +YNI++ + C + A+ LF M +R P V +Y L++ LC
Sbjct: 319 -------GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
Q++ A L +M+ KG PD ++Y TL L R K+ EA +L+ +MK+ NP
Sbjct: 372 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 1/152 (0%)
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M ++ P +NTV GF + GR +V + M G Y L+ LC G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
FD A K + M K F +I C + +V+EA ++E++ + P T+
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
IV ++C + ++ + E+ IK D I
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFI 151
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/176 (18%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P ++ T+ + + +L + ++ M G Y ++ C+ G +A K
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA-LIKGF 386
+L M ++Y T++ LC + A++ ++ M ++P ++++ +++
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR--YAPPDALTYGPIVERL 124
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
C ++D+A +EE+ G P + ++ +C E++E+ + ++VK I
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 145/258 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L +ML+ G VP+ +++TTL++ C+ ++ A ++ ++ +G
Sbjct: 212 LINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M P+ ++Y TL+ G C +G + A
Sbjct: 272 FSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L +L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEIVK 439
C +++ ++L E+ +
Sbjct: 392 CKKGDVKTGSKLLKEMXR 409
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 171 VVSFNTLMSGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
N+M + G++P+ ++ L+ G C+ +V+ A+++ + +L++GF PD ++Y TL+ LC+K
Sbjct: 230 NEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M +K PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 290 GDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 350 TALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXR 409
Query: 405 AGEAP 409
G P
Sbjct: 410 DGHVP 414
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 12/272 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLID-DILITLKSEHYP--VTPSLF 133
LA+ +FD A + R S ++ L+ + Y L D D LKS + V P ++
Sbjct: 154 LAQSVFD-AITKWGLRPSVVSFNTLM-----SGYIRLGDLDEGFRLKSAMHASGVQPDVY 207
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY LI + + D A + F ML+ P +++ + + A +++K
Sbjct: 208 TYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKN-GRVDLAMEIYKQ 266
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G P+ +YN ++ C GD+ A L ++M + + PD +Y L+ G C++
Sbjct: 267 LLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGD 326
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A + + M+ + D ++YT L++ LC++ + +A K+L M G PD Y
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTM 386
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ FC++G K+L++M +G +P +V+
Sbjct: 387 IINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 3/326 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI E AL ML C P N +L+ R Y R A +L
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGY-RQALELIDFMRAE 227
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PN +YN+++ A C GD+ A L N + RG P+ +Y +++G C + A
Sbjct: 228 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDA 287
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L++M+ + P+ + ++N+LCRK L++ L +M GC ++V YN V+ G
Sbjct: 288 DEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISG 347
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C +G A ++L +M S GC P++V+Y T++ GLC ++ A++ M M P
Sbjct: 348 MCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPD 407
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
S + +I +C G + +A V +++ + G P+ T+ I+ + +ME+ E+LN
Sbjct: 408 NSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLN 467
Query: 436 EIVKVEIKGDT--RIVEAGIGLEDYL 459
E+ D R++ + ED +
Sbjct: 468 EMANKGFNTDKMYRVLTESLNKEDKI 493
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 127/232 (54%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
++N ++ A C G ++ A + + M RG PDV +Y IL+Q C+ +A++L++ M
Sbjct: 165 AHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFM 224
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+G P+ ++Y +++++CR+ + +A +LL + +GC P+ V+YNTV+ GFC R
Sbjct: 225 RAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERW 284
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+DA ++L++M C PN + ++ LC +G+ Y++ M G + + +A+
Sbjct: 285 VDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAV 344
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
I G C G VD A +L + G P T+ ++ +C+ + E E++
Sbjct: 345 ISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELM 396
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 158/356 (44%), Gaps = 35/356 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY IL+ + + + +++ +++E + +I D+A + S+
Sbjct: 200 TYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSL 259
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
CKP N +L+ + ++ A ++ + PN + N+++ C G
Sbjct: 260 PSRGCKPNTVNYNTVLKGFCSIERWV-DADEILDEMVRENCPPNEATLNVIINTLCRKGL 318
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ KM + G +V +Y ++ G+C + V+ A++LL +M + G PD ++Y T
Sbjct: 319 LQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNT 378
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L LC + +A +L+ +M PD +NT++ +C++G + A +V + MP G
Sbjct: 379 VLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKG 438
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF------------------------ 372
C PN +Y T++GGL G + A + + M +KGF
Sbjct: 439 CNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQ 498
Query: 373 ----------SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
SP + + ++ G C GK D A VL +++ G P E T+++++
Sbjct: 499 VVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 12/309 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A EI D R+ N + +T ++I L R + L K + T ++ TY
Sbjct: 287 ADEILDEMVRE-NCPPNEATLNVIINTLCRKGLLQKV--TLYLEKMSKHGCTANVVTYNA 343
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+I E D AL+ +M F CKP N +L+ L + + A +L ++
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW-EDAEELMIKMSQN 402
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
LP+ ++N ++ +C G I A+ +F +M E+G P+ +Y ++ GL + ++ +A
Sbjct: 403 DRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQA 462
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++LL +M NKGF D + Y L SL ++ K+ E +++ +++ G +P V YNTV+LG
Sbjct: 463 LELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLG 521
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
CR G+ A VL DM S GC+P+ +Y L+ GL +G A++ + + S+
Sbjct: 522 LCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV--- 578
Query: 376 FSVSHALIK 384
+S++LIK
Sbjct: 579 --LSNSLIK 585
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 42/208 (20%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH--YNTVVLGFCREG------ 320
PD L+ LCR+ + +A ++ V+ C P+ Y +V G+CR G
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARV-----VEACGPEATAATYGALVDGYCRAGLLEDAR 148
Query: 321 -----------------------------RAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
R DA VL+ M GC P++V+Y L+
Sbjct: 149 RVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAA 208
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + A + + M ++G P+ + +I C G VD+A +L L G P+
Sbjct: 209 CKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++ C+ E E+L+E+V+
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVR 296
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 124/221 (56%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + + P+ +YN M+ FC +G S A L +M ER + PDV ++ L+
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML + +P T++Y+++++ C++ +L A + KGC+P
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ +NT++ G+CR R D K+L +M G + N ++Y TL+ G C G + A+ +
Sbjct: 392 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
Q MIS G P+ + L+ G C+ GK+ +A + + + K+
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 147/306 (48%), Gaps = 27/306 (8%)
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
T+ SM++ CK +N L A +F G P+ ++N ++ +
Sbjct: 360 TYSSMIDGFCK----------------QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + L ++M E G++ + +Y L+ G C+ +N A DLL++M++ G P+
Sbjct: 404 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCREG 320
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G EG
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEG 523
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP +
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 583
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
LI G+C G VD+ + E+ + G T++ ++ + ++ ++ E++
Sbjct: 584 TLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISS 643
Query: 441 EIKGDT 446
+ DT
Sbjct: 644 GVYPDT 649
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 22/291 (7%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR----NYL 182
+P + T+ LI Y + D +K M E N I + H L
Sbjct: 390 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA-----NTITYTTLIHGFCQVGDL 444
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RG 231
A DL + GV PN + N ++ C NG + A +F M + G
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG 504
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV++Y IL+ GL + + A +L E+M ++G VPDT++Y+++++ LC++ +L EA
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M K +PD+V +NT++ G+C+ G D ++ +M G + + ++Y TL+ G
Sbjct: 565 QMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGF 624
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
D A Q MIS G P ++ G + +++ A +LE+L
Sbjct: 625 RKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 148/313 (47%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ A+ MLE +P I++ + + + L K
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 244
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++PN YN ++ +G S A+ LF +M E+ + PD+ +Y ++ G C +
Sbjct: 245 EVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRW 304
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL++ML + PD ++++ L+N+ ++ K EA +L M + P V Y+++
Sbjct: 305 SDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSM 364
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC++ R A + P+ GC P+++++ TL+ G C D K + M G
Sbjct: 365 IDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ LI GFC VG ++ A +L+E++ +G P+ T ++ +C +++ E
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484
Query: 433 VLNEIVKVEIKGD 445
+ + K ++ D
Sbjct: 485 MFKAMQKSKMDID 497
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS TY +I + + N D A F C P N ++ + +
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKR-VDDG 412
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G++ NT +Y ++ FC GD++ A L +M GV P+V + L+ G
Sbjct: 413 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDG 472
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD +Y L+ L + K EA +L
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ + M S P++V++ TL+ G C
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
GM D + M +G LI GF V +D A + +E++ +G P T
Sbjct: 593 GMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITI 652
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + + EE+E+ +L ++
Sbjct: 653 RNMLTGLWSKEELERAVAMLEDL 675
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 7/274 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP-DVESYR 240
L A DLF + LP+ + +M G + +L KM E MP + S+
Sbjct: 62 LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKM-EMLRMPCNAYSFT 120
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
ILM+ C S++ A+ + GF P +++ TLL+ LC + ++ EA L +M
Sbjct: 121 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM--- 177
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C P++V + T++ G CREGR ++A +L+ M +G PN ++Y T+V G+C G A
Sbjct: 178 -CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236
Query: 361 KKYMQLMIS-KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
++ M P+ + + +I G G+ +A + E+ + P T+ ++
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C ++L E+++ +I D A I
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALI 330
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 7/200 (3%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G ++ A+DL M+ +P + + L+ + R + L +M++
Sbjct: 52 LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ + ++ FC + A + G P +V++ TL+ GLC + A
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M P+ L+ G C G+V EA +L+ +L+ G P++ T+ IV +
Sbjct: 172 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227
Query: 422 CAGEEMEKLGEVLNEIVKVE 441
C +M LN + K+E
Sbjct: 228 C---KMGDTVSALNLLRKME 244
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 144/256 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD++ + L + M GV PDV +Y +
Sbjct: 156 IRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSV 215
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML KG P+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 216 LINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 275
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++++M G + ++Y TL+ G C +G D A
Sbjct: 276 LLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAF 335
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 336 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEF 395
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L ++
Sbjct: 396 CKKGDVWKGSKLLKDM 411
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + F L+ + + A F ++ ++ +P
Sbjct: 115 LMKLKYFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPS 174
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + GV P+ +Y++++ C + A LF
Sbjct: 175 VVSYNTLMNGYIRLGD-LNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 233
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G+ P+ ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 234 DEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 293
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG D + Y T++ G C+EG A + + M + V+Y
Sbjct: 294 GDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAY 353
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + +L+++ +
Sbjct: 354 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQR 413
Query: 405 AGEAP 409
G AP
Sbjct: 414 NGHAP 418
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 110/204 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF G+ PN ++ ++ C NG + +A ++ +M + ++PD+ +Y
Sbjct: 226 MDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 285
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + +A DL+++M KG D ++YTTL++ C++ L A++ RM +
Sbjct: 286 LIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQEN 345
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G C+EGR++DA K+L +M S G P+ +Y ++ C +G
Sbjct: 346 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGS 405
Query: 362 KYMQLMISKGFSPHFSVSHALIKG 385
K ++ M G +P + L+ G
Sbjct: 406 KLLKDMQRNGHAPSVVTYNVLMNG 429
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A DL
Sbjct: 248 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK-KGDLKQAHDLIDEM 306
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ + +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 307 SMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PDT +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 367 VDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVL 426
Query: 313 VLG 315
+ G
Sbjct: 427 MNG 429
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S N +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A + ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A +++DM G P+ ++Y TL+ G C +G D A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + V ALI G C G+ +A +L E+L P T+ MI+ +
Sbjct: 338 EHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 168/356 (47%), Gaps = 3/356 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
F + S +++ + G+ + IL T ++ + +F+ LI Y ES A+
Sbjct: 35 FSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIY--VFSGLITAYLESGFLRDAI 92
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ +R E ++LE L+ + Y + + ++ + G + +NI+M
Sbjct: 93 ECYRLTREHKLWVPFDTCRKVLEYLMKLK-YFKLVWGFYEEILECGYPASLYFFNILMHR 151
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
FC +GDI +A ++F+ + + G+ P V S LM G R ++ L ML G PD
Sbjct: 152 FCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPD 211
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+Y+ L+N LC++ K+ +A + M VKG P+ V + T++ G C+ GR A ++ +
Sbjct: 212 VYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYK 271
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M S LP+L++Y TL+ GLC +G A + M KG P LI G C G
Sbjct: 272 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEG 331
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+D A + +++ + + ++ +C ++L E++ V +K DT
Sbjct: 332 DLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDT 387
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L GV P+ +Y++++ C + A F
Sbjct: 177 VVSXNTLMNGYIRLGD-LDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A ++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD + Y T++ G C+EG A + + M + V Y
Sbjct: 296 GDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S P +I FC G V + +L+E+ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 405 AGEAP 409
G AP
Sbjct: 416 DGHAP 420
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 106/190 (55%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+ GLC+K + +A
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DL++DM KG PD ++YTTL+B C++ L A++ RM + D V Y ++ G
Sbjct: 302 HDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISG 361
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+EGR++DA K+L +M S P+ +Y ++ C +G K ++ M G +P
Sbjct: 362 LCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 421
Query: 376 FSVSHALIKG 385
+ L+ G
Sbjct: 422 VVTYNVLMNG 431
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 8/335 (2%)
Query: 125 HYPVTPSLFT---YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---H 178
H+ T +F+ LI++ A F ++LE K + + L+T
Sbjct: 27 HFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAILE--TKGTQRSDIYVFSGLITAYLE 84
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+LR A + ++ +H + + ++ + + + ++ E G +
Sbjct: 85 SGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYF 144
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ ILM C+ + A + + + G P +S TL+N R L E ++L M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVML 204
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD+ Y+ ++ G C+E + DA + ++M G +PN V++ TL+ G C G D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+AK+ + M+S+ P + LI G C G + +A +++++ G P + T+ ++
Sbjct: 265 LAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLI 324
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +++ E +++ I+ D + A I
Sbjct: 325 BGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 154/298 (51%), Gaps = 1/298 (0%)
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
+ +N D A+ F +L N P + N+IL LV ++Y L K G+ P
Sbjct: 62 FHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHY-HTVLYLSKKMEFRGIKP 120
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N + NI++ FC G I A+++F K+ + G P+ ++ L++GLC K Q+++A++
Sbjct: 121 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFH 180
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ ++ GF + +SY TL++ LC+ + R A LL R+ K P++V Y+T++ G C++
Sbjct: 181 DKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKD 240
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
DA + +M S G PN+V+Y L+ G G A MIS+ P
Sbjct: 241 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTF 300
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ L+ FC GK+ A +++E+ G+ P+ T+ I+ +C ++K +L ++
Sbjct: 301 NILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKL 358
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 118/235 (50%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A DL + V PN Y+ ++ C + ++ A+ L+++M +G+ P+V +Y L
Sbjct: 209 RAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 268
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G ++ AVDL M+++ PD ++ L++ C+ K+ A KL+ M +G
Sbjct: 269 ISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQ 328
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+IV Y++++ C+ R A +L + G PN+ +Y L+ GLC G + A+
Sbjct: 329 PPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARN 388
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ ++ KG+ + GFC G DEA +L ++ + G P T+ +I
Sbjct: 389 IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ AFDL+ G+ PN +Y+ ++ F G + A LFNKM + PDV ++
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ C+ +++ A+ L+++M ++G P+ ++Y+++L++LC+ ++ +A LL ++K +
Sbjct: 302 ILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQ 361
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++ Y ++ G C G+ DA + ED+ G +V+Y + G C +G+FD A
Sbjct: 362 GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEA 421
Query: 361 KKYMQLMISKGFSPHFSVSHALIK 384
+ M G P + ++ LIK
Sbjct: 422 SALLSKMEENGCIPD-AKTYELIK 444
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 103/181 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A DLF + P+ ++NI++ FC +G IS A L ++M +RG P++ +Y
Sbjct: 278 LKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSS 337
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ LC+ +V++AV LL + ++G P+ +YT L++ LC KL +A + + VKG
Sbjct: 338 ILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKG 397
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ +V Y + GFC++G +A +L M NGC+P+ +Y + L +G D+A+
Sbjct: 398 YDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAE 457
Query: 362 K 362
K
Sbjct: 458 K 458
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 121/269 (44%), Gaps = 7/269 (2%)
Query: 184 PAFDLFKSAHKHGVLPNTKS------YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
P+F K+ H +P + S Y+ F N D+ A +LFN + + P
Sbjct: 30 PSFQFLKNTH-FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAI 88
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ ++ L + + + L + M +G P+ ++ L+N C+ + A+ + ++
Sbjct: 89 EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 148
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G NP+ + + T++ G C +G+ A + + + G N +SY TL+ GLC G
Sbjct: 149 LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGET 208
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ + K P+ + +I G C V++A + E++ G +P+ T+ +
Sbjct: 209 RAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 268
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +++ ++ N+++ IK D
Sbjct: 269 ISGFFTVGKLKDAVDLFNKMISENIKPDV 297
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV-THRNYLRP 184
+ P ++T+ L+ ++ +S ALK M + P + IL+ L THR +
Sbjct: 293 IKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR--VDK 350
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L G+ PN +Y I++ C +G + A +F + +G V +Y ++
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
G C+K + A LL M G +PD +Y + SL +K + A KL
Sbjct: 411 GFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKL 459
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 153/283 (54%), Gaps = 7/283 (2%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++PS+ F +I Y+++ L D+A + ++ M+ F P P + +L + ++ L+ A
Sbjct: 262 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL-MGLSINGRLQEA 320
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G+ N ++ +++ F GD+ A +L+ +M RG+ PDV ++ + G
Sbjct: 321 TELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDG 380
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L ++ V A ++ +ML KG +P+ +Y +L+ C+ KL EA KL M+ +G PD
Sbjct: 381 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 440
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV--AKKY 363
I N ++ G C++GR A V DM G P++++Y TL+ G C FD+ A
Sbjct: 441 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA--FDMVNADNL 498
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M + G +P + + I GFC+ +++ A +L+EL+ AG
Sbjct: 499 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 121/241 (50%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ A C G S A FN M ERG P V ++ ++ C++ V A L
Sbjct: 89 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 148
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ + GF P+ + Y TL+N + +++ +A L M+ KG PD + +N +V G +
Sbjct: 149 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 208
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
GR D ++L+D+ G LP+ + V GLC G D A +++ M+ KG SP
Sbjct: 209 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 268
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+++I + G D+A + ++ G P T ++ + +++ E++ +++
Sbjct: 269 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 328
Query: 439 K 439
+
Sbjct: 329 E 329
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 142/312 (45%), Gaps = 1/312 (0%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
SLF + + D A++ MLE P N ++ + AF+ +K
Sbjct: 232 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAA-YSQAGLEDKAFEAYK 290
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ P+ + + ++ NG + A L +M E+G+ + ++ +L+ ++
Sbjct: 291 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 350
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
V A L +M +G PD ++++ ++ L ++ + EAY + M KG P+ YN
Sbjct: 351 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 410
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ GFC+ G+ +A K+ + M G LP++ + ++GGLC QG A M
Sbjct: 411 SLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT 470
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G SP + LI G+C + A ++ + +G P T+ + + C+ M +
Sbjct: 471 GLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 530
Query: 431 GEVLNEIVKVEI 442
+L+E+V I
Sbjct: 531 VLMLDELVSAGI 542
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M +F+C+P N ++ R A F + G P ++N ++ AFC G
Sbjct: 82 MPKFHCEPNAFAYNIVINACCI-RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEG 140
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A LF+ + E G P+ Y LM G + ++++A L E+M KG PD +++
Sbjct: 141 NVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFN 200
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L++ + + + +LL + V G PD ++ V G C GR +A + L DM
Sbjct: 201 ILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEK 260
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P+++++ +++ G+ D A + +LM+ G +P S +L+ G G++ EA
Sbjct: 261 GLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEA 320
Query: 396 CGVLEELLKAG 406
++ ++++ G
Sbjct: 321 TELIGQMIEKG 331
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 6/279 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ + GV P+ I+ + GD + LF + RG P ++ ++
Sbjct: 5 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CRK ++ LL M P+ +Y ++N+ C + + +A M +GCNP
Sbjct: 65 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V +NTV+ FC+EG ++A K+ + + G PN + Y TL+ G D A
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-A 423
+ M KG +P + L+ G G+ ++ +L+++ G P + + V +C A
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 244
Query: 424 G---EEMEKLGEVLNEIVKVEIKGDTRIVEA--GIGLED 457
G E ME L ++L + + I ++ A GLED
Sbjct: 245 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 283
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 91/163 (55%)
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ + + A+++F + G++PN +YN ++ FC G ++ A L M RG++PD
Sbjct: 381 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 440
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ + +++ GLC++ ++ A+++ DM G PD ++Y TL+N C+ + A L+
Sbjct: 441 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 500
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
RM G NPD+ YN + GFC R A +L+++ S G L
Sbjct: 501 RMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIL 543
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 164/421 (38%), Gaps = 75/421 (17%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALKTFR 154
T+ +IL R L + +L + H P+ F Y I I A AL F
Sbjct: 58 TFSGIILGFCRKGCIHLGESLLHLMPKFH--CEPNAFAYNIVINACCIRGRTSDALAWFN 115
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E C P N ++ N + A LF + G PN YN +M +
Sbjct: 116 LMIERGCNPTVVTFNTVINAFCKEGNVVE-ARKLFDGLKEMGFSPNAIMYNTLMNGYVKM 174
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQG----------------------------- 245
+I A L+ +M ++G+ PD ++ IL+ G
Sbjct: 175 REIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLF 234
Query: 246 ------LCRKSQVNRAVDLLEDMLNKGFVPDTLSY------------------------- 274
LC +++ A++ L DML KG P +++
Sbjct: 235 DISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294
Query: 275 ----------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
++LL L +L+EA +L+ +M KG + + + + ++ F + G +
Sbjct: 295 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 354
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + +M G P++V++ + GL QG+ + A M+ KG P+ ++LI
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 414
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
GFC GK++EA + + + G P T MI+ +C M V ++ + +
Sbjct: 415 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 474
Query: 445 D 445
D
Sbjct: 475 D 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%)
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+A+++L M G P L L R +KL + +G P ++ ++
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
LGFCR+G +L MP C PN +Y ++ C +G A + LMI +G +
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + +I FC G V EA + + L + G +P+ + ++ E+++ +
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 434 LNEIVKVEIKGD 445
E+ K I D
Sbjct: 184 YEEMRKKGIAPD 195
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ F Y LI + + + ALK + M P N I+ L + +R A
Sbjct: 402 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL-CKQGRMRSA 460
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F H+ G+ P+ +YN ++ +C D+ A L N+M+ G PD+ +Y I + G
Sbjct: 461 INVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHG 520
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
C ++NRAV +L+++++ G + + + LN+
Sbjct: 521 FCSSRRMNRAVLMLDELVSAGILSFSFACPPTLNA 555
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 169/355 (47%), Gaps = 5/355 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI--YAESNLPDRALKTFRSMLE 158
L+ + + K++S + + ++ K + + + P ++T I I + N D AL +L+
Sbjct: 62 LLTSIAKMKHYSTV--LSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILK 119
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P ++ L + A D+F G PN +Y +M C + ++
Sbjct: 120 LGHQPDTATFTTLVRGLCV-VGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A LF++M +G+ PD+ +Y L+ LC + LL +M+ +P+ +S ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++LC++ K+ EA+ ++ M G PD+V Y ++ G C +A KV + M NGC+
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
N+VSY TL+ G C D A + M + P+ LI G C+VG++ +A +
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
E++ G+ P+ T+ +++ +C + + +L I + D ++ I
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 2/325 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
LK H P T + FT L++ AL F M+ +P ++ L R
Sbjct: 118 LKLGHQPDTAT-FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQ 176
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A +LF G+ P+ +YN ++ A C + TL N+M + +MP+V S
Sbjct: 177 -LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ LC++ +V A D+++ M+ G PD ++Y L++ C + ++ EA K+ M
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC ++V YNT++ G+C+ R A + E+M +PN ++Y TL+ GLC G A
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
M++ G P+ L+ C ++ EA +L+ + + P + + +
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDG 415
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGD 445
+C ++E ++ + + ++ D
Sbjct: 416 MCRAGDLEAARDLFSNLAPRGLQPD 440
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 5/287 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY L+ + AL F M+ P N ++ L + +
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW-KHVTT 217
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K ++PN S NI++ A C G ++ A+ + + M + GV PDV +Y LM G C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+S+++ AV + + M+ G V + +SY TL+N C+ +++ +A L M + P+ +
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ G C GR DA + +M + G +PNLV+Y L+ LC A ++ +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P V + I G C G ++ A + L G P D W
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQP--DVW 442
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKT--FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P +FTY I+A NL + T M++ P LN +++ L + A
Sbjct: 192 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCK-EGKVTEA 250
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ + GV P+ +Y +M C ++ A +F+ M G + +V SY L+ G
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLING 310
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++++A+ L E+M + +P+T++Y+TL++ LC +L++A L M G P+
Sbjct: 311 YCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPN 370
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y+ ++ C+ R +A +L+ + + P++ Y + G+C G + A+
Sbjct: 371 LVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFS 430
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ +G P + +I+G C G +DEA + E+ + G + T+ I +
Sbjct: 431 NLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNN 490
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+ + ++L E++ D
Sbjct: 491 KTSRAIQLLEEMLARGFSAD 510
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 129/261 (49%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R+ + A +F ++G + N SYN ++ +C I A LF +M + ++P+ +
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC ++ A+ L +M+ G +P+ ++Y+ LL+ LC+ +L EA LL ++
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+PD+ YN + G CR G A + ++ G P++ ++ ++ GLC +G+ D
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLD 458
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K + M G + + + +G K A +LEE+L G + T ++V
Sbjct: 459 EASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+ + + ++L E ++
Sbjct: 519 KMLSDDGLDQSVKQILCEFMR 539
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 1/232 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI Y + D+A+ F M P + ++ L H L+ A LF
Sbjct: 304 YNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLC-HVGRLQDAIALFNEM 362
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G +PN +Y+I++ C N ++ A L + + PDV+ Y I + G+CR +
Sbjct: 363 VACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDL 422
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A DL ++ +G PD ++ ++ LC++ L EA KL M GC + YNT+
Sbjct: 423 EAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTI 482
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
G + + A ++LE+M + G ++ + LV L D G+ K+ +
Sbjct: 483 TQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ FN + A + F++M P + + L+ + + + + L + M +
Sbjct: 26 NFQSKSLHFN-TLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS 84
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD + T ++NS C ++ A +L ++ G PD + T+V G C G+ +
Sbjct: 85 FGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGE 144
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A V + M G PN+V+Y TL+ GLC A MI+KG SP ++LI
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN+ + +L E++K+ P+ + ++V +C ++ + +V++ +++ ++
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEP 264
Query: 445 D 445
D
Sbjct: 265 D 265
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 163/313 (52%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +FTY LI + A+ F M N P + +++ N ++ A
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGN-IKEA 422
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ K + P+ +Y+ +M +C +++ A ++FN M RGV +V+SY I++ G
Sbjct: 423 KNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMING 482
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V+ A+ L ++M +K PD ++Y++L++ LC+ ++ A +L+ M +G PD
Sbjct: 483 FCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD 542
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I+ YN+++ C++ A +L + G P++ +Y LV GLC G + A+K +
Sbjct: 543 IITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFE 602
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG++ +I+GFC+ G DEA +L ++ + G P T+ +I+ + +
Sbjct: 603 DLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662
Query: 426 EMEKLGEVLNEIV 438
E + ++L E++
Sbjct: 663 ENDMAEKLLREMI 675
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 134/258 (51%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ AFDL+ + P+ +YN ++ FC G + A LFNKM + ++PDV ++
Sbjct: 348 HVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFS 407
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ G C+ + A ++L M+ + PD ++Y++L++ C ++ +A + M +
Sbjct: 408 ILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR 467
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G ++ YN ++ GFC+ +A K+ ++M P++++Y +L+ GLC G A
Sbjct: 468 GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA 527
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ + M +G P ++++ C VD+A +L +L G P +T+ ++V
Sbjct: 528 LELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587
Query: 421 ICAGEEMEKLGEVLNEIV 438
+C ++E +V +++
Sbjct: 588 LCQSGKLEDARKVFEDLL 605
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 123/227 (54%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A +F + GV N +SYNIM+ FC + A LF +M + + PDV +Y
Sbjct: 452 NEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 511
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC+ +++ A++L+++M +G PD ++Y ++L++LC+K + +A LL ++K
Sbjct: 512 SSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKG 571
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD+ Y +V G C+ G+ DA KV ED+ G ++ +Y ++ G CD+G+FD
Sbjct: 572 QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A + M G P +I + D A +L E++ G
Sbjct: 632 ALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A +L + V P+ YN ++ C + ++ A+ L+++ + + PDV +Y L
Sbjct: 315 KAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNAL 374
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++ A+DL M +K +PD +++ L++ C+ ++EA +L M +
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI 434
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V Y++++ G+C A + M G N+ SY ++ G C M D A K
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMK 494
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M K P +LI G C G++ A +++E+ G+ P T+ I+ +C
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
++K +L ++ I+ D
Sbjct: 555 KKHHVDKAITLLTKLKGQGIRPD 577
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 121/253 (47%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K+G P+T + ++ FC G I A +K+ G D SY L+ GLC+ +
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++LL K PD + Y T+++ +C+ K + +A+ L K PD+ YN ++
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC G+ DA + M S +P++ ++ LV G C G AK + +M+ +
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P +L+ G+C V +V++A + + G + ++ +++ C + +++ ++
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495
Query: 434 LNEIVKVEIKGDT 446
E+ +I D
Sbjct: 496 FKEMHHKQIFPDV 508
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF H +L I + + +ISI YT K+ + G PD + ++G C
Sbjct: 216 LFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTP-PKILKNGYEPDTITLTTFIKGFC 274
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
K Q+++A+ + ++ GF D +SY TL+N LC+ + + A +LL R K PD+V
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVV 334
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G C++ DA + + S P++ +Y L+ G C G A M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
SK P L+ GFC G + EA VL ++K P T+ ++ C E+
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454
Query: 428 EKLGEVLNEI 437
K + N +
Sbjct: 455 NKAESIFNTM 464
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 114/235 (48%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY ++ C G+ A L + + V PDV Y ++ G+C+ VN A DL +
Sbjct: 300 SYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEK 359
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++K PD +Y L++ C KL++A L +M K PD+ ++ +V GFC++G
Sbjct: 360 VSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNI 419
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A VL M P++V+Y +L+ G C + A+ M +G + + + +
Sbjct: 420 KEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I GFC + VDEA + +E+ P T+ ++ +C + E+++E+
Sbjct: 480 INGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 125 HYPVTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H VT ++ +Y I I + + + D A+K F+ M P + +++ L +
Sbjct: 466 HRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCK-SGRI 524
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A +L H G P+ +YN ++ A C + A TL K+ +G+ PD+ +Y IL
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTIL 584
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++GLC+ ++ A + ED+L KG+ D +YT ++ C K EA LL +M+ GC
Sbjct: 585 VKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGC 644
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
PD Y ++L + A K+L +M G L L
Sbjct: 645 IPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 49/348 (14%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ A+ F +L N P + +IL LV ++Y L + G+ N + NI
Sbjct: 92 NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHY-HTVLSLSQKMEFKGIKLNFLNCNI 150
Query: 207 MMRAFCFNGDISIAYTLFNK----------MFERGVMPD--------------------- 235
++ +FC G I A+++ + F+R + D
Sbjct: 151 LINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKD 210
Query: 236 ---------VESYRILMQ---GLCRKSQVNRAVDLLED-----MLNKGFVPDTLSYTTLL 278
+ S++IL++ ++ + ++ ++ + +L G+ PDT++ TT +
Sbjct: 211 FLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFI 270
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C K ++ +A ++ G + D V Y T++ G C+ G A ++L
Sbjct: 271 KGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQ 330
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V Y T++ G+C + A +SK P +ALI GFC VGK+ +A +
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ P T+ ++V C +++ VL ++K IK D
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN N+ L L ++ +LID ++ P LFTY ++ +
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR------GCQPDLFTYGTVVNGLCKRGD 219
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D AL + M + + I++ L ++N + A +LF G+ PN +YN
Sbjct: 220 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYN 278
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++R C G S A L + M ER + P+V ++ L+ ++ ++ A L ++M+ +
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD +Y++L+N C +L EA + M K C P++V YNT++ GFC+ R +
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M G + N V+Y TL+ GL G D+A+K + M+S G P L+ G
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L K+ P T+ +++ +C ++E
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ ++ L++Y I I S LP AL M++ +P L+
Sbjct: 81 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP-LALAVLGKMMKLGYEPDIVTLSS 139
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L PNT ++N ++ + S A L ++M R
Sbjct: 140 LLNG-YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 198
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y ++ GLC++ ++ A+ LL+ M D + YTT++++LC K + +A
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 258
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M KG P++V YN+++ C GR DA ++L DM PN+V++ L+
Sbjct: 259 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 318
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K MI + P +LI GFC ++DEA + E ++ P+
Sbjct: 319 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 378
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ E+ E+ + + G+T
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 414
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 169/383 (44%), Gaps = 3/383 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNS--TYLILILKLGRAKYFSLID 115
P+ S KL+++ + + R N R S +Y ILI R L
Sbjct: 60 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 119
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + Y + L+ Y A+ M +P N ++ L
Sbjct: 120 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 179
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
H N A L G P+ +Y ++ C GDI +A +L KM + + D
Sbjct: 180 FLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 238
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y ++ LC VN A++L +M NKG P+ ++Y +L+ LC + +A +LL
Sbjct: 239 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M + NP++V ++ ++ F +EG+ ++A K+ ++M P++ +Y +L+ G C
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D AK +LMISK P+ + LIKGFC +V+E + E+ + G + T+
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 418
Query: 416 MIVPQICAGEEMEKLGEVLNEIV 438
++ + + + ++ ++V
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMV 441
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +FTY LI + + D A F M+ +C P N +++ + +
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR-VEEG 398
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +YN +++ GD +A +F KM GV PD+ +Y IL+ G
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + PD +Y ++ +C+ K+ + + L C + +KG P+
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 518
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y T++ GFCR+G +A + +M +G LPN +Y TL+ G + + ++
Sbjct: 519 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 578
Query: 366 LMISKGF 372
M S GF
Sbjct: 579 EMRSCGF 585
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF + LP+ +N ++ A + +L +M + D+ SY I
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ PD ++ ++LLN C K++ EA L+ +M V
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+L +Y T+V GLC +G D+A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + +I CN V++A + E+ G P+ T+ ++ +
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 285 CNYGRWSDASRLLSDMIERKI 305
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI + + A K + M++ + P + ++ H + L A
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEA 363
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ PN +YN +++ FC + LF +M +RG++ + +Y L+QG
Sbjct: 364 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 423
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + A + + M++ G PD ++Y+ LL+ LC+ KL +A + ++ PD
Sbjct: 424 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 483
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C+ G+ D + + G PN++ Y T++ G C +G+ + A +
Sbjct: 484 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 543
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P+ + LI+ G + +++E+ G T M++ + G
Sbjct: 544 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 602
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 230 RGVMPDVESYRI---LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
RGV SY L + + +++ AVDL +M+ +P + + LL+++ + K
Sbjct: 20 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 79
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L RM+ + D+ YN ++ FCR + A VL M G P++V+ +
Sbjct: 80 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 139
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C A + M + P+ + LI G K EA +++ ++ G
Sbjct: 140 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 199
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD----TRIVEA 451
P T+ +V +C +++ +L ++ K +I+ D T I++A
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 248
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 134/270 (49%), Gaps = 1/270 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +L+ P K N ++ LV L A ++F GV S+N M+ C
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLV-RLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 162
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD+ A TL +M E GV PDV +Y L+QGLCR ++ A + E M +G P+ +
Sbjct: 163 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 222
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+T L+++ C+K +L M+ +G PD V YN +V G CR A ++ +M
Sbjct: 223 VFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 282
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S G P+ V+Y TL+ G C + D+A + Q M+++G ALI G G+
Sbjct: 283 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 342
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+A VL E+++AG P T+ M++ C
Sbjct: 343 ADAERVLGEMMEAGLEPDNTTYTMVIDAFC 372
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 151/323 (46%), Gaps = 1/323 (0%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
+L+ L R + ++ ++S T F +I + D A R M E
Sbjct: 121 VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA 180
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P +++ L + A +F+ G+ PN + I++ A C GD
Sbjct: 181 GVTPDVYTYGALIQGLC-RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAET 239
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
L +M ERGV PD +Y ++ GLCR + A ++ +M + G PDT++YTTL++
Sbjct: 240 MLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID 299
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C++++L A ++ M +G D V Y ++ G + GR+ DA +VL +M G P
Sbjct: 300 GYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEP 359
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ +Y ++ C +G + ++ M +KG P + ++ GFC +G++ A +L
Sbjct: 360 DNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLL 419
Query: 400 EELLKAGEAPHEDTWVMIVPQIC 422
++ G +P + T+ +++ C
Sbjct: 420 NAMINIGVSPDDITYNILLDGHC 442
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P K +N++MR G+++ A +F++M RGV V S+ ++ G+CR ++ A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L M G PD +Y L+ LCR ++ +A + +M +G P+ V + ++
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C++G A ++ +M G P+ V+Y +V GLC A + M S G P
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI G+C ++D A + + ++ G E T+ ++ + VL
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350
Query: 436 EIVKVEIKGD 445
E+++ ++ D
Sbjct: 351 EMMEAGLEPD 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + ++ + G+ P+ + + +LM+ L R ++ A ++ ++M ++G +S+ T+++
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+CR L A L RM G PD+ Y ++ G CR GR DA V E M G P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N V + L+ C +G + + + M +G P +A++ G C + A G++
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
E+ AG P T+ ++ C EE++ + +EIK + +V G+GL++
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELD---------MAMEIKQN--MVAEGVGLDE 326
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 4/199 (2%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R R TY LI + + + +I + +E + +T LI +++
Sbjct: 283 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 342
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
A + M+E +P +++ + ++ L K G P +YN+
Sbjct: 343 ADAERVLGEMMEAGLEPDNTTYTMVIDAFC-RKGDVKTGLRLLKEMQNKGRKPGVVTYNV 401
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+M FC G + A L N M GV PD +Y IL+ G C+ +V D+ E KG
Sbjct: 402 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVT---DIEELKSAKG 458
Query: 267 FVPDTLSYTTLLNSLCRKK 285
VPD YT+++ + +KK
Sbjct: 459 TVPDLGVYTSIVGEIVKKK 477
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 134/270 (49%), Gaps = 1/270 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +L+ P K N ++ LV L A ++F GV S+N M+ C
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLV-RLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 286
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD+ A TL +M E GV PDV +Y L+QGLCR ++ A + E M +G P+ +
Sbjct: 287 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 346
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+T L+++ C+K +L M+ +G PD V YN +V G CR A ++ +M
Sbjct: 347 VFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 406
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S G P+ V+Y TL+ G C + D+A + Q M+++G ALI G G+
Sbjct: 407 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 466
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+A VL E+++AG P T+ M++ C
Sbjct: 467 ADAERVLGEMMEAGLEPDNTTYTMVIDAFC 496
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 124/238 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F+ G+ PN + I++ A C GD L +M ERGV PD +Y ++
Sbjct: 329 ARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVN 388
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLCR + A ++ +M + G PDT++YTTL++ C++++L A ++ M +G
Sbjct: 389 GLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 448
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y ++ G + GR+ DA +VL +M G P+ +Y ++ C +G + +
Sbjct: 449 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 508
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M +KG P + ++ GFC +G++ A +L ++ G +P + T+ +++ C
Sbjct: 509 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHC 566
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P K +N++MR G+++ A +F++M RGV V S+ ++ G+CR ++ A
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L M G PD +Y L+ LCR ++ +A + +M +G P+ V + ++
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C++G A ++ +M G P+ V+Y +V GLC A + M S G P
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI G+C ++D A + + ++ G E T+ ++ + VL
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474
Query: 436 EIVKVEIKGD 445
E+++ ++ D
Sbjct: 475 EMMEAGLEPD 484
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + ++ + G+ P+ + + +LM+ L R ++ A ++ ++M ++G +S+ T+++
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 283
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+CR L A L RM G PD+ Y ++ G CR GR DA V E M G P
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N V + L+ C +G + + + M +G P +A++ G C + A G++
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
E+ AG P T+ ++ C EE++ + +EIK + +V G+GL++
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELD---------MAMEIKQN--MVAEGVGLDE 450
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%)
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA ++ G P+ +N ++ R G A V ++M S G +VS+ T++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G+C G D A+ + M G +P ALI+G C VG++++A GV E++ G
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ + +++ C + E + E+ E+ + ++ D
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDA 380
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 4/199 (2%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R R TY LI + + + +I + +E + +T LI +++
Sbjct: 407 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 466
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
A + M+E +P +++ + ++ L K G P +YN+
Sbjct: 467 ADAERVLGEMMEAGLEPDNTTYTMVIDAFC-RKGDVKTGLRLLKEMQNKGRKPGVVTYNV 525
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+M FC G + A L N M GV PD +Y IL+ G C+ +V D+ E KG
Sbjct: 526 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVT---DIEELKSAKG 582
Query: 267 FVPDTLSYTTLLNSLCRKK 285
VPD YT+++ + +KK
Sbjct: 583 TVPDLGVYTSIVGEIVKKK 601
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 161/326 (49%), Gaps = 21/326 (6%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K +HYP SL ++ A+ +PD L T ++ C H
Sbjct: 21 VKMKHYPTVISLSK---QMEAKGIVPD--LVTLSILINCFC----------------HLG 59
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ +F + K G PNT N +M+ C G++ + +K+ +G D SY
Sbjct: 60 QMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYG 119
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ GLC+ + A+ LL + ++ PD + Y+T+++ LC+ K + EAY L M +
Sbjct: 120 ILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR 179
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD++ Y T++ GFC G+ ++A +L +M PN+ +Y TL+ LC +G +
Sbjct: 180 GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKES 239
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + +M KG P + L+ G+C VG+V +A + +++ G P ++ +I+
Sbjct: 240 KNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIING 299
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C G+ +++ +L E++ + DT
Sbjct: 300 LCKGKRVDEAMNLLREMLHKNMIPDT 325
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 155/313 (49%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY LI + + A M+ N P N +++ L ++ +
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTL-CKEGKVKES 239
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L K GV P+ Y+I+M +C G++ A +F M + GV PDV SY I++ G
Sbjct: 240 KNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIING 299
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V+ A++LL +ML+K +PDT++Y++L++ LC+ ++ L M +G +
Sbjct: 300 LCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPAN 359
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN+++ G C+ A + M G PN +Y L+ GLC G + Q
Sbjct: 360 LVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQ 419
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG+ +I G C G DEA + ++ G P+ T+ +I+ + +
Sbjct: 420 HLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKD 479
Query: 426 EMEKLGEVLNEIV 438
E +K ++L+E++
Sbjct: 480 ENDKAEKLLHEMI 492
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 145/281 (51%), Gaps = 1/281 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R++ + + +P + I++ L + + A+DL+ + G+ P+ +Y ++
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDK-LVDEAYDLYSEMNARGIFPDVITYTTLI 192
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A+ L N+M + + P++ +Y L+ LC++ +V + +LL M KG
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD + Y+ L++ C ++++A ++ M G NPD+ YN ++ G C+ R +A +
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNL 312
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L +M +P+ V+Y +L+ GLC G + M +G + ++L+ G C
Sbjct: 313 LREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCK 372
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+D+A + ++ + G P++ T+ ++ +C G ++K
Sbjct: 373 NQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKK 413
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 126/247 (51%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L ++ P+ Y+ ++ C + + AY L+++M RG+ PDV +Y L
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q+ A LL +M+ K P+ +Y TL+++LC++ K++E+ LL M KG
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V Y+ ++ G+C G A ++ M G P++ SY ++ GLC D A
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMN 311
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M+ K P +LI G C +G++ + +E+ G+ + T+ ++ +C
Sbjct: 312 LLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC 371
Query: 423 AGEEMEK 429
+ ++K
Sbjct: 372 KNQNLDK 378
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+L +M +G++PD+ + IL+ C Q+ + +L +L G+ P+T+ TL+ L
Sbjct: 31 SLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGL 90
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C K +++++ ++ +G D V Y ++ G C+ G A K+L + P++
Sbjct: 91 CLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDV 150
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V Y T++ GLC + D A M ++G P LI GFC G++ EA G+L E
Sbjct: 151 VMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ P+ T+ ++ +C ++++ +L + K +K D I
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
R + P +E +IL L + + L + M KG VPD ++ + L+N C ++
Sbjct: 5 RHIPPIIEFGKIL-GSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAF 63
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
++ +L ++ G P+ + NT++ G C +G + + + + G + VSY L+
Sbjct: 64 SFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLN 123
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC G A K ++ + + P + +I G C VDEA + E+ G P
Sbjct: 124 GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP 183
Query: 410 HEDTWVMIVPQIC-AGEEMEKLGEVLNEIV 438
T+ ++ C AG+ ME G +LNE++
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFG-LLNEMI 212
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 145/296 (48%), Gaps = 4/296 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD + LK+ Y P+ +Y ++K + + A + M + C P N
Sbjct: 43 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 102
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L + + PA ++ + K+G PN+ SYN ++ AFC + A + M R
Sbjct: 103 LISFLC-RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 161
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ SY L+ LCR +V+ AV+LL + +KG P +SY T+++ L + K +EA
Sbjct: 162 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 221
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL M KG PDI+ Y+T+ G CRE R DA + + G PN V Y ++ G
Sbjct: 222 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 281
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
LC + A MI G P+ S LI+G G + EA +L+EL G
Sbjct: 282 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 1/279 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A+K M + C P N ++ + + A + K+ +G PNT SYNI+
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNG-ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++ C A L +M ++G P+V ++ +L+ LCRK V A+++LE + G
Sbjct: 69 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P++LSY LL++ C++KK+ +A L M +GC PDIV YNT++ CR G A +
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 188
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L + GC P L+SY T++ GL G A + + M+SKG P + G C
Sbjct: 189 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 248
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
++++A ++ G P+ + I+ +C E
Sbjct: 249 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 287
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 172/331 (51%), Gaps = 3/331 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY ++ + D A++ +++ + C+P N +L+ L T + A
Sbjct: 24 TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW-EDAE 82
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L + G PN ++N+++ C G + A + ++ + G P+ SY L+
Sbjct: 83 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 142
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++++A+ L+ M+++G PD +SY TLL +LCR ++ A +LL ++K KGC P +
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 202
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L +M S G P++++Y T+ GLC + + A +
Sbjct: 203 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ G P+ + +A+I G C + A + ++ G P+E T+ +++ +
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
+++ ++L+E+ + + I + I L D
Sbjct: 323 IKEARDLLDELCSRGVVRKSLINKGAIRLLD 353
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 142/260 (54%), Gaps = 5/260 (1%)
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
A C A L ++M ++G PD+ +Y +++ G+C++ +V+ A++ L+++ + G P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+T+SY +L LC ++ +A +L+ M KGC P++V +N ++ CR+G A +VL
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
E +P GC PN +SY L+ C Q D A ++ LM+S+G P + L+ C
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVKVEIKGDT-- 446
G+VD A +L +L G AP ++ ++ + AG+ E L E+LNE+V ++ D
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL-ELLNEMVSKGLQPDIIT 239
Query: 447 -RIVEAGIGLEDYLIGKTRS 465
+ AG+ ED + R+
Sbjct: 240 YSTIAAGLCREDRIEDAIRA 259
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R+ + A L G P+ +YN+++ C G + A + G P+ S
Sbjct: 5 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 64
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y I+++GLC + A +L+ +M KG P+ +++ L++ LCRK + A ++L ++
Sbjct: 65 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 124
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
GC P+ + YN ++ FC++ + A L+ M S GC P++VSY TL+ LC G D
Sbjct: 125 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 184
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
VA + + + KG +P + +I G GK EA +L E++ G P T+ I
Sbjct: 185 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 244
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+C + +E ++ + I+ +T + A I
Sbjct: 245 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 279
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 140/265 (52%), Gaps = 12/265 (4%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N L P F G+ +T YN ++ + + T++++M ERG+ PDV ++
Sbjct: 138 NQLDPLF---------GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTF 188
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM+ LCR QV AV +LE+M + G PD ++TTL+ + ++ A ++ RM
Sbjct: 189 NTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLE 248
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC+P V N ++ G+C+ GR DA ++ +NG P+ ++Y T V GLC G
Sbjct: 249 MGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGH 308
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K M +M+ +G P + ++ C G+++EA G+L ++++ G P T+ ++
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKG 444
+C+G +E E L+ +V +KG
Sbjct: 369 ALCSGNRLE---EALDLARQVTLKG 390
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 34/372 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ L+ L RA +L + S + FT L++ + E AL+ M
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARM 246
Query: 157 LEFNCKPLPKQLN----------RILELLVTHRNYLRPAFD------------LFKSAH- 193
LE C P +N R+ + L + + F+ L ++ H
Sbjct: 247 LEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHV 306
Query: 194 -----------KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ G P+ +YNI++ C NG + A + N+M ERG +PD+ ++ L
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL 366
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LC +++ A+DL + KG PD ++ L+N+LC+ + A +L MK GC
Sbjct: 367 IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC 426
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V YNT++ C G+ A +L++M S GC + V+Y T++ GLC + + A++
Sbjct: 427 TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M +G S + + LI G C ++D+A ++ +++ G P+ T+ I+ C
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYC 546
Query: 423 AGEEMEKLGEVL 434
+++K ++L
Sbjct: 547 KQGDIKKAADIL 558
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 140/272 (51%), Gaps = 3/272 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ ++ + A M+E C P N ++ L + N L A D
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSG-NRLEEALD 381
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ P+ ++NI++ A C GD +A LF +M G PD +Y L+ LC
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +A+DLL++M + G T++Y T+++ LC+K ++ EA ++ +M ++G + + +
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C++ R DA +++ M S G PN ++Y +++ C QG A +Q M
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ GF LI G C G+ A +L
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLL 593
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 4/313 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ +L+ + E + + M E KP N +++ L + +R A + +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALC-RAHQVRTAVLMLEE 210
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV P+ ++ +M+ F G I A + +M E G P + +L+ G C+ +
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V A+ ++ + GF PD ++Y T +N LC+ + A K++ M +G +PD+ YN
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
VV C+ G+ +A +L M GCLP++ ++ TL+ LC + A + + KG
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP + LI C VG A + EE+ +G P E T+ ++ +C+ + KLG
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS---LGKLG 447
Query: 432 EVLNEIVKVEIKG 444
+ L+ + ++E G
Sbjct: 448 KALDLLKEMESAG 460
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 1/274 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
ALK M++ P N ++ L + L A + + G LP+ ++N ++
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKN-GQLEEAKGILNQMVERGCLPDITTFNTLI 367
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A C + A L ++ +G+ PDV ++ IL+ LC+ A+ L E+M + G
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++Y TL+++LC KL +A LL M+ GC V YNT++ G C++ R +A +V
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEV 487
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M G N +++ TL+ GLC D A + + MIS+G P+ ++++ +C
Sbjct: 488 FDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCK 547
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G + +A +L+ + G T+ ++ +C
Sbjct: 548 QGDIKKAADILQTMTANGFEVDVVTYGTLINGLC 581
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 43/332 (12%)
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+TLK ++P ++T+ I I A + P AL+ F M C P N +++ L
Sbjct: 386 VTLKG----LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ L A DL K G +T +YN ++ C I A +F++M +G+ +
Sbjct: 442 S-LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
++ L+ GLC+ +++ A L+ M+++G P+ ++Y ++L C++ +++A +L
Sbjct: 501 ITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQT 560
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAI--------------------------------- 323
M G D+V Y T++ G C+ GR
Sbjct: 561 MTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNN 620
Query: 324 --DACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYMQLMISKGFSPHFSVSH 380
DA + +M G P+ +Y+ + GLC G A ++ M+ KGF P FS
Sbjct: 621 TRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFR 680
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
L +G N+G D +E +++ + D
Sbjct: 681 MLAEGLLNLGMDDYFIRAIEIIIEKADLGDSD 712
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN N TY ++ + DIL T+ + + V + LI ++
Sbjct: 532 QPN----NITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
ALK R M + PK N +++ L RN R A +LF+ + G P+ +Y I+
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLF-RRNNTRDAMNLFREMTEVGEPPDAFTYKIV 646
Query: 208 MRAFC-FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
R C G I A+ +M ++G +P+ S+R+L +GL + + +E ++ K
Sbjct: 647 FRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKA 706
Query: 267 FVPDT 271
+ D+
Sbjct: 707 DLGDS 711
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLC-RMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
F P Y ++ L + K+L M+ +G + ++ + + R+ +DA
Sbjct: 73 FAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDA 132
Query: 326 CKVLEDM--PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++ + P G + V Y L+ L + + + M +G P + L+
Sbjct: 133 VDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLM 192
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
K C +V A +LEE+ +G AP E T+ ++
Sbjct: 193 KALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLM 227
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 8/340 (2%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
+ +LGR K +L+ ++ + Y TP + +Y ++ Y D+ K M
Sbjct: 698 FVCQLGRIKE---AHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
KP I+ LL L A + F + G+LP+T Y ++ FC GDI
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A F +M R + PDV +Y ++ G C+ + A L +M KG PD++++T L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N C+ +++A+++ M GC+P++V Y T++ G C+EG A ++L +M G
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+ +Y ++V GLC G + A K + + G + L+ +C G++D+A +
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+E+L G P T+ +++ C +E ++LN ++
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 15/391 (3%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
S S + S C V L + D +A+ + +P ++S +
Sbjct: 556 SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDS-------------FVQ 602
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D ++ T K + P +F ++ + L A + F ML + N L
Sbjct: 603 FFDLLVYTYKD--WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 660
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L A +F+ + GV N SYNI++ C G I A+ L M +G
Sbjct: 661 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 720
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV SY ++ G CR ++++ L+E M KG P++ Y +++ LCR KL EA +
Sbjct: 721 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 780
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
M +G PD V Y T++ GFC+ G A K +M S P++++Y ++ G C
Sbjct: 781 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 840
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A K M KG P LI G+C G + +A V +++AG +P+
Sbjct: 841 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C +++ E+L+E+ K+ ++
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R +R A F H + P+ +Y ++ FC GD+ A LF++MF +G+ PD +
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C+ + A + M+ G P+ ++YTTL++ LC++ L A +LL M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+I YN++V G C+ G +A K++ + + G + V+Y TL+ C G D
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ ++ M+ KG P + L+ GFC G +++ +L +L G AP+ T+ +V
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
Q C ++ + ++ + D + E
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 132/253 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF G+ P++ ++ ++ +C G + A+ + N M + G P+V +Y L+
Sbjct: 848 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ ++ A +LL +M G P+ +Y +++N LC+ + EA KL+ + G N
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 967
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y T++ +C+ G A ++L++M G P +V++ L+ G C GM + +K +
Sbjct: 968 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++KG +P+ + ++L+K +C + A + +++ G P T+ +V C
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Query: 425 EEMEKLGEVLNEI 437
M++ + E+
Sbjct: 1088 RNMKEAWFLFQEM 1100
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 7/327 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYLR 183
+TP + TY I + D A K F M CK L EL+ + +++
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF---CKGLEPDSVTFTELINGYCKAGHMK 881
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
AF + + G PN +Y ++ C GD+ A L ++M++ G+ P++ +Y ++
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ + AV L+ + G DT++YTTL+++ C+ ++ +A ++L M KG
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P IV +N ++ GFC G D K+L M + G PN ++ +LV C + A
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M S+G P L+KG C + EA + +E+ G + T+ +++
Sbjct: 1062 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVE 450
++ + EV +++ + + D I +
Sbjct: 1122 RKKFLEAREVFDQMRREGLAADKEIFD 1148
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI Y ++ A + M++ C P +++ L + L A +L
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEM 925
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G+ PN +YN ++ C +G+I A L + G+ D +Y LM C+ ++
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A ++L++ML KG P +++ L+N C L + KLL M KG P+ +N++
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V +C A + +DM S G P+ +Y LV G C A Q M KGF
Sbjct: 1046 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
S S LIKGF K EA V +++ + G A ++ + G+ + + +
Sbjct: 1106 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 1165
Query: 433 VLNEIVK 439
++EI++
Sbjct: 1166 PIDEIIE 1172
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 129/323 (39%), Gaps = 30/323 (9%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA RS+ + CK + + ++ +L+ + R D F A N +S I+
Sbjct: 513 RAEPLRRSLKPYECK---FKTDHLIWVLMKIKCDYRLVLDFFDWARSRRD-SNLESLCIV 568
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESY---------------------RILMQGL 246
+ + D+ +A +L + +ER + +S+ + Q L
Sbjct: 569 IHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVL 628
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLS---YTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ A + E MLN G V S Y T L+ C K A + G
Sbjct: 629 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAIIVFREFPEVGVC 686
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
++ YN V+ C+ GR +A +L M G P+++SY T+V G C G D K
Sbjct: 687 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 746
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+++M KG P+ + ++I C + K+ EA E+++ G P + ++ C
Sbjct: 747 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT 446
++ + E+ +I D
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDV 829
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 2/301 (0%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L T+LI + ++ + ++A + F M+ P + L+ + + ++ A +
Sbjct: 187 PDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEARE 246
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F K G P+ +YN M+ G A + + M + +P +Y IL+ LC
Sbjct: 247 VFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLC 306
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + RA +L M GF P+++ YT+L++ + +++EA L M G PD++
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ ++ G C+ G A K E+M GC PN+V+Y T++ GL G A + M+ M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I+ G P L+ GFC +G++DEA +L+EL K +P+ + +V +C G +
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSV 486
Query: 428 E 428
E
Sbjct: 487 E 487
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 2/325 (0%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+DD+ K+ + P L +I ++ D A + F+ M+ CKP N ++
Sbjct: 490 LDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 174 LLVTHR-NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L R N + AF L G LP+ +Y + C G++ A + + RG
Sbjct: 550 GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
DV +Y L GLC + QV+RAV L ++M+ +G PD +Y ++N L + KKL +A K
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK 669
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGL 351
M KG P + Y +V C G +A E M + G L +++ Y L+ G
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGF 729
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C D A K + MIS+G P S +L G GK ++A +L+E+ G PH
Sbjct: 730 CKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNE 436
T+ I+ + +E KL +++ E
Sbjct: 790 ATFTAILDGLRKSDESGKLLKLVQE 814
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 8/366 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI-TLKSEHYPVTPSLFTYL 136
A F +A Q F+H TY L+ L K +S I LK+ P T S F L
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS-FNIL 160
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLFKSAHK 194
I+ +A + D A+ F M CKP L+ L L+ + AF++F
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKP---DLHTFLILVDCLCKAGMDEKAFEVFHEMMA 217
Query: 195 HGVLPNTKS-YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G +P ++ + M+R + A +F +M + G PD +Y ++ GL +
Sbjct: 218 MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQ 277
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ +L++ML K VP ++Y L+NSLC+ L A +L M G P+ V Y +++
Sbjct: 278 EALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GF + GR +AC + ++M G P+++++ ++ GLC G F+ A K + M+ G
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ +I+G +G+V A +++ ++ G P T++ ++ C +++ ++
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457
Query: 434 LNEIVK 439
L+E+ K
Sbjct: 458 LDELDK 463
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 175/370 (47%), Gaps = 17/370 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAK-YFSLIDDILITLKSEHYPVTPSLF 133
A+E+F + FR ++ Y LI K GR K SL D+++ P +
Sbjct: 314 AEELFRVMA-ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV------EAGYRPDVI 366
Query: 134 TYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
T+ + I +S ++A K+F M+ CKP I++ L + + AF + K
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL-SKIGRVANAFRIMKG 425
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
HG P++ +Y ++ FC G + A L +++ + P+++ Y L++GLC
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGS 485
Query: 252 V-NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
V N DL E D +++ LC+ +L EA ++ RM +GC PD YN
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 311 TVVLGFCR--EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
++ G CR E R A +L D+ G LP+ V+Y L GLC G D A K ++
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
S+G++ AL G C G+VD A + +E+++ G AP + I+ + G+++E
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLE 665
Query: 429 KLGEVLNEIV 438
+ +E++
Sbjct: 666 DACKFFDEMI 675
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 156/330 (47%), Gaps = 15/330 (4%)
Query: 97 TYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
T+LIL+ L +A K F + +++ P +L T +++ ++ A +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAM---GFVPPDRALHTAMVRTLLKAKRVKEAREV 247
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F M + P N +++ L + + A + + +P +Y I++ + C
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGL-AKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLC 306
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A LF M G P+ Y L+ G + ++ A L ++M+ G+ PD +
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++T +++ LC+ +A K M GC P++V Y T++ G + GR +A ++++ M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
++GC P+ V+Y L+ G C G D A + + + SP+ + +L+KG C+ G V
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSV 486
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ L++L + +A E+ + P +C
Sbjct: 487 EN---TLDDLFEQSKAAAEN----LDPGLC 509
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 3/260 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD--ISIAYTLFNKMFERGVMPDVESY 239
L A +F+ G P+ +YNI++ C + + + A+ L + + G +PD +Y
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L GLC+ +V+RAV +LE+ ++G+ D ++YT L LC + ++ A L M
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD Y ++ G + + DACK ++M G P + +Y LV LC G D
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Query: 360 AKKYMQLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+++G + ALI GFC KVD A + E+++ G P T +
Sbjct: 702 AFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLF 761
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+ + EK E+L E+
Sbjct: 762 DGLVRSGKTEKAQELLQEMA 781
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 153/346 (44%), Gaps = 4/346 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY IL+ L +A +++ + + + ++T LI +A+S A F M
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E +P +++ L N+ + A F+ + G PN +Y +++ G
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAA-KSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ A+ + M G PD +Y L+ G C+ +++ A LL+++ P+ Y++
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 277 LLNSLCRKKKLREAYK-LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L+ LC + L + K N D ++++G C+ GR +AC++ + M S
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKGFSPHFSVSHALIKGFCNVGKVD 393
GC P+ +Y L+ GLC V + + L + G+ P L G C +G+VD
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A +LEE G + + +C ++++ + E+V+
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 161/340 (47%), Gaps = 9/340 (2%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P LA + F +A +Q + HS Y +++ + + +L + ++ F
Sbjct: 156 PRLAYKFFLWAGQQEGYHHSTGMYNLVMKVFAQCGEVKAMWRLLEEMTENGLSISARTFH 215
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
LI ++ L R ++ F FN +P N IL L+T Y L + H+
Sbjct: 216 LLICTCGQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQY-----SLIEWVHQ 270
Query: 195 ----HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G P+ +YNI+MRA G + + L ++M + G+ PD+ +Y IL+ L +
Sbjct: 271 KMLMEGHSPDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGD 330
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A++LL M + G VP L +T L++ L R L M KGC PD+V Y
Sbjct: 331 KPLAALNLLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCYT 390
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G+ +A K+ +DM G LPN+ +Y T++ GLC G FD A ++ M +
Sbjct: 391 VMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKACSMLKDMDLR 450
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G +P+FSV L+ N GK EA V++ + G+ H
Sbjct: 451 GCTPNFSVYSTLVCRLRNAGKDAEANNVIKYMANKGQYLH 490
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 128/298 (42%), Gaps = 36/298 (12%)
Query: 176 VTHRNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V + R A+ F + + G +T YN++M+ F G++ + L +M E G+
Sbjct: 150 VNRERFPRLAYKFFLWAGQQEGYHHSTGMYNLVMKVFAQCGEVKAMWRLLEEMTENGLSI 209
Query: 235 DVESYRILM----QGLCRKSQVNRAVD-------------------------------LL 259
++ +L+ Q R+ V R + +
Sbjct: 210 SARTFHLLICTCGQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQYSLIEWVH 269
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ ML +G PD L+Y ++ + KL + ++LL M G PD+ YN ++ +
Sbjct: 270 QKMLMEGHSPDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKG 329
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ + A +L M GC+P+++ + L+ GL G + K + M+ KG P
Sbjct: 330 DKPLAALNLLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCY 389
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I G+ +++EA + +++L G+ P+ T+ ++ +C E +K +L ++
Sbjct: 390 TVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKACSMLKDM 447
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 157/307 (51%), Gaps = 9/307 (2%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTF 153
S ++ ++ LGRA+ + +L + + PSL F ++ + + ++ D A + +
Sbjct: 12 SIFVTIVRGLGRARMVRQMIKVLDLIT--KFGENPSLKIFNSILDVLVKEDI-DLAREFY 68
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R + N IL + N + AF L + G PNT YN M+ A C
Sbjct: 69 RKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCK 128
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG + A +L N+M E P ++ +L+ C++ + +A+ LLE + GFVPD ++
Sbjct: 129 NGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVT 184
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T ++ LC+ ++ E ++L R++ G D+V YNT++ GFC G+A +VL+DM
Sbjct: 185 ATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDME 244
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GCLPN+ +Y L G CD GM D A M + G + +F LI+G C+ G+++
Sbjct: 245 IKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRME 304
Query: 394 EACGVLE 400
+ +LE
Sbjct: 305 DGFKILE 311
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 46/377 (12%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ SL+++++ E VT F LI Y + +AL P
Sbjct: 131 KVGRAR--SLMNEMV-----EPSDVT---FNVLISAYCQEENLVQALVLLEKSFSMGFVP 180
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+++ +L + ++ + G + + +YN +++ FC G + + +
Sbjct: 181 DVVTATKVVGILC-KAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 239
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M +G +P+V++Y IL G C ++ A+DL DM G + ++Y TL+ LC
Sbjct: 240 LKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 299
Query: 284 KKKLREAYKLLCRMKVK--GCNPDIVHYNTVV---------------------------- 313
++ + +K+L M+ G I YN+++
Sbjct: 300 GGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVD 359
Query: 314 -----LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
LGFC EG DA +V + M G +P+++ Y L+ G C G A + + M+
Sbjct: 360 RSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV 419
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G+ P +ALI FC GKV A ++E+++ G P ++ +V +C + +
Sbjct: 420 DHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQ 479
Query: 429 KLGEVLNEIVKVEIKGD 445
K + ++V+ +I D
Sbjct: 480 KAVRLFLQMVEKDILPD 496
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER--GVMPDVESY 239
L A DLF G+ N +Y+ ++R C G + + + M E G + Y
Sbjct: 268 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 327
Query: 240 RILMQGLCRKSQVNRAVDLL---------------------------------EDMLNKG 266
++ GL +K+Q A++ L + M+ +G
Sbjct: 328 NSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEG 387
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VP L Y L++ C+ +REA++L+ M G P +N ++ FC +G+ A
Sbjct: 388 GVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSAL 447
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
K++EDM GCLP++ SY +V LC++G F A + M+ K P +S ++++
Sbjct: 448 KLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K G LPN +YNI+ +C +G + A LFN M G+ + +Y L++GLC
Sbjct: 239 VLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC 298
Query: 248 RKSQVNRAVDLLEDML-NKGFVPDTLS-YTTLLNSLCRKKKLREAYKLLCRM-------- 297
++ +LE M ++G +S Y +++ L +K + EA + L +M
Sbjct: 299 SGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAV 358
Query: 298 ----KVKG-CN--------------------PDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ G CN P ++ Y ++ GFC++G +A +++ +M
Sbjct: 359 DRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM 418
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G P ++ L+ C QG A K M+ M+ +G P ++ CN G
Sbjct: 419 VDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDF 478
Query: 393 DEACGVLEELLKAGEAPHEDTW 414
+A + ++++ P TW
Sbjct: 479 QKAVRLFLQMVEKDILPDYSTW 500
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 153 FRSMLEFNCKP---LPKQLNRILELL-VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
F LEF K P+ ++R L +L + + A ++ K G +P+ Y ++
Sbjct: 340 FEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLI 399
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC +G++ A+ L N+M + G P ++ L+ C + +V A+ L+EDM+ +G +
Sbjct: 400 HGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCL 459
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
PD SY+ ++++LC K ++A +L +M K PD +N+++L +E
Sbjct: 460 PDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 510
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+N A + K + P ++ + FC G I A ++++M + G +P V
Sbjct: 337 KNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLV 394
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G C+ V A +L+ +M++ G+ P ++ L+++ C + K+ A KL+ M
Sbjct: 395 YVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMV 454
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+GC PD+ Y+ +V C +G A ++ M LP+ ++ +++
Sbjct: 455 GRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 19/237 (8%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK--KKLR 288
G PD + +++GL R V + + +L+ + G P + ++L+ L ++ R
Sbjct: 6 GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAR 65
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
E Y+ +M + G + D + ++ G C R DA K+L+ M S G PN V Y T++
Sbjct: 66 EFYRK--KMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 123
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC G A+ M M+ P + LI +C + +A +LE+ G
Sbjct: 124 HALCKNGKVGRARSLMNEMV----EPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 179
Query: 409 PHEDTWVMIVPQIC-AG---------EEMEKLGEVLNEIV-KVEIKGDTRIVEAGIG 454
P T +V +C AG E +E +G V++ + IKG + +A +G
Sbjct: 180 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVG 236
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PS+ Y LI + + A + M++ P N ++ + + A
Sbjct: 389 VPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFC-GQGKVGSAL 447
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G LP+ SY+ M+ A C GD A LF +M E+ ++PD ++ ++ L
Sbjct: 448 KLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCL 507
Query: 247 CRKS 250
+++
Sbjct: 508 TQET 511
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 178/393 (45%), Gaps = 52/393 (13%)
Query: 84 YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT---LKSEHYPVTPSLFTYLIKIY 140
++S Q NF HS S + F+ +DD L + L H P + F L+
Sbjct: 29 FSSSQNNF-HSKSLH------------FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI 75
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
A+ L M F P LN IL H N + AF + K G P+
Sbjct: 76 AKMKHYSTVLSLSTQMDSFGVPPNVYTLN-ILINSFCHLNRVGFAFSVLAKILKLGHQPD 134
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++ ++R C G I A LF+KM + G P+V +Y L+ GLC+ + A+ LL
Sbjct: 135 PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLR 194
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG---------------CN-- 303
M PD + YT++++SLC+ +++ EA+ L +M +G CN
Sbjct: 195 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 254
Query: 304 ------------------PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
PD+V ++TVV C+EG+ +A ++++ M G P++V+Y
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
TL+ G C Q D A K +M+ KGF+P LI G+C + K+D+A + EE+ +
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P T+ ++ +C ++ + +E+V
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV 407
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 166/338 (49%), Gaps = 5/338 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
FS++ IL K H P P+ FT LI+ AL F M++ +P
Sbjct: 120 FSVLAKIL---KLGHQP-DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 175
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L N A L +S + P+ Y ++ + C + ++ A+ LF++M +
Sbjct: 176 LINGLCKVGN-TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 234
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ PD+ +Y L+ LC + LL M+N +PD + ++T++++LC++ K+ EA
Sbjct: 235 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 294
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++++ M +G PD+V Y T++ G C + +A KV + M G P+++SY TL+ G
Sbjct: 295 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 354
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C D A + M K + P + L+ G C+VG++ +A + E++ G+ P
Sbjct: 355 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
T+ +++ +C +E+ +L I + D ++
Sbjct: 415 LVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV 452
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 38/330 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A++ RSM + NC+P I++ L R + AF+
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ-VTEAFN 226
Query: 188 LFKSAHKHGV-----------------------------------LPNTKSYNIMMRAFC 212
LF G+ LP+ ++ ++ A C
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 286
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G ++ A+ + + M +RGV PDV +Y LM G C +S+++ AV + + M+ KGF PD +
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SYTTL+N C+ K+ +A L M K PD YNT++ G C GR DA + +M
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ G +P+LV+Y L+ LC + A ++ + + +P V + +I G C G++
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 466
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ A + L G P T+ +++ +C
Sbjct: 467 EAARDLFSNLSSKGLHPSVWTYNIMIHGLC 496
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + G P+ SY ++ +C I A LF +M + +PD ++Y LM
Sbjct: 329 AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMY 388
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ A+ L +M+ +G +PD ++Y+ LL+SLC+ + L EA LL ++ NP
Sbjct: 389 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNP 448
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI YN ++ G CR G A + ++ S G P++ +Y ++ GLC +G+ + A K
Sbjct: 449 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 508
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M SP + + +GF + A +LEE+L G
Sbjct: 509 MEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 153/321 (47%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
++P +FTY ++A NL + T N K LP + + +++ L + A
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE-GKVTEA 294
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ + GV P+ +Y +M C ++ A +F+ M +G PDV SY L+ G
Sbjct: 295 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 354
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++++A+ L E+M K ++PDT +Y TL+ LC +L++A L M +G PD
Sbjct: 355 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y+ ++ C+ +A +L+ + ++ P++ Y ++ G+C G + A+
Sbjct: 415 LVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 474
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P + +I G C G ++EA + E+ +P T+ I
Sbjct: 475 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 534
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
E + ++L E++ D+
Sbjct: 535 ETLRAIQLLEEMLARGFSADS 555
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ FN + A + FN++ P + + L+ + + + + L M +
Sbjct: 35 NFHSKSLHFN-TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 93
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G P+ + L+NS C ++ A+ +L ++ G PD + T++ G C EG+ +
Sbjct: 94 FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 153
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + + M G PN+V+Y TL+ GLC G A + ++ M P + ++I
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
C +V EA + +++ G +P T+ +V +C E + + +LN++V +I
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273
Query: 445 DTRI 448
D I
Sbjct: 274 DVVI 277
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 199/444 (44%), Gaps = 36/444 (8%)
Query: 31 FCYSSSSQESPSSPEQQQESSISNSKSP------IGSPCRVQKLIASQSDPLLAKEIFDY 84
FC + + + +QQQ S +NSK+ I +L++S + L +F
Sbjct: 32 FCSVQTQKINNEVEQQQQPRSRNNSKTAKTIANLINYKPWSDELLSSFTTSLSKTTVFQT 91
Query: 85 ASR---------------QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE---HY 126
+ F H+ TY I++ LGR K ++ + L +++
Sbjct: 92 LRHIKVPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEV 151
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ F LI+ Y E+ L ++K F +M P N +L L++ R A
Sbjct: 152 KLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVL-LVLLKRGRTNMAK 210
Query: 187 DLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++ K +GV P+T +YNI++R FC N + + F +M PDV +Y L+ G
Sbjct: 211 EVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDG 270
Query: 246 LCRKSQVNRAVDLLEDMLN--KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LCR ++ A +L+ M K PD ++YTTL+ CRK+++ EA +L M +G
Sbjct: 271 LCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLK 330
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+IV YNT++ G C + ++LE M + G +P+ ++ TL+ C G D A K
Sbjct: 331 PNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFK 390
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA-------GEAPHEDTWV 415
+ M S + LI+ C G +A + +EL + G P ++
Sbjct: 391 VFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYK 450
Query: 416 MIVPQICAGEEMEKLGEVLNEIVK 439
+ +C + +K VL +++K
Sbjct: 451 CMFQYLCENGKTKKAERVLRQLMK 474
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-------P 234
L AF +F++ K V ++ SY++++R C GD A LF+++FE+ ++ P
Sbjct: 385 LDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKP 444
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
SY+ + Q LC + +A +L ++ +G D LSY ++ C++ Y LL
Sbjct: 445 LAASYKCMFQYLCENGKTKKAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLL 503
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + PDI Y+ ++ GF R+ + + A + LE M + P ++ +++ L +Q
Sbjct: 504 VWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQ 563
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G + + +M+ + + + S ++ + G D+A + E + K G
Sbjct: 564 GCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNG 615
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 133/318 (41%), Gaps = 11/318 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS-LFTYLIKIYAESNLPDRALKTFRS 155
TY LI L A+ + + +IL +K + + + F LI + + D A K F +
Sbjct: 335 TYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFEN 394
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPA--FD-LFKSA---HKHGVLPNTKSYNIMMR 209
M + + ++ L +Y + FD LF+ +G P SY M +
Sbjct: 395 MKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQ 454
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C NG A + ++ +RG D SY+I++ G C++ LL ML + F+P
Sbjct: 455 YLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLP 513
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D Y L++ RK K A + L +M P +++++ +G ++ V+
Sbjct: 514 DIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVI 573
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M N+ + L D+G+ D A K +L+ GF +++ CN
Sbjct: 574 VMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVKMD---EVVQFLCNK 630
Query: 390 GKVDEACGVLEELLKAGE 407
+ EAC +L LK E
Sbjct: 631 RRALEACKLLLFSLKNNE 648
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 9/244 (3%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY I++ C G Y L M R +PD++ Y L+ G RK + A + LE M
Sbjct: 482 SYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKM 541
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L + P T ++ ++LN L + + E+ ++ M + +I + G
Sbjct: 542 LKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQ 601
Query: 323 IDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A K+ E + NG C V +V LC++ A K + + + + +
Sbjct: 602 DKAFKITELIYKNGFC----VKMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCNI 657
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM--IVPQICAGEEMEKLGEVLNEIVK 439
+I C + K EA + EL+ G H+D + +V + AG E+ + + +
Sbjct: 658 VILDLCKLNKASEAFSLCYELVDKG--LHQDLICLNDLVAALEAGGRTEEAAFISKRVPR 715
Query: 440 VEIK 443
E++
Sbjct: 716 PELR 719
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 37/379 (9%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
V ++ S + A + F + R F H+ T+L +I LGRA + IL+ + +
Sbjct: 15 VYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
L+ +I Y ++ + ++K F+ M E
Sbjct: 75 GLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEEL------------------------- 109
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
GV KSY+ + + G +A FNKM G+ P ++ ++M
Sbjct: 110 -----------GVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMW 158
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G +V A EDM ++ +PD ++Y T++N CR KK+ EA K MK + P
Sbjct: 159 GFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEP 218
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y T++ G+ R DA +++E+M G PN ++Y TL+ GLC+ A+ +
Sbjct: 219 TVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSIL 278
Query: 365 QLMISKGFSP-HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ K +P S+ LI G C G +D A VL+ +++ + +++ C
Sbjct: 279 KEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 424 GEEMEKLGEVLNEIVKVEI 442
E +K ++L+++++ +I
Sbjct: 339 AGEYDKAIKLLDKVIEKDI 357
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + +F KM E GV ++SY L + + R+ +
Sbjct: 73 KKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A ML++G P ++ ++ K+ A + MK + PD+V YNT+V
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMV 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+CR + +A K +M P +V+Y TL+ G D A + ++ M G
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM-IVPQICAGEEMEKLGE 432
P+ L+ G CN K+ EA +L+E+++ AP +++ M ++ C +++
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAAN 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E+Y
Sbjct: 313 VLKAMIRLSVP--TEAGHYGVLIENY 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 119/300 (39%), Gaps = 48/300 (16%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ R K + + +K + T +T LIK Y + D AL+ M
Sbjct: 187 TYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEM 246
Query: 157 LEFNCKP--------LPKQLN--------RILELLVTHRNYLRP---------------- 184
F KP LP N IL+ +V Y+ P
Sbjct: 247 KGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMV--EKYIAPTDNSIFMRLISGQCKA 304
Query: 185 -----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM------ 233
A ++ K+ + V Y +++ +C G+ A L +K+ E+ ++
Sbjct: 305 GDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQST 364
Query: 234 --PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ +Y L++ LC Q +A L+ ++ G V D + TL+ ++ A+
Sbjct: 365 LHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLG-VQDPTALNTLIRGHSQEGSPDSAF 423
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+LL M + + + Y+++V + ++ DA L+ M NG LP+ +R+++ L
Sbjct: 424 ELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
NS ++ LI +A ++L + P + LI+ Y ++ D+A+K
Sbjct: 291 NSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLD 350
Query: 155 SMLEFNCKPLPKQ--------LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++E + P+ N ++E L + + A L + K GV T + N
Sbjct: 351 KVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAK-AEALVRQLMKLGVQDPT-ALNT 408
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R G A+ L M R V + SY L+Q +K++ A L+ M+ G
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENG 468
Query: 267 FVPDTLSYTTLLNSL 281
+PD+ + +++ SL
Sbjct: 469 HLPDSSLFRSVMESL 483
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN N+ L L ++ +LID ++ P LFTY ++ +
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR------GCQPDLFTYGTVVNGLCKRGD 235
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D AL + M + + I++ L ++N + A +LF G+ PN +YN
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYN 294
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++R C G S A L + M ER + P+V ++ L+ ++ ++ A L ++M+ +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD +Y++L+N C +L EA + M K C P++V YNT++ GFC+ R +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M G + N V+Y TL+ GL G D+A+K + M+S G P L+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L K+ P T+ +++ +C ++E
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ ++ L++Y I I S LP AL M++ +P L+
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP-LALAVLGKMMKLGYEPDIVTLSS 155
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L PNT ++N ++ + S A L ++M R
Sbjct: 156 LLNG-YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y ++ GLC++ ++ A+ LL+ M D + YTT++++LC K + +A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M KG P++V YN+++ C GR DA ++L DM PN+V++ L+
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K MI + P +LI GFC ++DEA + E ++ P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ E+ E+ + + G+T
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 169/383 (44%), Gaps = 3/383 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNS--TYLILILKLGRAKYFSLID 115
P+ S KL+++ + + R N R S +Y ILI R L
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + Y + L+ Y A+ M +P N ++ L
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
H N A L G P+ +Y ++ C GDI +A +L KM + + D
Sbjct: 196 FLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y ++ LC VN A++L +M NKG P+ ++Y +L+ LC + +A +LL
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M + NP++V ++ ++ F +EG+ ++A K+ ++M P++ +Y +L+ G C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D AK +LMISK P+ + LIKGFC +V+E + E+ + G + T+
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 416 MIVPQICAGEEMEKLGEVLNEIV 438
++ + + + ++ ++V
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMV 457
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +FTY LI + + D A F M+ +C P N +++ + +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR-VEEG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +YN +++ GD +A +F KM GV PD+ +Y IL+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + PD +Y ++ +C+ K+ + + L C + +KG P+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y T++ GFCR+G +A + +M +G LPN +Y TL+ G + + ++
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 366 LMISKGF 372
M S GF
Sbjct: 595 EMRSCGF 601
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF + LP+ +N ++ A + +L +M + D+ SY I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ PD ++ ++LLN C K++ EA L+ +M V
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+L +Y T+V GLC +G D+A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + +I CN V++A + E+ G P+ T+ ++ +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 301 CNYGRWSDASRLLSDMIERKI 321
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI + + A K + M++ + P + ++ H + L A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEA 379
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ PN +YN +++ FC + LF +M +RG++ + +Y L+QG
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + A + + M++ G PD ++Y+ LL+ LC+ KL +A + ++ PD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C+ G+ D + + G PN++ Y T++ G C +G+ + A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P+ + LI+ G + +++E+ G T M++ + G
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 230 RGVMPDVESYRI---LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
RGV SY L + + +++ AVDL +M+ +P + + LL+++ + K
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L RM+ + D+ YN ++ FCR + A VL M G P++V+ +
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C A + M + P+ + LI G K EA +++ ++ G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD----TRIVEA 451
P T+ +V +C +++ +L ++ K +I+ D T I++A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
>gi|449485620|ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 7/337 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L + F ++ R N+RH+ ++Y I++ + F + +L + + YPVT F L
Sbjct: 133 LGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMIL 192
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY--LRPAFD-LFKSAH 193
I E+ L R ++ F FN +P N IL LV + Y + +D + H
Sbjct: 193 ICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDH 252
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
P+ +YN+++ + C G + + L ++M +G PD +Y IL+ L + +
Sbjct: 253 S----PDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPL 308
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++LL M GF P+ L +TTL+N L R L + GC PD+V Y ++
Sbjct: 309 AALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMI 368
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
F G+ A ++M G LPN+ +Y +++ G C G F A + M S+G
Sbjct: 369 TSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCR 428
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
P+F V L+ N GK+ EA V++ +++ G+ H
Sbjct: 429 PNFLVYSTLVSYLRNAGKLGEAHKVIKRMVENGQYAH 465
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 7/280 (2%)
Query: 68 LIASQSDPLLAKEIFD--YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
LI + + LAK + + S+ NFR +Y ++ L K + LI + + +
Sbjct: 192 LICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDD 251
Query: 126 YPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ +P + TY + +++ L D+ + M P N +L +L L
Sbjct: 252 H--SPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPL- 308
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +L + G PN + ++ G++ F+++ G +PDV Y +++
Sbjct: 309 AALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMI 368
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
Q +A ++M+ KG +P+ +Y +++ C K +EAY +L M+ +GC
Sbjct: 369 TSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCR 428
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
P+ + Y+T+V G+ +A KV++ M NG +L++
Sbjct: 429 PNFLVYSTLVSYLRNAGKLGEAHKVIKRMVENGQYAHLMT 468
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 166/343 (48%), Gaps = 5/343 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I L + + + DI +K++ ++P++FTY LI+ + A
Sbjct: 264 TYSTIIDSLCKDRRVNEALDIFSYMKAK--GISPNIFTYNSLIQGLCNFSRWREASAMLN 321
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ N P + ++ + N A + K+ + GV PN +Y+ +M +
Sbjct: 322 EMMSLNIMPNIVTFSLLINIFCKEGNVFE-ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 380
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
++ A LF+ M +G PDV SY IL+ G C+ ++ A L +M+++G PD +SY
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL++ LC+ +LREA+ L M G PD+ Y+ ++ GFC++G A ++ M S
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
PN+V Y L+ +C A+K + +G P+ + +I G C G +DE
Sbjct: 501 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDE 560
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
A + + G P+E ++ +I+ ++ + +++ E+
Sbjct: 561 ALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 603
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 140/268 (52%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL F ML +P Q N++L +V R+Y L K G+ P+T + ++
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ F + + +++ K+ + G+ + ++ L+ GLC+ + +AV+L +DM+ +G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ PD +YTT++N LC+ + A L +M GC PD+V Y+T++ C++ R +A
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ M + G PN+ +Y +L+ GLC+ + A + M+S P+ LI F
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C G V EA GVL+ + + G P+ T+
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTY 370
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 120/238 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF G P+ +Y ++ C G+ A LF KM E G PDV +Y ++
Sbjct: 211 AVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ +VN A+D+ M KG P+ +Y +L+ LC + REA +L M P
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+IV ++ ++ FC+EG +A VL+ M G PN+V+Y +L+ G Q A+K
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+MI+KG P + LI G+C ++ EA + E++ G P ++ ++ +C
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC 448
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 129/239 (53%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF+ + G P+ +Y+ ++ + C + ++ A +F+ M +G+ P++ +Y L+
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
QGLC S+ A +L +M++ +P+ ++++ L+N C++ + EA +L M G
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V Y++++ G+ + ++A K+ + M + GC P++ SY L+ G C AK+
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
MI +G +P + LI G C +G++ EA + + +L G P T+ +++ C
Sbjct: 425 FNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ Y+ A K F M+ CKP N ++ + + A
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR-IGEA 421
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF G+ P+ SYN ++ C G + A+ LF M G +PD+ +Y IL+ G
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + +A L M + P+ + Y L++++C+ + L+EA KL + V+G P+
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 541
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y T++ G C+EG +A + +M +GC PN SY ++ G A + +
Sbjct: 542 VQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 601
Query: 366 LMISKGF 372
M KGF
Sbjct: 602 EMREKGF 608
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F+Y LI Y ++ A + F M+ P N +++ L LR A D
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC-QLGRLREAHD 458
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK+ +G LP+ +Y+I++ FC G ++ A+ LF M + P++ Y IL+ +C
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 518
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A L ++ +G P+ YTT++N LC++ L EA + M+ GC P+
Sbjct: 519 KSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEF 578
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
YN ++ GF + A +++ +M G + ++ +
Sbjct: 579 SYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 3/230 (1%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV-DLLEDMLNKGFVPDTL 272
N D ++AY FN M R P + + L+ + + + AV L + M G PDT
Sbjct: 101 NIDDALAY--FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTY 158
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ L+N + +++ + +L ++ G IV +NT++ G C+ G+ A ++ +DM
Sbjct: 159 TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ G P++ +Y T++ GLC G A + M G P +I C +V
Sbjct: 219 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+EA + + G +P+ T+ ++ +C + +LNE++ + I
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNI 328
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 157/343 (45%), Gaps = 39/343 (11%)
Query: 108 AKYFSLIDDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+K F LI D L ++ + P +F + + Y +NLP A++ F M +F K
Sbjct: 100 SKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVG 159
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
++++L +L R +++ A + F + V+PN K+Y+I+MR + GD S A LF +
Sbjct: 160 DVDQLLYVLCK-RKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEE 217
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M ERG DV +Y L++ LC+ V+ A L +M + G PD SY+ + + C
Sbjct: 218 MRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVND 277
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ A+++L RM+ P++ YN +V C+ + +A ++L++M G P+L SY
Sbjct: 278 IHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNA 337
Query: 347 LVGGLCDQ-----------------------------------GMFDVAKKYMQLMISKG 371
+ CD G FD M +G
Sbjct: 338 IQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERG 397
Query: 372 FSPHFSVSHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDT 413
F P S ++ GFC GK++EAC E ++ G P+ T
Sbjct: 398 FYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCT 440
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++ RA+C A F++M + GV V L+ LC++ V +A + D +
Sbjct: 126 FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFF-DKV 184
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
N +P+ +Y+ L+ EA KL M+ +GC D+V YN+++ C+ G
Sbjct: 185 NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD 244
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A K+ +M SNG P+ SY + C+ A + + M P+ + ++
Sbjct: 245 EAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIV 304
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
K C KVDEA +L+E+++ G +P D W
Sbjct: 305 KKLCKSEKVDEAYQLLDEMIERGVSP--DLW 333
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 13/285 (4%)
Query: 78 AKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
A+E FD + + PN + TY IL+ G S + ++ V +
Sbjct: 177 AQEFFDKVNVEVMPNAK----TYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNS 232
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ + D A K FR M P + I N + AF + ++
Sbjct: 233 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYS-IFIRAYCEVNDIHSAFQVLDRMRRY 291
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
++PN +YN +++ C + + AY L ++M ERGV PD+ SY + C +VN+A
Sbjct: 292 NLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKA 351
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L+ M + +PD +Y +L L R + + M+ +G P Y +V G
Sbjct: 352 LRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHG 411
Query: 316 FC-REGRAIDACKVLEDMPSNG-----CLPNLVSYRTLVGGLCDQ 354
FC ++G+ +ACK E M +G C L+ R + G +Q
Sbjct: 412 FCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQ 456
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
E + ++ + CR + A+ M + G LL LC++K +++A + +
Sbjct: 124 EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK 183
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ V+ P+ Y+ ++ G+ G + +A K+ E+M GC ++V+Y +L+ LC G
Sbjct: 184 VNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGN 242
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A K + M S G +P I+ +C V + A VL+ + + P+ T+
Sbjct: 243 VDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNC 302
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
IV ++C E++++ ++L+E+++ + D
Sbjct: 303 IVKKLCKSEKVDEAYQLLDEMIERGVSPD 331
>gi|225425092|ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 10/369 (2%)
Query: 50 SSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQ-PNFRHSNSTYLILILKLGRA 108
+ S P + + + S+ DP IF + S FR Y + +L R+
Sbjct: 15 ARFSTLSDPFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRS 74
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L++ ++ K+ +P T + LI +Y+ S + D AL+TF M++ + K L
Sbjct: 75 GRLDLVERLIDHQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSL 134
Query: 169 NRILELLVTHR--NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
IL + + + + L F+ S + GV P TKSY+++++AFC D+ A L +K
Sbjct: 135 CAILTVYLDNDLIDQLHTVFNTMPS--EIGVSPGTKSYSLVLKAFCQQKDMESARKLLHK 192
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M PD+ SY +L++ ++L+++ NKG D +Y + C+ K+
Sbjct: 193 MEN----PDIGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTTYNHRILRFCKNKE 248
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYR 345
A KLL M KG P+ YN ++ GFC+ G A KVL M ++G + P +SY
Sbjct: 249 SVRAKKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRMLADGYVAPCSISYI 308
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
TL + +G FD A + +I + + P F L+KG + KV+ A V+E++ K
Sbjct: 309 TLFQHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISKVEAAKEVVEKMKKR 368
Query: 406 GEAPHEDTW 414
+ D+W
Sbjct: 369 LKGNAADSW 377
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 138/243 (56%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++P+ SY ++ C G+I A L KM E G + +Y L++GLC +N++
Sbjct: 15 GIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQS 74
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ LL+ ++ KG VP+ +Y+ LL + +++ + EA KLL + KG P++V YN ++ G
Sbjct: 75 LQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTG 134
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+EGR +A + D+PS G PN+VSY ++ LC +G ++ A + + M S+ SP
Sbjct: 135 LCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPS 194
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+++ A VL+E+++A P T+ I+ +C +++ + + L+
Sbjct: 195 LVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLD 254
Query: 436 EIV 438
+++
Sbjct: 255 QMI 257
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 131/240 (54%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A L + ++G NT +YN ++R C +G+++ + L +K+ +G++P+ +
Sbjct: 33 RGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFT 92
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L++ ++ VN A+ LL++++ KG+ P+ +SY LL LC++ + EA + +
Sbjct: 93 YSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 152
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG NP++V YN ++ C EGR +A ++L +M S P+LV+Y L+G L G +
Sbjct: 153 SKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIE 212
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M+ F P + + +I C GK+D L++++ P+E T+ I
Sbjct: 213 HAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIA 272
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 154/348 (44%), Gaps = 39/348 (11%)
Query: 128 VTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P+ FTY L Y E + + A+K ++ +P N +L L
Sbjct: 86 LVPNEFTYSFLLEAAYKERGV-NEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKE-GRTEE 143
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A F+ G PN SYNI++R+ C G A L +M P + +Y IL+
Sbjct: 144 AIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIG 203
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L ++ A ++L++M+ F P +Y ++ LC++ KL K L +M CNP
Sbjct: 204 SLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNP 263
Query: 305 D---------------------IVH-------------YNTVVLGFCREGRAIDACKVLE 330
+ I+ Y V+ CR+G A ++L
Sbjct: 264 NEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLY 323
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G +P+ +Y +L+ GLC +GM D A + +L+ + P +ALI GFC G
Sbjct: 324 EMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSG 383
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ D + +LE +++ G P+E T+ +IV I EE E EVL E++
Sbjct: 384 RTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELL 431
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 35/227 (15%)
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A ++E M+ G +PD SYT L+N+LC++ + A +L+ +M+ G + V YN+
Sbjct: 1 MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60
Query: 312 VVLGFCREG----------------------------------RAI-DACKVLEDMPSNG 336
+V G C G R + +A K+L+++ + G
Sbjct: 61 LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PNLVSY L+ GLC +G + A ++ + + SKGF+P+ + +++ C+ G+ +EA
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+L E+ +P T+ +++ + +E EVL+E+V+ K
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFK 227
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 142/253 (56%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + K G+ P+ S+N +M + GD+ + L N M GV PDV +Y +L+
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLIN 203
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++S+++ A ++ ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M + P
Sbjct: 204 GLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXP 263
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A ++
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHR 323
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI + ALI G C + +A VL E+L G P T+ MI+ + C
Sbjct: 324 KRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKK 383
Query: 425 EEMEKLGEVLNEI 437
++ ++L E+
Sbjct: 384 GDVWTGSKLLKEM 396
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 1/315 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A + +R E ++LE L+ + Y + + ++
Sbjct: 57 VFSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 115
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC GDI +A ++FN + + G+ P V S+ LM G R
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGD 175
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A ++ M KG P+ V + T
Sbjct: 176 MDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTT 235
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M KG
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 295
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + +++ + + ++ +C E
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAE 355
Query: 432 EVLNEIVKVEIKGDT 446
+VL E++ V +K DT
Sbjct: 356 KVLREMLSVGLKPDT 370
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A DL
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLC-KKGDLKQAHDLIDEM 291
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERY 351
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
A +L +ML+ G PDT +YT ++N C+K + KLL M+
Sbjct: 352 LDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 146/278 (52%), Gaps = 9/278 (3%)
Query: 136 LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
++ ++ + +PD AL FR++ C P + N +L+ V R + D F ++
Sbjct: 89 VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRF--SDADAFFASLS 146
Query: 195 HG-----VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
HG + PN ++YNI++R+ C GD+ A TLF+ + R V PD +Y LM GL ++
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVH 308
+++ A+DLL++M G PD + Y LL + + + ++ ++ K G P++
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN ++ G C+ GR + +V E M +N P++++Y L+ GLC G D A + +I
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G ++ ++L+KGFC G+V EA + AG
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG 364
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 1/235 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +++ K G PN+ YN ++ FC S A +++KM + G P V +Y L+
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLID 517
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + A + +M+ GF PD +Y +L+ L KK+ +A + ++ KG
Sbjct: 518 GLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKV 577
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D++ +N ++ G C G+ +A V DM C PNLV+Y TL+ GL + G D A
Sbjct: 578 DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL 637
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G P + IKG C+ ++ E +L+E+L G P TW ++V
Sbjct: 638 WTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 167/368 (45%), Gaps = 44/368 (11%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
++D + P R + +TY +++ L + F + ++ + + + + P + TY I I+
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN--LQPDVITYGILIH 307
Query: 141 A--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL 198
S D A + + +++ N +++ ++ A+ + SA G L
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC-QAGRVQEAWKFWDSAGFAG-L 365
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV--MPDVESYRILMQGLCRKSQVNRAV 256
N ++YNIM++ +G + A L++ + E+ V +PD ++ L+ GLC+ N+A
Sbjct: 366 RNLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLIHGLCQNGFANKAF 424
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ E+ G D SY++++N LC +L +A K+ +M GC P+ YN ++ GF
Sbjct: 425 TIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGF 484
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ R DA ++ M NGC P +++Y TL+ GLC + A + M+ GF+P
Sbjct: 485 CQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDI 544
Query: 377 SVSHALIKGF-----------------------------------CNVGKVDEACGVLEE 401
+ +LI+G C+ GKVDEA V +
Sbjct: 545 TTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604
Query: 402 LLKAGEAP 409
+ + P
Sbjct: 605 MKEKKNCP 612
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 174/427 (40%), Gaps = 80/427 (18%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP--VTPSLFTYLI---KIYAE 142
P R N+ L+ RA+ FS D +L + + P+L TY I + A
Sbjct: 116 NPGIRSHNA----LLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCAR 171
Query: 143 SNLPDRALKTFRSMLEFNCKP-----------LPKQ--LNRILELL------------VT 177
+L DRA+ F S+ P L KQ L+ L+LL V
Sbjct: 172 GDL-DRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVC 230
Query: 178 HRNYLRPAFD----------LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+ L F K G PN +YN+M+ C G ++ +M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ PDV +Y IL+ GLCR V+ A + +++ G V D Y +L+ C+ ++
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350
Query: 288 REAYKLL-------------CRMKVKG----------------------CNPDIVHYNTV 312
+EA+K + +KG C PD V + T+
Sbjct: 351 QEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTL 410
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G A A + E+ +G ++ SY +++ GLC+ G A K + M G
Sbjct: 411 IHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGC 470
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ + +ALI GFC V + +A + ++ G +P T+ ++ +C E+ ++
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530
Query: 433 VLNEIVK 439
V E+V+
Sbjct: 531 VAREMVE 537
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G++ + YN +++ FC G + A+ ++ G + ++ +Y I+++GL V+
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVD 385
Query: 254 RAVDLLEDMLNKGF--VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++L D+L K +PDT+++ TL++ LC+ +A+ + +V G D+ Y++
Sbjct: 386 EAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C GR +DA KV E M +GC PN Y L+ G C A + M G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP + LI G C K EA V E+++ G P T+ ++ + + ++++
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 432 EVLNEIVKVEIKGDT 446
+ +I+ +K D
Sbjct: 565 SIWKQILYKGLKVDV 579
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+K + M + CKP N ++ +R A ++ +G P +YN +
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT--SDAVRIYSKMADNGCSPTVITYNTL 515
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C A ++ +M E G PD+ +Y L++GL +++ A+ + + +L KG
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDAC 326
D + + L++ LC K+ EA + MK K C P++V YNT++ G G A
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + +G P+++SY T + GLC + + ++S+G P + L++
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695
Query: 387 CNVGKV 392
G +
Sbjct: 696 IKYGPI 701
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 113 LIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
L+D + + K + P+ ++ LI + + A++ + M + C P N
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ L Y + A + + ++G P+ +Y ++R + I A +++ ++ +
Sbjct: 515 LIDGLCKAEKY-QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL-SYTTLLNSLCRKKKLRE 289
G+ DV + IL+ GLC +V+ A+ + DM K P L +Y TL++ L + +
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A L + G PDI+ YNT + G C R + ++L+++ S G +P ++++ LV
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693
Query: 350 GLCDQGMFDV 359
+ G V
Sbjct: 694 AVIKYGPIQV 703
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 228 FERGVMPD--VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
F R +MPD ++++R L L G P S+ LL++ R +
Sbjct: 93 FSRAIMPDAALDAFRALPSIL-------------------GCNPGIRSHNALLDAFVRAR 133
Query: 286 KLREAYKLLCRMK----VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
+ +A + + P++ YN V+ C G A + + + P+
Sbjct: 134 RFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDC 193
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
++Y TL+ GL Q D A + M G P +AL+ G G+ ++ V ++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 402 LLK-AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
L+K G P+ T+ +++ +C +++GEV +V ++ D ++ GI
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPD--VITYGI 304
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 174/345 (50%), Gaps = 5/345 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ ++I L + F D++ +K+ + +PS+ TY +I Y ++ +A +
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKA--WGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P N +++ N + A +F+ + G+ PN +YN ++ C N
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDEN-VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A L +KM G+ P+V +Y L+ G C+K + A ++L+D+ +G P+ +++
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL+++ + ++ +A+ L M G P++ YN +++GFCREG +A K+ ++M
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
NG +LV+Y LV LC +G A + + M G +P +ALI G+ G
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTA 527
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A V + K G + T+ +++ C ++E+ +LNE+++
Sbjct: 528 ALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 132/259 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A D+ + G P+ +YN ++ +C G + A L +M + + P+ ++ I
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CR V A + E+M +G P+ ++Y +L+N LC KL EA L +M G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YN ++ GFC++ +A ++L+D+ G PN++++ TL+ G D A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+M+ G P+ S + LI GFC G V EA + +E+ G T+ ++V +
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 422 CAGEEMEKLGEVLNEIVKV 440
C E K +L+E+ +V
Sbjct: 485 CKKGETRKAVRLLDEMFEV 503
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + F A +G + S N M+ + G I + +++ +M R + +V ++ +++
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + +A D++EDM GF P ++Y T+++ C+ K+ +A LL M K +P
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + +N ++ GFCR+ A KV E+M G PN+V+Y +L+ GLC G D A
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P+ +ALI GFC + EA +L+++ K G AP+ T+ ++
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 425 EEME 428
M+
Sbjct: 418 GRMD 421
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 179/398 (44%), Gaps = 18/398 (4%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-KS 123
+Q L S++ P L F + ++ H+ + L+ L AK ++ I +L + K+
Sbjct: 77 LQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKN 136
Query: 124 EHYP----------------VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
HY + L+ Y ++ D AL+ F ++ +
Sbjct: 137 AHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS 196
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N +L LV + ++K + + N ++++++ C G A + M
Sbjct: 197 CNPMLVSLV-KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G P V +Y ++ G C+ ++ +A LL++M+ K P+ +++ L++ CR + +
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
A K+ M+ +G P++V YN+++ G C G+ +A + + M G PN+V+Y L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C + M A++ + + +G +P+ + LI + G++D+A + +L G
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
P+ T+ ++ C +++ ++ E+ +K D
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV PN +YN ++ FC G++ A L +M G+ D+ +Y IL+ LC+K + +A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
V LL++M G P L+Y L++ R+ A + M+ KG +IV YN ++ G
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
FC +G+ +A ++L +M G +PN +Y L + ++G
Sbjct: 554 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + L TY L+ + +A++ M E P N +++ N
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNS 525
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A ++ K G N +YN++++ FC G + A L N+M E+G++P+ +Y I
Sbjct: 526 -TAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
L ++M+ KGF+PD
Sbjct: 585 LR----------------DEMMEKGFIPD 597
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 192/426 (45%), Gaps = 8/426 (1%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
++PE + S+ N + V L + +LA F +A +Q F H+ + L
Sbjct: 67 TTPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHAL 126
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
I LG+ + F +I +++ +K + F+ + + Y + + ALKTF M ++
Sbjct: 127 IEALGKIRQFKMIWNLVDEMKQRKL-LNGDTFSLIARRYVRAKVIKEALKTFERMEKYGL 185
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
KP N+++++L + ++ A +LF + + PN KSY I++ + ++
Sbjct: 186 KPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVD 245
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ +M + G PDV +Y I++ C+ + + A+ + DML+K P Y T + L
Sbjct: 246 EVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGL 305
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
++ EA++ + K G P+ YN VV +C R DA +++ +M G PN
Sbjct: 306 GNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNA 365
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+Y ++ L G A Q M S+ G P S +++ FCN ++D A V
Sbjct: 366 RTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWN 425
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA------GIG 454
E+ G P + ++ +C +++ +++ V I+ + A G
Sbjct: 426 EMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAG 485
Query: 455 LEDYLI 460
+E+ +I
Sbjct: 486 MENTVI 491
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 143/250 (57%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ P +YN +M + ++ A ++FN M + GV PD++SY IL+ G C+ ++
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL++M +K +P+ ++Y++L++ LC+ K+ A KL+ M +G P+IV Y++++
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ + +A +L M + G PN+ +Y L+ GLC G + A+K + ++ KG +
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ +I+GFC+ G DEA +L ++ G P+ T+ +I+ + +E E ++L
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445
Query: 435 NEIVKVEIKG 444
E+++ G
Sbjct: 446 CEMIETNFDG 455
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 13/329 (3%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCK 162
L ++K++ + + ++ K E + P+L LI + + A +L+ K
Sbjct: 72 LVKSKHYHTV--LYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYK 129
Query: 163 PLPKQLNRILELLV----THRNY-----LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
P LN +++ L H + L+ A DLF + P+ ++ I++ FC
Sbjct: 130 PNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCK 189
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A + M +G+ P V +Y LM G QVN+A + M G PD S
Sbjct: 190 EGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQS 249
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ L+N C+ K + EA +LL M K P++V Y++++ G C+ G+ A K++++M
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMH 309
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+V+Y +++ LC D A + M ++G P+ LIKG C GK++
Sbjct: 310 DRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLE 369
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+A V E+LL G + T+ +++ C
Sbjct: 370 DARKVFEDLLVKGHNLNVYTYTVMIQGFC 398
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 3/265 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY L+ Y ++A F +M + P + + ++ + + A
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIK-MMDEA 266
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L K H ++PN +Y+ ++ C +G IS A L ++M +RG P++ +Y ++
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 326
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ QV+ A+ LL M N+G P+ +YT L+ LC+ KL +A K+ + VKG N +
Sbjct: 327 LCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLN 386
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ GFC +G +A +L M NGC+PN +Y ++ L + ++A+K +
Sbjct: 387 VYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLC 446
Query: 366 LMISKGFSPHFSVSHALIKGFCNVG 390
MI F ++++ LI G
Sbjct: 447 EMIETNFDGRVALTNDLIASIWVTG 471
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 132/297 (44%), Gaps = 30/297 (10%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+L + P+ K+ + L+ TH N++ P F + H N
Sbjct: 2 LLRYGFVPVSKKFHSFQFLINTHFNFI-PYFSTSTTFHN-------------------NN 41
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
D+ A +LFN++ ++ P + ++ L + + + L + M +G P+ ++
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA----------IDA 325
L+NS C+ + A+ +L ++ G P+ + NT++ G C G+ DA
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ M P++ ++ LV G C +G AK + +M+ +G P ++L+ G
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ V +V++A + + + G +P ++ +++ C + M++ E+L E+ +I
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 10/210 (4%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ V+ AV L +L + P + + +L SL + K L +M+ +G P++V
Sbjct: 39 NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC------DQ----GMF 357
+ N ++ FC+ G A VL + G PN ++ TL+ GLC D+ G
Sbjct: 99 NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A MI + +P L+ GFC G+V EA VL ++ G P T+ +
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+ +++ K + N + ++ + D +
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQ 248
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 133/257 (51%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ AF L ++P+ ++++++ C G++S A + M E GV PDV +Y L
Sbjct: 283 KEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTL 342
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
M G C + +V A + E M++KG +PD S++ L+N C+ K++ EA +L M +G
Sbjct: 343 MNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V YNT++ G C+ R ++A ++ +DM SNG PNLV+Y L+ L QG D A
Sbjct: 403 IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMG 462
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M + G P + +I G C GK +A + EL G P+ + +C
Sbjct: 463 LFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVC 522
Query: 423 AGEEMEKLGEVLNEIVK 439
G +++ + ++ K
Sbjct: 523 KGGLLDEAHKAFRQMEK 539
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 3/269 (1%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H +Y F + K G+ PN +++ ++ FC G I A LF+ M RG P+V
Sbjct: 141 HVDY---GFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVH 197
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY I+++GLCR + + LLE M G PD + Y T+++ LC+ + + EA + C+M
Sbjct: 198 SYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 257
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K G P +V Y +++ G GR +A +L +M +P+LV++ L+ +C +G
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEV 317
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A+ ++ M G P + + L+ G+C +V EA V E ++ G P ++ ++
Sbjct: 318 SEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
V C + +++ ++ +E+ + DT
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDT 406
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 143/286 (50%), Gaps = 3/286 (1%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY I+ NL A M N P + +++++ + A
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM-CKEGEVSEA 320
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ K+ + GV P+ +YN +M +C ++ A +F M +G MPDV S+ IL+ G
Sbjct: 321 RVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNG 380
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A L ++M ++G +PDT+SY TL++ LC+ ++ EA +L M G P+
Sbjct: 381 YCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPN 440
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y+ ++ ++G A + M ++G P+LV+Y ++ G+C G F A++
Sbjct: 441 LVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFA 500
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+ KG P+ V I G C G +DEA ++ K +P +
Sbjct: 501 ELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 6/297 (2%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
N+ D AL F M+ N PLP + + LV ++Y + L K G+ +
Sbjct: 71 NIND-ALSAFNHMV--NTNPLPSIVKFGELFSALVRMKHY-KTVVSLSKQMEMAGISHDV 126
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
S I++ FC + +++ K+ + G+ P+V ++ L+ G C + ++ RA++L +
Sbjct: 127 LSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDV 186
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M+ +G+ P+ SY+ ++ LCR K E KLL MKV GC PD+V YNT+V C++
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A + M G LP +V+Y +L+ GL + G + A + M P
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI C G+V EA +L+ + + G P T+ ++ C E+ + +V ++
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI 363
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 7/334 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA L D + + Y ++ +IK +K M C+P
Sbjct: 176 KIGRA--IELFD----VMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEP 229
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N I++ L R + A +F G+LP +Y ++ G A+ L
Sbjct: 230 DVVIYNTIVDRLCKDR-LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGL 288
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
N+M +MPD+ ++ +L+ +C++ +V+ A +L+ M G PD +Y TL+N C
Sbjct: 289 LNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCL 348
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ ++ EA K+ M KG PD+ ++ +V G+C+ R +A ++ ++M G +P+ VS
Sbjct: 349 RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVS 408
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ GLC A++ + M S G+ P+ L+ G +D+A G+ +
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAME 468
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+G P T+ +++ +C + + E+ E+
Sbjct: 469 NSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 1/270 (0%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
T RN + A F LP+ + + A +L +M G+ DV
Sbjct: 68 TFRN-INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDV 126
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
S IL+ CR V+ +L ++ G P+ ++++TL+N C + K+ A +L
Sbjct: 127 LSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDV 186
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M +G P++ Y+ ++ G CR G+ + K+LE M GC P++V Y T+V LC +
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A M G P +LI G N+G+ EA G+L E+ P + +
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ +C E+ + +L + ++ ++ D
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDV 336
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 187/423 (44%), Gaps = 40/423 (9%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I R+ + QSDP A + + A + +F S++ Y ++ KLG A F L++ ++
Sbjct: 53 ISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLV 112
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE---FNCKPLPKQLNRILELL 175
++ E + V + ++ YA D A+ + L+ F + N +L +L
Sbjct: 113 REMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVL 172
Query: 176 V---------------THR-------------------NYLRPAFDLFKSAHKHGVLPNT 201
V T R + +R A + + HGV P+
Sbjct: 173 VEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDE 232
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
++ +M+ F G I A + KM E G P + +L+ G C+ +V A+ ++
Sbjct: 233 TTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
+ GF PD ++Y T ++ LC+ + A K++ M +G +PD+ YNTV+ + G
Sbjct: 293 EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ M GCLP+ ++ TL+ L Q + A + + KG SP +
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI C VG + EE+ +G P E T+ +++ +C+ M KLG L+ + ++E
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCS---MGKLGNALDLLNEME 469
Query: 442 IKG 444
G
Sbjct: 470 SNG 472
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 171/375 (45%), Gaps = 45/375 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY +I +++ D A M++ C P N ++ + ++ +N L A D
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI-VALSSQNRLEEALD 393
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ P+ ++NI++ A C GD + LF +M G PD +Y IL+ LC
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ A+DLL +M + G T++Y T++++LC+K ++ EA ++ +M +G + V
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C+ R DA +++E M G PN ++Y +++ C QG A ++ M
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVD---------------------------------- 393
+ GF LI G C G+
Sbjct: 574 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633
Query: 394 -EACGVLEELLKAGEAPHEDTWVMIVPQICAG-----EEMEKLGEVLNEIVKVEIKGDTR 447
+A + E+ + GE P T+ ++ +C G E + L E++N+ E
Sbjct: 634 RDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 693
Query: 448 IVEA--GIGLEDYLI 460
+ E +G++DYLI
Sbjct: 694 LAEGLLNLGMDDYLI 708
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 160/326 (49%), Gaps = 5/326 (1%)
Query: 117 ILITLKSEHYPVTP--SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L+ + + V P + FT L++ + E + AL+ M+E C P +N ++
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
+ A + G P+ +YN + C NG +S A + + M + G P
Sbjct: 277 YC-KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y ++ L + +++ A ++ M+++G +PDT ++ TL+ +L + +L EA L
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+ VKG +PD+ +N ++ C+ G ++ E+M S+GC P+ V+Y L+ LC
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A + M S G P +V++ +I C +++EA V +++ G + T
Sbjct: 456 GKLGNALDLLNEMESNG-CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++ +C + ++ E++ ++VK
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVK 540
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
ESN R+ T+ ++++ CK + RI E A ++F G+ +
Sbjct: 469 ESNGCPRSTVTYNTIIDALCKKM-----RIEE-----------AEEVFDQMDAQGISRSA 512
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
++N ++ C I A L +M + G+ P+ +Y ++ C++ + +A D+LE
Sbjct: 513 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILET 572
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M GF D ++Y TL+N LC+ + + A KLL M++KG P YN V+ R
Sbjct: 573 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 632
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQLMISKGFSPHFSVSH 380
DA + +M G P+ ++Y+ + LC G A ++ M++KGF P FS
Sbjct: 633 LRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 692
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
L +G N+G D +E +++ + D
Sbjct: 693 MLAEGLLNLGMDDYLISAIELIIEKAKFRESDA 725
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN N TY ++ + DIL T+ + + + + LI ++
Sbjct: 544 QPN----NITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 599
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
ALK R M +P PK N +++ L RN LR A +LF+ + G P+ +Y I+
Sbjct: 600 VALKLLRGMRIKGIRPTPKAYNPVIQSLF-RRNNLRDALNLFREMTEVGEPPDALTYKIV 658
Query: 208 MRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
R+ C G I A+ +M +G MP+ S+R+L +GL + + +E ++ K
Sbjct: 659 FRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKA 718
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 186/421 (44%), Gaps = 38/421 (9%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I R+ + Q+DP A ++ + A + +F S + Y +I KLG A F L++ ++
Sbjct: 53 ISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLV 112
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELL-- 175
++ E + + ++ YA D A+ R+ L F + N +L +L
Sbjct: 113 REMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAE 172
Query: 176 -------------VTHR-------------------NYLRPAFDLFKSAHKHGVLPNTKS 203
+T R + +R A + + H V P+ +
Sbjct: 173 GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETT 232
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ +M+ F G I A + KM E G P + +L+ G C+ +V A+ ++ +
Sbjct: 233 FTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
GF PD ++Y T ++ LC+ + A K++ M +G +PD+ YNTV+ + G
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 352
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A ++ M GCLP+ ++ TL+ LC Q + A + + KG SP + LI
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C VG + EE+ +G AP E T+ +++ +C+ M KL L+ + ++E
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS---MGKLVNALDLLKEMESN 469
Query: 444 G 444
G
Sbjct: 470 G 470
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 168/354 (47%), Gaps = 36/354 (10%)
Query: 117 ILITLKSEHYPVTP--SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN----- 169
+L+ + + V P + FT L++ + E + AL+ M+E C P +N
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274
Query: 170 -----RILELLVTHRNYLRPAFD------------LFKSAH------------KHGVLPN 200
R+ + L + + F+ L ++ H + G P+
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YN ++ NG++ A + N+M +RG +PD ++ L+ LC ++++ A+DL
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
++ KG PD ++ L+N+LC+ +L MK GC PD V YN ++ C G
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ ++A +L++M SNGC + V+Y T++ LC Q + A++ M + G S +
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
LI G C ++D+A ++E+++K G P T+ I+ C +++K ++L
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADIL 568
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 170/375 (45%), Gaps = 45/375 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY +I +++ D A M++ C P N ++ L + +N L A D
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCS-QNRLEEALD 391
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ P+ ++NI++ A C GD + LF +M G PD +Y IL+ LC
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ A+DLL++M + G T++Y T++++LC++ ++ EA ++ +M G + V
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAV 511
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C+ R DA +++E M G P+ ++Y +++ C QG A ++ M
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVD---------------------------------- 393
+ GF LI G C G+
Sbjct: 572 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631
Query: 394 -EACGVLEELLKAGEAPHEDTWVMIVPQICAG-----EEMEKLGEVLNEIVKVEIKGDTR 447
+A + E+ + GE P T+ ++ +C G E + L E++N+ E
Sbjct: 632 RDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 691
Query: 448 IVEA--GIGLEDYLI 460
+ E +G++DYLI
Sbjct: 692 LAEGLLNLGMDDYLI 706
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 39/323 (12%)
Query: 128 VTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P ++T+ I I A + P ++ F M C P N +++ L + L A
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSM-GKLVNA 459
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DL K +G +T +YN ++ A C I A +F++M G+ ++ L+ G
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +++ A +L+E M+ +G P ++Y ++L C++ L++A +L M G D
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579
Query: 306 IVHYNTVVLGFCREGRAI-----------------------------------DACKVLE 330
+V Y T++ G C+ GR DA +
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFR 639
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+M G P+ ++Y+ + GLC G A ++ M++KGF P FS L +G N+
Sbjct: 640 EMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 699
Query: 390 GKVDEACGVLEELLKAGEAPHED 412
G D +E +++ + D
Sbjct: 700 GMDDYLISAIELIIEKAKFRESD 722
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
SN TY ++ + DIL T+ + + + + LI ++ ALK
Sbjct: 544 SNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLL 603
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R M +P PK N +++ L RN LR A LF+ + G P+ +Y I+ R C
Sbjct: 604 RGMRIKGIRPTPKAYNPVIQSLF-RRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCR 662
Query: 214 NGD-ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
G I A+ +M +G MP+ S+R+L +GL + + +E ++ K
Sbjct: 663 GGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKA 716
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 193/394 (48%), Gaps = 19/394 (4%)
Query: 77 LAKEIFDYASR---QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
LA+E+F R +PN TY LI L RA ++I +S P
Sbjct: 141 LAREVFQEMKRNGCKPN----PITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-FDLFKSA 192
T ++ +++ D ALK M + +P + ++ H R F + A
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G L +Y + A C G + A ++ + GV+PDV +Y +L+ R Q
Sbjct: 257 RKGGSL-EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ +++LLEDM G PD ++Y+TL+N LC+++K ++A++LL M+ G P++V YN+V
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G+ + +V E M + C P++V+Y ++ GL GM D A K +L+ S
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLE--ELLKAGEAPHEDTWVMIVPQICAGEEME-- 428
P + +I C GK++EACG+ E+ AG+ +V +C E +
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICR-ALAGLVAALCDAERTDSA 494
Query: 429 -KLGEVLNEIV-KVEIKGDTRIVEAGIGLEDYLI 460
++ EV +E ++ GDT +V+ +ED+L+
Sbjct: 495 RRIVEVASERGHRMTKSGDTDLVKI---VEDHLL 525
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
RS++E K + Q +L + R+ LF GV+ +Y +++ C
Sbjct: 8 RSVVEAGVK-VDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCG 66
Query: 214 NGDISIAYTLFNKMFERGV-MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A L ++ GV P + Y ++ GLCR S+V A +LE M+ + VP+
Sbjct: 67 AGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT LLN LCR K + A ++ MK GC P+ + Y T++ R G +A +V+ +
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ 184
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S ++++ T+VGGLC D A K+M+ M G P+ L+ GF G++
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL 244
Query: 393 DEACGVLEE 401
D EE
Sbjct: 245 DRVIRFFEE 253
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L +S + GV +++++ ++ S LF + RGV+ +Y++++ GLC
Sbjct: 6 LERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLC 65
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
N+A++L+ + L+ + P Y ++ LCR ++ +AYK+L +M + P++
Sbjct: 66 GAGMANQALELVRE-LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G CR + A +V ++M NGC PN ++Y TL+ L G D A + M
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ 184
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S ++ G C ++D+A +EE+ + G P+E T+ +V
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L + E GV D +++ +L L R+S+ + V L + ++G V +Y +++
Sbjct: 3 AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 280 SLCRKKKLREAYKLLCRMKVKGC-NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
LC +A +L+ ++ G P + YN ++ G CR R +DA KVLE M +
Sbjct: 63 GLCGAGMANQALELV--RELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+ +Y L+ GLC +A++ Q M G P+ LI+ G++DEA V
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
Query: 399 LEELLKAGEAPHED-TWVMIVPQICAG----------EEMEKLGEVLNEI 437
+ E ++ E P + T IV +C EEM ++G NE+
Sbjct: 181 MIE-QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEV 229
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 255 AVDLLE-DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A LLE ++ G D+ ++T L L R+ K E +L + +G Y VV
Sbjct: 2 AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C G A A +++ ++ S P L Y ++ GLC A K ++ M+ +
Sbjct: 62 DGLCGAGMANQALELVREL-SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ L+ G C K A V +E+ + G P+ T+ ++ + E+++ V
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
Query: 434 LNEIVKVEIKGD 445
+ E +E+ D
Sbjct: 181 MIEQRSLELPTD 192
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 148/302 (49%), Gaps = 18/302 (5%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L K+ E+ PD TF +++ CK RILE A + K
Sbjct: 253 LTKMVRENVDPDDY--TFNILIDALCKE-----GRILE-----------AQGVLAMMSKR 294
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +YN +M +C ++ A LFN+M +RG+ PDV +Y +L+ G C+ V+ A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L +++ NK VP SY +L++ LC ++ KLL M PD+V YN ++
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+EGR ++A VL M G PN+V+Y ++ G C + +VAK M+ G P
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+C VDEA + +E+ P ++ ++ +C + + E+L+
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534
Query: 436 EI 437
E+
Sbjct: 535 EM 536
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ F M+ P +++L +V +Y A LF G+ P+ ++ I
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHY-PTAISLFTQLQSKGISPSIATFTI 95
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + + A++L + + G P++ ++ ++ G C + +A+D +++L +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ D +Y TL+N L + +++ A LL M+ P++V Y+ ++ G C++G DA
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + G L + V+Y +L+ G C G + + + M+ + P + LI
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G++ EA GVL + K GE P T+ ++ C+ E + + E+ N +VK ++ D
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ A L + G+L + +YN ++ C G L KM V PD ++
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LC++ ++ A +L M +G PD ++Y L+ C ++ + EA +L RM +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+++YN ++ G+C+ +A + +++ + +P + SY +L+ GLC+ G
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
KK + M P + LI C G++ EA GVL ++K G P+ T+ ++
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGD 445
C + ++ N +VK ++ D
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPD 474
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 154/331 (46%), Gaps = 25/331 (7%)
Query: 108 AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
A Y SLID + + + H L +++ + PD + T+ +++ CK
Sbjct: 371 ASYNSLIDGLCNSGRISHVK------KLLDEMHGSAQPPD--VVTYNILIDALCKE---- 418
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
RILE A + K GV PN +YN MM +C ++++A +FN+M
Sbjct: 419 -GRILE-----------ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ G+ PD+ +Y +L+ G C+ V+ A+ L ++M +K +PD SY +L++ LC ++
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+LL M G +PD++ YN ++ FC+ + D L G P+ + +
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKT-QPFDKAISLFRQIVEGIWPDFYTNHAI 585
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V LC +A+ ++ ++ G SP+ LI C G EA +L ++
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P T+ +I+ + E +K ++ E++
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 147/312 (47%), Gaps = 3/312 (0%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++PS+ FT LI Y + A ++L+ +P N I+ + + A
Sbjct: 86 ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFK-A 144
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D ++ G L + +Y ++ NG I A L +M + V P++ Y L+ G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A+ L + +G + D ++Y +L++ C + +E +LL +M + +PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+N ++ C+EGR ++A VL M G P++V+Y L+ G C + A++
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G P + LI G+C VDEA + +EL P ++ ++ +C
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 426 EMEKLGEVLNEI 437
+ + ++L+E+
Sbjct: 385 RISHVKKLLDEM 396
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 39/313 (12%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
++Y LI L + S + +L + P P + TY LI + AL
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP--PDVVTYNILIDALCKEGRILEALGVL 428
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ KP N +++ RN + A D+F K G+ P+ +YN+++ +C
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCL-RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A LF +M + ++PD+ SY L+ GLC ++ +LL++M + G PD ++
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVIT 547
Query: 274 YTTLLNS----------------------------------LCRKKKLREAYKLLCRMKV 299
Y LL++ LC+ +KL+ A L + +
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLM 607
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC+P++ Y ++ C++G +A +L M N P+ +++ ++G L + D
Sbjct: 608 HGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDK 667
Query: 360 AKKYMQLMISKGF 372
A+K + MI++G
Sbjct: 668 AEKLREEMIARGL 680
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%)
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A T FN+M P + L+ + R A+ L + +KG P ++T
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L+N + A+ LL + G P++V +NT++ GFC G A +++ +
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G L + +Y TL+ GL G A +Q M P+ + ALI G C G V +A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G+ ++ + G T+ ++ C+ +++ ++L ++V+ + D
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P + TY L+ + ++ D+A+ FR ++E P + I++ L L+ A
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK-LKMAE 599
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
D K HG PN ++Y I++ A C +G A L +KM + PD ++ I++ L
Sbjct: 600 DALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVL 659
Query: 247 CRKSQVNRAVDLLEDMLNKGFV 268
++++ ++A L E+M+ +G V
Sbjct: 660 LQRNETDKAEKLREEMIARGLV 681
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 136/241 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV DV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ S+++ A +L ++ML+ G VP+ +++TTL++ C+ +++ A ++ +M +
Sbjct: 212 LINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 C 422
C
Sbjct: 392 C 392
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 155/323 (47%), Gaps = 1/323 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 93 KEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEI 152
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
A F ++ +++ +P N ++ + + L F L + GV + +Y++
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQSDVYTYSV 211
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 212 LINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQS 271
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I F
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 387 CNVGKVDEACGVLEELLKAGEAP 409
C G V +L+E+ + G P
Sbjct: 392 CEKGDVWTGLKLLKEMQRDGYMP 414
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 147/312 (47%), Gaps = 1/312 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R + E + ++LE L+ + Y + + ++
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 126
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + G + +NI+M +F G+I +A ++F+ + + + P V S+ LM G +
Sbjct: 127 SLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD 186
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G D +Y+ L+N LC+ K+ +A +L M G P+ V + T
Sbjct: 187 LDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTT 246
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ R A ++ + M S P+L++Y TL+ GLC +G A+ + M KG
Sbjct: 247 LIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + ++K + + ++ +C
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 432 EVLNEIVKVEIK 443
++L E++ V +K
Sbjct: 367 KMLREMLSVGLK 378
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 109/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G D+ Y+ ++ G C+ + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C DVA + + M+S+ SP + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V ++TY LI +++ D A + F ML+ P +++ +R + A
Sbjct: 202 VQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRR-VDVA 260
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++K + P+ +YN ++ C GD+ A L ++M +G+ PD +Y L+ G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A + + M+ + D ++YT L++ LC++ + +A K+L M G P+
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
I Y ++ FC +G K+L++M +G +P++V+
Sbjct: 381 IGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRILMQ-------GLCRK--------SQVNRAVDLL 259
DI + L E G + D +E YR++ + CRK
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G ++ +Y L+ GLC D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C +VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 36/313 (11%)
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN ++ L R + F L K GV + +YN ++ A+C G + A+ L N
Sbjct: 260 LNIMVNALCKDRKFENVMFFLSDMEGK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
RG+ P + +Y ++ GLC+ + +RA D+L +ML G P+ +Y TLL +CR+ +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 288 REAYKLLCRMKVKGCNPDIVH-----------------------------------YNTV 312
EA ++ M +G PD+V Y +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFCR G DA K+ ++M + GC ++V+Y T + GLC + MF A M+ +G
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P F LI+G+C G +D+A + E +++ P + T+ ++ C EM + E
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558
Query: 433 VLNEIVKVEIKGD 445
+ +++++ +I D
Sbjct: 559 LWDDMIRKDIIPD 571
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 154/319 (48%), Gaps = 3/319 (0%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY +Y + DRA ML+ P N +L + + R+ + A +
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL-VEICRRDNILEAQE 383
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F + GVLP+ S++ ++ NG + A F +M G++PD Y IL+ G C
Sbjct: 384 IFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFC 443
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A+ + ++ML +G D ++Y T LN LC+KK +A L M +G PD
Sbjct: 444 RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ T++ G+C++G A + E M P+ V+Y TL+ G C G AK+ M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I K P ++ GFC+ G + EA + +++L+ G P+ T ++ C +M
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623
Query: 428 EKLGEVLNEIVKVEIKGDT 446
K E L++++ I D+
Sbjct: 624 PKAYEYLSKMISNGIIPDS 642
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 183/384 (47%), Gaps = 12/384 (3%)
Query: 69 IASQSDPLLAKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
I + + L A+EIFD SR+ P+ +S +L A+ L ++ + E
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL------ARNGHLYQALMHFREMER 425
Query: 126 YPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ P ++T LI + + ALK ML C N L L + +
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF-A 484
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF + G++P+ ++ ++R +C +G++ A LF M + PD +Y L+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ ++ RA +L +DM+ K +PD +SY T+LN C L EA L +M KG
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V NT++ G+CR G A + L M SNG +P+ SY TL+ G + + A
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M +G + + ++ GFC GK+ EA VL ++++ G P T+ ++ +
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTR 447
+ M++ +E+++ + D R
Sbjct: 725 QDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 166/346 (47%), Gaps = 7/346 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY---LIKIYAESNLPDRALKTF 153
TY ++ L + + D+LI + +TP+ TY L++I N+ + A + F
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEML--QLGLTPNAATYNTLLVEICRRDNILE-AQEIF 385
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P + ++ +L + +L A F+ + G++P+ Y I++ FC
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARN-GHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG +S A + ++M RG DV +Y + GLC+K A L +M+ +G VPD +
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+TTL+ C+ + +A L M PD V YNT++ GFC+ G A ++ +DM
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+P+ +SY T++ G C G+ A M+ KG P+ + LIKG+C G +
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+A L +++ G P ++ ++ +EK ++NE+ K
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 18/368 (4%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-----------------HYPVTPS 131
PNF+HS+ + ++ L R + S ++ + + ++
Sbjct: 129 PNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGL 188
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ L++ Y ++ + F+ + N++L LV ++ A++++
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLV-RTGWVDLAWEIYGE 247
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ N + NIM+ A C + + M +GV D+ +Y L+ CR+
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V A LL ++G P L+Y +L LC+ K A +L M G P+ YNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++ CR ++A ++ ++M G LP+LVS+ +L+G L G A + + M G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + LI GFC G + +A + +E+L G T+ + +C +
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 432 EVLNEIVK 439
+ NE+V+
Sbjct: 488 MLFNEMVE 495
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDT--LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ RKS V+R V ++E +++ F + L Y L+ + + KKLRE + ++ KG +
Sbjct: 161 MVRKSGVSR-VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVS 219
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
I N ++ G R G A ++ ++ G N+ + +V LC F+ +
Sbjct: 220 VSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M KG + LI +C G V+EA +L G P T+ I+ +C
Sbjct: 280 LSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCK 339
Query: 424 GEEMEKLGEVLNEIVKV 440
+ ++ +VL E++++
Sbjct: 340 IGKYDRAKDVLIEMLQL 356
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K + P+ S+N +M + GD+ + L N M GV PDV +Y +
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ +++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 152 IRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGD-LDEGFRLKNAMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
D ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +L+E+ + G P
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM ++ ++ A + + + P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ S + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +G++PN ++ ++ C NG + +A ++ +M + + D+ +Y
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------ 277
L+ GLC+K + +A DL+++M KG PD ++YTTL
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 278 -----------LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ LC++ + +A K+L M G P+I Y ++ FC++G
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 327 KVLEDMPSNGCLPNLVS 343
K+L++M +G +P++V+
Sbjct: 402 KLLKEMQRDGYMPSVVT 418
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G + D +E YR+ +++ L +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S ++ ++R A + + P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A + M+ G P+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L + T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 164/335 (48%), Gaps = 3/335 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA + F + Q NFRH+ + Y +L+ + + ++ + + YP T F L
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L ++ F FN +P N IL L+ + Y + +++ + G
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDW-VYEQMLEDG 252
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P+ +YNI+M A G Y L ++M + G PD+ +Y IL+ L ++ A+
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLG 315
+LL M G P + +TTL++ L R KL EA K VK GC PD+V Y ++ G
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ G A ++ ++M G LPN+ +Y +++ G C G F A ++ M S+G +P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
F V L+ N GKV EA V++++++ G H
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 7/287 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFD--YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ C LI + + LA+++ + S+ N+R +Y ++ L K + LID +
Sbjct: 186 TACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY 245
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + + TP + TY I ++A L DR + M++ P N +L L
Sbjct: 246 EQMLEDGF--TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
T L A +L + GV P + ++ G + ++ + G PDV
Sbjct: 304 TGNKPL-AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 362
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +++ G ++ +A ++ ++M KG +P+ +Y +++ C K +EA LL
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 422
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
M+ +GCNP+ V Y+T+V G+ ++A +V++DM G +L+S
Sbjct: 423 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 182/377 (48%), Gaps = 1/377 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V +++ Q+DP++ + F +A +Q ++H+ ++Y L R+ F D +
Sbjct: 118 TPVLVAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPEL 177
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + P + F LI+++ ++N R + M +F KP NRI++ LV
Sbjct: 178 MNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVK-TG 236
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A +++ + G++ + +Y I+++ C G I L ++M PDV +Y
Sbjct: 237 HLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYT 296
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+++ L + ++ + + E+M PD ++YTTL+ +LC ++ E ++L MK K
Sbjct: 297 AMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQK 356
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
D Y +++ GF R AC +L+D+ +G +L Y +L+ G+C+ D A
Sbjct: 357 KYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKA 416
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K Q+ + + P+F ++ + + ++D+ C +L ++ K G +D
Sbjct: 417 YKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVM 476
Query: 421 ICAGEEMEKLGEVLNEI 437
I GE ++ EV +
Sbjct: 477 IEKGERLKLALEVFEHL 493
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A LF P++ +Y+ + F GD+ A +NK+ E +P V +YR
Sbjct: 517 VKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRS 576
Query: 242 LMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++GLC+ +++ A+ L+ D L N P YT + C+ + +L M +
Sbjct: 577 LVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQE 636
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
GC PD V Y+ ++ G C+ G +A KV +M
Sbjct: 637 GCTPDEVTYSALISGMCKHGTLEEARKVFSNM 668
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 48/384 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITL-KSEHYPVTPSLFTY--LIKI-YAESNLPDRALKT 152
TY+IL+ L +A ID++L L + P +F Y ++K+ AE NL D L+
Sbjct: 259 TYMILVKGLCKA---GRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNL-DGCLRV 314
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ M + +P ++ L + N + F+LFK + L + Y ++ F
Sbjct: 315 WEEMRKDKVEPDVMAYTTLVAAL-CNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFV 373
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
N + A L + + G D+ Y L++G+C QV++A L + +++ P+ L
Sbjct: 374 VNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFL 433
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRM----------------------------------- 297
+ +L S K++ + LL +M
Sbjct: 434 TVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHL 493
Query: 298 KVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
K KG C+ I YN ++ R G A + +D+ + P+ +Y + + G
Sbjct: 494 KAKGYCSISI--YNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGD 551
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE-LLKAGEAPHEDTWV 415
A +I P + +L+KG C ++D A ++ + L P E +
Sbjct: 552 VQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYT 611
Query: 416 MIVPQICAGEEMEKLGEVLNEIVK 439
+ + C EK+ +VLNE+++
Sbjct: 612 LTILHACKSGNAEKVIDVLNEMMQ 635
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P+ L++ +++ L+ A ++F+ G + YNI+M A G++ A +
Sbjct: 464 PVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGYC-SISIYNILMEAIHRTGEVKKALS 522
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
LF+ + + PD +Y + V A ++ +P +Y +L+ LC
Sbjct: 523 LFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLC 582
Query: 283 RKKKLREAYKLL--CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
+ +++ A L+ C V P Y +L C+ G A VL +M GC P+
Sbjct: 583 KSEEIDAAIMLVRDCLANVTS-GPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPD 641
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLM 367
V+Y L+ G+C G + A+K M
Sbjct: 642 EVTYSALISGMCKHGTLEEARKVFSNM 668
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 37/322 (11%)
Query: 105 LGRAKYFSLID------------DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
+ RA Y SLI+ D+L L Y +++ LI+ D+A K
Sbjct: 360 IDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKL 419
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLR--PAFDLFKSAHKHG--VLPN-TKSYNIM 207
F+ + + +P + +LV++ R L K G V+ + +K +++M
Sbjct: 420 FQVTVHESLEP---NFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVM 476
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ + +A +F + +G + Y ILM+ + R +V +A+ L +D+ + F
Sbjct: 477 IEK---GERLKLALEVFEHLKAKGYC-SISIYNILMEAIHRTGEVKKALSLFDDIKDSNF 532
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAIDAC 326
PD+ +Y+ + ++EA ++ ++ C P + Y ++V G C+ IDA
Sbjct: 533 KPDSSTYSNAIICFVEVGDVQEACACYNKI-IEMCQLPSVAAYRSLVKGLCK-SEEIDAA 590
Query: 327 KVLEDMPSNGCLPNLVS------YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+L CL N+ S Y + C G + + M+ +G +P
Sbjct: 591 IML----VRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYS 646
Query: 381 ALIKGFCNVGKVDEACGVLEEL 402
ALI G C G ++EA V +
Sbjct: 647 ALISGMCKHGTLEEARKVFSNM 668
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG+ + SY L R + R A ++ M ++G P + ++ R +
Sbjct: 146 KGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANRGLR 205
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
V E M G P + Y ++ GL G D+A + G L+K
Sbjct: 206 VYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVK 265
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G++DE +L+ + P + +V + A ++ V E+ K +++
Sbjct: 266 GLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEP 325
Query: 445 DT 446
D
Sbjct: 326 DV 327
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 169/353 (47%), Gaps = 8/353 (2%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V ++ SQSD +A + F ++ RQ +RH Y +++ L + K +L +
Sbjct: 50 PRLVCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLM 109
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
TP F ++ Y+ + A++ M + +P N + +LV N
Sbjct: 110 VRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMA-NM 168
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G++PN +YN +++ +C + A L ++M +G PD SY
Sbjct: 169 LEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYT 228
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M LC+ ++ +D++E M + + D ++Y TL++ LC+ + EA + L + +G
Sbjct: 229 VMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRG 288
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y+ +V +C+EGR A +++ +M + GC+P++V+Y ++ G G A+
Sbjct: 289 FQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQAR 348
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
K +Q M G P+ A +KG C G EA E++KA E E W
Sbjct: 349 KMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEA----REMMKASE---EQWW 394
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 138/271 (50%), Gaps = 1/271 (0%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ +L H+ + A + A K G + Y+ ++ ++C G + A + N+MF
Sbjct: 262 NTLIHMLCKHQ-HADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMF 320
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
RG +PDV +Y ++ G + +V +A +L+ M G P+T+SYT L LC+K
Sbjct: 321 TRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSS 380
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA +++ + + P+ + Y+ V+ GF REG+ DAC V+ +M G P V L+
Sbjct: 381 EAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLL 440
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
LC G D AKK+M+ ++ G + + +I FC ++ A +L+++ + +
Sbjct: 441 QSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKH 500
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P T+ I+ + +E+ E+ +++K
Sbjct: 501 PDAVTYTTIIDALGKKGRIEEATELTLKMLK 531
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 172/383 (44%), Gaps = 7/383 (1%)
Query: 79 KEIFDYASRQPNFR--HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+E+ D + + + TY LI L + ++ L + + V ++ +
Sbjct: 240 REVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAI 299
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ Y + D+A + M C P I+ + + A + + +KHG
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGF-SQAGEVGQARKMLQQMYKHG 358
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
PNT SY ++ C G+ S A + E+ P+ +Y ++M G R+ +++ A
Sbjct: 359 CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
D++ +M+ KGF P + LL SLCR ++ EA K + GC + V++ TV+ F
Sbjct: 419 DVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRF 478
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C++ A +L+DM + P+ V+Y T++ L +G + A + M+ KG P
Sbjct: 479 CQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTP 538
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+I + +G+V++ +L+++L E + ++ ++C +E ++L +
Sbjct: 539 VTYRTVIHRYGQIGRVEDLLNLLDKMLTRQEC--RTAFNQVIEKLCTFGNLEAADKLLGK 596
Query: 437 IVKVEIKGDTRIVEAGIGLEDYL 459
+++ + D + +E YL
Sbjct: 597 VLRTASRIDANTCH--VLMESYL 617
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 119/251 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ + + +M ++ G + A + M + G+ P++ + L + + +A
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ LE M G +P+ ++Y L+ C ++ +A +L+ M +KGC+PD V Y TV+
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ R + V+E M L + V+Y TL+ LC D A ++++ +GF
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
A++ +C G++D+A ++ E+ G P T+ I+ E+ + ++L
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352
Query: 436 EIVKVEIKGDT 446
++ K K +T
Sbjct: 353 QMYKHGCKPNT 363
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ ++ S R KLR A ++L M+ G P+++ NT + A + LE M
Sbjct: 120 DFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERM 179
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF-CNVGK 391
G +PN+V+Y L+ G CD + A + + M KG SP VS+ + GF C +
Sbjct: 180 QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPD-KVSYYTVMGFLCKNRR 238
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNEIVKVEIKGDTR 447
+ E V+E++ + T+ ++ +C A E ++ L E +V+ G +
Sbjct: 239 IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA 298
Query: 448 IVEA 451
IV++
Sbjct: 299 IVDS 302
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + Y +L+ L + K + A ++L M +G + V++ + R G+ +A +VL
Sbjct: 82 DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M G PNL+ T + L M + A ++++ M G P+ + LIKG+C++
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
+V++A ++ E+ G +P + ++ ++ +C ++ EV++ I K+E DT+++
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKN---RRIREVMDVIEKME---DTKLL 255
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 110/295 (37%), Gaps = 38/295 (12%)
Query: 123 SEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
SE TP+ TY + ++ E L D A R M+ P P ++N +L+ L
Sbjct: 389 SEEQWWTPNAITYSVVMHGFRREGKLSD-ACDVVREMIGKGFFPTPVEINLLLQSLC-RI 446
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A + G N ++ ++ FC DI A +L + M+ PD +Y
Sbjct: 447 GRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTY 506
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN-------------------- 279
++ L +K ++ A +L ML KG P ++Y T+++
Sbjct: 507 TTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLT 566
Query: 280 -------------SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
LC L A KLL ++ D + ++ + R+G + A
Sbjct: 567 RQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAY 626
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
KV M S +P+L + L +G + A + +G + H+
Sbjct: 627 KVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISSHCLRHS 681
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 164/335 (48%), Gaps = 3/335 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA + F + Q NFRH+ + Y +L+ + + ++ + + YP T F L
Sbjct: 211 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 270
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L ++ F FN +P N IL L+ + Y + +++ + G
Sbjct: 271 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDW-VYEQMLEDG 329
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P+ +YNI+M A G Y L ++M + G PD+ +Y IL+ L ++ A+
Sbjct: 330 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 389
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLG 315
+LL M G P + +TTL++ L R KL EA K VK GC PD+V Y ++ G
Sbjct: 390 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITG 448
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ G A ++ ++M G LPN+ +Y +++ G C G F A ++ M S+G +P+
Sbjct: 449 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 508
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
F V L+ N GKV EA V++++++ G H
Sbjct: 509 FVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 7/287 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFD--YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ C LI + + LA+++ + S+ N+R +Y ++ L K + LID +
Sbjct: 263 TACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY 322
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + + TP + TY I ++A L DR + M++ P N +L L
Sbjct: 323 EQMLEDGF--TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 380
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
T L A +L + GV P + ++ G + ++ + G PDV
Sbjct: 381 TGNKPL-AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 439
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +++ G ++ +A ++ ++M KG +P+ +Y +++ C K +EA LL
Sbjct: 440 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 499
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
M+ +GCNP+ V Y+T+V G+ ++A +V++DM G +L+S
Sbjct: 500 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 546
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 36/313 (11%)
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN ++ L R + F L K GV + +YN ++ A+C G + A+ L N
Sbjct: 260 LNIMVNALCKDRKFENVMFFLSDMEGK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
RG+ P + +Y ++ GLC+ + +RA D+L +ML G P+ +Y TLL +CR+ +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 288 REAYKLLCRMKVKGCNPDIVH-----------------------------------YNTV 312
EA ++ M +G PD+V Y +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFCR G DA K+ ++M + GC ++V+Y T + GLC + MF A M+ +G
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P F LI+G+C G +D+A + E +++ P + T+ ++ C EM + E
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558
Query: 433 VLNEIVKVEIKGD 445
+ +++++ +I D
Sbjct: 559 LWDDMIRKDIIPD 571
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 154/319 (48%), Gaps = 3/319 (0%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY +Y + DRA ML+ P N +L + + R+ + A +
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL-VEICRRDNILEAQE 383
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F + GVLP+ S++ ++ NG + A F +M G++PD Y IL+ G C
Sbjct: 384 IFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFC 443
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A+ + ++ML +G D ++Y T LN LC+KK +A L M +G PD
Sbjct: 444 RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ T++ G+C++G A + E M P+ V+Y TL+ G C G AK+ M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I K P ++ GFC+ G + EA + +++L+ G P+ T ++ C +M
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623
Query: 428 EKLGEVLNEIVKVEIKGDT 446
K E L++++ I D+
Sbjct: 624 PKAYEYLSKMISNGIIPDS 642
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 183/384 (47%), Gaps = 12/384 (3%)
Query: 69 IASQSDPLLAKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
I + + L A+EIFD SR+ P+ +S +L A+ L ++ + E
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL------ARNGHLYQALMHFREMER 425
Query: 126 YPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ P ++T LI + + ALK ML C N L L + +
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF-A 484
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF + G++P+ ++ ++R +C +G++ A LF M + PD +Y L+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ ++ RA +L +DM+ K +PD +SY T+LN C L EA L +M KG
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V NT++ G+CR G A + L M SNG +P+ SY TL+ G + + A
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M +G + + ++ GFC GK+ EA VL ++++ G P T+ ++ +
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTR 447
+ M++ +E+++ + D R
Sbjct: 725 QDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 166/346 (47%), Gaps = 7/346 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY---LIKIYAESNLPDRALKTF 153
TY ++ L + + D+LI + +TP+ TY L++I N+ + A + F
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEML--QLGLTPNAATYNTLLVEICRRDNILE-AQEIF 385
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P + ++ +L + +L A F+ + G++P+ Y I++ FC
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARN-GHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG +S A + ++M RG DV +Y + GLC+K A L +M+ +G VPD +
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+TTL+ C+ + +A L M PD V YNT++ GFC+ G A ++ +DM
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+P+ +SY T++ G C G+ A M+ KG P+ + LIKG+C G +
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+A L +++ G P ++ ++ +EK ++NE+ K
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 159/368 (43%), Gaps = 18/368 (4%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-----------------HYPVTPS 131
PNF+HS+ + ++ L R + S ++ + + ++
Sbjct: 129 PNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGL 188
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ L++ Y ++ + F+ + N++L LV ++ A++++
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLV-RTGWVDLAWEIYGE 247
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ N + NIM+ A C + + M +GV D+ +Y L+ CR+
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V A LL ++G P L+Y +L LC+ K A +L M G P+ YNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++ CR ++A ++ ++M G LP+LVS+ +L+G L G A + + M G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + LI GFC G + +A + +E+L G T+ + +C +
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487
Query: 432 EVLNEIVK 439
+ NE+V+
Sbjct: 488 MLFNEMVE 495
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDT--LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ RKS V+R V ++E +++ F + L Y L+ + + KKLRE + ++ KG +
Sbjct: 161 MVRKSGVSR-VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVS 219
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
I N ++ G R G A ++ ++ G N+ + +V LC F+ +
Sbjct: 220 VSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M KG + LI +C G V+EA +L G P T+ I+ +C
Sbjct: 280 LSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCK 339
Query: 424 GEEMEKLGEVLNEIVKV 440
+ ++ +VL E++++
Sbjct: 340 IGKYDRAKDVLIEMLQL 356
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 37/379 (9%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
V ++ S + A + F + R F H+ T+L +I LGRA + IL+ + +
Sbjct: 15 VYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK 74
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
L+ +I Y ++ + ++K F+ M E
Sbjct: 75 GLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEEL------------------------- 109
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
GV KSY+ + + G +A FNKM G+ P ++ ++M
Sbjct: 110 -----------GVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMW 158
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G +V A EDM ++ +PD ++Y T++N CR KK+ EA K MK + P
Sbjct: 159 GFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEP 218
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y T++ G+ R DA + +E+M G PN ++Y TL+ GLC+ A+ +
Sbjct: 219 TVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSIL 278
Query: 365 QLMISKGFSP-HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ K +P S+ LI G C G +D A VL+ +++ + +++ C
Sbjct: 279 KEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCK 338
Query: 424 GEEMEKLGEVLNEIVKVEI 442
E +K ++L+++++ +I
Sbjct: 339 AGEYDKAIKLLDKVIEKDI 357
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + +F KM E GV ++SY L + + R+ +
Sbjct: 73 KKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A ML++G P ++ ++ K+ A + MK + PD+V YNT+V
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMV 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+CR + +A K +M P +V+Y TL+ G D A ++++ M G
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM-IVPQICAGEEMEKLGE 432
P+ L+ G CN K+ EA +L+E++ AP +++ M ++ C +++
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAAN 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E+Y
Sbjct: 313 VLKAMIRLSVP--TEAGHYGVLIENY 336
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 119/300 (39%), Gaps = 48/300 (16%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ R K + + +K + T +T LIK Y + D AL+ M
Sbjct: 187 TYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEM 246
Query: 157 LEFNCKP--------LPKQLN--------RILELLVTHRNYLRP---------------- 184
F KP LP N IL+ +V Y+ P
Sbjct: 247 KGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVD--KYIAPTDNSIFMRLISGQCKA 304
Query: 185 -----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM------ 233
A ++ K+ + V Y +++ +C G+ A L +K+ E+ ++
Sbjct: 305 GDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQST 364
Query: 234 --PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ +Y L++ LC Q +A L+ ++ G V D + TL+ ++ A+
Sbjct: 365 LHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLG-VQDPTALNTLIRGHSQEGSPDSAF 423
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+LL M + + + Y+++V + ++ DA L+ M NG LP+ +R+++ L
Sbjct: 424 ELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 7/299 (2%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP++ F +I Y+ + L ++A K +R M++F P + ++ + ++ L+ A
Sbjct: 355 ITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLI-MGLSKLWRLQEA 413
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DL G+ N ++ +++ + GD++ AY+L+N+M RG+ PD ++ + G
Sbjct: 414 RDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFING 473
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L V+ A D+ M KGF+P+ Y +L+ C +L+EA L M KG PD
Sbjct: 474 LSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPD 533
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK--KY 363
I N ++ G C+EGR A V +M G +P++V+Y TL+ G C FD +
Sbjct: 534 IFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKA--FDTVSTDEV 591
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M + G+ P + + + G C K+ A +LEEL+ AG P T+ ++ +C
Sbjct: 592 VNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVC 650
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 168/365 (46%), Gaps = 16/365 (4%)
Query: 31 FCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN 90
C++ E+ E E I+ + S +IA+ S L ++ +
Sbjct: 334 LCWAGWLDEAMKFLEDMLEKGITPTVVAFNS------IIAAYSRAGLEEKAYKAYRMMVK 387
Query: 91 FRHSNSTYLILILKLGRAKYFSLID--DILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
F S+ L +G +K + L + D+L + E P+ + FT L+ Y
Sbjct: 388 FGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAG 447
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + M P + + L + + A+D+F K G +PN YN ++
Sbjct: 448 AYSLWNEMEGRGIHPDAVAFSAFINGL-SIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLI 506
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
R FC +G + A L +M +G++PD+ + I++ GLC++ ++ A D+ +M + G +
Sbjct: 507 RGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLI 566
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++Y TL++ C+ +++ +M G +PDI YN + G C + A +
Sbjct: 567 PDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMM 626
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL---MISKGFSPHFSVSHALIKG 385
LE++ S G +P+ V+Y T++ G+C DV ++ M + ++ F P+ ++ L+
Sbjct: 627 LEELISAGVVPDTVTYNTVMNGVCT----DVLERAMIVTAKLLKMAFVPNVVTANLLLSH 682
Query: 386 FCNVG 390
FC G
Sbjct: 683 FCKQG 687
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 162/418 (38%), Gaps = 75/418 (17%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R N + +IL R + + + +L + + + P ++ Y LI Y A
Sbjct: 146 RPCNRNFNAVILGFCRKGHVKVGESLLCVM--QKFKCQPDVYAYNILINAYCTRGQTFDA 203
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
L R M++ C P ++ N + A +LF + G +PN YN +M
Sbjct: 204 LGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME-ARNLFDGMKEAGHIPNVVCYNTLMN 262
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILM-------------------------- 243
+ DI A L+ +M + V PD ++ IL+
Sbjct: 263 GYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLS 322
Query: 244 ---------QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY-------------------- 274
GLC ++ A+ LEDML KG P +++
Sbjct: 323 ISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAY 382
Query: 275 ---------------TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++L+ L + +L+EA LL M V+G + + ++ G+ R
Sbjct: 383 RMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRM 442
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G A + +M G P+ V++ + GL G+ D A M KGF P+ V
Sbjct: 443 GDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVY 502
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++LI+GFCN G++ EA + E+ + G P T +I+ +C M+ +V +
Sbjct: 503 NSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNM 560
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 169/402 (42%), Gaps = 18/402 (4%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY-FS 112
+S + S C ++ +Q+ LA+++ + R+ S + + + FS
Sbjct: 21 DSDEMVKSSCVAAHVLGAQNLKFLAQDVVSWVIRRVGVDRSREVVEFMWKRHAEFESDFS 80
Query: 113 LIDDIL-----ITLKSEHYPV-----------TPSLFTYLIKIYAESNLPDRALKTFRSM 156
++D ++ + + E + + S T L K+ K R M
Sbjct: 81 VLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGM 140
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +P + N ++ L + +++ L K P+ +YNI++ A+C G
Sbjct: 141 IHQGPRPCNRNFNAVI-LGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A M + G P + ++ ++ C + + A +L + M G +P+ + Y T
Sbjct: 200 TFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNT 259
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N + + + +A L MK K PD +N +V G R GR D ++L D+ +G
Sbjct: 260 LMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSG 319
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
L Y V GLC G D A K+++ M+ KG +P +++I + G ++A
Sbjct: 320 SLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAY 379
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++K G P T ++ + +++ ++L E++
Sbjct: 380 KAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMI 421
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+K MLE P N I+ + A+ ++ K G+ P++ + +
Sbjct: 341 DEAMKFLEDMLEKGITPTVVAFNSIIAAY-SRAGLEEKAYKAYRMMVKFGLFPSSLTCSS 399
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + A L +M G+ + ++ +L+ G R V A L +M +G
Sbjct: 400 LIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRG 459
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++++ +N L + EAY + +M KG P+ YN+++ GFC GR +A
Sbjct: 460 IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEAL 519
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ +M G LP++ + ++ GLC +G A + M G P + LI G+
Sbjct: 520 MLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGY 579
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C V+ ++ G P T+ + + +C G +M + +L E++ + DT
Sbjct: 580 CKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDT 639
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 2/287 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A + + G+ P ++N ++ A+ G AY + M + G+ P +
Sbjct: 339 WLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCS 398
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GL + ++ A DLL +M+ +G + ++T LL+ R + AY L M+ +
Sbjct: 399 SLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGR 458
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +PD V ++ + G G +A V M G +PN Y +L+ G C+ G A
Sbjct: 459 GIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEA 518
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M KG P ++ +I G C G++ A V + G P T+ ++
Sbjct: 519 LMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDG 578
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRP 467
C + EV+N++ D I I L G+ SR
Sbjct: 579 YCKAFDTVSTDEVVNKMYAT--GWDPDITTYNIRLHGLCTGRKMSRA 623
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNY--LRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
R M E C+ N +L+ L R R + P+ SYNI++
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
F G + AY+LF E GV PDV +Y ++ GLC+ +V+RA D+ + M+ KG P+
Sbjct: 203 FFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPN 259
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID-ACKVL 329
++Y T+++ LC+ +++ A + +M KG P V YNT++ G C+ +A+D A V
Sbjct: 260 NVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK-AQAVDRAEGVF 318
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ M G P+ V+Y T++ GLC D A+ Q MI KG P +I G C
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
VD A GV ++++ G P+ T+ ++ + + E++ + + E+ +++ D +
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD--VF 436
Query: 450 EAGIGLEDYLIGKTRSRPRRT 470
G+ L DYL + R+
Sbjct: 437 TYGL-LLDYLCKNGKCNEARS 456
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 3/295 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + P +FTY L+ ++ + A F SM+ KP + I+ + L
Sbjct: 429 HDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP-SVTIYGIMLHGYGKKGALS 487
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
DL +G+ PN + +N ++ A+ I +F KM ++G+ P+V +Y L+
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV M+N+G P+ + + +L+ LC K + +L M +G
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDIV +NTV+ C+EGR ++A ++++ M G P+++SY TL+ G C D A K
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ M+S G P+ + L+ G+C G++D A + E+L+ G P +T+ I+
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 166/368 (45%), Gaps = 37/368 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+ +FD R+ + S + Y I++ G+ S + D+L + + +F +I
Sbjct: 454 ARSLFDSMIRK-GIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
YA+ + D + F M + G+
Sbjct: 513 CAYAKRAMIDEVMHIFIKM------------------------------------KQQGL 536
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN +Y ++ A C G + A FN+M GV P+ + L+ GLC + + +
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L +MLN+G PD + + T+L +LC++ ++ EA +L+ M G PD++ YNT++ G C
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHC 656
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R +A K+L+ M S G PN+VSY TL+ G C G D A + M+ KG +P
Sbjct: 657 FASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ ++ G G+ EA + ++K+ + T+ +I+ C ++ ++ +
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSL 776
Query: 438 VKVEIKGD 445
++++ D
Sbjct: 777 CSMDLQLD 784
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 142/275 (51%), Gaps = 7/275 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ LF + GV P+ +YN ++ C ++ A +F +M E+GV P+ +Y ++
Sbjct: 212 AYSLFL---EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIID 268
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +V+ A + + M++KG P ++Y T+++ LC+ + + A + +M +G P
Sbjct: 269 GLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKP 328
Query: 305 DIVHYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V YNT++ G C+ +AID + V + M G P+ ++Y ++ GLC D A+
Sbjct: 329 DHVTYNTIIDGLCK-AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
Q MI KG P+ + LI G+ + G+ +E ++E+ P T+ +++ +C
Sbjct: 388 FQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCK 447
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
+ + + + +++ IK I GI L Y
Sbjct: 448 NGKCNEARSLFDSMIRKGIKPSVTIY--GIMLHGY 480
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 161/354 (45%), Gaps = 5/354 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
+N TY +I L +A+ + + + + + V PS TY +I ++ DRA
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK--GVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
F+ M++ KP N I++ L + + A +F+ GV P+ +Y I++
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQ-AIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A +F +M ++GV P+ +Y L+ G Q V +++M PD
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y LL+ LC+ K EA L M KG P + Y ++ G+ ++G + +L
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M +NG PN + T++ + M D M +G SP+ LI C +G+
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
VD+A +++ G P+ + +V +C ++ EK+ E+ E++ I+ D
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 2/320 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+P + +Y I I N + K + LE P N I++ L + R A D+
Sbjct: 190 SPDVVSYNIVINGFFN-EGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDR-AEDV 247
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F+ + GV PN +YN ++ C ++ +A +F KM ++GV P +Y ++ GLC+
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
V+RA + + M+++G PD ++Y T+++ LC+ + + +A + +M KG PD +
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y ++ G C+ A V + M G PN +Y L+ G G ++ + ++ M
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ P L+ C GK +EA + + +++ G P + +++ +
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487
Query: 429 KLGEVLNEIVKVEIKGDTRI 448
++ ++LN +V I + RI
Sbjct: 488 EMHDLLNLMVANGISPNHRI 507
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 9/254 (3%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y+I++ FC G + + + F + + G D L++GLC +V A+
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 257 D-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG----CNPDIVHYNT 311
LL M G +SY TLL LC +++ EA +LL M V G C+PD+V YN
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELL-HMMVDGQDSSCSPDVVSYNI 198
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
V+ GF EG+ A + +M G P++V+Y T++ GLC D A+ Q M+ KG
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ + +I G C +VD A GV ++++ G P T+ I+ +C + +++
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315
Query: 432 EVLNEIVKVEIKGD 445
V +++ +K D
Sbjct: 316 GVFQQMIDRGVKPD 329
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P TY I I ++ DRA F+ M++ KP N ++ ++ +
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW-EEV 419
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K H + P+ +Y +++ C NG + A +LF+ M +G+ P V Y I++ G
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+K ++ DLL M+ G P+ + T++ + ++ + E + +MK +G +P+
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y T++ C+ GR DA M + G PN V + +LV GLC ++ ++
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+++G P + ++ C G+V EA +++ ++ G P ++ ++ C
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 426 EMEKLGEVLNEIVKVEIK 443
M++ ++L+ +V +K
Sbjct: 660 RMDEAVKLLDGMVSAGLK 677
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 112 SLIDDIL-ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
++ID+++ I +K + ++P++ TY LI + D A+ F M+ P
Sbjct: 519 AMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVF 578
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ L T + + +LF G+ P+ +N ++ C G + A L + M
Sbjct: 579 NSLVYGLCTVDKWEKVE-ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G+ PDV SY L+ G C S+++ AV LL+ M++ G P+ +SY TLL+ C+ ++
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRID 697
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
AY L M KG P + YNT++ G R GR +A ++ +M + L ++ +Y ++
Sbjct: 698 NAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIIL 757
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C FD A K Q + S + +I G G+ ++A + + G
Sbjct: 758 DGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLV 817
Query: 409 PHEDTWVMIVPQICAGEEMEKL 430
P T+ +I + +E+L
Sbjct: 818 PSVVTYRLIAENLIEEGSLEEL 839
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 5/355 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
SN TY +I L +A+ + + + V P TY +I ++ D+A
Sbjct: 294 SNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR--GVKPDHVTYNTIIDGLCKAQAIDKAEG 351
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
F+ M++ KP I++ L ++ R A +F+ GV PN +YN ++ +
Sbjct: 352 VFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDR-AEGVFQQMIDKGVKPNNGTYNCLIHGY 410
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
G +M + PDV +Y +L+ LC+ + N A L + M+ KG P
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
Y +L+ +K L E + LL M G +P+ +NTV+ + + + +
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G PN+V+Y TL+ LC G D A MI++G +P+ V ++L+ G C V K
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ + E+L G P + ++ +C + + +++ +V + +K D
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDV 645
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 6/240 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A L G+ PN SYN ++ +C G I AY LF +M +GV P VE+Y
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL---LCRMK 298
++ GL R + + A +L +M+ + +Y+ +L+ C+ EA+K+ LC M
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMD 780
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++ DI+ +N ++ G + GR DA + +P+NG +P++V+YR + L ++G +
Sbjct: 781 LQ---LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLE 837
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+M G +P+ + +ALI+ + G++ A L +L + + T M++
Sbjct: 838 ELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
K V+R +L D NK PD +Y+ ++ CR +L + + G D +
Sbjct: 63 KLAVSRFNRMLRDCSNK-VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIV 121
Query: 309 YNTVVLGFCREGRAIDACKVL-EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
N ++ G C R +A VL MP GC +VSY TL+ GLCD+ + A++ + +M
Sbjct: 122 VNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMM 181
Query: 368 I---SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ SP + +I GF N G+VD+A + E+ G +P T+ I+ +C
Sbjct: 182 VDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKA 238
Query: 425 EEMEKLGEVLNEIVKVEIK 443
+E+++ +V ++V+ +K
Sbjct: 239 QEVDRAEDVFQQMVEKGVK 257
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L R+ FS ++ + + + ++ ++ + ++N D A K F+S+
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSL 776
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ + N +++ L A DLF + +G++P+ +Y ++ G
Sbjct: 777 CSMDLQLDIITFNIMIDGLFKGGRK-EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS 835
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ LF+ M + G P+ L++ L + ++ RA L + K F + S T+
Sbjct: 836 LEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEA-STTS 894
Query: 277 LLNSLCRKKKLREAYKLL---CR 296
+L SL +++ ++ K L CR
Sbjct: 895 MLISLFSREEYQQHAKSLPEKCR 917
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 126/221 (57%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ PN +YN M+ FC +G S A L +MFER + PDV ++ +L+
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L ++ + A +L +ML +G +P+T++Y ++++ ++ +L A ++ M KGC+P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ ++ ++ G+C R D K+L +M G + N ++Y TL+ G C G + A +
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
Q MIS G P+ + L+ G CN GK+ +A + + + K+
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKS 487
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 49/367 (13%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+LFTY +I + S A + R M E P + ++ LV + A
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE-A 337
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L+ G++PNT +YN M+ F + A +F M +G PDV ++ IL+ G
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG 397
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG---- 301
C +V+ + LL +M +G V +T++YTTL++ C+ L A LL M G
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457
Query: 302 -----------CN-------------------------------PDIVHYNTVVLGFCRE 319
CN PD+ YN ++ G E
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ +A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SKGFSP
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G+C VG+V + V E+ + G + T+ ++ C + ++ E++
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637
Query: 440 VEIKGDT 446
+ DT
Sbjct: 638 SGVYPDT 644
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 129/248 (52%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN Y+ ++ +G + A LF++M E+G+ P++ +Y ++ G C + + A L
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +M + PD ++++ L+N+L ++ K EA +L M +G P+ + YN+++ GF +
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ R A ++ M + GC P+++++ L+ G C D K + M +G +
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI GFC +G ++ A +L+E++ +G P+ T ++ +C +++ E+ +
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485
Query: 439 KVEIKGDT 446
K ++ D
Sbjct: 486 KSKMDLDA 493
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 45/363 (12%)
Query: 116 DILITLKSE----HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L + P FT LIK + + AL TF + + P + +
Sbjct: 93 DVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTL 152
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L L + + A F K PN ++ +M C G + A L ++M E G
Sbjct: 153 LHGLCVE-DRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDG 207
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREA 290
+ P+ +Y ++ G+C+ A++LL M + P+ + Y+ +++ L + + +A
Sbjct: 208 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA 267
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS---------------- 334
L M+ KG +P++ YN ++ GFC GR +A ++L +M
Sbjct: 268 QNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINA 327
Query: 335 -------------------NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
G +PN ++Y +++ G Q D A++ LM +KG SP
Sbjct: 328 LVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPD 387
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI G+C +VD+ +L E+ + G + T+ ++ C + ++L
Sbjct: 388 VITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQ 447
Query: 436 EIV 438
E++
Sbjct: 448 EMI 450
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 121/230 (52%), Gaps = 12/230 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + + + AL + M+ P N +L+ L + L+ A ++FK
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN-GKLKDALEMFKVM 484
Query: 193 HK-----------HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
K + V P+ ++YNI++ G S A L+ +M RG++PD +Y
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC++S+++ A + + M +KGF PD +++TTL+N C+ ++ + ++ C M +G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ + Y T++ GFC+ G A + ++M S+G P+ ++ R ++ GL
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 13/234 (5%)
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ-GLCRKSQVNRAVDLLEDMLNKGF 267
R FC SI +TL K G R+ +Q G ++ A+DL M+
Sbjct: 18 RLFCTR---SIRHTLAKK--SSGKAGGFGGERLKLQSGFHEIKGLDDAIDLFGYMVRSRP 72
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P + + LL + R ++ L +M+++ +I + ++ FC + A
Sbjct: 73 LPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALS 132
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ G P+LV++ TL+ GLC + A + + P+ L+ G C
Sbjct: 133 TFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC----KPNVIAFTTLMNGLC 188
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
G+V EA +L+ +++ G P++ T+ IV +C +M LN + K+E
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRKME 239
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 158 IRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ +++ A +L ++ML KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YN ++ G C++G A ++ +M G P+ ++Y TL+ G C +G B A
Sbjct: 278 LLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ MI + ALI G C G+ +A +L +L G P T+ MI+ +
Sbjct: 338 EHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K ++L E+
Sbjct: 398 CKKGDVWKGSKLLKEM 413
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+R+ F T ++ L + KYF L+ + YP + F L+ + +
Sbjct: 98 TREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGD 157
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L + GV P+ +Y+
Sbjct: 158 IRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGD-LDEGFRLKSAMXASGVQPDVYTYS 216
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 217 VLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+PD ++Y L+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 277 SLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTA 336
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 337 FEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINE 396
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V + +L+E+ + G P
Sbjct: 397 FCKKGDVWKGSKLLKEMQRDGHVP 420
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 108/204 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y
Sbjct: 228 MDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNX 287
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + +A DL+ +M KG PD ++YTTL++ C++ L A++ RM +
Sbjct: 288 LIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEEN 347
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G C+EGR +DA K+L M S G P+ +Y ++ C +G
Sbjct: 348 IRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGS 407
Query: 362 KYMQLMISKGFSPHFSVSHALIKG 385
K ++ M G P + L+ G
Sbjct: 408 KLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L + L+ A DL
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGD-LKQANDLIXEM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C G++ A+ +M E + D +Y L+ GLC++ +
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRX 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L ML+ G PD +YT ++N C+K + + KLL M+ G P +V YN +
Sbjct: 369 VDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Query: 313 VLG 315
+ G
Sbjct: 429 MNG 431
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F S K G+ P+ S+N +M + GD+ + L + M GV PDV ++ +
Sbjct: 152 IRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++MLB G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 212 LINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQS 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 272 LLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 332 EYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 392 CKKGDVWTGSKLLKEM 407
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 1/328 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T +I L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F S+ ++ +P N ++ + + L F L GV P+ +++
Sbjct: 152 IRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGD-LDEGFRLKSVMQASGVQPDVYTHS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ ML++
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+PD ++Y TL+ LC+K L++ L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + +Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDT 413
FC G V +L+E+ + G P+ T
Sbjct: 391 FCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM C++ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ ++ ++ G C+E + DA ++ ++M NG +
Sbjct: 179 NGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ P + LI G C G + + +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 120/219 (54%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G+ PN +YN M+ FC +G S A L +M ER + P+V +Y L+
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
++ + A +L ++ML +G +P+T++Y ++++ C++ +L A + M KGC+PD+
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ T++ G+C R D ++L +MP G + N V+Y TL+ G C G + A Q
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
MIS G P + L+ G C+ GK+ +A + + + K+
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I + S A + + MLE P N ++ V + A
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV--------- 236
+L+ G++PNT +YN M+ FC + A +F M +G PDV
Sbjct: 344 -ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Query: 237 --------------------------ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+Y L+ G C +N A+DL + M++ G PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD++ YN ++ G E
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ LI G+C G+VD+ + E+ + G ++ ++
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 8/307 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKS 191
FT LIK + + AL TF + + P +L L + HR + A DLF
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR--VSEALDLFHQ 176
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ P+ ++ +M C G + A L ++M E G+ PD +Y + G+C+
Sbjct: 177 ICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 252 VNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
A++LL M + P+ + Y+ +++ LC+ + +++ L M+ KG P+IV YN
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ GFC GR A ++L++M PN+V+Y L+ +G F A + M+ +
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P+ +++I GFC ++D A + + G +P T+ ++ C + ++
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412
Query: 431 GEVLNEI 437
E+L+E+
Sbjct: 413 MELLHEM 419
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + + D A F M C P +++ + +
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR-IDDG 412
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ NT +YN ++ FC GD++ A L +M GV PD+ + L+ G
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD L+Y L+ L + K EA +L
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ M S PN+V++ TL+ G C
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 593 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ + EE+E+ +L ++ + +++
Sbjct: 653 RNMLTGFWSKEELERAVAMLEDLQRYQLE 681
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 129/248 (52%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN Y+ ++ C +G S ++ LF +M ++G+ P++ +Y ++ G C + + A L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++ML + P+ ++Y L+N+ ++ K EA +L M +G P+ + YN+++ GFC+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ R A + M + GC P++ ++ TL+ G C D + + M +G +
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI GFC VG ++ A + ++++ +G P T ++ +C +++ E+ +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 439 KVEIKGDT 446
K ++ D
Sbjct: 491 KSKMDLDA 498
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF + LP+ +N +M A + +L+ KM + + D+ S+ I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++ C S++ A+ + G PD +++TTLL+ LC ++ EA L ++
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD++ + T++ G CREGR ++A +L+ M NG P+ ++Y T V G+C G A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 362 KYMQLM--ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
++ M IS P+ + A+I G C G+ ++ + E+ G P+ T+ ++
Sbjct: 238 NLLRKMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 420 QICAGEEMEKLGEVLNEIVKVEI 442
C +L E+++ +I
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKI 319
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 8/340 (2%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
+ +LGR K +L+ ++ + Y TP + +Y ++ Y D+ K M
Sbjct: 255 FVCQLGRIKE---AHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
KP I+ LL L A + F + G+LP+T Y ++ FC GDI
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A F +M R + PDV +Y ++ G C+ + A L +M KG PD++++T L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N C+ +++A+++ M GC+P++V Y T++ G C+EG A ++L +M G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+ +Y ++V GLC G + A K + + G + L+ +C G++D+A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+E+L G P T+ +++ C +E ++LN ++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 15/391 (3%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
S S + S C V L + D +A+ + +P ++S +
Sbjct: 113 SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDS-------------FVQ 159
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D ++ T K + P +F ++ + L A + F ML + N L
Sbjct: 160 FFDLLVYTYKD--WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L A +F+ + GV N SYNI++ C G I A+ L M +G
Sbjct: 218 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV SY ++ G CR ++++ L+E M KG P++ Y +++ LCR KL EA +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
M +G PD V Y T++ GFC+ G A K +M S P++++Y ++ G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A K M KG P LI G+C G + +A V +++AG +P+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C +++ E+L+E+ K+ ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R +R A F H + P+ +Y ++ FC GD+ A LF++MF +G+ PD +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C+ + A + M+ G P+ ++YTTL++ LC++ L A +LL M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+I YN++V G C+ G +A K++ + + G + V+Y TL+ C G D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ ++ M+ KG P + L+ GFC G +++ +L +L G AP+ T+ +V
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
Q C ++ + ++ + D + E
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 132/253 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF G+ P++ ++ ++ +C G + A+ + N M + G P+V +Y L+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ ++ A +LL +M G P+ +Y +++N LC+ + EA KL+ + G N
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y T++ +C+ G A ++L++M G P +V++ L+ G C GM + +K +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++KG +P+ + ++L+K +C + A + +++ G P T+ +V C
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 425 EEMEKLGEVLNEI 437
M++ + E+
Sbjct: 645 RNMKEAWFLFQEM 657
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 7/327 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYLR 183
+TP + TY I + D A K F M CK L EL+ + +++
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF---CKGLEPDSVTFTELINGYCKAGHMK 438
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
AF + + G PN +Y ++ C GD+ A L ++M++ G+ P++ +Y ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ + AV L+ + G DT++YTTL+++ C+ ++ +A ++L M KG
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P IV +N ++ GFC G D K+L M + G PN ++ +LV C + A
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M S+G P L+KG C + EA + +E+ G + T+ +++
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVE 450
++ + EV +++ + + D I +
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI Y ++ A + M++ C P +++ L + L A +L
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEM 482
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G+ PN +YN ++ C +G+I A L + G+ D +Y LM C+ ++
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A ++L++ML KG P +++ L+N C L + KLL M KG P+ +N++
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V +C A + +DM S G P+ +Y LV G C A Q M KGF
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
S S LIKGF K EA V +++ + G A ++ + G+ + + +
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Query: 433 VLNEIVK 439
++EI++
Sbjct: 723 PIDEIIE 729
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 129/323 (39%), Gaps = 30/323 (9%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA RS+ + CK + + ++ +L+ + R D F A N +S I+
Sbjct: 70 RAEPLRRSLKPYECKF---KTDHLIWVLMKIKCDYRLVLDFFDWARSRRD-SNLESLCIV 125
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESY---------------------RILMQGL 246
+ + D+ +A +L + +ER + +S+ + Q L
Sbjct: 126 IHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVL 185
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLS---YTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ A + E MLN G V S Y T L+ C K A + G
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAIIVFREFPEVGVC 243
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
++ YN V+ C+ GR +A +L M G P+++SY T+V G C G D K
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+++M KG P+ + ++I C + K+ EA E+++ G P + ++ C
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT 446
++ + E+ +I D
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDV 386
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 120/219 (54%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G+ PN +YN M+ FC +G S A L +M ER + P+V +Y L+
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
++ + A +L ++ML +G +P+T++Y ++++ C++ +L A + M KGC+PD+
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ T++ G+C R D ++L +MP G + N V+Y TL+ G C G + A Q
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
MIS G P + L+ G C+ GK+ +A + + + K+
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I + S A + + MLE P N ++ V + A
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV--------- 236
+L+ G++PNT +YN M+ FC + A +F M +G PDV
Sbjct: 344 -ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Query: 237 --------------------------ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+Y L+ G C +N A+DL + M++ G PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD++ YN ++ G E
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ LI G+C G+VD+ + E+ + G ++ ++
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 8/307 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKS 191
FT LIK + + AL TF + + P +L L + HR + A DLF
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR--VSEALDLFHQ 176
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ P+ ++ +M C G + A L ++M E G+ PD +Y + G+C+
Sbjct: 177 ICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 252 VNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
A++LL M + P+ + Y+ +++ LC+ + +++ L M+ KG P+IV YN
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ GFC GR A ++L++M PN+V+Y L+ +G F A + M+ +
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P+ +++I GFC ++D A + + G +P T+ ++ C + ++
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412
Query: 431 GEVLNEI 437
E+L+E+
Sbjct: 413 MELLHEM 419
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + + D A F M C P +++ + +
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR-IDDG 412
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ NT +YN ++ FC GD++ A L +M GV PD+ + L+ G
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD L+Y L+ L + K EA +L
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ M S PN+V++ TL+ G C
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 593 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + EE+E+ +L ++
Sbjct: 653 RNMLTGFWSKEELERAVAMLEDL 675
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 129/248 (52%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN Y+ ++ C +G S ++ LF +M ++G+ P++ +Y ++ G C + + A L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++ML + P+ ++Y L+N+ ++ K EA +L M +G P+ + YN+++ GFC+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ R A + M + GC P++ ++ TL+ G C D + + M +G +
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI GFC VG ++ A + ++++ +G P T ++ +C +++ E+ +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 439 KVEIKGDT 446
K ++ D
Sbjct: 491 KSKMDLDA 498
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF + LP+ +N +M A + +L+ KM + + D+ S+ I
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++ C S++ A+ + G PD +++TTLL+ LC ++ EA L ++
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD++ + T++ G CREGR ++A +L+ M NG P+ ++Y T V G+C G A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 362 KYMQLM--ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
++ M IS P+ + A+I G C G+ ++ + E+ G P+ T+ ++
Sbjct: 238 NLLRKMEEISH-IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 420 QICAGEEMEKLGEVLNEIVKVEI 442
C +L E+++ +I
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKI 319
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY +I Y + D A RSM +P N I+ L L+ +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC-RDGRLKETSE 74
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G +P+ +YN ++ +C G+ A L +M G+ P+V +Y L+ +C
Sbjct: 75 VLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMC 134
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +NRA++ + M +G P+ +YTT++N ++ L EAY++L M G P IV
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G C GR +A +L+DM G LP++VSY T++ G D A + M
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I K P +LI+G C ++ EAC + +E+L P E T+ ++ C ++
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314
Query: 428 EKLGEVLNEIVK 439
K + +E+++
Sbjct: 315 NKALHLHDEMIQ 326
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 139/264 (52%), Gaps = 5/264 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
FK ++G LPN +YN M+ +C A+ M +G+ P++ ++ +++ GLC
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ ++L +M KG+VPD ++Y TL+N C++ +A L M G +P++V
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +++ C+ G A + + M G PN +Y T++ G QG+ D A + + M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
GF P +ALI G C +G+++EA G+L++++ G P ++ I+ +E+
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244
Query: 428 EKLGEVLNEIVKVEIKGDTRIVEA 451
++ + +KVE+ G + + +A
Sbjct: 245 DRAFQ-----MKVEMIGKSVLPDA 263
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 160/323 (49%), Gaps = 18/323 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKS 191
+T +I +A+ L D A + M P N ++ V R + A L +
Sbjct: 161 YTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR--MEEAIGLLQD 218
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GVLP+ SY+ ++ F N ++ A+ + +M + V+PD +Y L+QGLC + +
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A D+ ++ML PD +YTTL+N+ C++ L +A L M KG PD V YN
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL---------------VGGLCDQGM 356
++ G ++ R+ +A ++L + + +P+ V+Y TL V G C +G+
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGL 398
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A + + MI+K P+ ++ + +I G C +G V +A + +E++ PH T +
Sbjct: 399 MDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
+V + +L EV+ +I++
Sbjct: 459 LVKALFTEGMDGELNEVIGDILR 481
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 51/405 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ ++I L R ++L+ + + Y + L+ Y + +AL M
Sbjct: 55 TFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P ++ + N L A + F H G+ PN ++Y ++ F G
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGN-LNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ AY + N+M G +P + +Y L+ G C ++ A+ LL+DM+ KG +PD +SY+T
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ R ++L A+++ M K PD V Y++++ G C + R +AC + ++M +
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP---------------------- 374
P+ +Y TL+ C +G + A MI KGF P
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353
Query: 375 ----------------------------HFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
F + AL+KGFC G +DEA V E ++
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKN 413
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
P+E + +I+ C + K ++ E+V V+ T V A
Sbjct: 414 HKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L+ F+ M C P N +++ + AF +S G+ PN ++N+++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKR-TDEAFGFLRSMGLKGLEPNLITFNMII 60
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G + + +M +G +PD +Y L+ G C++ ++A+ L +M+ G
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++YT+L+NS+C+ L A + +M V+G P+ Y T++ GF ++G +A +V
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L +M +G +P++V+Y L+ G C G + A +Q M+ KG P +I GF
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++D A + E++ P T+ ++ +C + + ++ E++ +++ D
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPD 297
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 120/311 (38%), Gaps = 54/311 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y +I +A + DRA + M+ + P + +++ L R L A
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR-LTEA 282
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+F+ + P+ +Y ++ A+C GD++ A L ++M ++G +PD +Y +L+ G
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLING 342
Query: 246 L--------------------------------------------------CRKSQVNRA 255
L C K ++ A
Sbjct: 343 LNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEA 402
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ E M+NK P+ Y +++ CR + +AYKL M P V +V
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKA 462
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
EG + +V+ D+ + L + + LV +G D+ + M G P
Sbjct: 463 LFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPS 522
Query: 376 FSV-SHALIKG 385
++A+ +G
Sbjct: 523 TGTPTNAIARG 533
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 143/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N +M + GD++ + L M GV PDV +Y +
Sbjct: 156 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSV 215
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ +L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 216 LINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 275
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD+V YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 276 LSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 335
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Y MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 336 EYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 395
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ +++ E+
Sbjct: 396 CKKGDVWTGSKLMKEM 411
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T ++ L + KYF L+ YP + F L+ + +
Sbjct: 96 TKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE 155
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F ++ ++ +P N ++ + + L F L K+ GV P+ +Y+
Sbjct: 156 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD-LNEXFRLKKAMQASGVQPDVYTYS 214
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + LF++M + G++P+ ++ L+ G C+ +V+ A+++ + ML++
Sbjct: 215 VLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 274
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 275 SLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 334
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ M + V+Y L+ GLC +G A+K ++ M+S G P +I
Sbjct: 335 FEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 394
Query: 386 FCNVGKVDEACGVLEELLKAGEAP 409
FC G V +++E+ + G P
Sbjct: 395 FCKKGDVWTGSKLMKEMQRDGYVP 418
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 109/199 (54%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G++PN ++ ++ C NG + +A ++ +M + + PD+ +Y L+ GL
Sbjct: 231 ELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGL 290
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+K + +A DL+++M KG PD ++YTTL++ C++ L A++ RM + D
Sbjct: 291 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDD 350
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ G C+EGR++DA K+L +M S G P + +Y ++ C +G K M+
Sbjct: 351 VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE 410
Query: 367 MISKGFSPHFSVSHALIKG 385
M G+ P + L+ G
Sbjct: 411 MQRDGYVPSVVTYNVLMNG 429
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM C++ ++ A + + + G P +S+ TL+
Sbjct: 123 LVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 182
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + D ++ ++M G +
Sbjct: 183 NGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLV 242
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ SP + LI G C G + +A +
Sbjct: 243 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDL 302
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 303 IDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLD 349
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + + E G + D +E YR+ +++ L +
Sbjct: 69 DIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 128
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L++S C++ ++R A + + G P +V +NT++ G+ +
Sbjct: 129 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 188
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ + M ++G P++ +Y L+ GLC + D + M+ G P+
Sbjct: 189 GDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTF 248
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + +++L +P T+ ++ +C ++++ ++++E+
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSM 308
Query: 440 VEIKGD 445
+K D
Sbjct: 309 KGLKPD 314
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 10/329 (3%)
Query: 126 YPVTPS------LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
YP PS +FT +IK ++ L + A+ M +F+C P N IL++L R
Sbjct: 183 YPSKPSVCLSKAIFTNVIKFGVKNKLSE-AIGLIGKMKDFSCFPDNASYNTILDVLWLCR 241
Query: 180 N-YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + D + G++P+ +YN ++ +C G + A+ NKM E+ PD+ +
Sbjct: 242 SGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFT 301
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
IL++GLC + ++ A+ L ++KG D ++Y T+++ LC++ + EA+ LL M+
Sbjct: 302 CNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEME 361
Query: 299 VKGCNPDIVHYNTVVLGFC-REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K PD YN ++ EG+ A + M P+L + L+ GLC +GM
Sbjct: 362 EKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGML 421
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL-LKAGEAPHEDTWVM 416
D A K ISKG + + +I G C G+ +EA +L E+ K G P + T+
Sbjct: 422 DNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNT 481
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
I+ C ++EK + N++V+ K D
Sbjct: 482 IILGYCREGQVEKAFQFRNKMVEKSFKPD 510
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 146/303 (48%), Gaps = 5/303 (1%)
Query: 130 PSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFT L++ + D ALK F + + N I+ L + AFD
Sbjct: 297 PDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF-EEAFD 355
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFC-FNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + + P+ +YN ++ A G + A+ NKM E+ PD+ + IL++GL
Sbjct: 356 LLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 415
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPD 305
C + ++ A+ L ++KG D ++Y T+++ LC++ + EA+ LL M+ K G PD
Sbjct: 416 CTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPD 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YNT++LG+CREG+ A + M P+L + L+ GLC +GM A K
Sbjct: 476 QTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFN 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
ISKG + + +I G C G+ +EA +L E+ + P T+ I+ +
Sbjct: 536 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG 595
Query: 426 EME 428
ME
Sbjct: 596 RME 598
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 24/325 (7%)
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH------------------ 178
I Y N P A + F M + KP N ++ LV +
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201
Query: 179 ---RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA--FCFNGDISIAYTLFNKMFERGVM 233
+N L A L P+ SYN ++ C +G + N++ E G++
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P +Y ++ G CR+ QV +A M+ K F PD + LL LC + L A KL
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
KG D V YNT++ G C+EGR +A +L +M P+ +Y ++ L D
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALAD 381
Query: 354 -QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+G + A ++ M+ K F P + L++G C G +D A + + G+A
Sbjct: 382 AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEI 437
T+ I+ +C E+ ++L E+
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEM 466
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY +I Y ++A + M+E + KP N +L L T L A
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTE-GMLDNA 318
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF + G + +YN ++ C G A+ L +M E+ + PD +Y ++
Sbjct: 319 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCA 378
Query: 246 LC-RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L + QV +A M+ K F PD + LL LC + L A KL KG
Sbjct: 379 LADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI 438
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D V YNT++ G C+EGR +A +L +M NG +P+ +Y T++ G C +G + A ++
Sbjct: 439 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQF 498
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M+ K F P + L++G C G + +A + + G+A T+ I+ +C
Sbjct: 499 RNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCK 558
Query: 424 GEEMEKLGEVLNEIVKVEIKGD 445
E+ ++L E+ + ++ D
Sbjct: 559 EGRFEEAFDLLAEMKEKKLGPD 580
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 8/272 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR-- 154
TY +I L + F D+L + E + P +TY + A ++ + K F+
Sbjct: 336 TYNTIISGLCKEGRFEEAFDLLAEM--EEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393
Query: 155 -SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M+E + KP N +L L T L A LF + G + +YN ++ C
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTE-GMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452
Query: 214 NGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G A+ L +M E+ G++PD +Y ++ G CR+ QV +A M+ K F PD
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLF 512
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ LL LCR+ L +A KL KG D V YNT++ G C+EGR +A +L +M
Sbjct: 513 TCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 572
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
P+ +Y ++ L D G + A+++M
Sbjct: 573 KEKKLGPDCYTYNAILCALADAGRME-AEEFM 603
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 164/318 (51%), Gaps = 7/318 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI Y + A + M E C+P N ++ + L A
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-SKWGKLESASF 499
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
F+ + G+ PN SY ++ +G + IA +L +M E G P+VESY ++ GL
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++++ + A + + M+ +G +P+ ++YTTL++ LCR + + A+K+ M+ + C P++
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G C+EG+A +A E M GC P L +Y TLV GLC +G F A++ ++ M
Sbjct: 620 TYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+GF P + ++L+ C +VD A + + G H + ++ +C ++
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735
Query: 428 EKLGEVLNEIVKVEIKGD 445
E+ + + +++ E D
Sbjct: 736 EEAQALFDNMLEKEWNAD 753
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 192/394 (48%), Gaps = 23/394 (5%)
Query: 46 QQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKL 105
Q + SS SP V +++A D + F + S++P ++H+ + ++ ++ +L
Sbjct: 59 QWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRL 118
Query: 106 GRAKYFSLIDDILITL------KSEHYPVTP------------SLF---TYLIKIYAESN 144
R + F+ D I I + + E V SL+ T LI++ A+
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL-AKFE 177
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ + A ++ ML +P N ++ +L + + +R A + ++ + P+ +Y
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLINIL-SKKGKVREAELILSQIFQYDLSPDVFTY 236
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ C N ++ +A+ +F++M + G P+ +Y L+ GLC + +V+ A+D+LE+M+
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P +YT + +LC + EA +L+ RMK +GC P++ Y ++ G R G+
Sbjct: 297 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 356
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M G +PN V+Y L+ LC G F A K M G + + +IK
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G C G +++A + E++LK G P T+ ++
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 149/331 (45%), Gaps = 44/331 (13%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRIL-ELLVTHRNYLRPAF 186
P++ TY I S L + A+ + ML+ P N ++ EL V R A
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR--FSTAL 393
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F HG L NT++YN +++ C GDI A LF KM + G +P V +Y L+ G
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453
Query: 247 CRKSQVNRAVDLL-----------------------------------EDMLNKGFVPDT 271
K VN A LL ++M+ G P+
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SYT L++ + K+ A LL RM+ GCNP++ YN V+ G +E R +A K+ +
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G LPN+++Y TL+ GLC G A K M + P+ +LI G C GK
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
DEA E + + G P DT+ +V +C
Sbjct: 634 ADEA----ERMSEIGCEPTLDTYSTLVSGLC 660
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 146/297 (49%), Gaps = 3/297 (1%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+++TY + I A + A++ M + C+P + ++ L + L A
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL-SRLGKLEVA 357
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L+ K G++PNT +YN ++ C G S A +F+ M G + + ++Y +++G
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + +A+ L E ML G +P ++Y TL+N K + A +LL MK GC PD
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN +V GF + G+ A ++M G PN VSY L+ G G D+A ++
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G +P+ +A+I G + EA + +++++ G P+ T+ ++ +C
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 3/296 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
Y ++P +FTY LI + + D A F M++ C P + ++ L + +
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC-NEGRV 284
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D+ + + G+ P +Y + + A C A L +M +RG P+V++Y L
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GL R ++ A+ L ML +G VP+T++Y L+N LC + A K+ M+ G
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ YN ++ G C G A + E M G LP +V+Y TL+ G +G + A +
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ LM G P + L+ GF GK++ A +E+++ G P+ ++ ++
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 11/304 (3%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
P +T LI +++ D AL + M E C P + N ++ L + N A +
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL-SKENRFSEAEKI 570
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ G+LPN +Y ++ C NG A+ +F+ M +R +P++ +Y L+ GLC+
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ + + A E M G P +Y+TL++ LCRK + EA +L+ MK +G PD
Sbjct: 631 EGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 686
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y ++++ C+ A K+ + + G +L YR L+ LC G + A+ M+
Sbjct: 687 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 746
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
K ++ V L+ G G++D +L + P+ T+V++ G E+
Sbjct: 747 EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL------GRELS 800
Query: 429 KLGE 432
++G+
Sbjct: 801 RIGK 804
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR-KSQVNRAVDLLEDM 262
Y I R F + +++ ++ N++ V + RILM CR + ++ R D L ++
Sbjct: 96 YWISKRPF-YKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEI 154
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
GF S TLL L + + + A L +M G P ++ +NT++ ++G+
Sbjct: 155 SGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKV 214
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + P++ +Y +L+ G C D+A M+ +G P+ L
Sbjct: 215 REAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL 274
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
I G CN G+VDEA +LEE+++ G P T+ + + +C
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
PDR + + S+L +CK L V H A +F S G + Y
Sbjct: 682 PDREI--YYSLLIAHCKNLE----------VDH------ALKIFHSIEAKGFQLHLSIYR 723
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ A C G + A LF+ M E+ D + +L+ GL ++ +++ + LL M +K
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
F P+ +Y L L R K E+ L ++KV
Sbjct: 784 NFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 817
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 148/302 (49%), Gaps = 18/302 (5%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L K+ E+ PD TF +++ CK RILE A + K
Sbjct: 253 LTKMVRENVDPDDY--TFNILIDALCKE-----GRILE-----------AQGVLAMMSKR 294
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +YN +M +C ++ A LFN+M +RG+ PDV +Y +L+ G C+ V+ A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L +++ NK VP SY +L++ LC ++ KLL M PD+V YN ++
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+EGR ++A VL M G PN+V+Y ++ G C + +VAK M+ G P
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+C VDEA + +E+ P ++ ++ +C + + E+L+
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534
Query: 436 EI 437
E+
Sbjct: 535 EM 536
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ F M+ P +++L +V +Y A LF G+ P+ ++ I
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHY-PTAISLFTQLQSKGISPSIATFTI 95
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + + A++L + + G P++ ++ ++ G C + +A+D +++L +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
++ D +Y TL+N L + +++ A LL M+ P++V Y+ ++ G C++G DA
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + G L + V+Y +L+ G C G + + + M+ + P + LI
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G++ EA GVL + K GE P T+ ++ C+ E + + E+ N +VK ++ D
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ A L + G+L + +YN ++ C G L KM V PD ++
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LC++ ++ A +L M +G PD ++Y L+ C ++ + EA +L RM +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+++YN ++ G+C+ +A + +++ + +P + SY +L+ GLC+ G
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
KK + M P + LI C G++ EA GVL ++K G P+ T+ ++
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGD 445
C + ++ N +VK ++ D
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPD 474
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 154/331 (46%), Gaps = 25/331 (7%)
Query: 108 AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
A Y SLID + + + H L +++ + PD + T+ +++ CK
Sbjct: 371 ASYNSLIDGLCNSGRISHVK------KLLDEMHGSAQPPD--VVTYNILIDALCKE---- 418
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
RILE A + K GV PN +YN MM +C ++++A +FN+M
Sbjct: 419 -GRILE-----------ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ G+ PD+ +Y +L+ G C+ V+ A+ L ++M +K +PD SY +L++ LC ++
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+LL M G +PD++ YN ++ FC+ + D L G P+ + +
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKT-QPFDKAISLFRQIVEGIWPDFYTNHAI 585
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V LC +A+ ++ ++ G SP+ LI C G EA +L ++
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P T+ +I+ + E +K ++ E++
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 147/312 (47%), Gaps = 3/312 (0%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++PS+ FT LI Y + A ++L+ +P N I+ + + A
Sbjct: 86 ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFK-A 144
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D ++ G L + +Y ++ NG I A L +M + V P++ Y L+ G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A+ L + +G + D ++Y +L++ C + +E +LL +M + +PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+N ++ C+EGR ++A VL M G P++V+Y L+ G C + A++
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G P + LI G+C VDEA + +EL P ++ ++ +C
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 426 EMEKLGEVLNEI 437
+ + ++L+E+
Sbjct: 385 RISHVKKLLDEM 396
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 39/313 (12%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
++Y LI L + S + +L + P P + TY LI + AL
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP--PDVVTYNILIDALCKEGRILEALGVL 428
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ KP N +++ RN + A D+F K G+ P+ +YN+++ +C
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCL-RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A LF +M + ++PD+ SY L+ GLC ++ +LL++M + G PD ++
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVIT 547
Query: 274 YTTLLNS----------------------------------LCRKKKLREAYKLLCRMKV 299
Y LL++ LC+ +KL+ A L + +
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLM 607
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC+P++ Y ++ C++G +A +L M N P+ +++ ++G L + D
Sbjct: 608 HGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDK 667
Query: 360 AKKYMQLMISKGF 372
A+K + MI++G
Sbjct: 668 AEKLREEMIARGL 680
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%)
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A T FN+M P + L+ + R A+ L + +KG P ++T
Sbjct: 35 NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L+N + A+ LL + G P++V +NT++ GFC G A +++ +
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G L + +Y TL+ GL G A +Q M P+ + ALI G C G V +A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G+ ++ + G T+ ++ C+ +++ ++L ++V+ + D
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P + TY L+ + ++ D+A+ FR ++E P + I++ L L+ A
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK-LKMAE 599
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
D K HG PN ++Y I++ A C +G A L +KM + PD ++ I++ L
Sbjct: 600 DALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVL 659
Query: 247 CRKSQVNRAVDLLEDMLNKGFV 268
++++ ++A L E+M+ +G V
Sbjct: 660 LQRNETDKAEKLREEMIARGLV 681
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 189/406 (46%), Gaps = 13/406 (3%)
Query: 54 NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSL 113
NS + S ++ ++ + P A IFD + R + TY L+ L + K+F
Sbjct: 53 NSCRTVHSRTKLMNILIGKGKPHEANLIFDNLV-EDGHRPTLITYTTLVAALTKLKHFES 111
Query: 114 IDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
I L+ K E + P L+ +I ++ES A+K F+ M + CKP N +
Sbjct: 112 I--FLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTL 169
Query: 172 LELLVTHRNYLRPAFDLFKSAH----KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
++ + N +P L K H V PN ++YNI++RA+C +I A+ + +KM
Sbjct: 170 IK---GYGNAGKPEEGL-KMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKM 225
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G+ PDV +Y IL + +K + RA DL+ +M + P+ + ++N C++ +
Sbjct: 226 VASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNM 285
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA + + RMK G +P++V +N+++ GF + L M G P+++++ T+
Sbjct: 286 IEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTI 345
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G+ D ++ M G P L KG+ G+ + A VL + K+G
Sbjct: 346 MNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGV 405
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
P+ I+ C+ +ME V ++ ++ I + + E I
Sbjct: 406 RPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLI 451
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 162/326 (49%), Gaps = 9/326 (2%)
Query: 77 LAKEIFDYASR---QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
LA+E+F R +PN TY LI L RA ++I +S P
Sbjct: 141 LAREVFQEMKRNGCKPN----PITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITC 196
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-FDLFKSA 192
T ++ +++ D ALK M + +P + ++ H R F + A
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G L +Y + A C G + A ++ + GV+PDV +Y +L+ R Q
Sbjct: 257 RKGGSL-EAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ +++LLEDM G PD ++Y+TL+N LC+++K ++A++LL M+ G P++V YN+V
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G+ + +V E M + C P++V+Y ++ GL GM D A K +L+ S
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGV 398
P + +I C GK++EACG+
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEACGM 461
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 174/377 (46%), Gaps = 10/377 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY IL+ L R+ L ++ +K P + LI+ + + D AL R M
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL---RVM 181
Query: 157 LEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+E LP + ++ + + L A + + GV PN +Y+ ++ F +
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241
Query: 215 GDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++ F + R G + +Y + LC+ ++RA +E++ G VPD ++
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ L+N+ R + + +LL M+ G PD+V Y+T++ C+E + DA ++LE M
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELME 361
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G PN+V+Y +++ GLC G D + ++M+ SP ++ G G +D
Sbjct: 362 AAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLD 421
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVKVEIKGDTRIVEAG 452
A + E + + E P + M++ +C AG+ E G + ++V + GD I A
Sbjct: 422 SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACG--MYHGMEVTVAGDN-ICRAL 478
Query: 453 IGLEDYLIGKTRSRPRR 469
GL L R+ R
Sbjct: 479 AGLVAALCDAKRTDSAR 495
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
RS++E K + Q +L + R+ LF GV+ +Y +++ C
Sbjct: 8 RSVVEAGAK-VDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCG 66
Query: 214 NGDISIAYTLFNKMFERGV-MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A L ++ GV P V Y ++ GLCR S+V A +LE M+ + VP+
Sbjct: 67 AGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT LLN LCR K + A ++ MK GC P+ + Y T++ R G +A +V+ +
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ 184
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S ++++ T+VGGLC D A K+M+ M G P+ L+ GF G++
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL 244
Query: 393 DEACGVLEE 401
D EE
Sbjct: 245 DRVIRFFEE 253
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L +S + G +++++ ++ S LF + RGV+ +Y++++ GLC
Sbjct: 6 LERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLC 65
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
N+A++L+ + L+ + P Y ++ LCR ++ +AYK+L +M + P++
Sbjct: 66 GAGMANQALELVRE-LSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G CR + A +V ++M NGC PN ++Y TL+ L G D A + M
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ 184
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S ++ G C ++D+A +EE+ + G P+E T+ +V
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 15/230 (6%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L + E G D +++ +L L R+S+ + V L + ++G V +Y +++
Sbjct: 3 AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62
Query: 280 SLCRKKKLREAYKLLCRMKVKGC-NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
LC +A +L+ ++ G P + YN ++ G CR R +DA KVLE M +
Sbjct: 63 GLCGAGMANQALELV--RELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+ +Y L+ GLC +A++ Q M G P+ LI+ G++DEA V
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
Query: 399 LEELLKAGEAPHED-TWVMIVPQICAG----------EEMEKLGEVLNEI 437
+ E ++ E P + T IV +C EEM ++G NE+
Sbjct: 181 MIE-QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEV 229
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 255 AVDLLE-DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A LLE ++ G D+ ++T L L R+ K E +L + +G Y VV
Sbjct: 2 AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C G A A +++ ++ S P + Y ++ GLC A K ++ M+ +
Sbjct: 62 DGLCGAGMANQALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ L+ G C K A V +E+ + G P+ T+ ++ + E+++ V
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180
Query: 434 LNEIVKVEIKGD 445
+ E +E+ D
Sbjct: 181 MIEQRSLELPTD 192
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 190/440 (43%), Gaps = 61/440 (13%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILIL------KLGRAKYFSLIDDIL 118
+QK++ + PL A +F+ +S Q F+H++ + L+ KL A+ SLI IL
Sbjct: 10 IQKMV--KIPPLQALSLFN-SSIQQGFQHTHHSISFLLQHLLDHHKLPHAQ--SLILQIL 64
Query: 119 ITLKSEHYPVTPSLFTYL-----------------IKIYAESNLPDRALKTFRSMLEFNC 161
S + PSL +L I + +S L D+AL F M++
Sbjct: 65 SNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGL 124
Query: 162 KPLPKQLNRILELLVTHRNY---------------------------------LRPAFDL 188
P N +L LV + L +F L
Sbjct: 125 VFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQL 184
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G+ PN Y ++ C NGDI A F+KM E G++ + ++ +L+ GL +
Sbjct: 185 LGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFK 244
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
K DL E M G P+ +Y L+N C + K+ A+ L M+ +G ++V
Sbjct: 245 KGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YNT++ G CRE R +A K+++ M PNL++Y TL+GG CD G D A + +
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 364
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
S G SP + LI+G+ G + E+ G +P + T +++ +EME
Sbjct: 365 SNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEME 424
Query: 429 KLGEVLNEIVKVEIKGDTRI 448
K ++ + + K + D +
Sbjct: 425 KAFQIYSSMEKFGLVPDVYV 444
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 142/302 (47%), Gaps = 35/302 (11%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ FDLF+ +G+ PN +YN +M +C G I A+ LF++M ERGV +V +Y L
Sbjct: 249 KDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTL 308
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G+CR+ +V A L++ M P+ ++Y TL+ C L +A LL ++K G
Sbjct: 309 IGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGL 368
Query: 303 NPDIVHYNTVVLGFCR--------------EGRAID----ACKVLED------------- 331
+P +V YN ++ G+ + EGR I C VL D
Sbjct: 369 SPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQ 428
Query: 332 ----MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
M G +P++ Y L+ GLC +G + K + M P + + +I G+C
Sbjct: 429 IYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYC 488
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
A +L E+ G P+ ++ I+ +C + E+ +L++++++++K
Sbjct: 489 KEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSAS 548
Query: 448 IV 449
I+
Sbjct: 549 IL 550
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 135/290 (46%), Gaps = 3/290 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L+TY L+ Y RA F M E + N ++ + + A
Sbjct: 265 PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREER-VWEAEK 323
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K V PN +YN ++ FC G++ A +L +++ G+ P + +Y IL++G
Sbjct: 324 LVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYS 383
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ DL +M +G P ++ T L+++ R +++ +A+++ M+ G PD+
Sbjct: 384 KAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVY 443
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G C +G ++ K+ M P+ V Y T++ G C + A + ++ M
Sbjct: 444 VYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM 503
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+KG P+ + ++I C GK +EA +L+++++ P MI
Sbjct: 504 EAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L +G+ P+ +YNI++ + G+ L +M RG+ P + +
Sbjct: 353 LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTV 412
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ R ++ +A + M G VPD Y L++ LC K ++E+ KL M
Sbjct: 413 LIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMH 472
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P V YNT++ G+C+E + A ++L +M + G +PN+ SY +++G LC G ++ A+
Sbjct: 473 VEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAE 532
Query: 362 KYMQLMISKGFSPHFSVSHALIKG 385
+ MI P S+ + + K
Sbjct: 533 VLLDKMIELQLKPSASILNMISKA 556
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 191/395 (48%), Gaps = 4/395 (1%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK 109
S+ N S SP V +++ S+ ++A F +A +Q F++S Y LI LG+ K
Sbjct: 100 SLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIK 159
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
F +I +++ ++S+ +T F + + YA + A++TF M +F +P+ N
Sbjct: 160 QFKMIWNLVNDMRSKGL-LTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFN 218
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
R+L+ L R+ R A ++F P+ KSY I++ + ++ ++ +M +
Sbjct: 219 RLLDALCKSRHVER-AQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKD 277
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G PD +Y IL+ C+ + + AV+L M +P Y TL+N L +++L E
Sbjct: 278 EGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTE 337
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A + R K G P+ YN VV +C+ R DA +++++M G P +Y ++
Sbjct: 338 ALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILH 397
Query: 350 GLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
L A + Q M S+ G P S +++ FCN +VD A V +E+ G
Sbjct: 398 HLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVL 457
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
P + ++ +C ++++ + +E++ + I+
Sbjct: 458 PGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIR 492
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+LE+L N A F+ A K G +T++YN ++ A + + L N M
Sbjct: 114 VLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRS 173
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+G++ E++ ++ + R +V AV+ E M G P + LL++LC+ + +
Sbjct: 174 KGLLTQ-ETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVER 232
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +MK + PDI Y ++ G+ +E + +V +M G P+ V+Y L+
Sbjct: 233 AQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILIN 292
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C +D A + M + P + LI G + ++ EA E +G P
Sbjct: 293 AHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTP 352
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
T+ +V C M+ +++E+ K + TR
Sbjct: 353 EAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTR 390
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 142/256 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ S+N ++ + GD+ + L M GV PDV + +
Sbjct: 152 IRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTV 211
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L +ML+KG VP+ +++TTL++ C+ ++ A ++ +M +G
Sbjct: 212 LINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQG 271
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G CR+G A ++ +M G P+ ++Y TL+ G C +G + A
Sbjct: 272 YSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI + ALI G C G+ +A +L E+L G P T+ MI+
Sbjct: 332 ELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGF 391
Query: 422 CAGEEMEKLGEVLNEI 437
C +++ ++L E+
Sbjct: 392 CKQGDVKTASKLLKEM 407
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ + +P
Sbjct: 111 LMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPS 170
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ + +++ C + A LF
Sbjct: 171 VVSFNTLINGYIRLGD-LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELF 229
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
N+M ++G++P+ ++ L+ G C+ +V+ A+++ + ML +G+ PD ++Y TL+ LCRK
Sbjct: 230 NEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRK 289
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A L+ M +KG PD + Y T++ G C+EG A ++ + M + V+Y
Sbjct: 290 GDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAY 349
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I GFC G V A +L+E+ +
Sbjct: 350 TALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQR 409
Query: 405 AGEAP 409
G P
Sbjct: 410 DGHVP 414
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 7/314 (2%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---HRNYLRPAFDLFKSA 192
LI+I D A F ++LE K + + L+T +LR A + F+
Sbjct: 35 LIQIVVSRKGKDSASAVFAAILE--TKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLT 92
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
KH + ++ + + + ++ E G + + ILM C++ ++
Sbjct: 93 RKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEI 152
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + + + G P +S+ TL+N R L + ++L M G +PD V+ NTV
Sbjct: 153 RLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPD-VYTNTV 211
Query: 313 VL-GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+E + +A ++ +M G +PN V++ TL+ G C G D+A + + M+ +G
Sbjct: 212 LINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQG 271
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+SP + LI G C G + +A ++ E+ G P + T+ ++ C ++E
Sbjct: 272 YSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331
Query: 432 EVLNEIVKVEIKGD 445
E+ +++ I+ D
Sbjct: 332 ELRKRMIEESIRLD 345
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +++K + G P+ +YN ++ C GD+ A L +M +G+ PD +Y L+
Sbjct: 260 ALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLID 319
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C++ + A +L + M+ + D ++YT L++ LC++ + +A K+L M G P
Sbjct: 320 GSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKP 379
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ Y ++ GFC++G A K+L++M +G +P +V+
Sbjct: 380 ENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + +S D AL+ ++ ML P N ++ L + L+ A DL
Sbjct: 244 FTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLC-RKGDLKQARDLIVEM 302
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +Y ++ C GD+ A+ L +M E + D +Y L+ GLC++ +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRA 362
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
A +L +ML+ G P+ +YT ++N C++ ++ A KLL M+ G P +V
Sbjct: 363 VDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVV 417
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 159/313 (50%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY LI + A+ F M+ N P + +++ +R A
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF-CKEGKVREA 287
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ K V + +YN +M +C ++ A +LFN M +RGV PDV SY I++ G
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V+ A+ L E+M K P+ ++Y +L++ LC+ + A +L+ M +G +
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I+ YN+++ C+ A +L + G P++ +Y L+ GLC G D A+K +
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG+SP+ +LI GFCN G DE +L ++ G P+ T+ +++ + +
Sbjct: 468 DLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKD 527
Query: 426 EMEKLGEVLNEIV 438
E +K ++L E++
Sbjct: 528 ENDKAEKLLREMI 540
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 153/296 (51%), Gaps = 4/296 (1%)
Query: 153 FRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F +L N P+P + +IL L+ + Y + A L + +G+ P+ + N++M
Sbjct: 45 FNRLLHKN-NPIPPAIEFGKILGSLLKAKQY-QTALSLSQQMEFNGIKPDFITCNLLMNC 102
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
F G I ++++F K+ ++G PD ++ IL++GLC K +V++A+ + ++ +GF D
Sbjct: 103 FSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLD 162
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+SY TL+N LCR + + A +LL R+ K P++V Y+T++ C++ DA +
Sbjct: 163 QVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYC 222
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M S P++V+Y +L+ G C G A MIS +P+ LI GFC G
Sbjct: 223 EMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEG 282
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
KV EA VL ++K T+ ++ C +++ K + N + + + D
Sbjct: 283 KVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 134/255 (52%), Gaps = 16/255 (6%)
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
T+ S+++ C L KQ+N+ A LF + GV P+ SY+IM+ F
Sbjct: 305 TYNSLMDGYC--LVKQVNK--------------AKSLFNVMAQRGVTPDVWSYSIMINGF 348
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A LF +M + + P+V +Y L+ GLC+ + + A++L+++M ++G +
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y ++L+++C+ + +A LL ++K KG PDI Y ++ G C+ GR DA KV ED
Sbjct: 409 ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ G PN+ +Y +L+ G C++G FD + M G P+ LI +
Sbjct: 469 LLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528
Query: 392 VDEACGVLEELLKAG 406
D+A +L E++ G
Sbjct: 529 NDKAEKLLREMIARG 543
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 145/282 (51%), Gaps = 2/282 (0%)
Query: 157 LEFN-CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+EFN KP N ++ + +++ +F +F K G P+ ++ I+++ C G
Sbjct: 84 MEFNGIKPDFITCNLLMNCF-SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKG 142
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A +K+ +G D SY L+ GLCR + AV LL + K P+ + Y+
Sbjct: 143 EVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYS 202
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T+++S+C+ K + +A+ L C M K +PD+V Y++++ GFC G+ A + M S+
Sbjct: 203 TIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISD 262
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
PN+ ++ L+ G C +G AK + +M+ K ++L+ G+C V +V++A
Sbjct: 263 NINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKA 322
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + + G P ++ +++ C + +++ ++ E+
Sbjct: 323 KSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 35/276 (12%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDL+ + P+ +Y+ ++ FC G + A LFN+M + P+V ++ I
Sbjct: 214 VNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSI 273
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ +V A ++L M+ K D ++Y +L++ C K++ +A L M +G
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG------ 355
PD+ Y+ ++ GFC+ +A K+ E+M PN+V+Y +LV GLC G
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393
Query: 356 -----------------------------MFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
D A + + KG P LI G
Sbjct: 394 ELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
C VG++D+A V E+LL G +P+ T+ ++ C
Sbjct: 454 CKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A L + V PN Y+ ++ + C + ++ A+ L+ +M + + PDV +Y L
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++ AVDL M++ P+ +++ L++ C++ K+REA +L M K
Sbjct: 240 ISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV 299
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D+V YN+++ G+C + A + M G P++ SY ++ G C M D A K
Sbjct: 300 KLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMK 359
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M K P+ ++L+ G C G+ A +++E+ G+ + T+ I+ IC
Sbjct: 360 LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAIC 419
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
++K +L +I + I+ D
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPD 442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 9/216 (4%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCK---PLPKQLNRILELLVTHRNYL 182
VTP +++Y I I + + + D A+K F M +CK P N +++ L
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEM---HCKQIFPNVVTYNSLVDGL-CKSGRT 389
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A +L H G N +YN ++ A C N + A L K+ E+G+ PD+ +Y +L
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ +++ A + ED+L KG+ P+ +YT+L+N C K E +L +MK GC
Sbjct: 450 INGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGC 509
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
P+ + Y ++ + A K+L +M + G L
Sbjct: 510 IPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + N A+ M+E +P N I++ L R + A D FK +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR-VNDALDFFKEIGRK 219
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +Y ++ C +G + A L M +R + P+V +Y L+ + +V A
Sbjct: 220 GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEA 279
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++ E+M+ PD ++Y++L+N LC ++ EA ++ M KGC PD+V YNT++ G
Sbjct: 280 KEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ R D K+ M G + N V+Y TL+ G G D A+++ M S G SP
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ L+ G C+ G +++A + E++ K+ T+ ++ +C ++E
Sbjct: 400 IWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 141/282 (50%), Gaps = 5/282 (1%)
Query: 149 ALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
A+ FR M++ +P P NR+L +V + Y L K G+ + ++NI
Sbjct: 69 AINLFREMVK--TRPFPSIVDFNRLLSAIVKMKKY-DVVISLGKKMEVLGIRNDLYTFNI 125
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC +S+A ++ KM + G PD + L+ G CR+++V+ AV L++ M+ G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ PD ++Y +++SLC+ +++ +A + KG P++V Y +V G C GR DA
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++L DM PN+++Y L+ G AK+ + M+ P +LI G
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C ++DEA + + ++ G P ++ ++ C + +E
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 162/334 (48%), Gaps = 5/334 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K E + L+T+ +I + AL ML+ +P + +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSL 161
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ RN + A L + G P+ +YN ++ + C ++ A F ++ +G
Sbjct: 162 VNGF-CRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ P+V +Y L+ GLC + N A LL DM+ + P+ ++Y+ LL++ + K+ EA
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M +PDIV Y++++ G C R +A ++ + M S GC P++VSY TL+ G
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + K + M +G + + LI+GF VG VD+A ++ G +P
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ +++ +C +EK + ++ K E+ D
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLD 434
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 133/257 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF+ K P+ +N ++ A + +L KM G+ D+ ++ I
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C QV+ A+ +L ML G+ PD ++ +L+N CR+ ++ +A L+ +M G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YN ++ C+ R DA +++ G PN+V+Y LV GLC+ G ++ A
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ MI + +P+ AL+ F GKV EA + EE+++ P T+ ++ +
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 422 CAGEEMEKLGEVLNEIV 438
C + +++ ++ + +V
Sbjct: 306 CLHDRIDEANQMFDLMV 322
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 11/252 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY LI + D A + F M+ C P N ++ + +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKR-VEDG 349
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ + G++ NT +YN +++ F GD+ A F++M GV PD+ +Y IL+ G
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + +A+ + EDM D ++YTT++ +C+ K+ +A+ L C + +KG PD
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYM 364
IV Y T++ G C +G + + M G + N LC G ++ + +
Sbjct: 470 IVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN-------DSMLCLGDGDITISAELI 522
Query: 365 QLMISKGFSPHF 376
+ M+S G++P
Sbjct: 523 KKMLSCGYAPSL 534
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY L+ S + A + R M++ P + +L+ V + L A
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE-A 279
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F+ + + P+ +Y+ ++ C + I A +F+ M +G PDV SY L+ G
Sbjct: 280 KEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +V + L M +G V +T++Y TL+ + + +A + +M G +PD
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C G A + EDM + ++V+Y T++ G+C G + A
Sbjct: 400 IWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFC 459
Query: 366 LMISKGFSPHFSVSHALIKGFCNVG 390
+ KG P ++ G C G
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF +M + P + + L+ + + + + + L + M G D ++ ++N
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ A +L +M G PD V ++V GFCR R DA +++ M G P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y ++ LC + A + + + KG P+ AL+ G CN G+ ++A +L
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++K P+ T+ ++ ++ + E+ E+V++ I D
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPD 294
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R +++ A++L +M+ P + + LL+++ + KK L +M+V G D+
Sbjct: 62 RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N V+ FC + A VL M G P+ V+ +LV G C + A + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G+ P +A+I C +V++A +E+ + G P+ T+ +V +C
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 428 EKLGEVLNEIVKVEI 442
+L +++K +I
Sbjct: 242 NDAARLLRDMIKRKI 256
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY ILI R SL +L + Y L+ + N A+
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P N ++ L H N A L G P+ +Y I++ C
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A +L KM + + P V Y ++ LC VN A++L +M NKG P+ +
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L+ LC + +A +LL M + NP++V ++ ++ F +EG+ ++A K+ ++M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++ +Y +L+ G C D AK +LMISK P+ + LIKGFC +V
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
DE + E+ + G + T+ ++ E + V ++V
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 3/301 (0%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY I + + D AL + M + +P N I++ L ++N + A +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN-VNDALN 277
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ PN +YN ++R C G S A L + M ER + P+V ++ L+
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P++V
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R + ++ +M G + N V+Y TL+ G D A+ + M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G CN GKV+ A V E L ++ P T+ +++ +C ++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 428 E 428
E
Sbjct: 518 E 518
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 165/335 (49%), Gaps = 5/335 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L + ++ ++ +L+TY LI + + AL M++ +P LN +
Sbjct: 98 DLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL 157
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L H N + A L + G P++ ++N ++ + S A L ++M +G
Sbjct: 158 LNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
PD+ +Y I++ GLC++ ++ A+ LL+ M P + Y T++++LC K + +A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M KG P++V YN+++ C GR DA ++L DM PN+V++ L+
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+G A+K MI + P +LI GFC ++DEA + E ++ P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +++ E+ E+ + + G+T
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + +++L + N L + G+ N +Y
Sbjct: 63 DDAVNLFGDMVK--SRPFPSIVEFSKLLSA-IAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ FC +S+A + KM + G PD+ + L+ G C ++++ AV L+ M+
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ PD+ ++ TL++ L R + EA L+ RM VKGC PD+V Y VV G C+ G
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L+ M P +V Y T++ LC+ + A M +KG P+ ++LI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN G+ +A +L ++++ P+ T+ ++ ++ + ++ +E++K I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 445 D 445
D
Sbjct: 360 D 360
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 130/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF K P+ ++ ++ A + +L +M G+ ++ +Y I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ++ A+ +L M+ G+ PD ++ +LLN C ++ +A L+ +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD +NT++ G R RA +A +++ M GC P+LV+Y +V GLC +G D+A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M P + + +I CN V++A + E+ G P+ T+ ++ +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 302 CNYGRWSDASRLLSDMIERKI 322
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 153/342 (44%), Gaps = 3/342 (0%)
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
Y ++ D + + + ++ + P++ TY LI+ A + M+E P
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+ +++ V L A L+ K + P+ +Y+ ++ FC + + A +F M
Sbjct: 329 FSALIDAFVKE-GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ P+V +Y L++G C+ +V+ ++L +M +G V +T++YTTL++ + ++
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
A + +M G PDI+ Y+ ++ G C G+ A V E + + P++ +Y +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G+C G + + KG P+ ++ GFC G +EA + E+ + G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
P T+ ++ + E++ E+ GD +
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 248 RKSQVNR--------AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
RK +NR AV+L DM+ P + ++ LL+++ + K L +M+
Sbjct: 50 RKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 109
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G + ++ Y+ ++ FCR + A VL M G P++V+ +L+ G C
Sbjct: 110 LGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M+ G+ P + LI G + EA +++ ++ G P T+ ++V
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 420 QIC 422
+C
Sbjct: 230 GLC 232
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ + + AL F + +P N ++E + +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVEDG 520
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+DLF S GV PN +Y MM FC G A LF +M E G +PD +Y L++
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA + DM + P++V + L+ + FD+ + M + G S + LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
FC ++ A VL +++K G P T ++ C G + ++ ++V++ +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 444 GDT 446
D+
Sbjct: 184 PDS 186
>gi|326493764|dbj|BAJ85344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F +A RQ FRH + L L A + D + ++S PV+ T L++++
Sbjct: 149 FHWAGRQKGFRHCFPAFHALACLLSAAGLPAAADQLPDLIRSHGKPVSHPQLTLLVRLHT 208
Query: 142 ESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ P RAL T R EF+ +P NR+L L T Y+ A LF + G+ P
Sbjct: 209 AARRPLRALYTLRRFRHEFSVQPQVHVCNRVLGAL-TAAGYVEDALKLFDEMAESGIRPM 267
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
S+ I++RA G + +M + PDV Y L++ + R+ + + + E
Sbjct: 268 PVSFAIIVRALGQEGKPERILEMIGRMRDEVCRPDVFVYTTLVKTMVRRGHMEGCIRVWE 327
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M G PD+++Y T++ LC + +A KL M+ KG D + Y ++V G+ G
Sbjct: 328 EMGRDGVEPDSMAYATMVEGLCNAGMVEKAAKLFEGMRKKGLLVDRIVYASLVHGYVAAG 387
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R D C+VL+DM G +L +Y L+GGLC G+ D A K Q+++ + P
Sbjct: 388 RVGDGCRVLKDMVDAGYRADLKTYNILIGGLCGIGLEDKAHKMFQIVLQEDLVPSAETVS 447
Query: 381 ALIKGFCNVGKVDEACGVLEELLK 404
L+ + + G + G++++L++
Sbjct: 448 QLLVCYADNGDMVNFFGLVDKLVE 471
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P + +Y++M+ F G+I A + +N M + +P + +YR L++GLC+ ++N AV L
Sbjct: 546 PESCTYSLMIPCFVDEGNIEEACSCYNSMMKAEWIPSLSAYRSLVKGLCKIGEINAAVSL 605
Query: 259 LEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ D L N P Y + CR K K++ M G + + ++ V+ GFC
Sbjct: 606 VSDCLGNVENGPMEFKYALTVIEACRSKDPERVMKVVVEMIELGYLVEELIFSAVIYGFC 665
Query: 318 REGRAIDACKVLEDMPSNGCL--PNLVSYRTLV 348
+ + A +V M + N + Y ++
Sbjct: 666 KYATSTGAREVFSVMADRDIISEANFIVYEDML 698
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 4/178 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F+ + ++P+ ++ + ++ + NGD+ + L +K+ E +P VE ++
Sbjct: 427 AHKMFQIVLQEDLVPSAETVSQLLVCYADNGDMVNFFGLVDKLVELS-LPAVEFLVDFLR 485
Query: 245 GLCRKSQVN-RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK-VKGC 302
K +AV++ + + KG+ Y L+ +L + K+ +A L MK C
Sbjct: 486 LFASKDGRELKAVEVFKTLRQKGYCSVNF-YNILIENLLKIKEREKALLLFEEMKDSDDC 544
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
P+ Y+ ++ F EG +AC M +P+L +YR+LV GLC G + A
Sbjct: 545 EPESCTYSLMIPCFVDEGNIEEACSCYNSMMKAEWIPSLSAYRSLVKGLCKIGEINAA 602
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILM 243
A ++FK+ + G + YNI++ + A LF +M + P+ +Y +++
Sbjct: 497 AVEVFKTLRQKGYC-SVNFYNILIENLLKIKEREKALLLFEEMKDSDDCEPESCTYSLMI 555
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL--CRMKVKG 301
+ + A M+ ++P +Y +L+ LC+ ++ A L+ C V+
Sbjct: 556 PCFVDEGNIEEACSCYNSMMKAEWIPSLSAYRSLVKGLCKIGEINAAVSLVSDCLGNVEN 615
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P Y V+ CR KV+ +M G L + + ++ G C A+
Sbjct: 616 -GPMEFKYALTVIEACRSKDPERVMKVVVEMIELGYLVEELIFSAVIYGFCKYATSTGAR 674
Query: 362 KYMQLMISK 370
+ +M +
Sbjct: 675 EVFSVMADR 683
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 139/270 (51%), Gaps = 1/270 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +L+ P +Q N ++ ++ L A ++F + GV P ++N +M C
Sbjct: 102 YLHLLDAGVPPEARQFNMLMRDMI-RSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMC 160
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
D++ A L M + G+ PDV +Y +QGLC+ ++ A+++ E+M +G P+T+
Sbjct: 161 KASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTV 220
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
TTL+++ C++ + +L M +G D+V YN +V GFCR A ++E+M
Sbjct: 221 VLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM 280
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G P+ V+Y TL+ G C +G D A + Q M +G + ALI G G+
Sbjct: 281 RKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRS 340
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+A +L E+++AG P T+ M++ C
Sbjct: 341 VDAERILCEMMEAGLQPDNTTYTMVIDAFC 370
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 129/241 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A ++F+ + G+ PNT ++ A C GD++ L +M RGV D+ +Y
Sbjct: 200 IQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNA 259
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CR + A D++E+M G PD ++YTTL++ C++ +L A ++ M +G
Sbjct: 260 LVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEG 319
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G + GR++DA ++L +M G P+ +Y ++ C G
Sbjct: 320 VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGF 379
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+++ M +KG +P + ++ GFC++G++ A +L +L G P++ T+ +++
Sbjct: 380 KHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGH 439
Query: 422 C 422
C
Sbjct: 440 C 440
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P ++TY I+ ++ A++ F M E P L +++ + +
Sbjct: 180 IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD-VTAG 238
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L GV + +YN ++ FC D+ A + +M + G+ PD +Y L+ G
Sbjct: 239 LELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDG 298
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ +++ A+++ ++M ++G D ++YT L++ L + + +A ++LC M G PD
Sbjct: 299 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPD 358
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y V+ FC+ G K L++M + G P +V+Y ++ G C G A +
Sbjct: 359 NTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLN 418
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKV 392
M++ G P+ + L+ G C GKV
Sbjct: 419 AMLNIGVCPNDITYNILLDGHCKHGKV 445
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 12/226 (5%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
CRV+ + A+ + +E+ R+ + TY LI + ++ +
Sbjct: 265 CRVRDMKAAND---IVEEM-----RKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMS 316
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
E + +T LI +++ A + M+E +P +++ + + +
Sbjct: 317 DEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD-V 375
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ F K G P +YN++M FC G + A L N M GV P+ +Y IL
Sbjct: 376 KTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 435
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ G C+ +V +L KG V D YT+L+N +KK +
Sbjct: 436 LDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVKKKSAK 478
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ FTY ++ +S AL R M KP I++ L L A
Sbjct: 228 PNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKD-GRLDDALS 286
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
F G+ N +YN ++ +FC G L M R + P+V ++ L+ L
Sbjct: 287 FFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLV 346
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A DL +M+ +G P+T++Y +L+ LC K+L EA +++ M KGC+PDI
Sbjct: 347 KEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIW 406
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ GFC+ + D ++ M G + + V+Y TL+ G C VAKK Q M
Sbjct: 407 TYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEM 466
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S+G P L+ G C+ G+++EA G+L+++ K + +I+ +C ++
Sbjct: 467 VSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKV 526
Query: 428 E 428
+
Sbjct: 527 D 527
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 149/302 (49%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+SML +PLP NR+ LL + Y L K G+ + +
Sbjct: 72 DDAVALFQSMLR--SRPLPTVIDFNRLFGLLARTKQY-DLVLALCKQMELKGIAYDLYTL 128
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC + A++ K+F+ G P+ ++ L+ GLC + +V AV+L++ M+
Sbjct: 129 NIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVL 188
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
VPD ++ T++N LC K ++ EA L+ RM GC P+ Y ++ C+ G
Sbjct: 189 SQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P++V+Y ++ LC G D A + M +KG + ++LI
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
FC+ G+ D+ +L +++ P+ T+ ++ + ++ + ++ NE++ I+
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368
Query: 445 DT 446
+T
Sbjct: 369 NT 370
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 165/341 (48%), Gaps = 2/341 (0%)
Query: 108 AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
+ F ++ + + S+H P +L T + + + + + A+ M+ C+P
Sbjct: 174 GRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSE-AVDLIARMMANGCQPNQFT 232
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
IL + N A DL + + P+ +Y I++ C +G + A + F++M
Sbjct: 233 YGPILNRMCKSGNT-ASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+G+ +V +Y L+ C + + LL DM+ + P+ ++++ L++SL ++ KL
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA L M +G P+ + YN+++ G C + R +A ++++ M S GC P++ +Y L
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNIL 411
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C D + + M +G LI+GFC K+ A V +E++ G
Sbjct: 412 INGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
P T+ +++ +C E+E+ +L+++ K +++ D I
Sbjct: 472 HPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 3/303 (0%)
Query: 122 KSEHYPVTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K EH + P + TY I I + D AL F M K N ++ +
Sbjct: 255 KMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFG 314
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A L + + PN +++ ++ + G ++ A L+N+M RG+ P+ +Y
Sbjct: 315 RWDDGA-QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC +++ A +++ M++KG PD +Y L+N C+ K++ + +L +M +
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G D V Y+T++ GFC+ + I A KV ++M S G P +++Y L+ GLCD G +
Sbjct: 434 RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEE 493
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M + + +I G CN KVD+A + L G ++ +++
Sbjct: 494 ALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLS 553
Query: 420 QIC 422
+C
Sbjct: 554 GLC 556
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 158/356 (44%), Gaps = 5/356 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY I+I L K L D + + E + ++FTY LI + D + R
Sbjct: 267 TYTIIIDNL--CKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P + +++ LV L A DL+ G+ PNT +YN ++ C +
Sbjct: 325 DMITRKITPNVVTFSALIDSLV-KEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCND 383
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + + M +G PD+ +Y IL+ G C+ QV+ + L M +G + DT++Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+TL+ C+ +KL A K+ M +G +P I+ Y ++ G C G +A +L+ M
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
++ Y ++ G+C+ D A + SKG + ++ G C + E
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
A + ++ + G P T+ ++ G ++ +++ E+ + D V+
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVK 619
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 3/300 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP++ T+ LI + A + M+ +P N ++ L + L A
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR-LDEA 389
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G P+ +YNI++ FC + LF KM RG++ D +Y L+QG
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++ A + ++M+++G P ++Y LL+ LC +L EA +L +M D
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C + DA + +PS G ++ SY ++ GLC + A +
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFR 569
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G+ P + LI+ + + ++EE+ + G + T +++ + +GE
Sbjct: 570 KMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGE 629
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF M +P V + L L R Q + + L + M KG D + ++N
Sbjct: 74 AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR++KL A+ + ++ G P+ V +NT++ G C EGR +A ++++ M + +P
Sbjct: 134 CFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L++ T+V GLC + A + M++ G P+ ++ C G A +L
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYL 459
++ PH T+ +I+ +C +L + L+ ++E KG ++A + + L
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKD---GRLDDALSFFSEMETKG----IKANVFTYNSL 306
Query: 460 IG 461
IG
Sbjct: 307 IG 308
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 150/295 (50%), Gaps = 11/295 (3%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF- 186
P + TY L+ ++ A K F M+ KP N + ++ H R A
Sbjct: 372 PDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP-----NVTIYGILLHGYAARGAIA 426
Query: 187 ---DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
DL +G+ PN +NI++ A+ I A +F++M + G+ PDV +Y IL+
Sbjct: 427 DLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILI 486
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV M+N G P+++ + +L+ LC + +A +L M +G
Sbjct: 487 DALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVR 546
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V +NT++ C EG+ + A ++++ M G PN++SY TL+GG C G D A +
Sbjct: 547 PNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQL 606
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +M+S G P L++G+C G++D A + E+L+ G P T+ I+
Sbjct: 607 LDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 162/337 (48%), Gaps = 9/337 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P L TY L + + F +L+ + +N++L L +
Sbjct: 86 VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG---VMPDVESYRIL 242
L + + G +PN S N +++ C + A L + M E G P+V +Y +
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ V+RA +L+ M++KG D ++Y+T+++ LC+ + + A +L M KG
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265
Query: 303 NPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V YNT++ G C+ +A+D A VL+ M G P++V+Y T++ GLC D A
Sbjct: 266 KPDVVTYNTIIDGLCK-AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Q MI K P + LI G+ + G+ E LEE+ G P T+ +++ +
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
C + + ++ +++ IK + I GI L Y
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIY--GILLHGY 419
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 176/373 (47%), Gaps = 17/373 (4%)
Query: 77 LAKEIFDYASR--QPNFRHSNSTYLIL---ILKLGRAKY-FSLIDDILITLKSEHYPVTP 130
LA +F+ +R R TY IL +LGR ++ F+ IL T + V
Sbjct: 70 LAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKT----GWRVNE 125
Query: 131 SLFTYLIKIYAESNLPDRALKTF-RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
+ L+ ++ D A+ R M EF C P N +L+ L + + A +L
Sbjct: 126 VVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKR-VEEALELL 184
Query: 190 KSAHKHG---VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G PN +YN ++ C + A + M ++GV DV +Y ++ GL
Sbjct: 185 HTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGL 244
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ V+RA +L+ M++KG PD ++Y T+++ LC+ + + A +L M KG PD+
Sbjct: 245 CKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 304
Query: 307 VHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V YNT++ G C+ +A+D A VL+ M P++ +Y L+ G G + + ++
Sbjct: 305 VTYNTIIDGLCK-AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M ++G P L+ C GK EA + +++ G P+ + +++ A
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423
Query: 426 EMEKLGEVLNEIV 438
+ L ++L+ +V
Sbjct: 424 AIADLTDLLDLMV 436
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 128/238 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F +HG+ P+ +Y I++ A C G + A FN+M GV P+ + L+
Sbjct: 463 AMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVY 522
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + +A +L +M ++G P+ + + T++ +LC + ++ A +L+ M+ G P
Sbjct: 523 GLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ YNT++ G C GR +A ++L+ M S G P+L+SY TL+ G C G D A
Sbjct: 583 NVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLF 642
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+ KG +P +++G + + EA + ++K+G+ T+ +I+ +C
Sbjct: 643 REMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
Query: 147 DRALKTFRSMLE---FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
+ AL+ +M E NC P N I++ L + R A + + GV + +
Sbjct: 178 EEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDR-AEGVLQHMIDKGVKLDVVT 236
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y+ ++ C + A + M ++GV PDV +Y ++ GLC+ V+RA +L+ M+
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI 296
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+KG PD ++Y T+++ LC+ + + A +L M K PDI YN ++ G+ G
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK 356
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+ + LE+M + G P++V+Y L+ LC G A+K MI KG P+ ++ L+
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPH 410
G+ G + + +L+ ++ G +P+
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPN 443
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 154/320 (48%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY +I ++ DRA + M++ + KP + N ++ ++ + +
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW-KEV 358
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + G+ P+ +Y++++ C NG + A +F M +G+ P+V Y IL+ G
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + DLL+ M+ G P+ + +L + +K + EA + RM G +PD
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y ++ C+ GR DA M ++G PN V + +LV GLC ++ A++
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G P+ + ++ CN G+V A +++ + + G P+ ++ ++ C
Sbjct: 539 EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAG 598
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
++ ++L+ +V V +K D
Sbjct: 599 RTDEAAQLLDVMVSVGLKPD 618
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 1/341 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I L +A+ + +L + + + ++ +I ++ DRA + M
Sbjct: 201 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHM 260
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
++ KP N I++ L + R A + + GV P+ +YN ++ C
Sbjct: 261 IDKGVKPDVVTYNTIIDGLCKAQAVDR-AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A + M ++ V PD+++Y L+ G + V LE+M +G PD ++Y+
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL+ LC+ K EA K+ M KG P++ Y ++ G+ G D +L+ M +NG
Sbjct: 380 LLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PN + ++ + M D A M G SP LI C +G+VD+A
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+++ G P+ + +V +C + EK E+ E+
Sbjct: 500 LKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 155/347 (44%), Gaps = 2/347 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A++IF Y + + + + Y IL+ + + D+L + + +F ++
Sbjct: 393 ARKIF-YCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
YA+ + D A+ F M + P +++ L + A F GV
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL-CKLGRVDDAVLKFNQMINDGV 510
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN+ +N ++ C A LF +M+++GV P+V + +M LC + QV A
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L++ M G P+ +SY TL+ C + EA +LL M G PD++ Y+T++ G+C
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ GR +A + +M G P V+Y T++ GL F AK+ MI G
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ ++ G C VDEA + + L P+ T+ +++ + G
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKG 737
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 148/330 (44%), Gaps = 3/330 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--DRALK 151
S + Y+ I+ AK + + + I + + ++P + TY I I A L D A+
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
F M+ P N ++ L T + A +LF GV PN +N +M
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRW-EKAEELFFEMWDQGVRPNVVFFNTIMCNL 559
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G + +A L + M GV P+V SY L+ G C + + A LL+ M++ G PD
Sbjct: 560 CNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDL 619
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SY TLL C+ ++ AY L M KG P V Y+T++ G R +A ++ +
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M +G ++ +Y ++ GLC D A K Q + SK P+ +I G+
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+A + + G P+ T+ +++ I
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNI 769
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 13/347 (3%)
Query: 97 TYLILI---LKLGRAKYFSLIDDILITLKSE-HYPVTPS--LFTYLIKIYAESNLPDRAL 150
TY ILI KLGR +DD ++ + VTP+ +F L+ + ++A
Sbjct: 481 TYGILIDALCKLGR------VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAE 534
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ F M + +P N I+ L + A L S + GV PN SYN ++
Sbjct: 535 ELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM-VAQRLIDSMERVGVRPNVISYNTLIGG 593
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G A L + M G+ PD+ SY L++G C+ +++ A L +ML KG P
Sbjct: 594 HCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPG 653
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+T+L L ++ EA +L M G DI YN ++ G C+ +A K+ +
Sbjct: 654 AVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQ 713
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ S PN++++ ++ L G A + S G P+ ++K G
Sbjct: 714 SLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEG 773
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+DE + + K+G P I+ + E+ + G L++I
Sbjct: 774 LLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 13/270 (4%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E V P++ +Y LI + + D A + M+ KP + +L R Y
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL------RGY 629
Query: 182 LRP-----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ A+ LF+ + GV P +Y+ +++ S A L+ M + G D+
Sbjct: 630 CKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDI 689
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y I++ GLC+ + V+ A + + + +K P+ +++T +++ L + + ++A L
Sbjct: 690 YTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFAS 749
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ G P++V Y ++ +EG + + M +GC P+ V ++ L +G
Sbjct: 750 IPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGE 809
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
A Y+ + FS S + LI F
Sbjct: 810 IMRAGAYLSKIDEMNFSLEASTTSLLISLF 839
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 2/198 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L + FS ++ + + + ++ ++N D A K F+S+
Sbjct: 656 TYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL 715
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +P ++++L + A DLF S HG++PN +Y IMM+ G
Sbjct: 716 CSKDLRPNIITFTIMIDVLFKGGRK-KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGL 774
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ LF M + G PD +++ L + ++ RA L + F + S T+
Sbjct: 775 LDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEA-STTS 833
Query: 277 LLNSLCRKKKLREAYKLL 294
LL SL +++ + K L
Sbjct: 834 LLISLFSREEYKNHAKSL 851
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 4/294 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILEL-LVTHRNYLRPAFDLFKSAHKH-GVLPNTKSY 204
D AL F +M + N PLP ++ L L + + A L K H G+ P+T
Sbjct: 57 DEALNFFHTMAKMN--PLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFIL 114
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N+++ + C ++ +++ M + G+ P V ++ IL+ GLC K V RAV+L++ +
Sbjct: 115 NVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEK 174
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ D +Y L+N LC+ K EA L +M+ + NP++V Y+TV+ G C++G +
Sbjct: 175 TGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSE 234
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + +M G PNLV+Y L+ GLC+ G + A + M+ G P + L+
Sbjct: 235 ALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVD 294
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
C GK+ +A V+ ++ GE P T+ ++ + C +M++ V +V
Sbjct: 295 VLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L K G + K+Y +++ C G S A KM ER P+V Y +M
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ V+ A+ L +M KG P+ ++YT L+ LC + +EA LL M G P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ N +V C+EG+ + A V+ M G +P++ +Y +L+ C Q D A +
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-- 422
+LM+S+G P +LI G+C + +++A +L+E++K G P TW ++ C
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQV 404
Query: 423 ----AGEE----MEKLGEVLN 435
A +E M K G+V N
Sbjct: 405 GRPLAAKELFLNMHKYGQVPN 425
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
KP LN ++ L H + F + + K G+ P+ ++ I++ C GD+ A
Sbjct: 108 KPDTFILNVVINSLC-HLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAV 166
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L + + + G DV++Y +L+ GLC+ + + AV L M + + P+ + Y+T+++ L
Sbjct: 167 ELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGL 226
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + EA L M KG P++V Y ++ G C GR +A +L++M G +P+L
Sbjct: 227 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDL 286
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
S LV LC +G AK + MI G P ++LI +C ++DEA V E
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ G P + ++ C + + K +L+E++KV D IG
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIG 399
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 123/227 (54%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN Y+ +M C +G +S A L +M +G+ P++ +Y L+QGLC + A L
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++M+ G +PD S L++ LC++ K+ +A ++ M + G PD+ YN+++ +C
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ + +A +V E M S GCLP++V+Y +L+ G C + A + MI GF+P
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
LI GFC VG+ A + + K G+ P+ T +I+ +C +
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQ 440
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 1/288 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+ R M E N P + +++ L + A L G+ PN +Y +
Sbjct: 199 EAVGWLRKMEERNWNPNVVVYSTVMDGLC-KDGLVSEALGLCLEMSGKGIKPNLVTYTCL 257
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++ C G A +L ++M + GVMPD++S IL+ LC++ ++ +A ++ M+ G
Sbjct: 258 IQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGE 317
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD +Y +L++ C + ++ EA ++ M +GC PDIV Y +++ G+C+ A
Sbjct: 318 VPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMH 377
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L++M G P++V++ TL+GG C G AK+ M G P+ ++ G C
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ EA + + K+ + + +I+ +C+ ++ E+ +
Sbjct: 438 KSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 150/318 (47%), Gaps = 2/318 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+ D+ + +R TY +LI L + S L ++ ++ +++ ++
Sbjct: 165 AVELVDHVEKT-GYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVM 223
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ L AL M KP +++ L + + A L K GV
Sbjct: 224 DGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRW-KEAGSLLDEMMKMGV 282
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P+ +S NI++ C G I A ++ M G +PDV +Y L+ C ++Q++ A
Sbjct: 283 MPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATR 342
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ E M+++G +PD ++YT+L++ C+ K + +A LL M G PD+V + T++ GFC
Sbjct: 343 VFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFC 402
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ GR + A ++ +M G +PNL + ++ GLC + A M +
Sbjct: 403 QVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIV 462
Query: 378 VSHALIKGFCNVGKVDEA 395
+ ++ G C+ GK++ A
Sbjct: 463 IYSIILDGMCSAGKLNTA 480
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 139/304 (45%), Gaps = 3/304 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+L TY I N A M++ P + LN ++++L ++ A
Sbjct: 247 IKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQ-A 305
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G +P+ +YN ++ +C + A +F M RG +PD+ +Y L+ G
Sbjct: 306 KSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHG 365
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +N+A+ LL++M+ GF PD +++TTL+ C+ + A +L M G P+
Sbjct: 366 WCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ ++ G C+ +A + M + N+V Y ++ G+C G + A +
Sbjct: 426 LQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ +KG + +I GF G +D+A +L + + G P T+ + V + A
Sbjct: 486 CLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAER 545
Query: 426 EMEK 429
E+ +
Sbjct: 546 EIAR 549
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 1/287 (0%)
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
N+ D A+ F ML + P + IL L ++Y A L K G+ PN
Sbjct: 30 DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHY-STAISLSKQMEVKGIEPNLV 88
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+ NI++ FC G +S ++++ K+ + G P+ + LM+GLC K +V ++V + +
Sbjct: 89 TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ +GF + +SY TLLN LC+ + R A K L ++ ++V YNT++ G C++
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +M + G PN+++Y TL+GG C G A + MI K +P+ L
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAIL 268
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
I C GKV EA +L E+ G+ T+ ++ C + ++K
Sbjct: 269 IDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDK 315
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 121/225 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A+D + + G+ PN +Y ++ FC G ++ A++L N+M + + P+V +Y I
Sbjct: 208 VNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAI 267
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC++ +V A +LL +M +G D ++YT+LL+ C+ + L +A L +MK G
Sbjct: 268 LIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG 327
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ Y ++ G C+ GR DA K+ +D+ GC ++ +Y ++GGLC +GM D A
Sbjct: 328 IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEAL 387
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M G P+ +I+ + D+A +L E++ G
Sbjct: 388 AIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 124/239 (51%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N YN ++ C + ++ AY +++M RG+ P+V +Y L+ G C Q+ A LL
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+M+ K P+ +Y L+++LC++ K++EA LL M +G D+V Y +++ GFC+
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKN 310
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
A + M G PN +Y L+ GLC G A+K Q ++ KG
Sbjct: 311 QNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTY 370
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ +I G C G +DEA + ++ G P+ T+ +I+ + +E +K ++L+E++
Sbjct: 371 NVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMI 429
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 190 KSAHKH------GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
KS H H G N SY ++ C G+ A + + +V Y ++
Sbjct: 140 KSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTII 199
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ VN A D +M +G P+ ++YTTL+ C +L A+ LL M +K N
Sbjct: 200 DGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN 259
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ Y ++ C+EG+ +A +L +M G ++V+Y +L+ G C D A
Sbjct: 260 PNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATAL 319
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G P+ ALI G C G++ +A + ++LL G T+ +++ +C
Sbjct: 320 FMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLC 378
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 114/220 (51%)
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
S A +L +M +G+ P++ + IL+ C Q++ + +L +L G+ P+T++ TTL
Sbjct: 69 STAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTL 128
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ LC K +++++ ++ +G + V Y T++ G C+ G A K L + +
Sbjct: 129 MKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSST 188
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
N+V Y T++ GLC + + A + M ++G P+ LI GFC G++ A
Sbjct: 189 GLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFS 248
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+L E++ P+ T+ +++ +C ++++ +L E+
Sbjct: 249 LLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEM 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +L H G + +Y ++ FC N ++ A LF KM E G+ P+ +Y
Sbjct: 278 VKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTA 337
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A L +D+L KG D +Y ++ LC++ L EA + +M+ G
Sbjct: 338 LIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNG 397
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C P++V + ++ ++ A K+L +M + G L
Sbjct: 398 CIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + FN M P + + ++ L + + A+ L + M KG P+ ++ L+N
Sbjct: 36 AISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILIN 95
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ ++ +L ++ G P+ + T++ G C +G + + + + G
Sbjct: 96 CFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQM 155
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N VSY TL+ GLC G A K+++++ + + + +I G C V+EA
Sbjct: 156 NQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFY 215
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
E+ G P+ T+ ++ C ++ +LNE++
Sbjct: 216 SEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMI 254
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 36/205 (17%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI L + ++L + HY P+ + T+ S+
Sbjct: 264 TYAILIDALCKEGKVKEAKNLLAEM---HYRGQPA-----------------DVVTYTSL 303
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L+ CK L A LF + G+ PN +Y ++ C G
Sbjct: 304 LDGFCK----------------NQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGR 347
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A LF + +G DV +Y +++ GLC++ ++ A+ + M + G +P+ +++
Sbjct: 348 LKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEI 407
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKG 301
++ SL +K + +A KLL M KG
Sbjct: 408 IIRSLFKKDENDKAEKLLHEMIAKG 432
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 170/341 (49%), Gaps = 15/341 (4%)
Query: 107 RAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
R ++ S+I + + L H+ P+L + A+ +F ML P
Sbjct: 5 RFRFHSIIPNSTLLLSHTHFHSLPNL--------------NDAIDSFNRMLRMRPPPPII 50
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+ +IL LV ++Y LF+ HG+ N + NI++ ++C I+ A+++F K
Sbjct: 51 KFGKILGSLVKTKHY-PIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAK 109
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ + G PD+ +Y L++GLC QV +++ + ++++G D +SY TL+N LC+ +
Sbjct: 110 ILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQ 169
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
A +LL +++ + C PD+V YNT++ G C++ DA + +M PN+V+Y +
Sbjct: 170 TGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTS 229
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C G D A + M+ K +P+ + L+ G C GK+ EA ++ ++K G
Sbjct: 230 LIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEG 289
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
P T+ ++ +E K V N + ++ + D
Sbjct: 290 VGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH 330
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 154/324 (47%), Gaps = 6/324 (1%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY IY + D+A M+ N P N +++ L +R A
Sbjct: 220 VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL-CKEGKMREA 278
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K GV P+ +YN +M + + A +FN M + GV DV SY +++ G
Sbjct: 279 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 338
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + ++ A+DL E M N+ +PD ++Y++L++ LC+ ++ A K + M +G P+
Sbjct: 339 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPN 398
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y +++ C+ + A +L+ + G N+ +Y LV GLC G A+K Q
Sbjct: 399 VITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQ 458
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG + +I G C DEA +L ++ G P + I+ +
Sbjct: 459 DLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKD 518
Query: 426 EMEKLGEVLNEIVK-VEIK--GDT 446
+K ++L E++ V+ K GDT
Sbjct: 519 MNDKAEKLLREMIDCVDYKDNGDT 542
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL+ R + C+P N I++ L + +R AFDL+ + V PN +Y ++
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDK-LVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A+ L N+M + V P+V ++ L+ GLC++ ++ A L+ M+ +G
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +Y L++ K+ +A + M G D+ Y+ ++ G + +A +
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
E M + +P++V+Y +L+ GLC G + A KY+ M +G P+ +LI C
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+VD+A +L+++ G + T+ ++V +C + +V +++
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLL 461
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PA L + P+ YN ++ C + + A+ L+ +MFE+ V P+V +Y L+
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C Q+++A LL +M+ K P+ ++ TL++ LC++ K+REA L+ M +G
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+ YN ++ G+ A A V M G ++ SY ++ GL M D A
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M ++ P +LI G C G+++ A ++E+ G+ P+ T+ ++ +C
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411
Query: 424 GEEMEKLGEVLNEI 437
+++K +L +I
Sbjct: 412 SHQVDKAIALLKKI 425
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 139/270 (51%), Gaps = 1/270 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +L+ P +Q N ++ ++ L A ++F + GV P ++N +M C
Sbjct: 230 YLHLLDAGVPPEARQFNMLMRDMI-RSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMC 288
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
D++ A L M + G+ PDV +Y +QGLC+ ++ A+++ E+M +G P+T+
Sbjct: 289 KASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTV 348
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
TTL+++ C++ + +L M +G D+V YN +V GFCR A ++E+M
Sbjct: 349 VLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM 408
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G P+ V+Y TL+ G C +G D A + Q M +G + ALI G G+
Sbjct: 409 RKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRS 468
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+A +L E+++AG P T+ M++ C
Sbjct: 469 VDAERILCEMMEAGLQPDNTTYTMVIDAFC 498
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 129/241 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A ++F+ + G+ PNT ++ A C GD++ L +M RGV D+ +Y
Sbjct: 328 IQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNA 387
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CR + A D++E+M G PD ++YTTL++ C++ +L A ++ M +G
Sbjct: 388 LVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEG 447
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G + GR++DA ++L +M G P+ +Y ++ C G
Sbjct: 448 VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGF 507
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+++ M +KG +P + ++ GFC++G++ A +L +L G P++ T+ +++
Sbjct: 508 KHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGH 567
Query: 422 C 422
C
Sbjct: 568 C 568
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 133/280 (47%), Gaps = 7/280 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P ++TY I+ ++ A++ F M E P L +++ + +
Sbjct: 308 IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD-VTAG 366
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L GV + +YN ++ FC D+ A + +M + G+ PD +Y L+ G
Sbjct: 367 LELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDG 426
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ +++ A+++ ++M ++G D ++YT L++ L + + +A ++LC M G PD
Sbjct: 427 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPD 486
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y V+ FC+ G K L++M + G P +V+Y ++ G C G A +
Sbjct: 487 NTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLN 546
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
M++ G P+ + L+ G C GKV + EEL A
Sbjct: 547 AMLNIGVCPNDITYNILLDGHCKHGKVRDT----EELKSA 582
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 12/226 (5%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
CRV+ + A+ + +E+ R+ + TY LI + ++ +
Sbjct: 393 CRVRDMKAAND---IVEEM-----RKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMS 444
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
E + +T LI +++ A + M+E +P +++ + + +
Sbjct: 445 DEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD-V 503
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ F K G P +YN++M FC G + A L N M GV P+ +Y IL
Sbjct: 504 KTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 563
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ G C+ +V D E KG V D YT+L+N +KK +
Sbjct: 564 LDGHCKHGKVR---DTEELKSAKGMVSDFGVYTSLINEFVKKKSAK 606
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLV-THRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+ A + F M +F P P+ N +L L R L F FK G+ + +YN
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF--FKDMGAAGIKRSVFTYN 60
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
IM+ C GD+ +A +LF +M E G PD+ +Y L+ G + ++ + + E M +
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD ++Y L+N C+ +++ +A++ L MK G P++V Y+T + FC+EG +A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
K DM PN +Y +L+ C G A K ++ ++ G + AL+ G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
C G++ EA V +L AG AP+++T+ +V +EME ++L E+ + IK D
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + F K V P +S N ++ G ++ F M G+ V +Y I
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ LC++ + A L M GF PD ++Y +L++ + L E + +MK
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+PD++ YN ++ FC+ R A + L +M +NG PN+V+Y T + C +GM A
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K+ M +P+ +LI C G + EA ++EE+L+AG + T+ ++ +
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C M++ EV ++ +
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGV 262
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 26/337 (7%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY I + + + A+K F M P +++ N L A
Sbjct: 157 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN-LAEA 215
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + G+ N +Y ++ C G + A +F M GV P+ E+Y L+ G
Sbjct: 216 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 275
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ ++ A D+L++M K PD L Y T+L LC + +L EA L+ +K G N +
Sbjct: 276 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 335
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPS-----------------------NGCLPNLV 342
V Y T++ + + G+A +A +LE+M G +P+ +
Sbjct: 336 AVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 395
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y L+ G G A MI G ALI G + G+V +A +L+E+
Sbjct: 396 AYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 455
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ G P E ++ ++ + A ++++ E+ NE+ K
Sbjct: 456 IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 492
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 5/317 (1%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLP 146
+ S TY I+I L + + + +K + TP + TY LI + + L
Sbjct: 50 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGF--TPDIVTYNSLIDGHGKLGLL 107
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D + F M + +C P N ++ + AF+ +G+ PN +Y+
Sbjct: 108 DECICIFEQMKDADCDPDVITYNALINCFCKFER-MPKAFEFLHEMKANGLKPNVVTYST 166
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
+ AFC G + A F M + P+ +Y L+ C+ + A+ L+E++L G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ ++YT LL+ LC + +++EA ++ M G P+ Y +V GF + A
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+L++M P+L+ Y T++ GLC++ + AK + + G + + + L+ +
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346
Query: 387 CNVGKVDEACGVLEELL 403
G+ EA +LEE+L
Sbjct: 347 FKSGQATEALTLLEEML 363
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN ++ FC + A+ ++M G+ P+V +Y + C++ + A+
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
DM P+ +YT+L+++ C+ L EA KL+ + G ++V Y ++ G C
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EGR +A +V M + G PN +Y LV G + AK ++ M K P +
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAG 406
++ G CN +++EA ++ E+ ++G
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEIKESG 331
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 26/305 (8%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+TP+ FTY LI ++ ALK +L+ K +L+ L ++
Sbjct: 191 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLC-EEGRMKE 249
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++F++ GV PN ++Y ++ F ++ A + +M E+ + PD+ Y ++
Sbjct: 250 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 309
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS-----------------------L 281
GLC +S++ A L+ ++ G + + YTTL+++ L
Sbjct: 310 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGL 369
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ A KL M KG PD + Y ++ G + G +A + + M G +L
Sbjct: 370 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 429
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+Y L+ GL G A+ + MI KG P V LIK + +GKVDEA + E
Sbjct: 430 HAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNE 489
Query: 402 LLKAG 406
+ K G
Sbjct: 490 MAKRG 494
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
FKS L + ++ C N +A LF++M ++G+MPD +Y L+ G +
Sbjct: 347 FKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 406
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ A++L + M+ G D +YT L+ L ++++A LL M KG PD V
Sbjct: 407 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 466
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
Y ++ + G+ +A ++ +M G + L +
Sbjct: 467 YMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 502
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ ++N + A K F ML+ P +++ + H N L+ A +L +
Sbjct: 365 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN-LQEALNLRDRMIEI 423
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ + +Y ++ +G + A L ++M +GV+PD Y L++ +V+ A
Sbjct: 424 GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 483
Query: 256 VDLLEDMLNKGFV 268
++L +M +G +
Sbjct: 484 LELQNEMAKRGMI 496
>gi|255539453|ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549906|gb|EEF51393.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 475
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 9/338 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L + F ++S+Q N+RH+ + Y +++ + F + +L + +P T F L
Sbjct: 136 LGYKFFIWSSQQENYRHTANNYHLIMKIFADCEEFKAMWRLLDEMVENGFPTTARTFNIL 195
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH- 195
I + L + ++ F FN +P N IL L+ R Y L + H+
Sbjct: 196 ICTCGGAGLARKVVERFIKSKTFNYRPFKHSYNAILLSLLAIREY-----KLIEWVHQQM 250
Query: 196 ---GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P+T +YNI+M A G + + L ++M G PD +Y IL+ L + ++
Sbjct: 251 LVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILLHVLGKGNKP 310
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ LL M GF P L +TTL++ L R L M G PD+V Y +
Sbjct: 311 IAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNGFVPDVVCYTVM 370
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ G A ++ ++M + G LPN+ +Y +++ GLC G F+ A+ ++ M S+G
Sbjct: 371 ITGYIVAGELEKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEARCMLKEMGSRGC 430
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
P+F V + L+ N GK+ EA V++E+ + G+ H
Sbjct: 431 KPNFLVYNTLVNNLRNAGKLSEAREVIKEMAENGQYVH 468
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI+ Y E + AL+ M NC+P + N ++ + R ++ A
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI-CGFSKRKHVHKA 443
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + P+ +YN ++ C G AY L + + E G++PD +Y + +
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A DL + KG + + YT L++ C+ K+ EA LL RM + C P+
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN+++ G C+EG+ + ++E+M G P + +Y L+ + +G FD A +
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFN 623
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P A I +C G V EA G++ +++AG P T+ +++
Sbjct: 624 QMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLI 676
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 150/356 (42%), Gaps = 36/356 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T +I E+ D + F+ M E +C P + I+ L + L DLF
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE-GMDLFNEM 345
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC----- 247
+ PN +Y +M+ A C + + + N+M E+G++P V +Y L++G C
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405
Query: 248 ------------------------------RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
++ V++A+ LL ML P ++Y +L
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSL 465
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ C+ AYKLL +K G PD Y+ + C+ R +AC + + G
Sbjct: 466 IHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGI 525
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
N V Y L+ G C G D A ++ M S+ P+ S ++LI G C GKV E
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS 585
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++E + K G P T+ +++ ++ + + V N++V K D A I
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFI 641
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A+ +F G N SY ++ C G I +LF KM E P V +Y
Sbjct: 263 NDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTY 322
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+++ L + +DL +M + P+ +YT +++++C+++KL E+ ++L M
Sbjct: 323 TVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMME 382
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P +V YN ++ G+C EGR A ++L M SN C PN +Y L+ G +
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHK 442
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M+ +P ++LI C G D A +L+ L + G P + T+ + +
Sbjct: 443 AMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFID 502
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+C + ME+ ++ N + + IK + + A I
Sbjct: 503 TLCKSKRMEEACDLFNSLKEKGIKANEVMYTALI 536
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 3/304 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P FTY LI Y +N + A K F M C+ I+ L +
Sbjct: 245 LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC-EAGRIDEG 303
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LFK + P ++Y +++ A N LFN+M ER P+V +Y +++
Sbjct: 304 ISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDA 363
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+C++ +++ + +L +M+ KG VP ++Y L+ C + ++ A ++L M+ C P+
Sbjct: 364 MCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPN 423
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN ++ GF + A +L M + P+LV+Y +L+ C G FD A K +
Sbjct: 424 ERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLD 483
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
L+ G P I C +++EAC + L + G +E + ++ C
Sbjct: 484 LLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAG 543
Query: 426 EMEK 429
++++
Sbjct: 544 KIDE 547
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TPSL TY LI + ++ D A K + E P + ++ L + + A
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR-MEEA 513
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DLF S + G+ N Y ++ C G I A +L +M +P+ +Y L+ G
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+C++ +V + ++E+M G P +YT L+ + R+ A ++ +M G PD
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPD 633
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y + +C G +A ++ M G +P+ ++Y L+ G+ A ++
Sbjct: 634 VYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLK 693
Query: 366 LMISKGFSPHFSVSHALI 383
M+ G P + + LI
Sbjct: 694 RMLDAGCDPSHPIWNNLI 711
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + H LPN+ +YN ++ C G + ++ M + GV P V +Y IL++
Sbjct: 548 AISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE 607
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ R+ + A + M++ G PD +YT +++ C ++EA ++ RM G P
Sbjct: 608 EMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMP 667
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP------NLVSYRT 346
D + Y ++ + R G A DA VL+ M GC P NL+ Y+
Sbjct: 668 DSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIWYKA 715
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 162/313 (51%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY LI + + A+ F M+ N KP N IL ++
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN-ILVNAFCKDGKMKEG 314
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F K G+ PN +YN +M +C +++ A ++FN M + GV PD++SY I++ G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + + A++L ++M K +PD ++Y++L++ L + ++ A +L+ +M +G P
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN+++ C+ + A +L + G PN+ +Y L+ GLC G + A+K +
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG + + +I+GFC G +EA +L ++ G P T+ +I+ + +
Sbjct: 495 GLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Query: 426 EMEKLGEVLNEIV 438
E + ++L E++
Sbjct: 555 ENDMAEKLLREMI 567
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 152/308 (49%), Gaps = 1/308 (0%)
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
+ +N D A+ F +L N P + N+IL LV ++Y L + G+ P
Sbjct: 60 FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHY-HTVLYLSQKMEFRGIKP 118
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N + NI++ FC G I A+++F K+ + G +PD ++ L++GLC K Q+ +A
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFH 178
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ ++ GF D +SY TL++ LC+ + R A LL R+ P++V YNT++ C+
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+A + +M S G P++V+Y L+ G C G + A MI + P
Sbjct: 239 KLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTF 298
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ L+ FC GK+ E V + ++K G P+ T+ ++ C +E+ K + N + +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 440 VEIKGDTR 447
+ D +
Sbjct: 359 GGVNPDIQ 366
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 132/253 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDLF G+ P+ +Y+ ++ FC G ++ A LFNKM + PDV ++ I
Sbjct: 241 VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNI 300
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C+ ++ + + M+ +G P+ ++Y +L++ C K++ +A + M G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
NPDI Y+ ++ GFC+ + +A + ++M +P++V+Y +L+ GL G A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M +G P ++++ C + +VD+A +L +L G P+ T+ +++ +
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Query: 422 CAGEEMEKLGEVL 434
C ++E +V
Sbjct: 481 CQSGKLEDARKVF 493
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 124/255 (48%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A DL + + V PN YN ++ + C ++ A+ LF++M +G+ PDV +Y L
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++N A+DL M+ + PD ++ L+N+ C+ K++E + M +G
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+ V YN+++ G+C A + M G P++ SY ++ G C FD A
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M K P +LI G G++ A +++++ G P T+ I+ +C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALC 446
Query: 423 AGEEMEKLGEVLNEI 437
+++K +L ++
Sbjct: 447 KIHQVDKAIALLTKL 461
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 133/249 (53%), Gaps = 3/249 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY L+ Y ++A F +M + P + + ++ + + A
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF-DEA 384
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LFK H+ ++P+ +Y+ ++ +G IS A L ++M +RGV P + +Y ++
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ QV++A+ LL + +KG P+ +Y+ L+ LC+ KL +A K+ + VKG N +
Sbjct: 445 LCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLN 504
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ GFC EG +A +L M NGC+P+ +Y ++ L + D+A+K ++
Sbjct: 505 VDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLR 564
Query: 366 LMISKGFSP 374
MI++G P
Sbjct: 565 EMIARGVRP 573
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 143/288 (49%), Gaps = 7/288 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLR 183
+ P ++T+ L+ + + F M++ KP N +++ LV N
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN--- 347
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +F + + GV P+ +SY+IM+ FC A LF +M + ++PDV +Y L+
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GL + +++ A+ L++ M ++G P +Y ++L++LC+ ++ +A LL ++K KG
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ Y+ ++ G C+ G+ DA KV E + G N+ +Y ++ G C +G+F+ A
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+ M G P +I + D A +L E++ G P +
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 16/273 (5%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTY--LILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
K +FD +Q PNF NS L+ ++ +AK I T+ V P +
Sbjct: 314 GKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK------SIFNTMAQG--GVNPDI 365
Query: 133 FTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+Y I I + + D A+ F+ M N P + +++ L + + A L
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL-SKSGRISYALQLVD 424
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
H GV P ++YN ++ A C + A L K+ ++G+ P++ +Y IL++GLC+
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ A + E +L KG + +YT ++ C + EA LL +M+ GC PD Y
Sbjct: 485 KLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++L ++ A K+L +M + G P ++
Sbjct: 545 IIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY+ F N D+ A +LFN++ R P + ++ L + + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M +G P+ ++ L+N C+ + A+ + ++ G PD + + T++ G C +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ A + + + G + +SY TL+ GLC G A +Q + P+ +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +I C V V+EA + E++ G +P T+ ++ C ++ ++ N+++
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 440 VEIKGDT 446
IK D
Sbjct: 289 ENIKPDV 295
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 122/221 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ P+ +YN M+ FC +G S A L +M ER + PDV +Y L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y ++++ C++ +L A + M KGC+P
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ + T++ G+C R D ++L +MP G + N V+Y TL+ G C G + A
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
Q MIS G P + L+ G C+ GK+ +A + + + K+
Sbjct: 454 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 494
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K E + ++++ LIK + + AL TF + + P +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L L + + A D F + PN ++ +M C G I A L ++M E G
Sbjct: 156 LHGLCVE-DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREA 290
+ P +Y ++ G+C+K A++LL M +P+ + Y+ +++SLC+ + +A
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M+ KG PD+ YN++++GFC GR DA ++L++M P++V+Y L+
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G F A + M+ +G P+ +++I GFC ++D A + + G +P
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEI 437
T+ ++ C + ++ E+L+E+
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEM 421
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 14/334 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P N ++ V + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAA 345
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L+ G++PNT +YN M+ FC + A +F M +G PDV ++ L+ G
Sbjct: 346 -ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 404
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C +++ ++LL +M +G V +T++Y TL++ C L A L +M G PD
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDM-----------PSNGCLPNLVSYRTLVGGLCDQ 354
IV NT++ G C G+ DA ++ + M P NG P++++Y L+ GL ++
Sbjct: 465 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 524
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G F A++ + M +G P ++I G C ++DEA + + +P+ T+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 584
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ C ++ E+ E+ + I D I
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 618
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 149/295 (50%), Gaps = 6/295 (2%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSY 204
+ A+ F ML +PLP ++ +L+ RP L++ + + + S+
Sbjct: 61 EDAIDLFSDMLR--SRPLPSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI+++ FC + A + F K+ + G+ PDV ++ L+ GLC + +V+ A+D M
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
P+ +++TTL+N LCR+ ++ EA LL RM G P + Y T+V G C++G +
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 325 ACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L M + +PN+V Y ++ LC G A+ M KG P +++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
GFC+ G+ +A +L+E+L+ +P T+ ++ + + E+ +E++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 150/314 (47%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ A+ M+E +P I++ + + + L K
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++PN Y+ ++ + C +G S A LF +M E+G+ PD+ +Y ++ G C +
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL++ML + PD ++Y L+N+ ++ K EA +L M +G P+ + YN++
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 366
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC++ R A + M + GC P++ ++ TL+ G C D + + M +G
Sbjct: 367 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + LI GFC VG ++ A + ++++ +G P T ++ +C +++ E
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486
Query: 433 VLNEIVKVEIKGDT 446
+ + K ++ D
Sbjct: 487 MFKAMQKSKMDLDA 500
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + + D A F M C P +++ + +
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR-IDDG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ NT +YN ++ FC GD++ A L +M GV PD+ + L+ G
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD L+Y L+ L + K EA +L
Sbjct: 475 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 534
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ M S PN+V++ TL+ G C
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 594
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 595 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + EE+E+ +L ++
Sbjct: 655 RNMLTGFWSKEELERAVAMLEDL 677
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL DML +P + + L+ + R ++ L +M+ K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
DI +N ++ FC + A + G P++V++ TL+ GLC + A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M P+ L+ G C G++ EA +L+ +++ G P + T+ IV +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 422 C 422
C
Sbjct: 230 C 230
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D L +F ML + P +++L +V +Y A LF H G+ P+ + I
Sbjct: 37 DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHY-PTAISLFSQLHSKGITPSIATLTI 95
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ +C +S A++L + + G P++ ++ L+ G C V++A+ D++ KG
Sbjct: 96 LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+ D SY +L+N LC+ + R+A +LL +M+ P+++ Y+TV+ G C++ DA
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ + S G L ++V+Y +L+ G C G + A + + +M+ +P + L+
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G++ EA GV ++K GE P T+ ++ C + + E+ N +VK ++ D
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 128/257 (49%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + + V PN +Y+ ++ C + I+ A LF+ + RG++ DV +Y L
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q A LL M+ PD ++ L+++LC++ ++ EA + M +G
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDIV YN ++ GFC +A ++ M G P++++Y L+ G C M D A
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + K P+ + ++LI G C +G++ +++E+ G++P T+ + + C
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC 416
Query: 423 AGEEMEKLGEVLNEIVK 439
+ EK + +IV+
Sbjct: 417 KSKPYEKAISLFRQIVQ 433
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 1/272 (0%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + + P+ ++NI++ A C G I A +F M +RG PD+ +Y L
Sbjct: 247 REATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNAL 306
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
M+G C + V+ A +L M+ +G PD L+Y L+N C+ + EA L ++ K
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++ YN+++ G C+ GR +++++M G P++V+Y + C ++ A
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ I +G P F + +++ FC K+ A L+ LL G P+ T+ +++ +C
Sbjct: 427 LFR-QIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ +L+++ + D E IG
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIG 517
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + M+ N P N +++ L + A +F K G P+ +YN +M
Sbjct: 249 ATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVE-AQGVFAVMMKRGEKPDIVTYNALM 307
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV------------ 256
FC + ++S A LFN+M +RG+ PDV +Y +L+ G C+ V+ A+
Sbjct: 308 EGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLV 367
Query: 257 -----------------------DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+L+++M ++G PD ++Y L++ C+ K +A L
Sbjct: 368 PNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
R V+G PD Y+ +V FC+ + A + L+ + +GC PN+ +Y ++ LC
Sbjct: 428 F-RQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCK 486
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
FD A + M P +I + D+A + E+++ G E
Sbjct: 487 DCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEAR 546
Query: 414 WV 415
V
Sbjct: 547 LV 548
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY L++ + SN A + F M++ +P N ++ + + A
Sbjct: 298 PDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING-YCKIDMVDEAMV 356
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK ++PN +YN ++ C G +S L ++M +RG PD+ +Y I + C
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC 416
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +A+ L ++ +G PD Y ++ + C+ +KL+ A + L + + GC P++
Sbjct: 417 KSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVR 475
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ C++ +A +L M N C P+ V++ T++G L ++ D A+K M
Sbjct: 476 TYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535
Query: 368 ISKGF 372
I +G
Sbjct: 536 IERGL 540
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 26/250 (10%)
Query: 31 FCYSSSSQESPS----SPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYAS 86
FC S++ E+ ++ E + N I C++ + + +L KEI
Sbjct: 310 FCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAM---VLFKEI----- 361
Query: 87 RQPNFRHSNSTYLILI---LKLGRAKYFS-LIDDILITLKSEHYPVTPSLFTY--LIKIY 140
R N + +TY LI KLGR L+D++ +S P + TY + +
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS------PDIVTYNIFLDAF 415
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+S ++A+ FR +++ P + I+E L+ A + + HG PN
Sbjct: 416 CKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEK-LKIAEEALQHLLIHGCCPN 473
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++Y IM+ A C + A TL +KM + PD ++ ++ L +++ ++A L
Sbjct: 474 VRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRL 533
Query: 261 DMLNKGFVPD 270
+M+ +G V D
Sbjct: 534 EMIERGLVND 543
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 177/353 (50%), Gaps = 2/353 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
+ H+ S L +I ++++F+ + +SE L+ +I Y +S D ++
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSI 114
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M++ P N +L +V ++ + F + K V+ + S+ I+++
Sbjct: 115 YYFNEMVDKGFVPGSNCFNNLLTFVVGSSSF--NQWWCFFNESKIKVVLDVYSFGIVIKG 172
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G+I ++ L ++ E G P+V Y L+ G C+K ++ +A DL +M G V +
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVAN 232
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT L++ L + ++ +++ +M+ G P++ YN V+ C++GR DA KV +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFD 292
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G N+V+Y TL+GGLC + + A K M M S +P+ + LI GFC+VG
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVG 352
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
K+ +A + +L G +P T+ ++V C + +++ E+ + IK
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 1/307 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D+L+ L+ + ++T LI + ++A F M +F ++ L
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + F++++ +HGV PN +YN +M C +G A+ +F++M ERGV +
Sbjct: 244 FKN-GIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCN 302
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y L+ GLCR+ + N A +++ M + P+ ++Y TL++ C KL +A L
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCR 362
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+K +G +P +V YN +V GFCR+G A K++++M G P+ V+Y L+
Sbjct: 363 DLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
+ A + M G P LI GFC G+++EA + + +++ P+E +
Sbjct: 423 NMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482
Query: 416 MIVPQIC 422
++ C
Sbjct: 483 TMILGYC 489
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A DLF K G++ N +Y +++ NG + ++ KM E GV P++ +Y
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNC 273
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M LC+ + A + ++M +G + ++Y TL+ LCR+ K EA K++ +MK
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYV 333
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
NP+++ YNT++ GFC G+ A + D+ S G P+LV+Y LV G C +G A
Sbjct: 334 INPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAA 393
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K ++ M +G P LI F ++ A + + + G P T+ +++
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGF 453
Query: 422 CAGEEMEKLGEVLNEIVK 439
C +M + + +V+
Sbjct: 454 CIKGQMNEASRLFKSMVE 471
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ P+ +YN+++ FC GD S A + +M ERG+ P +Y I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ R + A+ L M G VPD +Y+ L++ C K ++ EA +L M K
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM 473
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YNT++LG+C+EG + A ++ DM PN+ SY L+ LC + A+
Sbjct: 474 LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAE 533
Query: 362 KYMQLMISKGFSP 374
++ MI G P
Sbjct: 534 DLVEKMIDSGIDP 546
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH- 178
K + + V P+L+TY ++ + A K F M E N ++ L
Sbjct: 258 KMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 179 -RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
N D KS + + PN +YN ++ FC G + A +L + RG+ P +
Sbjct: 318 KANEANKVMDQMKS---YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L+ G CRK + A ++++M +G P ++YT L+++ R + A +L M
Sbjct: 375 TYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSM 434
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ G PD+ Y+ ++ GFC +G+ +A ++ + M PN V Y T++ G C +G
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
A + + M K +P+ + LI+ C K+ EA ++E+++ +G P +
Sbjct: 495 YRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD 548
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 165/340 (48%), Gaps = 9/340 (2%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P LA + F +A +Q ++HS S Y +++ + + + ++ PV+ F
Sbjct: 159 PKLAYKFFIWAGQQEGYQHSTSMYNLVMKVFAECGEVKAMWRLFEEMAAKGLPVSSRTFH 218
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
LI + L R ++ F FN +P N IL L+T Y L + H+
Sbjct: 219 LLICASVKVGLRRRLVERFIRSSTFNYRPFRNAFNAILYTLLTIEQY-----SLIEWVHE 273
Query: 195 HGVL----PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+L P+ +YN+++RA G + + L ++M + G+ PD+ +Y +L+ L +
Sbjct: 274 KMILEGYSPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNLLLHVLGKGD 333
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A++LL M + G P+ L +T L++ L R L M KGC+PD+V Y
Sbjct: 334 KPLAALNLLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYT 393
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ + G +A + +DM G LPN+ +Y +++ GLC G FD A ++ M S
Sbjct: 394 VMIASYVAAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSH 453
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G +P+FSV +L++ N GK +A V++ + G H
Sbjct: 454 GCTPNFSVYSSLVRRLRNAGKDTQANNVIKYMTDKGHYLH 493
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 128/298 (42%), Gaps = 36/298 (12%)
Query: 176 VTHRNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V Y + A+ F + + G +T YN++M+ F G++ + LF +M +G+
Sbjct: 153 VNRERYPKLAYKFFIWAGQQEGYQHSTSMYNLVMKVFAECGEVKAMWRLFEEMAAKGLPV 212
Query: 235 DVESY-------------RILMQGLCRKSQVN-----RAVDLL----------------- 259
++ R L++ R S N A + +
Sbjct: 213 SSRTFHLLICASVKVGLRRRLVERFIRSSTFNYRPFRNAFNAILYTLLTIEQYSLIEWVH 272
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E M+ +G+ PD L+Y +L + KL + ++LL M G PD+ YN ++ +
Sbjct: 273 EKMILEGYSPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNLLLHVLGKG 332
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ + A +L M GC PN++ + L+ GL G + + + M+ KG P
Sbjct: 333 DKPLAALNLLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCY 392
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I + G+ +EA +++L G+ P+ T+ ++ +CA E +K +L ++
Sbjct: 393 TVMIASYVAAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDM 450
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--D 147
N+R + + ++ L + +SLI+ + + E Y +P + TY + + A+ L D
Sbjct: 244 NYRPFRNAFNAILYTLLTIEQYSLIEWVHEKMILEGY--SPDVLTYNVVLRAKYMLGKLD 301
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+ + M + P N +L +L L A +L G PN + +
Sbjct: 302 QFHQLLDEMGKNGLTPDLHTYNLLLHVLGKGDKPL-AALNLLNYMSDVGCRPNVLHFTNL 360
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ G++ F++M ++G PDV Y +++ + A +DML +G
Sbjct: 361 IDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYVAAGEFEEAQRFFDDMLMRGQ 420
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P+ +Y +++ LC + +A+ +L M GC P+ Y+++V G+ A
Sbjct: 421 LPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSHGCTPNFSVYSSLVRRLRNAGKDTQANN 480
Query: 328 VLEDMPSNGCLPNLVS 343
V++ M G +L+S
Sbjct: 481 VIKYMTDKGHYLHLLS 496
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 34/329 (10%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTF-RSMLEFNC-KPL-PKQLNRILELLVTHRNYLR 183
P T + +A + PDRALKTF R++ + C +P P+ N +++ L+ N +
Sbjct: 87 PCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALL-RENMVG 145
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD-------- 235
++ + K GV PN +YN+++RA C N + A + ++M +G PD
Sbjct: 146 AVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIV 205
Query: 236 ----------------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
SY ++ LCR+ ++ ++ DM+ +G P+ ++
Sbjct: 206 SVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 265
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YTT++++ C+ +LR A +L RM + GC P++V + +V G +GR DA + M
Sbjct: 266 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 325
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G P+ VSY L+ GLC G A + M G P+ LI GF G +
Sbjct: 326 AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLG 385
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A + ++ ++G P+ + +V C
Sbjct: 386 GAISIWNDMSRSGCKPNVVVYTNMVDVFC 414
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 161/340 (47%), Gaps = 7/340 (2%)
Query: 76 LLAKEIFDYASRQPNFRHSNS-TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
++ + Y + + + H N TY +L+ L + +L + + P +
Sbjct: 143 MVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYA 202
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
++ + + + D A + +M P+ N I+ L + ++ F +
Sbjct: 203 TIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIV-LALCREFRMQEVFSVVSDMVG 256
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ PN +Y ++ AFC G++ +A + +M G P+V ++ L++GL +V+
Sbjct: 257 RGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHD 316
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+D+ M+ +G+ P T+SY L+ LC L+ A +L M+ GC P++ Y+T++
Sbjct: 317 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 376
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
GF + G A + DM +GC PN+V Y +V C + MF+ AK + M+ + P
Sbjct: 377 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 436
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ + LI+ C+ +V A GV E+ + G P+ T+
Sbjct: 437 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTY 476
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 160/318 (50%), Gaps = 6/318 (1%)
Query: 129 TPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP++ FT L++ + AL +R M+ P N ++ L + + L+ A
Sbjct: 295 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD-LKGAS 353
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ S +HG PN ++Y+ ++ F GD+ A +++N M G P+V Y ++
Sbjct: 354 SILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVF 413
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+K N+A L++ ML + P+T+++ TL+ SLC +++ A + M+ GC P+
Sbjct: 414 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 473
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ G REG DA ++ +M S+G +LV+Y T+V GLC M A ++
Sbjct: 474 RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGK 533
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
MI +G P+ A+I +C G+V A +L + + + +++ ++C
Sbjct: 534 MIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELC---N 590
Query: 427 MEKLGEVLNEIVKVEIKG 444
+KL + + ++K+ +G
Sbjct: 591 QDKLVDAMTYLLKMLYEG 608
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 6/303 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
S +Y ILI L IL ++ E + P++ TY LI ++++ A+
Sbjct: 332 STVSYNILIRGLCSVGDLKGASSILNSM--EQHGCFPNVRTYSTLIDGFSKAGDLGGAIS 389
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
+ M CKP ++++ + A L PNT ++N ++R+
Sbjct: 390 IWNDMSRSGCKPNVVVYTNMVDVF-CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 448
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A +F++M G +P+ +Y L+ GL R+ A+ ++ +M + G
Sbjct: 449 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 508
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y T+++ LC+ + REA + +M V+G P+ ++ ++ +C+EG A +L
Sbjct: 509 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 568
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG-FCNVG 390
M C N++ Y L+ LC+Q A Y+ M+ +G P+ + L++G F N+G
Sbjct: 569 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 628
Query: 391 KVD 393
++
Sbjct: 629 CIE 631
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LR A + G PN ++ ++R +G + A ++ M G P SY I
Sbjct: 279 LRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNI 338
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC + A +L M G P+ +Y+TL++ + L A + M G
Sbjct: 339 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 398
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P++V Y +V FC++ A +++ M C PN V++ TL+ LCD A
Sbjct: 399 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRAL 458
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M G P+ + LI G G +A ++ E+ G T+ +V +
Sbjct: 459 GVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGL 518
Query: 422 C 422
C
Sbjct: 519 C 519
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 8/261 (3%)
Query: 78 AKEIFDYASR---QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A I++ SR +PN + + KL + SLID +L+ E+ P F
Sbjct: 387 AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL----ENCPPNTVTFN 442
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
LI+ + RAL F M C P + N ++ L N A +
Sbjct: 443 TLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN-CGDALHMVTEMQS 501
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
HG+ + +YN ++ C A KM +G+ P+ ++ ++ C++ +V
Sbjct: 502 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 561
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +L M + L YT L+ LC + KL +A L +M +G P+ V +N +V
Sbjct: 562 AAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 621
Query: 315 GFCREGRAIDACKVLEDMPSN 335
G R I+ ++ + N
Sbjct: 622 GVFRNLGCIEPSDFIQHITMN 642
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 3/332 (0%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
Y P TY ++ +S AL FR M E N K Q + +++ L ++
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF- 290
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A LF G+ + +Y+ ++ C +G + +M R ++PDV ++ L
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ ++ ++ A +L +M+ +G PDT++Y +L++ C++ L EA ++ M KGC
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDIV Y+ ++ +C+ R D ++ ++ S G +PN ++Y TLV G C G + AK+
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
Q M+S+G P L+ G C+ G++++A + E++ K+ + +I+ +C
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ + + +K D IG
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 562
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL M+E+ +P +L L N A DLF+ + + + Y+I++
Sbjct: 223 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS-ALALDLFRKMEERNIKASVVQYSIVI 281
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C +G A +LFN+M +G+ DV +Y L+ GLC + + +L +M+ + +
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++++ L++ ++ KL EA +L M +G PD + YN+++ GFC+E +A ++
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M S GC P++V+Y L+ C D + + + SKG P+ + L+ GFC
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK++ A + +E++ G P T+ +++ +C E+ K E+ ++ K +
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT----- 516
Query: 449 VEAGIGLEDYLI 460
GIG+ + +I
Sbjct: 517 --LGIGIYNIII 526
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 128/226 (56%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++P+ +++ ++ F G + A L+N+M RG+ PD +Y L+ G C+++ ++ A
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 399
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ + M++KG PD ++Y+ L+NS C+ K++ + +L + KG P+ + YNT+VLGF
Sbjct: 400 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 459
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G+ A ++ ++M S G P++V+Y L+ GLCD G + A + + M +
Sbjct: 460 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 519
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + +I G CN KVD+A + L G P T+ +++ +C
Sbjct: 520 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 565
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + A K G P+T +++ ++ FC G +S A L ++M E PD+ + L+
Sbjct: 153 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 212
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC K +V+ A+ L++ M+ GF PD ++Y +LN LC+ A L +M+ +
Sbjct: 213 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y+ V+ C++G DA + +M G ++V+Y +L+GGLC+ G +D K +
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ MI + P ALI F GK+ EA + E++ G AP T+ ++ C
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 390
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 7/371 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESN 144
+ N + S Y I+I L + F DD L E + + TY LI
Sbjct: 267 ERNIKASVVQYSIVIDSLCKDGSF---DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 323
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D K R M+ N P + ++++ V L A +L+ G+ P+T +Y
Sbjct: 324 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMITRGIAPDTITY 382
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ FC + A +F+ M +G PD+ +Y IL+ C+ +V+ + L ++ +
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 442
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG +P+T++Y TL+ C+ KL A +L M +G P +V Y ++ G C G
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 502
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A ++ E M + + Y ++ G+C+ D A + KG P + +I
Sbjct: 503 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 562
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G + EA + ++ + G P + T+ +++ G + E++ E+
Sbjct: 563 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 622
Query: 445 DTRIVEAGIGL 455
D+ ++ I +
Sbjct: 623 DSSTIKMVIDM 633
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 1/298 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ F SM++ P P NR+ + + Y K +G+ + + IM+
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY-DLVLGFCKGMELNGIEHDMYTMTIMI 141
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+C + A+++ + ++ G PD ++ L+ G C + +V+ AV L++ M+
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++ +TL+N LC K ++ EA L+ RM G PD V Y V+ C+ G + A +
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
M ++V Y ++ LC G FD A M KG +LI G CN
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
GK D+ +L E++ P T+ ++ ++ + E+ NE++ I DT
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 48/269 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP- 184
+ P TY LI + + N A + F M+ C+P I+ + +Y +
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP------DIVTYSILINSYCKAK 428
Query: 185 ----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
LF+ G++PNT +YN ++ FC +G ++ A LF +M RGV P V +Y
Sbjct: 429 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 488
Query: 241 ILMQGLCRKSQVNRAVDLLEDML-----------------------------------NK 265
IL+ GLC ++N+A+++ E M +K
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD ++Y ++ LC+K L EA L +MK GC PD YN ++ I +
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+++E+M G + + + ++ L D+
Sbjct: 609 VELIEEMKVCGFSADSSTIKMVIDMLSDR 637
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 120/291 (41%)
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
L K + R++ L N+ + H + SY +R + ++ A L
Sbjct: 27 LKKMIQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDL 86
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F M + +P + L + R Q + + + M G D + T ++N CR
Sbjct: 87 FESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCR 146
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
KKKL A+ +L R G PD + ++T+V GFC EGR +A +++ M P+LV+
Sbjct: 147 KKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT 206
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
TL+ GLC +G A + M+ GF P ++ C G A + ++
Sbjct: 207 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 266
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ + +++ +C + + NE+ IK D + IG
Sbjct: 267 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+L ++ + ++ + S P PS+ TY L+ ++ ++AL+ F
Sbjct: 451 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFE 508
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + + L + I+ + + + + A+ LF S GV P+ +YN+M+ C
Sbjct: 509 KM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 567
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G +S A LF KM E G PD +Y IL++ S + +V+L+E+M GF D+ +
Sbjct: 568 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 627
Query: 275 TTLLNSLCRKK 285
+++ L ++
Sbjct: 628 KMVIDMLSDRR 638
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 8/352 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY ++I + R +IL L S Y P + +Y ++K + D F
Sbjct: 224 TYNVIINGMCREGRVDDAKEILNRLSS--YGFQPDIVSYTTVLKGLCAARRWDDVKVLFA 281
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ C P + ++ + A + + +HG PNT NI++ A C
Sbjct: 282 EMVDKKCVPNEVTFDMLVRFFC-RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 340
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + AY N M G PD SY +++GLCR + A +LL +M+ K P+ +++
Sbjct: 341 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 400
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T + LC+K + +A KL+ M GC+ IV YN +V GFC +GR A ++ ++P
Sbjct: 401 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP- 459
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
C PN ++Y TL+ GLC D A + + MI K + + L+ FC G V+E
Sbjct: 460 --CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEE 517
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
A ++ ++++ G P+ T+ ++ I E+ E+L+ +V + DT
Sbjct: 518 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 569
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+ML+ C+P +LE + + A ++ G PN +YN+++ C
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGF-GEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A + N++ G PD+ SY +++GLC + + L +M++K VP+ +++
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+ CR + A ++L +M GC P+ N V+ C++GR DA L +M
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAK--------------------------------- 361
GC P+ +SY T++ GLC G ++ AK
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415
Query: 362 --KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
K ++LM G S +AL+ GFC G+VD A LE P+ T+ ++
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTLLT 472
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+C E ++ E+L E+++
Sbjct: 473 GLCHAERLDAAAELLAEMIQ 492
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML +G P ++YT LL ++C+ EA +L M+ KGC P+IV YN ++ G CREGR
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA ++L + S G P++VSY T++ GLC +D K M+ K P+
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
L++ FC G V+ A VL+++ + G P+ +++ IC ++ + LN +
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 442 IKGDT 446
DT
Sbjct: 358 CNPDT 362
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 31/306 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA + ++L + ++ P F I I + L ++A+K M
Sbjct: 364 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423
Query: 157 LEFNC---------------------------KPLPKQLNRI----LELLVTHRNYLRPA 185
E+ C LP + N I L + H L A
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 483
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + N ++N+++ FC G + A L N+M E G P++ ++ L+ G
Sbjct: 484 AELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 543
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + A++LL +++KG DT++Y+++++ L R+ + EA ++L ++ G P
Sbjct: 544 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 603
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ C+ A M SNGC+PN +Y L+ GL +G+ A+ +
Sbjct: 604 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 663
Query: 366 LMISKG 371
+ +KG
Sbjct: 664 ELYAKG 669
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 147/305 (48%), Gaps = 4/305 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T +++ + + A + M+ NC P N + +L + + A L +
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC-QKGLIEQAIKLIELM 423
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++G +YN ++ FC G + A LFN + P+ +Y L+ GLC ++
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERL 480
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +LL +M+ K + +++ L++ C+K + EA +L+ +M GC P+++ +NT+
Sbjct: 481 DAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 540
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G ++ + +A ++L + S G + ++Y ++V L + + A + + + G
Sbjct: 541 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 600
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + + ++ C + D+A ++ G P+E T+++++ + +++
Sbjct: 601 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 660
Query: 433 VLNEI 437
VL+E+
Sbjct: 661 VLSEL 665
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F+ +PN TY L+ L A+ ++L + + P+ F L+
Sbjct: 451 ALELFNNLPCEPN----TITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLV 506
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP-----------LPKQLN--RILELL--------- 175
+ + + A++ M+E C P + K N LELL
Sbjct: 507 SFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVS 566
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + A + + G+ P YN ++ A C + A
Sbjct: 567 LDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDF 626
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
F M G MP+ +Y IL++GL + + A +L ++ KG + +L
Sbjct: 627 FAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 675
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 130/257 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ L + G+ PN +YN ++ C +G + A + +M +G++PD Y
Sbjct: 26 LQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTT 85
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ + A L ++M + VPD ++YT ++ LCR K+ EA K+ +M +G
Sbjct: 86 LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y T++ G+C+ G A + M +G PN+V+Y L GLC G D A
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M KG + ++L+ G C G + +A ++EE+ AG P T+ ++
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265
Query: 422 CAGEEMEKLGEVLNEIV 438
C EM K E+L E++
Sbjct: 266 CKTGEMVKAHELLREML 282
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 3/306 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L+TY +I + +S D A + R M+ P +++ N ++ A+
Sbjct: 43 PNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN-IQAAYK 101
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF K ++P+ +Y ++ C G + A +FNKMF RGV PD +Y L+ G C
Sbjct: 102 LFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYC 161
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ +A L M+ G P+ ++YT L + LC+ ++ A +LL M KG +I
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN++V G C+ G A K++E+M G P+ +++ TL+ C G A + ++ M
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G P + L+ GFC G +++ +L +L+ G P+ T+ ++ Q C M
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM 341
Query: 428 EKLGEV 433
E+
Sbjct: 342 RCTTEI 347
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 134/248 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +F GV P+ +Y ++ +C +G++ A++L N+M + G+ P+V +Y
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L GLC+ QV+ A +LL +M KG + +Y +L+N LC+ +R+A KL+ M+V G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD + + T++ +C+ G + A ++L +M G P ++++ L+ G C GM + +
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M+ KG P+ + ++L+K +C + + + + G P +T+ +++
Sbjct: 311 RLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGH 370
Query: 422 CAGEEMEK 429
C M++
Sbjct: 371 CKARNMKE 378
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 130/243 (53%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G P+ SY+ ++ +C G++ L +M +G+ P++ +Y ++ LC+ +V+
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +L +M+N+G VPDT+ YTTL++ C+ ++ AYKL M+ + PD + Y V+
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G CR G+ ++A KV M S G P+ V+Y TL+ G C G + A M+ G +P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ AL G C +G+VD A +L E+ G + T+ +V +C + + +++
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243
Query: 435 NEI 437
E+
Sbjct: 244 EEM 246
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 118/225 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF L + G+ PN +Y + C G + A L ++M +G+ ++ +Y
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + +AV L+E+M G PDT+++TTL+++ C+ ++ +A++LL M +G
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P ++ +N ++ GFC G D ++L M G +PN +Y +L+ C +
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTT 345
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ + M ++G P + + LIKG C + EA + +E+ + G
Sbjct: 346 EIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 95/175 (54%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G PD +SY+T++N C +L++ KL+ M++KG P++ YN+++L C+ G+ D
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +VL +M + G +P+ V Y TL+ G C G A K M + P F A+I
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G C GK+ EA V ++ G P E T+ ++ C EMEK + N++V+
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ 178
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%)
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
MK +G PD+V Y+TV+ G+C G K++++M G PNL +Y +++ LC G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A++ ++ MI++G P V LI GFC +G + A + +E+ K P +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ +C +M + +V N++ ++ D
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPD 149
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
YP T + FT L+ Y ++ +A + R ML+ +P N ++ L
Sbjct: 252 YPDTIT-FTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS-GMLEDG 309
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G++PNT +YN +M+ +C ++ ++ M RGVMPD +Y IL++G
Sbjct: 310 ERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKG 369
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + A L ++M KGF SY +++ +KKK+ EA +L M+ +G D
Sbjct: 370 HCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAAD 429
Query: 306 IVHYNTVV 313
YN V
Sbjct: 430 AEIYNLFV 437
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 3/311 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFTY LI + +RA + ML P N +L + + + A
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML-VESCRKEDVWEAER 350
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F + GV+P+ S++ ++ F NG++ A F KM G++PD Y IL+ G C
Sbjct: 351 VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYC 410
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R V+ A+ + +M+ +G V D ++Y TLLN LCR K L +A +L M +G PD
Sbjct: 411 RNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFY 470
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
T++ G+C++G A + E M P++V+Y TL+ G C G + AK+ M
Sbjct: 471 TLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDM 530
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
IS+ P + LI GFC++G V EA + +E+ + G P T I+ +
Sbjct: 531 ISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNL 590
Query: 428 EKLGEVLNEIV 438
K + LN ++
Sbjct: 591 SKANDFLNTMI 601
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 1/308 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI Y ++ ALK M+E C N +L L + L A +LFK
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGK-MLDDADELFKE 459
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ + ++ +C +G+++ A +LF M R + PDV +Y LM G C+ +
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A +L DM+++ P +S++ L+N C + EA++L MK KG P +V NT
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+ R G A L M S G P+ ++Y TL+ + FD A + M +G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ +A++ GF G++ EA VL +++ G P + T+ ++ + + M++
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699
Query: 432 EVLNEIVK 439
V +E+++
Sbjct: 700 RVHDEMLQ 707
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + F ML+ P + I+ + + L A F+ G++P+T Y I++
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVF-SRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+C N D+S A + N+M ERG + DV +Y L+ GLCR ++ A +L ++M+ +G
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD + TTL++ C+ + +A L M ++ PD+V YNT++ GFC+ G A ++
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
DM S P+ +S+ L+ G C G+ A + M KG P + +IKG+
Sbjct: 527 WYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G + +A L ++ G P T+ ++ E ++ ++N +
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + AF L G+ P +YN ++ C G A + ++M G+ P+ +
Sbjct: 272 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 331
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ ++ CRK V A + +ML +G VPD +S+++++ R +L A +MK
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD V Y ++ G+CR A K+ +M GC+ ++V+Y TL+ GLC M D
Sbjct: 392 GVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLD 451
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M+ +G P F LI G+C G + +A + E + P T+ ++
Sbjct: 452 DADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 511
Query: 419 PQICAGEEMEKLGEVLNEIVKVEI 442
C EMEK E+ +++ EI
Sbjct: 512 DGFCKVGEMEKAKELWYDMISREI 535
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 174/383 (45%), Gaps = 3/383 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDI 117
P+ P +Q + ++ +P + + + + + S L +I K G + +ID +
Sbjct: 82 PLLLPNLIQTIASTSPNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSG-VSHVEVIDSL 140
Query: 118 LITLKSEHYPVTPSL-FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ T S + F LI+ Y ++ + F+ + + N +L +V
Sbjct: 141 ISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIV 200
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
++ A+ +++ K G + N + NIM+ A C +G + ++M E+GV D+
Sbjct: 201 -KVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADL 259
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y L+ CR+ V+ A L++ M KG P +Y L+N LC++ A ++L
Sbjct: 260 VTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDE 319
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M G P+ +N +++ CR+ +A +V +M G +P+L+S+ ++VG G
Sbjct: 320 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A Y + M G P + LI G+C V A + E+++ G T+
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ +C G+ ++ E+ E+V+
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVE 462
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 164/370 (44%), Gaps = 23/370 (6%)
Query: 83 DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAE 142
D++S + + HSNST + +LI +L K ++YP+ L LI+ A
Sbjct: 51 DFSSLRTHLLHSNSTLTL-----------TLIPQLL--QKCQNYPL---LLPNLIQTIAS 94
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELL----VTHRNYLRPAFDLFKSAHKHGVL 198
++ + T L K LP+ + +L ++ V+H + + S+
Sbjct: 95 TSPNPSIIATLIHFL-VQSKKLPEAQSLLLRIIRKSGVSHVEVIDSL--ISTSSSNLNSN 151
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
N +++++R + + F + +RG + + L+ + + V+ A +
Sbjct: 152 QNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKV 211
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
ED + G + + + ++N+LC+ KL L M+ KG D+V YNT+V +CR
Sbjct: 212 YEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR 271
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G +A +++ M G P L +Y L+ GLC +G ++ AK+ + M+ G P+ +
Sbjct: 272 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 331
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ ++ C V EA V E+L+ G P ++ IV E+ + ++
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 439 KVEIKGDTRI 448
V + DT I
Sbjct: 392 GVGLVPDTVI 401
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 175/360 (48%), Gaps = 3/360 (0%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
+ F +A ++ NF H ++TY+ LI L A + + + + P+ + ++K+
Sbjct: 109 QFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKV 168
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VL 198
++ + ++AL F + CKP N ++ L++ + +L+ G L
Sbjct: 169 LGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMI-LMLMQEGHHEKVHELYNEMCNEGDCL 227
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T +Y+ ++ AF G A +LF++M E G+ P + Y ++ + +V +A+ L
Sbjct: 228 PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGL 287
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+++M KG +YT L+ + + K+ EAY + M +GC PD+V N ++ +
Sbjct: 288 VQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHFS 377
GR DA K+ E+M S C PN+V+Y T++ L + + A + + M G P
Sbjct: 348 AGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI GFC +V++A +LEE+ + G AP + ++ + + E E+ E+
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 161/371 (43%), Gaps = 80/371 (21%)
Query: 96 STYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
+T L + KLGR K L+ + +K + +T +T LIK ++ + A F
Sbjct: 269 TTILGIYFKLGRVEKALGLVQE----MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCF 213
+ML+ CKP +N ++ LL L A LF+ PN +YN +++A F
Sbjct: 325 NMLKEGCKPDVVLINNLINLL-GKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFES 383
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
S A+ + KM E GV+P +Y IL+ G C+ ++V +A+ LLE+M KGF P +
Sbjct: 384 KARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAA 443
Query: 274 YTTLLNSLCRKKK-----------------------------------LREAYKLLCRMK 298
Y +L+N+L + K+ L EA L MK
Sbjct: 444 YCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMK 503
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL----------------- 341
GCNPD+ YN ++ G R G +A +L M NGC P+L
Sbjct: 504 KLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 342 ------------------VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
VSY T++G L GMF+ A K M+ M SKGF +++
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Query: 384 KGFCNVGKVDE 394
+ VGK+DE
Sbjct: 624 EA---VGKIDE 631
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
R D +Y L+ L + +++M+ V + ++ L + K + +
Sbjct: 118 RNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK 177
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLV 348
A + ++K + C P YN+++L +EG ++ +M + G CLP+ V+Y L+
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALI 237
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G D A M G P + ++ + +G+V++A G+++E+ + G A
Sbjct: 238 AAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCA 297
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
T+ ++ + ++E+ + ++K K D ++ I L
Sbjct: 298 LTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS F L+ + + L AL+ F MLE P N I++ + A +L
Sbjct: 465 PSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAH-CREGRVEEALNLM 523
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
G+ PN +YN ++ C A LF M +R V+P V Y L+ G ++
Sbjct: 524 NEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQ 583
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
S +A+ L ML G PD ++YT L+N LC + ++ EAY L +M G PD + Y
Sbjct: 584 SNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISY 643
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
+V+ GFCR G A + +M G LP +V+Y +LV G C D+A + M
Sbjct: 644 TSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKR 703
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
KG +P + LI G +D+A +L E+ + G P T++M+
Sbjct: 704 KGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 1/322 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
DI L + Y + ++ LIK + D A K M+ N P P ++
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ A + F + G+LP+ + N+++ A C G + A L N+M +G+ P+
Sbjct: 476 CKMGLWVN-ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPN 534
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y ++ LC++ + RA++L ML + +P + Y+TL++ ++ ++A L
Sbjct: 535 LFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYA 594
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
RM G PD+V Y ++ C R +A + + M NG P+ +SY +++ G C G
Sbjct: 595 RMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIG 654
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A M+ +G P +L+ G+C + ++D A +++E+ + G P T+
Sbjct: 655 DMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYN 714
Query: 416 MIVPQICAGEEMEKLGEVLNEI 437
+++ ++K E+LNE+
Sbjct: 715 VLIAAHRRRGNLDKALEMLNEM 736
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 130/259 (50%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y+ A D +S L N YN ++ C G++ A + +M G+ PDV +Y
Sbjct: 305 YVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYS 364
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ G C++ V + + L+E+M P +SY++L + LC+K+ + + +
Sbjct: 365 ILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAA 424
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G D Y+ ++ GFC +G A K++E+M N P+ ++ +LV G C G++ A
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ +M+ G P + + +I C G+V+EA ++ E+ G P+ T+ ++ +
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+C + E+ E+ ++K
Sbjct: 545 LCKERKSERALELFPLMLK 563
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 155/356 (43%), Gaps = 38/356 (10%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P ++TY I I+ D + L M N +P + + L R +
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKR-LSDIS 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL---------------------- 223
D+F+ G + +Y+I+++ FC GD+ A+ L
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHG 474
Query: 224 -------------FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
FN M E G++P + + +++ CR+ +V A++L+ +M +G P+
Sbjct: 475 FCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPN 534
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+Y ++N LC+++K A +L M + P +V Y+T++ GF ++ + A +
Sbjct: 535 LFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYA 594
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M G P++V+Y L+ LC + A + M G +P ++I GFC +G
Sbjct: 595 RMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIG 654
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +A + E+L+ G P T+ +V C ++ +++E+ + I D
Sbjct: 655 DMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDV 710
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 129 TPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY IY + AL RS++ N N I+ L + L A
Sbjct: 287 SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL-CKKGELDEAL 345
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G+ P+ +Y+I++ FC GD+ L +M + P + SY L GL
Sbjct: 346 KVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGL 405
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+K + ++D+ D+ G+ D +Y+ L+ C + L A+KL+ M PD
Sbjct: 406 CKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDP 465
Query: 307 VHYNTVVLGF-----------------------------------CREGRAIDACKVLED 331
++ ++V GF CREGR +A ++ +
Sbjct: 466 SNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNE 525
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M + G PNL +Y ++ LC + + A + LM+ + P V LI GF
Sbjct: 526 MQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSN 585
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+A + +LK G P + +++ +C M
Sbjct: 586 SQKALMLYARMLKIGVTPDMVAYTILINILCHRSRM 621
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 148/322 (45%), Gaps = 25/322 (7%)
Query: 117 ILITLKSEHYPVTPSL-FTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILEL 174
++ KS ++ V + F+ +K Y S R++ FR+++ + ++ +L
Sbjct: 94 VVKVFKSLNWEVARHIKFSTTMKKYGFS----RSIDAFRTVVNVLALAGMHMEVYALLRD 149
Query: 175 LVTHRNYLR-PAFDLF-------KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+V + N + AF+LF K A + ++ ++++++ F N + A +F +
Sbjct: 150 IVCYYNKVNLDAFELFPILLESPKDAARSVIV-----FDLLIKVFAANSMLENAVDVFLQ 204
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK- 285
+ G+ S L++ L ++ L E+M + G P+ +YT ++N C+
Sbjct: 205 AKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNF 264
Query: 286 -----KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
R+A ++L M+ G +P +V Y+T + G CR G A + + S L N
Sbjct: 265 GEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVN 324
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ Y ++ GLC +G D A K ++ M S G SP LI GFC G V++ ++E
Sbjct: 325 VYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIE 384
Query: 401 ELLKAGEAPHEDTWVMIVPQIC 422
E+ + P ++ + +C
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLC 406
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 39/198 (19%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V PS+ Y LI +A+ + +AL + ML+ P ++ +L HR+ + A
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL-CHRSRMCEA 624
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-------------- 231
++LFK ++G+ P+ SY ++ FC GD+ A+ LFN+M +RG
Sbjct: 625 YNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDG 684
Query: 232 ---------------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+ PDV +Y +L+ R+ +++A+++L +M G +PD
Sbjct: 685 YCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744
Query: 271 TLSYTTLLNSLCRKKKLR 288
++Y +L L + KKL+
Sbjct: 745 HMTY-MMLEWLLKAKKLK 761
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 1/334 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA + F + Q NFRH+ + Y +L+ + + ++ + + YP T F L
Sbjct: 134 LAYKFFVWFGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L ++ F FN +P N IL L+ + Y + +++ + G
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDW-VYEQMLEDG 252
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P+ +YNI+M A G Y L ++M + G PD+ +Y IL+ L ++ A+
Sbjct: 253 FSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+LL M G P + +TTL++ L R KL + M GC PD+V Y ++ G+
Sbjct: 313 NLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGY 372
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
G A ++ ++M G LPN+ +Y +++ G C G F A ++ M S+G +P+F
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNF 432
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
V L+ N GKV EA +++++++ G H
Sbjct: 433 VVYSTLVNNLRNAGKVLEAHEIVKDMVEKGHYVH 466
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 7/287 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFD--YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ C LI + + LA+++ + S+ N+R +Y ++ L K + LID +
Sbjct: 186 TACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY 245
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + + +P + TY I ++A L DR + M++ P N +L L
Sbjct: 246 EQMLEDGF--SPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
T L A +L + GV P + ++ G + ++M + G PDV
Sbjct: 304 TGNKPL-AALNLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDV 362
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +++ G ++ +A ++ ++M KG +P+ +Y +++ C K +EA LL
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKE 422
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
M+ +GCNP+ V Y+T+V G+ ++A ++++DM G +L+S
Sbjct: 423 MESRGCNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEKGHYVHLIS 469
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 21/335 (6%)
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+KS H V P +FTY LI + + L +A K F M+ C P ++ +
Sbjct: 506 MKSNH--VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE- 237
R + A +LF+ G +PN +Y ++ C +G I A ++ +M +PDV+
Sbjct: 564 RK-MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDM 622
Query: 238 ---------------SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+Y L+ GLC+ +V A DLL+ M +G P+ + Y L++ C
Sbjct: 623 YFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+ KL EA + +M +G P++ Y++++ ++ R A KVL M N C PN++
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y ++ GLC G D A + M +M KG P+ A+I GF GKVD+ ++ ++
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G AP+ T+ +++ CA ++ ++L+E+
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 2/247 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A DL G PN Y+ ++ FC G + A +F KM ERG P+V +Y
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ L + +++ A+ +L ML P+ + YT +++ LC+ K EAY+L+ M+ KG
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+P++V Y ++ GF + G+ +++ M + GC PN V+YR L+ C G+ D A
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M + H + +I+GF + + G+L+E+ + P + +++
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSF 889
Query: 422 CAGEEME 428
C +E
Sbjct: 890 CKAGRLE 896
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 48/361 (13%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
++ L+ K GR + + L ++ E + + ++T +I E++L + A+ M
Sbjct: 273 FVHLLCKAGRWR------EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMR 326
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+C P RIL + L + G P+ + +N ++ A+C +GD
Sbjct: 327 SSSCIP-NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQG-------------------------------- 245
S AY L KM + G P Y IL+ G
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445
Query: 246 ---------LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
LC + +A ++ +M++KGF+PDT +Y+ ++ LC K+ A+ L
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
MK PD+ Y ++ FC+ G A K ++M +GC PN+V+Y L+
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + ++M+S+G P+ ALI G C G++++AC + + + P D +
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625
Query: 417 I 417
I
Sbjct: 626 I 626
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 167/403 (41%), Gaps = 37/403 (9%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
+P L + F +A RQ + H+ Y L+ LG + + L ++ E + L
Sbjct: 141 NPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLL 200
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV----------THRNYLR 183
LI+ + L + AL+ + + KP N ++ + + HR
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 184 PAFD------------LFKSAHKHGVLP---------NTKSYNIMMRAFCFNGDISIAYT 222
F+ L K+ L +T Y M+ C A
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
++M +P+V +YRIL+ G RK Q+ R +L M+ +G P + +L+++ C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR--AIDACKVLE----DMPSNG 336
R AYKLL +M GC P V YN ++ G C + ++D ++ E +M
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH 440
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+ N V+ L LC G F+ A ++ M+SKGF P S +I CN KVD A
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ EE+ P T+ +++ C +++ + +E+V+
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--A 185
P++ TY +I + ++ D+ L+ R M C P VT+R + A
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN----------FVTYRVLINHCCA 823
Query: 186 FDLFKSAH------KHGVLP-NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
L AH K P + Y ++ F N + I+ L +++ E +P + +
Sbjct: 824 AGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPA 881
Query: 239 YRILMQGLCRKSQVNRAVDLLEDM--LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
YRIL+ C+ ++ A++L + M D Y++L+ SL K+ +A++L
Sbjct: 882 YRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYAD 941
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAI 323
M +G P++ + +V G R R +
Sbjct: 942 MIKRGGIPELSIFFYLVKGLIRINRTL 968
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 151/327 (46%), Gaps = 40/327 (12%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRIL-ELLVTHRNYLRPAF 186
P++ TY I S L + A+ + ML+ P N ++ EL V R A
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR--FSTAL 393
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F HG L NT++YN +++ C GDI A LF KM + G +P V +Y L+ G
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453
Query: 247 CRKSQVNRAVDLL-----------------------------------EDMLNKGFVPDT 271
K VN A LL ++M+ G P+
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SYT L++ + K+ A LL RM+ GCNP++ YN V+ G +E R +A K+ +
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G LPN+++Y TL+ GLC G A K M + P+ +LI G C GK
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIV 418
DEA +L+E+ + G AP E T+ ++
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLI 660
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 192/394 (48%), Gaps = 23/394 (5%)
Query: 46 QQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKL 105
Q + SS SP V +++A D + F + S++P ++H+ + ++ ++ +L
Sbjct: 59 QWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRL 118
Query: 106 GRAKYFSLIDDILITL------KSEHYPVTP------------SLF---TYLIKIYAESN 144
R + F+ D I I + + E V SL+ T LI++ A+
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL-AKFE 177
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ + A ++ ML +P N ++ +L + + +R A + ++ + P+ +Y
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLINIL-SKKGKVREAELILSQIFQYDLSPDVFTY 236
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ C N ++ +A+ +F++M + G P+ +Y L+ GLC + +V+ A+D+LE+M+
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P +YT + +LC + EA +L+ RMK +GC P++ Y ++ G R G+
Sbjct: 297 KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEV 356
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M G +PN V+Y L+ LC G F A K M G + + +IK
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G C G +++A + E++LK G P T+ ++
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 5/324 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI +L FS I ++ + +IK ++A+ F M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPA--FDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
L+ P N ++ +T N A DL K ++G P+ +YN ++ F
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK---ENGCEPDEWTYNELVSGFSKW 491
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A F +M E G+ P+ SY L+ G + +V+ A+ LL+ M G P+ SY
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
++N L ++ + EA K+ +M +G P+++ Y T++ G CR GR A K+ DM
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
CLPNL +Y +L+ GLC +G D A+ ++ M KG +P +LI GF +G++D
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 671
Query: 395 ACGVLEELLKAGEAPHEDTWVMIV 418
A +L ++ G P+ T+ +++
Sbjct: 672 AFLLLRRMVDMGCKPNYRTYSVLL 695
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 146/297 (49%), Gaps = 3/297 (1%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+++TY + I A + A++ M + C+P + ++ L + L A
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL-SRLGKLEVA 357
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L+ K G++PNT +YN ++ C G S A +F+ M G + + ++Y +++G
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + +A+ L E ML G +P ++Y TL+N K + A +LL MK GC PD
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN +V GF + G+ A ++M G PN VSY L+ G G D+A ++
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G +P+ +A+I G + EA + +++++ G P+ T+ ++ +C
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 3/296 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
Y ++P +FTY LI + + D A F M++ C P + ++ L + +
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC-NEGRV 284
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D+ + + G+ P +Y + + A C A L +M +RG P+V++Y L
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GL R ++ A+ L ML +G VP+T++Y L+N LC + A K+ M+ G
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ YN ++ G C G A + E M G LP +V+Y TL+ G +G + A +
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ LM G P + L+ GF GK++ A +E+++ G P+ ++ ++
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI Y + A + M E C+P N ++ + L A
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF-SKWGKLESASF 499
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
F+ + G+ PN SY ++ +G + IA +L +M E G P+VESY ++ GL
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++++ + A + + M+ +G +P+ ++YTTL++ LCR + + A+K+ M+ + C P++
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G C+EG+A +A +L++M G P+ V++ +L+ G G D A ++ M
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+ G P++ L+KG + + C +LEE
Sbjct: 680 VDMGCKPNYRTYSVLLKG------LQKECLLLEE 707
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR-KSQVNRAVDLLEDM 262
Y I R F + +++ ++ N++ V + RILM CR + ++ R D L ++
Sbjct: 96 YWISKRPF-YKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEI 154
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
GF S TLL L + + + A L +M G P ++ +NT++ ++G+
Sbjct: 155 SGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKV 214
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +L + P++ +Y +L+ G C D+A M+ +G P+ L
Sbjct: 215 REAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL 274
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
I G CN G+VDEA +LEE+++ G P T+ + + +C
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
>gi|357499195|ref|XP_003619886.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494901|gb|AES76104.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 27/387 (6%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYA-SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P + ++I +Q +PL A EIF+ A S+ PN+ H+ Y +I LG + + D++
Sbjct: 10 NPTYLTQIIRTQKNPLKALEIFNEAKSKYPNYSHNGPVYATMINILGTSGRLKEMSDLIE 69
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+K + + L D A+ ++++ +FNC + N +L+++V +
Sbjct: 70 QMKEDSW------------------LVDEAISLYKNIPQFNCVNWTQSFNTLLKIMV-NE 110
Query: 180 NYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N L A LF +S+ V ++ N++M A C +A +F +M + P+ ES
Sbjct: 111 NKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQDCYPNRES 170
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLN----KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
Y I+M+GLC+ +++ A LL M KG D + Y TLL++LC K EA ++L
Sbjct: 171 YLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGKFDEAVEIL 230
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCD 353
++ KG YN + + C +G+ ++ K + + G +P+ SY ++ L +
Sbjct: 231 GKILRKGLKAPKRCYNRLDITQCGDGKDVEVTKRWIHEALVRGSVPSTASYTSMAVDLYE 290
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE-LLKAGEAPHED 412
+G D A K + M + F P S+ A + C VGKVDEA V+EE +++ P+
Sbjct: 291 EGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNAR 350
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +++ I + + E LN++ K
Sbjct: 351 VYTILLKNIRSVGNSTSVLESLNKMSK 377
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 24/263 (9%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNK-MFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P + + A C G + A + + M E +P+ Y IL++ + ++
Sbjct: 311 PKHSIFEAKVAALCKVGKVDEAIKVIEEDMVEVNCLPNARVYTILLKNIRSVGNSTSVLE 370
Query: 258 LLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L M K + D +Y LL LCR+ K +A +LL +M +K P YN ++ G
Sbjct: 371 SLNKMSKKVNCMADKETYCILLEMLCREGKYLQASQLLEQMSIKSYWPSANSYNLLIEGL 430
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV-AKKYMQLMISKGFSPH 375
C GR +A LEDM S G LP + + +L C+ GM V A+ + Q+ IS F+
Sbjct: 431 CSLGRQYEAVMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVSAETFNQMNISYCFTSF 490
Query: 376 FSVSHALIK--GFC-----------------NVGKVD--EACGVLEELLKAGEAPHEDTW 414
S +++ GF N+ D +A LE+++ G+ P W
Sbjct: 491 HCASDSVLTLMGFIFFLKRASPYGLSMGMGMNIAHKDLRKALMWLEDMISQGKLPEISVW 550
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
+ C M+ E N I
Sbjct: 551 NSLASSFCNSGMMKVSAETFNRI 573
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 23/290 (7%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S ++Y + + L D ++I +K + S+F + + D A+K
Sbjct: 277 STASYTSMAVDLYEEGKIDEADKVIIEMKDRRFRPKHSIFEAKVAALCKVGKVDEAIKVI 336
Query: 154 R-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E NC P + +L+ + + N L K + K + + ++Y I++ C
Sbjct: 337 EEDMVEVNCLPNARVYTILLKNIRSVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLC 396
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G A L +M + P SY +L++GLC + AV LEDM+++G +P+
Sbjct: 397 REGKYLQASQLLEQMSIKSYWPSANSYNLLIEGLCSLGRQYEAVMWLEDMISQGKLPEIS 456
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL---GFC-----------R 318
+ +L +S C ++ + + +M + C + VL GF
Sbjct: 457 VWNSLASSFCNSGMMKVSAETFNQMNISYCFTSFHCASDSVLTLMGFIFFLKRASPYGLS 516
Query: 319 EGRAID--------ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G ++ A LEDM S G LP + + +L C+ GM V+
Sbjct: 517 MGMGMNIAHKDLRKALMWLEDMISQGKLPEISVWNSLASSFCNSGMMKVS 566
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 6/328 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L ++ S + + + + E + P++ TY LI ++A +
Sbjct: 325 TYTVLIKALCGSERKS--EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLG 382
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
MLE P N ++ R + A D+ + + PNT++YN +++ +C
Sbjct: 383 QMLEKGLMPNVITYNALINGYCK-RGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-K 440
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
++ A + NKM ER V+PDV +Y L+ G CR + A LL M ++G VPD +Y
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T++++SLC+ K++ EA L ++ K P++V Y ++ G+C+ G+ +A +LE M S
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLS 560
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
CLPN +++ L+ GLC G A + M+ P S LI G D
Sbjct: 561 KNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDH 620
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A +++L +G P T+ + C
Sbjct: 621 AYRRFQQMLSSGTKPDAHTYTTFIQTYC 648
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 39/353 (11%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P FTY LI Y + D A K F+ M C+ ++ L R + A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR-IDEA 307
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DLF P ++Y ++++A C + S A L +M E+G+ P++ +Y +L+
Sbjct: 308 MDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDS 367
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + ++ +A +LL ML KG +P+ ++Y L+N C++ + +A ++ M+ + P+
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPN 427
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN ++ G+C+ A VL M LP++V+Y +L+ G C G FD A + +
Sbjct: 428 TRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 366 LMISKGFSP-----------------------------------HFSVSHALIKGFCNVG 390
LM +G P + + ALI G+C G
Sbjct: 487 LMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAG 546
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
KV+EA +LE++L P+ T+ ++ +C ++++ + ++VK++++
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ 599
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 198/444 (44%), Gaps = 20/444 (4%)
Query: 3 QRAFLRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSP 62
+R F S ++ + + P P +F S P + S+ S P SP
Sbjct: 39 RRQFCSVSPLIRNLPEDESDPTSVPHRLF-------SILSKPNWHKCPSLK-SMVPAISP 90
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
V L + DP A + S+ P ++HS +Y L+ L Y ++ I + +
Sbjct: 91 SHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMI 150
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
V +LF ++ + + N + E K + N +L L +
Sbjct: 151 KSCDSVADTLF--VLDLCRKMNKDES--------FELKYKLIIGCYNTLLNSLARF-GLV 199
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
++ + V PN +YN M+ +C G++ A + + E G+ PD +Y L
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSL 259
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C++ ++ A + ++M KG + ++YT L++ LC ++++ EA L +MK C
Sbjct: 260 IMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDC 319
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P + Y ++ C R +A ++++M G PN+ +Y L+ LC Q + A++
Sbjct: 320 YPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARE 379
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+ KG P+ +ALI G+C G +++A V+E + P+ T+ ++ C
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC 439
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDT 446
+ +G VLN++++ ++ D
Sbjct: 440 KRNVHKAMG-VLNKMLERKVLPDV 462
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 146/293 (49%), Gaps = 4/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY LI Y + + + AL M N +P + N +++ RN + A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RN-VHKA 446
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + VLP+ +YN ++ C +G+ AY L + M +RG++PD +Y ++
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V A DL + + K +P+ + YT L++ C+ K+ EA+ +L +M K C P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N ++ G C +G+ +A + E M P + + L+ L G FD A + Q
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P I+ +C G++ +A ++ ++ + G +P T+ ++
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 154/312 (49%), Gaps = 5/312 (1%)
Query: 113 LIDDILITLK-SEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
+I+D L ++ E + P+ TY LIK Y + N+ +A+ MLE P N
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYN 466
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+++ N+ A+ L + G++P+ +Y M+ + C + + A LF+ + +
Sbjct: 467 SLIDGQCRSGNF-DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+ V+P+V Y L+ G C+ +VN A +LE ML+K +P++L++ L++ LC KL+E
Sbjct: 526 KDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKE 585
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A L +M P + ++ ++G A + + M S+G P+ +Y T +
Sbjct: 586 ATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C +G A+ + M G SP +LIKG+ ++G+ + A VL+ + G P
Sbjct: 646 TYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEP 705
Query: 410 HEDTWVMIVPQI 421
+ T++ ++ +
Sbjct: 706 SQHTFLSLIKHL 717
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 162/369 (43%), Gaps = 57/369 (15%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY LI S D A + M + P P +++ L + + A
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR-VEEA 516
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DLF S + V+PN Y ++ +C G ++ A+ + KM + +P+ ++ L+ G
Sbjct: 517 CDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 246 LCRKSQVNRA---------VDL--------------------------LEDMLNKGFVPD 270
LC ++ A +DL + ML+ G PD
Sbjct: 577 LCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPD 636
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YTT + + CR+ +L++A ++ +MK G +PD+ Y++++ G+ GR A VL+
Sbjct: 637 AHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLK 696
Query: 331 DMPSNGCLPNLVSYRTLVG---------------GLC---DQGMFDVAKKYMQLMISKGF 372
M GC P+ ++ +L+ G+C + FD+ + ++ M+ G
Sbjct: 697 RMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGV 756
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEEL-LKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+P+ L+ G C +G + A V + + K G +P E + ++ C E+ +
Sbjct: 757 TPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAA 816
Query: 432 EVLNEIVKV 440
+V+++++ V
Sbjct: 817 KVVDDMICV 825
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 160/399 (40%), Gaps = 61/399 (15%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I L ++K D+ +L+ + ++T LI Y ++ + A M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Query: 157 LEFNCKPLPKQLNRILELLVT------------------------------HRNYLRPAF 186
L NC P N ++ L T HR F
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 187 D----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
D F+ G P+ +Y ++ +C G + A + KM E GV PD+ +Y L
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL 678
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++G + N A +L+ M + G P ++ +L+ L K KVKG
Sbjct: 679 IKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMK----------YGKVKGG 728
Query: 303 NPDIVHYNTVVLGFCREGRAID---ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
P G C ++ ++LE M +G PN SY L+ G+C+ G V
Sbjct: 729 EP----------GVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRV 778
Query: 360 AKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A+K M K G SP V +AL+ C + K +EA V+++++ G P ++ +++
Sbjct: 779 AEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILI 838
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIG 454
++ E E+ V +++ D +I+ G+G
Sbjct: 839 CRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVG 877
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 143/332 (43%), Gaps = 23/332 (6%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP 165
G+ K +L+++ ++ + + T S T LI + D A + F+ ML KP
Sbjct: 581 GKLKEATLLEEKMVKIDLQP---TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDA 637
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
++ L+ A D+ ++GV P+ +Y+ +++ + G + A+ +
Sbjct: 638 HTYTTFIQTYC-REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLK 696
Query: 226 KMFERGVMPDVESYRILMQ---------------GLCRKS---QVNRAVDLLEDMLNKGF 267
+M + G P ++ L++ G+C S + + V+LLE M+ G
Sbjct: 697 RMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGV 756
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDAC 326
P+ SY L+ +C LR A K+ M+ K G +P + +N ++ C+ + +A
Sbjct: 757 TPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAA 816
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
KV++DM G LP L S + L+ L +G + Q ++ G+ +I G
Sbjct: 817 KVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGV 876
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G V+ + + K G T+ +++
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 126/319 (39%), Gaps = 29/319 (9%)
Query: 76 LLAKEIFDYASRQ------PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVT 129
LL FD+A R+ + TY I R +D++ +K V+
Sbjct: 612 LLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKEN--GVS 669
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P LFTY LIK Y + + A + M + C+P +++ L+
Sbjct: 670 PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE---------- 719
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
K G P + MM + I L KM E GV P+ +SY LM G+C
Sbjct: 720 -MKYGKVKGGEPGVCVMSNMM-------EFDIVVELLEKMVEHGVTPNAKSYEKLMLGIC 771
Query: 248 RKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ A + + M K G P L + LL+ C+ +K EA K++ M G P +
Sbjct: 772 EIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQL 831
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
++ ++G V +++ G + ++++ ++ G+ QG+ + + +
Sbjct: 832 ESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNV 891
Query: 367 MISKGFSPHFSVSHALIKG 385
M G + LI+G
Sbjct: 892 MEKNGCTFSSQTYSLLIEG 910
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 175/360 (48%), Gaps = 3/360 (0%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
+ F +A ++ NF H ++TY+ LI L A + + + + P+ + ++K+
Sbjct: 109 QFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKV 168
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VL 198
++ + ++AL F + CKP N ++ L++ + +L+ G L
Sbjct: 169 LGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMI-LMLMQEGHHEKVHELYNEMCNEGDCL 227
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T +Y+ ++ AF G A +LF++M E G+ P + Y ++ + +V +A+ L
Sbjct: 228 PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGL 287
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+++M KG +YT L+ + + K+ EAY + M +GC PD+V N ++ +
Sbjct: 288 VQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHFS 377
GR DA K+ E+M S C PN+V+Y T++ L + + A + + M G P
Sbjct: 348 AGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI GFC +V++A +LEE+ + G AP + ++ + + E E+ E+
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 161/371 (43%), Gaps = 80/371 (21%)
Query: 96 STYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
+T L + KLGR K L+ + +K + +T +T LIK ++ + A F
Sbjct: 269 TTILGIYFKLGRVEKALGLVQE----MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFM 324
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCF 213
+ML+ CKP +N ++ LL L A LF+ PN +YN +++A F
Sbjct: 325 NMLKEGCKPDVVLINNLINLL-GKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFES 383
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
S A+ + KM E GV+P +Y IL+ G C+ ++V +A+ LLE+M KGF P +
Sbjct: 384 KARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAA 443
Query: 274 YTTLLNSLCRKKK-----------------------------------LREAYKLLCRMK 298
Y +L+N+L + K+ L EA L MK
Sbjct: 444 YCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMK 503
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL----------------- 341
GCNPD+ YN ++ G R G +A +L M NGC P+L
Sbjct: 504 KLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPK 563
Query: 342 ------------------VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
VSY T++G L GMF+ A K M+ M SKGF +++
Sbjct: 564 GAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Query: 384 KGFCNVGKVDE 394
+ VGK+DE
Sbjct: 624 EA---VGKIDE 631
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
R D +Y L+ L + +++M+ V + ++ L + K + +
Sbjct: 118 RNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK 177
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLV 348
A + ++K + C P YN+++L +EG ++ +M + G CLP+ V+Y L+
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALI 237
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G D A M G P + ++ + +G+V++A G+++E+ + G A
Sbjct: 238 AAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCA 297
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
T+ ++ + ++E+ + ++K K D ++ I L
Sbjct: 298 LTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 210/455 (46%), Gaps = 58/455 (12%)
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
+S + +P S V+KL ++P + ++++ + N RHS TY +L L +A
Sbjct: 63 LSKNLNPFISFEVVKKL---DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLH 119
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA----LKTFRSMLEFNCKPLPKQ 167
L + +KS+ L +L+ +AE A L++F +E C +
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSL 177
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN +++L + + A LF + +TK++NI++R C G A L M
Sbjct: 178 LNTLVKL-----DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKK 286
G PD+ +Y L+QG C+ +++N+A ++ +D+ + PD ++YT++++ C+ K
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 287 LREAYKLL-----------------------------------CRMKVKGCNPDIVHYNT 311
+REA LL +M GC PD+V + +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G+ ++ E+M + G PN +Y L+ LC++ A++ + + SK
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + + +I GFC GKV+EA ++EE+ K P + T+ +++ C M +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 432 EVLNEIVKVEIKGD--------TRIVEAGIGLEDY 458
+ +++V + D + +++AG+ E Y
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 1/306 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
R + M E C P + I++ + ++ A D+ +G+ PN YN +
Sbjct: 241 RVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH-EVANDILSRMPSYGLKPNVVCYNTV 299
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++ C A L +MF+ D ++ IL+ C+ V+R ++LLE ML G
Sbjct: 300 LKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 359
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+PD ++YTT++N C++ + EA LL M GC P+ + Y V+ G CR R +DA +
Sbjct: 360 IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQE 419
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
++ M GCLPN V++ TL+ +C +G+ + A + ++ M+ G SP +I G
Sbjct: 420 LISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLG 479
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
GK +EA +L ++ G P+ + + + +K+ ++ + I ++ D
Sbjct: 480 KAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAA 539
Query: 448 IVEAGI 453
+ A I
Sbjct: 540 LYNAVI 545
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 169/343 (49%), Gaps = 11/343 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEH--------YPVTPSLFTY--LIKIYAESNLP 146
+Y ++ L AK + ++++++ + H + TP L Y +I +
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 274
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ A M + KP N +L+ L + + A DL + + ++NI
Sbjct: 275 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW-EEAEDLLAEMFQEDCPLDDVTFNI 333
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC NG + L +M E G +PDV +Y ++ G C++ V+ AV LL++M G
Sbjct: 334 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P+T+SYT +L LCR ++ +A +L+ M +GC P+ V +NT++ C++G A A
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAI 453
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++L+ M NGC P+L+SY T++ GL G + A + + +MI+KG +P+ + ++
Sbjct: 454 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G+ D+ + + + A + ++ +C E ++
Sbjct: 514 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 556
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 151/322 (46%), Gaps = 3/322 (0%)
Query: 83 DYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
D SR P++ + + Y ++ L A+ + +D+L + E P+ F L+ +
Sbjct: 279 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 338
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
++ L DR ++ MLE C P ++ + A L K+ G PN
Sbjct: 339 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC-KEGLVDEAVMLLKNMSACGCKPN 397
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
T SY I+++ C A L + M ++G +P+ ++ L+ +C+K +A++LL+
Sbjct: 398 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLK 457
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
ML G PD +SY+T+++ L + K EA +LL M KG P+ + Y+++ REG
Sbjct: 458 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 517
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R ++ + + + Y ++ LC + D A + M+S G P+ S
Sbjct: 518 RTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 577
Query: 381 ALIKGFCNVGKVDEACGVLEEL 402
LI+G + G V EA +L EL
Sbjct: 578 ILIRGLASEGLVREAQDLLSEL 599
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 13/325 (4%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P+ +TY +++ L AL M C P + ILE + R
Sbjct: 103 PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF-RS 161
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + H G ++ + N+++ A C G + L K+ G PD+ SY +++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 245 GLCRKSQVNRAVDLLEDML----------NKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
GLC + + +L+ +M+ G PD Y T+++ +C+ A +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
RM G P++V YNTV+ G C R +A +L +M C + V++ LV C
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G+ D + ++ M+ G P +I GFC G VDEA +L+ + G P+ ++
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVK 439
+++ +C E E+++ +++
Sbjct: 402 TIVLKGLCRAERWVDAQELISHMIQ 426
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 13/263 (4%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
D ++ G +YN M+ +C G ++ A L + V P+ +Y +++ L
Sbjct: 62 DAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSL 118
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C + + A+ +L++M +G +L + CR R A + L + KGC D
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDS 178
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ N VV C +G + ++L +PS GC P++VSY ++ GLC +D ++ M
Sbjct: 179 GNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVE 238
Query: 367 MI----------SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
M+ G +P + +I G C G + A +L + G P+ +
Sbjct: 239 MVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNT 298
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ +C+ E E+ ++L E+ +
Sbjct: 299 VLKGLCSAERWEEAEDLLAEMFQ 321
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 242 LMQGLC---RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
L++ LC R + RA+D G ++Y ++ CR ++ A +L +
Sbjct: 50 LIRSLCAAGRTADAARALD------TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
V P+ Y +V C G DA VL++MP GC ++ C G F
Sbjct: 104 VP---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + +Q++ +KG + + ++ C G VDE +L +L G P ++ ++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220
Query: 419 PQICAGEEMEKLGEVLNEIVKV 440
+C + + + E++ E+V+V
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRV 242
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 174/366 (47%), Gaps = 44/366 (12%)
Query: 93 HSN-STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
H+N +T+ I I L RA + +D + +K+ + ++P++ TY L+ Y + +
Sbjct: 197 HTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA--WGISPNVVTYNTLVDGYCKRGSAGKM 254
Query: 150 LKT---FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
K + ML P N +++ N + A F+ K G+ PN +YN
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN-VAAAKKAFEEMQKQGLKPNIVTYNS 313
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED----- 261
++ C NG + A L++KM G+ P++ +Y L+ G C+K + A + +D
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373
Query: 262 ------------------------------MLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
ML++G +P+ +Y L+ LCRK+ L+ A
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 433
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+LL M+ KG D+V YN ++ G C+ ++ +A K+L +M + G PN V+Y TL+ G
Sbjct: 434 ELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGY 493
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C +G A M + P+ + LIKG+C + K++ A G+L E+L+ G P+
Sbjct: 494 CMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNR 553
Query: 412 DTWVMI 417
T+ ++
Sbjct: 554 TTYDIV 559
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY---TLFNKMFERGVMPDVES 238
L A D + G+ PN +YN ++ +C G Y +M + P+ +
Sbjct: 216 LNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVT 275
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C+ V A E+M +G P+ ++Y +L+N LC KL EA L +M
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+IV YN ++ GFC++ +A KV +D+ +PN++++ T++ C +GM +
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+ +G P+ S + LI G C + A +L E+ G T+ +++
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIK 443
+C ++ ++LNE+ + +K
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFNLGLK 480
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++K K + N ++NI + C G ++ A M G+ P+V +Y L+ G C
Sbjct: 187 VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYC 246
Query: 248 RKSQVNR---AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +++ML P+ +++ TL++ C+ + + A K M+ +G P
Sbjct: 247 KRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+IV YN+++ G C G+ +A + + M G PN+V+Y L+ G C + M A K
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF 366
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ + P+ + +I +C G ++E + +L G P+ T+ ++ +C
Sbjct: 367 DDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
++++ E+LNE+ +KGD
Sbjct: 427 QDLQAAKELLNEMENKGLKGD 447
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ +I Y + + + SML+ P N ++ L ++ L+ A
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQD-LQAA 432
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L G+ + +YNI++ C N A L N+MF G+ P+ +Y LM G
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C + ++ A+++ M + P+ ++Y L+ C+ KL A LL M KG NP+
Sbjct: 493 YCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552
Query: 306 IVHYNTVVLGFCREGRAID 324
Y+ V L +G + D
Sbjct: 553 RTTYDIVRLEMLEKGFSPD 571
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 1/300 (0%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N+ D + F +L P + +IL LV ++Y A L + G+ PN +
Sbjct: 44 NVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHY-PTAISLSRQMEVKGIEPNLVT 102
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
NI++ FC G ++ ++++ K+ + G PD + LM+GLC K +V R++ + ++
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+GF + +SY TLLN LC+ + R A KLL ++ + PD+V Y+T++ G C++
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +M + G PN+++Y TL+ G C G A + MI K +P+ + LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C GKV EA +L E+ G+ T+ ++ +C + ++K + ++ K I+
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQ 342
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R + + + +P + I++ L + + A+D F + G+ PN +Y+ ++
Sbjct: 189 AVKLLRMIEDRSTRPDVVMYSTIIDGLCKDK-IVNQAYDFFSEMNARGIFPNVITYSTLI 247
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A++L N+M + + P+V +Y IL+ LC++ +V A LL +M +KG
Sbjct: 248 WGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQP 307
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D ++Y ++L+ LC+ + L +A L +MK G P+ Y ++ G C+ GR +A K+
Sbjct: 308 ADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKL 367
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ + GC ++ +Y ++ GLC +GMFD A M G P+ +I+
Sbjct: 368 FQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFE 427
Query: 389 VGKVDEACGVLEELLKAG 406
+ D+A +L ++ G
Sbjct: 428 KDENDKAEKLLHGMIAKG 445
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + P+ Y+ ++ C + ++ AY F++M RG+ P+V +Y L
Sbjct: 187 RCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTL 246
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q+ A LL +M+ K P+ +Y L+++LC++ K++EA KLL M KG
Sbjct: 247 IWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQ 306
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D+V YN+V+ G C+ A + M G PN +Y L+ GLC G A+K
Sbjct: 307 PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQK 366
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
Q ++ KG + +I G C G D+A + ++ G P+ T+ +I+ +
Sbjct: 367 LFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLF 426
Query: 423 AGEEMEKLGEVLNEIV 438
+E +K ++L+ ++
Sbjct: 427 EKDENDKAEKLLHGMI 442
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 16/317 (5%)
Query: 121 LKSEHYP-------------VTPSLFTYLIKIYAESNLPDRALK--TFRSMLEFNCKPLP 165
+K +HYP + P+L T I I +L A +L+ +P
Sbjct: 76 VKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDT 135
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
LN +++ L + ++ + G N SY ++ C G+ A L
Sbjct: 136 ITLNTLMKGLCL-KGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLR 194
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
+ +R PDV Y ++ GLC+ VN+A D +M +G P+ ++Y+TL+ C
Sbjct: 195 MIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAG 254
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+L A+ LL M +K NP++ YN ++ C+EG+ +A K+L +M G ++V+Y
Sbjct: 255 QLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYN 314
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+++ GLC D A M G P+ ALI G C G++ A + + LL
Sbjct: 315 SVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVK 374
Query: 406 GEAPHEDTWVMIVPQIC 422
G T+ +++ +C
Sbjct: 375 GCCIDVRTYNVMISGLC 391
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY LI + + A M+ N P N +++ L ++ A
Sbjct: 236 IFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL-CKEGKVKEA 294
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L H G + +YN ++ C + ++ A LF KM + G+ P+ +Y L+ G
Sbjct: 295 KKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDG 354
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A L + +L KG D +Y +++ LC++ +A + +M+ GC P+
Sbjct: 355 LCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPN 414
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
V ++ ++ + A K+L M + G L
Sbjct: 415 AVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 246 LCRKSQ-------VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
LC SQ V+ V +L P + + +L L + K A L +M+
Sbjct: 33 LCFHSQPPSIENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQME 92
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
VKG P++V N ++ FC G+ + VL + G P+ ++ TL+ GLC +G
Sbjct: 93 VKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVK 152
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + ++++GF + L+ G C +G+ A +L + P + I+
Sbjct: 153 RSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTII 212
Query: 419 PQICAGEEMEKLGEVLNEI 437
+C + + + + +E+
Sbjct: 213 DGLCKDKIVNQAYDFFSEM 231
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H++ TY ILI R L +L + Y + L+ Y S A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M +P N ++ L H N A L G P+ +Y +++ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A+ L NKM + + P V Y ++ GLC+ ++ A++L ++M KG P+ +
Sbjct: 233 KRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVV 292
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NPD+ ++ ++ F +EG+ ++A K+ ++M
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++V+Y +L+ G C D AK+ + M+SK P LIKGFC +V
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
DE + E+ + G + T+ ++ + + + E+ E+V
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNL 145
QPN N+ L L ++ +LID ++ P L TY + + +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK------GCQPDLVTYGVVVNGLCKRGD 236
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A M + +P I++ L ++ ++ A +LFK G+ PN +Y+
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNK-HMDDALNLFKEMETKGIRPNVVTYS 295
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G S A L + M ER + PDV ++ L+ ++ ++ A L ++M+ +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P ++Y++L+N C +L EA ++ M K C PD+V Y+T++ GFC+ R +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M G + N V+Y TL+ GL G D+A++ + M+S G P+ + L+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L ++ P T+ +++ +C ++E
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ + + +TY I I S LP AL M++ +P L+
Sbjct: 98 DVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSS 156
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L G PNT ++N ++ + S A L ++M +
Sbjct: 157 LLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK 215
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y +++ GLC++ + A LL M P L YTT+++ LC+ K + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M+ KG P++V Y++++ C GR DA ++L DM P++ ++ L+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K M+ + P +LI GFC ++DEA + E ++ P
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ ++ C + +++ E+ E+ + + G+T
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI + + D A + F M+ +C P + +++ + +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR-VDEG 415
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +Y +++ GD +A +F +M GV P++ +Y L+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + P +Y ++ +C+ K+ + + L C + +KG PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ GFCR+G +A + ++M +G LPN Y TL+ G + + + ++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M S GF+ S + L+ + G++D++
Sbjct: 596 EMRSCGFAGDAS-TIGLVTNMLHDGRLDKS 624
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + +++L + N L + G+ N +Y
Sbjct: 63 DDAVALFGEMVK--SRPFPSIIEFSKLLSA-IAKMNKFDVVISLGEQMQNLGMPHNHYTY 119
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ FC + +A + KM + G P++ + L+ G C +++ AV L++ M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ P+T+++ TL++ L K EA L+ RM KGC PD+V Y VV G C+ G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P ++ Y T++ GLC D A + M +KG P+ +LI
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
CN G+ +A +L ++++ P T+ ++ ++ + ++ +E+VK I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 7/355 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
Y +I L + K+ +DD L K E + P++ TY LI A +
Sbjct: 259 YTTIIDGLCKNKH---MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E P + +++ V L A L+ K + P+ +Y+ ++ FC +
Sbjct: 316 DMIERKINPDVFTFSALIDAFV-KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A +F M + PDV SY L++G C+ +V+ ++L +M +G V +T++Y
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TTL+ L + A ++ M G P+I+ YNT++ G C+ G+ A V E +
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+ P + +Y ++ G+C G + + KG P + +I GFC G +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
A + +E+ + G P+ + ++ + E E++ E+ GD +
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 3/318 (0%)
Query: 122 KSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E + P ++T +I ++ D AL F+ M +P + ++ L +
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A L + + P+ +++ ++ AF G + A L+++M +R + P + +Y
Sbjct: 306 RW-SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ G C +++ A + E M++K PD +SY+TL+ C+ K++ E +L M
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G + V Y T++ G + G A ++ ++M S+G PN+++Y TL+ GLC G +
Sbjct: 425 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + P + +I+G C GKV++ + L G P + ++
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 420 QICAGEEMEKLGEVLNEI 437
C E+ + E+
Sbjct: 545 GFCRKGSKEEADALFKEM 562
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 133/272 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF K P+ ++ ++ A + +L +M G+ + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ P+ ++ ++LLN C K++ EA L+ +M V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+LV+Y +V GLC +G D+A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M P + +I G C +D+A + +E+ G P+ T+ ++ +
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +L+++++ +I D A I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ AV L +M+ P + ++ LL+++ + K L +M+ G + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR + A VL M G PN+V+ +L+ G C A + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G+ P+ + LI G K EA +++ ++ G P T+ ++V +C
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC 232
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H++ TY ILI R L +L + Y + L+ Y S A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M +P N ++ L H N A L G P+ +Y +++ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A+ L NKM + + P V Y ++ GLC+ ++ A++L ++M KG P+ +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NPD+ ++ ++ F +EG+ ++A K+ ++M
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++V+Y +L+ G C D AK+ + M+SK P + LIKGFC +V
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+E V E+ + G + T+ +++ + + + E+ E+V
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNL 145
QPN N+ L L ++ +LID ++ P L TY + + +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK------GCQPDLVTYGVVVNGLCKRGD 236
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A M + +P N I++ L ++ ++ A +LFK G+ PN +Y+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTYS 295
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G S A L + M ER + PDV ++ L+ ++ ++ A L ++M+ +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P ++Y++L+N C +L EA ++ M K C PD+V YNT++ GFC+ R +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+V +M G + N V+Y L+ GL G D+A++ + M+S G P+ + L+ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L ++ P T+ +++ +C ++E
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 142/270 (52%), Gaps = 4/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI + + D A + F M+ +C P N +++ ++ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR-VEEG 415
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F+ + G++ NT +YNI+++ GD +A +F +M GV P++ +Y L+ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + P +Y ++ +C+ K+ + + L C + +KG PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ GFCR+G +A + ++M +G LPN Y TL+ G + + + ++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M S GF+ S + L+ + G++D++
Sbjct: 596 EMRSCGFAGDAS-TIGLVTNMLHDGRLDKS 624
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ + + +TY I I S LP AL M++ +P L+
Sbjct: 98 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSS 156
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L G PNT ++N ++ + S A L ++M +
Sbjct: 157 LLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y +++ GLC++ + A +LL M P L Y T+++ LC+ K + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M+ KG P++V Y++++ C GR DA ++L DM P++ ++ L+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K M+ + P +LI GFC ++DEA + E ++ P
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ EV E+ + + G+T
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + +++L + N L + G+ N +Y
Sbjct: 63 DDAVALFGEMVK--SRPFPSIIEFSKLLSA-IAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ FC + +A + KM + G P++ + L+ G C +++ AV L++ M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ P+T+++ TL++ L K EA L+ RM KGC PD+V Y VV G C+ G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P ++ Y T++ GLC D A + M +KG P+ +LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
CN G+ +A +L ++++ P T+ ++ ++ + ++ +E+VK I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 134/272 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF K P+ ++ ++ A + +L +M G+ + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ P+ ++ ++LLN C K++ EA L+ +M V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+LV+Y +V GLC +G D+A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M P + + +I G C +D+A + +E+ G P+ T+ ++ +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +L+++++ +I D A I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ AV L +M+ P + ++ LL+++ + K L +M+ G + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR + A VL M G PN+V+ +L+ G C A + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G+ P+ + LI G K EA +++ ++ G P T+ ++V +C + +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 431 GEVLNEI 437
+LN++
Sbjct: 241 FNLLNKM 247
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 174/361 (48%), Gaps = 4/361 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+R+ N+ H STY+ LI L +Y + I +++ VTP + +I+
Sbjct: 104 QFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIR 163
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P N ++ +++ H +L+ G
Sbjct: 164 MLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMI-IMLMHEGEYEKVHELYNEMSNEGQC 222
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M + G+ P + Y +LM L + V+ A+
Sbjct: 223 FPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALG 282
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M ++ PD +YT L+ L + +L EAY M+ +GC PD V N ++
Sbjct: 283 LFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLG 342
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ E+M + C+P++V+Y T++ L + + + + M G SP
Sbjct: 343 KAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSP 402
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
LI GFC + ++A +LEE+ + G P + ++ + + + E+ E
Sbjct: 403 FTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQE 462
Query: 437 I 437
+
Sbjct: 463 L 463
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P +FTY LI+ ++ D A F M C+P +N ++ L L
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFL-GKAGRL 347
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A LF+ +P+ +YN +++A F +S + F +M G+ P +Y I
Sbjct: 348 DDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSI 407
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ ++ +A+ LLE+M KGF P +Y +L+++L + K+ A +L +K
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENC 467
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y ++ + GR DA + ++M GC PN+ +Y L+ GL GM D A
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ M G P + + ++ G D A G+L + ++ P ++ ++ +
Sbjct: 528 TTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGAL 587
Query: 422 C-AG--EEMEKLGEVLNEI 437
AG EE KL + +N I
Sbjct: 588 SHAGMFEEAAKLMKEMNAI 606
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 138/333 (41%), Gaps = 38/333 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+A + ++ E L +I ++ D A+K F M
Sbjct: 298 TYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEM 357
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I++ L ++ + F+ G+ P+ +Y+I++ FC
Sbjct: 358 ETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNR 417
Query: 217 ISIAYTLFNKMFERGVMP-----------------------------------DVESYRI 241
A L +M E+G P Y +
Sbjct: 418 TEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAV 477
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ L + +++ AVDL ++M G P+ +Y L++ L R L EA + RM+ G
Sbjct: 478 MIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHG 537
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI YN ++ + G A +L +M + P+ VSY T++G L GMF+ A
Sbjct: 538 CIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAA 597
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
K M+ M + GF ++++ +GKVD+
Sbjct: 598 KLMKEMNAIGFDYDLITYSSILEA---IGKVDQ 627
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+ Y LI LG+AK + L +++ LK + ++ +IK ++ D A+ F
Sbjct: 438 AAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDE 497
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M C P N ++ L L A + HG +P+ SYNI++ A G
Sbjct: 498 MNRLGCTPNVYAYNALMSGL-ARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTG 556
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
A + M + + PD SY ++ L A L+++M GF D ++Y+
Sbjct: 557 GPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYS 616
Query: 276 TLLNSL 281
++L ++
Sbjct: 617 SILEAI 622
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 3/332 (0%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
Y P TY ++ +S AL FR M E N K Q + +++ L ++
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF- 261
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A LF G+ + +Y+ ++ C +G + +M R ++PDV ++ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ ++ ++ A +L +M+ +G PDT++Y +L++ C++ L EA ++ M KGC
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDIV Y+ ++ +C+ R D ++ ++ S G +PN ++Y TLV G C G + AK+
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
Q M+S+G P L+ G C+ G++++A + E++ K+ + +I+ +C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ + + +K D IG
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL M+E+ +P +L L N A DLF+ + + + Y+I++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS-ALALDLFRKMEERNIKASVVQYSIVI 252
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C +G A +LFN+M +G+ DV +Y L+ GLC + + +L +M+ + +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++++ L++ ++ KL EA +L M +G PD + YN+++ GFC+E +A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M S GC P++V+Y L+ C D + + + SKG P+ + L+ GFC
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK++ A + +E++ G P T+ +++ +C E+ K E+ ++ K +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT----- 487
Query: 449 VEAGIGLEDYLI 460
GIG+ + +I
Sbjct: 488 --LGIGIYNIII 497
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 128/226 (56%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++P+ +++ ++ F G + A L+N+M RG+ PD +Y L+ G C+++ ++ A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ + M++KG PD ++Y+ L+NS C+ K++ + +L + KG P+ + YNT+VLGF
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G+ A ++ ++M S G P++V+Y L+ GLCD G + A + + M +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + +I G CN KVD+A + L G P T+ +++ +C
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + A K G P+T +++ ++ FC G +S A L ++M E PD+ + L+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC K +V+ A+ L++ M+ GF PD ++Y +LN LC+ A L +M+ +
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y+ V+ C++G DA + +M G ++V+Y +L+GGLC+ G +D K +
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ MI + P ALI F GK+ EA + E++ G AP T+ ++ C
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 7/371 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESN 144
+ N + S Y I+I L + F DD L E + + TY LI
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSF---DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D K R M+ N P + ++++ V L A +L+ G+ P+T +Y
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMITRGIAPDTITY 353
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ FC + A +F+ M +G PD+ +Y IL+ C+ +V+ + L ++ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG +P+T++Y TL+ C+ KL A +L M +G P +V Y ++ G C G
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A ++ E M + + Y ++ G+C+ D A + KG P + +I
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G + EA + ++ + G P + T+ +++ G + E++ E+
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Query: 445 DTRIVEAGIGL 455
D+ ++ I +
Sbjct: 594 DSSTIKMVIDM 604
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 1/298 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ F SM++ P P NR+ + + Y K +G+ + + IM+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY-DLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+C + A+++ + ++ G PD ++ L+ G C + +V+ AV L++ M+
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++ +TL+N LC K ++ EA L+ RM G PD V Y V+ C+ G + A +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
M ++V Y ++ LC G FD A M KG +LI G CN
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
GK D+ +L E++ P T+ ++ ++ + E+ NE++ I DT
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 48/269 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP- 184
+ P TY LI + + N A + F M+ C+P I+ + +Y +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP------DIVTYSILINSYCKAK 399
Query: 185 ----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
LF+ G++PNT +YN ++ FC +G ++ A LF +M RGV P V +Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 241 ILMQGLCRKSQVNRAVDLLEDML-----------------------------------NK 265
IL+ GLC ++N+A+++ E M +K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD ++Y ++ LC+K L EA L +MK GC PD YN ++ I +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+++E+M G + + + ++ L D+
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H + SY +R + ++ A LF M + +P + L + R Q
Sbjct: 27 HYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 86
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ + + M G D + T ++N CRKKKL A+ +L R G PD + ++T+
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V GFC EGR +A +++ M P+LV+ TL+ GLC +G A + M+ GF
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P ++ C G A + ++ + + +++ +C +
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 433 VLNEIVKVEIKGDTRIVEAGIG 454
+ NE+ IK D + IG
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIG 288
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+L ++ + ++ + S P PS+ TY L+ ++ ++AL+ F
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + + L + I+ + + + + A+ LF S GV P+ +YN+M+ C
Sbjct: 480 KM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G +S A LF KM E G PD +Y IL++ S + +V+L+E+M GF D+ +
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 275 TTLLNSLCRKK 285
+++ L ++
Sbjct: 599 KMVIDMLSDRR 609
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 161/350 (46%), Gaps = 1/350 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY I I R SL +L + Y + L+ Y S A+
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E KP ++ L H N A L + G P+ +Y ++ C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A +L KM + + DV Y ++ GLC+ ++ A++L +M NKG PD
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NP++V ++ ++ F +EG+ ++A K+ ++M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++ +Y +L+ G C D AK +LMISK P+ LIKGFC +V
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+E + E+ + G + T+ ++ + + V ++V V +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++ L+TY I + + AL M++ +P L+ +L H + A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC-HSKRISDA 172
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G P+T ++ ++ + S A L ++M +RG PD+ +Y ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ ++ A+ LL+ M D + Y T+++ LC+ K + +A L M KG PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y++++ C GR DA ++L DM PN+V++ L+ +G A+K
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI + P +LI GFC ++DEA + E ++ P+ T+ ++ C +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+E+ E+ E+ + + G+T
Sbjct: 413 RVEEGMELFREMSQRGLVGNT 433
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 5/301 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + N++L V N L + G+ + +Y
Sbjct: 65 DDAVDLFGDMVK--SRPFPSIVEFNKLLSA-VAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I + FC +S+A + KM + G PD+ + L+ G C +++ AV L++ M+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ PDT ++TTL++ L K EA L+ +M +GC PD+V Y TVV G C+ G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L+ M ++V Y T++ GLC D A M +KG P +LI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN G+ +A +L ++++ P+ T+ ++ ++ + ++ +E++K I
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 445 D 445
D
Sbjct: 362 D 362
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY ++ + D AL + M + + N I++ L ++ ++ A +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK-HMDDALN 279
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +Y+ ++ C G S A L + M ER + P+V ++ L+
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P++V
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ GFC+ R + ++ +M G + N V+Y TL+ G D A+ + M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ + L+ G C GK+ +A V E L ++ P T+ +++ +C ++
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 428 EKLGEVL 434
E E+
Sbjct: 520 EDGWELF 526
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 3/346 (0%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G KY + D + + + ++ + P +FTY LI A + M+E P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++ V L A L+ K + P+ +Y+ ++ FC + + A +
Sbjct: 327 NVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F M + P+V +Y L++G C+ +V ++L +M +G V +T++YTTL++ +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ A + +M G +P+I+ YN ++ G C+ G+ A V E + + P++ +
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C G + + + KG SP+ + +I GFC G +EA +L+++
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
+ G P+ T+ ++ + E E++ E+ GD +
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 228 FERGVMPDVESYR-ILMQGLCRKSQVNRAVDLLEDM---------------------LNK 265
+ER YR IL L +V+ AVDL DM +NK
Sbjct: 39 WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98
Query: 266 --------------GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
G D +Y+ +N CR+ +L A +L +M G PDIV ++
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C R DA +++ M G P+ ++ TL+ GL A + M+ +G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P ++ G C G +D A +L+++ K + I+ +C + M+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD--- 275
Query: 432 EVLNEIVKVEIKG 444
+ LN +++ KG
Sbjct: 276 DALNLFTEMDNKG 288
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ ++ +A+ F + +P N ++E + +
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKVEDG 522
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++LF + GV PN +YN M+ FC G A +L KM E G +P+ +Y L++
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+++M + GF D + + N L
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 136/257 (52%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+++ A + + G P+ +YNI++ C NG + A + N+M +RG +PD+
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ L+ LC +++ A+DL + KG PD ++ L+N+LC+ A +L M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K GC PD V YNT++ C G+ A +L+DM S GC + ++Y T++ GLC +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A++ M +G S + + LI G C K+D+A G++ +++ G P+ T+ I
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSI 537
Query: 418 VPQICAGEEMEKLGEVL 434
+ C +++K ++L
Sbjct: 538 LTHYCKQGDIKKAADIL 554
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 181/394 (45%), Gaps = 39/394 (9%)
Query: 53 SNSKSPIGSPCRVQKLIA--SQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
++ P+ + + Q L A Q DP A + + A + +F Y +I KLG
Sbjct: 30 ASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGA 89
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
L+ ++ ++ E + V + + Y L D A+
Sbjct: 90 LDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV-------------------- 129
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L++ N L+P F G+ +T YN ++ + + +++++M R
Sbjct: 130 --DLIL---NQLQPLF---------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ PDV ++ LM+ LCR QV AV +LE+M ++G PD ++TTL+ + + A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ RM GC+ V N ++ G+C+ GR DA ++ ++G P+ ++Y T V G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC A K M +M+ +G P + ++ C G+++EA G+L +++ G P
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
T+ ++ +C G +E E L+ +V +KG
Sbjct: 356 ITTFNTLIAALCTGNRLE---EALDLARQVTVKG 386
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 3/282 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ ++ + A M++ C P N ++ L T N L A D
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG-NRLEEALD 377
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + GV P+ ++NI++ A C GD +A LF +M G PD +Y L+ LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +A+DLL+DM + G T++Y T+++ LC+K ++ EA ++ +M ++G + + +
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C++ + DA ++ M S G PN ++Y +++ C QG A ++ M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ GF LI G C G+ A VL + G P
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 163/342 (47%), Gaps = 1/342 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ L+ L RA +L + S + FT L++ + E + AL+ M
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE C +N ++ + A + G P+ +YN + C N
Sbjct: 243 LEMGCSATKVTVNVLINGYC-KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A + + M + G PDV +Y I++ LC+ Q+ A +L M+++G +PD ++ T
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ +LC +L EA L ++ VKG +PD+ +N ++ C+ G A ++ E+M ++G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P+ V+Y TL+ LC G A ++ M S G + +I G C +++EA
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V +++ G + + T+ ++ +C ++++ ++N+++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 153/322 (47%), Gaps = 10/322 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFN 160
KLGR ++D L ++ E P TY + +++ ALK M++
Sbjct: 263 KLGR------VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P N ++ L + L A + G LP+ ++N ++ A C + A
Sbjct: 317 HDPDVFTYNIVVNCLCKN-GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L ++ +GV PDV ++ IL+ LC+ + A+ L E+M N G PD ++Y TL+++
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC KL +A LL M+ GC + YNT++ G C++ R +A +V + M G N
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++ TL+ GLC D A + MIS+G P+ ++++ +C G + +A +LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 401 ELLKAGEAPHEDTWVMIVPQIC 422
+ G T+ ++ +C
Sbjct: 556 TMTANGFEVDVVTYGTLINGLC 577
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP TY LI +AL + M C N I++ L + + A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIEEAE 481
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F G+ N ++N ++ C + I A+ L N+M G+ P+ +Y ++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHY 541
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + +A D+LE M GF D ++Y TL+N LC+ + + A K+L M++KG P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYMQ 365
YN V+ R DA + +M G P+ ++Y+ + GLC G A +M
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M+ KGF P FS L +G N+G D
Sbjct: 662 EMVDKGFIPEFSSFRMLAEGLLNLGMDD 689
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN N TY ++ + DIL T+ + + V + LI ++
Sbjct: 528 QPN----NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
ALK R M +P PK N +L+ L RN +R A LF+ + G P+ +Y I+
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLF-RRNNIRDALSLFREMAEVGEPPDALTYKIV 642
Query: 208 MRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGL 246
R C G I A+ +M ++G +P+ S+R+L +GL
Sbjct: 643 FRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 140/256 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P+ SYN +M + GD+ + L + M GV PDV +Y +
Sbjct: 141 IRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 200
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ +++ A +L ++ML G VP +++TTL++ C+ ++ A ++ +M +
Sbjct: 201 LINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 260
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ YNT++ G C++G A ++ +M G P+ ++Y TL+ G C +G D A
Sbjct: 261 LLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAF 320
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 321 EHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEF 380
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ ++L E+
Sbjct: 381 CKKGDVWTGSKLLKEM 396
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + KYF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 100 LMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPS 159
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + + L F L + H GV P+ +Y++++ C + A LF
Sbjct: 160 VVSYNTLMSGYIRLGD-LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELF 218
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M G++P ++ L+ G C+ +V+ A+++ + ML++ +PD ++Y TL+ LC+K
Sbjct: 219 DEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 278
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L++A+ L+ M +KG PD + Y T++ G C+EG A + + M + V+Y
Sbjct: 279 GBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 338
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V +L+E+ +
Sbjct: 339 TALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQR 398
Query: 405 AGEAP 409
G P
Sbjct: 399 DGHVP 403
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 57 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK-YFKLVWGFYQE 115
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC G+I +A ++F+ + + G+ P V SY LM G R
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGD 175
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ EA +L M V G P V + T
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTT 235
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S LP+L++Y TL+ GLC +G A + M KG
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKG 295
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G +D A + +++ + + ++ +C
Sbjct: 296 XKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 355
Query: 432 EVLNEIVKVEIKGDTR 447
++L E++ V K DTR
Sbjct: 356 KMLREMLSVGXKPDTR 371
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + ++ D A++ ++ ML + P N ++ L B L+ A L
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGB-LKQAHVLIXEM 291
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P+ +Y ++ C GD+ A+ +M + + D +Y L+ GLC++ +
Sbjct: 292 SLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 351
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L +ML+ G PDT +YT ++N C+K + KLL M+ G P +V YN +
Sbjct: 352 VDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
Query: 313 VLG 315
+ G
Sbjct: 412 MNG 414
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 138/269 (51%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N + AF + K G P+T ++ ++R G I A LF+KM G PDV
Sbjct: 108 HLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVV 167
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLC+ + A+ LL M+ K P+ +Y T+++SLC+ +++ EA+ L M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
KG +PDI YN+++ C +L +M + +P++VS+ T+V LC +G
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + MI +G P+ AL+ G C + ++DEA V + ++ G P+ ++ +
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ C + ++K + E+ + E+ DT
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDT 376
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 165/343 (48%), Gaps = 5/343 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
FS++ IL K H P T + T + IY E + + AL F M+ +P
Sbjct: 116 FSVLAKIL---KLGHQPDTATFTTLIRGIYVEGKIGE-ALHLFDKMIGEGFRPDVVTYGT 171
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L N A L S + PN +YN ++ + C + ++ A+ LF++M +
Sbjct: 172 LINGLCKVGNT-SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ PD+ +Y L+ LC + LL +M++ +PD +S+ T++++LC++ K+ EA
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+ ++ +M +G P++V Y ++ G C +A KV + M GC+PN++SY TL+ G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C D A M + P LI G C+V ++ +A + E++ + P+
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
T+ +++ +C + + +L I + D ++ I
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 159/345 (46%), Gaps = 38/345 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + A++ SM++ NC+P N I++ L R + AF+
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ-VTEAFN 222
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +YN ++ A C + TL N+M + +MPDV S+ ++ LC
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V A D+++ M+ +G P+ ++YT L++ C ++ EA K+ M KGC P+++
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342
Query: 308 HYNTVVLGFCR------------------------------EG-----RAIDACKVLEDM 332
YNT++ G+C+ G R DA + +M
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ +PNLV+YR L+ LC A ++ + P V++ I G C G++
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ A + L G P T+ +++ +C +++ ++ E+
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 159/349 (45%), Gaps = 38/349 (10%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P +FTY I+A NL + M++ P N +++ L + A
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK-EGKVTEA 290
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ + GV PN +Y +M C ++ A +F+ M +G MP+V SY L+ G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------ 293
C+ ++++A+ L +M + +PDT++Y+TL++ LC ++L++A L
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410
Query: 294 ----------LCRMK-----------VKGCN--PDIVHYNTVVLGFCREGRAIDACKVLE 330
LC+ + ++G N PDI N + G CR G A +
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 470
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
++ S G P++ +Y ++ GLC +G+ D A K + M G + + + + + +GF
Sbjct: 471 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 530
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ A +L+E++ G + T + V + + L ++L E V+
Sbjct: 531 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 180/374 (48%), Gaps = 11/374 (2%)
Query: 81 IFDYASRQPNFRHSNSTYLILIL-----KLGRAKY-FSLIDDILITLKSEHYPVTPSLFT 134
+F +++ +F Y + IL L R + FS++ IL K P T + T
Sbjct: 86 VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL---KLGLQPDTATFTT 142
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
+ + E + D AL F M+ +P ++ L N A L +S +
Sbjct: 143 LIRGLCVEGKIGD-ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT-NAAIRLLRSMEQ 200
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
P+ Y ++ + C + ++ A+ LF+KM +G+ PD+ +Y L+ LC +
Sbjct: 201 GNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKH 260
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
LL M+N +PD + ++T++++LC++ K+ EA+ ++ M ++G P++V YN ++
Sbjct: 261 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 320
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C + +A KV + M NG PN++SY TL+ G C D A + M K P
Sbjct: 321 GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 380
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ + L+ G C+VG++ +A + E++ G+ P T+ +++ +C +++ +L
Sbjct: 381 NTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 440
Query: 435 NEIVKVEIKGDTRI 448
I + D +I
Sbjct: 441 KTIEGSNMDPDIQI 454
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 157/320 (49%), Gaps = 3/320 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + + A++ RSM + NC+P I++ L R + AF+
Sbjct: 170 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ-VTEAFN 228
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +Y ++ + C + TL N+M +MPDV + ++ LC
Sbjct: 229 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 288
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A D+++ M+ +G P+ ++Y L++ C + ++ EA K+ M G P+++
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 348
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G+C+ R A + E+M +PN V+Y TL+ GLC G A M
Sbjct: 349 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM 408
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
++ G P + L+ C +DEA +L+ + + P + +++ +C E+
Sbjct: 409 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 468
Query: 428 EKLGEVLNEIVKVEIKGDTR 447
E ++ + + ++ + R
Sbjct: 469 EAARDIFSNLSSKGLRPNVR 488
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + +G PN SYN ++ +C + A LF +M ++ ++P+ +Y LM
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 390
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ A+ L +M+ G +PD +Y LL+ LC+K L EA LL ++ +P
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI Y V+ G CR G A + ++ S G PN+ +Y ++ GLC +G+ D A K
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G SP + + +G + A +L+E+L G + T ++V +C
Sbjct: 511 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 570
Query: 425 EEMEKLGEVLNEIVK 439
+ + + ++L+E V+
Sbjct: 571 KLDQSVKQILSEFVQ 585
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
++P +FTY I++ NL + T N K +P + + +++ L + A
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC-KEGKITEA 296
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ GV PN +YN +M C ++ A +F+ M G P+V SY L+ G
Sbjct: 297 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 356
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++++A L E+M K +P+T++Y TL++ LC +L++A L M G PD
Sbjct: 357 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPD 416
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ C++ +A +L+ + + P++ Y ++ G+C G + A+
Sbjct: 417 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFS 476
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P+ +I G C G +DEA + E+ G +P T+ I + +
Sbjct: 477 NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNK 536
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
E + ++L E++ D
Sbjct: 537 EALRAIQLLQEMLARGFSAD 556
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P++ +Y LI Y + D+A F M + P N ++ L H L
Sbjct: 340 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLC-HVGRL 398
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A LF HG +P+ +Y I++ C + A L + + PD++ Y I+
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G+CR ++ A D+ ++ +KG P+ +YT ++N LCR+ L EA KL M GC
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+PD YNT+ G + A+ A ++L++M + G ++ + LV LCD + K+
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 578
Query: 363 YM 364
+
Sbjct: 579 IL 580
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + FN+M P + L+ + + Q L M + G PD + L+N
Sbjct: 51 ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 110
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
S C + A+ +L ++ G PD + T++ G C EG+ DA + + M G P
Sbjct: 111 SFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 170
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V+Y TL+ GLC G + A + ++ M P V ++I C +V EA +
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 230
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+++ G +P T+ ++ +C E + + +LN+++ +I D I
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 279
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 210/455 (46%), Gaps = 58/455 (12%)
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
+S + +P S V+KL ++P + ++++ + N RHS TY +L L +A
Sbjct: 63 LSKNLNPFISFEVVKKL---DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLH 119
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA----LKTFRSMLEFNCKPLPKQ 167
L + +KS+ L +L+ +AE A L++F +E C +
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSL 177
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN +++L + + A LF + +TK++NI++R C G A L M
Sbjct: 178 LNTLVKL-----DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKK 286
G PD+ +Y L+QG C+ +++N+A ++ +D+ + PD ++YT++++ C+ K
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 287 LREAYKLL-----------------------------------CRMKVKGCNPDIVHYNT 311
+REA LL +M GC PD+V + +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G+ ++ E+M + G PN +Y L+ LC++ A++ + + SK
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + + +I GFC GKV+EA ++EE+ K P + T+ +++ C M +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 432 EVLNEIVKVEIKGD--------TRIVEAGIGLEDY 458
+ +++V + D + +++AG+ E Y
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 172/350 (49%), Gaps = 4/350 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+ +E+ + PN +++ T + K+GR + D ++T K E P ++ L
Sbjct: 167 IMREMRERGGIAPN-QYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKP-EAVMYNAL 223
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I Y + D AL M+E N ++ L A++L + G
Sbjct: 224 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKG 282
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P+ +YNI++ C G++ A +F M RGV V +Y L+ L +K QV
Sbjct: 283 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L ++ + +G PD + Y L+NS + A++++ M+ K PD V YNT++ G
Sbjct: 343 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 402
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR +A K++++M G P+LV+Y TL+ G +G A + M++KGF+P
Sbjct: 403 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 462
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ALI+G C G+ D+A +++E+++ G P + T++ ++ + +E
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 5/333 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRIL 172
DI+ ++ E + P+ +TY +I + + D A+K F ML + KP N ++
Sbjct: 166 DIMREMR-ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 224
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A + GV +YN+++ A +G + AY L +M +G+
Sbjct: 225 GGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 283
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV +Y IL+ G C++ V +A+++ E+M +G ++YT L+ +L +K +++E K
Sbjct: 284 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 343
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L +G PD+V YN ++ G A +++ +M P+ V+Y TL+ GLC
Sbjct: 344 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 403
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D A+K + M +G P + LI G+ G V +A + E++ G P
Sbjct: 404 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 463
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C + + ++ E+V+ I D
Sbjct: 464 TYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 6/264 (2%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF LF + + T ++NIM+R C G + A L +M P+ +Y ++
Sbjct: 97 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 152
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG- 301
G C + +V A+D++ +M +G + P+ +Y T+++ C+ ++ EA K+ M KG
Sbjct: 153 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 212
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YN ++ G+C +G+ A + M G + +Y LV L G A
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 272
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M KG +P + LI G C G V +A + E + + G T+ ++ +
Sbjct: 273 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 332
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
++++ ++ +E V+ I+ D
Sbjct: 333 SKKGQVQETDKLFDEAVRRGIRPD 356
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 169/350 (48%), Gaps = 4/350 (1%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
+ H+ TY L+L+L R + + + F L++ SN ++A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
K M E C P N ++ +++ + AF K+ LP +Y ++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ-AFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C A L ++M ++G P++ +Y ++++GLC + +++ A +LE+M +G+ P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++Y + + LC+ ++ EA K L RM V PD+V Y TV+ G C+ G A ++L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRML 237
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ M + GC P++V+Y +L+ G C G + A + M+ G P+ ++L+ +
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G + +A +L E+ + G P ++ + +C E ++K V + +V+
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 347
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 139/270 (51%), Gaps = 5/270 (1%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L+L HR+ A +F+ P+ ++ I++R C + + A L +M E
Sbjct: 14 LLQLTREHRH--DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEM 71
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G +PD Y L+ G + +A L +M+ +P ++YT +++ LC+ ++ R+A
Sbjct: 72 GCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDA 131
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
KLL M+ KGC+P+I YN +V G C E + +A K+LE+M G P++V+Y + + G
Sbjct: 132 VKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKG 191
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC D A+K++ M +P +I G C G +D A +L+ + G P
Sbjct: 192 LCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPD 248
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
T+ ++ C G E+E+ +L+ ++K+
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSMLKL 278
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 26/316 (8%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AF 186
+P+++TY + E +R L + MLE + +VT+ ++++
Sbjct: 144 SPNIYTY--NVIVEGLCEERKLDEAKKMLE------EMAVRGYFPDVVTYNSFIKGLCKC 195
Query: 187 DLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
D A K V P+ SY ++ C +GD+ A + + M RG PDV +Y L
Sbjct: 196 DRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL 255
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ +V RA+ LL+ ML G P+ ++Y +LL +L R + +A +L M+ +G
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV----------GGLC 352
PD+V YN + G C+ R A V + M GC PN SY L+ GLC
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375
Query: 353 DQGMFDVA-KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
G FD A + +++ K P + ++ C ++D+A + +++L+ +
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN-CCNV 434
Query: 412 DTWVMIVPQICAGEEM 427
TW ++V +C + +
Sbjct: 435 VTWNILVHGLCVDDRL 450
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 15/308 (4%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PVTP + +Y +I +S D A + M C P + +++ R
Sbjct: 209 PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVER- 267
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L S K G PN +YN ++ A G I A + +M RG PDV SY +
Sbjct: 268 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 327
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVP----------DTLSYTTLLNSLCRKKKLREAYKLL 294
GLC+ +V +A + + M+ +G P D L YT LL+ LC+ + EA L
Sbjct: 328 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALF 387
Query: 295 CR-MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ + K C PD+ YN ++ C+ + A ++ + M C N+V++ LV GLC
Sbjct: 388 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCV 446
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A+ + M+ +GF P F L+ C GK A + EE +K G P T
Sbjct: 447 DDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVT 506
Query: 414 WVMIVPQI 421
+ ++ +
Sbjct: 507 YSALITGL 514
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 141/299 (47%), Gaps = 17/299 (5%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR-NYLRPA 185
TP + TY LI + + +RA+ SML+ C+P N +L L HR ++ A
Sbjct: 246 TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL--HRLGHIGKA 303
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR----- 240
D+ + G P+ SYN + C + A +F++M ERG P+ SY
Sbjct: 304 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVD 363
Query: 241 -----ILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLL 294
+L+ GLC+ + + A L +L++ PD Y +L+S C+++++ +A ++
Sbjct: 364 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 423
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+M K C ++V +N +V G C + R DA +L M G +P+ V+Y TLV +C
Sbjct: 424 KQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 482
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A + + + G P ALI G + +EA + +L++ P + T
Sbjct: 483 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 19/250 (7%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+PN NS L+ L R + +D+L+ ++ + TP + +Y I ++
Sbjct: 281 RPNMVAYNS----LLGALHRLGHIGKAEDMLVEMERRGF--TPDVVSYNACIDGLCKAER 334
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR---------PAFDLFKSAHKHG 196
+A F M+E C P + ++ ++ + L A LF
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394
Query: 197 VL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ P+ YN+M+ + C I A + +M E+ +V ++ IL+ GLC +++ A
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDA 453
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L M+++GF+PD ++Y TL++++C+ K A +L GC PD+V Y+ ++ G
Sbjct: 454 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513
Query: 316 FCREGRAIDA 325
E A +A
Sbjct: 514 LVHENMAEEA 523
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTH--RNYLRPAFDL 188
L+T L+ + D A F +L E C+P N +L+ +H R + A +
Sbjct: 366 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD---SHCKRRQIDKALQI 422
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
K + N ++NI++ C + +S A T+ M + G +PD +Y L+ +C+
Sbjct: 423 HKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 481
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD--- 305
+ A++L E+ + G VPD ++Y+ L+ L + EAY L ++ + PD
Sbjct: 482 CGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541
Query: 306 --IVHYNTVVLGFCREGRAID 324
++H +L R+ +D
Sbjct: 542 LGLLHRKLKLLNKPRKAEVVD 562
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 1/307 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F L+ Y + A+ F F +P N +L L+ N + + +F
Sbjct: 147 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKG-NKVELFWKVFDG 205
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
H VLP+ +Y M+ A C G++ A + +M E+G P++ +Y +++ GLCR
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARL 265
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A++L M++KG VPD +Y L+N C +K+ REA +L M G P+ + YN
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ GF R+G A ++ ++M + G NL+ + TL+ G+C G + A + MQ M+ KG
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI+G C + A +L+E+ K AP T+ +I+ +C ++
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445
Query: 432 EVLNEIV 438
+L E+V
Sbjct: 446 AILREMV 452
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 154/333 (46%), Gaps = 36/333 (10%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
++T LI+ + + A FR +L Q +L ++ + AF +F
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFS 624
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ G+LPN +YN ++ C G++ A L +M +G+ PD+ +Y IL+ GLC+
Sbjct: 625 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD----- 305
++ RA +L +D+ +G P+ ++Y +++ C+ K A++LL M ++G PD
Sbjct: 685 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744
Query: 306 -----------------------------IVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
V +NT++ G+C+ G+ +A +LE+M
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+PN V+Y +L+ C GM AK+ M + P +L+ G+ N+G + E
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 864
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQIC-AGEEME 428
+ EE++ G P + T+ +++ C G ME
Sbjct: 865 ALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 157/330 (47%), Gaps = 9/330 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYP--VTPSLFTY--LIKIYAESNLPDRALKT 152
TY ++I L RA+ L+D+ I LK + P L+TY LI + A
Sbjct: 252 TYNVIIGGLCRAR---LLDEA-IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M++ KP P N +++ + + + AF + G+ N +N ++ C
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGD-IEQAFRIKDEMVACGIEANLIIWNTLLNGVC 366
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A + +M E+GV PD ++Y +L++G CR + RA +LL++M + P L
Sbjct: 367 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 426
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y+ ++N LCR L+ +L M + G P+ V Y T++ +EGR ++ +LE M
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G LP++ Y +L+ G C + A+ Y+ M+ + P+ A I G+ G++
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ A E+L G P+ + ++ C
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +F Y LI + ++ + A MLE +P ++ + + A
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG-YSKAGEMEIA 549
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F GVLPN Y ++ C G+++ A+++F + R V+ DV++Y +L+ G
Sbjct: 550 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 609
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L R +++ A + ++ KG +P+ +Y +L++ C++ + +A +LL M +KG NPD
Sbjct: 610 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL-------------- 351
IV YN ++ G C+ G A + +D+ G PN V+Y +V G
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729
Query: 352 ---------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
C + F+ A Q M+ KGF+ S + LI+G+C G
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF-NTLIEGYCKSG 788
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
K+ EA +LEE+++ P+ T+ ++ C
Sbjct: 789 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 133/260 (51%), Gaps = 3/260 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +Y + + G++ IA FN+M GV+P+V Y L++G C++ V A +
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 587
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+L++ + D +Y+ L++ L R K+ EA+ + ++ KG P+ YN+++ G C+
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+G A ++LE+M G P++V+Y L+ GLC G + AK + +G +P+
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
A++ G+C A +LEE+L G P + +I+ C E+ EK ++ E++
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767
Query: 439 KVEIKGDTRIVEAGIGLEDY 458
+ KG V +E Y
Sbjct: 768 E---KGFASTVSFNTLIEGY 784
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 160/351 (45%), Gaps = 40/351 (11%)
Query: 126 YPVTPSLFTYLIKIYAE---SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
+ V P ++TY I A N+ D A + M E C P N I+ L R L
Sbjct: 209 HKVLPDVYTYTNMISAHCKVGNVKD-AKRVLLEMGEKGCSPNLVTYNVIIGGLCRAR-LL 266
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF----------------------------- 213
A +L +S G++P+ +Y+I++ FC
Sbjct: 267 DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 326
Query: 214 ------NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
GDI A+ + ++M G+ ++ + L+ G+C+ ++ +A++++++M+ KG
Sbjct: 327 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD+ +Y+ L+ CR + + A++LL MK + P ++ Y+ ++ G CR G
Sbjct: 387 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L +M NG PN V Y TL+ +G + ++ ++ M +G P ++LI GFC
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+++EA L E+L+ P+ T+ + EME NE++
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 4/298 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++AL+ + M+E +P + + ++E +N R AF+L K + P +Y++
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR-AFELLDEMKKRKLAPTVLTYSV 430
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C G++ + +M G+ P+ Y LM ++ +V + +LE M +G
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+PD Y +L+ C+ K++ EA L M + P+ Y + G+ + G A
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIAD 550
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ +M S G LPN+ Y L+ G C +G A + ++S+ LI G
Sbjct: 551 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 610
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
GK+ EA G+ EL + G P+ T+ ++ C ++K ++L E+ IKG
Sbjct: 611 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC---IKG 665
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 142/316 (44%), Gaps = 14/316 (4%)
Query: 97 TYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY ILI L +A + +L DDI E +TP+ TY ++ Y +S P A
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDI------EGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ ML P N IL + A DLF+ + G +T S+N ++
Sbjct: 726 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKF-EKALDLFQEMLEKG-FASTVSFNTLIEG 783
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+C +G + A L +M E+ +P+ +Y L+ C+ + A L +M + +P
Sbjct: 784 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 843
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT+LL+ + E L M KG PD + Y ++ +CREG ++ACK+ +
Sbjct: 844 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 903
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
++ G ++ +Y L+ LC + F K + + GF + +GF G
Sbjct: 904 EILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAG 963
Query: 391 KVDEACGVLEELLKAG 406
+DEA VL ++K G
Sbjct: 964 NMDEAAEVLRSMVKFG 979
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 129/251 (51%), Gaps = 4/251 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLF--NKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
PN+ ++++M ++ G + A +F K FE P + S L+ L + ++V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE--FRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ + M +PD +YT ++++ C+ +++A ++L M KGC+P++V YN ++ G
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
CR +A ++ M G +P+L +Y L+ G C + AK + MI G P
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ALI GF G +++A + +E++ G + W ++ +C +MEK E++ E
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380
Query: 437 IVKVEIKGDTR 447
+++ ++ D++
Sbjct: 381 MMEKGVEPDSQ 391
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G+ PN Y +M A G + + + +M E+G++PDV Y L+ G C+ ++
Sbjct: 454 NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEE 513
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A L +ML + P+ +Y ++ + ++ A + M G P++ Y ++
Sbjct: 514 ARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 573
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+EG +A V + S L ++ +Y L+ GL G A + KG P
Sbjct: 574 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 633
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ ++LI G C G VD+A +LEE+ G P T+ +++ +C E+E+ +
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 693
Query: 435 NEI 437
++I
Sbjct: 694 DDI 696
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 195/455 (42%), Gaps = 40/455 (8%)
Query: 27 PSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPC-RVQKLIASQSDPLLAKEIFDYA 85
P + C S++ + + Q + K GS R+ + Q+DP A + + A
Sbjct: 20 PQVTACPSNAGLPAAARGPWWQRRARFQLKFAAGSEQERLVTALREQADPEAALRMLNSA 79
Query: 86 -SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+R S Y +I KLG A F L+ ++ ++ E + V L I YA
Sbjct: 80 LARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQ 139
Query: 145 LPDRALKTFRSMLE-FNCKPLPKQLNRILELL-------------------------VTH 178
L D A + L+ F + + N +L +L VT
Sbjct: 140 LFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTF 199
Query: 179 RNYL---------RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ R A + + V P+ ++ +M F G I A L +M E
Sbjct: 200 NTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSE 259
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G P + +L+ G C+ +V A+ ++ + GF PD ++++T +N LC+ +
Sbjct: 260 MGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDH 319
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A K+L M +GC PD+ Y+TV+ C G +A ++ M +GCLP+ ++ TL+
Sbjct: 320 ALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIV 379
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC + + A + + KG SP+ + LI C VG A + EE+ +G P
Sbjct: 380 ALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTP 439
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
E T+ +++ +C+ ++ K ++L E+ E+ G
Sbjct: 440 DEVTYNILIDNLCSSGKLAKALDLLKEM---EVSG 471
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 3/313 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY +I + + A M++ C P N ++ L T N L A D
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE-NQLEEALD 392
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ PN ++NI++ A C GD +A LF +M G PD +Y IL+ LC
Sbjct: 393 LARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLC 452
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +A+DLL++M G T++Y T+++ LC+++++ EA ++ +M V G + +
Sbjct: 453 SSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAI 512
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C R DA ++++ M S G PN V+Y +++ C QG A +Q M
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ GF LI G C + A +L + G P + ++ + G
Sbjct: 573 TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632
Query: 428 EKLGEVLNEIVKV 440
+ E+ +V
Sbjct: 633 RDALSLFREMTEV 645
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 169/372 (45%), Gaps = 34/372 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ +I L RA+ +L + S + FT L++ + E + AL+ M
Sbjct: 198 TFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257
Query: 157 LEFNCKPLPKQLN----------RILELLVTHRNYLRPAFD------------LFKSAH- 193
E C P +N R+ + L + + F+ L ++ H
Sbjct: 258 SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV 317
Query: 194 -----------KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ G P+ +Y+ ++ C NG++ A + N+M + G +PD ++ L
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LC ++Q+ A+DL ++ KG P+ ++ L+N+LC+ A +L MK GC
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V YN ++ C G+ A +L++M +GC + V+Y T++ GLC + + A++
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G + + LI G CN ++D+A ++++++ G P+ T+ I+ C
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557
Query: 423 AGEEMEKLGEVL 434
+ K ++L
Sbjct: 558 KQGNISKAADIL 569
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 4/268 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP TY LI S +AL + M C N I++ L R + A
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR-IEEAE 496
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F G+ N ++N ++ C I A L ++M G+ P+ +Y ++
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++A D+L+ M GF D ++Y TL+N LC+ ++ + A KLL M++KG P
Sbjct: 557 CKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTP 616
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ R DA + +M G P+ +Y+ + GLC G A ++
Sbjct: 617 KAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLV 676
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M GF P FS L +G N+G D
Sbjct: 677 EMADNGFIPEFSSFRMLAEGLLNLGMDD 704
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 140/333 (42%), Gaps = 5/333 (1%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
DP LA +F+ + TY ILI L + + D+L ++ P +
Sbjct: 420 GDPHLAVRLFE-EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVT 478
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ +I + + A + F M N +++ L + A +L
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER-IDDAAELVDQM 537
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ PN +YN ++ +C G+IS A + M G DV +Y L+ GLC+ +
Sbjct: 538 ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ LL M KG P +Y ++ SL R R+A L M G PD Y V
Sbjct: 598 QAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIV 657
Query: 313 VLGFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
G CR G I +A L +M NG +P S+R L GL + GM D + ++L++ K
Sbjct: 658 FRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKA 717
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+S I+G+ + K +A LL+
Sbjct: 718 NFRESDISA--IRGYLRIRKYYDAIATFGRLLE 748
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 140/260 (53%), Gaps = 5/260 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LR A D+F+ + P +YN ++ +C GD+ A L KM + PDV +Y
Sbjct: 271 LRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM C+ +++ A +L + M+ PD +++T+L++ LC + ++ +A +LL + +G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P I YN VV G+C+ + A +++ D S G +PN V+Y LV G C G D A
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447
Query: 362 KYMQLMISKGFSPHFSVS-HALI-KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+Y+ + S+G SV+ +A+I C G+ D+A EE+++ G P T+ +V
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+C + ++ E+L E++K
Sbjct: 508 ALCKAHQPQQAHELLEEMIK 527
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 8/313 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY +I ++ A+ F E +C P N ++ + + A
Sbjct: 252 TPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGD-MDEAI 307
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L P+ +Y +M AFC G + AY LF +M + PDV ++ L+ GL
Sbjct: 308 RLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 367
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C + ++ A++LLE++ +G P +Y +++ C+ ++R+A +L+ + +G P+
Sbjct: 368 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNT 427
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNG--CLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
V YN +V G CR GR A + L+ + S G C ++ Y ++ LC G D A ++
Sbjct: 428 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 487
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI +G+ P + ++ C + +A +LEE++K G P T +V C
Sbjct: 488 EEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRA 547
Query: 425 EEMEKLGEVLNEI 437
++K E+ +E+
Sbjct: 548 GMIQKADELASEL 560
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 156/321 (48%), Gaps = 12/321 (3%)
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
+E V + + LI ++ L D A+ M P N ++ L L
Sbjct: 73 AELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC-RAGRL 131
Query: 183 RPAFDLFK---SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
R A +++ AH P+ +Y ++ G + A + +M +PD +
Sbjct: 132 RHALGVYRQMNDAHP----PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTL 187
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC-RMK 298
+++Q LC +V+ A +L+E+ML++G + ++Y+ L++ LC+ ++L EA LL +
Sbjct: 188 TVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVT 247
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+G PDIV Y+TV+ G C+ GR DA + E+M C P ++Y +L+GG C G D
Sbjct: 248 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMD 304
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M+ +P L+ FC +G++D+A + ++++ +P T+ +V
Sbjct: 305 EAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 364
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+C ME E+L EI +
Sbjct: 365 DGLCGEGRMEDALELLEEITR 385
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 180/399 (45%), Gaps = 41/399 (10%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
D A +FD + H+ TY LI L +A+ +L+ +KS L
Sbjct: 61 DTTTAMALFDKMAELGAVNHT--TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLH 118
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLRPAFDLFKS 191
+I + AL +R M + + P +L+ ++ LR A + +
Sbjct: 119 NVVIGGLCRAGRLRHALGVYRQMNDAH----PPDFLTYTKLVHGLSKAGRLRDAVQVLQE 174
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+P+ + +++++ C + A L +M RG+ + +Y L+ GLC+ +
Sbjct: 175 MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 234
Query: 252 VNRAVDLL-EDMLNKGFVPDTLSYTTLLNSLCRKKKLR---------------------- 288
++ AV LL ++ +GF PD ++Y+T+++ LC+ +LR
Sbjct: 235 LDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLI 294
Query: 289 ----------EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
EA +LL +M C PD++ Y T++ FC+ GR DA ++ + M +N
Sbjct: 295 GGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS 354
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V++ +LV GLC +G + A + ++ + +G P + ++ G+C +V +A +
Sbjct: 355 PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEEL 414
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + G P+ T+ ++V C ++ + L+++
Sbjct: 415 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 453
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 143/310 (46%), Gaps = 10/310 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I L +A DI E P+ TY LI Y + D A++
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIF-----EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLG 311
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ NC P ++ L A++LF+ + + P+ ++ ++ C
Sbjct: 312 KMVDDNCAPDVITYTTLMSAFC-KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A L ++ RG P + +Y ++ G C+ +QV +A +L+ D ++GFVP+T++Y
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
L+ CR + +A + L ++ +G C + Y ++ CR+GR DA + E+M
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G +P ++ T+V LC A + ++ MI G +P A++ +C G +
Sbjct: 491 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 550
Query: 393 DEACGVLEEL 402
+A + EL
Sbjct: 551 QKADELASEL 560
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 8/315 (2%)
Query: 126 YPVTPSLFTYLIK-IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
YP S F +++ ++A + L + + P P +LN IL L R+
Sbjct: 6 YPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARD-TTT 64
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G + +T YN ++ C + A L M RG+ P + +++
Sbjct: 65 AMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLCR ++ A+ + M N PD L+YT L++ L + +LR+A ++L M P
Sbjct: 124 GLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D VV C R DA +++E+M G N ++Y LV GLC D A +
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242
Query: 365 QLMIS-KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ +GF+P +I G C G++ +A + EE+ AP T+ ++ C
Sbjct: 243 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCR 299
Query: 424 GEEMEKLGEVLNEIV 438
+M++ +L ++V
Sbjct: 300 AGDMDEAIRLLGKMV 314
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 8/284 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L G+ P T +N+++ C G + A ++ +M + PD +Y
Sbjct: 96 LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTK 154
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL + ++ AV +L++M++ VPD + T ++ SLC ++ +A +L+ M +G
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVL-EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+ + Y+ +V G C+ R +A +L ++ G P++V+Y T++ GLC G A
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M +P ++LI G+C G +DEA +L +++ AP T+ ++
Sbjct: 275 VDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTR 464
C ++ E+ ++V ++ D V L D L G+ R
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPD---VVTFTSLVDGLCGEGR 372
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 38/204 (18%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ + AL+ + C P N +++ N +R A +L
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC-KSNQVRKAEELVADF 418
Query: 193 HKHGVLPNTKSYNIM-------------------------------------MRAFCFNG 215
G +PNT +YNI+ + A C +G
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
A + +M +RG +P ++ ++ LC+ Q +A +LLE+M+ G P +
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538
Query: 276 TLLNSLCRKKKLREAYKLLCRMKV 299
++++ CR +++A +L +++
Sbjct: 539 AVVSAYCRAGMIQKADELASELRL 562
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H++ TY ILI R L +L + Y + L+ Y S A+
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M +P N ++ L H N A L G P+ +Y +++ C
Sbjct: 788 VDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 846
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A+ L NKM + + P V Y ++ GLC+ ++ A++L ++M KG P+ +
Sbjct: 847 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 906
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NPD+ ++ ++ F +EG+ ++A K+ ++M
Sbjct: 907 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++V+Y +L+ G C D AK+ + M+SK P + LIKGFC +V
Sbjct: 967 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+E V E+ + G + T+ +++ + + + E+ E+V
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 1/294 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + N A+ M+E KP N I++ L + + AFD FK +
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERK 322
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +Y ++ C + S A L + M ++ + P+V +Y L+ + +V A
Sbjct: 323 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 382
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L E+M+ PD ++Y++L+N LC ++ EA ++ M KGC D+V YNT++ G
Sbjct: 383 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 442
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ R D K+ +M G + N V+Y TL+ G G D A+++ M G SP
Sbjct: 443 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 502
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ L+ G C+ G++++A + E++ K T+ ++ +C ++E+
Sbjct: 503 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 556
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNL 145
QPN N+ L L ++ +LID ++ P L TY + + +
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK------GCQPDLVTYGVVVNGLCKRGD 850
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A M + +P N I++ L ++ ++ A +LFK G+ PN +Y+
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTYS 909
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G S A L + M ER + PDV ++ L+ ++ ++ A L ++M+ +
Sbjct: 910 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P ++Y++L+N C +L EA ++ M K C PD+V YNT++ GFC+ R +
Sbjct: 970 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+V +M G + N V+Y L+ GL G D+A++ + M+S G P+ + L+ G
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L ++ P T+ +++ +C ++E
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K E + L+T+ +I + AL ML+ +P + +
Sbjct: 205 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 264
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ RN + A L + G P+ +YN ++ + C ++ A+ F ++ +G
Sbjct: 265 VNGFC-RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ P+V +Y L+ GLC S+ + A LL DM+ K P+ ++Y+ LL++ + K+ EA
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 383
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L M +PDIV Y++++ G C R +A ++ + M S GCL ++VSY TL+ G
Sbjct: 384 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 443
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + K + M +G + + LI+GF G VD+A ++ G +P
Sbjct: 444 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ +++ +C E+EK + ++ K E+ D
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 537
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 142/270 (52%), Gaps = 4/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI + + D A + F M+ +C P N +++ ++ +
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR-VEEG 1029
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F+ + G++ NT +YNI+++ GD +A +F +M GV P++ +Y L+ G
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + P +Y ++ +C+ K+ + + L C + +KG PD
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ GFCR+G +A + ++M +G LPN Y TL+ G + + + ++
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 1209
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M S GF+ S + L+ + G++D++
Sbjct: 1210 EMRSCGFAGDAS-TIGLVTNMLHDGRLDKS 1238
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ + + +TY I I S LP AL M++ +P L+
Sbjct: 712 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSS 770
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L G PNT ++N ++ + S A L ++M +
Sbjct: 771 LLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y +++ GLC++ + A +LL M P L Y T+++ LC+ K + +A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M+ KG P++V Y++++ C GR DA ++L DM P++ ++ L+
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K M+ + P +LI GFC ++DEA + E ++ P
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ EV E+ + + G+T
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + +++L + N L + G+ N +Y
Sbjct: 677 DDAVALFGEMVK--SRPFPSIIEFSKLLSA-IAKMNKFDVVISLGEQMQNLGIPHNHYTY 733
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ FC + +A + KM + G P++ + L+ G C +++ AV L++ M
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ P+T+++ TL++ L K EA L+ RM KGC PD+V Y VV G C+ G
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P ++ Y T++ GLC D A + M +KG P+ +LI
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
CN G+ +A +L ++++ P T+ ++ ++ + ++ +E+VK I
Sbjct: 914 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 129/257 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF K P+ +N ++ A + +L KM G+ D+ ++ I
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C QV+ A+ +L ML G+ PD ++ +L+N CR+ ++ +A L+ +M G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YN ++ C+ R DA +++ G PN+V+Y LV GLC+ + A
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI K +P+ AL+ F GKV EA + EE+++ P T+ ++ +
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408
Query: 422 CAGEEMEKLGEVLNEIV 438
C + +++ ++ + +V
Sbjct: 409 CLHDRIDEANQMFDLMV 425
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 132/264 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF K P+ ++ ++ A + +L +M G+ + +Y I
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ P+ ++ ++LLN C K++ EA L+ +M V G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+LV+Y +V GLC +G D+A
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M P + + +I G C +D+A + +E+ G P+ T+ ++ +
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
C +L+++++ +I D
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPD 939
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 11/249 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY LI + D A + F M+ C N ++ + +
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR-VEDG 452
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ + G++ NT +YN +++ F GD+ A F++M G+ PD+ +Y IL+ G
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+ + EDM + D ++YTT++ +C+ K+ EA+ L C + +KG PD
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV Y T++ G C +G + + M G + N + G ++ + ++
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELIK 624
Query: 366 LMISKGFSP 374
M+S G++P
Sbjct: 625 KMLSCGYAP 633
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 3/285 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + P++ TY L+ S+ A + M++ P + +L+ V +
Sbjct: 320 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 379
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF+ + + P+ +Y+ ++ C + I A +F+ M +G + DV SY
Sbjct: 380 LE-AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 438
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V + L +M +G V +T++Y TL+ + + +A + +M G
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PDI YN ++ G C G A + EDM ++V+Y T++ G+C G + A
Sbjct: 499 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 558
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ KG P ++ G C G + E + ++ + G
Sbjct: 559 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M + P + + L+ + + + + + L + M G D ++ ++N
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ A +L +M G PD V ++V GFCR R DA +++ M G P
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y ++ LC + A + + + KG P+ AL+ G CN + +A +L
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++K P+ T+ ++ ++ + E+ E+V++ I D
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++N A+DL DM+ P + + LL+++ + KK L +M+V G D+
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N V+ FC + A +L M G P+ V+ +LV G C + A + M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G+ P +A+I C +V++A +E+ + G P+ T+ +V +C
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 428 EKLGEVLNEIVKVEI 442
+L++++K +I
Sbjct: 345 SDAARLLSDMIKKKI 359
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 149/380 (39%), Gaps = 79/380 (20%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL-LVTHRN 180
+ + ++P ++TY L+ ++ ++AL F M + R ++L +VT+
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK-----------REMDLDIVTYTT 543
Query: 181 YLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCF------------------ 213
+R A+ LF S G+ P+ +Y MM C
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Query: 214 ---------NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS-------------- 250
+GDI+++ L KM G P + + + G+C+K+
Sbjct: 604 LMKNDCTLSDGDITLSAELIKKMLSCGYAPSL--LKDIKSGVCKKALSLLRAFSGKTSYD 661
Query: 251 -------------QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+++ AV L +M+ P + ++ LL+++ + K L +M
Sbjct: 662 YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 721
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ G + Y+ ++ FCR + A VL M G PN+V+ +L+ G C
Sbjct: 722 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 781
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + M G+ P+ + LI G K EA +++ ++ G P T+ ++
Sbjct: 782 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 841
Query: 418 VPQICAGEEMEKLGEVLNEI 437
V +C + + +LN++
Sbjct: 842 VNGLCKRGDTDLAFNLLNKM 861
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 180/382 (47%), Gaps = 34/382 (8%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
DP A F++ +R+P FRH+ +++ L+ L R + + D ++++
Sbjct: 69 DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVS------------- 115
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPL---PKQLNRILELLVTHRNYLRPAFD--- 187
+I + A+ +++ K L PK N L R+ LR FD
Sbjct: 116 --MISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLAL------RSLLR--FDMTE 165
Query: 188 ----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
L+ + G+LP+T +YN M+ A+C G ++IA+ F + E G+ D + L+
Sbjct: 166 HMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALL 225
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G CR + +A LL M G + SYT L+ LC + +REA LL M GC+
Sbjct: 226 LGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCS 285
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ Y ++ G C+EGR DA +L++MP G +P++ +Y ++ G C G A
Sbjct: 286 PNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI 345
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
LM G +P ++LI G C GK DEA +L + G +P T+ I+ C
Sbjct: 346 KTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCK 404
Query: 424 GEEMEKLGEVLNEIVKVEIKGD 445
E+++ V + ++ + K D
Sbjct: 405 AEKIDDALRVKSIMISSKCKLD 426
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 176/410 (42%), Gaps = 32/410 (7%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
S I + C+V K+ A A E+F + R + TY LI L + + L
Sbjct: 467 SIIDAYCKVGKVGA-------ALEVFKLTEHE-GCRPNAWTYSSLIYGLIQDQ--KLHKA 516
Query: 117 ILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+ + K + +TP + TY LI+ + + D A + F M + P + N + +
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L A + + K GV+ +Y ++ F G+ A L KM G
Sbjct: 577 LCKSGR----AEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKA 632
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D +Y +L+Q LC++ ++N A+ +L+ M +G + ++YT +++ + ++ K A +
Sbjct: 633 DSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMF 692
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M G P + Y + +C+ GR +A ++ +M NG P++V+Y + G
Sbjct: 693 NEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHM 752
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIK----------------GFCNVGKVDEACGV 398
G D A ++ MI P++ L+K G N K+D +
Sbjct: 753 GYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQL 812
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
LE ++K G P T+ I+ C +E+ +L+ ++ +I + I
Sbjct: 813 LERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEI 862
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ S HK P+ +Y + + ++C G I A L +M GV PDV +Y + + G
Sbjct: 694 EMISSGHK----PSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGC 749
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK----------------KLREA 290
++ A L+ M++ P+ +Y LL + KL
Sbjct: 750 GHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTV 809
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++LL RM G NP V Y++++ GFC+ R +AC +L+ M PN Y L+
Sbjct: 810 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 869
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
CD +F+ A ++ MI GF PH H LI G C+ G D+A + +LL+ +
Sbjct: 870 CCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHN 929
Query: 411 EDTWVMI 417
E W ++
Sbjct: 930 EVAWKIL 936
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 148/323 (45%), Gaps = 9/323 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFN-CKPLPKQLNRILELLVTHRNYLRP 184
V PS++TY +I Y +S AL ++++E N C P N ++ L +
Sbjct: 319 VVPSVWTYNAMIDGYCKSGRLKDALG-IKTLMEGNGCNPDDWTYNSLIHGLCGGKP--DE 375
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L A G P ++ ++ +C I A + + M D+++Y +L+
Sbjct: 376 AEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLIS 435
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L +K ++ A D L ++ G P+ + YT+++++ C+ K+ A ++ + +GC P
Sbjct: 436 VLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRP 495
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ Y++++ G ++ + A ++ M +G P +++Y TL+ G C + FD A +
Sbjct: 496 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 555
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
++M G +P + L C G+ +EA L+K G + T+ +V
Sbjct: 556 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKA 612
Query: 425 EEMEKLGEVLNEIVKVEIKGDTR 447
E ++ ++V K D+
Sbjct: 613 GNTEFAAALIEKMVNEGCKADSH 635
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +SY+ ++ C GD A LF + E + +++IL GL + V+
Sbjct: 890 GFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDIC 949
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
LL M N+ D+ +Y+ + N++ + E+Y
Sbjct: 950 SQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY 985
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 8/336 (2%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E F +A RQ +RH+ + +++ L R + ++ + P F +L+
Sbjct: 111 EFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLS 170
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
Y+ + A++ + M + C P N + +LV + A + + + GV P
Sbjct: 171 YSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVA-GRIDKALEFAERMRRVGVDP 229
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+ +YN +++ C I A + + M + G +PD SY +M LC++ +V +LL
Sbjct: 230 DVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLL 289
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E M + G PD ++Y L++ L + EA L + K D V Y+ V FC
Sbjct: 290 ERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLN 349
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
GR +A +++ +M S GC P++V+Y +V G C G D A+K M+ M G P+
Sbjct: 350 GRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTH 409
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
AL+ G C VGK EA ELL E E+ W
Sbjct: 410 TALLNGLCKVGKSSEAW----ELLNKSE---EEWWT 438
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 153/313 (48%), Gaps = 5/313 (1%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY--LR 183
Y P +F ++ + + + L D A + R M+ + +P+ + L++++ LR
Sbjct: 122 YRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIR---RGMPRGTRQFAHLMLSYSRAGKLR 178
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + + K G P+ N+ + G I A +M GV PDV +Y L+
Sbjct: 179 SAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLI 238
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC ++ A++++ ML G +PD +SY T+++ LC++K++ + LL RM G
Sbjct: 239 KGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIF 298
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD V YN ++ G + G A +A L + + V Y V C G AK+
Sbjct: 299 PDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEI 358
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ MISKG P A++ GFC +G++D+A +++ + K G P+ T ++ +C
Sbjct: 359 IGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCK 418
Query: 424 GEEMEKLGEVLNE 436
+ + E+LN+
Sbjct: 419 VGKSSEAWELLNK 431
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 3/314 (0%)
Query: 97 TYLILILKL-GRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY LI L G + ++ I L++ P S FT + + E + D
Sbjct: 233 TYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVAD-VQNLLER 291
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M + P N ++ L H + A + + + Y+ + +FC NG
Sbjct: 292 MSDAGIFPDQVTYNMLIHGLAKH-GHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNG 350
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A + +M +G PDV +Y ++ G CR ++++A +++ M G P+T+++T
Sbjct: 351 RMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHT 410
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
LLN LC+ K EA++LL + + + P + Y+ V+ GF REG+ ++C V+ M
Sbjct: 411 ALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQK 470
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P V L+ LC++ AK +M+ SKG + +I GF G ++ A
Sbjct: 471 GFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESA 530
Query: 396 CGVLEELLKAGEAP 409
+L+++ P
Sbjct: 531 LSLLDDMYLTNRHP 544
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 138/266 (51%), Gaps = 2/266 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + K +K+G PNT ++ ++ C G S A+ L NK E P +Y +
Sbjct: 387 LDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSV 446
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M G R+ ++ + D++ ML KGF P T+ L+++LC ++K +A + + + KG
Sbjct: 447 VMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKG 506
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C ++V++ TV+ GF R+G A +L+DM P++V+Y +V L +G A
Sbjct: 507 CFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEAT 566
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M+++G P +I +C G V++ +L+++L + + ++ ++
Sbjct: 567 SLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKML--AKEGFSSAYNQVIEKL 624
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTR 447
CA ++ + +L+++++ K D +
Sbjct: 625 CAFGKLSEANNLLSKVLRTASKRDAQ 650
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 89/261 (34%), Gaps = 83/261 (31%)
Query: 122 KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
KSE TPS TY + ++ E L + + ML+ P ++N ++ L
Sbjct: 431 KSEEEWWTPSAITYSVVMHGFRREGKLKE-SCDVVMQMLQKGFFPTTVEINLLIHALCNE 489
Query: 179 RNYLRPA--FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN----------- 225
R +PA D + G N ++ ++ F GD+ A +L +
Sbjct: 490 R---KPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDV 546
Query: 226 ------------------------KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
KM RG+ P +YR ++ C K V ++LL+
Sbjct: 547 VTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDK 606
Query: 262 MLNK-GFVPDTLSYTTLLNSLCRKKKLREA------------------------------ 290
ML K GF + +Y ++ LC KL EA
Sbjct: 607 MLAKEGF---SSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRG 663
Query: 291 -----YKLLCRMKVKGCNPDI 306
Y + CRM + PD+
Sbjct: 664 LPLQSYNVACRMFQRNLIPDL 684
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 5/330 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFC 212
M E C P N +L+ L N + A +L G P+ SYN ++ F
Sbjct: 154 MTELGCIPDVFSYNNLLKGLC-DENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +RG++PDV +Y ++ LC+ +++A+++L M+ G +PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C + +EA L +M+ G P++V Y++++ C+ GR+ +A K+ + M
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +YRTL+ G +G + LM+ G P V + LI + KV
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
D+A V ++ + G P+ + ++ +C
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 163/333 (48%), Gaps = 5/333 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY +I ++ D+A++ +M++ P N IL + + A
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEA 290
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV PN +Y+ +M C NG + A +F+ M +RG+ PD+ +YR L+QG
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD + L+ + +++K+ +A + +M+ G NP+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y TV+ C+ G DA E M G PN++ Y +L+ GLC +D A++ +
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + + +++ G P T+ ++ C
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
+M++ ++L +V V +K D IV G + Y
Sbjct: 531 KMDEATKLLASMVSVGVKPD--IVTYGTLINGY 561
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 154/293 (52%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ ++ A K F SM + +P +L+ T + L
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT-KGALVEM 360
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ +NI++ A+ + A +F+KM + G+ P+V Y ++
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A+ E M+++G P+ + YT+L++ LC K +A +L+ M +G +
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ + M G P++++Y TL+ G C G D A K +
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P LI G+C V ++D+A + +E++ +G +P+ T+ +I+
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 165/330 (50%), Gaps = 25/330 (7%)
Query: 146 PDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRP-------------------- 184
PD A T+R++L+ + K +++ +L+L+V RN ++P
Sbjct: 339 PDIA--TYRTLLQGYATKGALVEMHALLDLMV--RNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F +HG+ PN Y ++ C +G + A F +M + G+ P++ Y L+
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + ++A +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ YNT++ G C G+ +A K+L M S G P++V+Y TL+ G C D A
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G SP+ + +++G + + A + + K+G T+ +I+ +C
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ + + +++ +TR IG
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIG 664
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 13/287 (4%)
Query: 168 LNRILELLVTHRNYLRPA-----FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
LNR L + H PA ++ A V P +Y I++ C G + + +
Sbjct: 58 LNRALADVARHS----PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFA 113
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSL 281
+ ++G D ++ L++GLC + + A+D+ L M G +PD SY LL L
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 282 CRKKKLREAYKLLCRM---KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C + + +EA +LL M + G PD+V YNTV+ GF +EG + A +M G L
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGIL 233
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++ LC D A + + M+ G P ++++ G+C+ G+ EA G
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L+++ G P+ T+ ++ +C + ++ + + K ++ D
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 161/356 (45%), Gaps = 7/356 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ FR T+ L+ L K S DI++ +E P +F+Y L+K + N
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE-LGCIPDVFSYNNLLKGLCDENR 178
Query: 146 PDRALKTFRSMLEFNCKPLPKQL---NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
AL+ M + P + N +L + + A+ + G+LP+
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK-AYSTYHEMLDRGILPDVV 237
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y+ ++ A C + A + N M + GVMPD +Y ++ G C Q A+ L+ M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ G P+ ++Y++L+N LC+ + EA K+ M +G PDI Y T++ G+ +G
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
++ +L+ M NG P+ + L+ Q D A M G +P+ +
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
I C G VD+A E+++ G P+ + ++ +C ++ +K E++ E++
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 155/352 (44%), Gaps = 3/352 (0%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEF 159
IL AK + +L+ K + + P++ Y +I + +S D A+ F M++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P ++ L T + + A +L G+ NT +N ++ + C G +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDK-AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
+ LF+ M GV PD+ +Y L+ G C +++ A LL M++ G PD ++Y TL+N
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR ++ +A L M G +P+I+ YN ++ G R A ++ + +G
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
L +Y ++ GLC + D A + Q + + +I G++DEA +
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
G P T+ ++ + +E+L ++ + + D+R++ +
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYRILM 243
F + K G + ++ +++ C + S A + +M E G +PDV SY L+
Sbjct: 111 GFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL 170
Query: 244 QGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLN--------------------- 279
+GLC +++ A++LL M + G PD +SY T+LN
Sbjct: 171 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 280 --------------SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+LC+ + + +A ++L M G PD + YN+++ G+C G+ +A
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
L+ M S+G PN+V+Y +L+ LC G A+K M +G P + L++G
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ G + E +L+ +++ G P + ++ ICA + EK+ + +
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNIL---ICAYAKQEKVDQAM 396
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR-- 183
V P + TY LI + D A K SM+ KP I+ Y R
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP------DIVTYGTLINGYCRVS 565
Query: 184 ---PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A LFK GV PN +YNI+++ + A L+ + + G ++ +Y
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ GLC+ + + A+ + +++ +T ++ ++ +L + ++ EA L
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+ Y+ + +G + + M NGC + ++V L +G A
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
Query: 361 KKYMQLMISKGFSPHFSVSHALIK 384
Y+ ++ K FS S + L++
Sbjct: 746 GTYLFMIDEKHFSLEASTASFLLE 769
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 120/298 (40%), Gaps = 1/298 (0%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y LI L + +++++ + + F +I + + + K F M+
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
KP N +++ + A L S GV P+ +Y ++ +C +
Sbjct: 509 RIGVKPDIITYNTLIDGCCLA-GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A LF +M GV P++ +Y I++QGL + A +L + G + +Y +
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L+ LC+ EA ++ + + + +N ++ + GR +A + +NG
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+P++ +Y + L +QG + M G S + +++++ G + A
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 172/350 (49%), Gaps = 4/350 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+ +E+ + PN +++ T + K+GR + D ++T K E P ++ L
Sbjct: 536 IMREMRERGGIAPN-QYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKP-EAVMYNAL 592
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I Y + D AL M+E N ++ L A++L + G
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKG 651
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P+ +YNI++ C G++ A +F M RGV V +Y L+ L +K QV
Sbjct: 652 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L ++ + +G PD + Y L+NS + A++++ M+ K PD V YNT++ G
Sbjct: 712 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 771
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR +A K++++M G P+LV+Y TL+ G +G A + M++KGF+P
Sbjct: 772 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 831
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ALI+G C G+ D+A +++E+++ G P + T++ ++ + +E
Sbjct: 832 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 5/333 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRIL 172
DI+ ++ E + P+ +TY +I + + D A+K F ML + KP N ++
Sbjct: 535 DIMREMR-ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 593
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A + GV +YN+++ A +G + AY L +M +G+
Sbjct: 594 GGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV +Y IL+ G C++ V +A+++ E+M +G ++YT L+ +L +K +++E K
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L +G PD+V YN ++ G A +++ +M P+ V+Y TL+ GLC
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D A+K + M +G P + LI G+ G V +A + E++ G P
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C + + ++ E+V+ I D
Sbjct: 833 TYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 6/272 (2%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF LF + + T ++NIM+R C G + A L +M P+ +Y ++
Sbjct: 466 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 521
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG- 301
G C + +V A+D++ +M +G + P+ +Y T+++ C+ ++ EA K+ M KG
Sbjct: 522 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 581
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YN ++ G+C +G+ A + M G + +Y LV L G A
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 641
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M KG +P + LI G C G V +A + E + + G T+ ++ +
Sbjct: 642 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 701
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++++ ++ +E V+ I+ D + A I
Sbjct: 702 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 19/382 (4%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-K 122
+ LI Q+ A + F +AS P F HS STY LI KL F + +L +
Sbjct: 41 HIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPH 100
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV-----T 177
+ P +F +I+ + + +K + +F P K N IL++LV
Sbjct: 101 AIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDV 160
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R + R K GV + ++ I+M+ C I + L M RGV P+
Sbjct: 161 AREFYR------KQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAV 214
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ LC+ +V RA L++++ P+ +++ L+ + C+++ L +A LL +
Sbjct: 215 VYNTLLHALCKNGKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKS 270
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD+V VV C GR +A ++LE + G L ++V+Y TL+ G C G
Sbjct: 271 FSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKI 330
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
VA ++++ M KG P+ + LI GFC+ G D A + ++ G + + DT+ +
Sbjct: 331 KVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTL 390
Query: 418 VPQICAG---EEMEKLGEVLNE 436
+ + G EE K+ E++ E
Sbjct: 391 IKGLFFGGRIEEGLKILELMEE 412
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 167/378 (44%), Gaps = 46/378 (12%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ SL+D+I E VT F LI Y + +AL P
Sbjct: 228 KVGRAR--SLMDEI-----EEPNDVT---FNVLIAAYCKEENLVQALVLLEKSFSLGFVP 277
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++E+L + + A ++ + G L + +YN ++R FC G I +A+
Sbjct: 278 DVVTMTKVVEIL-CNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRF 336
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
+M +G +P+VE+Y IL+ G C + A+D+ DM G + +Y TL+ L
Sbjct: 337 LKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFF 396
Query: 284 KKKLREAYKLLCRMKVK--GCNPDIVHYNTV----------------------------- 312
++ E K+L M+ G I YN+V
Sbjct: 397 GGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVD 456
Query: 313 ----VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
+LGFC +G +A V + M + G PN++ Y LV G C +G A + M M+
Sbjct: 457 RSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMV 516
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G+ S +ALI GFC GK + A +L++++ G P T+ ++ +C +
Sbjct: 517 GHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQ 576
Query: 429 KLGEVLNEIVKVEIKGDT 446
K + N++++ I D+
Sbjct: 577 KALSIFNQMIEKGITPDS 594
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A K + G LPN ++YNI++ FC +G +A +FN M G+ + ++Y
Sbjct: 330 IKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDT 389
Query: 242 LMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLS-YTTLLNSLCRKKKLREAYKLLCRMKV 299
L++GL ++ + +LE M +KG +S Y ++L L +K EA + L +M+
Sbjct: 390 LIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEK 449
Query: 300 ---------------------------------KGCNPDIVHYNTVVLGFCREGRAIDAC 326
+G P+I+ Y+ +V GFC+EG +A
Sbjct: 450 LFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAF 509
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++ +M +G + L+ G C QG + A K + M+ +G P LI
Sbjct: 510 ELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDAL 569
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C G +A + ++++ G P TW
Sbjct: 570 CRKGNFQKALSIFNQMIEKGITPDSSTW 597
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 45/239 (18%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI-------------------------SI 219
A D+F G+ N +Y+ +++ F G I S+
Sbjct: 368 ALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSV 427
Query: 220 AYTLF---------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
Y L+ K+F R V S RIL G C K V A + + M+N
Sbjct: 428 LYGLYKKNMWDEALEFLMKMEKLFPRAV---DRSLRIL--GFCEKGAVKNAKMVFDQMIN 482
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G P+ L Y L++ C++ LREA++L+ M G +N ++ GFC +G+
Sbjct: 483 EGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDES 542
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A K+L+DM GC+P+ +Y L+ LC +G F A MI KG +P S ++L+
Sbjct: 543 ALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL-VTHRNYLRPAFDLFKSAHKHGVLPN 200
+ N+ D AL+ M K P+ ++R L +L + ++ A +F G PN
Sbjct: 433 KKNMWDEALEFLMKME----KLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPN 488
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
Y+ ++ FC G++ A+ L N+M G + L+ G C + + A+ LL+
Sbjct: 489 ILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLD 548
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
DM+ +G VPD +Y+ L+++LCRK ++A + +M KG PD +N++++ +E
Sbjct: 549 DMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDA 325
F +Y L+ LC + Y+LL M G PD + TV+ G R
Sbjct: 68 FTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHV 127
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSVSHALIK 384
KVL+ + G P+L + +++ L + DVA++ Y + M+ G L+K
Sbjct: 128 IKVLDLISKFGKNPSLKIFNSILDVLVKVDI-DVAREFYRKQMMGSGVQGDDYTFAILMK 186
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G C ++ + +L+ + G P+ + ++ +C ++ + +++EI
Sbjct: 187 GLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEI 239
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T +I + + L AL+ M+ C P N +L L R L A L
Sbjct: 18 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL-DAEGLLNE 76
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ +C G + A LF+ M + + PD+ +Y L+ G+CR+
Sbjct: 77 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+++A DL +DM ++ P+ ++Y+ L++S C K ++ +A+ L M KG P+I+ YN+
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G K L+ M N P+L++Y TL+ G + A K + +M +
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-MIVPQICAGEEME 428
P + LI GF G V EA + E++ G P T++ MI + AG E
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 314
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 138/251 (54%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++P+ Y +++ FC G +S A + ++M G +PDV +Y L+ GLC++ ++ A
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
LL +M +G PD ++TTL++ C + KL +A +L M + PDIV YNT++ G
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
CR+G A + +DM S PN V+Y L+ C++G + A ++ MI+KG P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+++IKG+C G V + L++++ +P T+ ++ ++M ++LN
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250
Query: 436 EIVKVEIKGDT 446
+ K +++ D
Sbjct: 251 MMEKEKVQPDV 261
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF + + P+ +YN ++ C GD+ A L++ M R + P+ +Y I
Sbjct: 102 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 161
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C K QV A L++M+NKG +P+ ++Y +++ CR + + K L +M V
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G+ +E + DA K+L M P++V+Y L+ G G A
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+ M +KG P ++I G G EA + +E+L+ G AP +
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 131/250 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G LP+ +YN ++ C + A L N+M ERGV PD+ ++ L+ G C + ++++A
Sbjct: 46 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 105
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L + MLN+ PD ++Y TL++ +CR+ L +A L M + P+ V Y+ ++
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 165
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C +G+ DA L++M + G LPN+++Y +++ G C G +K++Q M+ SP
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+ K+ +A +L + K P T+ M++ +++ G +
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 285
Query: 436 EIVKVEIKGD 445
++ I+ D
Sbjct: 286 KMCAKGIEPD 295
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%)
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +M G VPD + YT ++ CR + +A ++ M GC PD+V YNT++ G C+
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
E R +DA +L +M G P+L ++ TL+ G C +G D A + M+++ P
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI G C G +D+A + +++ P+ T+ +++ C ++E L+E++
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 439 KVEI 442
I
Sbjct: 184 NKGI 187
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 34/278 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L + + + +L ++ P FT LI Y D+AL+ F +M
Sbjct: 53 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112
Query: 157 LEFNCKPLPKQLNRIL----------------------ELLVTHRNY------------L 182
L +P N ++ E+ H Y +
Sbjct: 113 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 172
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
AF G+LPN +YN +++ +C +G++S KM V PD+ +Y L
Sbjct: 173 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G ++ +++ A LL M + PD ++Y L+N ++EA + +M KG
Sbjct: 233 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 292
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
PD Y +++ G G + +A ++ ++M G P+
Sbjct: 293 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L +M G +P+ V Y ++GG C G+ A + M+ G P + L+ G C
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ +A G+L E+ + G P T+ ++ C +++K ++ + ++ ++ D
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 181/394 (45%), Gaps = 39/394 (9%)
Query: 53 SNSKSPIGSPCRVQKLIA--SQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
++ P+ + + Q L A Q DP A + + A + +F Y +I KLG
Sbjct: 30 ASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGA 89
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
L+ ++ ++ E + V + + Y L D A+
Sbjct: 90 LDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV-------------------- 129
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L++ N L+P F G+ +T YN ++ + + +++++M R
Sbjct: 130 --DLIL---NQLQPLF---------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ PDV ++ LM+ LCR QV AV +LE+M ++G PD ++TTL+ + + A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ RM GC+ V N ++ G+C+ GR DA ++ ++G P+ ++Y T V G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC A K M +M+ +G P + ++ C G+++EA G+L +++ G P
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
T+ ++ +C G +E E L+ +V +KG
Sbjct: 356 ITTFNTLIAALCTGNRLE---EALDLARQVTVKG 386
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 143/282 (50%), Gaps = 3/282 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ ++ + A M++ C P N ++ L T N L A D
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG-NRLEEALD 377
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + GV P+ ++NI++ A C GD +A LF +M G PD +Y L+ LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +A+DLL+DM + G T++Y T+++ LC+K ++ EA ++ +M ++G + + +
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C++ + DA +++ M S G PN ++Y +++ C QG A ++ M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ GF LI G C G+ A VL + G P
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 169/372 (45%), Gaps = 34/372 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ L+ L RA +L + S + FT L++ + E + AL+ M
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 157 LEFNCKPLPKQLN----------RILELL------------------------VTHRNYL 182
LE C +N R+ + L + +++
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A + + G P+ +YNI++ C NG + A + N+M +RG +PD+ ++ L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LC +++ A+DL + KG PD ++ L+N+LC+ A +L MK GC
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V YNT++ C G+ A +L+DM S GC + ++Y T++ GLC + + A++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M +G S + + LI G C K+D+A ++ +++ G P+ T+ I+ C
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542
Query: 423 AGEEMEKLGEVL 434
+++K ++L
Sbjct: 543 KQGDIKKAADIL 554
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 10/322 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFN 160
KLGR ++D L ++ E P TY + +++ ALK M++
Sbjct: 263 KLGR------VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P N ++ L + L A + G LP+ ++N ++ A C + A
Sbjct: 317 HDPDVFTYNIVVNCLCKN-GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L ++ +GV PDV ++ IL+ LC+ + A+ L E+M N G PD ++Y TL+++
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC KL +A LL M+ GC + YNT++ G C++ R +A +V + M G N
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++ TL+ GLC D A + + MIS+G P+ ++++ +C G + +A +LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 401 ELLKAGEAPHEDTWVMIVPQIC 422
+ G T+ ++ +C
Sbjct: 556 TMTANGFEVDVVTYGTLINGLC 577
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP TY LI +AL + M C N I++ L + + A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIEEAE 481
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F G+ N ++N ++ C + I A+ L N+M G+ P+ +Y ++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + +A D+LE M GF D ++Y TL+N LC+ + + A K+L M++KG P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYMQ 365
YN V+ R DA + +M G P+ ++Y+ + GLC G A +M
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M+ KGF P FS L +G N+G D
Sbjct: 662 EMVDKGFIPEFSSFRMLAEGLLNLGMDD 689
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN N TY ++ + DIL T+ + + V + LI ++
Sbjct: 528 QPN----NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
ALK R M +P PK N +L+ L RN +R A LF+ + G P+ +Y I+
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLF-RRNNIRDALSLFREMAEVGEPPDALTYKIV 642
Query: 208 MRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGL 246
R C G I A+ +M ++G +P+ S+R+L +GL
Sbjct: 643 FRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 183/377 (48%), Gaps = 18/377 (4%)
Query: 50 SSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK 109
+++ N S G P ++L+ + + A++I QPN N L+ L + +
Sbjct: 14 NALVNGFSKQGRPGDCERLL----ETMAARDI------QPNVVSYNG----LLEGLCKLE 59
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
+ ++++ + S TP + TY L+ Y ++ + + + + ++ +P
Sbjct: 60 RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+++ L L + + G P ++N ++ C ++ +A +L KM
Sbjct: 120 YTKVVASLCKSARLGEALE-LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
GV DV +Y LM GLC+ ++ A LLE M G PD ++Y++ + LC+ K+
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRT 346
+A+++L +M+ +P++V YNT++ G C+ G+ A +++E M S+GC N+V Y T
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V GLC G A+ M+ M G P +L+ G C GK++EA + E+ G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 407 EAPHEDTWVMIVPQICA 423
P+ T+ +V +C+
Sbjct: 359 CKPNAVTYCSLVHGLCS 375
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 135/253 (53%), Gaps = 1/253 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L K G+ P+ Y ++ + C + + A L +M G P + ++ L+ G
Sbjct: 103 ELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR+ + A LL+ M G D ++Y TL++ LC+ +L+EA +LL RMK GC PD+
Sbjct: 163 CREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDV 222
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y++ V G C+ G+ +DA +VLE M + PN+V+Y T++ GLC G D A + M+
Sbjct: 223 VAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQ 282
Query: 367 MISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S G + ++ G C +G+ EA V+E + +AG P T+ +V +C
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 426 EMEKLGEVLNEIV 438
++E+ E + E+
Sbjct: 343 KIEEAVEAVREMA 355
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 139/272 (51%), Gaps = 2/272 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T ++ +S AL+ M+ C P N ++ +N L A L +
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN-LEMADSLLQK 177
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV + +YN +M C G + A L +M G PDV +Y + GLC+ +
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYN 310
V A +LE M + P+ ++Y T+L+ LC+ K+ A +++ +M GC ++V Y+
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
TVV G C+ GR +A V+E M GC P++V+Y +LV GLC G + A + ++ M +
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G P+ +L+ G C+ G++ EA ++EE+
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 3/278 (1%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P F L+ +++ P + +M + +P N +LE L + A
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERW-HEAE 65
Query: 187 DLFKSAHKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+L + G P+ +Y+ ++ +C G + + L ++ RG+ PD Y ++
Sbjct: 66 ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ +++ A++LLE+M+ G P +++ TL++ CR+K L A LL +M G
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V YNT++ G C+ GR +A ++LE M ++GC P++V+Y + V GLC G A + +
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ M P+ + ++ G C GK+D A ++E++
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 128/244 (52%), Gaps = 8/244 (3%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G PN+ ++N ++ F G L M R + P+V SY L++GLC+ + +
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62
Query: 254 RAVDLLEDMLNKG--FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A +L+ DM+++G PD ++Y+TLL+ C+ K+ E+ +LL + +G PD + Y
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
VV C+ R +A ++LE+M GC P L+++ TL+ G C + ++A +Q M + G
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ L+ G C G++ EA +LE + +G AP + V +C K G
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC------KSG 236
Query: 432 EVLN 435
+VL+
Sbjct: 237 KVLD 240
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRILMQG 245
L ++ + PN SYN ++ C A L M RG PD+ +Y L+ G
Sbjct: 32 LLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSG 91
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +V + +LL++++++G PD L YT ++ SLC+ +L EA +LL M GC P
Sbjct: 92 YCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPT 151
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ +NT++ G CRE A +L+ M ++G ++V+Y TL+ GLC G A++ ++
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M + G +P + + G C GKV +A VLE++ + P+ T+ I+ +C
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSG 271
Query: 426 EMEKLGEVLNEIV 438
+++ E++ ++
Sbjct: 272 KIDTALEMMEQMA 284
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 11/314 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LI R K + D +L + + + L+ ++ A + M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYL--RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
C P + + L L + + +H PN +YN ++ C +
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD---PNVVTYNTILDGLCKS 270
Query: 215 GDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G I A + +M G +V Y ++ GLC+ + A ++E M G PD ++
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y++L+N LC+ K+ EA + + M ++GC P+ V Y ++V G C GR +A +++E+M
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMS 390
Query: 334 SNG-----CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
S G C P++ +Y L+GGLC G D A K+ Q M S+G P +++G
Sbjct: 391 SGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450
Query: 389 VGKVDEACGVLEEL 402
G+ +A +L E+
Sbjct: 451 SGRALQAEMILSEV 464
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G P+++++ L+N ++ + + +LL M + P++V YN ++ G C+ R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 322 AIDACKVLEDMPSNG--CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+A +++ DM S G P++V+Y TL+ G C G + +++ ++ +IS+G P +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ C ++ EA +LEE+++AG P T+ ++ C + +E +L ++
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 440 VEIKGD 445
+K D
Sbjct: 181 SGVKAD 186
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 174/373 (46%), Gaps = 8/373 (2%)
Query: 30 IFCYSSS--SQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASR 87
IF +S S S+ + S+P ++ +KS +P ++ + + D + +
Sbjct: 13 IFNHSRSPTSRFNKSNPSLPSSATQKCNKSTAATPLTAEEHLQNIVDKFIKN------TE 66
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
FRH T+ + L K FSLI+DI+ K T LIK+Y ++ +
Sbjct: 67 SQRFRHKKGTFDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFS 126
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A K F + E NC+ K N +L V + + + + + + + SYNI+
Sbjct: 127 HARKLFDELPELNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIV 186
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AFC + A F+ M + G+ P++ ++ L+ L RK Q + M NK
Sbjct: 187 INAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNI 246
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +SY L + +K++++ +LL +M+ K PD+ YN ++ GFC++G +A K
Sbjct: 247 APDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKK 306
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ + P +YR L+ LC+QG FD + + I KGF H + ++ G
Sbjct: 307 WYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVNGLA 366
Query: 388 NVGKVDEACGVLE 400
V K++EA ++E
Sbjct: 367 EVSKIEEAKDLVE 379
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 169/335 (50%), Gaps = 7/335 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P FT+ LI + + D ALK ++ +L +C+ + ++ L R + A
Sbjct: 112 VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERR-IGEA 170
Query: 186 FDLFKSAH--KHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
++LF+ + G P+ +Y ++ FC +G++ A + M R +P+V +Y L
Sbjct: 171 YELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 230
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ +++A+DL M +KG VP+ ++YTTL++ LC K+ A L+ M C
Sbjct: 231 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 290
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D V YN ++ G+CR GR +A ++ ++M + CLP+ ++Y LV G C+ + A+
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350
Query: 363 YMQLM-ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + G P ++ G+ + EA ++E++ AP+ T+ ++ +
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
C + EVL + K ++ T ++E G +
Sbjct: 411 CKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTD 445
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 136/267 (50%), Gaps = 5/267 (1%)
Query: 185 AFDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRIL 242
A+++ K V P+ +Y+ ++ FC G++ A + +M R G+ PDV +Y +
Sbjct: 28 AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSV 87
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLCR +++RA +++ +M KG PD +++ L+ C +K+ EA KL + C
Sbjct: 88 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSC 147
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMP--SNGCL-PNLVSYRTLVGGLCDQGMFDV 359
D V + ++ G CRE R +A ++ ++M +G P++V+Y L+ G C G +
Sbjct: 148 RLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEK 207
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K + +M + P+ +L+ G C G +D+A + + G P+ T+ ++
Sbjct: 208 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 267
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDT 446
+CA +++ +++E+ DT
Sbjct: 268 GLCAAHKVDAARLLMDEMTATCCPADT 294
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 140/323 (43%), Gaps = 35/323 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + +S ++A+K M C P + +L L + L A D
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD-LDQALD 245
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ G +PN +Y ++ C + A L ++M D SY L+ G C
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK-VKGCNPDI 306
R ++ A L ++M K +PD ++YT L+ C +L EA LL MK G +PD+
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL------------------- 347
V Y+ VV G+ R R ++A + +++M + PN V+Y +L
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN 425
Query: 348 ------------VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ GLC + A ++ M++K P +++I C +G +DEA
Sbjct: 426 VDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485
Query: 396 CGVLEELLKAGEAPHEDTWVMIV 418
+L + G P T+ ++
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLL 508
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 13/352 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L A ++ + + P + L+ Y + A + F+ M
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+C P ++ F L G+ P+ +Y+I++ +
Sbjct: 321 AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A +M R V P+ +Y L+ GLC+ +VN A+++L+++ PD ++YT
Sbjct: 381 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTI 436
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ LC + EA LL M K P + +N+V+ CR G +A K+L M ++G
Sbjct: 437 VIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 496
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG--------FSPHFSVSHALIKGFCN 388
P +V+Y TL+ G G ++A + ++M K P + S ALI+G C
Sbjct: 497 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFS-ALIRGLCK 555
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
++D+A V+EEL P E+ + IV + E+ G+++N I KV
Sbjct: 556 AREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMK-VKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ +Y ++N LC+ + +AY++L M+ K PD+V Y+TV+ GFC++G AC+
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 328 VLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+L +M + +G P++V+Y ++V GLC G D A + ++ M KG P ALI G+
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 387 CNVGKVDEACGVLEELL 403
CN KVDEA + +E+L
Sbjct: 127 CNARKVDEALKLYKEIL 143
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 6/333 (1%)
Query: 97 TYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
TY LI K+GR + + D ++T K E P + ++ LI Y + D AL+
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLT-KGEVAP-SAVMYNALIGGYCDVGKLDVALQYR 242
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ N ++ L A+ + + K+G P+ +YNI++ +C
Sbjct: 243 EDMVQRGIAMTVATYNLLMHALFMDAR-ASDAYAVLEEMQKNGFSPDVFTYNILINGYCK 301
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G+ A +F +M ++GV +Y L+ RK QV L + KG PD +
Sbjct: 302 EGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVM 361
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+NS C + AY+++ M+ K PD + YNT++ GFC GR +A ++++M
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G P+LVSY TL+ G +G A + M+ KGF+P +ALI+G C + + D
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD 481
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+A +++E++ G P + T++ ++ + +E
Sbjct: 482 DAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 160/347 (46%), Gaps = 11/347 (3%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
L+ L A F+L DI P+ + F +++ + P RAL+ R M
Sbjct: 91 LLSSLPSAPAFALFADIY----RLRLPLCTTTFNIMLRHLCATGKPVRALELLRQM---- 142
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISI 219
+P N ++ R ++ A ++ + + G+ P+ +Y ++ +C G +
Sbjct: 143 PRPNAVTYNTVIAGFCA-RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMED 201
Query: 220 AYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A +F++M +G V P Y L+ G C +++ A+ EDM+ +G +Y L+
Sbjct: 202 AVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLM 261
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++L + +AY +L M+ G +PD+ YN ++ G+C+EG A +V E+M G
Sbjct: 262 HALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVR 321
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
V+Y +L+ +G + + + KG P + +ALI C G ++ A +
Sbjct: 322 ATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEI 381
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ E+ K P + T+ ++ C +++ +++E+ K I+ D
Sbjct: 382 MAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPD 428
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 153/359 (42%), Gaps = 48/359 (13%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP-KQLNRILELLVTHRNYLR 183
H +PSL L+ A + +L+ + + + P+P L+ +L L +
Sbjct: 45 HLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLSV-PIPVASLHPLLSSLPSA----- 98
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF LF ++ + T ++NIM+R C G A L +M P+ +Y ++
Sbjct: 99 PAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVI 154
Query: 244 QGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG- 301
G C + +V A++++ +M +G PD +Y TL++ C+ ++ +A K+ M KG
Sbjct: 155 AGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGE 214
Query: 302 CNPDIVHYNTVVLGFCREG-----------------------------------RAIDAC 326
P V YN ++ G+C G RA DA
Sbjct: 215 VAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAY 274
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
VLE+M NG P++ +Y L+ G C +G A + + M KG +LI F
Sbjct: 275 AVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVF 334
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G+V E + +K G P + ++ C G +ME+ E++ E+ K I D
Sbjct: 335 SRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPD 393
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 153/318 (48%), Gaps = 1/318 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
T +T L+ + + A+ F M C P P ++ L R A L
Sbjct: 141 TAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCG-AGRTREAETL 199
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
A G PN YN ++ +C GD+ +A +F +M G P+V +Y L+ G C+
Sbjct: 200 LSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCK 259
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+++RA+ L M++ G VP+ ++YT L+ C +L AY+LL M+ G P+
Sbjct: 260 SRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWT 319
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
+ ++ C+ R +A +L + G N + Y +L+ GLC G F A + MQ ++
Sbjct: 320 CSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLV 379
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
S+GF P +LI G C ++ EA VL+++++ G P T+ +I+ ++ +
Sbjct: 380 SQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGAD 439
Query: 429 KLGEVLNEIVKVEIKGDT 446
++L++++ IK D
Sbjct: 440 GSKKILDKMIAAGIKPDV 457
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 169/338 (50%), Gaps = 19/338 (5%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY LI + +S DRA+ F M++ P +++ + L A+
Sbjct: 244 SPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD-GQLDCAY 302
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L +S G++PN + ++++ A C + + A L + ++G+ + Y L+ GL
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ + A L++ ++++GFVPD +Y++L++ LCR+K+L EA +L M KG P
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSP 422
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ RE A + K+L+ M + G P++ +Y V C +G + A+ M
Sbjct: 423 VTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLH 482
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE- 425
M+ G P+ +ALI G+ N+G +A + ++ G P+E+++ +++ + E
Sbjct: 483 MVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542
Query: 426 ---------------EMEKLGEVLNEIVKVEIKGDTRI 448
EM+ L +L E+VK+++ + I
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDI 580
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 24/304 (7%)
Query: 143 SNLPDRALKTFRSMLEFNC--KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
S +P R L+T+ +++ C LP + LL + G P+
Sbjct: 65 SRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLL------------------RAGFAPD 106
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+ +Y + +C G ++ A LF M RG + +Y L+ GLC V A+ +
Sbjct: 107 SHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFA 166
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G PD Y T+++ LC + REA LL +G P++V YN ++ G+C G
Sbjct: 167 GMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVG 226
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A V E M NGC PN+ +Y L+ G C D A M+ G P+
Sbjct: 227 DLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYT 286
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNE 436
ALI+G C+ G++D A +L+ + +G P+E T +++ +C GE LG ++ +
Sbjct: 287 ALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQK 346
Query: 437 IVKV 440
+KV
Sbjct: 347 GIKV 350
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 150/394 (38%), Gaps = 50/394 (12%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
Q + + Y LI L +A F+ D ++ TL S+ + ++ LI
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELS 404
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLV------------------------------- 176
A+ M+E +P P I++ LV
Sbjct: 405 EAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464
Query: 177 ---THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
H + A + HGV PN +YN ++ + G S A++ F M G
Sbjct: 465 RSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCK 524
Query: 234 PDVESYRILMQGLCRKSQVNRA----------------VDLLEDMLNKGFVPDTLSYTTL 277
P+ ESY +L++ L +K N LLE+M+ + Y
Sbjct: 525 PNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCF 584
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L SLCR +L EA LL M+ P Y +++ CR +A ++ M +G
Sbjct: 585 LTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGY 644
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P L SYR ++ LC++G AK+ M+SK ++ LI G G V E
Sbjct: 645 IPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSS 704
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+L + + P + + + +I +++++
Sbjct: 705 LLSVMEEKNYRPSDALYARLTGKITDANDIQEIA 738
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 51/305 (16%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L ++ G +P+ +Y+ ++ C ++S A + + M E+GV P +Y I++ L
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R+ + + +L+ M+ G PD +YT + S C + ++ +A ++ M G P++V
Sbjct: 434 REVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV 493
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV------------------- 348
YN ++ G+ G A + M +NGC PN SY L+
Sbjct: 494 TYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSI 553
Query: 349 --------------------------------GGLCDQGMFDVAKKYMQLMISKGFSPHF 376
LC D AK + M S +P
Sbjct: 554 WKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSE 613
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
V ++I C + + EA ++ ++K+G P +++ I+ +C ++ +V +
Sbjct: 614 DVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGD 673
Query: 437 IVKVE 441
++ E
Sbjct: 674 MLSKE 678
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N ++ R D MP+ NL +Y TL+ C G +K+++ ++
Sbjct: 45 NAFLMALARHRMLADMESFASRMPAR----NLRTYTTLINAYCLAGDLPASKRHLSSLLR 100
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEAC 396
GF+P + + G+C G + AC
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHAC 127
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 163/340 (47%), Gaps = 9/340 (2%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
P LA + F +A +Q ++H S Y +++ + + + + PV+ F
Sbjct: 159 PKLAYKFFIWAGQQEGYQHGTSMYNLVMKVFAECGEVKAMWRLFEEMMDKGLPVSSRTFH 218
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
LI ++ L R ++ F FN +P N IL L+T Y L + H+
Sbjct: 219 LLICASGKAGLRRRLVEGFIKSSTFNYRPFRNAFNAILHTLLTIEQY-----SLIEWVHE 273
Query: 195 HGVL----PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+L P+ +YN++MRA G + + L ++M G+ PD+ +Y +L+ L +
Sbjct: 274 KMILEGYSPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGD 333
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A++LL M + G VP+ L +T L++ L R L M KGC+PD+V Y
Sbjct: 334 KPLAALNLLNYMSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYT 393
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ + G +A + +DM G LPN+ +Y +++ GLC G FD A ++ M S
Sbjct: 394 VMISSYVAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSH 453
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G +P+FSV +L+ + GK +A V++ + G H
Sbjct: 454 GCTPNFSVYSSLVSRLRSAGKDTQANNVIKYMTDKGHYLH 493
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 36/298 (12%)
Query: 176 VTHRNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V Y + A+ F + + G T YN++M+ F G++ + LF +M ++G+
Sbjct: 153 VNRERYPKLAYKFFIWAGQQEGYQHGTSMYNLVMKVFAECGEVKAMWRLFEEMMDKGLPV 212
Query: 235 DVESY-------------RILMQGLCRKSQVN-----RAVDLL----------------- 259
++ R L++G + S N A + +
Sbjct: 213 SSRTFHLLICASGKAGLRRRLVEGFIKSSTFNYRPFRNAFNAILHTLLTIEQYSLIEWVH 272
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E M+ +G+ PD L+Y ++ + KL + ++LL M G PD+ YN ++ +
Sbjct: 273 EKMILEGYSPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGKG 332
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ + A +L M GC+PN++ + L+ GL G + K + MI KG P
Sbjct: 333 DKPLAALNLLNYMSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCY 392
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I + G+ +EA +++L G+ P+ T+ ++ +C E +K +L ++
Sbjct: 393 TVMISSYVAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDM 450
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 5/256 (1%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--D 147
N+R + + ++ L + +SLI+ + + E Y +P + TY + + A+ L D
Sbjct: 244 NYRPFRNAFNAILHTLLTIEQYSLIEWVHEKMILEGY--SPDVLTYNVVMRAKYMLGKLD 301
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+ + M P N +L +L L A +L G +PN + +
Sbjct: 302 QFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGDKPL-AALNLLNYMSDVGCVPNVLHFTNL 360
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ G++ F++M ++G PDV Y +++ + A +DML +G
Sbjct: 361 IDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEEAQRFFDDMLLRGQ 420
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P+ +Y +++ LC + +A+ +L M GC P+ Y+++V G+ A
Sbjct: 421 LPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTPNFSVYSSLVSRLRSAGKDTQANN 480
Query: 328 VLEDMPSNGCLPNLVS 343
V++ M G +L+S
Sbjct: 481 VIKYMTDKGHYLHLLS 496
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 172/350 (49%), Gaps = 4/350 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+ +E+ + PN +++ T + K+GR + D ++T K E P ++ L
Sbjct: 541 IMREMRERGGIAPN-QYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKP-EAVMYNAL 597
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I Y + D AL M+E N ++ L A++L + G
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKG 656
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P+ +YNI++ C G++ A +F M RGV V +Y L+ L +K QV
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L ++ + +G PD + Y L+NS + A++++ M+ K PD V YNT++ G
Sbjct: 717 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR +A K++++M G P+LV+Y TL+ G +G A + M++KGF+P
Sbjct: 777 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 836
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ALI+G C G+ D+A +++E+++ G P + T++ ++ + +E
Sbjct: 837 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 5/333 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRIL 172
DI+ ++ E + P+ +TY +I + + D A+K F ML + KP N ++
Sbjct: 540 DIMREMR-ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 598
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A + GV +YN+++ A +G + AY L +M +G+
Sbjct: 599 GGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 657
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV +Y IL+ G C++ V +A+++ E+M +G ++YT L+ +L +K +++E K
Sbjct: 658 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 717
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L +G PD+V YN ++ G A +++ +M P+ V+Y TL+ GLC
Sbjct: 718 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 777
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D A+K + M +G P + LI G+ G V +A + E++ G P
Sbjct: 778 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 837
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C + + ++ E+V+ I D
Sbjct: 838 TYNALIQGLCKNGQGDDAENMVKEMVENGITPD 870
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 6/272 (2%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF LF + + T ++NIM+R C G + A L +M P+ +Y ++
Sbjct: 471 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 526
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG- 301
G C + +V A+D++ +M +G + P+ +Y T+++ C+ ++ EA K+ M KG
Sbjct: 527 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 586
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YN ++ G+C +G+ A + M G + +Y LV L G A
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 646
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M KG +P + LI G C G V +A + E + + G T+ ++ +
Sbjct: 647 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 706
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++++ ++ +E V+ I+ D + A I
Sbjct: 707 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 172/350 (49%), Gaps = 4/350 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+ +E+ + PN +++ T + K+GR + D ++T K E P ++ L
Sbjct: 94 IMREMRERGGIAPN-QYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKP-EAVMYNAL 150
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I Y + D AL M+E N ++ L A++L + G
Sbjct: 151 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKG 209
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ P+ +YNI++ C G++ A +F M RGV V +Y L+ L +K QV
Sbjct: 210 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L ++ + +G PD + Y L+NS + A++++ M+ K PD V YNT++ G
Sbjct: 270 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 329
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR +A K++++M G P+LV+Y TL+ G +G A + M++KGF+P
Sbjct: 330 CLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 389
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ALI+G C G+ D+A +++E+++ G P + T++ ++ + +E
Sbjct: 390 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 162/333 (48%), Gaps = 5/333 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRIL 172
DI+ ++ E + P+ +TY +I + + D A+K F ML + KP N ++
Sbjct: 93 DIMREMR-ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 151
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A + GV +YN+++ A +G + AY L +M +G+
Sbjct: 152 GGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 210
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV +Y IL+ G C++ V +A+++ E+M +G ++YT+L+ +L +K +++E K
Sbjct: 211 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDK 270
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L +G PD+V YN ++ G A +++ +M P+ V+Y TL+ GLC
Sbjct: 271 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 330
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D A+K + M +G P + LI G+ G V +A + E++ G P
Sbjct: 331 LLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 390
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C + + ++ E+V+ I D
Sbjct: 391 TYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 6/264 (2%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF LF + + T ++NIM+R C G + A L +M P+ +Y ++
Sbjct: 24 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 79
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG- 301
G C + +V A+D++ +M +G + P+ +Y T+++ C+ ++ EA K+ M KG
Sbjct: 80 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YN ++ G+C +G+ A + M G + +Y LV L G A
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M KG +P + LI G C G V +A + E + + G T+ ++ +
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 259
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
++++ ++ +E V+ I+ D
Sbjct: 260 SKKGQVQETDKLFDEAVRRGIRPD 283
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 1/294 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + N A+ M+E KP N I++ L + + AFD FK +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERK 219
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +Y ++ C + S A L + M ++ + P+V +Y L+ + +V A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L E+M+ PD ++Y++L+N LC ++ EA ++ M KGC D+V YNT++ G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ R D K+ +M G + N V+Y TL+ G G D A+++ M G SP
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ L+ G C+ G++++A + E++ K T+ ++ +C ++E+
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K E + L+T+ +I + AL ML+ +P + +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ RN + A L + G P+ +YN ++ + C ++ A+ F ++ +G
Sbjct: 162 VNGF-CRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ P+V +Y L+ GLC S+ + A LL DM+ K P+ ++Y+ LL++ + K+ EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L M +PDIV Y++++ G C R +A ++ + M S GCL ++VSY TL+ G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + K + M +G + + LI+GF G VD+A ++ G +P
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ +++ +C E+EK + ++ K E+ D
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 129/257 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF K P+ +N ++ A + +L KM G+ D+ ++ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C QV+ A+ +L ML G+ PD ++ +L+N CR+ ++ +A L+ +M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YN ++ C+ R DA +++ G PN+V+Y LV GLC+ + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI K +P+ AL+ F GKV EA + EE+++ P T+ ++ +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 422 CAGEEMEKLGEVLNEIV 438
C + +++ ++ + +V
Sbjct: 306 CLHDRIDEANQMFDLMV 322
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P + TY LI + D A + F M+ C N ++ + +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR-VED 348
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
LF+ + G++ NT +YN +++ F GD+ A F++M G+ PD+ +Y IL+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ +A+ + EDM + D ++YTT++ +C+ K+ EA+ L C + +KG P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV Y T++ G C +G + + M G + N + G ++ + +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELI 520
Query: 365 QLMISKGFSPHF 376
+ M+S G++P
Sbjct: 521 KKMLSCGYAPSL 532
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 3/292 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + P++ TY L+ S+ A + M++ P + +L+ V +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF+ + + P+ +Y+ ++ C + I A +F+ M +G + DV SY
Sbjct: 277 LE-AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V + L +M +G V +T++Y TL+ + + +A + +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PDI YN ++ G C G A + EDM ++V+Y T++ G+C G + A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ KG P ++ G C G + E + ++ + G ++ T
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M + P + + L+ + + + + + L + M G D ++ ++N
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ A +L +M G PD V ++V GFCR R DA +++ M G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y ++ LC + A + + + KG P+ AL+ G CN + +A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++K P+ T+ ++ ++ + E+ E+V++ I D
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++N A+DL DM+ P + + LL+++ + KK L +M+V G D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N V+ FC + A +L M G P+ V+ +LV G C + A + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G+ P +A+I C +V++A +E+ + G P+ T+ +V +C
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 428 EKLGEVLNEIVKVEI 442
+L++++K +I
Sbjct: 242 SDAARLLSDMIKKKI 256
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 181/394 (45%), Gaps = 39/394 (9%)
Query: 53 SNSKSPIGSPCRVQKLIA--SQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
++ P+ + + Q L A Q DP A + + A + +F Y +I KLG
Sbjct: 30 ASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGA 89
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
L+ ++ ++ E + V + + Y L D A+
Sbjct: 90 LDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV-------------------- 129
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L++ N L+P F G+ +T YN ++ + + +++++M R
Sbjct: 130 --DLIL---NQLQPLF---------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ PDV ++ LM+ LCR QV AV +LE+M ++G PD ++TTL+ + + A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ RM GC+ V N ++ G+C+ GR DA ++ ++G P+ ++Y T V G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC A K M +M+ +G P + ++ C G+++EA G+L +++ G P
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
T+ ++ +C G +E E L+ +V +KG
Sbjct: 356 ITTFNTLIAALCTGNRLE---EALDLARQVTVKG 386
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 143/282 (50%), Gaps = 3/282 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ ++ + A M++ C P N ++ L T N L A D
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG-NRLEEALD 377
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + GV P+ ++NI++ A C GD +A LF +M G PD +Y L+ LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +A+DLL+DM + G T++Y T+++ LC+K ++ EA ++ +M ++G + + +
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C++ + DA +++ M S G PN ++Y +++ C QG A ++ M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ GF LI G C G+ A VL + G P
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 135/257 (52%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+++ A + + G P+ +YNI++ C NG + A + N+M +RG +PD+
Sbjct: 298 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 357
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ L+ LC +++ A+DL + KG PD ++ L+N+LC+ A +L M
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K GC PD V YNT++ C G+ A +L+DM S GC + ++Y T++ GLC +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A++ M +G S + + LI G C K+D+A ++ +++ G P+ T+ I
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Query: 418 VPQICAGEEMEKLGEVL 434
+ C +++K ++L
Sbjct: 538 LTHYCKQGDIKKAADIL 554
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 164/342 (47%), Gaps = 1/342 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ L+ L RA +L + S + FT L++ + E + AL+ M
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE C +N ++ + A + G P+ +YN + C N
Sbjct: 243 LEMGCSATKVTVNVLINGYC-KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 301
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A + + M + G PDV +Y I++ LC+ Q+ A +L M+++G +PD ++ T
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ +LC +L EA L ++ VKG +PD+ +N ++ C+ G A ++ E+M ++G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P+ V+Y TL+ LC G A ++ M S G + +I G C +++EA
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V +++ G + + T+ ++ +C ++++ E++N+++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 10/322 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFN 160
KLGR ++D L ++ E P TY + +++ ALK M++
Sbjct: 263 KLGR------VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P N ++ L + L A + G LP+ ++N ++ A C + A
Sbjct: 317 HDPDVFTYNIVVNCLCKN-GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L ++ +GV PDV ++ IL+ LC+ + A+ L E+M N G PD ++Y TL+++
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC KL +A LL M+ GC + YNT++ G C++ R +A +V + M G N
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++ TL+ GLC D A + + MIS+G P+ ++++ +C G + +A +LE
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 401 ELLKAGEAPHEDTWVMIVPQIC 422
+ G T+ ++ +C
Sbjct: 556 TMTANGFEVDVVTYGTLINGLC 577
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP TY LI +AL + M C N I++ L + + A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIEEAE 481
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F G+ N ++N ++ C + I A+ L N+M G+ P+ +Y ++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + +A D+LE M GF D ++Y TL+N LC+ + + A K+L M++KG P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYMQ 365
YN V+ R DA + +M G P+ ++Y+ + GLC G A +M
Sbjct: 602 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 661
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M+ KGF P FS L +G N+G D
Sbjct: 662 EMVDKGFIPEFSSFRMLAEGLLNLGMDD 689
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN N TY ++ + DIL T+ + + V + LI ++
Sbjct: 528 QPN----NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
ALK R M +P PK N +L+ L RN +R A LF+ + G P+ +Y I+
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLF-RRNNIRDALSLFREMAEVGEPPDALTYKIV 642
Query: 208 MRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGL 246
R C G I A+ +M ++G +P+ S+R+L +GL
Sbjct: 643 FRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL +F ML+ N +P + NR+L +V + Y LFK G+ N + +I
Sbjct: 22 DDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKY-ETVVSLFKEMEFRGIKYNVCTLSI 80
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FCF + +++F K +RG PDV + L+ G+CR + A LL++M G
Sbjct: 81 LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VPD ++ +L+ C + K+ + K+ M KG PD+ Y+ + G+C+ + +A
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ ++M G +PN V+Y TL+ LC A+ + M + G SP L+ GF
Sbjct: 201 ELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGF 260
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G +DE + +E+ + P + +I+ +C +++ EVL+ ++ +K D
Sbjct: 261 CKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDV 320
Query: 447 RIVEA 451
A
Sbjct: 321 HTYTA 325
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 135/253 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L K G +P+ + N +MR +C G I +F+ M +G+ PDV SY I +
Sbjct: 129 AAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFIN 188
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ +++ A++L ++M ++G VP+ ++Y TL+ +LC+ + R+A L +M G +P
Sbjct: 189 GYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSP 248
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ Y+T++ GFC++G + + ++M P+LV Y ++ G+C AK+ +
Sbjct: 249 DILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVL 308
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+I +G P AL+ G C G + EA + ++ + G P ++ +++
Sbjct: 309 SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQH 368
Query: 425 EEMEKLGEVLNEI 437
+ + ++++E+
Sbjct: 369 NDTSTVVQLIHEM 381
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 1/202 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF GV+PN +YN +++A C A LF KM G+ PD+ +Y L+
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C++ ++ + L ++M + PD + YT ++N +CR +K+++A ++L R+ V+G P
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKP 318
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ Y +V G CREG I+A ++ M +GC+P SY L+ G + +
Sbjct: 319 DVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLI 378
Query: 365 QLMISKGFSPHFSVSHALIKGF 386
M +GF +V+ +K F
Sbjct: 379 HEMADRGFYAD-AVTRTFLKDF 399
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR--NYLRPAFDLF 189
+FT LI + A + M C P N ++ + + +R F L
Sbjct: 112 IFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLM 171
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
S G+ P+ SY+I + +C I A LF++M RGV+P+ +Y L++ LC+
Sbjct: 172 VS---KGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQA 228
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A L M G PD L+Y+TLL+ C++ L E L M+ + PD+V Y
Sbjct: 229 LRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVY 288
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
++ G CR + DA +VL + G P++ +Y LV GLC +G A + + M
Sbjct: 289 TIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEE 348
Query: 370 KGFSPHFSVSHALIKG 385
G P + L++G
Sbjct: 349 DGCMPGSCSYNVLLQG 364
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + Y L+ + + D L F+ M KP I+ + R ++ A
Sbjct: 246 LSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRK-VKDA 304
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ G+ P+ +Y ++ C G I A LF KM E G MP SY +L+QG
Sbjct: 305 KEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + + V L+ +M ++GF D ++ T L + L
Sbjct: 365 CLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFL 400
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%)
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L +A RM + P I+ +N ++ R + + ++M G N+ +
Sbjct: 21 LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ C D + +GF P + LI G C +GK + A G+L+E+ G
Sbjct: 81 LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P T ++ C+ +++K+ ++ + +V +K D
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDV 180
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 157/325 (48%), Gaps = 5/325 (1%)
Query: 123 SEHYPVTPS----LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++H +PS + L+ Y ++ A + M + P + N +L+ L+
Sbjct: 162 TDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLL-R 220
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + + L G+LP+ +Y+ + A C D A +F +M R + +
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y +++ GLCR V A E+M++ G PD +Y L+N LC+ +L+EA LL M
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+IV Y T+V GF +EG+ +A +L++M S G PN + Y L+ GLC G
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ MI G P + L++G D A +L E+ +G P+ ++ +++
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIK 443
+C E ++ G +L E++ +K
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLK 485
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AFD+ K GV PN Y+ ++R C G + A L +M + G+ PD +Y LMQ
Sbjct: 367 AFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQ 426
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G ++ + A +LL +M N G +P+ SY ++N LC+ + +EA LL M +G P
Sbjct: 427 GHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKP 486
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ Y +++G +EG AC+ LE M P+L Y +L+ GL G + A++Y
Sbjct: 487 NAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYY 546
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ +G P LI G+C G +++A +L ++L +G P+ DT+ ++
Sbjct: 547 AQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKS 606
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+ EK+ +L ++ K D I
Sbjct: 607 NDYEKVSSILQSMLGSGDKPDNHI 630
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 1/347 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I +A+ F + ++ + + +I S + A M
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+++ P ++ L + L+ A L G+ PN Y ++ F G
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKG-SRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGK 363
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A+ + +M GV P+ Y L++GLC+ Q+ RA LL++M+ G PDT +Y
Sbjct: 364 TAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNP 423
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ ++ A++LL M+ G P++ Y ++ G C+ G + +A +LE+M S G
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PN Y L+ G +G +A + ++ M P ++LIKG VG+++EA
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ K G P E T+ ++ C +EK ++L +++ +K
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 152/323 (47%), Gaps = 3/323 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ Y L+ + + A + M+ +P + ++ L R A
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGR-A 402
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K K G+ P+T +YN +M+ D A+ L N+M G++P+V SY I++ G
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + A +LLE+M+++G P+ Y L+ ++ + A + L +M +PD
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN+++ G GR +A + + G +P+ +Y L+ G C G + A + ++
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M++ G P+ L++G+ ++ +L+ +L +G+ P + +++ + E
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642
Query: 426 EMEKLGEVLNEIVKVEIKGDTRI 448
ME VL E+ K + D I
Sbjct: 643 NMEVAFMVLTEVEKNGLVPDLHI 665
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 147/312 (47%), Gaps = 4/312 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P FTY LI Y ++ ++A + R ML KP +LE +Y + +
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ +S G P+ Y I++R + ++ +A+ + ++ + G++PD+ Y L+ G
Sbjct: 614 -SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 672
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + + +AV LL++M +G P + Y L++ CR + A + + KG P+
Sbjct: 673 LCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPN 732
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y ++ G C+ G DA + ++M G P+ Y L G D + A +
Sbjct: 733 CVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 792
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M ++G++ + S+ + L+ GFC GK+ E +L ++ P+ T +V +
Sbjct: 793 EMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAG 851
Query: 426 EMEKLGEVLNEI 437
++ + V E+
Sbjct: 852 KLGEAHRVFAEL 863
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 139/306 (45%), Gaps = 2/306 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + D +L + + +T L++ Y +SN ++ +SM
Sbjct: 560 TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L KP ++ L N + AF + K+G++P+ Y+ ++ C D
Sbjct: 620 LGSGDKPDNHIYGIVIRNLSRSEN-MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD 678
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L ++M + G+ P + Y L+ G CR ++RA ++ + +L KG VP+ ++YT
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ C+ + +A+ L M +G PD YN + G C + ++ L + N
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG-CSDAADLEQALFLTEEMFNR 797
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
N+ + TLV G C +G +K + +M+ + P+ ++ F GK+ EA
Sbjct: 798 GYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAH 857
Query: 397 GVLEEL 402
V EL
Sbjct: 858 RVFAEL 863
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 143/304 (47%), Gaps = 3/304 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ F Y LI +++ A + M + N P N +++ L T + A
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST-VGRMEEA 542
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + K G++P+ +Y+ ++ +C G++ A L +M G+ P+ ++Y L++G
Sbjct: 543 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + + +L+ ML G PD Y ++ +L R + + A+ +L ++ G PD
Sbjct: 603 YFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 662
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y++++ G C+ A +L++M G P +V Y L+ G C G A+
Sbjct: 663 LHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFD 722
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+++KG P+ ALI G C G + +A + +E+L G AP + ++
Sbjct: 723 SILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAA 782
Query: 426 EMEK 429
++E+
Sbjct: 783 DLEQ 786
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 1/324 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
DIL + S ++ LI+ + RA K + M++ +P N +++
Sbjct: 369 DILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGH 428
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ AF+L G+LPN SY IM+ C NG+ A L +M G+ P+
Sbjct: 429 FQQHDK-DGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPN 487
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
Y L+ G ++ ++ A + LE M PD Y +L+ L ++ EA +
Sbjct: 488 AFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYA 547
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+++ +G PD Y+ ++ G+C+ G A ++L M ++G PN +Y L+ G
Sbjct: 548 QVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSN 607
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
++ +Q M+ G P + +I+ ++ A VL E+ K G P +
Sbjct: 608 DYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYS 667
Query: 416 MIVPQICAGEEMEKLGEVLNEIVK 439
++ +C +MEK +L+E+ K
Sbjct: 668 SLISGLCKIADMEKAVGLLDEMAK 691
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 1/269 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ PN +Y ++ + + D ++ M G PD Y I
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ L R + A +L ++ G VPD Y++L++ LC+ + +A LL M +G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P IV YN ++ GFCR G A V + + + G +PN V+Y L+ G C G A
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAF 753
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M+ +G +P V + L G + +++A + EE+ G A + + +V
Sbjct: 754 DLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGF 812
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
C ++++ ++L+ ++ EI + + VE
Sbjct: 813 CKRGKLQETEKLLHVMMDREIVPNAQTVE 841
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+T ++++ + G + A + M + G+ P L++ L R + L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
M G +PD +Y+T + + C+ + A K+ M+ + C + V YN ++ G CR
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G +A E+M G P+ +Y L+ GLC AK + M G P+ V
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+ GF GK EA +L+E++ AG P++ + ++ +C ++ + ++L E++
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410
Query: 439 KVEIKGDT 446
KV ++ DT
Sbjct: 411 KVGLRPDT 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K V P+ YN +++ G + A + ++ +RG++PD +Y L+ G C+ +
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+A LL MLN G P+ +YT LL + + +L M G PD Y V+
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
R A VL ++ NG +P+L Y +L+ GLC + A + M +G
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLE 695
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P +ALI GFC G + A V + +L G P+ T+ ++ C ++ ++
Sbjct: 696 PGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDL 755
Query: 434 LNEIVKVEIKGDTRI 448
E++ I D +
Sbjct: 756 YKEMLDRGIAPDAFV 770
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 39/242 (16%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RALKT 152
N Y I+I L R++ + ++ + E + P L Y I + D +A+
Sbjct: 628 NHIYGIVIRNLSRSENMEVA--FMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGL 685
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M + +P N +++ + R A ++F S G++PN +Y ++ C
Sbjct: 686 LDEMAKEGLEPGIVCYNALIDGFCRSGDISR-ARNVFDSILAKGLVPNCVTYTALIDGNC 744
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRIL------------------------------ 242
NGDI+ A+ L+ +M +RG+ PD Y +L
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSL 804
Query: 243 ----MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ G C++ ++ LL M+++ VP+ + +++ + KL EA+++ ++
Sbjct: 805 FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
Query: 299 VK 300
K
Sbjct: 865 QK 866
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 174/391 (44%), Gaps = 36/391 (9%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A+ L NKM + DV + ++ LC+ V+ A++L ++M KG P+ +
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ +DM
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC----- 387
P++ +Y +L+ G C D AK+ + M+SK P + LIKGFC
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 388 ------------------------------NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ G D A V ++++ G P T+ ++
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +C ++EK EV + + K EIK D I
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 168/348 (48%), Gaps = 5/348 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K F L+ I + K + ++ +L+TY LI + + AL M++
Sbjct: 16 LLSAIAKMKKFDLV--ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P L+ +L H + A L + G P+T ++ ++ + S
Sbjct: 74 LGYEPSIVTLSSLLNG-YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L ++M +RG P++ +Y +++ GLC++ ++ A +LL M D + + T++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+SLC+ + + +A L M+ KG P++V Y++++ C GR DA ++L DM
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PNLV++ L+ +G F A+K MI + P ++LI GFC ++D+A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E ++ P DT+ ++ C + +E E+ E+ + GDT
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 5/336 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +F +I + D
Sbjct: 147 QPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F+ M +P + ++ L ++ + A L + + PN ++N +
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMIEKKINPNLVTFNAL 261
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G A L + M +R + PD+ +Y L+ G C ++++A + E M++K
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +Y TL+ C+ K++ + +L M +G D V Y T++ G +G +A K
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G P++++Y L+ GLC+ G + A + M + +I+G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
GKVD+ + L G P+ T+ ++ +C+
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 4/339 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L K E + P++ TY LI A + M+E P N
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ V ++ A L K + P+ +YN ++ FC + + A +F M +
Sbjct: 261 LIDAFVKEGKFVE-AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PD+++Y L++G C+ +V +L +M ++G V DT++YTTL+ L A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ +M G PDI+ Y+ ++ G C G+ A +V + M + ++ Y T++ G
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C G D + KG P+ + +I G C+ + EA +L+++ + G P
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
T+ ++ + E++ E+ GD +
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
LP+ +N ++ A + +L KM G+ ++ +Y IL+ CR+SQ++ A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
LL M+ G+ P ++ ++LLN C K++ +A L+ +M G PD + + T++ G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+A +A +++ M GC PNLV+Y +V GLC +G D+A + M +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + +I C VD+A + +E+ G P+ T+ ++ +C+ ++L+++
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 438 VKVEI 442
++ +I
Sbjct: 247 IEKKI 251
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%)
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P + LL+++ + KK L +M+ G + ++ YN ++ FCR + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L M G P++V+ +L+ G C A + M+ G+ P LI G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
K EA +++ +++ G P+ T+ ++V +C +++ +LN++ +I+ D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 448 I 448
I
Sbjct: 187 I 187
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+DLF S GV PN +YN M+ C + AY L KM E G +PD +Y L++
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 11/329 (3%)
Query: 95 NSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
N TY LI L +G+ K + + + + + + P +TY L+ + A
Sbjct: 273 NDTYNCLIHGYLSIGKWK-----EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
F SM+ KP ++ T + L DL ++G+ P+ +NI+
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYAT-KGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
A+ I A +FNKM ++G+ PDV +Y L+ LC+ +V+ AV M+N+G P
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ + +L+ LC K +A + M +G PD+V +NT++ C +G+ + A +++
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ M G P ++SY TL+GG C G D A K + +M+S G P + L+ G+C
Sbjct: 507 DLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRA 566
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G++D+A GV E+L+ G P T+ I+
Sbjct: 567 GRIDDAYGVFREMLRNGITPGVVTYSTIL 595
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 156/320 (48%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I ++ + DRA F+ M++ KP N ++ ++ + +
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW-KEV 292
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + HG+ P+ +Y ++ C NG A LF+ M +G+ P+V Y IL+ G
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHG 352
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K ++ DLL M+ G PD + + + +K + EA + +MK +G +PD
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V+Y ++ C+ GR DA M + G PN+ + +LV GLC ++ AK++
Sbjct: 413 VVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+++G P + ++ C G+V +A +++ + + G P ++ ++ C
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+++ + L+ ++ V +K D
Sbjct: 533 RIDEAAKSLDVMLSVGLKPD 552
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 170/388 (43%), Gaps = 25/388 (6%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNS--TYLILI---LKLGRAKY----FSLI 114
RV +S ++ L +F+ R+ + + TY ILI ++GR ++ F LI
Sbjct: 61 RVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLI 120
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF-RSMLEFNCKPLPKQLNRILE 173
LKS + V + L+K ++ A+ + M E C P N +L+
Sbjct: 121 ------LKS-GWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLK 173
Query: 174 LLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ L A G PN SY I++ F G + AY LF +M +RG
Sbjct: 174 GFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRG 233
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ P+V +Y ++ GLC+ V+RA + + M++KG PD +Y L++ K +E
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVV 293
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++L M G PD Y +++ C GR +A + + M G PN+ Y L+ G
Sbjct: 294 RMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGY 353
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+G + LM+ G SP + + + + +DEA + ++ + G +P
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++ +C KLG V + ++K
Sbjct: 414 VNYGALIDALC------KLGRVDDAVLK 435
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 9/365 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ +R +N L+ L AK DIL+ E TP + +Y L+K +
Sbjct: 122 KSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPE-LGCTPDVVSYNTLLKGFCNEKR 180
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY----LRPAFDLFKSAHKHGVLPNT 201
+ AL+ M + + P N + +V + + + A++LF G+ PN
Sbjct: 181 AEEALELLHMMADSQGRSCPP--NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNV 238
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+Y ++ C + A +F +M ++GV PD ++Y L+ G + V +LE+
Sbjct: 239 VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G PD +Y +LLN LC + REA L M KG P++ Y ++ G+ +G
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ +L M NG P+ + + + M D A M +G SP A
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI C +G+VD+A +++ G AP+ + +V +C ++ EK E E++
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 442 IKGDT 446
I+ D
Sbjct: 479 IRPDV 483
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 2/325 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+ +FD R+ + + + Y ILI S + D+L + +F +
Sbjct: 327 ARFLFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
YA+ + D A+ F M + P +++ L + A F GV
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK-LGRVDDAVLKFNQMMNEGV 444
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN +N ++ C A + +M +G+ PDV + ++ LC K QV +A
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L++ M G P +SYTTL+ C ++ EA K L M G PD YNT++ G+C
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R GR DA V +M NG P +V+Y T++ GL F AK+ MI+ G +
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624
Query: 378 VSHALIKGFCNVGKVDEACGVLEEL 402
+ + ++ G VDEA + + L
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSL 649
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 4/256 (1%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y+I++ FC G + + F + + G + L++GLC ++ A+
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 257 DLL-EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM---KVKGCNPDIVHYNTV 312
D+L + M G PD +SY TLL C +K+ EA +LL M + + C P++V Y V
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GF EG+ A + +M G PN+V+Y T++ GLC + D A+ Q MI KG
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + LI G+ ++GK E +LEE+ G P T+ ++ +C +
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 433 VLNEIVKVEIKGDTRI 448
+ + +++ IK + I
Sbjct: 330 LFDSMIRKGIKPNVAI 345
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+++ LI YA M+E P N I+ + + A +F
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN-IIFTAYAKKAMIDEAMHIFN 402
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ G+ P+ +Y ++ A C G + A FN+M GV P++ + L+ GLC
Sbjct: 403 KMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD 462
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ +A + +MLN+G PD + + T+L +LC K ++ +A +L+ M+ G P ++ Y
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYT 522
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T++ G C GR +A K L+ M S G P+ +Y TL+ G C G D A + M+
Sbjct: 523 TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
G +P ++ G + EA + ++ +G+ + W+
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK--QWNIWI 625
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 151/343 (44%), Gaps = 4/343 (1%)
Query: 112 SLIDDIL-ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
++ID+ + I K + ++P + Y LI + D A+ F M+ P
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ L T + A + + G+ P+ +N ++ C G + A L + M
Sbjct: 452 NSLVYGLCTVDKW-EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G P V SY L+ G C +++ A L+ ML+ G PD +Y TLL+ CR ++
Sbjct: 511 RVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+AY + M G P +V Y+T++ G R +A ++ +M ++G N+ Y ++
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GL D A K Q + SK F + + +I G+ ++A + + G
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
P T+ +I + +E+ ++ + + K ++R++ A
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 4/271 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY-TLFNKMFERGVMPDVESYR 240
L F F K G N N +++ C + A L +M E G PDV SY
Sbjct: 110 LEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYN 169
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLN---KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
L++G C + + A++LL M + + P+ +SY ++N + ++ +AY L M
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM 229
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G P++V Y TV+ G C+ A V + M G P+ +Y L+ G G +
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ ++ M + G P +L+ CN G+ EA + + +++ G P+ + ++
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ + ++ ++LN +V+ + D I
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHI 380
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 139/334 (41%), Gaps = 10/334 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFN 160
KLGR +DD ++ + V P++F + +Y + ++A + + ML
Sbjct: 425 KLGR------VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
+P N IL L T ++ A L + G P SY ++ C G I A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMK-AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ M G+ PD +Y L+ G CR +++ A + +ML G P ++Y+T+L+
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L ++ EA +L M G +I YN ++ G + +A K+ + + S
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ ++ ++G L G + A + S G P + + G ++E +
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ K+G P+ +V ++ ++ + G L
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ +YN ++ +C G I AY +F +M G+ P V +Y ++ GL + + A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M+ G + Y +LN L + + EA+KL + K +I +N ++
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ GR DA + + S G +P++ +Y + L ++G + M G +P+
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ +AL++ + G + A L +L + + T M++ + E
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDE 777
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP-----AFD 187
+T LI + D A K+ ML KP N +L Y R A+
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH------GYCRAGRIDDAYG 574
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F+ ++G+ P +Y+ ++ S A L+ M G ++ Y I++ GL
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + V+ A L + + +K F + ++ ++ +L + + +A L + G PD+
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y + EG + + M +G PN LV L +G A Y+ +
Sbjct: 695 TYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKL 754
Query: 368 ISKGFSPHFSVSHALI 383
K FS S + LI
Sbjct: 755 DEKNFSLEASTTAMLI 770
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+L S+ + + + F +I +S + A+ F ++ + P I E L+
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLI-EE 706
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
YL DLF + K G PN++ N ++R GDI+ A K+ E+ + +
Sbjct: 707 GYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTT 766
Query: 240 RILMQGLCRKSQVNRAVDLLE 260
+L+ L R + A L E
Sbjct: 767 AMLISLLSRDEYHHHATSLPE 787
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 162/336 (48%), Gaps = 5/336 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF---KSAHKHGVLPNTKSYNIMMRAFC 212
M E C P N +L+ L N + A +L G P+ SY ++ F
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +RG++PDV +Y ++ LC+ +++A+++L M+ G +PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C + +EA L +M+ G PD+V Y+ ++ C+ GR ++A K+ + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P + +Y TL+ G +G + LM+ G P V LI + N GKV
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
D+A V ++ + G P+ T+ ++ +C +E
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 151/293 (51%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ ++ A K F SM + KP +L+ T + L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT-KGALVEM 355
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ ++I++ A+ G + A +F+KM ++G+ P+ +Y ++
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V A+ E M+++G P + Y +L++ LC K A +L+ M +G +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ E M G PN+++Y TL+ G C G D A K +
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P+ LI G+C + ++++A + +E+ +G +P T+ +I+
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 148/314 (47%), Gaps = 7/314 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T +I + + D+A T+ ML+ P N I+ L + + A ++ +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA-MDKAMEVLNTM 257
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K+GV+P+ +YN ++ +C +G A KM GV PDV +Y +LM LC+ +
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + + M +G P+ +Y TLL K L E + LL M G +PD ++ +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + +G+ A V M G PN V+Y ++G LC G + A Y + MI +G
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE---EMEK 429
SP V ++LI G C K + A ++ E+L G + + I+ C E EK
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 430 LGEVLNEIVKVEIK 443
L E++ V++ +K
Sbjct: 498 LFELM---VRIGVK 508
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY +I ++ D+A++ +M++ P N IL + + A
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV P+ +Y+++M C NG A +F+ M +RG+ P++ +Y L+QG
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD ++ L+ + + K+ +A + +M+ +G NP+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPN 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y V+ C+ GR DA E M G P + Y +L+ GLC ++ A++ +
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + E +++ G P+ T+ ++ C
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+M++ ++L+ +V V +K +T
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNT 546
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 130/262 (49%), Gaps = 4/262 (1%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ A V P+ +Y I++ C G + + + + ++G D ++ L++G
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 246 LCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM---KVKG 301
LC + + A+D+ L M G +P+ SY LL LC + + +EA +LL M + G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y TV+ GF +EG + A +M G LP++V+Y +++ LC D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M+ G P ++++ G+C+ G+ EA G L+++ G P T+ +++ +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C + ++ + + K +K
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLK 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 133/263 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + G+ PN +Y ++ C +G + A F +M + G+ P Y L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ RA +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ YNT++ G+C G+ +A K+L M S G PN V+Y TL+ G C + A
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M S G SP + +++G + A + + ++G T+ +I+ +C
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 425 EEMEKLGEVLNEIVKVEIKGDTR 447
+ + ++ + +++K + R
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEAR 652
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 3/339 (0%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y+ IL A + +L+ K + P+ TY +I I +S + A+ F
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M++ P N ++ L T + R A +L G+ NT +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWER-AEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ + LF M GV P+V +Y L+ G C +++ A+ LL M++ G P+T++Y+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL+N C+ ++ +A L M+ G +PDI+ YN ++ G + R A ++ + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G L +Y ++ GLC + D A + Q + + +I VG+ DEA
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ G P+ T+ ++ I +E+L ++
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 4/268 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYR 240
L F + K G + ++ +++ C + S A + +M E G +P+V SY
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
IL++GLC +++ A++LL M + G PD +SYTT++N ++ +AY M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD+V YN+++ C+ A +VL M NG +P+ ++Y +++ G C G
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A +++ M S G P L+ C G+ EA + + + K G P T+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ + ++ +L+ +V+ I D
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPD 370
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 218 SIAYTLFNKMFERG---VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + +N+M G V PD+ +Y IL+ CR +++ L +++ KGF D +++
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125
Query: 275 TTLLNSLCRKKKLREAYKL-LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T LL LC K+ +A + L RM GC P++ YN ++ G C E R+ +A ++L M
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 334 SN---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G P++VSY T++ G +G D A M+ +G P +++I C
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLG 431
+D+A VL ++K G P T+ I+ C +G+ E +G
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 23/330 (6%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
N Y LI L + +++++ + + F +I + + + K F
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M+ KP N ++ + A L G+ PNT +Y+ ++ +C
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLA-GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A LF +M GV PD+ +Y I++QGL + + A +L + G + +
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 274 YTTLLNSLCRKKKLREAYKL---LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
Y +L+ LC+ K +A ++ LC M +K + +N ++ + GR +A +
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLK---LEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
SNG +PN +YR + + QG+ + + M G + G N
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD--------SGMLNF- 726
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ ELL+ GE T++ ++ +
Sbjct: 727 -------IVRELLQRGEITRAGTYLSMIDE 749
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 3/258 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY LI Y + D A+K M+ KP + ++ + + A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC-KISRMEDA 565
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LFK GV P+ +YNI+++ + A L+ ++ E G ++ +Y I++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + A+ + +++ + ++ ++++L + + EA L G P+
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y + +G + ++ M NGC + +V L +G A Y+
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745
Query: 366 LMISKGFSPHFSVSHALI 383
++ K FS S + I
Sbjct: 746 MIDEKHFSLEASTASLFI 763
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 3/313 (0%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++ TY L+ + + D A + M E +P N ++ L + A
Sbjct: 187 APNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCK-AGRMEDAR 245
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F + G+ P+ SYN ++ +C G + A +F +M ++GV+PDV ++ L+ +
Sbjct: 246 KMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR + RAV L+ M +G + ++T L++ CR L +A + M+ P +
Sbjct: 306 CRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN ++ G+C+ GR +A +++ +M + G P++V+Y T++ G C G D A + +
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRK 425
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ KG P +LI+G C ++ +AC + E++L+ G P E T+ ++ C
Sbjct: 426 MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485
Query: 427 MEKLGEVLNEIVK 439
++K + +E++K
Sbjct: 486 VQKALSLHDEMIK 498
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 3/296 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PSL Y ++ ++++LP A + SML P N ++ L
Sbjct: 117 APSLLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G PN +YN ++ AFC G++ A L M E GV P + ++ ++ GL
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGL 235
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A + ++M +G PD +SY TL++ C+ L EA + M KG PD+
Sbjct: 236 CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDV 295
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V + +++ CR G A ++ M G N ++ L+ G C G D A M+
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M P + LI G+C +G++DEA ++ E+ G P T+ I+ C
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC 411
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 16/337 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LI + RA ++ ++ + FT LI + + D AL + M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E +P N ++ + A +L G+ P+ +Y+ ++ +C GD
Sbjct: 357 RECRIQPSVVCYNVLINGYCK-LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A+ L KM ++GV+PD +Y L++GLC + ++ A +L E ML G PD +YTT
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT 475
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ C++ +++A L M KG PD+V Y+ ++ G + R +A ++L +
Sbjct: 476 LIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYED 535
Query: 337 CLPNLVSYR---------------TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+P+ + Y L+ G +G+ + A K Q M+ + + SV
Sbjct: 536 PVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSV 595
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
LI G C G + +A ++LL+ G +P+ + + +V
Sbjct: 596 LIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLV 632
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 3/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP +Y L+ Y ++ AL F M + P ++ + N L A
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGN-LERA 314
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G+ N ++ ++ FC NG + A +M E + P V Y +L+ G
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A +L+ +M KG PD ++Y+T+L+ C+ A++L +M KG PD
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y++++ G C E R DAC++ E M G P+ +Y TL+ G C +G A
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
MI KG P LI G + EA
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEA 524
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 4/350 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y LI L +A+ ++L +K TP TY LI +S + A F
Sbjct: 164 YSALIHGLCKARKMDCALEMLAQMKKAF--CTPDTITYNVLIDGLCKSGDVEAARAFFDE 221
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
MLE CKP N ++ N + L + +G + +Y ++ N
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
I A L K+ G P + +Y L+ GLC+ ++ A+DLL +++ G PD ++YT
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L++ L ++K+ EAYKL M ++G D V Y ++ + G+ A V + M S+
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 401
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC+P++V+ T++ GL G A + + M ++G +P+ V ALI G C K+D A
Sbjct: 402 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 461
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L ++ KA P T+ +++ +C ++E +E+++ K D
Sbjct: 462 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 123/229 (53%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A L K+ G P + +Y L+ GLC+ ++ A+DLL +++ G PD ++YT+
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ L ++K+ EAYKL M ++G D V Y ++ + G+ A V + M S+G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C+P++V+ T++ GL G A + + M ++G +P+ V ALI G C K+D A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L ++ KA P T+ +++ +C ++E +E+++ K D
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
I ELL T + + A ++K+ HG +P+ + + M+ G I A +F M R
Sbjct: 379 IRELLQTGK--IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 436
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P+ Y L+ GLC+ +++ A+++L M PDT++Y L++ LC+ + A
Sbjct: 437 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 496
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
M GC PD+ YN ++ GFC+ G AC V +DM S+ C N+V+Y L+ G
Sbjct: 497 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISG 556
Query: 351 LCDQGMFDVAKKYMQLMISKG 371
LC + A Y Q M +G
Sbjct: 557 LCKRRQLTKASLYFQHMKERG 577
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 2/278 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A L + +G P +YN ++ C G + A L K+ + G PDV +Y
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL ++ + A L ++M +G DT+ YT L+ L + K+ +A + M G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD+V +T++ G + GR A ++ + M + G PN V Y L+ GLC D A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M +P + LI G C G V+ A +E+L+AG P T+ +++
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYL 459
C + L + + I G T + + D+L
Sbjct: 242 CKAGNTDAASHSLAQ--ETTINGCTIDIHTYTAIVDWL 277
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP++ TY L+ + + A+ R +++ C P +++ L + A+
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AY 357
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LFK G+ +T Y ++R G I A +++ M G +PDV + ++ GL
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ AV + + M +G P+ + Y+ L++ LC+ +K+ A ++L +MK C PD
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 477
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN ++ G C+ G A ++M GC P++ +Y L+ G C G D A
Sbjct: 478 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 537
Query: 367 MISKGFSPHFSVSHALIKGFC 387
M S S + ALI G C
Sbjct: 538 MSSSRCSANVVTYGALISGLC 558
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 138/276 (50%), Gaps = 3/276 (1%)
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+T + L+K G+ NT + NI++ +FC + A+++ + + G P
Sbjct: 20 ITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPS 79
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
++ L++GLC + ++ A+ L + M +GF PD L+Y TL+N LC+ ++L EA L
Sbjct: 80 TATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFS 139
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M KG +P+ Y++++ G C G +A ++ M +P+ +++ TLV LC +G
Sbjct: 140 DMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEG 199
Query: 356 MFDVAKKYMQL---MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
M + K M L M +G P + LI G C+VG++ +A + E++ G+ P
Sbjct: 200 MIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV 259
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
T+ ++ +C + + +L I + D I
Sbjct: 260 TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 295
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N L AF + K G P+T ++ ++R C G I A LF+KM G PDV
Sbjct: 57 HLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 116
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLC+ Q+ A+ L DML KG P+ +Y++L++ LC +EA +L M
Sbjct: 117 TYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 176
Query: 298 KVKGCNPDIVHYNTVVLGFCREG--RAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+ PD + +NT+V C+EG + +D A + E+M G +P+ V+Y TL+ GLC
Sbjct: 177 IHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 236
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A M+ G P L C ++ EA +L+ + P +
Sbjct: 237 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 296
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+++ +C E+E ++ +++ + D R
Sbjct: 297 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVR 329
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 10/302 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
+LG A FS++ DIL K + P T + FT LI+ AL+ F M +P
Sbjct: 60 RLGFA--FSVLGDIL---KLGYQPSTAT-FTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 113
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ L R L A LF G+ PN +Y+ ++ C G A L
Sbjct: 114 DVLTYGTLINGLCKDRQ-LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 172
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQV---NRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
F M R +MPD ++ L+ LC++ + ++A+ L E+M +G +PDT++Y TL++
Sbjct: 173 FYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 232
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC +LR+A L M V G PD+V Y + C+ R +A +L+ + P+
Sbjct: 233 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPD 292
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ Y ++ G+C G + A+ + SKG P +I G C G + EA +
Sbjct: 293 IHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 352
Query: 401 EL 402
E+
Sbjct: 353 EM 354
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 6/261 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + AL F ML P + ++ L ++ + A
Sbjct: 113 PDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW-KEAIR 171
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI---AYTLFNKMFERGVMPDVESYRILMQ 244
LF + ++P+ ++N ++ A C G I I A LF +M ++G++PD +Y L+
Sbjct: 172 LFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIH 231
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ A+ L +M+ G +PD ++Y L + LC+ +L EA LL ++ +P
Sbjct: 232 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 291
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI Y+ V+ G CR G A + + S G P++ +Y ++ GLC QG+ A K
Sbjct: 292 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 351
Query: 365 QLMISKGFSPHFSVSHALIKG 385
M + + S KG
Sbjct: 352 GEMDENDIESYSTFSRNAFKG 372
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P + + L+ + R + + L + M + G +T + L+NS C +L A+ +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L + G P + T++ G C EG+ +A ++ + M G P++++Y TL+ GLC
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A M++KG SP+ +LI G C +G EA + ++ P + T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 414 WVMIVPQIC 422
+ +V +C
Sbjct: 188 FNTLVDALC 196
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 51/126 (40%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P IV ++ ++ R + + M S G N + L+ C A
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ ++ G+ P + LI+G C GK+ EA + +++ G P T+ ++ +C
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 424 GEEMEK 429
++ +
Sbjct: 128 DRQLTE 133
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 7/319 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY LI + + A + M E NC+P + ++ L A
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC-KGGKLDSAT 497
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
F K G+ PN +Y M+ +C G I +A +LF +M E G +E+Y ++ GL
Sbjct: 498 SFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL 557
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ + A M +G P+T++YT+L+N LC+ A+K+ M+ K C P+
Sbjct: 558 SKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNA 617
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y +++ G C+EG+ +DA E + NGC P + +Y TLV GLC +G + A + ++
Sbjct: 618 HTYTSLIYGLCQEGK-VDAA---ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVEN 673
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M KG SP + +L+ C KVD A + + G PH + +++ +C
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733
Query: 427 MEKLGEVLNEIVKVEIKGD 445
E+ + ++K + D
Sbjct: 734 AEEALNIFQSLLKKQWNSD 752
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 204/434 (47%), Gaps = 27/434 (6%)
Query: 12 IVTTVTGAVTFPPKTP--SLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLI 69
+ ++V + FP TP +L+F P P+ + + ++++ P V K+I
Sbjct: 23 VFSSVPTSYPFPKTTPFPNLVFKVLDLISTDPHWPKNPELNRLASTLRPH----HVSKII 78
Query: 70 ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL----KSEH 125
+ + A + F + S++ ++H ++ ++ +L + K + D + I + ++E
Sbjct: 79 NTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNED 138
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ F + I ++S L L +F ++L QL + + + A
Sbjct: 139 ELKRVTDFLHGIS-SSDSGLFGFTLYSFNTLL--------LQLGKF--------DMVTSA 181
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++ GV P+ ++N M+ C G + A +FNK+F+ + PD +Y L+ G
Sbjct: 182 QNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILG 241
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR ++++A ++ + M+ G P++++Y+TL+N LC + ++ EA +L M KG P
Sbjct: 242 HCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPT 301
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y + C GR DA ++ M GC P++ +Y ++ GL G ++A
Sbjct: 302 VYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYH 361
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G P+ +ALI C G+ A + + + G + T+ I+ + +
Sbjct: 362 KMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMD 421
Query: 426 EMEKLGEVLNEIVK 439
++EK V N+++K
Sbjct: 422 DIEKAMVVFNKMLK 435
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 160/354 (45%), Gaps = 19/354 (5%)
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
+ +L+ K + + P FTY LI + + D+A + F M++ C P + ++
Sbjct: 215 EAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLI 274
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L + + A D+ + + G+ P +Y + + + C G + A L M ++G
Sbjct: 275 NGLC-NEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGC 333
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P V++Y ++ GL R ++ A+ + ML +G VP+T++Y L+N LC + + A K
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALK 393
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+ M+ G + YN ++ G A V M +G P +V+Y TL+
Sbjct: 394 IFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+G + A +++ +M P LI GFC GK+D A E+LK G +P++
Sbjct: 454 KRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQW 513
Query: 413 TWVMIVPQICAG----------EEMEKLG-----EVLNEIVKVEIKGDTRIVEA 451
T+ ++ C E ME+ G E N I+ KG+ R EA
Sbjct: 514 TYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN-RFSEA 566
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 142/314 (45%), Gaps = 3/314 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+++TY + I + ++ D A+ RSM + C P + I+ L + A
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLF-RAGKMELA 356
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ K G++PNT +YN ++ C G IA +F+ M G + + ++Y +++G
Sbjct: 357 IGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG 416
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + +A+ + ML G P ++Y TL+ ++ L A + L MK C PD
Sbjct: 417 LFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPD 476
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y ++ GFC+ G+ A +M G PN +Y ++ G C +G DVA +
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G S +A+I G + EA ++ + G P+ T+ ++ +C
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNT 596
Query: 426 EMEKLGEVLNEIVK 439
++ +E+ K
Sbjct: 597 ATNLAFKIFHEMEK 610
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 139/331 (41%), Gaps = 42/331 (12%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ TY +I + + A+ + ML+ P N ++ L T + A
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF-GIAL 392
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI----- 241
+F HG L N ++YN +++ DI A +FNKM + G P V +Y
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452
Query: 242 ------------------------------LMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
L+ G C+ +++ A +ML G P+
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+YT +++ C++ K+ A L RM+ GC+ I YN ++ G + R +A K
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G PN ++Y +L+ GLC ++A K M K P+ +LI G C GK
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
VD A E L + G P DT+ +V +C
Sbjct: 633 VDAA----ERLTENGCEPTIDTYSTLVSGLC 659
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 13/307 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+ +TY +I Y + D AL F M E C + N I+ L + N A
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL-SKGNRFSEA 566
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G+ PNT +Y ++ C N ++A+ +F++M ++ +P+ +Y L+ G
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYG 626
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ +V+ A L E+ G P +Y+TL++ LCR+ + EA +L+ MK KG +P
Sbjct: 627 LCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPS 682
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++++ C+ + A ++ M G P+L Y+ L+ LC + A Q
Sbjct: 683 MEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQ 742
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ K ++ V L+ G G D L + P T++++
Sbjct: 743 SLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIIL------AR 796
Query: 426 EMEKLGE 432
E+ K+G+
Sbjct: 797 ELSKVGK 803
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 128/329 (38%), Gaps = 57/329 (17%)
Query: 163 PLPKQLNRILELLVTHRNYLR-PAFDLFKSA---HKHGVLPNTK---------SYNIMMR 209
P P + ++L+L+ T ++ + P + S H + NT Y I R
Sbjct: 38 PFPNLVFKVLDLISTDPHWPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKR 97
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR-KSQVNRAVDLLEDML--NKG 266
F + D+ ++ N++ + ++ + RILM CR + ++ R D L + + G
Sbjct: 98 HF-YKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSG 156
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
TL +NT++L + A
Sbjct: 157 LFGFTL----------------------------------YSFNTLLLQLGKFDMVTSAQ 182
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
V + S+G P+L+++ T++ LC +G A + P +LI G
Sbjct: 183 NVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGH 242
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNEIVKVEI 442
C K+D+A V + ++K G P+ T+ ++ +C GE M+ L E+ + ++ +
Sbjct: 243 CRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTV 302
Query: 443 KGDTRIVEA--GIGLEDYLIGKTRSRPRR 469
T + + IG D I RS ++
Sbjct: 303 YTYTVPISSLCDIGRVDDAINLVRSMGKK 331
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 135/260 (51%), Gaps = 3/260 (1%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R A + ++A G + +YN ++ +C G + A L M V PD
Sbjct: 86 RRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAY 142
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +++GLC + +V A+ LL+DML +G P ++YT LL ++C+ EA +L M
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ KGC P+IV YN ++ G CREGR DA ++L + S G P++VSY T++ GLC +
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRW 262
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D K M+ K P+ L++ FC G V+ A VL+++ + G P+ ++
Sbjct: 263 DDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIV 322
Query: 418 VPQICAGEEMEKLGEVLNEI 437
+ IC ++ + LN +
Sbjct: 323 INAICKQGRVDDAYDFLNNM 342
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 8/352 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY ++I + R +IL L S Y P + +Y ++K + D F
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSS--YGFQPDIVSYTTVLKGLCAARRWDDVKVLFA 270
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ C P + ++ + A + + +HG PNT NI++ A C
Sbjct: 271 EMVDKKCVPNEVTFDMLVRFFC-RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + AY N M G PD SY +++GLCR + A +LL +M+ K P+ +++
Sbjct: 330 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T + LC+K + +A KL+ M GC+ IV YN +V GFC +GR A ++ ++P
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP- 448
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
C PN ++Y TL+ GLC D A + + MI K + + L+ FC G V+E
Sbjct: 449 --CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE 506
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
A ++ ++++ G P+ T+ ++ I E+ E+L+ +V + DT
Sbjct: 507 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 129/243 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y ++R C G + A L + M +RG P V +Y +L++ +C+ S A+
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
++L++M KG P+ ++Y ++N +CR+ ++ +A ++L R+ G PDIV Y TV+ G
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D + +M C+PN V++ LV C GM + A + +Q M G +P+
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
++ + +I C G+VD+A L + G P ++ ++ +C E E+L E
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376
Query: 437 IVK 439
+V+
Sbjct: 377 MVR 379
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 177/380 (46%), Gaps = 17/380 (4%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLI--LILKLGRAKYFSLIDDILITL 121
R+++LIA A+ + +SR + YL LI L R S +L T
Sbjct: 45 RLRRLIARDDLAEAARLVETSSSRG----EAPDVYLCTKLIRNLCRRGRTSDAARVLRTA 100
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHR 179
++ PV + L+ Y D A + SM P+P ++ + R
Sbjct: 101 EASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM------PVPPDAYTYTPIIRGLCDR 154
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A L + G P+ +Y +++ A C + A + ++M +G P++ +Y
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTY 214
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+++ G+CR+ +V+ A ++L + + GF PD +SYTT+L LC ++ + L M
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K C P+ V ++ +V FCR G A +VL+ M +GC PN ++ +C QG D
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE---DTWVM 416
A ++ M G +P +++G C G+ + A +L E+++ P+E +T++
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394
Query: 417 IVPQICAGEEMEKLGEVLNE 436
I+ Q E+ KL E++ E
Sbjct: 395 ILCQKGLIEQAIKLIELMPE 414
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 148/313 (47%), Gaps = 3/313 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY +I+ + AL ML+ C+P +LE + +
Sbjct: 136 PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGF-GE 194
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ G PN +YN+++ C G + A + N++ G PD+ SY +++
Sbjct: 195 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 254
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + L +M++K VP+ +++ L+ CR + A ++L +M GC P
Sbjct: 255 GLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP 314
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ N V+ C++GR DA L +M GC P+ +SY T++ GLC G ++ AK+ +
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ K P+ + I C G +++A ++E + + G + T+ +V C
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434
Query: 425 EEMEKLGEVLNEI 437
++ E+ N +
Sbjct: 435 GRVDSALELFNNL 447
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 31/306 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA + ++L + ++ P F I I + L ++A+K M
Sbjct: 353 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412
Query: 157 LEFNCKP-------------LPKQLNRILELL------------------VTHRNYLRPA 185
E+ C + +++ LEL + H L A
Sbjct: 413 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 472
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + N ++N+++ FC G + A L N+M E G P++ ++ L+ G
Sbjct: 473 AELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 532
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + A++LL +++KG DT++Y+++++ L R+ + EA ++L ++ G P
Sbjct: 533 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 592
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ C+ A M SNGC+PN +Y L+ GL +G+ A+ +
Sbjct: 593 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 652
Query: 366 LMISKG 371
+ +KG
Sbjct: 653 ELYAKG 658
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 146/305 (47%), Gaps = 4/305 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T +++ + + A + M+ NC P N + +L + + A L +
Sbjct: 354 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC-QKGLIEQAIKLIELM 412
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++G +YN ++ FC G + A LFN + P+ +Y L+ GLC ++
Sbjct: 413 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERL 469
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +LL M+ K + +++ L++ C+K + EA +L+ +M GC P+++ +NT+
Sbjct: 470 DAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 529
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G ++ + +A ++L + S G + ++Y ++V L + + A + + + G
Sbjct: 530 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 589
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + + ++ C + D+A ++ G P+E T+++++ + +++
Sbjct: 590 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 649
Query: 433 VLNEI 437
VL+E+
Sbjct: 650 VLSEL 654
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F+ +PN TY L+ L A+ ++L + + P+ F L+
Sbjct: 440 ALELFNNLPCEPN----TITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLV 495
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP-----------LPKQLN--RILELL--------- 175
+ + + A++ M+E C P + K N LELL
Sbjct: 496 SFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVS 555
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + A + + G+ P YN ++ A C + A
Sbjct: 556 LDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDF 615
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
F M G MP+ +Y IL++GL + + A +L ++ KG + +L
Sbjct: 616 FAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 664
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 194/406 (47%), Gaps = 16/406 (3%)
Query: 40 SPSSPEQQQESSIS--NSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN----FRH 93
+P +P +SIS + +P +P V ++I SQ +P A F++AS + H
Sbjct: 90 NPQNPTPNSPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHALFFFNWASNPNPNPNNYSH 149
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S+ Y+ + L FS +L H+ ++ +K Y + A+ F
Sbjct: 150 SHLCYVAITDLLISHGLFSTASSLL----QSHHRLSDFAAAKFVKAYGDRGDIRGAIHWF 205
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL-PNTKSYNIMMRAFC 212
+ N IL + V N + A +F K GV+ P+ +Y ++R +C
Sbjct: 206 HRAKKMESGRCLFSYNAILGVFVK-ANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYC 264
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVPDT 271
G I A +F++M G P++ +Y ++ G C+K + A+ +++ M + +PDT
Sbjct: 265 KMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDT 321
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++YTTL++ C++ +L EA K + M + C P+++ YN ++ G C G +A +++
Sbjct: 322 VTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTR 381
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M NG N+ ++ +++ GLC G D A ++++ M+ G ++ +C +GK
Sbjct: 382 MRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGK 441
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
D+A +L+E+ G P ++ + + + +K G +L ++
Sbjct: 442 ADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQM 487
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 165/367 (44%), Gaps = 13/367 (3%)
Query: 76 LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
+LA+ +FD ++ + STY +I + ++ + P+L TY
Sbjct: 234 MLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVF-----DEMGCKPNLVTY 288
Query: 136 --LIKIYAESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+I + + L + A+K M E +C P +++ R L A +
Sbjct: 289 NTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCK-RGELEEAMKYMEEM 347
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
PN +YN ++ C NG++ A + +M G+ +V ++ +++GLC ++
Sbjct: 348 VSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKL 407
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A L++M+ G D +Y ++N C+ K +A LL MK +G NP + +N V
Sbjct: 408 DDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAV 467
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKG 371
G+ A +L M GC PN +SY T++ GLC +G ++++ M G
Sbjct: 468 FRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNG 527
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE---EME 428
S+ L+KG+C G D A + E+L G + ++++ V + A E E+E
Sbjct: 528 HHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVE 587
Query: 429 KLGEVLN 435
K E ++
Sbjct: 588 KFFEEMS 594
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 148/296 (50%), Gaps = 13/296 (4%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
I +LL++H A L +S H+ K ++A+ GDI A F++ +
Sbjct: 157 ITDLLISH-GLFSTASSLLQSHHRLSDFAAAK----FVKAYGDRGDIRGAIHWFHRAKKM 211
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLRE 289
+ SY ++ + +++ A + + ++ +G V PD +YTT++ C+ +
Sbjct: 212 ESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIEN 271
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLV 348
A + M GC P++V YNT++ GFC++G A K+++ M + C+P+ V+Y TL+
Sbjct: 272 AKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLI 328
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C +G + A KYM+ M+S+ P+ +A+I G C G VDEA ++ + G
Sbjct: 329 DGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLK 388
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYL-IGKT 463
+ T I+ +C +++ L E+V + ++ D + G+ + +Y IGK
Sbjct: 389 DNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAY--GVVVNEYCKIGKA 442
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 104 KLGRAKYFSLIDDILITLKS-EHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFN 160
K+G+A DD + LK + + PS+ F + +I ES D+A R M +
Sbjct: 438 KIGKA------DDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLG 491
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C P + +++ L + + + ++G + Y+ +++ +C +G+ +A
Sbjct: 492 CTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMA 551
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
LF +M + G + ++ES+ ++GL K + E+M + D Y +L+
Sbjct: 552 MRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDE 611
Query: 281 -LCR 283
LC+
Sbjct: 612 HLCK 615
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 2/182 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ ++ Y + D A+ + M P N + +LV + + +
Sbjct: 429 YGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGL-ILRQM 487
Query: 193 HKHGVLPNTKSYNIMMRAFC-FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G PN SY+ ++ C G + + M G D Y L++G C
Sbjct: 488 KQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGN 547
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A+ L +ML+ G+V + S+ + L K+K E K M + DI Y
Sbjct: 548 ADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRR 607
Query: 312 VV 313
++
Sbjct: 608 IL 609
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 144/257 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A ++F + K G PN +Y+ +M +C +++ A ++FN M + GV PD++SY I
Sbjct: 235 VKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNI 294
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ + A++L E+M + +P+ ++Y +L++ LC+ K+ A KL+ M +G
Sbjct: 295 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 354
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDI+ Y++++ C+ A +L + G PN+ +Y L+ GLC G + A+
Sbjct: 355 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 414
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ KG++ + + +I FCN G EA +L ++ + G P+ T+ +I+ +
Sbjct: 415 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSL 474
Query: 422 CAGEEMEKLGEVLNEIV 438
+E +K ++L E++
Sbjct: 475 FDKDENDKAEKLLLEMI 491
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 122/222 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + + GV P+ +SYNI++ FC A LF +M R ++P+V +Y L+
Sbjct: 273 AKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLID 332
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +++ A+ L+++M ++G PD ++Y++LL++LC+ +A LL ++K +G P
Sbjct: 333 GLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQP 392
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ Y ++ G C+ GR DA + ED+ G N+ +Y ++ C+ GMF A +
Sbjct: 393 NMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAML 452
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M G P+ +I+ + + D+A +L E++ G
Sbjct: 453 SKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRG 494
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ FC G + A +F M ++G P+V +Y LM G C +VN+A + +M G
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD SY L+N C+ K A L M + P++V YN+++ G C+ G+ A K
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
++++M G P++++Y +L+ LC D A + + +G P+ LI G C
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G+ ++A + E+LL G + +T+ +++ C GE L + K+E G
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNN---GMFGEALAMLSKMEENG 459
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y LI + + + D A+ F M P N +++ L + A
Sbjct: 285 VNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCK-SGKISYA 343
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFN--GDISIAYTLFNKMFERGVMPDVESYRILM 243
L H G P+ +Y+ ++ A C N GD +IA L K+ ++G+ P++ +Y IL+
Sbjct: 344 LKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIA--LLTKLKDQGLQPNMYTYTILI 401
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ + A ++ ED+L KG+ + +YT +++ C EA +L +M+ GC
Sbjct: 402 NGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCI 461
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
P+ V Y ++ + A K+L +M + G L
Sbjct: 462 PNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 496
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 1/294 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + N A+ M+E KP N I++ L + + AFD FK +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERK 219
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +Y ++ C + S A L + M ++ + P+V +Y L+ + +V A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L E+M+ PD ++Y++L+N LC ++ EA ++ M KGC D+V YNT++ G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ R D K+ +M G + N V+Y TL+ G G D A+++ M G SP
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ L+ G C+ G++++A + E++ K T+ ++ +C ++E+
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K E + L+T+ +I + AL ML+ +P + +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ RN + A L + G P+ +YN ++ + C ++ A+ F ++ +G
Sbjct: 162 VNGF-CRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ P+V +Y L+ GLC S+ + A LL DM+ K P+ ++Y+ LL++ + K+ EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L M +PDIV Y+++V G C R +A ++ + M S GCL ++VSY TL+ G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + K + M +G + + LI+GF G VD+A ++ G +P
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ +++ +C E+EK + ++ K E+ D
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 129/257 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF K P+ +N ++ A + +L KM G+ D+ ++ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C QV+ A+ +L ML G+ PD ++ +L+N CR+ ++ +A L+ +M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YN ++ C+ R DA +++ G PN+V+Y LV GLC+ + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI K +P+ AL+ F GKV EA + EE+++ P T+ +V +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305
Query: 422 CAGEEMEKLGEVLNEIV 438
C + +++ ++ + +V
Sbjct: 306 CLHDRIDEANQMFDLMV 322
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 11/252 (4%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P + TY L+ + D A + F M+ C N ++ + +
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR-VED 348
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
LF+ + G++ NT +YN +++ F GD+ A F++M G+ PD+ +Y IL+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ +A+ + EDM + D ++YTT++ +C+ K+ EA+ L C + +KG P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV Y T++ G C +G + + M G + N + G ++ + +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELI 520
Query: 365 QLMISKGFSPHF 376
+ M+S G++P
Sbjct: 521 KKMLSCGYAPSL 532
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 3/292 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + P++ TY L+ S+ A + M++ P + +L+ V +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF+ + + P+ +Y+ ++ C + I A +F+ M +G + DV SY
Sbjct: 277 LE-AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V + L +M +G V +T++Y TL+ + + +A + +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PDI YN ++ G C G A + EDM ++V+Y T++ G+C G + A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ KG P ++ G C G + E + ++ + G ++ T
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M + P + + L+ + + + + + L + M G D ++ ++N
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ A +L +M G PD V ++V GFCR R DA +++ M G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y ++ LC + A + + + KG P+ AL+ G CN + +A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++K P+ T+ ++ ++ + E+ E+V++ I D
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++N A+DL DM+ P + + LL+++ + KK L +M+V G D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N V+ FC + A +L M G P+ V+ +LV G C + A + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G+ P +A+I C +V++A +E+ + G P+ T+ +V +C
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 428 EKLGEVLNEIVKVEI 442
+L++++K +I
Sbjct: 242 SDAARLLSDMIKKKI 256
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 171/358 (47%), Gaps = 10/358 (2%)
Query: 48 QESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGR 107
++S S + +P+ R+QKL+ + I + S+Q FR N TY + L
Sbjct: 894 KKSKKSPTATPLTDENRLQKLVQ--------RFIINSESKQ--FRRKNDTYDSTVRFLAV 943
Query: 108 AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
K FS+I++I+ K LI++Y ++ + +A K F + E C+ +
Sbjct: 944 RKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRS 1003
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N +L V + + + + + + + SYNI++ A+C D A FN M
Sbjct: 1004 FNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHM 1063
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ G+ PD+ ++ L+ L RK Q + M NK PD +SY L + K++
Sbjct: 1064 EKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRI 1123
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
++ +LL +M+ K PD+ YNT++ FC++G +A K + + PN +YRTL
Sbjct: 1124 QDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTL 1183
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ LC++G FD + + I+K F H + ++ G V K +EA +L+++ +
Sbjct: 1184 LPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLLKKMFSS 1241
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 10/369 (2%)
Query: 30 IFCYSSS--SQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASR 87
IF +S S S+ + S+P ++ +KS +P ++ + + D + +
Sbjct: 1250 IFNHSRSPTSRFNKSNPSLPSSATQKCNKSTAATPLTAEEHLQNIVDKFIKN------TE 1303
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
FRH TY + L K FSLI+DI+ K T LIK+Y ++ +
Sbjct: 1304 SQRFRHQKGTYDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFS 1363
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNI 206
A K F + E NC+ K N +L V + L +F+ + + + SYNI
Sbjct: 1364 HARKLFDELPELNCERTVKSFNSLLASCVKSKE-LDQVEKIFREVPQEVSIKADVISYNI 1422
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ AFC + A F+ M + G+ P++ ++ L+ L RK Q + M NK
Sbjct: 1423 VINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKN 1482
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD +SY L + +K++++ +LL +M+ K PD+ YN ++ GFC++G +A
Sbjct: 1483 IAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAK 1542
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K + + P +YR L+ LC+QG FD + + I KGF H + ++ G
Sbjct: 1543 KWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVDGL 1602
Query: 387 CNVGKVDEA 395
V K +EA
Sbjct: 1603 AEVSKTEEA 1611
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 168/401 (41%), Gaps = 28/401 (6%)
Query: 13 VTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQ 72
V ++ F P+ SL S ++ +PS P ++ + S + +P+ S +QKL+
Sbjct: 1638 VAILSSKDLFLPEVLSLNEAPGSVNKPNPSPPSATKKCNKSTAATPLTSEQGLQKLVKR- 1696
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
F S FR N TY + L K FS+I+DI+ K
Sbjct: 1697 ---------FIKNSESEKFRRKNDTYFSTVRLLAIHKKFSMIEDIIEAQKKYEEIKEEGF 1747
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR--------- 183
LIK+Y ++ + A K F + E NC+ K N +L + + +
Sbjct: 1748 AIRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNALLTSCANSKEFEQLETMFREVP 1807
Query: 184 ----PAFDLFKSAHKH-----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
FD ++ + + + SYNI++ A+C G + A FN M + G P
Sbjct: 1808 CANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAYCKMGALDKAILFFNDMEKNGTEP 1867
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
++ ++ L+ L K Q + M NK PD +SY L + +K++++ +LL
Sbjct: 1868 NLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDLISYNARLQRMVLEKRIQDGIQLL 1927
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ K P++ Y ++ GFC +G A + + N PN YRTL+ C++
Sbjct: 1928 AEMEEKAIKPNVDSYYILIEGFCEDGDLEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEK 1987
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G FD + + G ++ G V K++EA
Sbjct: 1988 GDFDSGLRLCKESFDNGLVFLAEEVQRVVDGLIEVSKIEEA 2028
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
S+ +LL S + K+L + K+ + + D++ YN V+ FC A D
Sbjct: 1383 SFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHD 1442
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M NG PNLV++ TL+ L +G F ++ M +K +P +A ++G +
Sbjct: 1443 MEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKR 1502
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ + +L ++ + P ++ +++ C ++E+
Sbjct: 1503 IQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEE 1540
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 165/353 (46%), Gaps = 10/353 (2%)
Query: 48 QESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGR 107
++S S + +P+ R+QKL+ + F S FR N TY + L
Sbjct: 37 KKSKKSPTATPLTDENRLQKLV----------QRFIINSESKQFRRKNDTYDSTVRFLAV 86
Query: 108 AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
K FS+I++I+ K LI++Y ++ + +A K F + E C+ +
Sbjct: 87 RKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRS 146
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N +L V + + + + + + + SYNI++ A+C D A FN M
Sbjct: 147 FNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHM 206
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ G+ PD+ ++ L+ L RK Q + M NK PD +SY L + K++
Sbjct: 207 EKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRI 266
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
++ +LL +M+ K PD+ YNT++ FC++G +A K + + PN +YRTL
Sbjct: 267 QDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTL 326
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ LC++G FD + + I+K F H + ++ G V K +EA ++E
Sbjct: 327 LPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVE 379
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 195/386 (50%), Gaps = 11/386 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIF---DYASRQPN--FRHSNSTYLILILKLGRAKYFSLID 115
S R+ L+ ++DP A ++F D S P FR+S Y I+I KLG +K F +D
Sbjct: 8 SSFRLASLLRRENDPSAAIKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELD 67
Query: 116 DILITLKSEHYPV-TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L+ LK++ V T LF +I + LP RAL F M ++ C+ K LN +L
Sbjct: 68 QVLLQLKTDTRIVPTEILFCNVINFFGRGRLPSRALHMFDEMPQYRCQRTVKSLNSLLNT 127
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L+ + + + S + G P+ +YNI++ G A LF++M ++ V P
Sbjct: 128 LLKCGEFEKMK-ERLSSIDEFGK-PDACTYNILIHGCSQRGCFDDALKLFDEMVKKKVKP 185
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
++ L+ GLC+ +V A+ + +DML G P Y +L+ +LC+ +L A+KL
Sbjct: 186 TGVTFGTLIHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASLVKALCQIGELSFAFKL 245
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
D Y+T++ + GR+ + ++LE+M GC P+ V+Y L+ G C
Sbjct: 246 KDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLINGFCV 305
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKG-FCNVGKVDEACGVLEELLKAGEAPHED 412
+ + A + + M+ KG P +S+ +I G + K +EA + E++ + G +P
Sbjct: 306 ENDSESAYRVLDEMVEKGLKPDV-ISYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTL 364
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIV 438
++ ++ +C G + E+ +L+E++
Sbjct: 365 SYRIVFDGLCEGLQFEEAAAILDEML 390
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 142/295 (48%), Gaps = 9/295 (3%)
Query: 130 PSLFTYLIKIY--AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH---RNYLRP 184
P TY I I+ ++ D ALK F M++ KP ++ L + + L+
Sbjct: 150 PDACTYNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKM 209
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
D+ K +GV P Y +++A C G++S A+ L ++ +E + D Y L+
Sbjct: 210 KQDMLKV---YGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLIS 266
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L + + N +LE+M KG PDT++Y L+N C + AY++L M KG P
Sbjct: 267 SLIKAGRSNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKP 326
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YN ++ R + +A + EDMP GC P+ +SYR + GLC+ F+ A +
Sbjct: 327 DVISYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAAIL 386
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
M+ KG+ P ++ C GK++ V+ + + G A W +++P
Sbjct: 387 DEMLFKGYKPRRDRLERFLQKLCESGKLEILSKVISSMHR-GNADDAKVWSVMIP 440
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 161/313 (51%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY LI + A+ F M+ N KP N IL ++
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN-ILVNAFCKDGKMKEG 314
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F K G+ PN +YN +M +C +++ A ++FN M + GV PD++SY I++ G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + + A++L ++M K +PD ++Y++L++ L + ++ A +L+ +M +G P+
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN+++ C+ + A +L G P++ +Y L+ GLC G + A+K +
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG++ +I+GFC G +EA +L ++ G P T+ +I+ + +
Sbjct: 495 DLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Query: 426 EMEKLGEVLNEIV 438
E + ++L E++
Sbjct: 555 ENDMAEKLLREMI 567
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 150/308 (48%), Gaps = 1/308 (0%)
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
+ +N D A+ F +L N P + N+IL LV ++Y L + G+ P
Sbjct: 60 FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHY-HTVLYLSQKMEFRGIKP 118
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N + NI++ FC G I A+++F K+ + G +PD ++ L +GLC K Q+ +A
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFH 178
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ ++ GF D +SY TL++ LC+ + R A LL R+ P++V YNT++ C+
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+A + +M S G P++V+Y L+ G C G A MI + P
Sbjct: 239 KLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF 298
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ L+ FC GK+ E V + ++K G P+ T+ ++ C +E+ K + N + +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 440 VEIKGDTR 447
+ D +
Sbjct: 359 GGVNPDIQ 366
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 132/257 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDLF G+ P+ +Y+ ++ FC G + A LFNKM + PDV ++ I
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C+ ++ + + M+ +G P+ ++Y +L++ C K++ +A + M G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
NPDI Y+ ++ GFC+ + +A + ++M +P++V+Y +L+ GL G A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M +G P+ ++++ C +VD+A +L + G P T+ +++ +
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++E +V +++
Sbjct: 481 CQSGKLEDARKVFEDLL 497
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 135/251 (53%), Gaps = 3/251 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY L+ Y ++A F +M + P + + ++ + + A
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF-DEA 384
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LFK H+ ++P+ +Y+ ++ +G IS A L ++M +RGV P++ +Y ++
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ QV++A+ LL +KGF PD +Y+ L+ LC+ KL +A K+ + VKG N D
Sbjct: 445 LCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLD 504
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ GFC EG +A +L M NGC+P+ +Y ++ L + D+A+K ++
Sbjct: 505 VYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLR 564
Query: 366 LMISKGFSPHF 376
MI++G +F
Sbjct: 565 EMIARGLPLNF 575
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A DL + + V PN YN ++ + C ++ A+ LF++M +G+ PDV +Y L
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++ A+DL M+ + PD ++ L+N+ C+ K++E + M +G
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+ V YN+++ G+C A + M G P++ SY ++ G C FD A
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M K P +LI G G++ A +++++ G P+ T+ I+ +C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446
Query: 423 AGEEMEK 429
+++K
Sbjct: 447 KTHQVDK 453
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 142/283 (50%), Gaps = 7/283 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLR 183
+ P ++T+ L+ + + F M++ KP N +++ LV N
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN--- 347
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +F + + GV P+ +SY+IM+ FC A LF +M + ++PDV +Y L+
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GL + +++ A+ L++ M ++G P+ +Y ++L++LC+ ++ +A LL + K KG
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDI Y+ ++ G C+ G+ DA KV ED+ G ++ +Y ++ G C +G+F+ A
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M G P +I + D A +L E++ G
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N SY+ F N D+ A +LFN++ R P + ++ L + + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ M +G P+ ++ L+N C+ + A+ + ++ G PD + + T+ G C +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ A + + + G + +SY TL+ GLC G A +Q + P+ +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +I C V V+EA + E++ G +P T+ ++ C +++ ++ N+++
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 440 VEIKGDT 446
IK D
Sbjct: 289 ENIKPDV 295
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 197/430 (45%), Gaps = 27/430 (6%)
Query: 34 SSSSQESPSSPEQQQESSISNSKSPIGSPC----------------RVQKLIASQSDPLL 77
+SS ESP + Q +S ++ S I S C ++ ++ + P
Sbjct: 30 ASSVMESPLHEKDQLQSVSTSMDSQIQSRCLVCLGNNSCRTVRSRTKLMNILIEKGKPQE 89
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+ IF+ + + R + TY L+ L R K F I ++ L+ F +I
Sbjct: 90 AQLIFNSLTEE-GHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMI 148
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-----FDLFKSA 192
++ES A+K FR M + CKP N +++ + N P DL +
Sbjct: 149 NAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIK---GYGNAGMPEECLKLLDLM--S 203
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ V PN +++N ++RA+C I+ A+ + KM G+ PDV +Y L + + +
Sbjct: 204 QEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGET 263
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+RA ++ +M N +P+ + ++N C++ K+++A + L RM+ G +P++V +N++
Sbjct: 264 SRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSL 323
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GF + L M G P++V++ T++ G+ D ++ M+ G
Sbjct: 324 IKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGI 383
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P L KG+ G+ ++A +L + K+G P+ + I+ C+ +ME
Sbjct: 384 EPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASR 443
Query: 433 VLNEIVKVEI 442
V ++ ++ I
Sbjct: 444 VYEKMCEMGI 453
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 155/316 (49%), Gaps = 8/316 (2%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
T L+ I E P A F S+ E +P +L L T + + L
Sbjct: 75 TKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAAL-TRQKRFKSIPSLISKLE 133
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K+G+ P++ +N M+ AF +G++ A +F KM +RG P ++ L++G
Sbjct: 134 KNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPE 193
Query: 254 RAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ LL+ M + V P+ ++ +L+ + C KK++ EA+ ++ +M G PD+V YNT+
Sbjct: 194 ECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTL 253
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + G A ++ +M +N +PN + ++ G C +G A +++ M + G
Sbjct: 254 ARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGV 313
Query: 373 SPHFSVSHALIKGFCNVGK---VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
P+ + ++LIKGF ++ VDEA ++EE G P T+ I+ + M+K
Sbjct: 314 HPNLVIFNSLIKGFLDITDTDGVDEALTLMEEF---GVKPDVVTFSTIMNAWSSVGLMDK 370
Query: 430 LGEVLNEIVKVEIKGD 445
E+ +++VK I+ D
Sbjct: 371 CQEIFDDMVKAGIEPD 386
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 142/321 (44%), Gaps = 11/321 (3%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LI 137
++ D S++ N + ++ T+ LI K + +++ + + + P + TY L
Sbjct: 197 KLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASG--LQPDVVTYNTLA 254
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---HRNYLRPAFDLFKSAHK 194
+ YA++ RA M N + +P + R +++ ++ A
Sbjct: 255 RAYAQNGETSRAEGMILEMQ--NNRVMPNE--RTCGIIINGYCKEGKMKDALRFLYRMRN 310
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+GV PN +N +++ F D M E GV PDV ++ +M +++
Sbjct: 311 YGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDK 370
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
++ +DM+ G PD +++ L R + +A LL M G P++V + T++
Sbjct: 371 CQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIIS 430
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G+C G+ A +V E M G PNL ++ TL+ G + A++ +Q+M KG +P
Sbjct: 431 GWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAP 490
Query: 375 HFSVSHALIKGFCNVGKVDEA 395
S + + +G +EA
Sbjct: 491 VKSTIQLVADAWHALGLANEA 511
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 163/339 (48%), Gaps = 4/339 (1%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
FS + + ++L + P+ T + +++ + A+ +F ML P N
Sbjct: 4 FSFLRTLRLSLFPPYPPIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNN 63
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
IL LV ++ Y LFK +G+ P+ + +I++ FC I++A+++F + +R
Sbjct: 64 ILSSLVKNKRY-PTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKR 122
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD + L++GLC + ++ + + + ++ +GF D +SY TL+N LC+ + +
Sbjct: 123 GFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAV 182
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+LL +++ PD+V YNT++ C+ DAC V +M G P++V+Y TL+ G
Sbjct: 183 ARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHG 242
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK---VDEACGVLEELLKAGE 407
C G A + M K +P LI GK VDEA + EE+
Sbjct: 243 FCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNM 302
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P T+ ++ +C +E+ +L E+ + I+ D
Sbjct: 303 IPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDV 341
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 55/408 (13%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-KSEHYPVTPSLF---------- 133
+ QP++ H L+L + L ++IL +L K++ YP SLF
Sbjct: 32 SHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITP 91
Query: 134 -----TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+ LI + A F ++L+ P LN +++ L R ++
Sbjct: 92 DLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLC-FRGEIKKTLYF 150
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
G + SY ++ C G+ L K+ V PDV Y ++ LC+
Sbjct: 151 HDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK 210
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD--- 305
+ A D+ +M+ KG PD ++YTTL++ C K++EA+ LL MK+K NPD
Sbjct: 211 NKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYT 270
Query: 306 -----------------------------------IVHYNTVVLGFCREGRAIDACKVLE 330
IV YN+++ G C+ A +L+
Sbjct: 271 FSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLK 330
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M +G P++ SY L+ GLC G ++AK++ Q ++ KG + + +I G C G
Sbjct: 331 EMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAG 390
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
EA + ++ G P+ T+ I+ + +E +K ++L E++
Sbjct: 391 LFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMI 438
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 4/259 (1%)
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ R + + KP N I+ L ++ L A D++ G+ P+ +Y ++
Sbjct: 184 RLLRKLEGHSVKPDVVMYNTIINSLCKNK-LLGDACDVYSEMIVKGISPDVVTYTTLIHG 242
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR---KSQVNRAVDLLEDMLNKGF 267
FC G + A++L N+M + + PDV ++ +L+ L + K V+ A+ L E+M +K
Sbjct: 243 FCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNM 302
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+PD ++Y +L++ LC+ L A LL MK G PD+ Y ++ G C+ GR A +
Sbjct: 303 IPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKE 362
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ + GC N+ Y ++ GLC G+F A M KG P+ +I
Sbjct: 363 FFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALS 422
Query: 388 NVGKVDEACGVLEELLKAG 406
+ D+A +L E++ G
Sbjct: 423 EKDENDKAEKILREMIARG 441
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ ++P+ +YN ++ C N + A L +M E G+ PDV SY IL+
Sbjct: 290 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 349
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++ A + + +L KG + Y ++N LC+ EA L +M+ KGC P
Sbjct: 350 GLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMP 409
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ + + T++ + A K+L +M + G L
Sbjct: 410 NAITFRTIICALSEKDENDKAEKILREMIARGLL 443
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
T+ +LI LG+ ++D+ + + +H + P + TY LI +++ +RA+
Sbjct: 270 TFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALL 329
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ M E +P +L+ L L A + F+ G N YN+M+ C
Sbjct: 330 KEMKEHGIQPDVYSYTILLDGLCK-GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCK 388
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G A L +KM +G MP+ ++R ++ L K + ++A +L +M+ +G + +
Sbjct: 389 AGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLLKE 445
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 3/303 (0%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P++ TY +I + + + AL F M P N +++ L
Sbjct: 228 KMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFS 287
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ + A L ++P+ ++N+++ C G +S A + M E GV PDV +Y
Sbjct: 288 QW-KEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM G +S+V A L + M+ KG PD SY L+N C+ K++ EA +L M
Sbjct: 347 SSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH 406
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P+ V YNT++ G C+ G +A + ++M +NG LPNL +Y L+ G C QG F
Sbjct: 407 QGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGK 466
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M S P+ + + LI C G + +A + EL G P+ + I+
Sbjct: 467 AFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIIN 526
Query: 420 QIC 422
+C
Sbjct: 527 GLC 529
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P +FTY LI+ + A M N P N +++ + + A
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT-ICKEGKVSEA 327
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ K+ + GV P+ +Y+ +M + ++ A LF+ M +G PDV SY IL+ G
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILING 387
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A L +M+++G P+ +SY TL++ LC+ LREA L M G P+
Sbjct: 388 YCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPN 447
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+ ++ GFC++G A ++ M S PNLV Y L+ +C G A+K
Sbjct: 448 LFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFS 507
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ KG P+ + +I G C G +DEA + + G P E ++ +I+
Sbjct: 508 ELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVII 560
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 164/347 (47%), Gaps = 14/347 (4%)
Query: 96 STYLILILKLGR-AKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT-- 152
+T + + K+G+ A+ L DD++ P ++TY I + + A
Sbjct: 172 TTLINWLCKVGKFAQAMELFDDMVAR------GCRPDVYTYTTIINGLCKIGETAAAAGL 225
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLR--PAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M E C+P + I++ +HR R A D+F G+ P+ +YN +++
Sbjct: 226 LKKMEEAGCQPNVVTYSTIID---SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQG 282
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A L N+M +MPD+ ++ +L+ +C++ +V+ A +L+ M G PD
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y++L+ + ++ EA KL M KGC PD+ YN ++ G+C+ R +A ++
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFN 402
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G PN VSY TL+ GLC G A+ + M + G P+ L+ GFC G
Sbjct: 403 EMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+A + + P+ + +++ +C + ++ +E+
Sbjct: 463 YFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 1/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + +A++ F M+ C+P I+ L A L K
Sbjct: 171 FTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAA-GLLKKM 229
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G PN +Y+ ++ + + ++ A +F+ M +G+ PD+ +Y L+QGLC SQ
Sbjct: 230 EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQW 289
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A LL +M + +PD +++ L++++C++ K+ EA +L M G PD+V Y+++
Sbjct: 290 KEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSL 349
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ ++A K+ + M + GC P++ SY L+ G C D AK+ MI +G
Sbjct: 350 MYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P+ + LI G C +G + EA + + + G P+ T+ +++ C
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 147 DRALKTFRSMLEFNCKPLP--KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D AL +F ML KPLP Q ++L +V Y L K G+ PN +
Sbjct: 79 DDALASFNHMLHR--KPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ F + +A+++ K+ + G+ P + ++ L+ LC+ + +A++L +DM+
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G PD +YTT++N LC+ + A LL +M+ GC P++V Y+T++ ++ R +
Sbjct: 197 RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNE 256
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M G P++ +Y +L+ GLC+ + A + M S P + L+
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
C GKV EA GVL+ + + G P T+
Sbjct: 317 TICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 115/228 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R+ + A LF + G P+ SYNI++ +C I A LFN+M +G+ P+ S
Sbjct: 356 RSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVS 415
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC+ + A +L ++M G +P+ +Y+ LL+ C++ +A++L M+
Sbjct: 416 YNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ 475
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P++V YN ++ C+ G DA K+ ++ G PN Y T++ GLC +G+ D
Sbjct: 476 STYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLD 535
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A + + M G P + +I+GF + A ++ E+ G
Sbjct: 536 EALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY +Y S + A K F +M+ CKP N ++ + + A
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR-IDEA 397
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF G+ PN SYN ++ C G + A LF M G +P++ +Y IL+ G
Sbjct: 398 KQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ +A L M + P+ + Y L++++C+ LR+A KL + VKG P+
Sbjct: 458 FCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPN 517
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y T++ G C+EG +A + +M +GC P+ +SY ++ G A + +
Sbjct: 518 AQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIG 577
Query: 366 LMISKGF 372
M KGF
Sbjct: 578 EMRDKGF 584
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F+Y LI Y + D A + F M+ P N ++ L LR A +
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC-QLGSLREARN 434
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK+ H +G LPN +Y+I++ FC G A+ LF M P++ Y IL+ +C
Sbjct: 435 LFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMC 494
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A L ++ KG P+ YTT++N LC++ L EA + M+ GC PD +
Sbjct: 495 KSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEI 554
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
YN ++ GF A +++ +M G + ++
Sbjct: 555 SYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 145/278 (52%), Gaps = 9/278 (3%)
Query: 136 LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
++ ++ + +PD AL FR++ C P + N +L+ V R + D F ++
Sbjct: 89 VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRF--SDADAFFASLS 146
Query: 195 HG-----VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
HG + PN ++YNI++R+ C GD+ A TLF+ + R V PD +Y LM GL ++
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVH 308
+++ A+DLL++M PD + Y LL + + + ++ ++ K G P++
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN ++ G C+ GR + +V E M +N P++++Y L+ GLC G D A + +I
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G ++ ++L+KGFC G+V EA + AG
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG 364
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +++ K G PN+ YN ++ FC S A +++KM + G P V +Y
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + A + +M+ GF PD +Y +L+ L KK+ +A + ++ KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVA 360
D++ +N ++ G C G+ +A V DM C PNLV+Y TL+ GL + G D A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G P + IKG C+ ++ E +L+E+L G P TW ++V
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 167/368 (45%), Gaps = 44/368 (11%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
++D + P R + +TY +++ L + F + ++ + + + + P + TY I I+
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN--LQPDVITYGILIH 307
Query: 141 A--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL 198
S D A + + +++ N +++ ++ A+ + SA G L
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC-QAGRVQEAWKFWDSAGFAG-L 365
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV--MPDVESYRILMQGLCRKSQVNRAV 256
N ++YNIM++ +G + A L++ + E+ V +PD ++ L+ GLC+ N+A
Sbjct: 366 RNLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLIHGLCQNGFANKAF 424
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ E+ G D SY++++N LC +L +A K+ +M GC P+ YN ++ GF
Sbjct: 425 TIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGF 484
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ R DA ++ M NGC P +++Y TL+ GLC + A + M+ GF+P
Sbjct: 485 CQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDI 544
Query: 377 SVSHALIKGF-----------------------------------CNVGKVDEACGVLEE 401
+ +LI+G C+ GKVDEA V +
Sbjct: 545 TTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604
Query: 402 LLKAGEAP 409
+ + P
Sbjct: 605 MKEKKNCP 612
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 198/497 (39%), Gaps = 79/497 (15%)
Query: 21 TFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKE 80
FPP P L + SPS + P S ++++ S ++
Sbjct: 42 AFPPPQPLLFHLLRRLATSSPSHLPRLLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDA 101
Query: 81 IFDYASRQPNFRHSN---STYLILILKLGRAKYFSLIDDILITLKSEHYP--VTPSLFTY 135
D P+ N ++ L+ RA+ FS D +L + + P+L TY
Sbjct: 102 ALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161
Query: 136 LI---KIYAESNLPDRALKTFRSMLEFNCKP-----------LPKQ--LNRILELLVTH- 178
I + A +L DRA+ F S+ P L KQ L+ L+LL
Sbjct: 162 NIVLRSLCARGDL-DRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 179 RNYLRPAF--------DLFKSAH-------------KHGVLPNTKSYNIMMRAFCFNGDI 217
R+ ++P FK+ G PN +YN+M+ C G
Sbjct: 221 RSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
++ +M + PDV +Y IL+ GLCR V+ A + +++ G V D Y +L
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340
Query: 278 LNSLCRKKKLREAYKLL-------------CRMKVKG----------------------C 302
+ C+ +++EA+K + +KG C
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V + T++ G C+ G A A + E+ +G ++ SY +++ GLC+ G A K
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M G P+ + +ALI GFC V + +A + ++ G +P T+ ++ +C
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520
Query: 423 AGEEMEKLGEVLNEIVK 439
E+ ++ V E+V+
Sbjct: 521 KAEKYQEASSVAREMVE 537
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G++ + YN +++ FC G + A+ ++ G + ++ +Y I+++GL V+
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVD 385
Query: 254 RAVDLLEDMLNKGF--VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++L D+L K +PDT+++ TL++ LC+ +A+ + +V G D+ Y++
Sbjct: 386 EAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C GR +DA KV E M +GC PN Y L+ G C A + M G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP + LI G C K EA V E+++ G P T+ ++ + + ++++
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 432 EVLNEIVKVEIKGDT 446
+ +I+ +K D
Sbjct: 565 SIWKQILYKGLKVDV 579
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+K + M + CKP N ++ +R A ++ +G P +YN +
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT--SDAVRIYSKMADNGCSPTVITYNTL 515
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C A ++ +M E G PD+ +Y L++GL +++ A+ + + +L KG
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDAC 326
D + + L++ LC K+ EA + MK K C P++V YNT++ G G A
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + +G P+++SY T + GLC + + ++S+G P + L++
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695
Query: 387 CNVGKV 392
G +
Sbjct: 696 IKYGPI 701
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 113 LIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
L+D + + K + P+ ++ LI + + A++ + M + C P N
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ L Y + A + + ++G P+ +Y ++R + I A +++ ++ +
Sbjct: 515 LIDGLCKAEKY-QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL-SYTTLLNSLCRKKKLRE 289
G+ DV + IL+ GLC +V+ A+ + DM K P L +Y TL++ L + +
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A L + G PDI+ YNT + G C R + ++L+++ S G +P ++++ LV
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693
Query: 350 GLCDQGMFDV 359
+ G V
Sbjct: 694 AVIKYGPIQV 703
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 28/233 (12%)
Query: 228 FERGVMPD--VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
F R +MPD ++++R L L G P S+ LL++ R +
Sbjct: 93 FSRAIMPDAALDAFRALPSIL-------------------GCNPGIRSHNALLDAFVRAR 133
Query: 286 KLREAYKLLCRMK----VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
+ +A + + P++ YN V+ C G A + + + P+
Sbjct: 134 RFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDR 193
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
++Y TL+ GL Q D A + M P +AL+ G G+ ++ V ++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 402 LLK-AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
L+K G P+ T+ +++ +C +++GEV +V ++ D ++ GI
Sbjct: 254 LVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPD--VITYGI 304
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 171/347 (49%), Gaps = 14/347 (4%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPS-- 131
AKEIF RQ P+ +S LI R ++ +D L+ + + + + P
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSS----LIAVFSRNRH---LDQALVYFRDMKKFGLVPDNV 294
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T L+ Y + ALK MLE C N IL L + L A LF
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK-MLTDADKLFDE 353
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G LP+ ++ ++ C +G+++ A +LF M +R + PD+ +Y L+ G C+ +
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A +L + M+++ P+ ++Y L+N+ C + EA++L M KG P +V NT
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
V+ G+CR G + A + L M + G P+ +SY TL+ G + D A ++ M +G
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + ++ GFC G++ EA VL ++++ G P T+ ++
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 155/313 (49%), Gaps = 2/313 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P T + T L++ N + A + F ML P + ++ + +R +L A
Sbjct: 221 PDTTTYNTLLVESCRRDNFSE-AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR-HLDQAL 278
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
F+ K G++P+ Y ++M +C NG++ A + ++M E+G + DV +Y ++ GL
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + A L ++M+ +G +PD ++TTL++ C+ + +A L M + PDI
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ GFC+ G A ++ + M S PN ++Y L+ C G A + +
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
MI KG P + +IKG+C G +A L ++ G AP ++ ++ +
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Query: 427 MEKLGEVLNEIVK 439
M+K +N++ K
Sbjct: 519 MDKAFLWINKMEK 531
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 3/311 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PSLFTY +I + RA ML P N +L + R+ A +
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL-VESCRRDNFSEAKE 244
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F + GV+P+ S++ ++ F N + A F M + G++PD Y +LM G C
Sbjct: 245 IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + A+ + ++ML +G V D ++Y T+LN LC++K L +A KL M +G PD
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ T++ G C++G A + M P++V+Y TL+ G C G + A + M
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
IS+ P+ LI +C+VG V EA + + +++ G P T ++ C +
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484
Query: 428 EKLGEVLNEIV 438
K E L ++
Sbjct: 485 SKADEFLGRMI 495
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 52/365 (14%)
Query: 121 LKSEHYPVT----PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
L+S+ Y V+ SL L+KI + + RS +E N L +N + +
Sbjct: 74 LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCK--- 130
Query: 177 THRNYLRPAFDLFKS----AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
FD KS +G+ + +YN ++ A+C G + A+ + N M ++G+
Sbjct: 131 ------DGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGL 184
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P + +Y ++ GLC+K + RA +L +MLN G PDT +Y TLL CR+ EA +
Sbjct: 185 KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 244
Query: 293 LLCRMKVKGCNPDIVHYNTVVL-----------------------------------GFC 317
+ M +G PD+V +++++ G+C
Sbjct: 245 IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R G ++A K+ ++M GC+ ++++Y T++ GLC + M A K M+ +G P F
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI G C G + +A + + + P + ++ C EMEK E+ + +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 438 VKVEI 442
+ +I
Sbjct: 425 ISRKI 429
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 128/242 (52%), Gaps = 1/242 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + +AL F +M + N KP N +++ + A +L+
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF-CKVGEMEKASELWDGM 424
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN +Y I++ A+C G +S A+ L++ M E+G+ P + + +++G CR
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A + L M+ KG PD +SY TL+N R+ + +A+ + +M+ +G PDI+ YN V
Sbjct: 485 SKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVV 544
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFCR+GR +A VL M G P+ +Y L+ G Q + A ++ M+ +GF
Sbjct: 545 MNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGF 604
Query: 373 SP 374
+P
Sbjct: 605 AP 606
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 144/308 (46%), Gaps = 1/308 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F LI+ Y ++ + FR + N +L LV +++ A+++ +
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLV-KIDWVELAWEVHRE 108
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ N + NIM+ A C +G + ++M G+ D+ +Y L+ CR+
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A +++ M +KG P +Y ++N LC+K + A +L M G +PD YNT
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++ CR +A ++ +M G +P+LVS+ +L+ D A Y + M G
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + L+ G+C G + EA + +E+L+ G + I+ +C + +
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348
Query: 432 EVLNEIVK 439
++ +E+V+
Sbjct: 349 KLFDEMVE 356
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 85/162 (52%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ AF L+ + G+ P + N +++ +C +GD S A +M +GV PD SY
Sbjct: 448 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 507
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ G R+ +++A + M +G +PD ++Y ++N CR+ +++EA +L +M K
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
G NPD Y ++ G + +A + ++M G P+ V
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 18/251 (7%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV-DLL------ 259
M+ F + +S A L +M R + VE L+ +C N V DLL
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60
Query: 260 -----------EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ +KG++ + +LL L + + A+++ + G ++
Sbjct: 61 ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
N +V C++G+ D L +M NG ++V+Y TL+G C +G+ + A + M M
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
KG P +A+I G C G+ A G+L E+L G +P T+ ++ + C +
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFS 240
Query: 429 KLGEVLNEIVK 439
+ E+ E+++
Sbjct: 241 EAKEIFGEMLR 251
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
K+G + S + D +I+ K + P+ TY LI Y A + + M+E
Sbjct: 410 KVGEMEKASELWDGMISRK-----IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 464
Query: 162 KPLPKQLNRILELLVTHRNYLRP-----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
KP N ++ + Y R A + GV P+ SYN ++ F +
Sbjct: 465 KPTLVTCNTVI------KGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A+ NKM + G++PD+ +Y ++M G CR+ ++ A +L M+ KG PD +YT
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
L+N + L EA++ M +G PD V
Sbjct: 579 LINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 46/377 (12%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL- 132
DP A F + ++Q F H+ +Y I++ LGR + ++ + L +++ +H T L
Sbjct: 90 DPSKALRFFKW-TQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIE-KHSKGTVKLE 147
Query: 133 ---FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
F LI+ YAE+ L ++K F++M
Sbjct: 148 DRFFNSLIRSYAEAGLFKESMKLFQTMKSI------------------------------ 177
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCR 248
V P+ ++N +M G ++A ++++M GV PD +Y +L++G C+
Sbjct: 178 ------AVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCK 231
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM--KVKGCNPDI 306
S V+ +M + D ++Y TL++ LCR K+R A L+ M K +G NP++
Sbjct: 232 NSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNV 291
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y T++ G+C + +A VLE+M S G PN+++Y TLV GLC+ D K ++
Sbjct: 292 VTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLER 351
Query: 367 MISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S GFSP + +I C G +DEA V E + K ++ ++ +C
Sbjct: 352 MKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKG 411
Query: 426 EMEKLGEVLNEIVKVEI 442
+ + ++ +E+ + EI
Sbjct: 412 DYDMAEQLFDELFEKEI 428
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 59/415 (14%)
Query: 96 STYLILILKLGRAKYFSLI-DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
++ + ++LK GR + D++L T Y V+P TY LI+ + ++++ D +
Sbjct: 187 NSLMSILLKRGRTNMAKEVYDEMLGT-----YGVSPDTCTYNVLIRGFCKNSMVDEGFRF 241
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK--HGVLPNTKSYNIMMRA 210
FR M FNC N +++ L +R A +L K G+ PN +Y ++R
Sbjct: 242 FREMESFNCDADVVTYNTLVDGLC-RAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRG 300
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVP 269
+C ++ A + +M RG+ P++ +Y L++GLC ++++ D+LE M + GF P
Sbjct: 301 YCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSP 360
Query: 270 DTL-----------------------------------SYTTLLNSLCRKKKLREAYKLL 294
DT SY+TL+ SLC+K A +L
Sbjct: 361 DTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLF 420
Query: 295 CRMKVK-------GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+ K G P YN + C G+ A +V+ + G + SY T+
Sbjct: 421 DELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGT-QDPQSYTTV 479
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G C +G ++ + + M+ + F P + LI GF K A LE++LK+
Sbjct: 480 IMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSY 539
Query: 408 APHEDTWVMIVPQI----CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
P TW ++ ++ CA E + +L + V+ I T ++ G E +
Sbjct: 540 QPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQH 594
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 121/298 (40%), Gaps = 14/298 (4%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-------FNCKPLPKQLN 169
+ ++K P + ++ LI+ + D A + F + E F KPL N
Sbjct: 384 VFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYN 443
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
I E L H + A + + K G + +SY ++ C G Y L M
Sbjct: 444 PIFESLCEH-GKTKKAERVIRQLMKRGT-QDPQSYTTVIMGHCKEGAYESGYELLMWMLR 501
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
R +PD+E Y L+ G +K + A + LE ML + P T ++ ++L L K E
Sbjct: 502 RDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHE 561
Query: 290 AYKLLCRMKVKGCNPDI-VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+ ++ M K +I + ++ L F RE A +++ + NG V +
Sbjct: 562 SSCVIVMMLEKNVRQNINLSTESLQLLFGREQHE-RAFEIINLLYKNGY---YVKIEEVA 617
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L +G A K + + + + +A I C + KV EA + EL++ G
Sbjct: 618 QFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENG 675
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 173/385 (44%), Gaps = 38/385 (9%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K F L+ + + K PS+ T L+ Y A+ M+E
Sbjct: 48 LLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 107
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P ++ L H N A L + G PN +Y +++ C GDI
Sbjct: 108 MGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 166
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+A+ L NKM + DV + ++ LC+ V+ A++L ++M KG P+ ++Y++L+
Sbjct: 167 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 226
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ +DM
Sbjct: 227 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 286
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC----------- 387
P++ +Y +L+ G C D AK+ + M+SK P + LIKGFC
Sbjct: 287 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 346
Query: 388 ------------------------NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ G D A V ++++ G P T+ +++ +C
Sbjct: 347 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 406
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRI 448
++EK EV + + K EIK D I
Sbjct: 407 NGKLEKALEVFDYMQKSEIKLDIYI 431
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 5/336 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +F +I + D
Sbjct: 146 QPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F+ M +P + ++ L ++ + A L + + PN ++N +
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMIEKKINPNLVTFNAL 260
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G A L + M +R + PD+ +Y L+ G C ++++A + E M++K
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +Y TL+ C+ K++ + +L M +G D V Y T++ G +G +A K
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G P++++Y L+ GLC+ G + A + M + +I+G C
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
GKVD+ + L G P+ T+ ++ +C+
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 476
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 4/339 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L K E + P++ TY LI A + M+E P N
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ V ++ A L K + P+ +YN ++ FC + + A +F M +
Sbjct: 260 LIDAFVKEGKFVE-AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PD+++Y L++G C+ +V +L +M ++G V DT++YTTL+ L A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ +M G PDI+ Y+ ++ G C G+ A +V + M + ++ Y T++ G
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C G D + KG P+ + +I G C+ + EA +L+++ + G P
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
T+ ++ + E++ E+ GD +
Sbjct: 499 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 537
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+DLF S GV PN +YN M+ C + AY L KM E G +PD +Y L++
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 508 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 544
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 124/226 (54%), Gaps = 1/226 (0%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P +Y ++ C GD+ AY L M +G D +Y L+ G CR +++RA +
Sbjct: 254 VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYE 313
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGF 316
LLE+M + FVPD +Y L+ LCR K+L EA LL ++ + C P++V YNT++ GF
Sbjct: 314 LLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGF 373
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
+ R DA ++ +M + G P++V+Y TL+ GLC+ G A Y++ M+ K P
Sbjct: 374 SKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKV 433
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
V ++I G C G++D A V + ++ G P+ + ++ +C
Sbjct: 434 PVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 179/440 (40%), Gaps = 100/440 (22%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI--------YAESN--- 144
+T+ ILI L RA +D+ + + P+ +TY + I AE+
Sbjct: 193 ATWTILIDGLFRAIR---VDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVL 249
Query: 145 --LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+P L + S++ +CK + A+ L + + G +
Sbjct: 250 QEMPVPTLANYTSVIGGHCKA----------------GDMGKAYHLLEDMKRKGYQGDNL 293
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ C +I AY L +M +PD+ +Y IL+ GLCR +++ A DLL +
Sbjct: 294 TYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTL 353
Query: 263 LNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
N+ P+ +SY TL++ + ++ +AY+L M G +PD+V Y+T++ G C GR
Sbjct: 354 RNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGR 413
Query: 322 AIDACKVLEDMP-----------------------------------SNGCLPNLVSYRT 346
A +A LE+M +NGC PNL Y +
Sbjct: 414 ASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNS 473
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG--------- 397
L+ GLC G AK ++ M +G SP LI G C + DEAC
Sbjct: 474 LIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQG 533
Query: 398 -----------------------VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
VL +L G +P + ++ +C + + ++L
Sbjct: 534 IEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLL 593
Query: 435 NEIVKVEIKGDTRIVEAGIG 454
+++ IK D V+A +G
Sbjct: 594 EDMIGAGIKPDGSTVDALVG 613
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 169/401 (42%), Gaps = 50/401 (12%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
+++N S IG C+ D A + + R+ ++ N TY LI R +
Sbjct: 256 TLANYTSVIGGHCKA-------GDMGKAYHLLEDMKRK-GYQGDNLTYNTLIHGHCRLQE 307
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML-----EFNCKPLP 165
++L +KS + P +FTY I I + L R +L E +C P
Sbjct: 308 IDRAYELLEEMKSNDF--VPDIFTYDILIAGLCRA--KRLSEARDLLGTLRNEDDCTPNV 363
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
N +++ + + A+ LF G P+ +Y+ ++R C G S A++
Sbjct: 364 VSYNTLIDGF-SKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLE 422
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
+M + ++P V Y ++ GLCR +++ A + + M+ G P+ Y +L+ LC+
Sbjct: 423 EMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC------------------- 326
+L +A + M +GC+PD V Y T+++G CR R +AC
Sbjct: 483 RLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCN 542
Query: 327 -------------KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
+VL + + G P Y T++ LC + A++ ++ MI G
Sbjct: 543 VVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIK 602
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P S AL+ C K A LEE+++ G P T+
Sbjct: 603 PDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTY 643
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 165/385 (42%), Gaps = 55/385 (14%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY ILI L RAK S D+L TL++E TP++ +Y LI ++++ + A + F
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNED-DCTPNVVSYNTLIDGFSKAARVNDAYQLFL 387
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG---------VLPNTKSYN 205
M+ P +VT+ +R + +++ H +LP Y+
Sbjct: 388 EMVTAGQHPD----------VVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G++ A T+F+ M G P++ Y L+ GLC+ ++ A +++M +
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER 497
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-------CN--------------- 303
G PD ++Y TL+ LCR + EA L R +G CN
Sbjct: 498 GCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRV 557
Query: 304 ----------PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
P Y TV+ C+E +A ++LEDM G P+ + LVG +C
Sbjct: 558 LRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCR 617
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA-PHED 412
Q VA +++ M+ G P L+ GK EA VL L+ P E
Sbjct: 618 QDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDEL 677
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEI 437
+V ++ +++E+ VL E+
Sbjct: 678 WYVGLIAAYSNQDQVEEARNVLQEL 702
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 65/322 (20%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV-------- 236
A+ LFK ++P++ +Y I++R C G + +A +L+ +M +RG+ P V
Sbjct: 109 AYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLN 168
Query: 237 ------------------------ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
++ IL+ GL R +V+ A E+M + +P+
Sbjct: 169 ALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTA-IPNNW 227
Query: 273 SYTTLLNSL-------------------------------CRKKKLREAYKLLCRMKVKG 301
+YT ++N L C+ + +AY LL MK KG
Sbjct: 228 TYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKG 287
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D + YNT++ G CR A ++LE+M SN +P++ +Y L+ GLC A+
Sbjct: 288 YQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEAR 347
Query: 362 KYM-QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ L +P+ + LI GF +V++A + E++ AG+ P T+ ++
Sbjct: 348 DLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRG 407
Query: 421 ICAGEEMEKLGEVLNEIVKVEI 442
+C + L E+V +I
Sbjct: 408 LCNAGRASEAHSYLEEMVGKKI 429
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 152/353 (43%), Gaps = 21/353 (5%)
Query: 57 SPIGSPCRVQKLIASQS--DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
S I CR +L A+ + D ++A QPN NS L G K L
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGC------QPNLAVYNS------LIYGLCKTGRLC 485
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D L + +P TY LI + D A + LE + N ++
Sbjct: 486 DAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI 545
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L L A + + G P Y ++ + C +++ A L M G+
Sbjct: 546 ASL----RCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD + L+ +CR+ + A+ LE+M+ G P +Y+TLLN+L + K EA+
Sbjct: 602 KPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHV 661
Query: 293 LLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L R+ C PD + Y ++ + + + +A VL+++ S + ++V+Y TL+ GL
Sbjct: 662 VLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGL 721
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+ + ++ M F + + + LI+GFC +G+ D A VL E+ K
Sbjct: 722 FRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKK 774
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++A + R +L P ++E L N L A L + G+ P+ + +
Sbjct: 552 EQAQRVLRVVLATGNSPTAFFYATVIESLCKENN-LAEARQLLEDMIGAGIKPDGSTVDA 610
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NK 265
++ A C +A +M G P V +Y L+ L + + + A +L ++ +
Sbjct: 611 LVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHT 670
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD L Y L+ + + ++ EA +L +K K IV YNT++ G R
Sbjct: 671 SCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMV 730
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++L +M N + N ++ L+ G C G D A + + M K +P ++ L+
Sbjct: 731 YELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAIIKFLV 787
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 5/330 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFC 212
M E C P N +L+ L N + A +L G P+ SYN ++ F
Sbjct: 154 MTELGCIPDVFSYNNLLKGLC-DENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +RG++PDV +Y ++ LC+ +++A+++L M+ G +PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C + +EA L +M+ G P++V Y++++ C+ GR+ +A K+ + M
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +YRTL+ G +G + LM+ G P V + LI + KV
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
D+A V ++ + G P+ + ++ +C
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 163/333 (48%), Gaps = 5/333 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY +I ++ D+A++ +M++ P N IL + + A
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEA 290
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV PN +Y+ +M C NG + A +F+ M +RG+ PD+ +YR L+QG
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD + L+ + +++K+ +A + +M+ G NP+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y TV+ C+ G DA E M G PN++ Y +L+ GLC +D A++ +
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + + +++ G P T+ ++ C
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
+M++ ++L +V V +K D IV G + Y
Sbjct: 531 KMDEATKLLASMVSVGVKPD--IVTYGTLINGY 561
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 154/293 (52%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ ++ A K F SM + +P +L+ T + L
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT-KGALVEM 360
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ +NI++ A+ + A +F+KM + G+ P+V Y ++
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A+ E M+++G P+ + YT+L++ LC K +A +L+ M +G +
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ + M G P++++Y TL+ G C G D A K +
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P LI G+C V ++D+A + +E++ +G +P+ T+ +I+
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 165/330 (50%), Gaps = 25/330 (7%)
Query: 146 PDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRP-------------------- 184
PD A T+R++L+ + K +++ +L+L+V RN ++P
Sbjct: 339 PDIA--TYRTLLQGYATKGALVEMHALLDLMV--RNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F +HG+ PN Y ++ C +G + A F +M + G+ P++ Y L+
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + ++A +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ YNT++ G C G+ +A K+L M S G P++V+Y TL+ G C D A
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G SP+ + +++G + + A + + K+G T+ +I+ +C
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ + + +++ +TR IG
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIG 664
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 13/287 (4%)
Query: 168 LNRILELLVTHRNYLRPA-----FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
LNR L + H PA ++ A V P +Y I++ C G + + +
Sbjct: 58 LNRALADVARHS----PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFA 113
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSL 281
+ ++G D ++ L++GLC + + A+D+ L M G +PD SY LL L
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 282 CRKKKLREAYKLLCRM---KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C + + +EA +LL M + G PD+V YNTV+ GF +EG + A +M G L
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGIL 233
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++ LC D A + + M+ G P ++++ G+C+ G+ EA G
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L+++ G P+ T+ ++ +C + ++ + + K ++ D
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 161/356 (45%), Gaps = 7/356 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ FR T+ L+ L K S DI++ +E P +F+Y L+K + N
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE-LGCIPDVFSYNNLLKGLCDENR 178
Query: 146 PDRALKTFRSMLEFNCKPLPKQL---NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
AL+ M + P + N +L + + A+ + G+LP+
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK-AYSTYHEMLDRGILPDVV 237
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y+ ++ A C + A + N M + GVMPD +Y ++ G C Q A+ L+ M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ G P+ ++Y++L+N LC+ + EA K+ M +G PDI Y T++ G+ +G
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
++ +L+ M NG P+ + L+ Q D A M G +P+ +
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
I C G VD+A E+++ G P+ + ++ +C ++ +K E++ E++
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 155/352 (44%), Gaps = 3/352 (0%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEF 159
IL AK + +L+ K + + P++ Y +I + +S D A+ F M++
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE 440
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P ++ L T + + A +L G+ NT +N ++ + C G +
Sbjct: 441 GLTPNIIVYTSLIHGLCTCDKWDK-AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
+ LF+ M GV PD+ +Y L+ G C +++ A LL M++ G PD ++Y TL+N
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR ++ +A L M G +P+I+ YN ++ G R A ++ + +G
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
L +Y ++ GLC + D A + Q + + +I G++DEA +
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
G P T+ ++ + +E+L ++ + + D+R++ +
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYR 240
L F + K G + ++ +++ C + S A + +M E G +PDV SY
Sbjct: 108 LDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYN 167
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLN------------------ 279
L++GLC +++ A++LL M + G PD +SY T+LN
Sbjct: 168 NLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEM 227
Query: 280 -----------------SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+LC+ + + +A ++L M G PD + YN+++ G+C G+
Sbjct: 228 LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 287
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A L+ M S+G PN+V+Y +L+ LC G A+K M +G P + L
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
++G+ G + E +L+ +++ G P + ++ ICA + EK+ + +
Sbjct: 348 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL---ICAYAKQEKVDQAM 396
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR-- 183
V P + TY LI + D A K SM+ KP I+ Y R
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP------DIVTYGTLINGYCRVS 565
Query: 184 ---PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A LFK GV PN +YNI+++ + A L+ + + G ++ +Y
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ GLC+ + + A+ + +++ +T ++ ++ +L + ++ EA L
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+ Y+ + +G + + M NGC + ++V L +G A
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
Query: 361 KKYMQLMISKGFSPHFSVSHALIK 384
Y+ ++ K FS S + L++
Sbjct: 746 GTYLFMIDEKHFSLEASTASFLLE 769
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 1/245 (0%)
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
K F M+ KP N +++ + A L S GV P+ +Y ++
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCL-AGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+C + A LF +M GV P++ +Y I++QGL + A +L + G +
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 620
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+Y +L+ LC+ EA ++ + + + +N ++ + GR +A +
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 680
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+NG +P++ +Y + L +QG + M G S + +++++ G
Sbjct: 681 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Query: 391 KVDEA 395
+ A
Sbjct: 741 DITRA 745
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 7/371 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A ++FD + + F + TY ILI L +A+ L + +K +FTY
Sbjct: 96 AVQLFDEMTEKGLFGDAK-TYGILINGLCKARKTGLAIKLHEKMKGN---CKGDVFTYGM 151
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+I + + AL F M+ P + +++ L L+ A + FK
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF-GRLKEALEFFKEMEGR 210
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ + +YN ++ G N M +RG PD ++ IL+ GLC++ +V A
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+LE M +KG PD L+Y TL+N LC +L +A KL + +G ++ YN ++ G
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+C++ + +A ++ E+M G P+ V+Y TL+G LC G A+K M + G
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 390
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
S L+ G C G ++EA + + + K P+ + + +++ +C ++E+ + +
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 450
Query: 436 EIVKVEIKGDT 446
EI K ++ DT
Sbjct: 451 EISKNGLEPDT 461
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+F G+LP+ Y+ +M C G + A F +M RG+ DV +Y L+
Sbjct: 165 ALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIH 224
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL R L M+++GF PD ++T L++ LC++ K+ EA ++L M KG P
Sbjct: 225 GLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEP 284
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ YNT++ G C G+ DA K+ E + G N+ SY L+ G C D A +
Sbjct: 285 DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLF 344
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M KG P + LI C G+V A + E+ G+ T+ +++ +C
Sbjct: 345 EEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 404
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+E+ ++ I K E K + +
Sbjct: 405 GHLEEAIDLFQSIKKTEHKPNIEV 428
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H G P+ +YN +M C G + A LF + +RG+ +V SY IL+ G C+ ++
Sbjct: 278 HHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 337
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A L E+M KG P T++Y TL+ +LC+ ++R A KL M+ G + Y +
Sbjct: 338 DEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G +A + + + PN+ + L+ G+C G + A K + G
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + LI G CN G + EA +L ++ + G P T+ +I+ + E+ + +
Sbjct: 458 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517
Query: 433 VLNEI 437
+L E+
Sbjct: 518 LLEEM 522
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G P+ + +++ I A LF++M E+G+ D ++Y IL+ GLC+ +
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 254 RAVDLLEDMLNKGFVP-DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ L E M KG D +Y +++SLC+ EA + M G PD+V Y+++
Sbjct: 130 LAIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR GR +A + ++M G ++ +Y +L+ GL G++ ++ LM+ +GF
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP LI G C GKV EA +LE + G+ P T+ ++ +C ++E +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307
Query: 433 VLNEIVKVEIK 443
+ + IK
Sbjct: 308 LFESLADRGIK 318
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 131/262 (50%), Gaps = 1/262 (0%)
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
V N + A LF + G+ + K+Y I++ C +A L KM + D
Sbjct: 87 VWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGD 145
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y +++ LC+ A+D+ +M+ G +PD + Y++L++ LCR +L+EA +
Sbjct: 146 VFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 205
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M+ +G + D+ YN+++ G R G + L M G P+ ++ L+ GLC +G
Sbjct: 206 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 265
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A++ ++LM KG P + L+ G C VG++++A + E L G + ++
Sbjct: 266 KVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 325
Query: 416 MIVPQICAGEEMEKLGEVLNEI 437
+++ C +++++ + E+
Sbjct: 326 ILINGYCKDQKIDEAFRLFEEM 347
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 140/257 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A ++ K G+ PN +Y+ +M +C +++ A +F+ M RGV +V SY I
Sbjct: 151 VKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNI 210
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C+ + A++L E+M + +PD ++Y +L+N LC+ K+ A KL+ M +G
Sbjct: 211 MINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRG 270
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDI+ Y++++ C+ + A +L+++ G PN+ +Y L+ GLC G + A
Sbjct: 271 QPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 330
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ KG++ + +I GFCN G DEA +L ++ P+ T+ +I+ +
Sbjct: 331 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSL 390
Query: 422 CAGEEMEKLGEVLNEIV 438
+E +K +L E++
Sbjct: 391 FDNDENDKAENLLREMI 407
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A +F + GV N SYNIM+ FC A LF +M R ++PDV +Y
Sbjct: 184 NEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTY 243
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC+ +++ A+ L+++M ++G PD ++Y++LL++LC+ ++ +A LL +K
Sbjct: 244 NSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKD 303
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P++ Y ++ G C+ GR DA + ED+ G + +Y ++ G C++G+FD
Sbjct: 304 QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 363
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A + M P+ +I+ + + D+A +L E++ G
Sbjct: 364 ALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRG 410
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%)
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A + M ++G+ P+ +Y LM G C ++VN A + M +G + SY
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
++N C+ K EA L M + PD+V YN+++ G C+ G+ A K++++M
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P++++Y +L+ LC D A ++ + +G P+ LI G C G++++
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A + E+LL G +T+ +++ C
Sbjct: 329 AHNIFEDLLVKGYNITVNTYTVMIHGFC 356
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 96/191 (50%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ V A ++L M+ +G P+ ++Y++L++ C ++ A + M ++G ++
Sbjct: 147 NEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ GFC+ +A + E+M +P++V+Y +L+ GLC G A K + M
Sbjct: 207 SYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEM 266
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+G P +L+ C +VD+A +L+ L G P+ T+ +++ +C G +
Sbjct: 267 HDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRL 326
Query: 428 EKLGEVLNEIV 438
E + +++
Sbjct: 327 EDAHNIFEDLL 337
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNYLR 183
VT ++++Y I I + + + D A+ F E +C+ L + L+ + +
Sbjct: 201 VTANVWSYNIMINGFCKIKMTDEAMNLFE---EMHCRKLIPDVVTYNSLINGLCKSGKIS 257
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L H G P+ +Y+ ++ A C N + A L + ++G+ P++ +Y IL+
Sbjct: 258 YALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILI 317
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ ++ A ++ ED+L KG+ +YT +++ C K EA LL +MK C
Sbjct: 318 DGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCF 377
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
P+ + Y ++ A +L +M + G L
Sbjct: 378 PNALTYEIIIRSLFDNDENDKAENLLREMITRGLL 412
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 129/262 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L GV PN Y ++ C G +S A T+ M V+ D Y
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C K + A ++M KG D ++YTTL+N LCR +L+EA K+L M +
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D V Y +V G+C+ G+ +A +V M G PN+V+Y L GLC QG A
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M +KG + ++LI G C G +D+A + ++ AG P T+ ++ +
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C E+++ ++L E++ IK
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIK 571
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y +++ +C G ++ A+ + N M +RGV P+V +Y L GLC++ V A +LL +M
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
NKG + +Y +L+N LC+ L +A + + M G PD+ Y T++ C+ G
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +L++M NG P +V+Y L+ G C G + KK ++ M+ K P+ + ++L
Sbjct: 556 DRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+K +C + + + + P+E+T+ +++ C M++ NE+++
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 3/315 (0%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I I+ L + A+K M+ +P ++ LL + + A
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCD-KGRVSDALT 350
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + H V+ + Y ++ FC GD+ A F++M +G+ D +Y L+ GLC
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLC 410
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A +L++ML + D ++YT L++ C++ K+ EA+++ M +G P++V
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y + G C++G A ++L +M + G N +Y +L+ GLC G D A + M M
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G P LI C G++D A +L+E+L G P T+ +++ C +
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590
Query: 428 EKLGEVLNEIVKVEI 442
E ++L +++ I
Sbjct: 591 EGGKKLLEWMLEKNI 605
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 16/287 (5%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP--NTKSYNIMMRA 210
R + ++ P P+ N +L L L A +LF+ LP N SYNI+++
Sbjct: 223 LRRVRQYGISPSPEACNAVLSRLP-----LDEAIELFQG------LPDKNVCSYNILLKV 271
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G + A LF++M PDV +Y IL+ G C ++ AV LL+DM+ +G P+
Sbjct: 272 LCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPN 328
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
YT+++ LC K ++ +A ++ M D Y TV+ GFC +G + A + +
Sbjct: 329 ATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFD 388
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G + V+Y TL+ GLC G A+K +Q M+++ L+ G+C G
Sbjct: 389 EMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRG 448
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
K+ EA V +++ G AP+ T+ + +C +++ E+L+E+
Sbjct: 449 KMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + AF + + + GV PN +Y + C GD+ A L ++M +G+ + +
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC+ +++A+ + DM G PD +YTTL+++LC+ +L A+ LL M
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P IV YN ++ GFC GR K+LE M PN +Y +L+ C
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ + M S+ P+ + + LIKG C + EA E+++ G
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 2/372 (0%)
Query: 71 SQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTP 130
++ D + A+ FD R+ TY LI L RA + +L + + V
Sbjct: 376 NKGDLVSARRWFDEMQRK-GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+T L+ Y + A + +M++ P + + L + ++ A +L
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGD-VQAANELLH 493
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ N +YN ++ C G + A M G+ PDV +Y L+ LC+
Sbjct: 494 EMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++RA DLL++ML+ G P ++Y L+N C ++ KLL M K +P+ YN
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ +C ++ + M S PN +Y L+ G C A+ + MI K
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
GF S ALI+ K EA + ++ K G D + + + +E
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEAT 733
Query: 431 GEVLNEIVKVEI 442
+ +E+V+ I
Sbjct: 734 LALCDELVEASI 745
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 186/418 (44%), Gaps = 56/418 (13%)
Query: 76 LLAKEIFDYASRQPNFRHSNSTYLILILK--LGRAKYFSLIDDILITLKSEH-------- 125
+LA + + +QP ++ T+++ I L RA+ + IL L ++
Sbjct: 33 VLALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFG 92
Query: 126 -----YPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
YP+ P++F LI++Y + A+ TF SML KP N I+ +V
Sbjct: 93 VLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVK 152
Query: 178 H-RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ R +L F FK V PN S+NI++ C G + A + M G +P +
Sbjct: 153 NCRAHLVWXF--FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
SY L+ C+K + A+ L+ M KG D +Y ++SLCR + + Y +L +
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ K P+ V YNT++ GF +EG+ A +V +M PNL++Y L+ G C G
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330
Query: 357 FDVAKKYMQLMISKGFSPH----------------FSV------------------SH-A 381
F+ A + + +M + P+ F V SH
Sbjct: 331 FEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTV 390
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I G C G +DEA +L E+ K G P T+ +++ C + K EV+++I +
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYR 448
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 121/256 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ + K + PN SYN ++ F G I +A +FN+M E + P++ +Y IL+
Sbjct: 264 GYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C A+ LL+ M P+ ++ TLLN L + K A +L R + +
Sbjct: 324 GYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL 383
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + + ++ G CR G +A ++L +M +G P+++++ L+ G C G + AK+ M
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVM 443
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ +GF P+ + LI C VG V E + G+ T +V +C
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCEN 503
Query: 425 EEMEKLGEVLNEIVKV 440
++ + E L+ I ++
Sbjct: 504 GKLVEAEEFLHHISRI 519
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 148/331 (44%), Gaps = 3/331 (0%)
Query: 118 LITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
L+ K + +TP+ +Y LI + + A + F M+E N P N ++
Sbjct: 266 LVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGY 325
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ N+ A L + V PN + ++ + +A + + +
Sbjct: 326 CINGNF-EEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLN 384
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
S+ +++ GLCR ++ A LL +M G PD ++++ L+N C+ L +A +++
Sbjct: 385 CISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMS 444
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++ +G P+ V ++T++ C+ G + K M NG + + +LV LC+ G
Sbjct: 445 KIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENG 504
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A++++ + G P+ +I G+ NVG A V ++++ G P T+
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYG 564
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ +C G+ + ++L ++ + + DT
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R+ F + TY LIL L L +L +E + F LI+ E N
Sbjct: 763 RRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDL 822
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+ + +M F L K + + ++ R + F K G +P +K Y
Sbjct: 823 DKVIDLTHNMEVFRV-SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
MM+ C GDI A+ L ++M G+ D + +++GL ++ A+ +L+ ML
Sbjct: 882 MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+P T ++TTL++ C+K +EA+ L M+ DIV YN ++ C G I A
Sbjct: 942 KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGL 351
E++ G LPN+ +YR LV +
Sbjct: 1002 DFYEEIKQKGLLPNMTTYRVLVSAI 1026
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 130/300 (43%), Gaps = 39/300 (13%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I YA A F M+ P P +L++L +N+ A L K
Sbjct: 528 FDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWE-ARKLLKKL 586
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS-- 250
H + +T SYN ++ +G++ A LF +M + ++PD +Y ++ GL R+
Sbjct: 587 HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL 646
Query: 251 ----------------------------------QVNRAVDLLEDMLNKGFVPDTLSYTT 276
Q A+ L ++M KG D ++ +
Sbjct: 647 VCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNS 706
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC-KVLEDMPSN 335
+ + R K+ A L+ + + K P++ +N ++ G+ R G+ I +C K+ M +
Sbjct: 707 ITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR-GQDIMSCFKLYNLMRRS 765
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G PN ++Y +L+ GLC+ GM ++ K +++ I++ + + LI+ C + +D+
Sbjct: 766 GFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKV 825
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L V+PN ++NI++ + DI + L+N M G P+ +Y L+
Sbjct: 720 ASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLIL 779
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + +L+ + + D L++ L+ C L + L M+V +
Sbjct: 780 GLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSL 839
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V R + + + +M G +P Y T++ +C G A K
Sbjct: 840 DKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLK 899
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++ G S + A+++G GK++EA +L+ +L+ + P T+ ++ C
Sbjct: 900 DQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKK 959
Query: 425 EEMEK 429
+ ++
Sbjct: 960 DNFKE 964
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 15/292 (5%)
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+K YA NL + F C L L L A + + G
Sbjct: 475 MKFYAAMNLNGQNAD------NFTCNSLVASL--------CENGKLVEAEEFLHHISRIG 520
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++PN+ +++ ++ + GD S A+++F+KM G P +Y L++ LC+ A
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL+ + DT+SY TL+ + + L EA +L M PD Y ++ G
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640
Query: 317 CREGRAIDACKVLEDMPSNGCLP-NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
REGR + A L + L N + Y + GL G A + M KG S
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++ G+ +GKV A ++ + P+ T+ +++ G+++
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDI 752
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 122/270 (45%), Gaps = 19/270 (7%)
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
KIY E +P+ + F +++ +CK + + E + + + +G
Sbjct: 445 KIYREGFVPNNVI--FSTLIYNSCK-----VGNVYE-----------GMKFYAAMNLNGQ 486
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ + N ++ + C NG + A + + G++P+ ++ ++ G + A
Sbjct: 487 NADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFS 546
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ + M++ G P +Y +LL LC+ + EA KLL ++ D + YNT+++
Sbjct: 547 VFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEIS 606
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM-QLMISKGFSPHF 376
+ G ++A ++ E+M N LP+ +Y ++ GL +G A ++ +LM + + +
Sbjct: 607 KSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNS 666
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAG 406
V I G G+ A + +E+ + G
Sbjct: 667 IVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ R+ V AV+ ML +GF P + ++ S+ + + + +M
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQML 167
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P++ +N ++ C +G+ A +L M NG +P +VSY TL+ C +G F
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M KG + I C + + VL+++ P+E ++ ++
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287
Query: 419 PQICAGEEMEKLGEVLNEIVKVEI 442
++ V NE++++ +
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNL 311
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 36/284 (12%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L+ + G PN +Y+ ++ C +G + + + D ++ +L++
Sbjct: 756 FKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRK 815
Query: 246 LCRKSQVNRAVDL-----------------------------------LEDMLNKGFVPD 270
C + +++ +DL + +ML KGF+P
Sbjct: 816 CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+ Y T++ +CR ++ A+KL +M G + D +V G G+ +A +L+
Sbjct: 876 SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M +P ++ TL+ C + F A LM + LI C G
Sbjct: 936 RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
V A EE+ + G P+ T+ ++V I + + GE++
Sbjct: 996 DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSR-GEIV 1038
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 187 DLFKSAHKHGVLP-------NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
D FK AH +L + +YN+++ A C NGD+ A + ++ ++G++P++ +Y
Sbjct: 960 DNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTY 1019
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
R+L+ + K V+R +L+D+ ++G V L
Sbjct: 1020 RVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYL 1052
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 175/372 (47%), Gaps = 19/372 (5%)
Query: 84 YASRQPNFRHSN----------------STYLILILKLGRAKYFSLIDDILITLKSEHYP 127
Y S N RHSN S Y I+ G + D +L +E
Sbjct: 217 YNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKE 276
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
PS+ F ++ Y + D A F ML+ P N ++ L + + A
Sbjct: 277 FQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGS-MGEA 335
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
DL HG+ P+ +YNI+ + F G I+ A+ + KM +G P++ +Y +L+ G
Sbjct: 336 LDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICG 395
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V A+ L ++M++ GF +S T LL SLC+ +++ A+KL C M+ G PD
Sbjct: 396 HCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPD 455
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y+T++ G C++G A + E M SN +PN + + ++ GLC++G A+ Y
Sbjct: 456 LITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFD 515
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+I+ S + + +I G+ G EA + ++L + G +P T+ ++ C
Sbjct: 516 YLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINR 575
Query: 426 EMEKLGEVLNEI 437
++ + +L+ I
Sbjct: 576 KLSQARRLLDTI 587
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+ +I Y + A+K ++ + E P N ++ +R L A L +
Sbjct: 528 LYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK-LSQARRLLDT 586
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
HG+ PN +Y +M +C G++ L ++M + + P +Y ++++GLC++ +
Sbjct: 587 IKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ + LLEDM G PD +SY T++ + C+ + +R+A++L +M + P V YN
Sbjct: 647 LQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNI 706
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ GFC G DA +L + + N +Y T++ C +G D A Y + M+ KG
Sbjct: 707 LINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG 766
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
F A+I C V EA +L G P +D + +++ +
Sbjct: 767 FEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEF 826
Query: 432 EVLNEIVK 439
E+L E++K
Sbjct: 827 ELLAEMIK 834
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 152/312 (48%), Gaps = 3/312 (0%)
Query: 129 TPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+L TY + I + + ALK ++ M+ + +L L R + AF
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ-VDVAF 441
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF +G+ P+ +Y+ ++ C G++ A L+ KM ++P+ + ++ GL
Sbjct: 442 KLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C K ++++A + ++ D + Y +++ ++ REA KL ++ KG +P I
Sbjct: 502 CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V +N+++ GFC + A ++L+ + +G PN V+Y TL+ C++G + +
Sbjct: 562 VTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE 621
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M +K P +IKG C K+ E+C +LE++ G P + ++ I+ C +
Sbjct: 622 MKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARD 681
Query: 427 MEKLGEVLNEIV 438
M K ++ ++++
Sbjct: 682 MRKAFQLYDKML 693
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
YNIM+ + G+ A L+ ++ E+G+ P + ++ LM G C ++++A LL+ +
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G P+ ++YTTL+N C + ++ +LL MK K P + Y V+ G C++ +
Sbjct: 589 LHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQ 648
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++C++LEDM + G P+ VSY T++ C A + M+ P + LI
Sbjct: 649 ESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILI 708
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFC G + +A +L L ++ + I+ CA +++K ++V+ +
Sbjct: 709 NGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFE 768
Query: 444 GDTRIVEAGIG 454
R A IG
Sbjct: 769 VSIRDYSAVIG 779
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++L +K++ T +T +IK + + + M P N I++
Sbjct: 617 ELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAF 676
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
R+ +R AF L+ H + P + +YNI++ FC GD+ A L + R V +
Sbjct: 677 CKARD-MRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLN 735
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y +++ C K V++AV M+ KGF Y+ ++ LC++ + EA C
Sbjct: 736 KYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFC 795
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
M G PD + ++ F + G ++L +M +G L
Sbjct: 796 MMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 36/290 (12%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L T+K +T L+ +Y E L+ M P +++ L
Sbjct: 583 LLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLC 642
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
L+ + L + G+ P+ SYN +++AFC D+ A+ L++KM + P
Sbjct: 643 KQWK-LQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTS 701
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y IL+ G C + A +LL + N+ + +YTT++ + C K + +A +
Sbjct: 702 VTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQ 761
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M KG I Y+ V +G LC + +
Sbjct: 762 MVEKGFEVSIRDYSAV-----------------------------------IGRLCKRCL 786
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
AK + +M+S G P + L+ F G ++ +L E++K+G
Sbjct: 787 VTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
++++ A+ + + A + KM + + +++Y L+ L R +++ D+
Sbjct: 182 WDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL-------RHSNIMWDVY 234
Query: 264 NKGFVPDT--LSYTT--LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
N+ V T YT+ +++ LCR+ + ++A + K P +V +NT++ +C+
Sbjct: 235 NEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKL 294
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G A M +G LP+ SY L+ GLC G A M + G P
Sbjct: 295 GFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTY 354
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ L KGF +G ++ A +++++L G P+ T+ +++ C +E+ ++ E++
Sbjct: 355 NILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMI 413
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 143/282 (50%), Gaps = 3/282 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FTY ++ ++ + A M++ C P N ++ L T N L A D
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG-NRLEEALD 285
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + GV P+ ++NI++ A C GD +A LF +M G PD +Y L+ LC
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +A+DLL+DM + G T++Y T+++ LC+K ++ EA ++ +M ++G + + +
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ G C++ + DA +++ M S G PN ++Y +++ C QG A ++ M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ GF LI G C G+ A VL + G P
Sbjct: 466 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 135/257 (52%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+++ A + + G P+ +YNI++ C NG + A + N+M +RG +PD+
Sbjct: 206 QNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDIT 265
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ L+ LC +++ A+DL + KG PD ++ L+N+LC+ A +L M
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K GC PD V YNT++ C G+ A +L+DM S GC + ++Y T++ GLC +
Sbjct: 326 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 385
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A++ M +G S + + LI G C K+D+A ++ +++ G P+ T+ I
Sbjct: 386 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 445
Query: 418 VPQICAGEEMEKLGEVL 434
+ C +++K ++L
Sbjct: 446 LTHYCKQGDIKKAADIL 462
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N L+P F G+ +T YN ++ + + +++++M RG+ PDV ++
Sbjct: 42 NQLQPLF---------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 92
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
LM+ LCR QV AV +LE+M ++G PD ++TTL+ + + A ++ RM
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
GC+ V N ++ G+C+ GR DA ++ ++G P+ ++Y T V GLC
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K M +M+ +G P + ++ C G+++EA G+L +++ G P T+ ++
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKG 444
+C G +E E L+ +V +KG
Sbjct: 273 ALCTGNRLE---EALDLARQVTVKG 294
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 168/343 (48%), Gaps = 3/343 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ L+ L RA +L + S + FT L++ + E + AL+ M
Sbjct: 91 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE C +N ++ + A + G P+ +YN + C N
Sbjct: 151 LEMGCSATKVTVNVLINGYC-KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDH 209
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A + + M + G PDV +Y I++ LC+ Q+ A +L M+++G +PD ++ T
Sbjct: 210 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ +LC +L EA L ++ VKG +PD+ +N ++ C+ G A ++ E+M ++G
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEA 395
C P+ V+Y TL+ LC G A ++ M S G P ++++ +I G C +++EA
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-CPRSTITYNTIIDGLCKKMRIEEA 388
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V +++ G + + T+ ++ +C ++++ E++N+++
Sbjct: 389 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 431
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 10/322 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYP-VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFN 160
KLGR ++D L ++ E P TY + +++ ALK M++
Sbjct: 171 KLGR------VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 224
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P N ++ L + L A + G LP+ ++N ++ A C + A
Sbjct: 225 HDPDVFTYNIVVNCLCKN-GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L ++ +GV PDV ++ IL+ LC+ + A+ L E+M N G PD ++Y TL+++
Sbjct: 284 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 343
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC KL +A LL M+ GC + YNT++ G C++ R +A +V + M G N
Sbjct: 344 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 403
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++ TL+ GLC D A + + MIS+G P+ ++++ +C G + +A +LE
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 463
Query: 401 ELLKAGEAPHEDTWVMIVPQIC 422
+ G T+ ++ +C
Sbjct: 464 TMTANGFEVDVVTYGTLINGLC 485
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP TY LI +AL + M C N I++ L + + A
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC-KKMRIEEAE 389
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++F G+ N ++N ++ C + I A+ L N+M G+ P+ +Y ++
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + +A D+LE M GF D ++Y TL+N LC+ + + A K+L M++KG P
Sbjct: 450 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 509
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ R DA + +M G P+ ++Y+ + GLC G A +M
Sbjct: 510 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 569
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVD 393
M+ KGF P FS L +G N+G D
Sbjct: 570 EMVDKGFIPEFSSFRMLAEGLLNLGMDD 597
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 3/304 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE--FNCKPLPKQLNRILELLVTH 178
++ E + V + + Y L D A+ + L+ F + N +L +LV
Sbjct: 8 MRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLV-E 66
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ ++ ++ G+ P+ ++N +M+A C + A + +M RGV PD +
Sbjct: 67 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETT 126
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ LMQG + + A+ + ML G ++ L+N C+ ++ +A + +
Sbjct: 127 FTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 186
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD + YNT V G C+ A KV++ M G P++ +Y +V LC G +
Sbjct: 187 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 246
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
AK + M+ +G P + + LI C +++EA + ++ G +P T+ +++
Sbjct: 247 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 306
Query: 419 PQIC 422
+C
Sbjct: 307 NALC 310
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN N TY ++ + DIL T+ + + V + LI ++
Sbjct: 436 QPN----NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 491
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
ALK R M +P PK N +L+ L RN +R A LF+ + G P+ +Y I+
Sbjct: 492 VALKVLRGMRIKGMRPTPKAYNPVLQSLF-RRNNIRDALSLFREMAEVGEPPDALTYKIV 550
Query: 208 MRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQGL 246
R C G I A+ +M ++G +P+ S+R+L +GL
Sbjct: 551 FRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 181/381 (47%), Gaps = 19/381 (4%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILK--LGRAKYFSLIDDILITLKS----------- 123
LA + ++ +QP + T+++ I L RA+ + IL L
Sbjct: 27 LALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGA 86
Query: 124 --EHYPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
YP+ PS+F LI++Y + AL+TFR M P N +L LV
Sbjct: 87 LMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKE 146
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + + FK V P+ ++NI++ C G + A L KM E G +P V +
Sbjct: 147 RK-VGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVT 205
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ C+K + A++L++ M +KG D +Y L++ LC+ + + Y LL +M+
Sbjct: 206 YNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMR 265
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ +P+ + YN+++ GF +EG+ A ++ ++M LPN V+Y L+ G C G F+
Sbjct: 266 KRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFE 325
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A +++M + G P+ AL+ G C K + + +LE + G + ++
Sbjct: 326 QALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMI 385
Query: 419 PQICAGEEMEKLGEVLNEIVK 439
+C + + ++L++++K
Sbjct: 386 DGLCRNGLLNESVKLLDKMLK 406
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 13/340 (3%)
Query: 110 YFSLIDDI----------LITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML 157
Y L+DD+ L+ K ++P+ TY +I + + A + F+ M
Sbjct: 241 YNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMS 300
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
N P N +++ H A + + G PN SY+ ++ C +
Sbjct: 301 MLNLLPNCVTYNALIDGH-CHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKF 359
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
++ ++ +M G++ +Y ++ GLCR +N +V LL+ ML G VPD ++++ L
Sbjct: 360 ELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVL 419
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N CR K++ +++C+M G P+ + Y T++ +C+ G ++A KV M G
Sbjct: 420 INGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY 479
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
N LV LC G VA+ + M G P+ +I G+ N G +A
Sbjct: 480 DANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFS 539
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +E++KAG P T+ ++ +C + ++ +L+++
Sbjct: 540 MFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 3/305 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I Y S +A F M++ P +L+ L + + A L
Sbjct: 521 FDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF-KEAKRLLDKL 579
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H +T +YN ++ +G ++ A LF++M +R V+PD +Y I+ GL R+ ++
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639
Query: 253 NRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ ++L KG V P+ + YTT ++ L R + + A M+ G D++ N
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNV 699
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G+ R G+ A + M S + P+L +Y L+ G + +M+
Sbjct: 700 ILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRT 759
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P H+LI GFC +D +L+++L G A + T+ M++ + C +E+ K
Sbjct: 760 GIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKA 819
Query: 431 GEVLN 435
+++N
Sbjct: 820 FDLVN 824
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 108/229 (47%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YNI++ + ++S L+N M G+ PD + L+ G C+ + ++ + L
Sbjct: 728 PSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKL 787
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ ML G D ++ L+ C ++ +A+ L+ M + PD+ +++++ R
Sbjct: 788 LKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR 847
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
++ +L +M GC+P+ Y LV +C G A K M + G S
Sbjct: 848 VSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVA 907
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
AL++G GKV+EA VL+ +L+ P T+ ++ C E +
Sbjct: 908 ESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESL 956
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF ++ + + G N N+++ + C +G + +A F+ M + G +P+ ++ ++
Sbjct: 467 AFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIIN 526
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G +A + ++M+ G P +Y LL +LCR K +EA +LL ++
Sbjct: 527 GYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAV 586
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V YNT+++ + G DA + ++M LP+ +Y + GL +G A +
Sbjct: 587 DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646
Query: 365 QLMISKG-FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ KG SP + + G G+ A E++ K G
Sbjct: 647 GNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNG 689
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
V F LI Y E++ +A M F+ P + I+ +L + + ++ +
Sbjct: 797 AVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVL-SRVSTVQESH 855
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G +P+ + Y ++ C G I A+ L ++M G+ + L++GL
Sbjct: 856 LLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGL 915
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ +V A +L+ ML K +P ++TTL++ CR + L EA KL M D+
Sbjct: 916 AKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDV 975
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ YN ++ G C +G A K+ +++ G PN+ +Y L+ +
Sbjct: 976 IAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AFDL + + P+ +++ ++ + ++ L ++M ERG +PD Y L+
Sbjct: 819 AFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVN 878
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+CR ++ A L ++M G ++ + L+ L + K+ EA +L M K P
Sbjct: 879 RMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIP 938
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
I + T++ FCR ++A K+ + M ++++Y L+ GLC G A K
Sbjct: 939 TIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998
Query: 365 QLMISKGFSPHFSVSHALI 383
+ + +G P+ + LI
Sbjct: 999 KEIKQRGLWPNMTTYCILI 1017
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L+ + G+ P+ + + ++ FC + + + L KM GV D ++ +L+
Sbjct: 751 NLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKY 810
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C +V +A DL+ M PD ++ ++++ L R ++E++ LL M +GC PD
Sbjct: 811 CETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDR 870
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y +V CR G A K+ ++M + G V+ LV GL G + AK +
Sbjct: 871 RQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDF 930
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M+ K P + L+ FC + EA
Sbjct: 931 MLRKSLIPTIATFTTLMHMFCRNESLVEA 959
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
NP + ++ ++ + REG DA + M G P++ + L+G L +
Sbjct: 97 NPSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + M+++ P S + LI C GK+ +A +L+++ ++G P T+ ++ C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDT 446
+ E+++++ I+ D
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADA 238
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 141/257 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A + + G++P+ SY ++ + C G++ A L +KM E G + +Y
Sbjct: 113 MRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNS 172
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC + +++ LL+ ++ KG VP+ +Y+ LL + +++ EA KLL + KG
Sbjct: 173 LVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKG 232
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YN ++ G C+EGR DA ++ ++PS G PN+VSY L+ LC++G ++ A
Sbjct: 233 GEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M SP + LI G+ + A VLEE+++A P ++ I+ +
Sbjct: 293 VLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHL 352
Query: 422 CAGEEMEKLGEVLNEIV 438
C +++ + + L++++
Sbjct: 353 CKDGKLDLVVKCLDQMM 369
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 126/234 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L ++G NT +YN ++R C +G+++ + L +++ ++G++P+ +Y L++
Sbjct: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A LL++++ KG P+ +SY LL LC++ + +A +L + KG +P
Sbjct: 211 AAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSP 270
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN ++ C EGR +A +L +M + P+ V+Y L+G L G + A + +
Sbjct: 271 NVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVL 330
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ MI F P S + +I C GK+D L++++ P+E T+ I
Sbjct: 331 EEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIA 384
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 133/262 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF + + G P+ ++ C + A + M G++PD SY
Sbjct: 78 LTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTF 137
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LCRK V A+ L++ M G+ +T++Y +L+ LC L ++ +LL R+ KG
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ Y+ ++ +E A +A K+L+++ + G PNLVSY L+ GLC +G + A
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + + SKGFSP+ + L++ CN G+ +EA +L E+ +P T+ +++ +
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSL 317
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
E EVL E+++ K
Sbjct: 318 ALHGRTEHALEVLEEMIRARFK 339
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 2/292 (0%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
S +T+L+ A++ M E+ N ++ L H N L + L
Sbjct: 133 SSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGN-LTQSLQLLD 191
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ G++PN +Y+ ++ A A L +++ +G P++ SY +L+ GLC++
Sbjct: 192 RLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEG 251
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A+ L ++ +KGF P+ +SY LL SLC + + EA LL M +P V YN
Sbjct: 252 RTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYN 311
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ GR A +VLE+M P SY ++ LC G D+ K + M+ +
Sbjct: 312 ILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYR 371
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P+ +A I C G V EA +++ L + ++ + +++ +C
Sbjct: 372 HCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLC 422
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 125/287 (43%), Gaps = 35/287 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ G PN SYNI++R+ C G A L +M P +Y IL+
Sbjct: 256 AIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIG 315
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L + A+++LE+M+ F P SY ++ LC+ KL K L +M + CNP
Sbjct: 316 SLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNP 375
Query: 305 DIVHYNT----------------------------------VVLGFCREGRAIDACKVLE 330
+ YN V+ CR+G A ++L
Sbjct: 376 NEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLY 435
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G P+ +Y +L+ GLC +GM + A + +M + P ++LI G C
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENNKPDTENYNSLILGCCKSR 494
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ D A V E ++ G P+E T+ ++V I +EM+ +VL E+
Sbjct: 495 RTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLREL 541
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 5/239 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS TY LI A + AL+ M+ KP N I+ L
Sbjct: 304 SPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVK 363
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + ++H PN +YN + C G + A+++ + + E Y+I++ L
Sbjct: 364 CLDQMMYRH-CNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSL 421
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CRK A LL +M GF PD+ +Y++L+ LC + L EA ++ M+ + PD
Sbjct: 422 CRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENNKPDT 480
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+YN+++LG C+ R A V E M G LPN +Y LV G+ + D+A K ++
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 539
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF L K+G P++ +Y+ ++R C G ++ A +F+ M E PD E+Y L+
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENNKPDTENYNSLI 487
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ + + A+D+ E M+ KG++P+ +YT L+ + +K++ A K+L ++++
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLR--- 544
Query: 304 PDIVHYNTV 312
D++ +T+
Sbjct: 545 -DVISQSTL 552
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNST--YLILILKLGRAK----YFSLIDDILITLK 122
IA+ + + +E F N +HS++ Y I+I L R F L+ ++
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEM----- 437
Query: 123 SEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR-ILELLVTHR 179
Y TP FTY LI+ + + A++ F S++E N KP + N IL + R
Sbjct: 438 -TKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF-SVMEENNKPDTENYNSLILGCCKSRR 495
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A D+F+ G LPN +Y I++ ++ +A + ++ R V+
Sbjct: 496 TDL--ALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLE 553
Query: 240 RILMQ 244
R++MQ
Sbjct: 554 RLVMQ 558
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 179/382 (46%), Gaps = 1/382 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDI 117
P S + +I + + L F +ASR+ R S ++ ++I L L
Sbjct: 56 PFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLR-SGESFGLVIDMLSEDNGCDLYWQT 114
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
L LKS V F LI YA+ L ++A+++F M EF+C+P N IL +++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMR 174
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ AF ++ K PN ++ I+M G S A +F+ M RG+ P+
Sbjct: 175 EDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ GLC++ A L +M G PD++++ LL+ C+ ++ EA++LL
Sbjct: 235 TYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ G + Y++++ G R R A ++ +M P+++ Y L+ GL G
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKI 354
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A K ++ M SKG +P +A+IK C G ++E + E+ + P T ++
Sbjct: 355 EDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 418 VPQICAGEEMEKLGEVLNEIVK 439
+ +C + K E+ EI K
Sbjct: 415 ICSMCRNGLVRKAEEIFLEIEK 436
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 13/256 (5%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A + + +ML+ N KP L IL ++ + A L +S G+ P+T YN +
Sbjct: 321 QAFELYANMLKRNIKP-DIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAV 379
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++A C G + +L +M E PD ++ IL+ +CR V +A ++ ++ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGC 439
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV--------KGCNPDIVHYNTVVLGFCRE 319
P ++ L++ LC+ +L+EA LL +M+V + + ++T+V +
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMV----QS 495
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + A K L G P++VSY L+ G C +G D A K + ++ KG SP
Sbjct: 496 GSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 380 HALIKGFCNVGKVDEA 395
+ LI G VG+ +EA
Sbjct: 556 NTLINGLHRVGREEEA 571
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR- 254
GV ++ + +++ A+ G A F +M E PDV +Y ++++ + R+
Sbjct: 122 GVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFML 181
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A + +ML P+ ++ L++ L +K + +A K+ M +G +P+ V Y ++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ G DA K+ +M ++G P+ V++ L+ G C G A + ++L GF
Sbjct: 242 GLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+LI G + +A + +LK P + +++ + ++E ++L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 435 NEIVKVEIKGDTRIVEAGI 453
+ I DT A I
Sbjct: 362 RSMPSKGITPDTYCYNAVI 380
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
++ TF ++++ CK + R LL+ RPA + AH +S++ M+
Sbjct: 442 SVATFNALIDGLCKSGELKEAR---LLLHKMEVGRPASLFLRLAH-----SGNRSFDTMV 493
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
++ G I AY + G PD+ SY +L+ G CR+ ++ A+ LL + KG
Sbjct: 494 QS----GSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLS 549
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLL 294
PD+++Y TL+N L R + EA+KL
Sbjct: 550 PDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y I + C +G A +F+ + E+ ++ S L+ GLC++ Q++ A+D+ L
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTL 716
Query: 264 NKGF--VPDTLSYTTLLNSLCR-KKKLREAYKLLCRMKVKGCNPD 305
+ F +P +Y LL+SL + ++K+ +L RM+ G + D
Sbjct: 717 DNNFKLMPRVCNY--LLSSLLQSREKMEIVSQLTNRMERAGYDVD 759
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 155/304 (50%), Gaps = 11/304 (3%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY-----LRPAFDLFKSAHKHGVLPNT 201
D A+ +F M+ N +P +L + L + + Y L DLF AH N
Sbjct: 68 DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAH------ND 121
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ NI++ + C I A ++ +KMF+ G+ PD ++ L+ GLC + ++ AV+L +
Sbjct: 122 YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNE 181
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M + +P+T+++T L++ LC+K + EA + M KG P+I YN ++ G+C
Sbjct: 182 MAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLE 241
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA KV E M GC P++ SY L+ G C D AK + M K P+ +
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
L++G C+ + EA + +++ +G P+ T+ +++ +C +E+ ++L + + +
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361
Query: 442 IKGD 445
++ D
Sbjct: 362 LEPD 365
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 126/237 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +LF +PNT ++ I++ C G +S A +F M E+GV P++ +Y
Sbjct: 172 IKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNA 231
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C + ++N A + E M+ KG P SY+ L+N C+ +++ EA LL +M K
Sbjct: 232 LMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YNT++ G C ++A ++ + M S+G LPNL +Y L+ GLC G + A
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
K + M + P + + LI+G GK++ A + +L G P T+ +++
Sbjct: 352 KLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 199/468 (42%), Gaps = 27/468 (5%)
Query: 16 VTGAVTFPPKTPSLIFCY-----SSSSQESPSSPEQQQESSISNSKSPIG---------- 60
V + PP PS +F +S+ + PS P Q +SN+ + IG
Sbjct: 18 VEMGILLPPDFPSFLFSNHHHLNTSTCTKKPSLP-QNNGGFVSNNSNDIGIDDAMASFYR 76
Query: 61 --------SPCRVQKLIASQSDPLLAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKY 110
S + K + S + + ++ F H++ T ILI L R +
Sbjct: 77 MIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSH 136
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+L + FT LI A++ F M + P
Sbjct: 137 IHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTI 196
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++++L + + A +F++ + GV PN +YN +M +C +++ A +F M +
Sbjct: 197 LVDVLCK-KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGK 255
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G P V SY IL+ G C+ +++ A LL M K +P+T++Y TL+ LC L EA
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEA 315
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L +M G P++ Y+ ++ G C+ G +A K+L M P++V Y L+ G
Sbjct: 316 QELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQG 375
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+ G +VAK+ + + G P + +IKG G DEA + ++ G P
Sbjct: 376 MFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPD 435
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
++ +I+ ++ ++++E+V D+ + + LE +
Sbjct: 436 SCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESH 483
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 190/411 (46%), Gaps = 57/411 (13%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKL--------------------GRAKYFSLIDDILIT 120
FD+ S P F H+ +Y ++ L G+ S+ IL
Sbjct: 96 FFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASIL-- 153
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN-------CKPLPKQLNRILE 173
+++ + +F L+ +Y E A++ FR + N CK L +++ ++
Sbjct: 154 -ETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212
Query: 174 LLVTHRNYL---------------------------RPAFDLFKSAHKHGVLPNTKSYNI 206
+V YL + A +F K G+ P S+N
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNT 272
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ +C +G++ + L M E V PDV +Y L+ GLC++ Q+ A L ++M ++G
Sbjct: 273 LINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VP+ +++TTL+N C+ ++ A ++ +M KG D+V YNT++ G C+ G +A
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K + +M G +P+ +Y TL+ G C +G ++A + + M+ +G A+I G
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C GK+ +A L E+L+AG P + T+ M++ C +++ ++L E+
Sbjct: 453 CRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEM 503
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 183/392 (46%), Gaps = 13/392 (3%)
Query: 54 NSKSPI-GSPCRVQKLIASQSDPLLAKEIF--DYASRQPNFRHSNSTYLILILKLGRAKY 110
N K P G C ++++I S P++A E + S P ++ + + + K G+ K
Sbjct: 192 NLKIPFNGCKCLLERMI-KMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKD 250
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
LI D ++ T F LI Y +S + + M EF P +
Sbjct: 251 AQLIFD---EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSA 307
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ L L A LFK G++PN ++ ++ C NG + +A ++ +MF +
Sbjct: 308 LIDGLCKECQ-LEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTK 366
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ D+ Y L+ GLC+ A + +M +G +PD +YTTLL+ C++ L A
Sbjct: 367 GLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELA 426
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++ M +G D V + ++ G CR+G+ +DA + L +M G P+ +Y ++ G
Sbjct: 427 LEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDG 486
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
C +G + K ++ M S G P + L+ G C G+V A +L +L G P
Sbjct: 487 FCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPD 546
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ T+ +++ C + KLG+ N VK E+
Sbjct: 547 DITYNILLQGHC---KHGKLGDFQN--VKTEM 573
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 155/323 (47%), Gaps = 7/323 (2%)
Query: 126 YPVTPSLFTYLI---KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
YP P+++T+ + ++ E + D L F + + +P N ++ N L
Sbjct: 228 YP--PNVYTFNVLMNRLCKEGKVKDAQL-IFDEIRKTGLQPTAVSFNTLINGYCKSGN-L 283
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
F L + V P+ +Y+ ++ C + A LF +M +RG++P+ ++ L
Sbjct: 284 EEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTL 343
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ +V+ A+++ + M KG D + Y TL++ LC+ REA K + M +G
Sbjct: 344 INGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGL 403
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD Y T++ G C+EG A ++ ++M G + V++ ++ GLC G A++
Sbjct: 404 IPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAER 463
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M+ G P ++ GFC G V +L+E+ G P T+ +++ +C
Sbjct: 464 TLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLC 523
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
+++ +LN ++ + + D
Sbjct: 524 KQGQVKNADMLLNAMLNLGVVPD 546
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 175/345 (50%), Gaps = 7/345 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
L F +A++QP + HS Y ++ L + + F + ++ ++ E+ + P LF
Sbjct: 129 LGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVV 188
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A +++ +A++ M +F +P +L+ L H + ++ A LF+
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGS-VKDAAKLFEDMRMR 247
Query: 196 GVLP-NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
P N + + ++ +C G + A + +M E G PD+ Y L+ G ++
Sbjct: 248 --FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A DLL DM +GF P+ YT L+ +LC+ ++ EA K+ M+ C D+V Y +V
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 315 GFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC+ G+ ID C VL+DM G +P+ ++Y ++ + F+ + M+ M +
Sbjct: 366 GFCKWGK-IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + + +I+ C +G+V EA + E+ + G +P DT+V+++
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++++ F + A + ++M + G PD + L+ LC+ V A L EDM
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 264 NKGFVPDTLSY-TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ P L Y T+LL CR K+ EA +L +M G PDIV Y ++ G+ G+
Sbjct: 246 MR--FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA +L DM G PN Y L+ LC + A K M AL
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ GFC GK+D+ VL++++K G P E T++ I+ E E+ E++ ++ ++E
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 443 KGDTRIVEAGIGL 455
D I I L
Sbjct: 424 HPDIGIYNVVIRL 436
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL + + G PN Y ++++A C + A +F +M DV +Y L+
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++++ +L+DM+ KG +P L+Y ++ + +K+ E +L+ +M+ +P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI YN V+ C+ G +A ++ +M NG P + ++ ++ GL QG A +
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 365 QLMISKGFSPHFSVSH 380
+ M+++G FSVS
Sbjct: 486 KEMVTRGL---FSVSQ 498
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS---YTTLLNSLCRKKKLREAYK 292
+E Y+ +++ L + Q L+E+M + P + + L+ +++A +
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKEN--PQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP-NLVSYRTLVGGL 351
+L M G PD + ++ C+ G DA K+ EDM P NL + +L+ G
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGW 262
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G AK + M GF P L+ G+ N GK+ +A +L ++ + G P+
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ + +++ +C + ME+ +V E+ + E + D
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 142/257 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A + + G++P+ SY ++ + C G++ A L +KM E G + +Y
Sbjct: 113 MRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNS 172
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC + +++ LL+ ++ KG VP+ +Y+ LL + +++ EA KLL + KG
Sbjct: 173 LVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKG 232
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YN ++ G C+EGR DA ++ ++PS G PN+VSY L+ LC++G ++ A
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M SP + LI G+ + A VLEE+++A P ++ I+ ++
Sbjct: 293 VLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352
Query: 422 CAGEEMEKLGEVLNEIV 438
C +++ + + L++++
Sbjct: 353 CKDRKVDLVVKCLDQMM 369
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 125/234 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L ++G NT +YN ++R C +G+++ + L +++ ++G++P+ +Y L++
Sbjct: 151 AMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A LL++++ KG P+ +SY LL LC++ + +A +L + KG +P
Sbjct: 211 AAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSP 270
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN ++ C EGR +A +L +M + P+ V+Y L+G L G + A + +
Sbjct: 271 NVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVL 330
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ MI F P S + +I C KVD L++++ P+E T+ I
Sbjct: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIA 384
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF + + G P+ ++ C + A + M G++PD SY
Sbjct: 78 LNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTF 137
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LCRK V A+ L++ M G+ +T +Y +L+ LC L ++ +LL R+ KG
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ Y+ ++ +E A +A K+L+++ + G PNLVSY L+ GLC +G + A
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + + SKGFSP+ + L++ CN G+ +EA +L E+ +P T+ +++ +
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSL 317
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
E EVL E+++ K
Sbjct: 318 TLHGRTEHALEVLEEMIRARFK 339
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 2/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T+L+ A++ M E+ N ++ L H N L + L
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGN-LTQSLQLLDRL 193
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G++PN +Y+ ++ A A L +++ +G P++ SY +L+ GLC++ +
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ L ++ +KGF P+ +SY LL SLC + + EA LL M +P V YN +
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNIL 313
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GR A +VLE+M P SY ++ LC D+ K + M+ +
Sbjct: 314 IGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHC 373
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P+ +A I C G V EA +++ L ++ + +++ +C
Sbjct: 374 NPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLC 422
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 38/346 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ +TY L++ + D A K ++ KP N +L L A
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC-KEGRTEDA 256
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ G PN SYNI++R+ C G A L +M P +Y IL+
Sbjct: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + A+++LE+M+ F P SY ++ LC+ +K+ K L +M + CNP+
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376
Query: 306 IVHYNT----------------------------------VVLGFCREGRAIDACKVLED 331
YN V+ CR+G A ++L +
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 436
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G P+ +Y +L+ GLC +GM + A + +M + ++LI G C +
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRR 495
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
D A V E ++ G +E T+ ++V I +EM+ EVL E+
Sbjct: 496 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++N A LE M+ KG PD T LL LC+ K+R+A K++ M G PD
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +V CR+G A ++++ M G N +Y +LV GLC G + + + +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I KG P+ L++ DEA +L+E++ G P+ ++ +++ +C
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 428 EKLGEVLNEI 437
E ++ E+
Sbjct: 254 EDAMQLFREL 263
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF L K+G P++ +Y+ ++R C G ++ A +F+ M E + D E+Y L+
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLI 487
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ + + A+D+ E M+ KG++ + +YT L+ + +K++ A ++L ++++
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLR--- 544
Query: 304 PDIVHYNTV 312
D+++ +TV
Sbjct: 545 -DVINQSTV 552
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L+ ++ +L +A+ L M KG PD+ ++ C+ + A KV+E M +G
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P+ SY LV LC +G A + + M G+ + + ++L++G C G + ++
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+L+ L++ G P+ T+ ++ ++ ++L+EI+
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+E R DA LE M G P++ L+ LC A K M++MI G P +
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ C G V A +++++ + G + T+ +V +C + + ++L+ +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 438 VK 439
++
Sbjct: 194 IQ 195
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 142/257 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A + + G++P+ SY ++ + C G++ A L +KM E G + +Y
Sbjct: 113 MRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNS 172
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC + +++ LL+ ++ KG VP+ +Y+ LL + +++ EA KLL + KG
Sbjct: 173 LVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKG 232
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YN ++ G C+EGR DA ++ ++PS G PN+VSY L+ LC++G ++ A
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M SP + LI G+ + A VLEE+++A P ++ I+ ++
Sbjct: 293 VLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352
Query: 422 CAGEEMEKLGEVLNEIV 438
C +++ + + L++++
Sbjct: 353 CKDRKVDLVVKCLDQMM 369
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 125/234 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L ++G NT +YN ++R C +G+++ + L +++ ++G++P+ +Y L++
Sbjct: 151 AMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A LL++++ KG P+ +SY LL LC++ + +A +L + KG +P
Sbjct: 211 AAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSP 270
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN ++ C EGR +A +L +M + P+ V+Y L+G L G + A + +
Sbjct: 271 NVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVL 330
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ MI F P S + +I C KVD L++++ P+E T+ I
Sbjct: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIA 384
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF + + G P+ ++ C + A + M G++PD SY
Sbjct: 78 LNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTF 137
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LCRK V A+ L++ M G+ +T +Y +L+ LC L ++ +LL R+ KG
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ Y+ ++ +E A +A K+L+++ + G PNLVSY L+ GLC +G + A
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + + SKGFSP+ + L++ CN G+ +EA +L E+ +P T+ +++ +
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSL 317
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
E EVL E+++ K
Sbjct: 318 TLHGRTEHALEVLEEMIRARFK 339
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 2/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T+L+ A++ M E+ N ++ L H N L + L
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGN-LTQSLQLLDRL 193
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G++PN +Y+ ++ A A L +++ +G P++ SY +L+ GLC++ +
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ L ++ +KGF P+ +SY LL SLC + + EA LL M +P V YN +
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNIL 313
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GR A +VLE+M P SY ++ LC D+ K + M+ +
Sbjct: 314 IGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHC 373
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P+ +A I C G V EA +++ L ++ + +++ +C
Sbjct: 374 NPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLC 422
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 38/346 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ +TY L++ + D A K ++ KP N +L L A
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC-KEGRTEDA 256
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ G PN SYNI++R+ C G A L +M P +Y IL+
Sbjct: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + A+++LE+M+ F P SY ++ LC+ +K+ K L +M + CNP+
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376
Query: 306 IVHYNT----------------------------------VVLGFCREGRAIDACKVLED 331
YN V+ CR+G A ++L +
Sbjct: 377 EGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYE 436
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G P+ +Y +L+ GLC +GM + A + +M + ++LI G C +
Sbjct: 437 MTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRR 495
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
D A V E ++ G +E T+ ++V I +EM+ EVL E+
Sbjct: 496 TDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++N A LE M+ KG PD T LL LC+ K+R+A K++ M G PD
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +V CR+G A ++++ M G N +Y +LV GLC G + + + +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I KG P+ L++ DEA +L+E++ G P+ ++ +++ +C
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 428 EKLGEVLNEI 437
E ++ E+
Sbjct: 254 EDAMQLFREL 263
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF L K+G P++ +Y+ ++R C G ++ A +F+ M E + D E+Y L+
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLI 487
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ + + A+D+ E M+ KG++ + +YT L+ + +K++ A ++L ++++
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLR--- 544
Query: 304 PDIVHYNTV 312
D+++ +TV
Sbjct: 545 -DVINQSTV 552
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
L+ ++ +L +A+ L M KG PD+ ++ C+ + A KV+E M +G
Sbjct: 69 LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+P+ SY LV LC +G A + + M G+ + + ++L++G C G + ++
Sbjct: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+L+ L++ G P+ T+ ++ ++ ++L+EI+
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+E R DA LE M G P++ L+ LC A K M++MI G P +
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ C G V A +++++ + G + T+ +V +C + + ++L+ +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 438 VK 439
++
Sbjct: 194 IQ 195
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 198/444 (44%), Gaps = 58/444 (13%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS--------LI----- 114
LI +QSD A F++ F S Y +++ LG + F LI
Sbjct: 111 LIRTQSDASSALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNV 170
Query: 115 -----DDILITLK--SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
DD+ L +E P +F LIK Y + + ++ L+TF +E + P
Sbjct: 171 NVVSYDDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVA 230
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N +L L + NY+ +++++ + G+ N ++NIM C GD KM
Sbjct: 231 CNCLLNGL-SKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKM 289
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
E G PD+ +Y IL+ G C+K ++ A L + M +G VP+ +SY+ L+N LC++ K+
Sbjct: 290 EEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKI 349
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRT 346
+EA++L +M +G +PD+V YNT++ G+C+EG + C+ +L +M G P+ V+ R
Sbjct: 350 KEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRI 409
Query: 347 LVGG-----------------------------------LCDQGMFDVAKKYMQLMISKG 371
+ G LC +G A+ ++ + G
Sbjct: 410 VFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDG 469
Query: 372 -FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
+ P S L + C+ V+EA + E+ K + T+ I+ +C + +
Sbjct: 470 DYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEA 529
Query: 431 GEVLNEIVKVEIKGDTRIVEAGIG 454
+L E+V + I D I A I
Sbjct: 530 ENLLEEMVSLGILPDLEIKRALIN 553
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF L+K GV+PN SY+ +M C G I A+ LFN+M +RG+ PDV SY
Sbjct: 314 LEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNT 373
Query: 242 LMQGLCR---KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
L+ G C+ K Q+ R+ LL +M+ G PD ++ + R+ KL A ++ ++
Sbjct: 374 LISGYCKEGGKMQMCRS--LLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQ 431
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLC----- 352
G Y+ +++ C+EGR A L + +G +P + +Y L LC
Sbjct: 432 RFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNV 491
Query: 353 DQGMF---DVAKKYMQL---------------------------MISKGFSPHFSVSHAL 382
++ + ++AKK M+L M+S G P + AL
Sbjct: 492 EEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRAL 551
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
I G+C VD+A +L+ K + +++ IV C + +L E+ +++VK+
Sbjct: 552 INGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKI 609
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
RI+ T L A ++ + G+ Y+ ++ A C G A + ++ +
Sbjct: 408 RIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQ 467
Query: 230 RG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G +P++ +Y L + LC + V A+ L +M K + +Y +++ LCR K+
Sbjct: 468 DGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTS 527
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA LL M G PD+ ++ G+C E A +L+ + + SY +V
Sbjct: 528 EAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIV 587
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
C+ G + ++ G+ P+ +I+G
Sbjct: 588 KVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGL 625
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 195/445 (43%), Gaps = 39/445 (8%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLI- 100
+ PE Q+ + I + + DP + E F +AS+Q N + + +
Sbjct: 11 TDPEWQESLETHFLDTEIPASDIACHMFDQIHDPEMGLEFFHWASKQSNCGNYLNEFSCS 70
Query: 101 -LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
L+ L R + FS ++ +L +KS+ T F+ +I ++A+ L DRAL+ +R+ ++
Sbjct: 71 SLLRLLARRRLFSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKI 130
Query: 160 N-CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+ C P N +L +LV H + ++G + N + IM++ C G +
Sbjct: 131 HHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNY-TVCIMVKGLCKEGKVE 189
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ L K + RG MP++ Y L+ G C+K RA L +++ KGF+P +Y ++
Sbjct: 190 DGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAII 249
Query: 279 NSLCRKKKLREAYKLL--------------------------CRMKV---------KGCN 303
N C+K K KLL CR++ GC+
Sbjct: 250 NGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCD 309
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+ YN ++ G C G A ++LE G LPN VSY L+ C QG + A
Sbjct: 310 PDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDL 369
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M +G P ALI G G+VD A V ++++ G P + + +++ +C
Sbjct: 370 LIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCK 429
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +L E++ + D I
Sbjct: 430 KGRLPAAKVLLAEMLDQNVAPDAFI 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 42/381 (11%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ F + TY +I + F ++D +L+ + V+ ++ +I +
Sbjct: 234 KMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCR 293
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHR---NYLRPAFDLFKSAHKHGVLPNTKS 203
A T M++ C P N +L+T + A L + A K G+LPN S
Sbjct: 294 IEAADTVGWMIKSGCDPDMATYN----ILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVS 349
Query: 204 YNIMMRAFC-----------------------------------FNGDISIAYTLFNKMF 228
Y ++ +C G++ +A T+ NKM
Sbjct: 350 YTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV 409
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E+GV+PD Y +LM GLC+K ++ A LL +ML++ PD TL++ R
Sbjct: 410 EKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFE 469
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA KL KG +P +V YN ++ G+C+ G DA + M P+ +Y T++
Sbjct: 470 EAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTII 529
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G A + LM+ P+ LI GFC G ++ A +++L
Sbjct: 530 DGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589
Query: 409 PHEDTWVMIVPQICAGEEMEK 429
P+ T+ +++ C G + K
Sbjct: 590 PNVVTYTILIGCFCKGVNLTK 610
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 1/282 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y + RAL M E KP ++ L+ + A +
Sbjct: 350 YTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIV-AGEVDVALTVRNKM 408
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ GVLP+ YN++M C G + A L +M ++ V PD L+ G R
Sbjct: 409 VEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDF 468
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L E + KG P + Y ++ C+ +++A RM +PD Y+T+
Sbjct: 469 EEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTI 528
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ + A ++ M C PN+V+Y L+ G C G + A+K + M+S
Sbjct: 529 IDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRL 588
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P+ LI FC + +AC E++L P++ T+
Sbjct: 589 KPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTY 630
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 13/279 (4%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
ML+ N P +++ + H ++ A LF+ + G+ P YN M++ +C G
Sbjct: 443 MLDQNVAPDAFITATLVDGFIRHGDF-EEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFG 501
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A F +M + PD +Y ++ G + + ++ A+ + M+ P+ ++YT
Sbjct: 502 MMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYT 561
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L+N C + A K +M P++V Y ++ FC+ AC E M
Sbjct: 562 LLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLME 621
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ------------LMISKGFSPHFSVSHALI 383
CLPN V+Y L+ GL + F ++ + + +MIS G+ + ++++
Sbjct: 622 KCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSIL 681
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
C V A + ++++ G P + V ++ +C
Sbjct: 682 ICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLC 720
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 50/251 (19%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + Y +IK Y + + AL F+ M++ P + I++ + N L A
Sbjct: 483 IDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIK-MNDLHGA 541
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F K PN +Y +++ FC +GDI+ A F +M + P+V +Y IL+
Sbjct: 542 LRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGC 601
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL------------------------ 281
C+ + +A E ML + +P+ ++Y L+N L
Sbjct: 602 FCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLES 661
Query: 282 -----------------------CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
C+ K ++ A L +M KG PD V ++ G C
Sbjct: 662 FGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCL 721
Query: 319 EGRAIDACKVL 329
EGR+ D V+
Sbjct: 722 EGRSQDWNNVI 732
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL----- 182
P++ TY LI + + +A F ML C P N ++ L + +++
Sbjct: 590 PNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQR 649
Query: 183 ------RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ F G SYN ++ C + + A L +KM +G +PD
Sbjct: 650 SEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDP 709
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
S L+ GLC + + +++ LN+ + + Y+ L++ + + EA +L
Sbjct: 710 VSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLIL 767
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 171/350 (48%), Gaps = 13/350 (3%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDD---ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
H+ + ++ + +GR I+D I I +K + P+++TY I + + A
Sbjct: 334 HTFTAPIVALCDMGR------IEDAWKIFIDMKKKG--CKPNVYTYTSLISGQ-RVSRMA 384
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ F M P N ++ +L+ + + A +F KHG LPNT SYN ++R
Sbjct: 385 IGLFHRMSRDGVVPNTVTYNALMNVLMENME-IDSALIVFNMMGKHGCLPNTSSYNELIR 443
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
+C GD A ++ M + P + +Y I+++G C + A+ +LE M G P
Sbjct: 444 GYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQP 503
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D SYT L++ C+ K+ A + M +G P+ V Y ++ G+C++ + A ++L
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
E M +GC PN+ +Y L+ GL Q F A++ ++M+ + SP +I G CN
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNN 623
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G + A + +++K G P+ T+ ++ + +E+ E+ +E+ K
Sbjct: 624 GAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKK 673
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 158/315 (50%), Gaps = 9/315 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+ TY L+ + E+ D AL F M + C P N ++ T + + A
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEK-A 454
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + K P +YNI+++ +C +GD +A + M G PD SY L+ G
Sbjct: 455 MSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISG 514
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ S++ A + +M+++G P+ ++YT L++ C+ +KL A ++L RMK GC P+
Sbjct: 515 FCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPN 574
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ G ++ A ++ + M P++V+Y T++ GLC+ G +A +
Sbjct: 575 VQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFN 634
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC--- 422
M+ G P+ +LI+ G+V+EA + EL K G P E T+V ++ ++C
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI-EVCVMS 693
Query: 423 --AGEEMEKLGEVLN 435
+ LGE++N
Sbjct: 694 GKVDRAFDFLGEMIN 708
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 143/327 (43%), Gaps = 43/327 (13%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY +I Y + D A + F M E C+P + ++ L + + A D
Sbjct: 261 PDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC-NSGRVNEALD 319
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+HGVLP ++ + A C G I A+ +F M ++G P+V +Y L+ G
Sbjct: 320 FISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-- 377
Query: 248 RKSQVNR-AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC---- 302
+V+R A+ L M G VP+T++Y L+N L ++ A + M GC
Sbjct: 378 --QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435
Query: 303 -------------------------------NPDIVHYNTVVLGFCREGRAIDACKVLED 331
P +V YN ++ G+C G A +VLE
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M +NGC P+ SY L+ G C ++A M+ +G P+ ALI G+C K
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIV 418
+D A +LE + ++G P+ T+ +++
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLI 582
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 40/288 (13%)
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
QLN++ N D + + G+ PN YN ++ A C +G++ A ++ NK
Sbjct: 202 QLNKL--------NMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINK 253
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+F+ G+ PD +Y ++ G CR ++ A ++ M +G P+ +Y+TL+N LC +
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGR 313
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA + M G P + + ++ C GR DA K+ DM GC PN+ +Y +
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373
Query: 347 LVGG--------------------------------LCDQGMFDVAKKYMQLMISKGFSP 374
L+ G L + D A +M G P
Sbjct: 374 LISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLP 433
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ S + LI+G+C +G ++A +L +LK P T+ +I+ C
Sbjct: 434 NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYC 481
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 3/262 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP+L TY +IK Y +S D A++ M C+P ++ + + A
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC-KISKMELAS 525
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F G+ PN +Y ++ +C + + A + +M G P+V++Y +L+ GL
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ + A +L + ML + PD ++Y+T++N LC + A ++ +M GC P++
Sbjct: 586 TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNL 645
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y++++ +EGR +A ++ ++ G +P+ V+Y ++ G D A ++
Sbjct: 646 HTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGE 705
Query: 367 MISKGFSPHFSVSHALIKGFCN 388
MI+ G P LIKG N
Sbjct: 706 MINAGCQPTLQTYDVLIKGLQN 727
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 106/212 (50%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+++ +++ A + +RG + +Y L+ L + + + +D +L +G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P+ L Y +++N+LC+ +R+A ++ ++ G PD Y +++LG+CR A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ M GC PN +Y TL+ GLC+ G + A ++ M G P A I
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
C++G++++A + ++ K G P+ T+ ++
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 16/283 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y + D A + M C+P + N ++ L T +N A +L K
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVM 601
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ + P+ +Y+ ++ C NG I +A +FNKM + G +P++ +Y L+Q L ++ +V
Sbjct: 602 LEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRV 661
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A ++ ++ +G +PD ++Y ++ K+ A+ L M GC P + Y+ +
Sbjct: 662 EEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVL 721
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV-AKKYMQLMISKG 371
+ G E V + + LPN S T + ++ + V + K +L
Sbjct: 722 IKGLQNE-------MVYHKLVA---LPNAASTSTFDDQIINKDVISVLSSKLAEL----D 767
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
F + AL+ G+ EA + ++ + P++DT+
Sbjct: 768 FELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTY 810
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 106/281 (37%), Gaps = 54/281 (19%)
Query: 77 LAKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
LA E+F+ + PN TY LI LG+ +++ LK + + P
Sbjct: 628 LALEMFNKMVKHGCLPNLH----TYSSLIQALGQEGRVEEAEEMFSELKKQG--LIPDEV 681
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY +I++ S DRA M+ C+P + + +++ L Y
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY---------- 731
Query: 192 AHKHGVLPNTKS--------------------------------YNIMMRAFCFNGDISI 219
HK LPN S Y+ ++ +G
Sbjct: 732 -HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFE 790
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L+ M + P+ ++Y+ + L R +V+ A+D+ + M ++ Y L+
Sbjct: 791 ANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELIC 850
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+LC+ + +EA + +M + N D + + ++ G G
Sbjct: 851 TLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 149/295 (50%), Gaps = 3/295 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + P +TY L+ + A F SM+ KP ++ T + L
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT-KGALS 360
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
DL ++G+ P+ +NI+ A+ I A +FNKM ++G+ PDV ++ L+
Sbjct: 361 EMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ AV M+N+G P+ + +L+ LC K +A + M +G
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+V +NT++ C +G+ + A ++++ M G P+++SY TL+GG C G D A K
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKS 540
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +M+S G P + L+ G+C G++D+A GV E+L+ G P T+ I+
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 155/320 (48%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I ++ + DRA F+ M++ KP N ++ ++ + +
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW-KEV 292
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + HG+ P+ +Y ++ C NG A F+ M +G+ P+V Y IL+ G
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHG 352
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K ++ DLL M+ G PD + + + +K + EA + +MK +G +PD
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V++ ++ C+ GR DA M + G PN+ + +LV GLC ++ AK++
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+++G P + ++ C G+V +A +++ + + G P ++ ++ C
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+++ + L+ ++ V +K D
Sbjct: 533 RIDEAAKSLDVMLSVGLKPD 552
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 7/316 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP L TY LI + + TF +L+ + +N++L+ L + LR A
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKR-LREA 148
Query: 186 FD-LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---RGVMPDVESYRI 241
D L K + G P+ SYN +++ FC A L + M + R P+V SY
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G + QV++A +L +M+++G P+ ++YTT+++ LC+ + + A + +M KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD YN ++ G+ G+ + ++LE+M ++G P+ +Y +L+ LC+ G A+
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ MI KG P+ ++ LI G+ G + E +L +++ G +P + +I
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 422 CAGEEMEKLGEVLNEI 437
+++ + N++
Sbjct: 389 AKKAMIDEAMHIFNKM 404
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 2/325 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+ FD R+ + + + Y ILI S + D+L + +F +
Sbjct: 327 ARFFFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
YA+ + D A+ F M + P +++ L + A F GV
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK-LGRVDDAVLKFNQMMNEGV 444
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN +N ++ C A + +M +G+ PDV + ++ LC K QV +A
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L++ M G PD +SYTTL+ C ++ EA K L M G PD YNT++ G+C
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R GR DA V +M NG P +V+Y T++ GL F AK+ MI+ G +
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624
Query: 378 VSHALIKGFCNVGKVDEACGVLEEL 402
+ + ++ G VDEA + + L
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSL 649
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 157/364 (43%), Gaps = 7/364 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+ +R +N L+ L AK DILI E TP + +Y L+K +
Sbjct: 122 KSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPE-LGCTPDVVSYNTLLKGFCNEKR 180
Query: 146 PDRALKTFRSMLEF---NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ AL+ M + +C P ++ T + A++LF G+ PN
Sbjct: 181 AEEALELLHMMADSQGRSCPPNVVSYATVINGFFTE-GQVDKAYNLFLEMMDRGIQPNVV 239
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y ++ C + A +F +M ++GV PD ++Y L+ G + V +LE+M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G PD +Y +LLN LC + REA M KG P++ Y ++ G+ +G
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+ +L M NG P+ + + + M D A M +G SP AL
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I C +G+VD+A +++ G AP+ + +V +C ++ EK E E++ I
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479
Query: 443 KGDT 446
+ D
Sbjct: 480 RPDV 483
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 3/285 (1%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+++ LI YA M+E P N I+ + + A +F
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN-IIFTAYAKKAMIDEAMHIFN 402
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ G+ P+ ++ ++ A C G + A FN+M GV P++ + L+ GLC
Sbjct: 403 KMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD 462
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ +A + +MLN+G PD + + T+L +LC K ++ +A +L+ M+ G PD++ Y
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYT 522
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
T++ G C GR +A K L+ M S G P+ +Y TL+ G C G D A + M+
Sbjct: 523 TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
G +P ++ G + EA + ++ +G+ + W+
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK--QWNIWI 625
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 152/343 (44%), Gaps = 4/343 (1%)
Query: 112 SLIDDIL-ITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
++ID+ + I K + ++P + F LI + D A+ F M+ P
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ L T + A + + G+ P+ +N ++ C G + A L + M
Sbjct: 452 NSLVYGLCTVDKW-EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
G PDV SY L+ G C +++ A L+ ML+ G PD +Y TLL+ CR ++
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+AY + M G P +V Y+T++ G R +A ++ +M ++G N+ Y ++
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GL D A K Q + SK F + + +I G+ ++A + + G
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
P T+ +I + +E+ ++ + + K ++R++ A
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 4/271 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY-TLFNKMFERGVMPDVESYR 240
L F F K G N N +++ C + A L +M E G PDV SY
Sbjct: 110 LEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYN 169
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLN---KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
L++G C + + A++LL M + + P+ +SY T++N + ++ +AY L M
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEM 229
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G P++V Y TV+ G C+ A V + M G P+ +Y L+ G G +
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ ++ M + G P +L+ CN G+ EA + +++ G P+ + ++
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGIL 349
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ + ++ ++LN +V+ + D I
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHI 380
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 10/337 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSE-HYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFN 160
KLGR +DD ++ + V P++F + +Y + ++A + + ML
Sbjct: 425 KLGR------VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
+P N IL L T ++ A L + G P+ SY ++ C G I A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMK-AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ M G+ PD +Y L+ G CR +++ A + +ML G P ++Y+T+L+
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L ++ EA +L M G +I YN ++ G + +A K+ + + S
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ ++ ++G L G + A + S G P + + G ++E +
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ K+G P+ +V ++ ++ + G L+++
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKL 754
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ +YN ++ +C G I AY +F +M G+ P V +Y ++ GL + + A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M+ G + Y +LN L + + EA+KL + K +I +N ++
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ GR DA + + S G +P++ +Y + L ++G + M G +P+
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ +AL++ + G + A L +L + + T M++ + E
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDE 777
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP-----AFD 187
+T LI + D A K+ ML KP N +L Y R A+
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH------GYCRAGRIDDAYG 574
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F+ ++G+ P +Y+ ++ S A L+ M G ++ Y I++ GL
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + V+ A L + + +K F + ++ ++ +L + + +A L + G PD+
Sbjct: 635 KNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y + EG + + M +G PN LV L +G A Y+ +
Sbjct: 695 TYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKL 754
Query: 368 ISKGFSPHFSVSHALI 383
K FS S + LI
Sbjct: 755 DEKNFSLEASTTAMLI 770
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+L S+ + + + F +I +S + A+ F ++ + P I E L+
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLI-EE 706
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
YL DLF + K G PN++ N ++R GDI+ A +K+ E+ + +
Sbjct: 707 GYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTT 766
Query: 240 RILMQGLCRKSQVNRAVDLLE 260
+L+ L R + A L E
Sbjct: 767 AMLISLLSRDEYHHHATSLPE 787
>gi|225470179|ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Vitis vinifera]
Length = 514
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 163/338 (48%), Gaps = 9/338 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L + F ++ +Q N+RH+ + Y +++ + F + ++ + + +PVT F L
Sbjct: 171 LGYKFFMWSGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFPVTARTFQIL 230
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L RA++ F FN +P N IL L+ + Y L + ++
Sbjct: 231 ICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQY-----KLVEWVYQQM 285
Query: 197 VL----PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+L P+ +YNI+M G + + L ++ G PD ++ IL+ L + ++
Sbjct: 286 LLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKP 345
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+DLL M GF P L +TTL++ L R L M GC PD+V Y +
Sbjct: 346 LAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVM 405
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ G A + E+M G LPN+ +Y +++ GLC F+ A+ ++ M S+G
Sbjct: 406 ITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGC 465
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+P+F V + L+ N GK+ EA V+ ++ G+ H
Sbjct: 466 NPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVH 503
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 17/287 (5%)
Query: 66 QKLIASQSDPLLAKEIFDYASRQPNF-----RHSNSTYLILILKLGRAKYFSLIDDILIT 120
Q LI + + LA+ + + NF +HS + L +L L K + L++ +
Sbjct: 228 QILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCL---KQYKLVEWVYQQ 284
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE----FNCKPLPKQLNRILELLV 176
+ E Y +P + TY I + + L L F +LE P N +L LL
Sbjct: 285 MLLEDY--SPDILTYNIVMCTKYRLG--KLDQFHRLLEELGTNGFSPDFHTFNILLHLLG 340
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
L A DL + G P+ + ++ G++ F++M + G MPDV
Sbjct: 341 KGNKPL-AALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDV 399
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +++ G ++ A L E+M KG +P+ +Y +++ LC +K EA +L
Sbjct: 400 VCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKE 459
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
M+ +GCNP+ + YNT+V G+ +A +V+ M G +L+S
Sbjct: 460 MESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLS 506
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 33/337 (9%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ V PS +Y ++ + A ++ AL +R M+ + P + +
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAN 192
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L + +HG +P+ Y ++ A C G ++ A TL N+M G DV ++ ++
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR------- 296
+G+C +V A L++ M+ KG +P ++Y LL LCR ++ EA +L R
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 312
Query: 297 ------------------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
M +KGC PD Y+ ++ G C+ GR A ++L +M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN+V+Y ++ C GM+D + ++ M +KG + + + +I C G++
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
DEA G+++E+ G P ++ I+ +C E+ME+
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEE 469
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 127/241 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L+++ G P+ +Y+I+M C G IS A L +M ++G P+V +Y I
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTI 386
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C+ + LLE+M KG ++ Y ++ +LC+ ++ EA L+ M+ +G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CNPDI YNT++ C + +A + E++ G + N ++Y T++ L G + A
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI G S + LIK C G VD + +LEE+ + G P+ ++ +++ ++
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566
Query: 422 C 422
C
Sbjct: 567 C 567
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ N++ YN M+ A C +G + A L +M +G PD+ SY ++ LC
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
Q+ A + E++L +G V + ++Y T++++L R + ++A +L M + GC+ D+V
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C++G + +LE+M G PN VSY L+ LC + A + + M
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++G +P + LI G C +G + A +LE+L P T+ +++ C +
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 642
Query: 428 EKLGEVLNE-IVKVEIKGDTRIVE 450
+ +LN + V GD RI++
Sbjct: 643 DDAAMLLNRAMAAVCPVGDRRIMQ 666
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I++ + + +L + ++ + + +I + D A+ + M
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I+ L + + A +F++ + GV+ N +YN ++ A +G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQ-MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 501
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +M G DV SY L++ +C+ V+R++ LLE+M KG P+ +SY
Sbjct: 502 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 561
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ LC+++++R+A +L +M +G PDIV YNT++ G C+ G A +LE + +
Sbjct: 562 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 621
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVA 360
P++++Y L+ C + D A
Sbjct: 622 VHPDIITYNILISWHCKVRLLDDA 645
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 253 NRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYN 310
RA+ LL+ + + G P SY +L+ L R +A L RM + P +
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
CR GRA +A +L M +GC+P+ V Y+T++ LCDQG A + M+
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEE 426
G + + +++G C +G+V EA +++ ++ G P T+ ++ +C A E
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 427 MEKLGEV 433
LG V
Sbjct: 300 RAMLGRV 306
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LIK + DR+L M E KP N ++ L R +R A +L K
Sbjct: 524 YNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR-VRDALELSKQM 582
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ +YN ++ C G + A L K+ V PD+ +Y IL+ C+ +
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 642
Query: 253 NRAVDLL 259
+ A LL
Sbjct: 643 DDAAMLL 649
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 146/273 (53%), Gaps = 1/273 (0%)
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+ N+I+ LV ++Y A LFK G+ P+ + NI++ FC G ++ ++T+ K
Sbjct: 12 EFNKIVGSLVKMKHY-PTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGK 70
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ + G P+ + LM+GLC K +V +++ + ++ +GF D +SY TLLN LC+ +
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGE 130
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
R A KLL ++ + P++V YNT++ G C++ +A + +M + G PN+++Y T
Sbjct: 131 TRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYST 190
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C G A + MI K +P+ L+ C GKV EA +L + K G
Sbjct: 191 LIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG 250
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
P+ ++ ++ C E++ ++ + +V+
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 140/257 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +L K GV PN SYN +M +C G++ A +F+ M ++GV P+V SY I
Sbjct: 236 VKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNI 295
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ LC+ +V+ A++LL ++L+K VP+T++Y++L++ C+ ++ A LL M +G
Sbjct: 296 MIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D+V Y +++ C+ A + M G PN +Y L+ GLC G A+
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQ 415
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K Q ++ KG + + +I G C G +DEA + ++ + G P T+ +I+ +
Sbjct: 416 KLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475
Query: 422 CAGEEMEKLGEVLNEIV 438
++ +K ++L+E++
Sbjct: 476 FEKDQNDKAEKLLHEMI 492
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 130/247 (52%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + PN YN ++ C + ++ AY L+++M RG+ P+V +Y L
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q+ A LL +M+ K P+ +YT L+++LC++ K++EA LL M +G
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V YNT++ G+C G +A ++ M G PN+ SY ++ LC D A
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ ++ K P+ +LI GFC +G++ A +L+E+ G+ T+ ++ +C
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371
Query: 423 AGEEMEK 429
+ ++K
Sbjct: 372 KNQNLDK 378
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 156/318 (49%), Gaps = 21/318 (6%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K +HYP SLF ++ + PD F + NC H
Sbjct: 21 VKMKHYPTAISLFK---QMQVKGIEPD----LFTLNILINC--------------FCHLG 59
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ +F + K G PNT + N +M+ C G++ + +K+ +G D SY
Sbjct: 60 QMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYA 119
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GLC+ + A+ LL + ++ P+ + Y T+++ LC+ K + EAY L M +
Sbjct: 120 TLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+++ Y+T++ GFC G+ ++A +L +M PN+ +Y L+ LC +G A
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEA 239
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + +M +G P+ + L+ G+C +G+V A + +++ G P+ ++ +++ +
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDR 299
Query: 421 ICAGEEMEKLGEVLNEIV 438
+C + +++ +L E++
Sbjct: 300 LCKSKRVDEAMNLLREVL 317
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 140/276 (50%), Gaps = 1/276 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
ALK R + + + +P N I++ L + + A+DL+ G+ PN +Y+ ++
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDK-LVNEAYDLYSEMDARGIFPNVITYSTLI 192
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A+ L N+M + + P+V +Y ILM LC++ +V A +LL M +G
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ +SY TL++ C +++ A ++ M KG NP++ YN ++ C+ R +A +
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L ++ +PN V+Y +L+ G C G A ++ M +G +L+ C
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+D+A + ++ + G P++ T+ ++ +C G
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 3/247 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A +LF +M +G+ PD+ + IL+ C Q+ + +L +L G+ P+T++ TL+
Sbjct: 29 AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC K +++++ ++ +G D V Y T++ G C+ G A K+L + P
Sbjct: 89 GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V Y T++ GLC + + A M ++G P+ LI GFC G++ EA G+L
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY- 458
E++ P+ T+ +++ +C ++++ +L + K +K + +V ++ Y
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPN--VVSYNTLMDGYC 266
Query: 459 LIGKTRS 465
LIG+ ++
Sbjct: 267 LIGEVQN 273
>gi|302143887|emb|CBI22748.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 163/338 (48%), Gaps = 9/338 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L + F ++ +Q N+RH+ + Y +++ + F + ++ + + +PVT F L
Sbjct: 175 LGYKFFMWSGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFPVTARTFQIL 234
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L RA++ F FN +P N IL L+ + Y L + ++
Sbjct: 235 ICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQY-----KLVEWVYQQM 289
Query: 197 VL----PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+L P+ +YNI+M G + + L ++ G PD ++ IL+ L + ++
Sbjct: 290 LLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKP 349
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+DLL M GF P L +TTL++ L R L M GC PD+V Y +
Sbjct: 350 LAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVM 409
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ G A + E+M G LPN+ +Y +++ GLC F+ A+ ++ M S+G
Sbjct: 410 ITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGC 469
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+P+F V + L+ N GK+ EA V+ ++ G+ H
Sbjct: 470 NPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVH 507
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 17/287 (5%)
Query: 66 QKLIASQSDPLLAKEIFDYASRQPNF-----RHSNSTYLILILKLGRAKYFSLIDDILIT 120
Q LI + + LA+ + + NF +HS + L +L L K + L++ +
Sbjct: 232 QILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCL---KQYKLVEWVYQQ 288
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE----FNCKPLPKQLNRILELLV 176
+ E Y +P + TY I + + L L F +LE P N +L LL
Sbjct: 289 MLLEDY--SPDILTYNIVMCTKYRLG--KLDQFHRLLEELGTNGFSPDFHTFNILLHLLG 344
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
L A DL + G P+ + ++ G++ F++M + G MPDV
Sbjct: 345 KGNKPL-AALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDV 403
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +++ G ++ A L E+M KG +P+ +Y +++ LC +K EA +L
Sbjct: 404 VCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKE 463
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
M+ +GCNP+ + YNT+V G+ +A +V+ M G +L+S
Sbjct: 464 MESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLS 510
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 10/406 (2%)
Query: 41 PSSPEQQQESSISN-SKSPIGSPCRVQKLI-----ASQSDPLL-AKEIFDYASRQPNFRH 93
P++P S+ S SP+ SP V +I P A F++A+ +P F H
Sbjct: 82 PNTPSHSLSLDFSHFSTSPV-SPSLVSHVIEKCAAVRHGIPFFQALSFFNWATSRPGFTH 140
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
Y +I G+ + F L ++ +K+ + ++ F+ LI+ Y + L A+ F
Sbjct: 141 HPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAF 200
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M ++NCKP + ++ +L R A F S K P+ Y ++R +C
Sbjct: 201 NRMEDYNCKPDKIAFSILISILCRKRRATE-AQSFFDSL-KDKFEPDVIVYTNLVRGWCR 258
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G+I A +F +M G MP+V +Y I++ LCR Q+ RA D+ +ML+ G P++++
Sbjct: 259 AGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSIT 318
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ LL + + + ++ +MK GC PD V YN ++ C++G +A KVL M
Sbjct: 319 FNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMV 378
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC PN ++ L G + + A + M + + L++ F + D
Sbjct: 379 KKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTD 438
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +E+ + P+ +T+ +++ C + E+V+
Sbjct: 439 MVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVE 484
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 168/375 (44%), Gaps = 31/375 (8%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
I D+ R PNF N+ L L +FS PV+PSL +++I+
Sbjct: 69 IKDHHRRNPNFSLPNTPSHSLSLDFS---HFST------------SPVSPSLVSHVIEKC 113
Query: 141 AESNLPDRALKTFRSMLEFNC---KP----LPKQLNRILELLVTHRNYL--RPAFDLFKS 191
A + F+++ FN +P P+ N +++L RN+ DL K+
Sbjct: 114 AAVR---HGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKA 170
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
V + ++++I++R + G S A FN+M + PD ++ IL+ LCRK +
Sbjct: 171 ---RNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRR 227
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A + + +K F PD + YT L+ CR + EA ++ MKV GC P++ Y
Sbjct: 228 ATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTI 286
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
V+ CR G+ A V +M GC PN +++ L+ G + + M G
Sbjct: 287 VIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMG 346
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + LI+ C G +DEA VL ++K G +P+ T+ + I ++
Sbjct: 347 CPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAH 406
Query: 432 EVLNEIVKVEIKGDT 446
+ ++ +++ K +T
Sbjct: 407 RLYAKMKELKCKANT 421
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 140/314 (44%), Gaps = 5/314 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAES-NLPDRALKTFRS 155
+ ILI L R + + +LK + P ++T L++ + + N+P+ A + F
Sbjct: 214 AFSILISILCRKRRATEAQSFFDSLKDKFEPDV-IVYTNLVRGWCRAGNIPE-AERVFTE 271
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M C P +++ L R A D+F G PN+ ++N ++R G
Sbjct: 272 MKVAGCMPNVYTYTIVIDALCRCGQITR-AHDVFAEMLDVGCEPNSITFNNLLRVHVKAG 330
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++N+M G PD +Y L++ C+ ++ A+ +L M+ KG P+ ++
Sbjct: 331 RTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFN 390
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L S+ + + + A++L +MK C + V YN ++ F K+ ++M +
Sbjct: 391 GLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDED 450
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI-SKGFSPHFSVSHALIKGFCNVGKVDE 394
PN+ +Y L+ C G ++ A K+ + M+ K P V +++ G++ +
Sbjct: 451 DVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKK 510
Query: 395 ACGVLEELLKAGEA 408
++ ++ G A
Sbjct: 511 HEELVAVMVDRGFA 524
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 167/333 (50%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N+ H STY+ LI L +Y + I +++ VTP+ + +++
Sbjct: 1098 QFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVR 1157
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P+ + N ++ +++ H L+ G
Sbjct: 1158 MLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMI-IMLMHEGQYEKVHQLYNEMSTEGHC 1216
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M E G+ P + Y +L+ + + + A+
Sbjct: 1217 FPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALS 1276
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M ++ PD +YT L+ L + ++ EAY C M+ +GC PD V N ++
Sbjct: 1277 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLG 1336
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ ++M + C+P++V+Y T++ L + + + + M G SP
Sbjct: 1337 KAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS 1396
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC ++++A +LEE+ + G P
Sbjct: 1397 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 1429
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 157/341 (46%), Gaps = 9/341 (2%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P +FTY LI+ ++ D A F M C+P +N ++ L L
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL-GKAGRL 1341
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A LF+ +P+ +YN +++A F S + F +M E G+ P +Y I
Sbjct: 1342 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 1401
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +++ +A+ LLE+M KGF P +Y +L+++L + K+ A +L +K
Sbjct: 1402 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 1461
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y ++ + GR DA + ++M GC P++ +Y L+ GL GM D A
Sbjct: 1462 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 1521
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ M G P + + ++ G G A +L + ++ P ++ ++ +
Sbjct: 1522 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 1581
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD----TRIVEAGIGLEDY 458
E+ +++ E+ + + D + I+EA IG D+
Sbjct: 1582 SHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA-IGKVDH 1621
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 30 IFCYSSSSQESPSSPEQQQESSISNSKSP----IGSPCRVQKLIASQSDPLLAKEIFDYA 85
+F S + E PS E+ +ES IS S I C+ ++ + +L +E+
Sbjct: 1370 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAM---MLLEEM---- 1422
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+ F + Y LI LG+AK + L ++ LK + ++ +IK ++
Sbjct: 1423 -DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 1481
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ F M + C P N ++ L L A + +HG +P+ SYN
Sbjct: 1482 LDDAINMFDEMNKLGCAPDVYAYNALMSGLA-RTGMLDEALSTMRRMQEHGCIPDINSYN 1540
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ G A + + M + V PDV SY ++ L A L+++M
Sbjct: 1541 IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTL 1600
Query: 266 GFVPDTLSYTTLLNSLCR 283
GF D ++Y+++L ++ +
Sbjct: 1601 GFEYDLITYSSILEAIGK 1618
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 136/246 (55%), Gaps = 3/246 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ A C +I A L + +G++PDV ++ L+QGLC + A+++
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M NKG PD +Y+ L++SLC +++L+EA LL M+ GC + V YNT++ G C+
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R DA ++ + M G + V+Y TL+ GLC + A + M MI +G P
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++L+ FC VG +++A +++ + G P T+ ++ +C ++ ++L
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLR--- 567
Query: 439 KVEIKG 444
V++KG
Sbjct: 568 SVQMKG 573
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 128/241 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LRPA + + HG+ P+ ++ +M+ F GD++ A + +M G + S ++
Sbjct: 174 LRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKV 233
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ +V A+ + ++ +GF PD +++ +L+N CR + +A ++ M KG
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD+ YN+++ G C+ G A ++L+ M C PN V+Y TL+ LC + + A
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++++SKG P + LI+G C D A + EE+ G P E T+ +++ +
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413
Query: 422 C 422
C
Sbjct: 414 C 414
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 126/233 (54%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+T YNI + A + + + L +KM G++ DV ++ +L++ LC+ Q+ A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ +LE+M N G PD +++TTL+ + L A K+ +M GC V +V G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+EGR +A + + ++ G P+ V++ +LV G C G + A + MI KGF P
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
++LI G C +G+ ++A +L++++ +P+ T+ ++ +C E+E
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIE 350
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 178/376 (47%), Gaps = 40/376 (10%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ +LI L +A L IL+ + ++ + P FT L++ + E + ALK
Sbjct: 159 STFNVLIKALCKAH--QLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMK 216
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ ML + C L ++L + A + G P+ ++N ++ FC
Sbjct: 217 KQMLGYGCL-LTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCR 275
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G+++ A + + M E+G PDV +Y L+ G+C+ + +A+++L+ M+ + P+T++
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335
Query: 274 YTTLLNSLCRKKKLREAYKL----------------------LC-------------RMK 298
Y TL+++LC++ ++ A L LC MK
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KGC PD Y+ ++ C E R +A +L++M S+GC N V Y TL+ GLC +
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ M G S + LI G C +V+EA ++++++ G P + T+ ++
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Query: 419 PQICAGEEMEKLGEVL 434
C ++EK G+++
Sbjct: 516 TYFCRVGDIEKAGDIV 531
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 163/337 (48%), Gaps = 3/337 (0%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN 160
L+L+L ++ F I +L LKS + F LI+ + + + LK + L F
Sbjct: 61 LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGF- 119
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
KP N L LV N L+ L G++ + ++N++++A C + A
Sbjct: 120 -KPDTNFYNIALNALV-EDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ +M G+ PD ++ LMQG + +N A+ + + ML G + +S L+N
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C++ ++ EA + + + +G +PD V +N++V GFCR G DA +++ M G P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ +Y +L+ G+C G F+ A + +Q MI + SP+ + LI C +++ A +
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ G P T+ ++ +C + + E+ E+
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 144/285 (50%), Gaps = 5/285 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++TY LI + ++A++ + M+ C P N ++ L N + A D
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALC-KENEIEAATD 354
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+LP+ ++N +++ C + + IA +F +M +G PD +Y IL+ LC
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ A+ LL++M + G + + Y TL++ LC+ +++ +A ++ +M++ G + V
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G C+ R +A ++++ M G P+ +Y +L+ C G + A +Q M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG--EAPH 410
S G P LI G C G+VD A +L + G PH
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPH 579
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 4/284 (1%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
PLP N L L +T + L K G +PN ++ ++++F +I
Sbjct: 54 PLPP--NETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLK 111
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ E G PD Y I + L +++ L M+N+G V D ++ L+ +LC
Sbjct: 112 ILEN--ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALC 169
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+ +LR A +L M G PD + + T++ GF EG A K+ + M GCL V
Sbjct: 170 KAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV 229
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
S + LV G C +G + A +++ + +GFSP ++L+ GFC +G V++A +++ +
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ G P T+ ++ +C E EK E+L +++ E +T
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 2/344 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L + D+ L S+ F LI+ S D A++ F M
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
CKP + +++ L R L+ A L K G N YN ++ C +
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERR-LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A +F++M GV +Y L+ GLC+ +V A L++ M+ +G PD +Y +
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL CR + +A ++ M GC PDI Y T++ G CR GR A K+L + G
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK-VDEA 395
+ +Y ++ L + + + M+ K P + +G CN G + EA
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEA 633
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
E+L+ G P ++ + +C+ + L E++N +++
Sbjct: 634 IDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVME 677
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ P+ +YN ++ FC GDI A + M G PD+ +Y L+ GLCR +V+
Sbjct: 502 EGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDV 561
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A LL + KG V +Y ++ +L +K+ +E +L M K PD + + V
Sbjct: 562 ASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFR 621
Query: 315 GFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C G I +A +M G LP S+ L GLC M D + + +++ K
Sbjct: 622 GLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQM 681
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELL 403
S +I+GF + K ++A L +L
Sbjct: 682 SERETS--MIRGFLKIRKFNDALANLGGIL 709
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ R DI+ T+ S P +FTY LI + D A K R
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNG--CEPDIFTYGTLIGGLCRAGRVDVASKLLR 567
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
S+ P N +++ L R + LF+ + P+ ++ I+ R C
Sbjct: 568 SVQMKGIVLTPHAYNPVIQALFM-RKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNG 626
Query: 215 GD-ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G I A +M E+G++P+ S+ L +GLC S + ++L+ ++ K + +
Sbjct: 627 GGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE--R 684
Query: 274 YTTLLNSLCRKKKLREA 290
T+++ + +K +A
Sbjct: 685 ETSMIRGFLKIRKFNDA 701
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 144/259 (55%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N ++ A + + G++P+ SY ++ C G++ A L KM + G + +Y
Sbjct: 111 NKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTY 170
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L++GLC +N+++ L+ ++ KG VP+ +Y++LL + +++ + EA +LL +
Sbjct: 171 NTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIA 230
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P++V YN ++ G C+EGR +A ++ +++PS G PN+VSY L+ LC +G ++
Sbjct: 231 KGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEE 290
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M + SP + LI GK+++A V++E++ P ++ I+
Sbjct: 291 ANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIA 350
Query: 420 QICAGEEMEKLGEVLNEIV 438
++C ++E + L++++
Sbjct: 351 RLCKEGKVEAVVNCLDQMI 369
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 150/288 (52%), Gaps = 7/288 (2%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH---RNYLRPAFDLFK 190
T L+ +SN +A++ M+ +C +P + LV H R + A L +
Sbjct: 101 TQLLYDLCKSNKMKKAIRVMEMMI--SCGIIPDAASYTF--LVNHLCKRGNVGYAMQLVE 156
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G NT +YN +++ C +G+++ + +++ ++G++P+ +Y L++ ++
Sbjct: 157 KMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKER 216
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
VN A+ LL++++ KG P+ +SY LL LC++ ++ EA +L + KG +P++V YN
Sbjct: 217 GVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYN 276
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ C EGR +A ++L +M P++V+Y L+G L G + A + + M+
Sbjct: 277 ILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMG 336
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
F P + + +I C GKV+ L++++ +P+E T+ I
Sbjct: 337 PFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIA 384
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 136/251 (54%), Gaps = 4/251 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K+ HK V+ T+ ++ C + + A + M G++PD SY L+ LC
Sbjct: 88 IVKNGHKPDVVQATQ----LLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLC 143
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V A+ L+E M + G+ +T++Y TL+ LC L ++ + L R+ KG P+
Sbjct: 144 KRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAF 203
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ +E +A ++L+++ + G PNLVSY L+ GLC +G + A + + +
Sbjct: 204 TYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNL 263
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
SKGFSP+ + L++ C G+ +EA +L E+ +P T+ +++ + ++
Sbjct: 264 PSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKI 323
Query: 428 EKLGEVLNEIV 438
E+ +V++E++
Sbjct: 324 EQALQVIDEMM 334
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 152/347 (43%), Gaps = 39/347 (11%)
Query: 128 VTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P+ FTY L Y E + + A++ ++ +P N +L L +
Sbjct: 198 LVPNAFTYSSLLEAAYKERGV-NEAMRLLDEIIAKGGQPNLVSYNVLLTGLCK-EGRIEE 255
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK+ G PN SYNI++R+ C+ G A L +M R P + +Y IL+
Sbjct: 256 AIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIG 315
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L ++ +A+ ++++M+ F P SY ++ LC++ K+ L +M C+P
Sbjct: 316 SLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSP 375
Query: 305 D--------------------------------IVH--YNTVVLGFCREGRAIDACKVLE 330
+ +H Y VV C++G A +L
Sbjct: 376 NEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLY 435
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G P+ +Y +L+ GLC +GM A + +L+ + P +ALI GFC
Sbjct: 436 EMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSH 495
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ D + V E +++ G P E T+ ++V I EE E EVL E+
Sbjct: 496 RTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLREL 542
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%), Gaps = 6/243 (2%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFN--KMFERGVMPDVESYRILMQGLCRKSQVNR 254
LPN +S R N D+ I+ F+ + + G PDV L+ LC+ +++ +
Sbjct: 60 TLPNWRSGKNDQR----NRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKK 115
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ ++E M++ G +PD SYT L+N LC++ + A +L+ +M+ G + V YNT+V
Sbjct: 116 AIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVK 175
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C G + + L+ + G +PN +Y +L+ + + A + + +I+KG P
Sbjct: 176 GLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQP 235
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ + L+ G C G+++EA + + L G +P+ ++ +++ +C E+ E+L
Sbjct: 236 NLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELL 295
Query: 435 NEI 437
E+
Sbjct: 296 AEM 298
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%)
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
R ++ +A+ L + G PD+V ++ C+ + A +V+E M S G +P+
Sbjct: 74 RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
SY LV LC +G A + ++ M G+ + + L+KG C G ++++ L+ L
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++ G P+ T+ ++ + + +L+EI+
Sbjct: 194 MQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEII 229
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 64/117 (54%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF L K+G P++ +Y+ ++R C G + A +F + E PD++++ L+
Sbjct: 429 PAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALI 488
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
G C+ + + ++++ E M+ KG+ P +YT L+ + +++ A ++L + ++
Sbjct: 489 LGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLR 545
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R+ R DA LE + NG P++V L+ LC A + M++MIS G P +
Sbjct: 74 RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ C G V A ++E++ +G + T+ +V +C + K + L+ +
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193
Query: 438 VK 439
++
Sbjct: 194 MQ 195
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 40/389 (10%)
Query: 74 DPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
D L + FD+ SR Q + + Y L+ L R++ FS ++ +L ++ E T
Sbjct: 72 DVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREA 131
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLE--------FNCKPLPKQLNRILELLVTHRNY--- 181
+ +I+ Y++S L ++AL+ + +L+ C L L ++ + + + Y
Sbjct: 132 MSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEM 191
Query: 182 ----------------------------LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
L L + G +PN YN ++ +C
Sbjct: 192 LEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCK 251
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GD+ +A LF ++ +G +P VE+Y ++ G C+K LL +M ++G +
Sbjct: 252 KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 311
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y T++++ + + +A + + M GC PDIV YNT++ G CR+G+ +A ++LE
Sbjct: 312 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 371
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G +PN SY L+ C QG +D A ++ M +G P AL+ G G+VD
Sbjct: 372 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 431
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A + E++L+ G P + +++ +C
Sbjct: 432 VALTIREKMLERGVFPDAGIYNILMSGLC 460
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 156/361 (43%), Gaps = 36/361 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I + F ID +L+ + S V ++ +I + +A++T M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC---- 212
+E CKP N ++ + A L + A G++PN SY ++ A+C
Sbjct: 336 IECGCKPDIVTYNTLISG-SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394
Query: 213 -------------------------------FNGDISIAYTLFNKMFERGVMPDVESYRI 241
G++ +A T+ KM ERGV PD Y I
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM GLC+K ++ A LL +ML++ +PD Y TL++ R L EA KL KG
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
NP IV YN ++ G+C+ G DA + M P+ +Y T++ G Q D A+
Sbjct: 515 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 574
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K + M+ P+ +LI GFC G + + + E+ G P+ T+ +++
Sbjct: 575 KMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSF 634
Query: 422 C 422
C
Sbjct: 635 C 635
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 4/293 (1%)
Query: 154 RSMLEFNCKPLPKQL---NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
R ++E N + L + N I++ H ++ A + + + G P+ +YN ++
Sbjct: 295 RLLMEMNSRGLTVNVQVYNTIIDARYKH-GHIVKAVETIEGMIECGCKPDIVTYNTLISG 353
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G +S A L + +G+MP+ SY L+ C++ +RA + L +M +G PD
Sbjct: 354 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 413
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y L++ L ++ A + +M +G PD YN ++ G C++ + A +L
Sbjct: 414 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 473
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M LP+ Y TLV G G D A+K +L I KG +P +A+IKG+C G
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 533
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ +A + + K AP E T+ ++ +++ ++ E+VK++ K
Sbjct: 534 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 14/255 (5%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF+ + G+ P YN M++ +C G + A N+M +R + PD +Y
Sbjct: 500 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 559
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G ++ ++ A + +M+ P+ ++YT+L+N CRK L + K+ M+ G
Sbjct: 560 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG 619
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V Y+ ++ FC+E + IDA E+M N C+PN V++ LV G G +++
Sbjct: 620 LVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISE 679
Query: 362 K--------------YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
K + MIS G++P + ++++ C G A + ++ G
Sbjct: 680 KGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGC 739
Query: 408 APHEDTWVMIVPQIC 422
P ++V ++ +C
Sbjct: 740 IPDSVSFVALLHGVC 754
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 5/264 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY L+ + D AL MLE P N ++ L + + PA
Sbjct: 412 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLC--KKFKLPAAK 469
Query: 188 LFKSAH-KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + VLP+ Y ++ F NG++ A LF E+G+ P + Y +++G
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ + A+ + M + PD +Y+T+++ ++ L A K+ M C P++
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y +++ GFCR+G + K+ +M + G +PN+V+Y L+G C + A + +
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE 649
Query: 367 MISKGFSPHFSVSHALIKGFCNVG 390
M+ P+ + L+ GF G
Sbjct: 650 MLMNKCVPNDVTFNYLVNGFSKNG 673
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 17/233 (7%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K+ + D + + + + P FTY +I Y + + D A K FR M++ CKP
Sbjct: 528 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKP 587
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + L + +F+ G++PN +Y+I++ +FC + A +
Sbjct: 588 NVVTYTSLINGF-CRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASF 646
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKS-----------QVNRA---VDLLEDMLNKGFVP 269
F +M +P+ ++ L+ G + Q N+ ++ M++ G+ P
Sbjct: 647 FEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAP 706
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ +Y ++L LC+ R A +L +M KGC PD V + ++ G C EGR+
Sbjct: 707 RSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRS 759
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 152/296 (51%), Gaps = 2/296 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P T S F+ +I + D AL FR M+ CK N +++ L ++ N L +
Sbjct: 415 PXTTS-FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL-SNSNRLEECY 472
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L K G P ++N + C D++ A + +M G P ++ Y +L++ L
Sbjct: 473 LLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 532
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + A + L +M+ +GF+PD ++Y+ ++ + K + +A ++ + +G PD+
Sbjct: 533 CKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDV 592
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ GFC+ R +A +L++M + G +P++V+Y L+ G C G D A +
Sbjct: 593 VAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSR 652
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+ K P+ LI G CN G+ D+A + E+ G +P+ +++ ++ +C
Sbjct: 653 MVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC 708
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 2/307 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+ LI + SN + + M +P N I L R + A D+ +
Sbjct: 454 LYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLC-RREDVTGALDMVRE 512
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
HG P K Y ++++ C + A +M G +PD+ +Y + G +
Sbjct: 513 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 572
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V++A+++ D+ +G+ PD ++Y TL+N C+ K++ EA+ +L M KG P +V YN
Sbjct: 573 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 632
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C+ G A L M PN+++Y TL+ GLC+ G D A M KG
Sbjct: 633 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 692
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP+ ALI G C G D A E+ + E P +V ++ + +
Sbjct: 693 CSPNRISFIALIHGLCKCGWPDAALLYFREMGER-ETPDTIVYVALITSFISNKNPTLAF 751
Query: 432 EVLNEIV 438
E+L E+V
Sbjct: 752 EILKEMV 758
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K V P T S++I++ C G + +A +LF M G +V Y L+ L +++
Sbjct: 410 KEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLE 469
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
LL++M GF P ++ ++ LCR++ + A ++ M+V G P I HY +V
Sbjct: 470 ECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLV 529
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
C+ R+ +AC L +M G LP++V+Y + G D A + + + ++G+
Sbjct: 530 KQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYC 589
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + LI GFC V +V EA +L+E++ G P T+ +++ C ++++
Sbjct: 590 PDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHC 649
Query: 434 LNEIVKVE 441
L+ +V E
Sbjct: 650 LSRMVGKE 657
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ + G N YN ++ + + Y L +M G P ++ +
Sbjct: 436 ALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFG 495
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LCR+ V A+D++ +M G P YT L+ LC++K+ EA L M +G P
Sbjct: 496 CLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLP 555
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV Y+ + GF + A ++ D+ + G P++V+Y TL+ G C A +
Sbjct: 556 DIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDIL 615
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++KG P + LI G+C G +D+A L ++ P+ T+ ++ +C
Sbjct: 616 DEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNA 675
Query: 425 EEMEKLGEVLNEI 437
+ + NE+
Sbjct: 676 GRPDDAIHLWNEM 688
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 186/421 (44%), Gaps = 39/421 (9%)
Query: 6 FLRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRV 65
FLR ++ T + A P + S + P +P+ Q+ + N S + V
Sbjct: 46 FLR---LICTKSSASFSSPHGAHITNALISIFTKQPFNPDNQE---LRNFGSMLTHEV-V 98
Query: 66 QKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
+ +++ +A F++AS Q F H+ TY + L A+ + + + + + +
Sbjct: 99 ENVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSR 158
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + K S D + M + +P L +L+ R + + A
Sbjct: 159 CAMSPGALGAISK----SGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDK-A 213
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G + + +I++ F G++ A+ L +M + G+ + +++ +L+ G
Sbjct: 214 LSVFNEIYGRGWV-DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHG 272
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R+S+V++A+ L + M GF PD Y L+ LC KK++ +A LL MK G +PD
Sbjct: 273 FVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPD 332
Query: 306 IVHYNTVVLGFCREGRAIDACKV----LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
I + ++ +C E +D ++ LED+ + L+ Y +++ GL + D A
Sbjct: 333 I-QILSKLIPYCSE--EVDIYRLIEERLEDLDTEAM---LLLYNSVLNGLVNGKSVDKAY 386
Query: 362 KYMQLMISKGFSPHFSVSH----------------ALIKGFCNVGKVDEACGVLEELLKA 405
+ M ++ +F V+ +I G CN GK+D A + ++++
Sbjct: 387 YLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRV 446
Query: 406 G 406
G
Sbjct: 447 G 447
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 39/262 (14%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+P +H Y +L+ +L + K + + L + E + ++ I + +
Sbjct: 518 HEPWIKH----YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAV 573
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+AL+ FR + P N ++ + + A D+ G++P+ +YN+
Sbjct: 574 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKR-VSEAHDILDEMVAKGLVPSVVTYNL 632
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ +C NGDI A+ ++M + P+V +Y L+ GLC + + A+ L +M KG
Sbjct: 633 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 692
Query: 267 -------FV---------------------------PDTLSYTTLLNSLCRKKKLREAYK 292
F+ PDT+ Y L+ S K A++
Sbjct: 693 CSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFE 752
Query: 293 LLCRMKVKGCNPDIVHYNTVVL 314
+L M KG PD + N + L
Sbjct: 753 ILKEMVAKGKFPDPLDKNDLPL 774
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 61/330 (18%)
Query: 127 PVTPSLFTYLIKIYAES--NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P + LI I+ + N ++ L+ F SML + ++E +++ +
Sbjct: 61 PHGAHITNALISIFTKQPFNPDNQELRNFGSMLT----------HEVVENVLSGLKSWKI 110
Query: 185 AFDLFKSAHKHGVLP-NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A+ F A G N +YN M A C +++ N M V S +
Sbjct: 111 AYRFFNWASDQGGFNHNCYTYNAM--ASC------LSHARQNAPLSLLSMDIVNSRCAMS 162
Query: 244 QGLCRKSQVNRAVDLLE----DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
G + ++DL+E +M + G+ PD + T++L + C +K +A + +
Sbjct: 163 PGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYG 222
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G V + +VL F + G A +++E M G N
Sbjct: 223 RGWVDGHV-LSILVLTFSKCGEVDKAFELIERMEDLGIRLN------------------- 262
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
K F LI GF +VD+A + +++ K+G AP + ++
Sbjct: 263 ---------EKTFC-------VLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIG 306
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
+CA +E+EK +L+E+ ++ I D +I+
Sbjct: 307 GLCAKKEIEKALHLLSEMKELGIDPDIQIL 336
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 135/253 (53%), Gaps = 1/253 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L K G+ P+ Y +M + C + + A L +M G P + ++ L+ G
Sbjct: 103 ELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR+ + A LL+ M G D ++Y TL++ LC+ +L+EA +LL RMK GC PD+
Sbjct: 163 CREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDV 222
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y++ V G C+ G+ ++A +VLE M + PN+V+Y T++ GLC G D A + M+
Sbjct: 223 VAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQ 282
Query: 367 MISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S G + ++ G C +G+ EA V+E + +AG P T+ +V +C
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 426 EMEKLGEVLNEIV 438
++E+ E + E+
Sbjct: 343 KIEEAVEAVREMA 355
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 180/377 (47%), Gaps = 18/377 (4%)
Query: 50 SSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK 109
+++ N S G P ++L+ + + A+ I QPN N L+ L + +
Sbjct: 14 NALVNGFSKQGRPGDCERLL----ETMAARGI------QPNVVSYNG----LLEGLCKLE 59
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
+ ++++ + S TP L TY L+ Y ++ + + + + ++ +P
Sbjct: 60 RWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+++ L L + + G P ++N ++ C ++ +A +L M
Sbjct: 120 YTKVMASLCKSARLGEALE-LLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
GV DV +Y LM GLC+ ++ A LLE M G PD ++Y++ + LC+ K+
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRT 346
A+++L +M+ +P++V YNT++ G C+ G+ A +++E M S+GC N+V Y T
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V GLC G A+ M+ M G P +L+ G C GK++EA + E+ G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 407 EAPHEDTWVMIVPQICA 423
P+ T+ +V +C+
Sbjct: 359 CKPNAVTYCSLVHGLCS 375
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 2/248 (0%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+ C P N ++ +N L A L ++ GV + +YN +M C G
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKN-LEMADSLLQTMAASGVKADVVTYNTLMDGLCKAG 201
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L +M G PDV +Y + GLC+ +V A +LE M + P+ ++Y
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T+L+ LC+ K+ A +++ +M GC ++V Y+TVV G C+ GR +A V+E M
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GC P++V+Y +LV GLC G + A + ++ M +G P+ +L+ G C+ G++ E
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381
Query: 395 ACGVLEEL 402
A ++EE+
Sbjct: 382 AERMVEEM 389
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 129/244 (52%), Gaps = 8/244 (3%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G PN+ ++N ++ F G L M RG+ P+V SY L++GLC+ + +
Sbjct: 3 RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62
Query: 254 RAVDLLEDMLNKG--FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A +L+ DM+++G PD ++Y+TLL+ C+ K+ E+ +LL + +G PD + Y
Sbjct: 63 EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
V+ C+ R +A ++LE+M GC P L+++ TL+ G C + ++A +Q M + G
Sbjct: 123 VMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ L+ G C G++ EA +LE + +G AP + V +C K G
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC------KSG 236
Query: 432 EVLN 435
+VLN
Sbjct: 237 KVLN 240
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 3/278 (1%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P F L+ +++ P + +M +P N +LE L + A
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERW-HEAE 65
Query: 187 DLFKSAHKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+L + G P+ +Y+ ++ +C G + + L ++ RG+ PD Y +M
Sbjct: 66 ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ +++ A++LLE+M+ G P +++ TL++ CR+K L A LL M G
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V YNT++ G C+ GR +A ++LE M ++GC P++V+Y + V GLC G A + +
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ M P+ + ++ G C GK+D A ++E++
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRILMQG 245
L ++ G+ PN SYN ++ C A L M RG PD+ +Y L+ G
Sbjct: 32 LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSG 91
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +V + +LL++++++G PD L YT ++ SLC+ +L EA +LL M GC P
Sbjct: 92 YCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPT 151
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ +NT++ G CRE A +L+ M ++G ++V+Y TL+ GLC G A++ ++
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M + G +P + + G C GKV A VLE++ + P+ T+ I+ +C
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSG 271
Query: 426 EMEKLGEVLNEIV 438
+++ E++ ++
Sbjct: 272 KIDTALEMMEQMA 284
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 7/305 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LI R K + D +L T+ + + L+ ++ A + M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P + + L L A + + PN +YN ++ C +G
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLN-AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Query: 217 ISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
I A + +M G +V Y ++ GLC+ + A ++E M G PD ++Y+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS- 334
+L+N LC+ K+ EA + + M ++GC P+ V Y ++V G C GR +A +++E+M S
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392
Query: 335 ----NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ C P++ +Y L+GGLC G D A K+ Q M S+G P +++G G
Sbjct: 393 GGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Query: 391 KVDEA 395
+ +A
Sbjct: 453 RALQA 457
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M GC P+ V +N +V GF ++GR D ++LE M + G PN+VSY L+ GLC
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 357 FDVAKKYMQLMISKG--FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ A++ ++ MIS+G +P L+ G+C GKV+E+ +L+E++ G P +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 415 VMIVPQIC 422
++ +C
Sbjct: 121 TKVMASLC 128
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G P+++++ L+N ++ + + +LL M +G P++V YN ++ G C+ R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 322 AIDACKVLEDMPSNG--CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+A +++ DM S G P+LV+Y TL+ G C G + +++ ++ +IS+G P +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ C ++ EA +LEE+++AG P T+ ++ C + +E +L +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 440 VEIKGD 445
+K D
Sbjct: 181 SGVKAD 186
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 186/447 (41%), Gaps = 57/447 (12%)
Query: 21 TFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKE 80
T PP PSL C S S+ +P ++ + ++ P R++ + S P L
Sbjct: 49 TLPPSLPSLFPCLSLLSRRL--TPHSVADALLCDALPPAS---RIRLFLFSALTPRL--- 100
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
R P HS + IL+ A + I D + P T + F LI +
Sbjct: 101 ------RSP-LLHSRAVVPILLATDADAAMYDAIAD---AQAAGLQPPTAA-FEALIFAH 149
Query: 141 AESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
A + A++ F M EF C+P N +L +LV + A L+ G LP
Sbjct: 150 ASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLP 209
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N +YN+++ C G A LF++M RG+ P+V+++ IL+ +C Q+ A +LL
Sbjct: 210 NRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLL 269
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL------------------------- 294
M +KG PD ++Y L+ LC+ ++ EA + L
Sbjct: 270 HSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFL 329
Query: 295 ---------CRMKV---KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
C M+V +PDIV Y ++ G GR DA ++M G P+
Sbjct: 330 AGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTF 389
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y TL+ LCD G D A+ M M+ +I G C VDEA V + +
Sbjct: 390 CYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGM 449
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEK 429
++ G P T+ +++ + +E+
Sbjct: 450 VEVGCHPSVMTYNVLIDGLYRAHRLEE 476
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 18/265 (6%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF F + G P+T YN +++A C GD+ A +L ++M V+ D+ +Y ++
Sbjct: 372 AFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMII 431
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ V+ A+ + + M+ G P ++Y L++ L R +L EA L +M+V G NP
Sbjct: 432 GLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEV-GNNP 490
Query: 305 --------------DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
D +V C+ G+ + A K+L + +G +P++V+Y TL+ G
Sbjct: 491 SLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNG 550
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC D A + + + KGF LI + ++A + +++L +G P
Sbjct: 551 LCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPS 610
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLN 435
+ ++ +C M+KL + +N
Sbjct: 611 MPIYNSMMRSLC---RMQKLSQAIN 632
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 147/367 (40%), Gaps = 56/367 (15%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ TY + I+ + P ALK F M+ P K + IL + + L+ A +
Sbjct: 209 PNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKT-HTILLSSMCNAGQLKEAEN 267
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT--------------------LFNKM 227
L S G P+ +YN + C G + A L + +
Sbjct: 268 LLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGL 327
Query: 228 FERG-----------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
F G V PD+ Y I+++G + N A ++M KGF PD
Sbjct: 328 FLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPD 387
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
T Y TLL +LC L A L+ M DI Y T+++G C+E +A +V +
Sbjct: 388 TFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFD 447
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-------------YMQLMISKGFSPHFS 377
M GC P++++Y L+ GL + A+ +++L +
Sbjct: 448 GMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSE 507
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L++ C G+V +A +L ++ +G P T+ ++ +C ++ L L
Sbjct: 508 TLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLC---KVRNLDGALRLF 564
Query: 438 VKVEIKG 444
++++KG
Sbjct: 565 RELQVKG 571
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 68/336 (20%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-----------HY 126
A + + R RH+ + LG Y LID + + + E
Sbjct: 294 AGRVDEAIERLEALRHTGT------FVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQA 347
Query: 127 PVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
V+P L+T +I+ AE+ + A F M E P N +L+ L + L
Sbjct: 348 DVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGD-LDG 406
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L ++ V+ + +Y M+ C + A +F+ M E G P V +Y +L+
Sbjct: 407 ARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLID 466
Query: 245 GL------------------------------------------------CRKSQVNRAV 256
GL C+ QV +A
Sbjct: 467 GLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAY 526
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL +++ G VPD ++Y TLLN LC+ + L A +L ++VKG D + Y T++
Sbjct: 527 KLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSL 586
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
R R DA + +D+ +G P++ Y +++ LC
Sbjct: 587 LRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLC 622
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLF-- 189
+T +I + L D A++ F M+E C P N +++ L HR L A LF
Sbjct: 426 YTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHR--LEEARMLFYK 483
Query: 190 -----------KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + ++++ ++ + C +G + AY L + + GV+PDV +
Sbjct: 484 MEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVT 543
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC+ ++ A+ L ++ KGF D ++Y TL++SL R + +A L +
Sbjct: 544 YNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDIL 603
Query: 299 VKGCNPDIVHYNTVVLGFCR 318
G P + YN+++ CR
Sbjct: 604 HSGGTPSMPIYNSMMRSLCR 623
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 49/264 (18%)
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
+ L +++E + L+ A+ L + GV+P+ +YN ++ C ++ A LF
Sbjct: 507 ETLQKLVESMCQSGQVLK-AYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFR 565
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ +G D +Y L+ L R + N A+ L +D+L+ G P Y +++ SLCR +
Sbjct: 566 ELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQ 625
Query: 286 KLREA-----------YKLLCRMKV---------KGCNPDIVH----------------Y 309
KL +A Y LL + +V +GC + V Y
Sbjct: 626 KLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPY 685
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNG------CLPNLVSYRTLVGGLCDQGMFDVAKKY 363
++G + GR DA K+ + +G C +L Y LC +G A
Sbjct: 686 TIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKY------LCLEGNLGAAVDV 739
Query: 364 MQLMISKGFSPHFSVSHALIKGFC 387
M + KGF+ V + L+ C
Sbjct: 740 MLYTLKKGFTMRRYVGNRLLCSLC 763
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L K ++G + N+ Y I + G I A +F+ + E G+ L + L
Sbjct: 669 ELIKIDQEYGSV-NSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYL 727
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C + + AVD++ L KGF LL SLC + ++A L RM + G + D
Sbjct: 728 CLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRMHLVGYDMD 786
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 160/339 (47%), Gaps = 4/339 (1%)
Query: 111 FSLIDDILITLK---SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
F+ +DD L + H P + + FT L+ + L M F P
Sbjct: 37 FNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 96
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN ++ H L AF + K G PN ++N ++R C G I LF+KM
Sbjct: 97 LNILINSFC-HLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G P+V +Y L+ GLC+ + A+ LL M PD + YT++++SLC+ +++
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+A+ L M +G +P I YN+++ C +L +M ++ +PN+V + T+
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V LC +G A + +MI +G P+ +AL+ G C ++DEA V + ++ G
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
AP ++ ++ C + +EK + E+ + E+ +T
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 161/332 (48%), Gaps = 7/332 (2%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYL 182
H ++PS+FTY I+A NL + T N K +P + + +++ L +
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D+ K GV PN +YN +M C ++ A +F+ M +G PDV SY L
Sbjct: 287 E-AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 345
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++ +A+ L E+M K +P+T++Y+TL++ LC +L++A L M +G
Sbjct: 346 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 405
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V Y ++ C+ R +A +L+ + + P++ Y ++ G+C G + A+
Sbjct: 406 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 465
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ SKG P+ +I G C G + EA + E+ + G +P+ T+ +I
Sbjct: 466 LFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 525
Query: 423 AGEE----MEKLGEVLNEIVKVEIKGDTRIVE 450
E ++ L E+L ++ T +VE
Sbjct: 526 RNNETLRGIQLLQEMLARGFSADVSTSTVLVE 557
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 48/416 (11%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I S C +Q+L + S +LAK + QPN N+ L ++ + L D ++
Sbjct: 101 INSFCHLQRLGFAFS--VLAKIL--KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 156
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
E + P++ TY LI + A++ RSM + NC+P I++ L
Sbjct: 157 ----GEGFQ--PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 210
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF----------------------- 213
R + AF+LF G+ P+ +YN ++ A C
Sbjct: 211 KDRQ-VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 269
Query: 214 ------------NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
G + A+ + + M +RGV P+V +Y LM G C +S+++ AV + +
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT 329
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M+ KGF PD +SY+TL+N C+ +++ +A L M K P+ V Y+T++ G C GR
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 389
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA + +M + G +P+ VSY L+ LC D A ++ + P +
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 449
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I G C G+++ A + L G P+ T+ +++ +C + + ++ E+
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 135/264 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L +S + P+ Y ++ + C + ++ A+ LF++M +G+ P + +Y L+
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC + LL +M+N +P+ + ++T++++LC++ K+ EA+ ++ M +G P
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN ++ G C +A KV + M G P++VSY TL+ G C + A
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M K P+ L+ G C+VG++ +A + E++ G+ P ++ +++ +C
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+++ +L I + D +I
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQI 446
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + +Y LI Y + ++A+ F M P + ++ L H L+ A
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC-HVGRLQDAIA 395
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G +P+ SY I++ C N + A L + + PD++ Y I++ G+C
Sbjct: 396 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC 455
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++ A DL ++ +KG P+ +YT ++N LC++ L EA KL MK KG +P+
Sbjct: 456 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 515
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
YN + GF R + ++L++M + G ++ + LV L D G+ K+ +
Sbjct: 516 TYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 572
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 160/339 (47%), Gaps = 4/339 (1%)
Query: 111 FSLIDDILITLK---SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
F+ +DD L + H P + + FT L+ + L M F P
Sbjct: 46 FNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 105
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN ++ H L AF + K G PN ++N ++R C G I LF+KM
Sbjct: 106 LNILINSFC-HLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G P+V +Y L+ GLC+ + A+ LL M PD + YT++++SLC+ +++
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+A+ L M +G +P I YN+++ C +L +M ++ +PN+V + T+
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V LC +G A + +MI +G P+ +AL+ G C ++DEA V + ++ G
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
AP ++ ++ C + +EK + E+ + E+ +T
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 161/332 (48%), Gaps = 7/332 (2%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYL 182
H ++PS+FTY I+A NL + T N K +P + + +++ L +
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A D+ K GV PN +YN +M C ++ A +F+ M +G PDV SY L
Sbjct: 296 E-AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTL 354
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++ +A+ L E+M K +P+T++Y+TL++ LC +L++A L M +G
Sbjct: 355 INGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQ 414
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD V Y ++ C+ R +A +L+ + + P++ Y ++ G+C G + A+
Sbjct: 415 IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ SKG P+ +I G C G + EA + E+ + G +P+ T+ +I
Sbjct: 475 LFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 534
Query: 423 AGEE----MEKLGEVLNEIVKVEIKGDTRIVE 450
E ++ L E+L ++ T +VE
Sbjct: 535 RNNETLRGIQLLQEMLARGFSADVSTSTVLVE 566
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 48/416 (11%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
I S C +Q+L + S +LAK + QPN N+ L ++ + L D ++
Sbjct: 110 INSFCHLQRLGFAFS--VLAKIL--KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 165
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
E + P++ TY LI + A++ RSM + NC+P I++ L
Sbjct: 166 ----GEGFQ--PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC 219
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF----------------------- 213
R + AF+LF G+ P+ +YN ++ A C
Sbjct: 220 KDRQ-VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 278
Query: 214 ------------NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
G + A+ + + M +RGV P+V +Y LM G C +S+++ AV + +
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT 338
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M+ KGF PD +SY+TL+N C+ +++ +A L M K P+ V Y+T++ G C GR
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 398
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA + +M + G +P+ VSY L+ LC D A ++ + P +
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 458
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+I G C G+++ A + L G P+ T+ +++ +C + + ++ E+
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 135/264 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L +S + P+ Y ++ + C + ++ A+ LF++M +G+ P + +Y L+
Sbjct: 192 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC + LL +M+N +P+ + ++T++++LC++ K+ EA+ ++ M +G P
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN ++ G C +A KV + M G P++VSY TL+ G C + A
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M K P+ L+ G C+VG++ +A + E++ G+ P ++ +++ +C
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+++ +L I + D +I
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQI 455
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
++ LI Y + ++A+ F M P + ++ L H L+ A LF
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC-HVGRLQDAIALFHEM 409
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G +P+ SY I++ C N + A L + + PD++ Y I++ G+CR ++
Sbjct: 410 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 469
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A DL ++ +KG P+ +YT ++N LC++ L EA KL MK KG +P+ YN +
Sbjct: 470 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
GF R + ++L++M + G ++ + LV L D G+ K+ +
Sbjct: 530 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 581
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A+ L NKM + +V Y ++ LC+ + A++L +M NKG P+ +
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC ++ +A +LL M + NP++V +N ++ F +EG+ ++A K+ ++M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++ +Y +L+ G C D AK +LMISK P+ + LI GFC ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
DE + E+ + G + T+ ++ + + V ++V
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 40/320 (12%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +PLP + N++L + + + L + + G+ N +Y
Sbjct: 67 DDAIGLFGGMVK--SRPLPSIFEFNKLLSAIAKMKKF-DLVISLGEKMQRLGISHNLYTY 123
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI++ FC IS+A L KM + G P + + L+ G C +++ AV L++ M+
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---- 320
G+ PDT+++TTL++ L K EA L+ RM +GC P++V Y VV G C+ G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 321 -------------------------------RAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
DA + +M + G PN+++Y +L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC+ + A + + MI + +P+ +ALI F GK+ EA + +E++K P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 410 HEDTWVMIVPQICAGEEMEK 429
T+ ++ C + +++
Sbjct: 364 DIFTYSSLINGFCMHDRLDE 383
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 167/348 (47%), Gaps = 5/348 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K F L+ I + K + ++ +L+TY LI + + AL M++
Sbjct: 91 LLSAIAKMKKFDLV--ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P L+ +L H + A L + G P+T ++ ++ + S
Sbjct: 149 LGYEPSIVTLSSLLNGY-CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L ++M +RG P++ +Y +++ GLC++ ++ A +LL M + + Y+T++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+SLC+ + +A L M+ KG P+++ Y++++ C R DA ++L DM
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+V++ L+ +G A+K MI + P +LI GFC ++DEA +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E ++ P+ T+ ++ C + +++ E+ E+ + + G+T
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF GV PN +Y+ ++ C S A L + M ER + P+V ++ L+
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YNT++ GFC+ R + ++ +M G + N V+Y TL+ G D A+
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G P+ + L+ G C GK+++A V E L ++ P T+ +++ +C
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 425 EEME 428
++E
Sbjct: 519 GKVE 522
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 153/335 (45%), Gaps = 5/335 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +++ +I + D
Sbjct: 222 QPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F M +P + ++ L + + A L + + PN ++N +
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERW-SDASRLLSDMIERKINPNVVTFNAL 336
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G + A L+++M +R + PD+ +Y L+ G C +++ A + E M++K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ ++Y TL+N C+ K++ E +L M +G + V Y T++ GF + +A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G PN+++Y TL+ GLC G + A + + P + +I+G C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
GKV++ + L G P + ++ C
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L A LF K LP+ +N ++ A + +L KM G+ ++
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ CR+SQ++ A+ LL M+ G+ P ++ ++LLN C K++ +A L+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD + + T++ G +A +A +++ M GC PNLV+Y +V GLC +G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+A + M + + + +I C D+A + E+ G P+ T+ +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI 442
+ +C E +L+++++ +I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKI 326
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 3/307 (0%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
KY D + + + E+ V P++ TY LI A + M+E P
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +++ V L A L+ K + P+ +Y+ ++ FC + + A +F
Sbjct: 332 TFNALIDAFVKE-GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + P+V +Y L+ G C+ +++ V+L +M +G V +T++YTTL++ + +
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
A + +M G +P+I+ YNT++ G C+ G+ A V E + + P + +Y
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ G+C G + + KG P + + +I GFC G +EA + ++ + G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 407 EAPHEDT 413
P T
Sbjct: 571 PLPDSGT 577
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 3/225 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF M + +P + + L+ + + + + + L E M G + +Y L+N
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR+ ++ A LL +M G P IV ++++ G+C R DA +++ M G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ +++ TL+ GL A + M+ +G P+ ++ G C G +D A +L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
++ A + + ++ +C + + LN ++E KG
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHED---DALNLFTEMENKG 290
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
YR +++ +++ A+ L M+ +P + LL+++ + KK L +M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G + ++ YN ++ FCR + A +L M G P++V+ +L+ G C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+ G+ P LI G K EA +++ +++ G P+ T+ ++V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C +++ +LN++ +I+ + I
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 176/375 (46%), Gaps = 44/375 (11%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH---YPVTPS 131
P A F + + F H+ +Y ++I LGR++ + + + +++ + +
Sbjct: 108 PAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDR 166
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
F LI+ Y + L ++K F++M E
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEI-------------------------------- 194
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKS 250
GV P+ ++N ++ G S+A LF++M + GV PD ++ IL++G C S
Sbjct: 195 ----GVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN--PDIVH 308
V+ ++M PD ++Y TL++ LCR K++ A+ ++ M K N P++V
Sbjct: 251 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y T++ G+C + +A +L +M S G PN ++Y TL+ GLC+ D K+ ++ M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 369 SK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
GF P + LIK C +GK++EA V E++ + P T+ ++V +C +
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430
Query: 428 EKLGEVLNEIVKVEI 442
+ E +E+ + EI
Sbjct: 431 RRAEEFFDELAEKEI 445
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 175/406 (43%), Gaps = 57/406 (14%)
Query: 96 STYLILILKLGRAKYF-SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
++ L ++LK GR L D++L T Y VTP +T+ LI+ + +++ D
Sbjct: 204 NSLLSIVLKRGRTSMAKQLFDEMLDT-----YGVTPDTYTFNILIRGFCMNSMVDEGFWF 258
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRA 210
F+ M F C P N +++ L ++ A ++ K K + PN +Y ++R
Sbjct: 259 FKEMSRFKCDPDVVTYNTLVDGLC-RAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRG 317
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVP 269
+C D++ A +L +M RG+ P+ +Y L+QGLC ++++ ++LE M+ + GF+P
Sbjct: 318 YCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIP 377
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
DT + TL+ + C KL EA+ + +M PD Y+ +V C+ G A +
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 437
Query: 330 EDMPSN-------GCLPNLV----------------------------------SYRTLV 348
+++ GC P + SY+TL+
Sbjct: 438 DELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLI 497
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C +G + + LM+ + F P +I G G A LE++LK+
Sbjct: 498 LGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 557
Query: 409 PHEDTW----VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
P + +V + CA E + +L ++ I T +E
Sbjct: 558 PTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTME 603
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 16/323 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSE--HYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
TY LI L A+ I +IL + + P T +L T LIK + + A F
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNT-LIKAHCTMGKLEEAFSVFE 403
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA-------HKHGVLPNTKSYNIM 207
M E +P + ++ L R R A + F H G P +YN M
Sbjct: 404 KMSELRVQPDSATYSVLVRSLC-QRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPM 462
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
C NG A +F ++ +RG D SY+ L+ G CR+ DLL ML + F
Sbjct: 463 FEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDF 521
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD +Y +++ L +K A+K L +M P +++++ +G A ++
Sbjct: 522 VPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESAS 581
Query: 328 VLEDMPSNGCLPNL-VSYRT---LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+++ M N+ +S T LV LC A+K + + K S + +I
Sbjct: 582 LVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVI 641
Query: 384 KGFCNVGKVDEACGVLEELLKAG 406
G C KV EA + EL++ G
Sbjct: 642 SGLCKAHKVSEAFALYYELVEKG 664
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 41/243 (16%)
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+ CKPL N + E L ++ + A +F+ K G + SY ++ C G
Sbjct: 449 DVGCKPLVAAYNPMFEYLCSN-GKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTP 506
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
+ L M R +PD E+Y +++ GL +K A LE ML +P T + ++
Sbjct: 507 EAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSI 566
Query: 278 LNSL---------------------------------------CRKKKLREAYKLLCRMK 298
L +L C+ +KL EA K+L
Sbjct: 567 LAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSL 626
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
K + DI +TV+ G C+ + +A + ++ G L L L +G +
Sbjct: 627 EKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLN 686
Query: 359 VAK 361
AK
Sbjct: 687 EAK 689
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE----SYRILM 243
+ KS+H LP T ++ ++ A G + +L M ER + +++ + L+
Sbjct: 551 MLKSSH----LPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELV 606
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ ++ A +L L K D +T+++ LC+ K+ EA+ L + KG
Sbjct: 607 SFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQ 666
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ + + EGR +A V + MP
Sbjct: 667 HRLTCQEDLRISLEAEGRLNEAKFVSKKMP 696
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 176/375 (46%), Gaps = 44/375 (11%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH---YPVTPS 131
P A F + + F H+ +Y ++I LGR++ + + + +++ + +
Sbjct: 108 PAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDR 166
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
F LI+ Y + L ++K F++M E
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEI-------------------------------- 194
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKS 250
GV P+ ++N ++ G S+A LF++M + GV PD ++ IL++G C S
Sbjct: 195 ----GVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN--PDIVH 308
V+ ++M PD ++Y TL++ LCR K++ A+ ++ M K N P++V
Sbjct: 251 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
Y T++ G+C + +A +L +M S G PN ++Y TL+ GLC+ D K+ ++ M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 369 SK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
GF P + LIK C +GK++EA V E++ + P T+ ++V +C +
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430
Query: 428 EKLGEVLNEIVKVEI 442
+ E +E+ + EI
Sbjct: 431 RRAEEFFDELAEKEI 445
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 134/351 (38%), Gaps = 44/351 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSE--HYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
TY LI L A+ I +IL + + P T +L T LIK + + A F
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNT-LIKAHCTMGKLEEAFSVFE 403
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA-------HKHGVLPNTKSYNIM 207
M E +P + ++ L R R A + F H G P +YN M
Sbjct: 404 KMSELRVQPDSATYSVLVRSLC-QRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPM 462
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
C NG A +F ++ +RG D SY+ L+ G CR+ DLL ML + F
Sbjct: 463 FEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDF 521
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VPD +Y +++ L +K A+K L +M P +++++ +G A ++
Sbjct: 522 VPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESAS 581
Query: 328 VLEDMPSNGCLPN--------------------------------LVSYRTLVGGLCDQG 355
+++ M N LV LV LC
Sbjct: 582 LVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSR 641
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A+K + + K S + +I G C KV EA + EL++ G
Sbjct: 642 KLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKG 692
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 32/209 (15%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
FDL + +P+ ++Y +M+ GD +A+ KM + +P + ++
Sbjct: 509 GFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILA 568
Query: 245 GLCRKSQVNRAVDLLEDML------------------------NKGFVPDTLSYTT---- 276
L K + + L++ ML +K F+ L Y
Sbjct: 569 ALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLV 628
Query: 277 ----LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
L++ LC+ +KL EA K+L K + DI +TV+ G C+ + +A + ++
Sbjct: 629 KMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYEL 688
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
G L L L +G + AK
Sbjct: 689 VEKGMQHRLTCQEDLRISLEAEGRLNEAK 717
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 177/371 (47%), Gaps = 37/371 (9%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A F++A +Q + HS Y ++I L + + + ++ D++ ++ + + F ++
Sbjct: 61 AFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGM-LNVETFCIMM 119
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ YA +N D A+ TF M +++ P N +L L N +R A ++F A K
Sbjct: 120 RKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNN-VRKAQEIF-DAMKGQF 177
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P+ KSY+I++ + ++ A +F +M E G PDV +Y I++ LC+ +V+ AV+
Sbjct: 178 VPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVE 237
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
++++M P + Y+ L+++ + ++ +A M KG D+V YN ++ FC
Sbjct: 238 VVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFC 297
Query: 318 REGRAIDACKVLEDMPSNG----------------------------------CLPNLVS 343
+ + + +VL++M SNG C P+ +
Sbjct: 298 KVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKLCEPDADT 357
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ C++ ++A K + M SK F P ALIKG C +AC V+EE++
Sbjct: 358 YTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMI 417
Query: 404 KAGEAPHEDTW 414
+ G P T+
Sbjct: 418 EKGIRPSRITF 428
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 10/287 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+EIFD Q F +Y IL+ G+A ++ + P + TY
Sbjct: 166 AQEIFDAMKGQ--FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEA--GCDPDVVTYGI 221
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL-VTHRNYLRPAFDLFKSAHK 194
++ + ++ D A++ + M NC+P + ++ V HR + A D F K
Sbjct: 222 MVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHR--IEDAIDTFLEMAK 279
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ + +YN ++ AFC + + +M GV P+ + +++ + + Q +R
Sbjct: 280 KGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDR 339
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A + M+ K PD +YT ++ C K +L A K+ MK K P + ++ ++
Sbjct: 340 AFRVFCRMI-KLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIK 398
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
G C + A AC V+E+M G P+ +++ L L +G DV K
Sbjct: 399 GLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLK 445
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 38/272 (13%)
Query: 184 PAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
PAF F+ A K G + ++Y++M+ + I + L + M ++G M +VE++ I+
Sbjct: 60 PAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKG-MLNVETFCIM 118
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
M+ R ++V+ AV M VP+ ++ LL++LC+ +R+A ++ MK +
Sbjct: 119 MRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFV 178
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD Y+ ++ G+ + A +V +M GC P++V+Y +V L
Sbjct: 179 -PDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVL----------- 226
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
C G+VDEA V++E+ P + ++V
Sbjct: 227 ------------------------CKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYG 262
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+E + E+ K IK D A IG
Sbjct: 263 VEHRIEDAIDTFLEMAKKGIKADVVAYNALIG 294
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 195/438 (44%), Gaps = 55/438 (12%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI------------- 114
L+ QS+ + A F++ + R S+ Y ++I L ++ F L
Sbjct: 109 LLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD 168
Query: 115 ----DDIL--ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
+D+ + L +EH P +F LIK Y + +L + +F+ M++ P
Sbjct: 169 VSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIAC 228
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N IL L ++ + ++L++ + GV N ++NI+ C +GD++ KM
Sbjct: 229 NCILNGLAKMKSDAQ-CWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKME 287
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E G PDV +Y L+ R+ ++ A L + M +G +PD +SYT+L+ LCR ++R
Sbjct: 288 EEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVR 347
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA++L RM +G +PD+V YNT++ +C++G +A +L +M G P+ + R LV
Sbjct: 348 EAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILV 407
Query: 349 GG-----------------------------------LCDQGMFDVAKKYMQLMISKGFS 373
G LC + AK ++ ++ F
Sbjct: 408 EGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQ 467
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + + LI+ FC V EA + E++ P DT+ ++ +C +
Sbjct: 468 PDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGL 527
Query: 434 LNEIVKVEIKGDTRIVEA 451
+ E+V+ E+ D I A
Sbjct: 528 MVEMVESEVIPDHEICRA 545
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 17/289 (5%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R L AF L+K ++ GV+P+ SY +MR C G + A+ LF++M +RG+ PDV
Sbjct: 308 RGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVL 367
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ C+ + A LL +M+ G PD+ + L+ R+ +L A L+ ++
Sbjct: 368 YNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQ 427
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G Y +++ CRE R A +LE + + P+ Y L+ C
Sbjct: 428 KLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVS 487
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A MI++ + P +LI C + + + G++ E++++ P + +V
Sbjct: 488 EALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALV 547
Query: 419 PQICA---GEEMEKL------------GEVLNEIVKV--EIKGDTRIVE 450
C ++ E L E N +VKV ++ +T+++E
Sbjct: 548 NGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLME 596
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 15/261 (5%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSML-------EFNCKPLPKQLNRILELLVTHRNYLRP 184
L+ LI Y + + A M+ F C+ L + R L
Sbjct: 367 LYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGR--------EGRLIS 418
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L K GV Y ++ + C A +L ++ E PD + Y L++
Sbjct: 419 ALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIE 478
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
CR + V+ A+ L +M+N+ + P T +Y +L++ +C + + L+ M P
Sbjct: 479 SFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIP 538
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D +V G+C+EG A A +L + + S+ +LV D G +
Sbjct: 539 DHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQ 598
Query: 365 QLMISKGFSPHFSVSHALIKG 385
M+ GF P+ +I G
Sbjct: 599 DRMLKAGFLPNSLTCRYIIHG 619
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 120/320 (37%), Gaps = 63/320 (19%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N+++ D+ S+H +Y +++ ++ +A +++ E + DV S
Sbjct: 124 NWVKYDLDIRLSSH---------NYCLIIHILAWSRQFPLAMKFLSELIE--LSKDVSSS 172
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ Q L ++ ++ +ML K +V L + E+Y +M
Sbjct: 173 EDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDL--------------IHESYWSFKKMVK 218
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G P+++ N ++ G + ++ E+M G N ++ L LC G +
Sbjct: 219 LGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNK 278
Query: 360 AKKYMQLMISKGFSPHFSVSHALI-----------------------------------K 384
+++ M +GF P + LI +
Sbjct: 279 INGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMR 338
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C +G+V EA + ++ G P + ++ C +++ +L+E++ + I
Sbjct: 339 GLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHP 398
Query: 445 DT---RIVEAGIGLEDYLIG 461
D+ RI+ G G E LI
Sbjct: 399 DSFTCRILVEGYGREGRLIS 418
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 161 CKPLPKQLNRI--LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
C L K L R +EL+ + ++ A G+ P+ +Y+ + A C D
Sbjct: 213 CNGLLKDLLRADAMELVWKLKGFMEGA----------GIPPDVYTYSTFLEAHCKARDFD 262
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A +F +M R + +Y +++ GLCR V A E+M++ G PD +Y L+
Sbjct: 263 AAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALM 322
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N LC+ +L+EA LL M G P++V Y T+V GF +EG+A +A +L +M S G
Sbjct: 323 NGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQ 382
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN + Y L+ GLC G A K + MI G P H L++G D A +
Sbjct: 383 PNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFEL 442
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
L E+ +G P+ T+ +++ +C E ++ G +L E++ +K
Sbjct: 443 LNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLK 487
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AFD+ GV PN Y+ ++R C G + A L N+M + G PD +Y LMQ
Sbjct: 369 AFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQ 428
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G + + A +LL +M N G +P+ +Y ++N LC+ + +EA LL M +G P
Sbjct: 429 GHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKP 488
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ Y +++G +EG AC+ LE+M LP+L Y +L+ GL G + A++Y
Sbjct: 489 NAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYY 548
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ +G P LI G+C +++A +L+++L +G P+ DT+ ++
Sbjct: 549 AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKS 608
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+ EK+ +L ++ K D I
Sbjct: 609 NDHEKVSSILQSMLGSGDKPDNHI 632
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 1/347 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY + +A+ F + ++ + + +I S + A M
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+++ P ++ L L+ A L G+ PN Y ++ F G
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKG-GRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGK 365
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A+ + N+M GV P+ Y L++GLC+ Q+ RA LL +M+ G PDT +Y
Sbjct: 366 AAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHP 425
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ + A++LL M+ G P+ Y ++ G C+ G + +A +LE+M S G
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG 485
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PN Y L+ G +G +A + ++ M P ++LIKG VG+++EA
Sbjct: 486 LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE 545
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ K G P E T+ ++ C +EK ++L +++ +K
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 160/355 (45%), Gaps = 6/355 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y LI+ + + SL + L + + V P LF Y LIK + + A + +
Sbjct: 493 YAPLIIGHSKEGHISLACESLENMTKAN--VLPDLFCYNSLIKGLSTVGRIEEAEEYYAQ 550
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+ + P + ++ RN L A L + G+ PN +Y ++ + +
Sbjct: 551 VQKRGLVPDEFTYSGLIHGYCKTRN-LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSN 609
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
D ++ M G PD Y I+++ L R + A +L ++ G VPD Y+
Sbjct: 610 DHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYS 669
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L++ LC+ + +A LL M +G P IV YN ++ GFCR G A V + + +
Sbjct: 670 SLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK 729
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G LPN V+Y L+ G C G A + M+ +G +P V + L G + +++A
Sbjct: 730 GLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQA 789
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
+ EE+ G A H + +V C +++ ++L+ ++ EI + + VE
Sbjct: 790 LFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVE 843
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 2/306 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI + + D +L + + +T L++ Y +SN ++ +SM
Sbjct: 562 TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L KP ++ L N + AF + K+G++P+ Y+ ++ C D
Sbjct: 622 LGSGDKPDNHIYGIVIRNLSRSEN-MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD 680
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L ++M + G+ P + Y L+ G CR ++RA ++ + +L KG +P+ ++YT
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTA 740
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ C+ + +A+ L M +G PD YN + G C + ++ L + N
Sbjct: 741 LIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG-CSDAADLEQALFLTEEMFNR 799
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
++ + TLV G C +G +K + +M+ + P+ +I F GK+ EA
Sbjct: 800 GYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAH 859
Query: 397 GVLEEL 402
V EL
Sbjct: 860 RVFAEL 865
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 154/333 (46%), Gaps = 1/333 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I+I L + ++L + SE ++ LI +++ A ++ +M
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ N P N +++ L T + A + + K G++P+ +Y+ ++ +C +
Sbjct: 517 TKANVLPDLFCYNSLIKGLST-VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M G+ P+ ++Y L++G + + + +L+ ML G PD Y
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGI 635
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ +L R + + A+ +L ++ G PD+ Y++++ G C+ A +L++M G
Sbjct: 636 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG 695
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P +V Y L+ G C G A+ +++KG P+ ALI G C G + +A
Sbjct: 696 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAF 755
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ +++L G AP + ++ ++E+
Sbjct: 756 DLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQ 788
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 1/324 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
DIL + S ++ LI+ + RA K M++ +P + +++
Sbjct: 371 DILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGH 430
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
H + AF+L G+LPN +Y IM+ C NG+ A L +M G+ P+
Sbjct: 431 FQHYDK-DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPN 489
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
Y L+ G ++ ++ A + LE+M +PD Y +L+ L ++ EA +
Sbjct: 490 AFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYA 549
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+++ +G PD Y+ ++ G+C+ A ++L+ M ++G PN +Y L+ G
Sbjct: 550 QVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSN 609
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
+ +Q M+ G P + +I+ ++ A VL E+ K G P +
Sbjct: 610 DHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYS 669
Query: 416 MIVPQICAGEEMEKLGEVLNEIVK 439
++ +C +MEK +L+E+ K
Sbjct: 670 SLISGLCKMADMEKAVGLLDEMAK 693
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%)
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
T ++++ + NG + A + M + G+ P L++ L R + L
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G PD +Y+T L + C+ + A K+ M+ + C + V YN ++ G CR G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+A E+M G P+ +Y L+ GLC G AK + M G P+ V
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
L+ GF GK EA +L E++ AG P++ + ++ +C ++ + ++LNE++KV
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414
Query: 441 EIKGDT 446
+ DT
Sbjct: 415 GHRPDT 420
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 143/327 (43%), Gaps = 11/327 (3%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRIL--ELLVTH--RNY 181
+ P+ +TY I I ++ A M+ KP N + L++ H +
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKP-----NAFMYAPLIIGHSKEGH 505
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + ++ K VLP+ YN +++ G I A + ++ +RG++PD +Y
Sbjct: 506 ISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSG 565
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ + +A LL+ MLN G P+ +YT LL + + +L M G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD Y V+ R A VL ++ NG +P+L Y +L+ GLC + A
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +G P +ALI GFC G + A V + +L G P+ T+ ++
Sbjct: 686 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGN 745
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRI 448
C ++ ++ +++ I D +
Sbjct: 746 CKNGDITDAFDLYKDMLDRGIAPDAFV 772
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 117/242 (48%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P + N +++ + + + L M G+ PDV +Y ++ C+ + A
Sbjct: 205 GLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAA 264
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ E+M + + ++Y +++ LCR + EA+ M G +PD Y ++ G
Sbjct: 265 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 324
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ GR +A +L++M +G PN+V Y TLV G +G A + MIS G P+
Sbjct: 325 LCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPN 384
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI+G C +G++ A +L E++K G P T+ ++ + + E+LN
Sbjct: 385 KIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLN 444
Query: 436 EI 437
E+
Sbjct: 445 EM 446
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G P+T +Y+ +M+ + D A+ L N+M G++P+ +Y I++ GLC+ +
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A +LLE+M+++G P+ Y L+ ++ + A + L M PD+ YN+++
Sbjct: 473 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLI 532
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G GR +A + + G +P+ +Y L+ G C + A + +Q M++ G
Sbjct: 533 KGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ L++G+ ++ +L+ +L +G+ P + +++ + E ME V
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 652
Query: 434 LNEIVKVEIKGDTRI 448
L E+ K + D I
Sbjct: 653 LTEVEKNGLVPDLHI 667
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RALKT 152
N Y I+I L R++ + ++ + E + P L Y I + D +A+
Sbjct: 630 NHIYGIVIRNLSRSENMEVA--FMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGL 687
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M + +P N +++ + R A ++F S G+LPN +Y ++ C
Sbjct: 688 LDEMAKEGLEPGIVCYNALIDGFCRSGDISR-ARNVFDSILAKGLLPNCVTYTALIDGNC 746
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRIL------------------------------ 242
NGDI+ A+ L+ M +RG+ PD Y +L
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL 806
Query: 243 ----MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
++G C++ ++ LL M+++ VP+ + ++ + KL EA+++ ++
Sbjct: 807 FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866
Query: 299 VK 300
K
Sbjct: 867 QK 868
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 176/386 (45%), Gaps = 39/386 (10%)
Query: 61 SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP V +++ + S+ +LA F +A RQ F ++ ++ LI LG+ K F L+ ++
Sbjct: 144 SPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVE 203
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++ ++ F +++ YA + A++TF M F K N ++++L +
Sbjct: 204 AMRCRGL-LSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSK 262
Query: 180 NYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ A +FK ++G +P+ K+Y ++M + D+ + +++ +M + G+ PDV +
Sbjct: 263 Q-VKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVA 321
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL----------------- 281
Y +L+ C+ + + A+ + +M G +P Y L+N L
Sbjct: 322 YGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSK 381
Query: 282 ------------------CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
CR K + A+K++ M+ G P+ Y+ ++ + +
Sbjct: 382 ASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIE 441
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A V + M +GC P L +Y +VG C DVA K M KG P + ALI
Sbjct: 442 EAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALI 501
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAP 409
G C +++EAC +E+L G P
Sbjct: 502 NGLCFENRLEEACAYFQEMLDRGIRP 527
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
R + L ++ G+L + ++ +++R + + A F KM G+ D+ Y
Sbjct: 195 FRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNW 253
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ L + QV +A + ++M G FVPD +YT L+ +K L + M
Sbjct: 254 LIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDA 313
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+V Y ++ FC+ G+ +A KV +M +NGC+P+ Y L+ GL + D A
Sbjct: 314 GLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEA 373
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
KY +L + GF +A++ +C K A +++E+ K+G P+ T+ +I+
Sbjct: 374 LKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHH 433
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+ +++E+ V + K
Sbjct: 434 LIKSQKIEEAYNVFQGMSK 452
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 1/285 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A IF R F TY +L+ G K ++ + + + LI
Sbjct: 267 AHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLI 326
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ +S D A+K FR M C P P ++ L + L A F+ + G
Sbjct: 327 SSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEER-LDEALKYFELSKASGF 385
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ N ++ A+C + A+ + ++M + G+ P+ +Y I++ L + ++ A +
Sbjct: 386 PMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYN 445
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ + M G P +YT ++ C +++ A K+ +MK KG P + ++ ++ G C
Sbjct: 446 VFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLC 505
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
E R +AC ++M G P + L L + G +A++
Sbjct: 506 FENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQE 550
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 5/280 (1%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ E+L N A F+ A + G + S++ ++ A + ++L M
Sbjct: 148 VAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRC 207
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
RG++ +++R++++ R +V AV+ E M G D Y L++ L + K++++
Sbjct: 208 RGLLSK-DTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKK 266
Query: 290 AYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A+ + MK G PD+ Y ++ G+ E + V ++M G P++V+Y L+
Sbjct: 267 AHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLI 326
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
C G D A K + M + G P V LI G + ++DEA EL KA
Sbjct: 327 SSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYF-ELSKASGF 385
Query: 409 PHE-DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
P E T +V C + + ++++E+ K I ++R
Sbjct: 386 PMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSR 425
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 94 SNSTYLILILKLGRA-------KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
S Y +LI LG KYF L K+ +P+ ++ Y S+
Sbjct: 353 SPHVYCMLINGLGSEERLDEALKYFELS-------KASGFPMEVPTCNAVVGAYCRSSKF 405
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
A K M + P + + IL L+ + + A+++F+ K G P +Y +
Sbjct: 406 QHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQK-IEEAYNVFQGMSKDGCEPQLNTYTM 464
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ FC N + +A ++N+M E+GV+P + + L+ GLC ++++ A ++ML++G
Sbjct: 465 MVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRG 524
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
P ++ L +L ++ A ++ ++
Sbjct: 525 IRPPGQLFSNLKEALIEGGRISLAQEMALKL 555
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 175/371 (47%), Gaps = 7/371 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A ++FD +++ TY ILI L +A+ L + +K +FTY
Sbjct: 1035 AVQLFDEMTKK-GLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN---CKGDVFTYGM 1090
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+I + + AL F M+ P + +++ L L+ A + FK
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF-GRLKEALEFFKEMEGR 1149
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ + +YN ++ G N M +RG PD ++ IL+ GLC++ +V A
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+LE M +KG PD L+Y TL+N LC +L +A KL + +G ++ YN ++ G
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+C++ + +A + E+M G P+ V+Y TL+G LC G A+K M + G
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
S L+ G C G ++EA + + + K P+ + + +++ +C ++E+ + +
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 436 EIVKVEIKGDT 446
EI K ++ DT
Sbjct: 1390 EISKNGLEPDT 1400
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+F G+LP+ Y+ +M C G + A F +M RG+ DV +Y L+
Sbjct: 1104 ALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIH 1163
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL R L M+++GF PD ++T L++ LC++ K+ EA ++L M+ KG P
Sbjct: 1164 GLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEP 1223
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ YNT++ G C G+ DA K+ E + G N+ SY L+ G C D A ++
Sbjct: 1224 DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFF 1283
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M KG P + LI C G+V A + E+ G+ T+ +++ +C
Sbjct: 1284 EEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 1343
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+E+ ++ I K E K + +
Sbjct: 1344 GHLEEAMDLFQSIKKTEHKPNIEV 1367
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 136/279 (48%), Gaps = 1/279 (0%)
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
V N + A LF K G+L + K+Y I++ C +A L KM + D
Sbjct: 1026 VWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGD 1084
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y +++ LC+ A+D+ +M+ G +PD + Y++L++ LCR +L+EA +
Sbjct: 1085 VFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 1144
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M+ +G + D+ YN+++ G R G + L M G P+ ++ L+ GLC +G
Sbjct: 1145 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 1204
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A++ ++LM KG P + L+ G C VG++++A + E L G + ++
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ C +++++ E+ +K T IG
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
HK G P+ +YN +M C G + A LF + +RG+ +V SY IL+ G C+ ++
Sbjct: 1218 HK-GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 1276
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A E+M KG P T++Y TL+ +LC+ ++R A KL M+ G + Y +
Sbjct: 1277 DEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 1336
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G +A + + + PN+ + L+ G+C G + A K + G
Sbjct: 1337 LDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + LI G CN G + EA +L ++ + G P T+ +I+ + E+ + +
Sbjct: 1397 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 1456
Query: 433 VLNEI 437
+L E+
Sbjct: 1457 LLEEM 1461
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 35/329 (10%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K F L P N +L V Y F +++ + G+ P+ + NI++
Sbjct: 930 AIKLFDRSLCSEPMPCTDTFNHLLAS-VAKLGYYSTVFPMYRKINDVGIQPDLYTLNILI 988
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C + + +F +RG PD + L++G+ ++ + AV L ++M KG +
Sbjct: 989 HCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLL 1048
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKL---------------------LCR----------- 296
D +Y L+N LC+ +K A KL LC+
Sbjct: 1049 GDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMF 1108
Query: 297 --MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M G PD+V Y++++ G CR GR +A + ++M G ++ +Y +L+ GL
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 1168
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G++ ++ LM+ +GFSP LI G C GKV EA +LE + G+ P T+
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTY 1228
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ +C ++E ++ + IK
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLADRGIK 1257
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 3/286 (1%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M N P N I+ L + L A DL PN+ +Y I+M C G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKR-LEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEG 59
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A L +M +G+ DV Y L+ G C K ++R L ++ML KG P+ + Y+
Sbjct: 60 RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYS 119
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L+N C+K REA +L M +G PD+ Y ++ G C++GRA A + + M
Sbjct: 120 CLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P+ V+Y L+ GLC +G A K + M+ KG + LI G CN GK+DEA
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEA 239
Query: 396 CGVLEELLKAGEAPHED--TWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ LL+ G D T+ ++ +C ++K E+ + +++
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 162/363 (44%), Gaps = 40/363 (11%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P ++TY +I + +AL F M E +P N ++ L + A
Sbjct: 146 IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLC-KEGCIGDA 204
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRILM 243
F +F++ + G SYN ++ C NG + A LF+ + E G V PDV ++ ++
Sbjct: 205 FKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVI 264
Query: 244 QGLCRKSQVNRAVDLLEDMLNKG-----------------------------------FV 268
QGLC++ ++++AV++ + M+ +G V
Sbjct: 265 QGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLV 324
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P + +Y+ +++ C+ L A L RMK+ G +P + YNT++ C+E A ++
Sbjct: 325 PSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRL 384
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
++M + C P+ +S+ ++ G G AK+ + M G +P + I
Sbjct: 385 FQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSK 444
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+G+++EA G + ++ +G P + ++ +E+E++ +L ++ + + D I
Sbjct: 445 LGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEI 504
Query: 449 VEA 451
+
Sbjct: 505 TNS 507
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 4/331 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A ++FD + + S TY +LI L + I T+ + + + LI
Sbjct: 169 ALDLFDLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227
Query: 138 KIYAESNLPDRALKTFRSMLEFN--CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+ D A+K F S+LE +P N +++ L L A +++ + +
Sbjct: 228 MGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLC-KEGRLDKAVEIYDTMIER 286
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G N + +I++ + +G I A L+ ++ + G++P +Y +++ G C+ +N A
Sbjct: 287 GSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFA 346
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L M G P Y TL+ SLC++ L +A +L MK C PD + +N ++ G
Sbjct: 347 KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ G A ++L DM G P+ +Y + + L G + AK MI+ G +P
Sbjct: 407 TLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPD 466
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
V +LIKGF +++E +L ++ G
Sbjct: 467 NHVYDSLIKGFGLNDEIEEVINLLRQMADMG 497
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PDIV YNT++ G C+E R A +L +M + C PN +Y L+ GLC +G + A +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M KG V LI GFC+ G +D + +E+L+ G +P+ + ++ C
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ VL+ + + I+ D IG
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIG 158
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 26/307 (8%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTYL 136
A EI+D + +F + + ++++ G +ID + K H + PS TY
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILI----GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYS 331
Query: 137 IKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
+ I + + ++ + A F M P N ++ L + L A LF+ +
Sbjct: 332 VMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESS-LEQARRLFQEMKE 390
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
P+T S+NIM+ GDI A L N M + G+ PD +Y + L + Q+
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEE 450
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A + M+ G PD Y +L+ ++ E LL +M G D+ N+++
Sbjct: 451 AKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILT 510
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C + ++L + S +S CD+ + + K F+P
Sbjct: 511 FLCNSAEHLHVMELLPNFSSESSGGTSIS--------CDKLLMKIQK----------FNP 552
Query: 375 HFSVSHA 381
+S A
Sbjct: 553 KLQISAA 559
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 28/348 (8%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP RV KL+ S+ +P A IFD +R P + H+ + ++ +L
Sbjct: 9 SPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRL--------------- 53
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
P L + YA++++PD+AL F+ M E F C+P + N +L L+
Sbjct: 54 -------FDPKLVAH---AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI-ES 102
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N A F G+ PN ++YNI+++ C A L N M+ +G PDV SY
Sbjct: 103 NKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSY 162
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR-MK 298
L+ L + ++ A+ L ++M +G PD Y L++ +K + A ++ R +K
Sbjct: 163 GTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK 222
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P+I YN ++ G C+ G+ ++ ++ M N +L +Y TL+ GLC G D
Sbjct: 223 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 282
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A + + M G SP V + ++ G+ G+++E + + + K G
Sbjct: 283 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 330
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 12/371 (3%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D L A EI++ + P+ + +Y ++I L + F +I +K
Sbjct: 207 KGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 266
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-----F 186
++ LI S D A + ++ M E P N +L YLR
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN------GYLRAGRIEECL 320
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L+K K G SYNI++R N + A +++ + E+ D +Y +L+ GL
Sbjct: 321 ELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +N+A+ +LE+ N DT +Y++++N LCR+ +L E +L +M GC P+
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N V+ GF R + DA + +M S GC P +V+Y TL+ GL F A ++
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ KG+ P+ L+ G C K+D A + + L+ G P +I+ +C+ +
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559
Query: 427 MEKLGEVLNEI 437
+E ++ +E+
Sbjct: 560 VEDALQLYSEM 570
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 115/225 (51%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
KHG PN N ++ F + A F M +G P V +Y L+ GL + + +
Sbjct: 432 KHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 491
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L+++ML KG+ P+ ++Y+ L+N LC+ KKL A L C+ KG PD+ +N ++
Sbjct: 492 EAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 551
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C G+ DA ++ +M C+PNLV++ TL+ G F+ A K ++ G
Sbjct: 552 HGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQ 611
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + +KG C+ ++ +A G L + + G P TW ++V
Sbjct: 612 PDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 1/290 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +L+ L + Y + IL ++ + ++ +I D M
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ CKP P N ++ V + L A F + G P +YN ++
Sbjct: 431 TKHGCKPNPYVCNAVINGFV-RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 489
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
S AY L +M ++G P++ +Y +LM GLC+ +++ A++L L KGF PD +
Sbjct: 490 FSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 549
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ LC K+ +A +L MK + C P++V +NT++ GF + A K+ + + G
Sbjct: 550 IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 609
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
P+++SY + GLC A ++ + +G P + L++G+
Sbjct: 610 LQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 1/267 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++K ++GV P+ YN M+ + G I L+ M + G V SY I
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNI 339
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GL ++V+ A+ + E + K D+++Y L++ LC+ L +A +L +
Sbjct: 340 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 399
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D Y++++ G CREGR + VL+ M +GC PN ++ G + A
Sbjct: 400 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDAL 459
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M+SKG P + LI G + EA +++E+L+ G P+ T+ +++ +
Sbjct: 460 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGL 519
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRI 448
C G++++ + + ++ K D ++
Sbjct: 520 CQGKKLDMALNLWCQALEKGFKPDVKM 546
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 130/299 (43%), Gaps = 16/299 (5%)
Query: 165 PKQLN--RILELLVTHRNYLRPAFDLFKSAHK-----------HGVLPNTKSYNIMMRAF 211
PK L+ R+++LL + +N A +F S + H +L ++ A+
Sbjct: 5 PKSLSPKRVIKLLKSEKN-PHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAY 63
Query: 212 CFNGDISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
N A +F +M E G P + SY L+ L ++ + A G P+
Sbjct: 64 AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 123
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+Y L+ CRKK+ +A +LL M +G +PD+ Y T++ + G DA K+ +
Sbjct: 124 LQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 183
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQG-MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+MP G P++ Y L+ G +G + + ++ + +L+ P+ + +I G C
Sbjct: 184 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 243
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK DE+ + + K T+ ++ +C ++ V E+ + + D +
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVV 302
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 195/438 (44%), Gaps = 55/438 (12%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI------------- 114
L+ QS+ + A F++ + R S+ Y ++I L ++ F L
Sbjct: 105 LLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD 164
Query: 115 ----DDIL--ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
+D+ + L +EH P +F LIK Y + +L + +F+ M++ P
Sbjct: 165 VSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIAC 224
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N IL L ++ + ++L++ + GV N ++NI+ C +GD++ KM
Sbjct: 225 NCILNGLAKMKSDAQ-CWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKME 283
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
E G PDV +Y L+ R+ ++ A L + M +G +PD +SYT+L+ LCR ++R
Sbjct: 284 EEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVR 343
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA++L RM +G +PD+V YNT++ +C++G +A +L +M G P+ + R LV
Sbjct: 344 EAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILV 403
Query: 349 GG-----------------------------------LCDQGMFDVAKKYMQLMISKGFS 373
G LC + AK ++ ++ F
Sbjct: 404 EGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQ 463
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + + LI+ FC V EA + E++ P DT+ ++ +C +
Sbjct: 464 PDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGL 523
Query: 434 LNEIVKVEIKGDTRIVEA 451
+ E+V+ E+ D I A
Sbjct: 524 MVEMVESEVIPDHEICRA 541
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 17/289 (5%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R L AF L+K ++ GV+P+ SY +MR C G + A+ LF++M +RG+ PDV
Sbjct: 304 RGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVL 363
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ C+ + A LL +M+ G PD+ + L+ R+ +L A L+ ++
Sbjct: 364 YNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQ 423
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G Y +++ CRE R A +LE + + P+ Y L+ C
Sbjct: 424 KLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVS 483
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A MI++ + P +LI C + + + G++ E++++ P + +V
Sbjct: 484 EALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALV 543
Query: 419 PQICA---GEEMEKL------------GEVLNEIVKV--EIKGDTRIVE 450
C ++ E L E N +VKV ++ +T+++E
Sbjct: 544 NGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLME 592
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 15/261 (5%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSML-------EFNCKPLPKQLNRILELLVTHRNYLRP 184
L+ LI Y + + A M+ F C+ L + R L
Sbjct: 363 LYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGR--------EGRLIS 414
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L K GV Y ++ + C A +L ++ E PD + Y L++
Sbjct: 415 ALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIE 474
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
CR + V+ A+ L +M+N+ + P T +Y +L++ +C + + L+ M P
Sbjct: 475 SFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIP 534
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D +V G+C+EG A A +L + + S+ +LV D G +
Sbjct: 535 DHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQ 594
Query: 365 QLMISKGFSPHFSVSHALIKG 385
M+ GF P+ +I G
Sbjct: 595 DRMLKAGFLPNSLTCRYIIHG 615
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 120/320 (37%), Gaps = 63/320 (19%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N+++ D+ S+H +Y +++ ++ +A +++ E + DV S
Sbjct: 120 NWVKYDLDIRLSSH---------NYCLIIHILAWSRQFPLAMKFLSELIE--LSKDVSSS 168
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ Q L ++ ++ +ML K +V L + E+Y +M
Sbjct: 169 EDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDL--------------IHESYWSFKKMVK 214
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G P+++ N ++ G + ++ E+M G N ++ L LC G +
Sbjct: 215 LGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNK 274
Query: 360 AKKYMQLMISKGFSPHFSVSHALI-----------------------------------K 384
+++ M +GF P + LI +
Sbjct: 275 INGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMR 334
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C +G+V EA + ++ G P + ++ C +++ +L+E++ + I
Sbjct: 335 GLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHP 394
Query: 445 DT---RIVEAGIGLEDYLIG 461
D+ RI+ G G E LI
Sbjct: 395 DSFTCRILVEGYGREGRLIS 414
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 187/418 (44%), Gaps = 56/418 (13%)
Query: 76 LLAKEIFDYASRQPNFRHSNSTYLILILK--LGRAKYFSLIDDILITLKSEH-------- 125
+LA + + +QP ++ T+++ I L +A+ + IL L ++
Sbjct: 33 VLALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFG 92
Query: 126 -----YPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
YP+ P++F LI++Y + A+ TF SML KP N I+ +V
Sbjct: 93 VLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVK 152
Query: 178 H-RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ R +L +F FK V PN S+NI++ C G + A + M G +P +
Sbjct: 153 NCRAHLVWSF--FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTI 210
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
SY L+ C+K + A+ L+ M KG D +Y ++SLCR + + Y +L +
Sbjct: 211 VSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKK 270
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ K P+ V YNT++ GF +EG+ A +V +M PNL++Y L+ G C G
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGN 330
Query: 357 FDVAKKYMQLMISKGFSPH----------------FSV------------------SH-A 381
F+ A + + +M + P+ F V SH
Sbjct: 331 FEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTV 390
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I G C G +DEA +L E+ K G P T+ +++ C + K EV+++I +
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYR 448
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+ + K + PN SYN ++ F G I +A +FN+M E + P++ +Y IL+
Sbjct: 264 GYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C A+ +L+ M P+ ++ TLLN L + K A +L R + +
Sbjct: 324 GYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL 383
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + + ++ G CR G +A ++L +M +G P+++++ L+ G C G + AK+ M
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVM 443
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ +GF P+ + LI C VG V EA + G+ T +V +C
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCEN 503
Query: 425 EEMEKLGEVLNEIVKV 440
++ + E L+ I ++
Sbjct: 504 GKLVEAEEFLHHISRI 519
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 11/281 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+L TY LI Y + + AL+ M + +P + +L L Y
Sbjct: 311 LSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGL-----YKSAK 365
Query: 186 FDLFKSAHKHGVLPNTK----SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
FD+ ++ + + T S+ +M+ C NG + A+ L +M + GV PD+ ++ +
Sbjct: 366 FDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSV 425
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +N+A +++ + +GFVP+ + ++TL+ + C+ + EA K M + G
Sbjct: 426 LINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNG 485
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
N D N++V C G+ ++A + L + G +PN V++ ++ G + G A
Sbjct: 486 QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAF 545
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
MIS G P +L+K C EA +L++L
Sbjct: 546 SVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
R+ F + TY LIL L L +L +E + F LI+ E N
Sbjct: 763 RRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDL 822
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+ + +M F L K + + ++ R + F K G +P +K Y
Sbjct: 823 DKVIDLTHNMEVFRV-SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
MM+ C GDI A+ L ++M G+ D + +++GL ++ A+ +L+ ML
Sbjct: 882 MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+P T ++TTL++ C+K +EA+ L M+ DIV YN ++ C G I A
Sbjct: 942 KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGL 351
E++ G LPN+ +YR LV +
Sbjct: 1002 DFYEEIKQKGLLPNMTTYRVLVSAI 1026
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 148/331 (44%), Gaps = 3/331 (0%)
Query: 118 LITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
L+ K + +TP+ +Y LI + + A + F M+E N P N ++
Sbjct: 266 LVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGY 325
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ N+ A + + V PN + ++ + +A + + +
Sbjct: 326 CINGNF-EEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLN 384
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
S+ +++ GLCR ++ A LL +M G PD ++++ L+N C+ + +A +++
Sbjct: 385 CISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMS 444
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++ +G P+ V ++T++ C+ G +A K M NG + + +LV LC+ G
Sbjct: 445 KIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENG 504
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A++++ + G P+ +I G+ NVG A V + ++ G P T+
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYG 564
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ +C G+ + ++L ++ + + DT
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDT 595
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 129/299 (43%), Gaps = 37/299 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I YA A F M+ P P +L++L +N+ A L K
Sbjct: 528 FDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWE-ARKLLKKL 586
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H + +T SYN ++ +G++ A LF +M + ++PD +Y ++ GL R+ ++
Sbjct: 587 HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL 646
Query: 253 NRAVDLLEDMLNKGFVP-DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A L ++ K + +++ YT ++ L + + + A L M+ KG + D++ N+
Sbjct: 647 VCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNS 706
Query: 312 VVLGFCREGRAIDACKVLED-----------------------------------MPSNG 336
+ G+ R G+ A ++ M +G
Sbjct: 707 ITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSG 766
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
PN ++Y +L+ GLC+ GM ++ K +++ I++ + + LI+ C + +D+
Sbjct: 767 FFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKV 825
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L V+PN ++NI++ + DI + L+N M G P+ +Y L+
Sbjct: 720 ASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLIL 779
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + +L+ + + D L++ L+ C L + L M+V +
Sbjct: 780 GLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSL 839
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V R + + + +M G +P Y T++ +C G A K
Sbjct: 840 DKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLK 899
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++ G S + A+++G GK++EA +L+ +L+ + P T+ ++ C
Sbjct: 900 DQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKK 959
Query: 425 EEMEK 429
+ ++
Sbjct: 960 DNFKE 964
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 15/292 (5%)
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+K YA NL + F C L L L A + + G
Sbjct: 475 MKFYAAMNLNGQNAD------NFTCNSLVASL--------CENGKLVEAEEFLHHISRIG 520
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++PN+ +++ ++ + GD S A+++F++M G P +Y L++ LC+ A
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL+ + DT+SY TL+ + + L EA +L M PD Y ++ G
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640
Query: 317 CREGRAIDACKVLEDMPSNGCLP-NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
REGR + A L + L N + Y + GL G A + M KG S
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++ G+ +GKV A ++ + P+ T+ +++ G+++
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDI 752
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 123/270 (45%), Gaps = 19/270 (7%)
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
KIY E +P+ + F +++ +CK + + E A + + + +G
Sbjct: 445 KIYREGFVPNNVI--FSTLIYNSCK-----VGNVYE-----------AMKFYAAMNLNGQ 486
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ + N ++ + C NG + A + + G++P+ ++ ++ G + A
Sbjct: 487 NADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFS 546
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ + M++ G P +Y +LL LC+ + EA KLL ++ D + YNT+++
Sbjct: 547 VFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEIS 606
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM-QLMISKGFSPHF 376
+ G ++A ++ E+M N LP+ +Y ++ GL +G A ++ +LM + + +
Sbjct: 607 KSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNS 666
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAG 406
V I G G+ A + +E+ + G
Sbjct: 667 IVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 36/284 (12%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L+ + G PN +Y+ ++ C +G + + + D ++ +L++
Sbjct: 756 FKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRK 815
Query: 246 LCRKSQVNRAVDL-----------------------------------LEDMLNKGFVPD 270
C + +++ +DL + +ML KGF+P
Sbjct: 816 CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+ Y T++ +CR ++ A+KL +M G + D +V G G+ +A +L+
Sbjct: 876 SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M +P ++ TL+ C + F A LM + LI C G
Sbjct: 936 RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
V A EE+ + G P+ T+ ++V I + + GE++
Sbjct: 996 DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSR-GEIV 1038
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 187 DLFKSAHKHGVLP-------NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
D FK AH +L + +YN+++ A C NGD+ A + ++ ++G++P++ +Y
Sbjct: 960 DNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTY 1019
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
R+L+ + K V+R +L+D+ ++G V L
Sbjct: 1020 RVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYL 1052
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 181/395 (45%), Gaps = 2/395 (0%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ S ++ ++ + P A IF+ + + + TY L+ L R K F I ++
Sbjct: 13 VRSRTKLMNVLIGKGKPREAHSIFN-SLMDEGHKPTLITYTTLVAALTRQKLFKSILRLI 71
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++ LF +I ++ES A+K FR M E CKP N +++ +
Sbjct: 72 SKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGY-GN 130
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
A L + GV PN ++YNI++RA+C ++ A+ + KM G+ PD +
Sbjct: 131 AGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVT 190
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L + K + RA +++ +MLN+ P+ + + ++N C++ + +A + + RMK
Sbjct: 191 YNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMK 250
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P++ +N+++ GF +VL M NG P++V++ T++ G D
Sbjct: 251 ELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMD 310
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
K+ M+ P L KG+ G+ ++A +L + K G P+ ++
Sbjct: 311 KCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVI 370
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C+ +ME +V ++ ++ + + + E I
Sbjct: 371 SGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLI 405
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P TY L + YAE RA + ML P + + I+ N + +
Sbjct: 186 PDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRF 245
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F+ + GVLPN +N +++ F D + M E GV PDV ++ +M
Sbjct: 246 VFR-MKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWS 304
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++++ ++ DM+ PD +++ L R + +A +L M+ G +P++V
Sbjct: 305 SAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVV 364
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
TV+ G+C G+ A KV E M G PNL +Y TL+ G + A++ +Q+M
Sbjct: 365 ICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVM 424
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEA 395
KG P + + +G + E+
Sbjct: 425 EEKGVFPKKGTMQLIADAWRAIGLLSES 452
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P FTY +I + + D AL+ F M + C+P + ++ L + A
Sbjct: 416 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD-SGRVNEA 474
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL + HG+LP + + A C G A+ LF M +G P+V +Y L+ G
Sbjct: 475 FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 534
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + A+ L M G P+T++Y L+N L ++++ A+ +L M G +
Sbjct: 535 LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTN 594
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G+C G A V+ +M G NLV+Y T++ G CD G A + +
Sbjct: 595 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 654
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
LM G P LI GFC + K++ A G+ E++ G P+E T+ ++ C E
Sbjct: 655 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 714
Query: 426 EMEKLGEVLNEI 437
+++ +L +
Sbjct: 715 KLDTATSLLEHM 726
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY LI S L A+ F M P N ++ +LV +R ++ AF
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR-IKYAFV 581
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ ++G+ N +YN M++ +C GD A + N M +RG ++ +Y +++G C
Sbjct: 582 VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 641
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
A+ +L+ M + G PD SYT L+ C+ K+ A+ L M G P+ V
Sbjct: 642 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 701
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G+C++ + A +LE M +GC PN+ +Y L+ GL Q F A++ ++M
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
I +G P+ A+I G C G A + ++++ G P+ T+ ++ + G+E
Sbjct: 762 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL--GQE- 818
Query: 428 EKLGEVLNEIVKVEIKG 444
K+ E N ++E G
Sbjct: 819 GKVEEAENLFAELERHG 835
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 153/354 (43%), Gaps = 7/354 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESN 144
Q R Y L++ L R + + D + SE V P+L Y I A + N
Sbjct: 343 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE--GVQPNLLIYNAVINALCKDGN 400
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ D A + + E P ++ L ++ L A +F K G PNT +Y
Sbjct: 401 VAD-AETIMKKVFESEMSPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 458
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ ++ C +G ++ A+ L +M G++P + + LC A L DM N
Sbjct: 459 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 518
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P+ +YT L++ LC L+ A L RM G P+ V YN ++ R
Sbjct: 519 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 578
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A VL M NG N+V+Y ++ G C G A M M+ +G S + + +IK
Sbjct: 579 AFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 638
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G+C+ G A +L+ + G P E ++ ++ C +ME + NE+V
Sbjct: 639 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ +L TY +IK Y +S AL+ M + CKP ++ + + AF
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI-CGFCKISKMESAF 685
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF G+ PN +Y ++ +C + + A +L M G P+V++Y +L+ GL
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+++ + A +L + M+ +G P+ ++YT +++ LC+ A ++ +M +GC P++
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y++++ +EG+ +A + ++ +G +P+ ++Y ++ G + A ++
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865
Query: 367 MISKGFSPHFSVSHALIKGFCN 388
MI G P LIKG N
Sbjct: 866 MIKAGCQPTLWTYGVLIKGLKN 887
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 33/318 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y + D A M C+P + N ++ L T +N A +L K
Sbjct: 703 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL-TKQNNFSGAEELCKVM 761
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN +Y M+ C NG S+A +FNKM E+G +P++ +Y L++ L ++ +V
Sbjct: 762 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 821
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L ++ G +PD ++Y ++ + K+ A+ L RM GC P + Y +
Sbjct: 822 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 881
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNL-VSYRT------------------------- 346
+ G E D + L +P +PN Y+T
Sbjct: 882 IKGLKNEYLLAD--QRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937
Query: 347 --LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LV L G + A + + MIS+G P ++L+ V VD A GV + +
Sbjct: 938 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997
Query: 405 AGEAPHEDTWVMIVPQIC 422
G H + + ++ +C
Sbjct: 998 QGCEVHLNGYKELICALC 1015
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + + + G+ + +Y L+ L R +D ML++G P+ L Y ++N+L
Sbjct: 336 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + +A ++ ++ +PD Y +++LG CR+ A +V M GC PN
Sbjct: 396 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 455
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y TL+ GLCD G + A ++ MI G P I C++G ++A + +
Sbjct: 456 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 515
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ G P+ T+ ++ +C
Sbjct: 516 MKNKGCEPNVYTYTALISGLC 536
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 139/333 (41%), Gaps = 29/333 (8%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESN 144
++ R + TY +LI L + FS +++ + E + P++ TY +I ++
Sbjct: 727 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE--GIFPNVVTYTAMIDGLCKNG 784
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
AL+ F M+E C P + ++ L + A +LF +HG++P+ +Y
Sbjct: 785 STSLALEMFNKMIEQGCLPNLLTYSSLIRAL-GQEGKVEEAENLFAELERHGLIPDEITY 843
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV--NRAVDLLEDM 262
M+ A+ +G + A+ +M + G P + +Y +L++GL + + R L + +
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 903
Query: 263 LNKGFVPDTLSY----------------------TTLLNSLCRKKKLREAYKLLCRMKVK 300
N F T L+++L + EA +LL M +
Sbjct: 904 PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 963
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD YN+++ R A V + M + GC +L Y+ L+ LC A
Sbjct: 964 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 1023
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ + M+ + ++P V LI G G D
Sbjct: 1024 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 1056
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ S K+ + L + G + Y+ +++ R G M S G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PNL+ Y ++ LC G A+ M+ + SP ++I G C +D A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
V ++ K G P+ T+ ++ +C + + +++ E++
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 482
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 116/301 (38%), Gaps = 36/301 (11%)
Query: 77 LAKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
LA E+F+ Q PN TY LI LG+ +++ L E + + P
Sbjct: 788 LALEMFNKMIEQGCLPNLL----TYSSLIRALGQEGKVEEAENLFAEL--ERHGLIPDEI 841
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE------LLVTHRNYLRP- 184
TY +I+ Y S + A M++ C+P +++ LL R P
Sbjct: 842 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 901
Query: 185 -----AFDLFKSAHKHGVLP------------NTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+F +++ + V + + N ++ G A L M
Sbjct: 902 VVPNCSFG-YQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 960
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+G+ PD E+Y L+ L R V+ A+ + + M +G Y L+ +LC+ +
Sbjct: 961 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 1020
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+EA M ++ NPD V ++ G R+G + L M + +P+ Y L
Sbjct: 1021 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080
Query: 348 V 348
Sbjct: 1081 A 1081
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 186/437 (42%), Gaps = 76/437 (17%)
Query: 61 SPCRVQKLIASQSDPLLAKEIF---DYASRQPN--FRHSNSTYLILILKLGRAKYFSLID 115
S R+ L+ ++DP A ++F D S P FR+S Y I+I KLG +K F +D
Sbjct: 8 SSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELD 67
Query: 116 DILITLKSEHYPV-TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK-------- 166
+L+ LK++ V T +F +I + LP RAL F M ++ C+ K
Sbjct: 68 QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSA 127
Query: 167 -----QLNRILELLVTHRNYLRP--------------------AFDLFKSAHKHGVLPNT 201
+L ++ E L + + +P A LF K V P
Sbjct: 128 LLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTG 187
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++ ++ C + + A + + M + GV P V Y L++ LC+ +++ A L +
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKD 247
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+ D Y+TL++SL + + E +L M KGC PD V YN ++ GFC E
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 321 RAIDACKVL-----------------------------------EDMPSNGCLPNLVSYR 345
+ A +VL EDMP GC P+ +SYR
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ GLC+ F+ A + M+ KG+ P ++ C GK++ V+ L +
Sbjct: 368 IVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR- 426
Query: 406 GEAPHEDTWVMIVPQIC 422
G A D W +++P +C
Sbjct: 427 GIAGDADVWSVMIPTMC 443
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 19/388 (4%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDIL-------ITLKS---- 123
LA + + +QP +H Y + L +A+ + IL I KS
Sbjct: 843 LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGA 902
Query: 124 --EHYPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ YP+ PS+F LI++Y + + D A++TF + KP N IL +V
Sbjct: 903 LMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKD 962
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + LF+ G+ PN ++NI++ C G++ A L +M E G +P + +
Sbjct: 963 KR-TELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 1021
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ C+K + A++L++ M+ KG D +Y +++LC + +AY LL +M+
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ +P+ V YNT++ GF +EG+ A +V +M PN V+Y L+GG C G F+
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M + G + L+ G C K + A +LE + + +++
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C +++ +++ + K + D
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 1/291 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T L+ +++ P A F M++ P N I++ + R + A D F +
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS-CSRRGQMMKANDFFST 1535
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV PN +YNI++ F + +L++ M G+ PD ++ L+ GL +
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ V LL M+ +G + D ++ L+N K+R+A+ L+ M G PD YN
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ G ++ ++ VL +M NG +P Y TL+ G+C G A K M + G
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 1715
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
F H A+++G + GK ++A VL+ +L+ P T+ ++ + C
Sbjct: 1716 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1766
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 14/315 (4%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NRILELLVT- 177
E P++ TY L+ Y + A++ M+ CK + + N ++ L T
Sbjct: 1011 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI---CKGIEADVCTYNVFIDNLCTN 1067
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
HR+ A+ L K K + PN +YN ++ F G I +A +FN+M + + P+
Sbjct: 1068 HRS--AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 1125
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ G C A+ LL+ M G + ++Y TLLN LC+ +K A +LL RM
Sbjct: 1126 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 1185
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+V + Y ++ G C+ G +A +++ +M +G P++++Y +L+ G C G
Sbjct: 1186 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 1245
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
AK+ + M G + + LI FC G V EA V + G T ++
Sbjct: 1246 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVL 1305
Query: 418 VPQICAGEEMEKLGE 432
V +C KLGE
Sbjct: 1306 VSSLCRD---GKLGE 1317
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+ TY LI + + A + F M +F+ P N ++ H A
Sbjct: 1085 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC-HVGDFEEA 1143
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G+ N +Y ++ C + +A L +M ++ +Y +L+ G
Sbjct: 1144 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 1203
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ AV L+ +M G PD ++Y++L+N CR ++ A +++CRM G +
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+T++ FC+ G +A KV M NG + + LV LC G A+K++
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P+ +I G+ ++G A ++++K G+ P T+ ++ +C G
Sbjct: 1324 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 1383
Query: 426 EMEKLGEVLNEI 437
+ + + LN +
Sbjct: 1384 NLVEAKKFLNRL 1395
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y +++ C NG + A L M++ GV PDV +Y L+ G CR + A +++ M
Sbjct: 1196 AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 1255
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G V + + Y+TL+ + C+ + EA K+ M G D N +V CR+G+
Sbjct: 1256 YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 1315
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A K L M G +PN ++Y ++ G G A + MI G P F +L
Sbjct: 1316 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 1375
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+KG C G + EA L L A + ++ + C + + + +++V+ +
Sbjct: 1376 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 1435
Query: 443 KGDT 446
D+
Sbjct: 1436 LPDS 1439
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G L + ++NI++ + +G + A+ L N M GV PD ++Y + GL +KS +
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 1669
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +ML G +P Y TL+N +CR ++ A+KL M+ G V + +V G
Sbjct: 1670 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 1729
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
G+ DA VL+ M LP + ++ TL+ C A K +M G
Sbjct: 1730 LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLD 1789
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM---EKLGE 432
+ LI G C G A + EE+ P+ T+ ++V I A + EKL
Sbjct: 1790 VVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLT 1849
Query: 433 VLNEIVKVEIKGDTR 447
L E + G T+
Sbjct: 1850 DLQERGLISWGGSTQ 1864
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++PN+ +Y+ ++ + GD A++ F+ M + G P +Y L++GLC+ + A
Sbjct: 1329 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 1388
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L + D++ Y TLL C+ L EA L +M PD Y++++ G
Sbjct: 1389 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 1448
Query: 316 FCREGRAIDA-CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
CR+G+A+ A C M PN V Y LV GL G A + + M+ KG P
Sbjct: 1449 LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 1508
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+A+I ++C +++KA + W + P +
Sbjct: 1509 DTVAFNAII----------DSCSRRGQMMKANDFFSTMRWWGVCPNL 1545
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 1/255 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LIL L ++ L +L + E F LI Y+ES +A M
Sbjct: 1582 TFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFM 1641
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
P N I L ++ R + + ++GV+P Y ++ C GD
Sbjct: 1642 NTLGVFPDRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A+ L ++M G + +++GL + A+ +L+ ML +P ++TT
Sbjct: 1701 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1760
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ CR K+ EA KL M++ G D+V YN +++G C G + A ++ E+M
Sbjct: 1761 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820
Query: 337 CLPNLVSYRTLVGGL 351
PN+ +Y LV +
Sbjct: 1821 LCPNITTYAVLVDAI 1835
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 155/386 (40%), Gaps = 23/386 (5%)
Query: 70 ASQSDPLLAKEIFD---YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
S DPL A FD + P+F S +LK G K +L++ + +
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGS-----LLK-GLCKGGNLVEAKKFLNRLHYI 1398
Query: 127 P--VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P V ++ L+ +S A+ F M++ N P + +L L +
Sbjct: 1399 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC-RKGKAVT 1457
Query: 185 AFDLFKSAHKHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF +A G L PN Y ++ G A+ F +M ++G PD ++ ++
Sbjct: 1458 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 1517
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
R+ Q+ +A D M G P+ +Y LL+ +K+ L L M +G
Sbjct: 1518 DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 1577
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD + +++++LG + G K+L M G L + ++ L+ + G A
Sbjct: 1578 PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 1637
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC- 422
+ M + G P + + G E+ VL E+L+ G P ++ ++ +C
Sbjct: 1638 VNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCR 1697
Query: 423 ---------AGEEMEKLGEVLNEIVK 439
+EME LG +E+ +
Sbjct: 1698 VGDIQGAFKLKDEMEALGFGSHEVAE 1723
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 153/387 (39%), Gaps = 45/387 (11%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
IG C V D A + D+ R + TY L+ L + + F L +L
Sbjct: 1131 IGGHCHV-------GDFEEALRLLDHM-EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 1182
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++ V +T LI ++ + D A++ +M + P + ++
Sbjct: 1183 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 1242
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N ++ A ++ ++ G++ N Y+ ++ FC +G+++ A ++ M G D +
Sbjct: 1243 GN-IKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 1301
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT----------------------- 275
+L+ LCR ++ A L M G VP++++Y
Sbjct: 1302 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 1361
Query: 276 ------------TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+LL LC+ L EA K L R+ D V YNT++ C+ G
Sbjct: 1362 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 1421
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPHFSVSHAL 382
+A + + M N LP+ +Y +L+ GLC +G A + +G P+ + L
Sbjct: 1422 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 1481
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAP 409
+ G G A EE++K G P
Sbjct: 1482 VDGLSKAGHPKAAFYFFEEMMKKGTCP 1508
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ ++ ++ AV+ E + GF P + +L S+ + K+ + L M
Sbjct: 917 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG P++ +N ++ G C EG A +L+ M NG +P +V+Y TL+ C +G +
Sbjct: 977 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + MI KG + I C + +A +L+++ K +P+E T+ ++
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ +V NE+ K ++ + A IG
Sbjct: 1097 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 1132
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 4/332 (1%)
Query: 110 YFSLIDDILITL-KSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+F+ +D+ L T + H PS F L+ A++ L R M F P
Sbjct: 22 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 81
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
L ++ L H N + AF K G P+ ++ ++R C G I A LF+K
Sbjct: 82 TLAIVINSLC-HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G P+V +Y L+ GLC+ QV A ++ +M+ KG P+ ++Y +L++ LC+ +
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ L+ M PD+ NTVV C+EG +A V++ M G PN+V+Y
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C + DVA K M+ K + + LI G+C + VD+A + EE+ +
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P+ T+ ++ +C ++ + +E+V
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 352
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D AL TF ML P NR+L + +++ L + G+ P+ +
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH-STLLSLSRQMDSFGIPPDVYT 82
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
I++ + C + A++ K+ + G PD ++ L++GLC + ++ A+ L + M+
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+GF P+ ++Y TL+N LC+ +++ EA+ + M KG +P+IV YN+++ G C+
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++ +M + +P++ + T+V LC +GM A + +MI +G P+ +AL+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G C +VD A V + ++ + ++ ++ C + ++K + E+ + E+
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322
Query: 444 GDT 446
+T
Sbjct: 323 PNT 325
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 167/350 (47%), Gaps = 5/350 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLE 158
L+ + + K+ S + + ++ + + + + P ++T I I + +L D A +L+
Sbjct: 51 LLTSIAKTKHHSTL--LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILK 108
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P ++ L + A LF G PN +Y ++ C + ++
Sbjct: 109 LGHQPDATTFTTLIRGLCV-EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A+ +F++M +G+ P++ +Y L+ GLC+ + L+ +M++ +PD + T++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++LC++ + EA+ ++ M +G P++V YN ++ G C A KV + M C+
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
N++SY TL+ G C D A + M + +P+ + LI G C+VG++ +A +
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
E++ G+ P T+ + +C ++K +L I D +I
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 23/332 (6%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D AL +F ML + P ++L + ++Y L G+ P+ +
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHY-STVLSLSTQMDSFGIPPDVYT 618
Query: 204 YNIMMRAFC-------------------FNGDISIAYTLFN---KMFERGVMPDVESYRI 241
NI++ +FC F D+ TL N KM +G+ PD+ +Y
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNS 678
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC + LL +M+N +P+ + ++T++++LC++ + A+ ++ M +G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y ++ G C +A KV + M GC+PN+ SY L+ G C D A
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M +G + LI G C+VG++ A + E++ +G+ P T+ +++ +
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 858
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C + + +L I + D + I
Sbjct: 859 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 890
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 123/226 (54%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++PN ++ ++ A C G I+IA+ + + M +RGV PDV +Y LM G C +S+++ AV
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 763
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ + M++KG VP+ SY L+N C+ +++ +A LL +M ++G D V YNT++ G
Sbjct: 764 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR A + +M ++G +P+LV+YR L+ LC A ++ +
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 883
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
V + I G C G+++ A + L G P T+ +++ +C
Sbjct: 884 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLC 929
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 130/243 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++P+ + N ++ A C G ++ A+ + + M RGV P+V +Y LM G C +++V+ AV
Sbjct: 216 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ + M++K V + +SY TL+N C+ + + +A L M + P+ V YNT++ G
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR DA + +M + G +P+LV+YRTL LC D A ++ + + P
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 395
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ ++ G C G++++A + L G P+ T+ +++ +C + + ++ +E
Sbjct: 396 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 455
Query: 437 IVK 439
+ K
Sbjct: 456 MNK 458
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 3/330 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKT--FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY I+ L + T M++ P LN +++ L + A
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK-EGMVAEA 239
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ GV PN +YN +M C ++ +A +F+ M + + +V SY L+ G
Sbjct: 240 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 299
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V++A+ L E+M + P+T++Y TL++ LC +L++A L M +G PD
Sbjct: 300 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y T+ C+ A +L+ + + P++ Y T++ G+C G + A+
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P+ + +I G C G + EA + E+ K G +P++ T+ +I
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
E + E+L E++ D +G+
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGM 509
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
LK H P + FT LI+ AL F M+ +P ++ L R
Sbjct: 107 LKLGHQP-DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQ 165
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ AF++F G+ PN +YN ++ C + TL N+M + +MPDV +
Sbjct: 166 -VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 224
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ LC++ V A D+++ M+++G P+ ++Y L++ C + ++ A K+ M K
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C +++ YNT++ G+C+ A + E+M PN V+Y TL+ GLC G A
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
M+++G P L C +D+A +L+ + + P + I+
Sbjct: 345 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404
Query: 421 ICAGEEMEKLGEVLNEI 437
+C E+E ++ + +
Sbjct: 405 MCRAGELEDARDLFSNL 421
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 15/270 (5%)
Query: 178 HRNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
H N L A F + H H P+T + ++ + S +L +M G+ PDV
Sbjct: 558 HFNTLDDALSSFNRMLHMHPP-PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 616
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+ IL+ C ++ A +L +L GF PD ++Y TL+N LC+
Sbjct: 617 YTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG-------------LCK 663
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M KG +PDI YN+++ C +L +M ++ +PN+V + T+V LC +GM
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+A + +MI +G P AL+ G C ++DEA V + ++ G P+ ++ +
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ C + M+K +L ++ + DT
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADT 813
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H V P++ TY L+ + N D A+K F +M+ +C N ++ ++ +
Sbjct: 248 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS-V 306
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A LF+ + + PNT +YN ++ C G + A +LF++M RG +PD+ +YR L
Sbjct: 307 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366
Query: 243 -----------------------------------MQGLCRKSQVNRAVDLLEDMLNKGF 267
+ G+CR ++ A DL ++ +KG
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ +Y +++ LC++ L EA KL M GC+P+ YN + GF R A+ +
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 486
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+LE+M + G ++ + LVG L D G+ K+ +
Sbjct: 487 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 3/220 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ + + D A+K F +M+ C P + N IL + A
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN-ILINGYCQIQRMDKA 797
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G++ +T +YN ++ C G + A LF++M G +PD+ +YRIL+
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + A+ LL+ + D L Y ++ +CR +L A L + KG PD
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+ YN ++ G C+ G +A K+ M N N S R
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSR 957
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 61/335 (18%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNY------- 181
SLF ++ A +PD L T+R++ ++ CK + L++ + LL + N+
Sbjct: 346 SLFHEMV---ARGQIPD--LVTYRTLSDYLCKN--RHLDKAMALLKAIEGSNWDPDIQIY 398
Query: 182 ------------LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
L A DLF + G+ PN +YNIM+ C G ++ A LF++M +
Sbjct: 399 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G P+ +Y ++ +G R ++ R ++LLE+ML +GF D +S TTLL + L +
Sbjct: 459 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGLDQ 517
Query: 290 AYK-LLCR---------MKVKGCNPDIV------------HYNTVVLGFCREGRAIDACK 327
+ K +LC+ +++ P + H+NT+ DA
Sbjct: 518 SVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLD----------DALS 567
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
M P+ V + L+ + + M S G P + LI FC
Sbjct: 568 SFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 627
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ ++ A VL +LLK G P T+ ++ +C
Sbjct: 628 HLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC 662
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 167/333 (50%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N+ H STY+ LI L +Y + I +++ VTP+ + +++
Sbjct: 75 QFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVR 134
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P+ + N ++ +++ H L+ G
Sbjct: 135 MLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMI-IMLMHEGQYEKVHQLYNEMSTEGHC 193
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M E G+ P + Y +L+ + + + A+
Sbjct: 194 FPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALS 253
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M ++ PD +YT L+ L + ++ EAY C M+ +GC PD V N ++
Sbjct: 254 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLG 313
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ ++M + C+P++V+Y T++ L + + + + M G SP
Sbjct: 314 KAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS 373
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC ++++A +LEE+ + G P
Sbjct: 374 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 406
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 157/341 (46%), Gaps = 9/341 (2%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P +FTY LI+ ++ D A F M C+P +N ++ L L
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL-GKAGRL 318
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A LF+ +P+ +YN +++A F S + F +M E G+ P +Y I
Sbjct: 319 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 378
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +++ +A+ LLE+M KGF P +Y +L+++L + K+ A +L +K
Sbjct: 379 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 438
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y ++ + GR DA + ++M GC P++ +Y L+ GL GM D A
Sbjct: 439 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 498
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ M G P + + ++ G G A +L + ++ P ++ ++ +
Sbjct: 499 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 558
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD----TRIVEAGIGLEDY 458
E+ +++ E+ + + D + I+EA IG D+
Sbjct: 559 SHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA-IGKVDH 598
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 13/256 (5%)
Query: 30 IFCYSSSSQESPSSPEQQQESSISNSKSP----IGSPCRVQKLIASQSDPLLAKEIFDYA 85
+F S + E PS E+ +ES IS S I C+ ++ + +L +E+
Sbjct: 347 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRM---EKAMMLLEEM---- 399
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+ F + Y LI LG+AK + L ++ LK + ++ +IK ++
Sbjct: 400 -DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 458
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ F M + C P N ++ L L A + +HG +P+ SYN
Sbjct: 459 LDDAINMFDEMNKLGCAPDVYAYNALMSGL-ARTGMLDEALSTMRRMQEHGCIPDINSYN 517
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ G A + + M + V PDV SY ++ L A L+++M
Sbjct: 518 IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTL 577
Query: 266 GFVPDTLSYTTLLNSL 281
GF D ++Y+++L ++
Sbjct: 578 GFEYDLITYSSILEAI 593
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
+L+ F S+ FN +P + N +L LV+ R A + K + PN S NI++
Sbjct: 152 SLRLFLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILL 211
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ GD+ A + ++M G++PDV +Y ++ C K + A L +D++ G
Sbjct: 212 KGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRR 271
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD YT L++ C + KL++A +++ M+ G P+ V Y+ V+ C+EG++I+AC +
Sbjct: 272 PDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDL 331
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M G +P+ +V LC G A + + M+ K P +V LI C
Sbjct: 332 TREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCK 391
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
G V EA G+ +EL + G P T+ ++ +C E+++ G V +++V+ + +
Sbjct: 392 NGMVQEARGLFDELER-GFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMT 450
Query: 449 VEAGI 453
EA I
Sbjct: 451 YEALI 455
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 21/318 (6%)
Query: 128 VTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP+L + L+K D ALK M + P +L + L A
Sbjct: 200 ITPNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCA-KGDLEGA 258
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF G P+ Y +++ +C G + A + ++M GV P+ +Y ++++
Sbjct: 259 QQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEA 318
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + A DL +ML G+VPDT +++ LC+ K EA ++ +M K PD
Sbjct: 319 CCKEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPD 378
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+T++ C+ G +A + +++ G +P+L++Y +L+ GLC+ G A +
Sbjct: 379 NTVVSTLIYWLCKNGMVQEARGLFDEL-ERGFVPSLLTYNSLIIGLCENGELQEAGRVWD 437
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP---------------- 409
M+ + + P+ ALIKGFC +GK +E + +E++ G P
Sbjct: 438 DMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSEPS 497
Query: 410 HEDT-WVMIVPQICAGEE 426
H+DT W ++ +G++
Sbjct: 498 HDDTVWTIVEAVALSGQD 515
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 166/350 (47%), Gaps = 8/350 (2%)
Query: 100 ILILKLGRAKY-FSLIDDILITLKSE--HYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+L+L L RA D L+ +S H P T S+ L + + D A K FRS
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRV-DLAEKAFRSA 182
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P N ++ L LR A D+ K G+ P+ +YN ++ +C G
Sbjct: 183 LRRRVSPDIYTFNTVISGLC-RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG 241
Query: 217 ISIAY---TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
Y L +M E G+ P ++ +L+ G C+ S AV + E+M +G ++
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +L++ LC + K+ E KL+ M+ G +P+ + + V+ GFC++G DA ++ M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
P++V Y L+ G G + A + M KG SP+ + + LI GF G
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
A G+L+E+ + G T+ +++ +C E+ K ++L+E+ +V ++
Sbjct: 422 SASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 159/362 (43%), Gaps = 12/362 (3%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLID 115
I CR+ +L + +AK+I + S +TY LI K G A +D
Sbjct: 198 ISGLCRIGQLRKAGD---VAKDIKAWG-----LAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + T F LI Y +++ A++ F M + N ++ L
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + L + G+ PN ++ +++ FC G ++ A + M ER V PD
Sbjct: 310 CSE-GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y IL+ G R ++ A+ + E M KG P+ +Y L+ R R A LL
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
MK KG D+V YN ++ C +G A K+L++M G PN ++Y T++ G CD+G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + M + + IK FC +GK+DEA +L E+L P+ T+
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548
Query: 416 MI 417
I
Sbjct: 549 TI 550
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 152/324 (46%), Gaps = 6/324 (1%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFN--CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
L+ A ++ P RA F E + +P +N +L LV + + A F+SA
Sbjct: 125 LVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKR-VDLAEKAFRSAL 183
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ V P+ ++N ++ C G + A + + G+ P V +Y L+ G C+K
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243
Query: 254 RA--VD-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
VD LL++M+ G P +++ L+N C+ A ++ MK +G +V YN
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ G C EG+ + K++E+M G PN +++ ++ G C +GM A ++ M +
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
P + LI G+ +GK+++A V E + K G +P+ T+ ++ +
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423
Query: 431 GEVLNEIVKVEIKGDTRIVEAGIG 454
+L+E+ + I+ D IG
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIG 447
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 158/347 (45%), Gaps = 8/347 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT-- 152
T+ +I L R D+ +K+ + + PS+ TY LI Y +
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKA--WGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250
Query: 153 -FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
+ M+E P ++ + N A +F+ + G+ + +YN ++
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSN-TAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G + L +M + G+ P+ ++ +++G C+K + A D ++ M + PD
Sbjct: 310 CSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+ YT L++ R K+ +A + M KG +P++ YN ++ GF R G A +L++
Sbjct: 370 VIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G ++V+Y L+G LC +G A K + M G P+ + +I+GFC+ G
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ A + + K + + T+ + + C +M++ ++LNE++
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 98/174 (56%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + ++ K G+ PN +YN ++ F +GD A L ++M E+G+ DV +Y +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC K +V +AV LL++M G P+ L+Y T++ C K ++ AY++ RM+
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++V YN + FC+ G+ +A +L +M +PN ++Y T+ G+ ++G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 1/206 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + A D + V P+ Y I++ + G + A + M ++G+ P+V +
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G R A LL++M KG D ++Y L+ +LC K ++R+A KLL M
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+ + YNT++ GFC +G A ++ M N+V+Y + C G D
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIK 384
A + M+ K P+ +++ IK
Sbjct: 527 EANDLLNEMLDKCLVPN-GITYETIK 551
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 166/378 (43%), Gaps = 36/378 (9%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
N Y ILI L + + + ++ + S + + P ++ Y I + ++ ++A F
Sbjct: 315 NVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFD 374
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ F P + ++E +N +R ++L K ++ + +Y ++ C +
Sbjct: 375 GMITFGVTPGARAYASLIEGFFREKN-VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSS 433
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
GD+ AY + +M G P+V Y L++ +KS+ AV +L++M +G PDT Y
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCY 493
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG------------------- 315
+L+ L + KK+ EA L M G PD Y + G
Sbjct: 494 NSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLE 553
Query: 316 ----------------FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+C++G+ I+AC M G L + +Y L+ GL G +
Sbjct: 554 CGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVND 613
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A++ M KG +P LI GF +G + +A + +E+++AG + + M++
Sbjct: 614 AEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLG 673
Query: 420 QICAGEEMEKLGEVLNEI 437
C E+EK E+L+E+
Sbjct: 674 GFCRSGEIEKAKELLDEM 691
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 9/302 (2%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LIK + + + A++ + M E P N ++ + ++ + A
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLI-IGLSKAKKMDEARSFLLE 515
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL----C 247
++G P+ +Y + + G+ + A +M E GV+P+ ++L GL C
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN----KVLCTGLINEYC 571
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+K +V A M+ +G + D +YT L+N L + K+ +A ++ M+ KG PD+
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T++ GF + G A + ++M G N++ Y L+GG C G + AK+ + M
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
KGF P+ +I G+C G + EA + +E+ G P + +V C ++
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 751
Query: 428 EK 429
E+
Sbjct: 752 ER 753
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 189 FKSAHKH-------GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
F SA K+ GV+PN ++ +C G + A + F M E+G++ D ++Y +
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM GL + +VN A ++ +M KG PD SY TL++ + +++A + M G
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+++ YN ++ GFCR G A ++L++M G PN V+Y T++ G C G A
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ M KG P V L+ G C + V+ A + E
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
HG + Y+ + G + A LF+ M GV P +Y L++G R+ V +
Sbjct: 344 HGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRK 403
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
+LL ++ + V +Y T + +C L AY ++ M GC P++V Y T++
Sbjct: 404 GYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIK 463
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
F ++ R DA +VL++M G P+ Y +L+ GL D A+ ++ M+ GF P
Sbjct: 464 TFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKP 523
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
A I G+ G+ A ++E+L+ G P++ ++ + C ++ +
Sbjct: 524 DAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAF 583
Query: 435 NEIVKVEIKGDTR 447
+V+ I GD +
Sbjct: 584 RSMVEQGILGDAK 596
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 41/317 (12%)
Query: 150 LKTFRSMLEFNCKPLPKQLNRIL-----ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++++ ++ +C+ QL + + E L T + A +L KS G++P+ +SY
Sbjct: 224 VQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSY 283
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N+++ C + A +L +M G+ D +Y IL+ GL + + A L+ +M++
Sbjct: 284 NLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVS 343
Query: 265 KGF-----------------------------------VPDTLSYTTLLNSLCRKKKLRE 289
GF P +Y +L+ R+K +R+
Sbjct: 344 HGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRK 403
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
Y+LL +K + Y T V G C G A ++++M ++GC PN+V Y TL+
Sbjct: 404 GYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIK 463
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ F A + ++ M +G +P ++LI G K+DEA L E+++ G P
Sbjct: 464 TFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKP 523
Query: 410 HEDTW-VMIVPQICAGE 425
T+ I I AGE
Sbjct: 524 DAFTYGAFISGYIEAGE 540
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 59/373 (15%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSM--LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
LF LI Y E D A+ F S L+ + P + N +L+ L+ RN L +D++
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALL-KRNRLDLFWDVY 212
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-------------------- 229
K + V+ + +SY +++ A C +G++ +A + K E
Sbjct: 213 KGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMS 272
Query: 230 -RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+G++P +SY +L+ GLC++ ++ A LL +M + G D ++Y+ L++ L + +
Sbjct: 273 CKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNAD 332
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP--------- 339
A L+ M G + D + Y+ + +EG A + + M + G P
Sbjct: 333 AANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLI 392
Query: 340 ----------------------NLV----SYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
N+V +Y T V G+C G D A ++ M + G
Sbjct: 393 EGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCR 452
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ + LIK F + +A VL+E+ + G AP + ++ + ++M++
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512
Query: 434 LNEIVKVEIKGDT 446
L E+V+ K D
Sbjct: 513 LLEMVENGFKPDA 525
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 5/241 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +F + G+ N YN+++ FC +G+I A L ++M +G P+ +Y
Sbjct: 646 MQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C+ + A L ++M KG VPD+ YTTL++ CR + A + KG
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKG 764
Query: 302 CNPDIVHYNTV---VLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMF 357
C +N + V F + D L D + PN V+Y ++ LC +G
Sbjct: 765 CASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNL 824
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ AK+ M P +L+ G+ +G+ E V +E++ AG P + +I
Sbjct: 825 EAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVI 884
Query: 418 V 418
+
Sbjct: 885 I 885
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 48/371 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +L+ L + + ++I ++ + + P +F+Y LI +++ +A F
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGK--GIAPDVFSYGTLIDGFSKLGNMQKASSIFD 654
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ N +L + A +L G PN +Y ++ +C +
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGF-CRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE-------------- 260
GD++ A+ LF++M +G++PD Y L+ G CR + V RA+ + E
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFN 773
Query: 261 ----------------DMLN--------KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
DM+N K P+ ++Y +++ LC++ L A +L
Sbjct: 774 ALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHH 833
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ P ++ Y +++ G+ + GR + V +++ + G P+ + Y ++ +GM
Sbjct: 834 MQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM 893
Query: 357 FDVAKKYMQLMISK-----GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
A + M +K G S AL+ GF VG+++ A V+E +++ P
Sbjct: 894 TTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDS 953
Query: 412 DTWVMIVPQIC 422
T + ++ + C
Sbjct: 954 STVIELINESC 964
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 36/296 (12%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGR-AKYFSLIDDILITLKSEHYPVTPSLF 133
AKE+ D S + F + TY +I K G A+ F L D++ + + P F
Sbjct: 684 AKELLDEMSGK-GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK------GLVPDSF 736
Query: 134 TYLIKIYAESNLPD--RALKTFRSMLEFNCK----PLPKQLNRIL-----ELLVTHRNYL 182
Y + L D RA+ F + E C P +N + EL N L
Sbjct: 737 VYTTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGKTELTTDMINRL 795
Query: 183 RP-AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+FD F PN +YNIM+ C G++ A LF+ M + +MP V +Y
Sbjct: 796 MDGSFDKFGK-------PNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTS 848
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK- 300
L+ G + + + + ++++ G PD + Y+ ++N+ ++ +A LL +M K
Sbjct: 849 LLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKN 908
Query: 301 ----GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
GC I ++ GF + G A KV+E+M +P+ + L+ C
Sbjct: 909 AVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD-----VESYR 240
F +F G+ P+ Y++++ AF G + A L ++MF + + D + + R
Sbjct: 863 FSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR 922
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
L+ G + ++ A ++E+M+ ++PD+ + L+N C R A
Sbjct: 923 ALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMA 972
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 61 SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP + +++ S+ LA F +A +Q F+H+ +Y +LI LG+ K F++I +++
Sbjct: 121 SPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVS 180
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+K + ++ F + + YA + A+++F M +F + NR+L+ L R
Sbjct: 181 DMKRKGI-LSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSR 239
Query: 180 NYLRPAFDLFKSAHKHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N ++ A ++F KHG P+ KSY I++ + + ++ ++ +M + G PDV +
Sbjct: 240 N-VKKAQEVFDKM-KHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVT 297
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ IL+ C+ + + A+ L +M K P + TL+N L +K+L+EA + ++K
Sbjct: 298 FGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLK 357
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ G P+ YN VV +C + A +++++M +G PN +Y ++ L
Sbjct: 358 LSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSK 417
Query: 359 VAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A Q M + G P S +I+ FCN +VD A + +E+ G P + +
Sbjct: 418 EAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTL 477
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIK 443
+ +C ++E E++ V I+
Sbjct: 478 INSLCHEHKLEDACTYFQEMLDVGIR 503
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
I+E+L N A F+ A K G T+SYN+++ A ++ + L + M
Sbjct: 125 IVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKR 184
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+G++ E++ ++ + R +V AV+ E M GF + LL++LC+ + +++
Sbjct: 185 KGILSR-ETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKK 243
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +MK PDI Y ++ G+ ++ + +V +M G P++V++ L+
Sbjct: 244 AQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILIN 303
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C +D A + M +K P V LI G + ++ EA E+L +G AP
Sbjct: 304 AHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAP 363
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
T+ +V C +M +++E+ K + ++R
Sbjct: 364 EAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSR 401
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
N + S + LI LG K + LK + + ++ Y S A
Sbjct: 325 NIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYA 384
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMM 208
+ M + P + + IL L+ R + A+ +F+ + G P +Y+IM+
Sbjct: 385 YRMVDEMRKSGVGPNSRTYDIILHHLIKGRKS-KEAYSVFQRMSREPGCEPTLSTYDIMI 443
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
R FC + +A ++++M +GV+P + + L+ LC + ++ A ++ML+ G
Sbjct: 444 RMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIR 503
Query: 269 PDTLSYTTLLNSL 281
P ++ L +L
Sbjct: 504 PPATMFSNLKQAL 516
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 164/312 (52%), Gaps = 8/312 (2%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL M+++ C+ +L + N A DLF+ + + + Y+I++
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNT-ALALDLFRKMEERSIKASVVQYSIVI 251
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C +G++ A +LFN+M +G+ DV +Y ++ GLC + + +L +M+ + +
Sbjct: 252 DSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNII 311
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++++ L++ ++ KL EA +L M +G PD + Y++++ GFC+E R +A ++
Sbjct: 312 PNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQM 371
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ M S GC PN+V+Y L+ C D + + SKG + L++GFC
Sbjct: 372 LDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK++ A + +E++ G P T+ +++ +C E++K E+ ++ K +R+
Sbjct: 432 SGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK------SRM 485
Query: 449 VEAGIGLEDYLI 460
+ GIG+ + +I
Sbjct: 486 I-LGIGIYNIII 496
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 5/304 (1%)
Query: 122 KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
K E + S+ Y I I + + NL D AL F M K + I+ L
Sbjct: 234 KMEERSIKASVVQYSIVIDSLCKDGNLDD-ALSLFNEMEMKGIKADVVAYSSIIGGLCND 292
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ A + + ++PN +++ ++ F G + A L+N+M RG+ PD +
Sbjct: 293 GRWDDGA-KMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTIT 351
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G C+++++ A +L+ M++KG P+ ++Y+ L+NS C+ K++ +L C +
Sbjct: 352 YSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG D V YNT+V GFC+ G+ A ++ ++M S G P++V+Y L+ GLCD G
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M + + +I G CN KVD+A + L G P T+ +++
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531
Query: 419 PQIC 422
+C
Sbjct: 532 GGLC 535
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + A K G PNT +++ ++ FC G +S A L ++M E P+V + L+
Sbjct: 123 AFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN 182
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC K +V A+ L++ M+ G + ++Y +LN +C+ A L +M+ +
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA 242
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y+ V+ C++G DA + +M G ++V+Y +++GGLC+ G +D K +
Sbjct: 243 SVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKML 302
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI + P+ ALI F GK+ EA + E++ G AP T+ ++ C
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362
Query: 425 EEMEKLGEVLNEIV 438
+ + ++L+ +V
Sbjct: 363 NRLGEANQMLDLMV 376
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 1/291 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D K R M+ N P + ++++ V L A +L+ G+ P+T +Y+
Sbjct: 296 DDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE-AKELYNEMVARGIAPDTITYSS 354
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC + A + + M +G P++ +Y IL+ C+ +V+ + L ++ +KG
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
V DT++Y TL+ C+ KL A +L M +G P +V Y ++ G C G A
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ E M + + + Y ++ G+C+ D A + KG P + +I G
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL 534
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C G + EA + ++ + G AP + T+ +++ G + E++ E+
Sbjct: 535 CKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEM 585
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 135/292 (46%), Gaps = 1/292 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ LI ++ + A + + M+ P + +++ N L A +
Sbjct: 317 FSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGF-CKENRLGEANQMLDLM 375
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN +Y+I++ ++C + LF ++ +G++ D +Y L+QG C+ ++
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A +L ++M+++G P ++Y LL+ LC +L++A ++ +M+ I YN +
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C + DA + + G P++++Y ++GGLC +G A + M G
Sbjct: 496 IHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+P + LI+ V + ++EE+ G A T M+V + G
Sbjct: 556 APSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDG 607
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY +R + ++ A LF M + +P + + L + R+ + + + ++M
Sbjct: 36 SYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEM 95
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G + + ++N CRK+KL A+ ++ R G P+ + ++T++ GFC EGR
Sbjct: 96 DLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRV 155
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A +++ M PN+V+ TL+ GLC +G A + M+ G + +
Sbjct: 156 SEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPV 215
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ C G A + ++ + + +++ +C ++ + NE+ I
Sbjct: 216 LNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGI 275
Query: 443 KGDTRIVEAGIG 454
K D + IG
Sbjct: 276 KADVVAYSSIIG 287
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 140/253 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F S K G+ P+ S+N +M + GD+ + L + M GV PDV +Y +L+
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLIN 214
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++S+++ A L ++ML+ G VP+ +++TTL++ C+ ++ A ++ +M + P
Sbjct: 215 GLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP 274
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A +Y
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI + ALI C G+ +A +L E+L G P T+ MI+ + C
Sbjct: 335 KRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKK 394
Query: 425 EEMEKLGEVLNEI 437
++ ++L E+
Sbjct: 395 GDVWTGSKLLKEM 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 1/325 (0%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+++ FR T +I L + KYF L+ YP + F L+ + +
Sbjct: 92 TKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGE 151
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
A F S+ ++ +P N ++ + + L F L GV P+ +Y+
Sbjct: 152 IXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGD-LDEGFRLKSVMQASGVQPDVYTYS 210
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+++ C + A LF++M + G++P+ ++ L+ G C+ +V+ A+++ ML++
Sbjct: 211 VLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+PD ++Y TL+ LC+K L++A L+ M +KG PD + Y T++ G C+EG A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + M + V+Y L+ LC +G A+K ++ M+S G P +I
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 386 FCNVGKVDEACGVLEELLKAGEAPH 410
FC G V +L+E+ + G P+
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYLPN 415
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 163/344 (47%), Gaps = 3/344 (0%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
I++ + G+ ++ IL T ++ + +F+ LI Y ES A++ +R E
Sbjct: 38 IVVSRKGKGSASAVFAAILETKGTQRSDI--YVFSGLITAYLESGFLRDAIECYRLTKEH 95
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+ +++E L+ + Y + + ++ + + G + +NI+M FC G+I +
Sbjct: 96 KFRVPFDTCRKVIEHLMKLK-YFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXL 154
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A ++F+ + + G+ P V S+ LM G + ++ L M G PD +Y+ L+N
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLIN 214
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC++ K+ +A L M G P+ V + T++ G C+ GR A ++ M S LP
Sbjct: 215 GLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP 274
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L++Y TL+ GLC +G A+ + M KG P LI G C G ++ A
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++K + + ++ +C ++L E++ V +K
Sbjct: 335 KRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLK 378
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + + E G + + ILM C+ ++ A + + + G P +S+ TL+
Sbjct: 119 LVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLM 178
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N + L E ++L M+ G PD+ Y+ ++ G C+E + DA + ++M NG +
Sbjct: 179 NGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLV 238
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C G D+A + + M+S+ P + LI G C G + +A +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++E+ G P + T+ ++ C ++E E ++K I+ D
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 35/191 (18%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF +G++PN ++ ++ C NG + +A ++ +M + ++PD+ +Y L+ GLC
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLC 287
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTL------------------------------ 277
+K + +A DL+++M KG PD ++YTTL
Sbjct: 288 KKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 278 -----LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LC++ + +A K+L M G P+I Y ++ FC++G K+L++M
Sbjct: 348 AYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 333 PSNGCLPNLVS 343
+G LPN+V+
Sbjct: 408 QRDGYLPNVVT 418
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRILMQ-------GLCRK--------SQVNRAVDLL 259
DI + L E G + D +E YR+ + CRK
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+ L G+ + L+++ C+ ++ A + + G P +V +NT++ G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKI 184
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ +Y L+ GLC + D A M+ G P+
Sbjct: 185 GDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTF 244
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + ++L P T+ ++ +C ++++ ++++E+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 440 VEIKGD 445
+K D
Sbjct: 305 KGLKPD 310
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 184/417 (44%), Gaps = 65/417 (15%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDIL--ITLKSEHYPVTP----------------SL 132
FRH+ +Y IL+ L A+ + ++IL + L S P + +
Sbjct: 5 FRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGV 64
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L + E + + A + F M +F P + N L L + + D F+
Sbjct: 65 FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRL-SKAGEGDLSRDFFRDM 123
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P +YNIM+ C GD+ A +LF +M + G+ PD+ +Y L+ G + +
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLL 183
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ +V L E+M G PD ++Y L+NS C+ K + A++ MK K P+++ Y+T+
Sbjct: 184 DESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTL 243
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLP--------------------------------- 339
+ C+EG A K DM G LP
Sbjct: 244 IDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHV 303
Query: 340 --NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
N+V+Y TL+ GLC++GM + A++ + M G +P+ ALI G V +D+A
Sbjct: 304 DLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAME 363
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ E+ + P W IV +C+ ++E+ +I+ E+K E+GIG
Sbjct: 364 LFNEMREKDIKPDILLWGTIVWGLCSESKLEEC-----KIIMTEMK------ESGIG 409
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 3/297 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP + TY LI Y + L D ++ F M C+P N ++ + LR A
Sbjct: 163 LTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLR-A 221
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F+ F+ + PN SY+ ++ A C G + +A F M G++P+ +Y L+
Sbjct: 222 FEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA 281
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + A L ++ML + + ++YTTLL+ LC + + EA +L M G P+
Sbjct: 282 NCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ G + A ++ +M P+++ + T+V GLC + + K M
Sbjct: 342 LQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMT 401
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G + + L+ + G EA +LEE+ G T+ ++ +C
Sbjct: 402 EMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLC 458
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY-P 127
+ + D L A+ +F+ ++ TY LI G+ L+D+ + + +
Sbjct: 142 VCKEGDMLTARSLFE-QMKKMGLTPDIVTYNTLIDGYGK---IGLLDESVCLFEEMKFMG 197
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
P + TY LI + + RA + FR M + + KP + +++ L ++ A
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALC-KEGMMQMA 256
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F + G+LPN +Y+ ++ A C G++ A+ L ++M + V ++ +Y L+ G
Sbjct: 257 IKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDG 316
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + +N A +L M G P+ +YT L++ + + + +A +L M+ K PD
Sbjct: 317 LCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376
Query: 306 IVHYNTVVLGFCRE-----------------------------------GRAIDACKVLE 330
I+ + T+V G C E G +A +LE
Sbjct: 377 ILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLE 436
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G +V++ L+ GLC +G+ A Y M P+ +V ALI G C
Sbjct: 437 EMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNN 496
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +A + +E+ P + + ++
Sbjct: 497 CIGDAKKLFDEMQDKNMIPDKIAYTAMI 524
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 3/281 (1%)
Query: 128 VTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP+L +T LI + + D+A++ F M E + KP I+ L + L
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESK-LEEC 396
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + G+ N Y +M A+ G+ + A L +M + G V ++ L+ G
Sbjct: 397 KIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDG 456
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ V A+ M + P+ YT L++ LC+ + +A KL M+ K PD
Sbjct: 457 LCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPD 516
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ G + G +A + M G +L +Y +LV GL G A+K++
Sbjct: 517 KIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLA 576
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
MI KG P ++ L++ +G +DEA + EL++ G
Sbjct: 577 EMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 131/307 (42%), Gaps = 7/307 (2%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
LG A F L D++L EH + +T L+ E + + A + FR+M + P
Sbjct: 288 LGEA--FMLADEML----QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
+ ++ + R+ + A +LF + + P+ + ++ C + +
Sbjct: 342 LQAYTALIHGHIKVRS-MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+M E G+ + Y LM + A++LLE+M + G +++ L++ LC++
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
++EA RM P++ Y ++ G C+ DA K+ ++M +P+ ++Y
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAY 520
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
++ G G F A M+ G +L+ G G+V +A L E++
Sbjct: 521 TAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIG 580
Query: 405 AGEAPHE 411
G P E
Sbjct: 581 KGIIPDE 587
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 61 SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP + +++ S+ LA F +A +Q F+H+ +Y +LI LG+ K F++I +++
Sbjct: 121 SPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVS 180
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+K + ++ F + + YA + A+++F M +F + NR+L+ L R
Sbjct: 181 DMKRKGI-LSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSR 239
Query: 180 NYLRPAFDLFKSAHKHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N ++ A ++F KHG P+ KSY I++ + + ++ ++ +M + G PDV +
Sbjct: 240 N-VKKAQEVFDKM-KHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVT 297
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ IL+ C+ + + A+ L +M K P + TL+N L +K+L+EA + ++K
Sbjct: 298 FGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLK 357
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ G P+ YN VV +C + A +++++M +G PN +Y ++ L
Sbjct: 358 LSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSK 417
Query: 359 VAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A Q M + G P S +I+ FCN +VD A + +E+ G P + +
Sbjct: 418 EAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTL 477
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIK 443
+ +C ++E E++ V I+
Sbjct: 478 INSLCHEHKLEDACTYFQEMLDVGIR 503
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
I+E+L N A F+ A K G T+SYN+++ A ++ + L + M
Sbjct: 125 IVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKR 184
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+G++ E++ ++ + R +V AV+ E M GF + LL++LC+ + +++
Sbjct: 185 KGILSR-ETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKK 243
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +MK PDI Y ++ G+ ++ + +V +M G P++V++ L+
Sbjct: 244 AQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILIN 303
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C +D A + M +K P V LI G + ++ EA E+L +G AP
Sbjct: 304 AHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAP 363
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
T+ +V C +M +++E+ K + ++R
Sbjct: 364 EAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSR 401
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
N + S + LI LG K + LK + + ++ Y S A
Sbjct: 325 NIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYA 384
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMM 208
+ M + P + + IL L+ R + A+ +F+ + G P +Y+IM+
Sbjct: 385 YRMVDEMRKSGVGPNSRTYDIILHHLIKGRKS-KEAYSVFQRMSREPGCEPTLSTYDIMI 443
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
R FC + +A ++++M +GV+P + + L+ LC + ++ A ++ML+ G
Sbjct: 444 RMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIR 503
Query: 269 PDTLSYTTLLNSL 281
P ++ L +L
Sbjct: 504 PPATMFSNLKQAL 516
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 165/341 (48%), Gaps = 1/341 (0%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+D+IL ++ E + + ++ LI+ Y+ S + A K F M E N + + ++
Sbjct: 271 VDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMIS 330
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
N ++ AF LF + ++PN +Y ++ C G + A L +M +GV
Sbjct: 331 WSRRLGN-MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVD 389
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
++ + M G CR+ +++ A+ L M KG D +Y L N LC+ + EA +
Sbjct: 390 LNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCI 449
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M KG P++V + + +C+EG +A ++ DM G +PN+++Y TL+ C
Sbjct: 450 LNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCK 509
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ A K MI+KG P +LI G C VG+VDEA + E+ G + T
Sbjct: 510 KEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVAT 569
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ ++ + ++ ++ +E++K+ + D R+ + +G
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVG 610
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A L K G+ + +YNI+ C A + N M E+GV P+V +
Sbjct: 405 RGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVT 464
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ + ++ C++ + A L DM KG VP+ ++Y TL+++ C+K+K+++A+K+ M
Sbjct: 465 FTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMI 524
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG PD+ Y++++ G C GR +A K+ +M G N+ +Y +++ GL +G D
Sbjct: 525 NKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRAD 584
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGF 386
A K M+ G P V +L+ F
Sbjct: 585 EAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 169/396 (42%), Gaps = 63/396 (15%)
Query: 92 RHSN-------STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+HSN +LILI +L A+ F+ + IL L ++ P + ++ + E
Sbjct: 83 QHSNISLKPDLKAHLILISRLFEARKFATMKSILNGLVTDSDIECP--VSSIVDLVDE-- 138
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
++ F ML C NR+ + + +Y+ + G++ +S
Sbjct: 139 FESHFVEKFCDMLFRVCSD-----NRLFDETIRVYDYV----------EEKGLVIEERSC 183
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMP-DVESYRILMQGLCRKSQVNRAVDLLEDML 263
+++ A G++ F++M E V+S +++ LCR+ +V +A +L+++M+
Sbjct: 184 FVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMV 243
Query: 264 NKGFV-PDTLSYTTLLNSLCRKK-----------------------------------KL 287
KG V P+ +Y TLLN+ +K +
Sbjct: 244 GKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDI 303
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA K+ M+ K D+ Y++++ R G A + ++M +PN +Y L
Sbjct: 304 EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGAL 363
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+GG+C G + A+ + M SKG + + + + G+C GK+DEA + + K G
Sbjct: 364 IGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGI 423
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C ++ +LN +V+ +K
Sbjct: 424 NADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK 459
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 126 YPVTPSLFTYLI-KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+P + LI K E ++ D L F + + +P N ++ L RN L
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKL-IFNEIRKRGLRPTTVSFNTLINGLCKSRN-LDE 276
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L K+ ++ + P+ +Y++++ C G + +A LF++M +RG+ P+ ++ L+
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR +++ A++ ML G PD + Y TLLN LC+ + +A KL+ M++ G P
Sbjct: 337 GQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + Y T++ G+C+EG A ++ + M G + + V++ L+ G C G A++ +
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G P + +I G+C G V +L+E+ G P T+ +++ +C
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+M+ +L ++ + + D
Sbjct: 517 GQMKNANMLLEAMLNLGVTPD 537
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 165/380 (43%), Gaps = 18/380 (4%)
Query: 83 DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS----------- 131
++ S P FRH++ +Y + L + F I+ L S + +
Sbjct: 89 NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 132 ------LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+F L+ Y +S A++ FR + N + +L+ ++ + N
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI-NSNSPVTI 207
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + ++G P + YNI++ FC G I A +FN++ +RG+ P S+ L+ G
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ L + M PD +Y+ L++ LC++ +L A +L M+ +G P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ + ++ G CR R A M + G P+LV Y TL+ GLC G + A+K +
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P LI G+C G ++ A + + + + G + ++ C
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+ L E+V+ +K D
Sbjct: 448 RVRDAERTLREMVEAGMKPD 467
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI L + + + + ++ FT LI S D A+ T+ M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354
Query: 157 LEFNCKPLPKQLNRILELL-------------------------VTHRNY---------L 182
L KP N +L L +T+ L
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDL 414
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A ++ K ++ GV+ + ++ ++ FC +G + A +M E G+ PD +Y ++
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+K V LL++M G P ++Y L+N LC++ +++ A LL M G
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
PD + YN ++ G C+ G+A D K+ + G + + Y +LV
Sbjct: 535 TPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + A +T R M+E KP +++ N ++ F L K
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN-VKMGFKLLKEM 494
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G P +YN++M C G + A L M GV PD +Y IL++G C+
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG-- 552
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+A DLL+ KG + D YT+L++ + K R+
Sbjct: 553 -KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 588
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 33/347 (9%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ V PS +Y ++ + A ++ AL +R M+ + P + +
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAD 192
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L + +HG +P+ Y ++ A C G ++ A TL N+M G DV ++ ++
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR------- 296
+G+C +V A L++ M+ KG +P ++Y LL LCR ++ EA +L R
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 312
Query: 297 ------------------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
M +KGC PD Y+ ++ G C+ GR A ++L +M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G PN+V+Y ++ C GM+D + ++ M +KG + + + +I C G++
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
DEA G+++E+ G P ++ I+ +C E+ME+ + +++
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ N++ YN M+ A C +G + A L +M +G PD+ SY ++ LC
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
Q+ A + E++L +G V + ++Y T++++L R + ++A +L M + GC+ D+V
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C++G + +LE+M G PN VSY L+ LC + A + + M
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++G +P + LI G C +G + A +LE+L P T+ +++ C +
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 642
Query: 428 EKLGEVLNE-IVKVEIKGDTRIVE 450
+ +LN + V GD RI++
Sbjct: 643 DDAAMLLNRAMAAVCPVGDRRIMQ 666
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 126/241 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L+++ G P+ +Y+I+M C G I A L +M ++G P+V +Y I
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 386
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C+ + LLE+M KG ++ Y ++ +LC+ ++ EA L+ M+ +G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CNPDI YNT++ C + +A + E++ G + N ++Y T++ L G + A
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI G S + LIK C G VD + +LEE+ + G P+ ++ +++ ++
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566
Query: 422 C 422
C
Sbjct: 567 C 567
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 24/318 (7%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I++ + + +L + ++ + + +I + D A+ + M
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I+ L + + A +F++ + GV+ N +YN ++ A +G
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQ-MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 501
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +M G DV SY L++ +C+ V+R++ LLE+M KG P+ +SY
Sbjct: 502 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 561
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ LC+++++R+A +L +M +G PDIV YNT++ G C+ G A +LE + +
Sbjct: 562 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 621
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVA----------------KKYMQLMISKGF-------S 373
P++++Y L+ C + D A ++ MQ++ K F
Sbjct: 622 VHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKG 681
Query: 374 PHFSVSHALIKGFCNVGK 391
F S +K C GK
Sbjct: 682 DDFQHSLGCVKPSCPAGK 699
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 2/192 (1%)
Query: 253 NRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYN 310
RA+ LL+ + + G P SY +L+ L R +A L RM + P +
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
CR GRA +A +L M +GC+P+ V Y+T++ LCDQG A + M+
Sbjct: 180 VAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G + + +++G C +G+V EA +++ ++ G P T+ ++ +C + ++
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299
Query: 431 GEVLNEIVKVEI 442
+L + ++ +
Sbjct: 300 RAMLGRVPELNV 311
>gi|22325737|ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g17525, mitochondrial; Flags: Precursor
gi|330251547|gb|AEC06641.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 626
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 6/339 (1%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-KS 123
+ +LI Q A E F +AS P F HS STY L KL + F + +L + S
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
P ++F +I+ + + L R + + +F KP K N IL++LV +
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
F + G+ + +Y I+M+ I + L M GV P+ Y L+
Sbjct: 166 REF-FTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLL 224
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V RA L+ +M P+ +++ L+++ C ++KL ++ LL + G
Sbjct: 225 HALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+V V+ C EGR +A +VLE + S G ++V+ TLV G C G VA+++
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
M KG+ P+ + LI G+C+VG +D A ++
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM 379
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 157/381 (41%), Gaps = 54/381 (14%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ +L SE F LI Y +++ P
Sbjct: 232 KVGRAR----------SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++E+L + + A ++ + G + + N +++ +C G + +A
Sbjct: 282 DVVTVTKVMEVL-CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F +M +G +P+VE+Y +L+ G C ++ A+D DM + ++ TL+ L
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVH------YNTVVLGFCREGRAIDACKVL-------- 329
+ + K+L M+ + D VH YN V+ GF +E R DA + L
Sbjct: 401 GGRTDDGLKILEMMQ----DSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFP 456
Query: 330 -------------------------EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ M G +P+++ L+ G + + + +
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+++G+ P S +A+I GFC KV +E++ + G P +++ ++ ++C
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+++K + + +V+ I D
Sbjct: 577 GDIQKAWLLFSRMVEKSIVPD 597
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSM----LEFNCKPLPKQLNRILELLVTHRNYLR 183
P++ TY LI Y + + D AL TF M + +N L R L + + L+
Sbjct: 351 PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATF-NTLIRGLSIGGRTDDGLK 409
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM---FERGVMPDVESYR 240
+ S HG YN ++ F A KM F R V S++
Sbjct: 410 ILEMMQDSDTVHG--ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV---DRSFK 464
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ LC K ++ + M+ +G VP + L++ + K+ E+ +L+ M +
Sbjct: 465 LI--SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR 522
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P +N V++GFC++ + ++ K +EDM GC+P+ SY L+ LC +G D+
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG--DIQ 580
Query: 361 KKYMQL--MISKGFSPHFSVSHALIKGFC 387
K ++ M+ K P S+ +L+ FC
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLM--FC 607
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDI 217
K P+ ++R +L+ + D K+A+ G +P+ + ++ + +G I
Sbjct: 453 KLFPRAVDRSFKLISLCE---KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
+ L N M RG +P ++ ++ G C++ +V + +EDM +G VPDT SY L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC-REGRAIDACKVLEDM 332
L LC K +++A+ L RM K PD +++++ FC + AI L+D+
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQKTAIHVNSSLQDI 623
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 35/268 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A F + G LPN ++YN+++ +C G + A FN M + + ++
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK----------------GF------------------ 267
L++GL + + + +LE M + GF
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 268 -VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P + + L SLC K + + +M +G P I+ + ++ + + G+ ++
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++ DM + G LP ++ ++ G C Q K+++ M +G P + L++
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C G + +A + +++ P W
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPDPSMW 601
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI Y++ + +L+ M+ P N ++ + ++ + + +
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI-IGFCKQDKVMNGIKFVEDMAER 557
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G +P+T+SYN ++ C GDI A+ LF++M E+ ++PD + LM L +K+ ++
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIH 615
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAID 324
GF+ +Y L + LC ++ Y+LL M G PD + T++ GF R
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM-QLMISKGFSPHFSVSHALI 383
V++ + G P+L + +++ L + + D+A+++ + M++ G L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDI-DIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
KG ++ + +L+ + +G AP+ + ++ +C ++ + +++E+
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 4/320 (1%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR--PAF 186
+P L++ + + S PD A+ F ++ + LP L++ H + R A
Sbjct: 107 SPLLYSRAVSVLLASE-PD-AVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAV 164
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ F P YN + + G I +A L+N+M G +P+ +Y +LM GL
Sbjct: 165 EAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGL 224
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ A+ + ++ML +G VPD YT LL+SLC + ++ +A +LLC MK GC PD
Sbjct: 225 CKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDE 284
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y + G C+ GR +A E + G L+ Y L+ GL G FD Y
Sbjct: 285 VTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTE 344
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+ K SP ++ LI+ F G+ +A +L+E+ G P + ++ +
Sbjct: 345 MLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGN 404
Query: 427 MEKLGEVLNEIVKVEIKGDT 446
+++ +++E+++ + D+
Sbjct: 405 IDRAQSLMSEMLQNNVVLDS 424
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 152/338 (44%), Gaps = 36/338 (10%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D L ++ P + F L+ ++ + A++ F M +F+C+P N + ++L
Sbjct: 130 DALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVL 189
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
V R + A L+ G LPN+ +Y ++M C G A +F++M ERG++PD
Sbjct: 190 V-DRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPD 248
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA---YK 292
V+ Y +L+ LC + ++ A LL M G PD ++YT L+ LC+ ++ EA ++
Sbjct: 249 VKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308
Query: 293 LL--------------------------------CRMKVKGCNPDIVHYNTVVLGFCREG 320
LL M K +PDI Y ++ F G
Sbjct: 309 LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAG 368
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R DA +L++M G +P+ Y TL+ L D G D A+ M M+ + +
Sbjct: 369 RTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+I G C G +D+A V +E+ + G P T+ ++
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALI 466
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 18/267 (6%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ AF L G +P+T YN +++A G+I A +L ++M + V+ D ++ I+
Sbjct: 371 KDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIM 430
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+K +++A+ + ++M G P ++Y L++ L R L EA L +M++ G
Sbjct: 431 ICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM-GN 489
Query: 303 NP--------------DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
NP D +V G C+ G+ + A K+L + +G +P++V+Y TL+
Sbjct: 490 NPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLI 549
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC D A + + + KG SP LI G + ++A + + +L++G
Sbjct: 550 NGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGF 609
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLN 435
P + ++ +C M+KL + +N
Sbjct: 610 PSLPIYNTMMRSLC---RMKKLSQAIN 633
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 28/277 (10%)
Query: 96 STYLILILKL---GRAK-YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
+ Y ILI + GR K F L+D+ +K + + P F Y L+K + DRA
Sbjct: 355 TLYTILIRRFAEAGRTKDAFLLLDE----MKDKGF--VPDTFCYNTLLKALFDVGNIDRA 408
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
ML+ N L + I+ + + + A +F +HG P +YN ++
Sbjct: 409 QSLMSEMLQNNV-VLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALID 467
Query: 210 AFCFNGDISIAYTLFNKMFERGVMP--------------DVESYRILMQGLCRKSQVNRA 255
G + A LF+KM E G P D ES R L+ G+C+ QV +A
Sbjct: 468 GLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKA 526
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
LL ++ G VPD ++Y TL+N LC+ K L A +L +++KG +PD + Y T++ G
Sbjct: 527 YKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDG 586
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
R R DA + +++ +G P+L Y T++ LC
Sbjct: 587 LWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLC 623
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 54/345 (15%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
ALK F MLE P K +L L + + A L S ++G P+ +Y + +
Sbjct: 233 ALKMFDEMLERGIVPDVKIYTVLLSSLC-NEGRIEDAGRLLCSMKENGCPPDEVTYTVFL 291
Query: 209 RAFCFNGDISIAY-----------------------------------TLFNKMFERGVM 233
C G + A+ + + +M + +
Sbjct: 292 SGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSIS 351
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PD+ Y IL++ + A LL++M +KGFVPDT Y TLL +L + A L
Sbjct: 352 PDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSL 411
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ M D +N ++ G C++G A +V ++M +GC P +++Y L+ GL
Sbjct: 412 MSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYR 471
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVS--------------HALIKGFCNVGKVDEACGVL 399
GM + A+ M G +P + L+ G C G+V +A +L
Sbjct: 472 AGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLL 530
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
++++G P T+ ++ +C + ++ + E+ ++KG
Sbjct: 531 RGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKEL---QLKG 572
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN- 200
+ L D+A++ F M E C P N +++ L L A LF HK + N
Sbjct: 436 KKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLY-RAGMLEEARMLF---HKMEMGNNP 491
Query: 201 ---------------TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
T+S ++ C +G + AY L + E GV+PDV +Y L+ G
Sbjct: 492 SLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLING 551
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A+ L +++ KG PD ++Y TL++ L R + +A L + G P
Sbjct: 552 LCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPS 611
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDM--------PSNGCLPNLVSYRTLVGGLCDQGMF 357
+ YNT++ CR + A + D P + + N + + G D+ +
Sbjct: 612 LPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIAN--ARKCFEDGFLDETVK 669
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
++ K Q+ S +P+ + G C V K+D+A + L E+ +++
Sbjct: 670 ELI-KIDQVYGSLNPNPY----TIWVIGLCQVRKIDDALRIFHIL--------EEFGIVV 716
Query: 418 VPQICA 423
P CA
Sbjct: 717 TPACCA 722
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+L K +G L N Y I + C I A +F+ + E G++ +L+ L
Sbjct: 670 ELIKIDQVYGSL-NPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYL 728
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C +N AVD++ L+K F+ LL SLC + + +A L RM + G + D+
Sbjct: 729 CWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMHLVGYDMDV 788
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P + ++ V R + A
Sbjct: 280 IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE-A 338
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF--------------------- 224
+L+ G++PNT +YN M+ FC + A +F
Sbjct: 339 EELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDG 398
Query: 225 --------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
++M E G++ D +Y L+ G C +N A+DL + M++ G PD
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G E
Sbjct: 459 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINE 518
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ ++MP G +PN ++Y +++ GLC Q D A + M SK FSP
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ L+ G+C G+VD+ + E+ + G T++ ++
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 121/221 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L+ + G+ P+ +YN M+ FC +G S A L +M ER + P+V +Y L+
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y ++++ C++ +L A + M KGC+P
Sbjct: 328 AYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP 387
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ +NT++ G+C R D ++L +M G + + +Y TL+ G C G + A
Sbjct: 388 DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLS 447
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
Q MIS G P + L+ G C+ GK+ +A + + + K+
Sbjct: 448 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 160/336 (47%), Gaps = 10/336 (2%)
Query: 116 DILITL----KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L + + P F LIK + + AL TF + + +P + +
Sbjct: 94 DLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL 153
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L L + + A DLF + PN ++ +M C G + A L ++M E G
Sbjct: 154 LHGLCVE-DRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG 208
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREA 290
+ P+ +Y ++ G+C+ A++LL M + P+ + Y+ +++ L + + +A
Sbjct: 209 LQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDA 268
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+ L M+ KG PD+ YN ++ GFC GR +A ++L++M PN+V+Y L+
Sbjct: 269 HNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+ F A++ M+ +G P+ +++I GFC ++D A + + G +P
Sbjct: 329 YVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPD 388
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + ++ E+L+E+ + + DT
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 14/287 (4%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P +FT+ LI Y + D + M E N ++ + L A
Sbjct: 386 SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGD-LNAAL 444
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RGVMPD 235
DL + GV P+ + N ++ C NG + A +F M + GV PD
Sbjct: 445 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPD 504
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V++Y IL+ GL + + A +L ++M ++G VP+T++Y++++N LC++ +L EA ++
Sbjct: 505 VQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFD 564
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M K +PD+V +NT+V G+C+ GR D ++ +M G + + ++Y TL+ G G
Sbjct: 565 SMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ A Q MIS G P +++ + ++ A +LE+L
Sbjct: 625 NINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 129/248 (52%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN Y+ ++ +G S A+ L+ +M E+G+ PD+ +Y ++ G C + + A L
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++ML + P+ ++Y+ L+N+ +++K EA +L M +G P+ + YN+++ GFC+
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK 366
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ R A + M + GC P++ ++ TL+ G C D + + M G +
Sbjct: 367 QNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT 426
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI GFC VG ++ A + ++++ +G P T ++ +C +++ E+ +
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486
Query: 439 KVEIKGDT 446
K ++ D
Sbjct: 487 KSKMDLDA 494
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M +P V + LM + R + + + L + M K D S+ L+
Sbjct: 61 AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C KL A ++ G PD+V ++T++ G C E R +A + M C P
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRP 176
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V++ TL+ GLC +G A + M+ G P+ ++ G C +G A +L
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236
Query: 400 EELLKAGEAPHEDTWVMIVPQICAG 424
K E H V+I I G
Sbjct: 237 R---KMEEMSHIKPNVVIYSAIIDG 258
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 196/417 (47%), Gaps = 53/417 (12%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
V +LI + S L + F++A + F H++ +Y +++ LGRA+ ++ + L ++K
Sbjct: 92 VLRLIKTPSKAL---QFFNWAP-ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRR 147
Query: 125 H---YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ F LI+ Y ++ L +++ F SM
Sbjct: 148 SNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSM------------------------- 182
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYR 240
KS GV P+ ++N ++ G ++A ++F++M GV PD ++
Sbjct: 183 --------KSV---GVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFN 231
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM--K 298
IL++G C+ S V+ ++M PD ++Y TL++ LCR K+ A+ ++ M K
Sbjct: 232 ILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKK 291
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
NPD+V Y T+V G+C + +A V E+M S G PN ++Y TL+ GLC+ D
Sbjct: 292 STNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKID 351
Query: 359 VAKKYMQLMI-SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
K+ + + GF P + L+ CN G +++A V E+++ P T+ ++
Sbjct: 352 KIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVL 411
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI----KGDTRIVEAGIGLEDYLI--GKTRSRPR 468
+ +C E+ ++ +E+ + EI G T +V A + ++L GKT R
Sbjct: 412 IRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAER 468
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 184/415 (44%), Gaps = 59/415 (14%)
Query: 96 STYLILILKLGRAKYF-SLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
++ L+++LK GR S+ D++L T Y VTP +T+ LI+ + ++++ D +
Sbjct: 195 NSLLLILLKRGRTNMAQSVFDEMLST-----YGVTPDTYTFNILIRGFCKNSMVDEGFRF 249
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH--GVLPNTKSYNIMMRA 210
F+ M F C P N +++ L + A ++ K + P+ +Y ++R
Sbjct: 250 FKEMSRFKCDPDLVTYNTLVDGLC-RAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRG 308
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG-FVP 269
+C +I A +F +M +G+ P+ +Y L++GLC ++++ + E L G F+P
Sbjct: 309 YCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIP 368
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
DT + TL+N+ C L +A ++ +M V PD Y+ ++ C+ G A ++
Sbjct: 369 DTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428
Query: 330 EDMP-------SNGCLPNLVSYRT----------------------------------LV 348
+++ +GC P + +Y++ L+
Sbjct: 429 DELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILI 488
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C +G F+ + + LM+ + F P +LI G G+ A LE+++K+
Sbjct: 489 KGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHV 548
Query: 409 PHEDTWVMIVPQI----CAGEEMEKLGEVLNEIVKVEIKGDTRIVEA--GIGLED 457
P T+ I+ ++ CA E + +L ++ I T V G GL D
Sbjct: 549 PETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRD 603
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C PL + E L + + A +F+ K G + S+ I+++ C G
Sbjct: 443 CTPLVAAYKSMFEFLCRNGKTAK-AERVFRQLMKRGT-QDPLSFKILIKGHCREGTFEAG 500
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
Y L M R +PD+E+Y+ L+ GL +K + A LE M+ VP+T ++ ++L
Sbjct: 501 YELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILAR 560
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDI-VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
L K E+ + + M +I + +TV L F G A K++ + +NG
Sbjct: 561 LLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFG-SGLRDKAFKIVGLLYANGY-- 617
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+V L+G L F +A K + + K + + +I+G C + + EA G+
Sbjct: 618 -VVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLY 676
Query: 400 EELLKAG 406
EL++ G
Sbjct: 677 YELVEKG 683
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 141/291 (48%), Gaps = 1/291 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI Y L + A + SM + KP N I+ L Y R L +
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ P+T +YN ++ C + S A +F +M +GV+PD+ S+ LM R +
Sbjct: 64 NI-GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A+ DM G VPD + YT L++ CR + EA K+ M +GC D++ YNT+
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+E DA K+ ++M G LP+ ++ TL+ G C G A M +
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
P + LI GFC VG++++A + + ++ P+ T+ +++ C+
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCS 293
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 3/311 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PSLFTY +I + RA ML P N +L + R+ A +
Sbjct: 34 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL-VESCRRDNFSEAKE 92
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F + GV+P+ S++ +M F N + A F M + G++PD Y +LM G C
Sbjct: 93 IFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 152
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + A+ + ++ML +G V D ++Y T+LN LC++K L +A KL M +G PD
Sbjct: 153 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 212
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ T++ G C++G A + M P++V+Y TL+ G C G + A + M
Sbjct: 213 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 272
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
IS+ P+ LI +C+VG V EA + + +++ G P T ++ C +
Sbjct: 273 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 332
Query: 428 EKLGEVLNEIV 438
K E L ++
Sbjct: 333 SKADEFLGRMI 343
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 130/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF++ S G+ P+ +YN ++ C G + A + +M G+ PD +Y
Sbjct: 17 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 76
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+ + A ++ +ML +G VPD +S+++L+ R + L +A MK G
Sbjct: 77 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFG 136
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y ++ G+CR G ++A K+ ++M GC+ ++++Y T++ GLC + M A
Sbjct: 137 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 196
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K M+ +G P F LI G C G + +A + + + P + ++
Sbjct: 197 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 256
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C EMEK E+ + ++ +I
Sbjct: 257 CKVGEMEKASELWDGMISRKI 277
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 14/277 (5%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPS-- 131
AKEIF RQ P+ +S L+ R ++ +D L+ + + + + P
Sbjct: 90 AKEIFGEMLRQGVVPDLVSFSS----LMAVFSRNRH---LDQALVYFRDMKKFGLVPDNV 142
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T L+ Y + ALK MLE C N IL L + L A LF
Sbjct: 143 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK-MLTDADKLFDE 201
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G LP+ ++ ++ C +G+++ A +LF M +R + PD+ +Y L+ G C+ +
Sbjct: 202 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 261
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A +L + M+++ P+ ++Y L+N+ C + EA++L M KG P +V NT
Sbjct: 262 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 321
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
V+ G+CR G + A + L M + G P+ +SY TL+
Sbjct: 322 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 139/290 (47%), Gaps = 5/290 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTF 153
+TY L+++ R FS +I + + V P L F+ L+ +++ + D+AL F
Sbjct: 72 TTYNTLLVESCRRDNFSEAKEIFGEMLRQ--GVVPDLVSFSSLMAVFSRNRHLDQALVYF 129
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R M +F P ++ + N L A + + G + + +YN ++ C
Sbjct: 130 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLE-ALKIRDEMLEQGCVLDVIAYNTILNGLCK 188
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
++ A LF++M ERG +PD ++ L+ G C+ + +A+ L M + PD ++
Sbjct: 189 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 248
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL++ C+ ++ +A +L M + P+ + Y ++ +C G +A ++ + M
Sbjct: 249 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 308
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
G P LV+ T++ G C G A +++ MI+KG +P + LI
Sbjct: 309 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + +AL F +M + N KP N +++ + A +L+
Sbjct: 214 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC-KVGEMEKASELWDGM 272
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN +Y I++ A+C G +S A+ L++ M E+G+ P + + +++G CR
Sbjct: 273 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 332
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++A + L M+ KG PD +SY TL+N R+
Sbjct: 333 SKADEFLGRMIAKGVAPDHISYNTLINDGKRR 364
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%)
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y TL+ + CR+ L EA++++ M KG P + YN ++ G C++GR A +L +
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M + G P+ +Y TL+ C + F AK+ M+ +G P +L+ F
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+D+A ++ K G P + +++ C M + ++ +E+++
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 169
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ +CREG +A +++ M G P+L +Y ++ GLC +G + AK +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M++ G SP + + L+ C EA + E+L+ G P
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVP 104
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+V+Y TL+G C +G+ + A + M M KG P +A+I G C G+ A G+L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
E+L G +P T+ ++ + C + + E+ E+++
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR 99
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++ AF L+ + G+ P + N +++ +C +GD S A +M +GV PD SY
Sbjct: 296 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 355
Query: 241 ILMQGLCRKS 250
L+ R+S
Sbjct: 356 TLINDGKRRS 365
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 150/304 (49%), Gaps = 3/304 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P L TY ++K + D+A + FR+M P + N ++ L A
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC-RAGELEEA 283
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+K V P+ S++ ++ F G++ A +M E G+MPD Y +++ G
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR + A+ + ++M+ G +PD ++Y TLLN LC++++L +A +LL MK +G PD
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ + T++ G+CR+G A + + + P++V+Y TL+ G+C QG A +
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S+ P+ LI C G+VD A L+E++ G P+ T+ I+ C
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 426 EMEK 429
+ K
Sbjct: 524 NVSK 527
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 171/348 (49%), Gaps = 5/348 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RALKTFR 154
T I++ + F +D ++ + E V P + T+ + + A D A+
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEM--EKRCVFPDVVTHNVMVDARFRAGDVEAAMALID 218
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
SM+ KP N +L+ L+ + + + A ++F++ GV P+ +S+N+++ FC
Sbjct: 219 SMVSKGIKPGLVTYNSVLKGLLRNGRWDK-AREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A + +M R V PDV S+ L+ R+ +++ A + L +M G +PD + Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T ++ CR + EA ++ M GC PD+V YNT++ G C+E R DA ++L +M
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P+L ++ TL+ G C G + A ++ + + P + LI G C G + +
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
A + +++ P+ T+ +++ C +++ L+E+V I
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T +I + + L AL+ M+ F C P N +L L R L A +L
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR-LSDAEELLNE 394
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ GV P+ ++ ++ +C +G+I A F+ + ++ + PD+ +Y L+ G+CR+
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ +A +L +DM ++ P+ ++Y+ L++S C K ++ A+ L M KG P+I+ YN+
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G + L M + +P+L++Y TL+ G +G A +++M ++
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV-MIVPQICAG 424
P + +I GF G + EA V +++ G P T++ MI + AG
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAG 628
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
DI+ +L + P +F LI+ Y +S P A + FR +L+ P+P + L
Sbjct: 75 DIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRV-PIPAAASNALLAA 133
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ + D ++ NT + NIM+ ++C T+ ++M +R V PD
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V ++ +++ R V A+ L++ M++KG P ++Y ++L L R + +A ++
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M G PD+ +N ++ GFCR G +A + ++M P++VS+ L+G +G
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D A +Y++ M G P + +I GFC G + EA V +E++ G P T+
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373
Query: 416 MIVPQICAGEEMEKLGEVLNEI 437
++ +C + E+LNE+
Sbjct: 374 TLLNGLCKERRLSDAEELLNEM 395
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+T + +++S C+ + E ++ M+ + PD+V +N +V R G A ++
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ M S G P LV+Y +++ GL G +D A++ + M + G +P + LI GFC
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
G+++EA +E+ P ++ ++ EM+ E L E+ + + D I
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 450 EAGIG 454
IG
Sbjct: 338 TMVIG 342
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Query: 289 EAYKLLCRMKVKGCNPDIVHY--NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+AY+L V N ++ Y N +V +C+ + + V+ +M P++V++
Sbjct: 145 DAYRL-----VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNV 199
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V G + A + M+SKG P ++++KG G+ D+A V + G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
AP ++ M++ C E+E+ E+ + D IGL
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGL 308
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 168/339 (49%), Gaps = 8/339 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +TY LI + + A F M+E P N +++ ++ L A
Sbjct: 239 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC-NKGDLERA 297
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F K G++P+ +YN+++ A G + A + +M ++G++PD +Y IL+ G
Sbjct: 298 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 357
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R RA DL +ML+KG P ++YT+L+ L R+ +++EA L ++ +G +PD
Sbjct: 358 YSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 417
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ +N ++ G C G A +L++M P+ V++ TL+ G C +G + A+ +
Sbjct: 418 VIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 477
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G P + LI G+ G + +A V +E+L G P T+ ++ +C +
Sbjct: 478 EMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQ 537
Query: 426 EMEKLGEVLNEIVKVEIKGDT----RIVEAGIGLEDYLI 460
E + E+L E+V I D ++E G+G D L+
Sbjct: 538 EGDLAEELLKEMVNKGISPDDSTYLSLIE-GMGNVDTLV 575
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 12/346 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A+ I D A R + TY LI K GR + S + D ++ + + P+ T
Sbjct: 227 ARRILD-AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG-----LVPNAVT 280
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y LI Y +RA M++ P N ++ L + A D+ K
Sbjct: 281 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME-GRMGEADDMIKEM 339
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G++P+ +YNI++ + G+ A+ L N+M +G+ P +Y L+ L R++++
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 399
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A DL E +L++G PD + + +++ C + A+ LL M K PD V +NT+
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 459
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CREG+ +A +L++M G P+ +SY TL+ G +G A M+S GF
Sbjct: 460 MQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+P +ALIK C + D A +L+E++ G +P + T++ ++
Sbjct: 520 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 137/269 (50%)
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ R + A + + G+ P++ +Y ++ C G + A LF+KM E G++P+
Sbjct: 219 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 278
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y L+ G C K + RA ++M+ KG +P +Y L+++L + ++ EA ++
Sbjct: 279 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 338
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ KG PD + YN ++ G+ R G A A + +M S G P V+Y +L+ L +
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + ++ +G SP + +A+I G C G V+ A +L+E+ + P E T+
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ C ++E+ +L+E+ IK D
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPD 487
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G P+V SY ++ G + + A +L+ M KG PD+ +Y +L++ +C++ +L EA
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L +M G P+ V YNT++ G+C +G A ++M G +P++ +Y LV
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
L +G A ++ M KG P + LI G+ G A + E+L G P
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
T+ ++ + M++ ++ +I+ + D + A I
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 152/296 (51%), Gaps = 2/296 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P T S F+ +I + D AL FR M+ CK N +++ L ++ N L +
Sbjct: 455 PDTTS-FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL-SNSNRLEECY 512
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L K G P ++N + C D++ A + +M G P ++ Y +L++ L
Sbjct: 513 LLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 572
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ + A + L +M+ +GF+PD ++Y+ ++ + K + +A ++ + +G PD+
Sbjct: 573 CKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDV 632
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ GFC+ R +A +L++M + G +P++V+Y L+ G C G D A +
Sbjct: 633 VAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSR 692
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M+ K P+ LI G CN G+ D+A + E+ G +P+ +++ ++ +C
Sbjct: 693 MVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC 748
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 2/307 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+ LI + SN + + M +P N I L R + A D+ +
Sbjct: 494 LYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLC-RREDVTGALDMVRE 552
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
HG P K Y ++++ C + A +M G +PD+ +Y + G +
Sbjct: 553 MRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKA 612
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V++A+++ D+ +G+ PD ++Y TL+N C+ K++ EA+ +L M KG P +V YN
Sbjct: 613 VDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNL 672
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C+ G A L M PN+++Y TL+ GLC+ G D A M KG
Sbjct: 673 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 732
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP+ ALI G C G D A E+ + E P +V ++ + +
Sbjct: 733 CSPNRISFIALIHGLCKCGWPDAALLYFREMGER-ETPDTIVYVALITSFISNKNPTLAF 791
Query: 432 EVLNEIV 438
E+L E+V
Sbjct: 792 EILKEMV 798
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 125/248 (50%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K V P+T S++I++ C G + +A +LF M G +V Y L+ L +++
Sbjct: 450 KEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLE 509
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
LL++M GF P ++ ++ LCR++ + A ++ M+V G P I HY +V
Sbjct: 510 ECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLV 569
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
C+ R+ +AC L +M G LP++V+Y + G D A + + + ++G+
Sbjct: 570 KQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYC 629
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + LI GFC V +V EA +L+E++ G P T+ +++ C ++++
Sbjct: 630 PDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHC 689
Query: 434 LNEIVKVE 441
L+ +V E
Sbjct: 690 LSRMVGKE 697
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF+ + G N YN ++ + + Y L +M G P ++
Sbjct: 473 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 532
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ LCR+ V A+D++ +M G P YT L+ LC++K+ EA L M +G
Sbjct: 533 IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREG 592
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV Y+ + GF + A ++ D+ + G P++V+Y TL+ G C A
Sbjct: 593 FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAH 652
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M++KG P + LI G+C G +D+A L ++ P+ T+ ++ +
Sbjct: 653 DILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGL 712
Query: 422 CAGEEMEKLGEVLNEI 437
C + + NE+
Sbjct: 713 CNAGRPDDAIHLWNEM 728
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 193/452 (42%), Gaps = 68/452 (15%)
Query: 11 KIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIA 70
+++ T + A P + S + P +P+ Q+ + N S + V+ +++
Sbjct: 48 RLICTKSSASFSSPHGAHITNALISIFTKQPFNPDNQE---LRNFGSMLTHEV-VENVLS 103
Query: 71 SQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTP 130
+A F++AS Q F H+ TY + L A+ + + + + + + ++P
Sbjct: 104 GLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSP 163
Query: 131 SLFTYLIK------IYAESNLPDRALKTFR----SMLEFNC------------------- 161
+ I+ + E+NL +K R + FNC
Sbjct: 164 GALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLK 223
Query: 162 -------KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+P L +L+ R + + A +F + G + + +I++ F
Sbjct: 224 EMCDSGWEPDKYTLTSVLQAYCNSRKFDK-ALSVFNEIYGRGWV-DGHVLSILVLTFSKC 281
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A+ L +M + G+ + +++ +L+ G R+S+V++A+ L + M GF PD Y
Sbjct: 282 GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVY 341
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV----LE 330
L+ LC KK++ +A LL MK G +PDI + ++ +C E +D ++ LE
Sbjct: 342 DALIGGLCAKKEIEKALHLLSEMKELGIDPDI-QILSKLIAYCSE--EVDIYRLIEERLE 398
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH---------- 380
D+ + L+ Y +++ GL + D A ++ M ++ +F V+
Sbjct: 399 DLDTEAM---LLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRP 455
Query: 381 ------ALIKGFCNVGKVDEACGVLEELLKAG 406
+I G CN GK+D A + ++++ G
Sbjct: 456 DTTSFSIVIDGLCNTGKLDLALSLFRDMVRVG 487
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 39/262 (14%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+P +H Y +L+ +L + K + + L + E + ++ I + +
Sbjct: 558 HEPWIKH----YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAV 613
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+AL+ FR + P N ++ + + A D+ G++P+ +YN+
Sbjct: 614 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKR-VSEAHDILDEMVAKGLVPSVVTYNL 672
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ +C NGDI A+ ++M + P+V +Y L+ GLC + + A+ L +M KG
Sbjct: 673 LIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 732
Query: 267 -------FV---------------------------PDTLSYTTLLNSLCRKKKLREAYK 292
F+ PDT+ Y L+ S K A++
Sbjct: 733 CSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFE 792
Query: 293 LLCRMKVKGCNPDIVHYNTVVL 314
+L M KG PD + N + L
Sbjct: 793 ILKEMVAKGKFPDPLDKNDLPL 814
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 37/244 (15%)
Query: 207 MMRAFCFNGDISIAYTLFNKM-FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+R G + A LF+++ R +P+ S+ L++ + + ++ L++M +
Sbjct: 169 FIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDS 228
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G+ PD + T++L + C +K +A + + +G V + +VL F + G A
Sbjct: 229 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSKCGEVDKA 287
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+++E M G N K F LI G
Sbjct: 288 FELIERMEDLGIRLN----------------------------EKTFC-------VLIHG 312
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
F +VD+A + +++ K+G AP + ++ +CA +E+EK +L+E+ ++ I D
Sbjct: 313 FVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPD 372
Query: 446 TRIV 449
+I+
Sbjct: 373 IQIL 376
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
Query: 219 IAYTLFNKMFERGVMP-DVESYRILMQGLCRKSQVNRAVDLLE-DMLNK--GFVPDTLSY 274
IAY FN ++G + +Y + L Q N + LL D++N P L +
Sbjct: 110 IAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQ-NAPLSLLSMDIVNSRCAMSPGALGF 168
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKV-KGCNPDIVHYNTVVLGFCREGRAIDACKV-LEDM 332
+ L + EA L ++K+ + C P+ +N ++ + G +ID ++ L++M
Sbjct: 169 --FIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSG-SIDLVEMRLKEM 225
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G P+ + +++ C+ FD A + +G+ +S L+ F G+V
Sbjct: 226 CDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLS-ILVLTFSKCGEV 284
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAG 452
D+A ++E + G +E T+ +++ ++K ++ ++ K D + +A
Sbjct: 285 DKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDAL 344
Query: 453 IG 454
IG
Sbjct: 345 IG 346
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 19/388 (4%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDIL-------ITLKS---- 123
LA + + +QP +H Y + L +A+ + IL I KS
Sbjct: 92 LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGA 151
Query: 124 --EHYPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ YP+ PS+F LI++Y + + D A++TF + KP N IL +V
Sbjct: 152 LMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKD 211
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + LF+ G+ PN ++NI++ C G++ A L +M E G +P + +
Sbjct: 212 KR-TELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ C+K + A++L++ M+ KG D +Y +++LC + +AY LL +M+
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ +P+ V YNT++ GF +EG+ A +V +M PN V+Y L+GG C G F+
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M + G + L+ G C K + A +LE + + +++
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C +++ +++ + K + D
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDV 478
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 1/291 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T L+ +++ P A F M++ P N I++ + R + A D F +
Sbjct: 726 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS-CSRRGQMMKANDFFST 784
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV PN +YNI++ F + +L++ M G+ PD ++ L+ GL +
Sbjct: 785 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 844
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ V LL M+ +G + D ++ L+N K+R+A+ L+ M G PD YN
Sbjct: 845 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 904
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ G ++ ++ VL +M NG +P Y TL+ G+C G A K M + G
Sbjct: 905 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 964
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
F H A+++G + GK ++A VL+ +L+ P T+ ++ + C
Sbjct: 965 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1015
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 14/315 (4%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NRILELLVT- 177
E P++ TY L+ Y + A++ M+ CK + + N ++ L T
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI---CKGIEADVCTYNVFIDNLCTN 316
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
HR+ A+ L K K + PN +YN ++ F G I +A +FN+M + + P+
Sbjct: 317 HRS--AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 374
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ G C A+ LL+ M G + ++Y TLLN LC+ +K A +LL RM
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 434
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+V + Y ++ G C+ G +A +++ +M +G P++++Y +L+ G C G
Sbjct: 435 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 494
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
AK+ + M G + + LI FC G V EA V + G T ++
Sbjct: 495 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVL 554
Query: 418 VPQICAGEEMEKLGE 432
V +C KLGE
Sbjct: 555 VSSLCRD---GKLGE 566
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+ TY LI + + A + F M +F+ P N ++ H A
Sbjct: 334 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC-HVGDFEEA 392
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G+ N +Y ++ C + +A L +M ++ +Y +L+ G
Sbjct: 393 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 452
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ AV L+ +M G PD ++Y++L+N CR ++ A +++CRM G +
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+T++ FC+ G +A KV M NG + + LV LC G A+K++
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P+ +I G+ ++G A ++++K G+ P T+ ++ +C G
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 632
Query: 426 EMEKLGEVLNEI 437
+ + + LN +
Sbjct: 633 NLVEAKKFLNRL 644
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y +++ C NG + A L M++ GV PDV +Y L+ G CR + A +++ M
Sbjct: 445 AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 504
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G V + + Y+TL+ + C+ + EA K+ M G D N +V CR+G+
Sbjct: 505 YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 564
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A K L M G +PN ++Y ++ G G A + MI G P F +L
Sbjct: 565 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 624
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+KG C G + EA L L A + ++ + C + + + +++V+ +
Sbjct: 625 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 684
Query: 443 KGDT 446
D+
Sbjct: 685 LPDS 688
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 145/338 (42%), Gaps = 8/338 (2%)
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
+D T++ + V P+L TY L+ +++ R L + +M+ P + ++
Sbjct: 779 NDFFSTMR--WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 836
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L ++ L G L + ++NI++ + +G + A+ L N M GV
Sbjct: 837 -LGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 895
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD ++Y + GL +KS + +L +ML G +P Y TL+N +CR ++ A+K
Sbjct: 896 FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 955
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L M+ G V + +V G G+ DA VL+ M LP + ++ TL+ C
Sbjct: 956 LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1015
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
A K +M G + LI G C G A + EE+ P+
Sbjct: 1016 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1075
Query: 413 TWVMIVPQICAGEEM---EKLGEVLNEIVKVEIKGDTR 447
T+ ++V I A + EKL L E + G T+
Sbjct: 1076 TYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQ 1113
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++PN+ +Y+ ++ + GD A++ F+ M + G P +Y L++GLC+ + A
Sbjct: 578 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 637
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L + D++ Y TLL C+ L EA L +M PD Y++++ G
Sbjct: 638 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 697
Query: 316 FCREGRAIDA-CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
CR+G+A+ A C M PN V Y LV GL G A + + M+ KG P
Sbjct: 698 LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 757
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+A+I ++C +++KA + W + P +
Sbjct: 758 DTVAFNAII----------DSCSRRGQMMKANDFFSTMRWWGVCPNL 794
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 1/255 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LIL L ++ L +L + E F LI Y+ES +A M
Sbjct: 831 TFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFM 890
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
P N I L ++ R + + ++GV+P Y ++ C GD
Sbjct: 891 NTLGVFPDRDTYNHIFNGL-NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A+ L ++M G + +++GL + A+ +L+ ML +P ++TT
Sbjct: 950 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1009
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ CR K+ EA KL M++ G D+V YN +++G C G + A ++ E+M
Sbjct: 1010 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069
Query: 337 CLPNLVSYRTLVGGL 351
PN+ +Y LV +
Sbjct: 1070 LCPNITTYAVLVDAI 1084
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 155/386 (40%), Gaps = 23/386 (5%)
Query: 70 ASQSDPLLAKEIFD---YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
S DPL A FD + P+F S +LK G K +L++ + +
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGS-----LLK-GLCKGGNLVEAKKFLNRLHYI 647
Query: 127 P--VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
P V ++ L+ +S A+ F M++ N P + +L L +
Sbjct: 648 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC-RKGKAVT 706
Query: 185 AFDLFKSAHKHGVL-PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A LF +A G L PN Y ++ G A+ F +M ++G PD ++ ++
Sbjct: 707 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 766
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
R+ Q+ +A D M G P+ +Y LL+ +K+ L L M +G
Sbjct: 767 DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 826
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD + +++++LG + G K+L M G L + ++ L+ + G A
Sbjct: 827 PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDL 886
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC- 422
+ M + G P + + G E+ VL E+L+ G P ++ ++ +C
Sbjct: 887 VNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCR 946
Query: 423 ---------AGEEMEKLGEVLNEIVK 439
+EME LG +E+ +
Sbjct: 947 VGDIQGAFKLKDEMEALGFGSHEVAE 972
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 153/387 (39%), Gaps = 45/387 (11%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
IG C V D A + D+ R + TY L+ L + + F L +L
Sbjct: 380 IGGHCHV-------GDFEEALRLLDHM-EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 431
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++ V +T LI ++ + D A++ +M + P + ++
Sbjct: 432 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 491
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N ++ A ++ ++ G++ N Y+ ++ FC +G+++ A ++ M G D +
Sbjct: 492 GN-IKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 550
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT----------------------- 275
+L+ LCR ++ A L M G VP++++Y
Sbjct: 551 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 610
Query: 276 ------------TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+LL LC+ L EA K L R+ D V YNT++ C+ G
Sbjct: 611 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 670
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPHFSVSHAL 382
+A + + M N LP+ +Y +L+ GLC +G A + +G P+ + L
Sbjct: 671 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 730
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAP 409
+ G G A EE++K G P
Sbjct: 731 VDGLSKAGHPKAAFYFFEEMMKKGTCP 757
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ ++ ++ AV+ E + GF P + +L S+ + K+ + L M
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG P++ +N ++ G C EG A +L+ M NG +P +V+Y TL+ C +G +
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + MI KG + I C + +A +L+++ K +P+E T+ ++
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ +V NE+ K ++ + A IG
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 381
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 171/382 (44%), Gaps = 33/382 (8%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
SD + A F +A Q +RHS +Y ++ LG+ K F L+ ++ + V+ +
Sbjct: 138 SDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLAT 197
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP-------- 184
T +++ A ++ A+ F M +F +N +L+ L R+ R
Sbjct: 198 MTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELR 257
Query: 185 -------------------------AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
A D+ K +HG P+ +Y ++ A+C D
Sbjct: 258 GSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQT 317
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
Y + N+M +G P+V +Y I+M L + + A+D+ + + G PD Y +L+
Sbjct: 318 VYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIY 377
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
L R +L +A ++ +M++ G P + +NT++ C +A +A K+L M C P
Sbjct: 378 ILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKP 437
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++ +Y L+ C + V + + M K +P FS L+ C GK ++C L
Sbjct: 438 DIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFL 497
Query: 400 EELLKAGEAPHEDTWVMIVPQI 421
EE++ G AP ++T+ ++ ++
Sbjct: 498 EEMVLKGFAPKKETFDLVAEKL 519
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G L + + +MR + A FNKM + GV+ D + +L+ LC++ V RA
Sbjct: 190 GGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRA 249
Query: 256 VDLLEDMLNKGFVP-DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
+++ +G VP D S+ TL++ C+ + + EA ++ M+ G P ++ Y +++
Sbjct: 250 RGAFQEL--RGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIE 307
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+C E +L +M S GC PN+++Y ++ L G A + G +P
Sbjct: 308 AYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAP 367
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
S ++LI G++++A V++++ G P T+ ++ C + E L
Sbjct: 368 DASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAEN---AL 424
Query: 435 NEIVKVE 441
+VK+E
Sbjct: 425 KMLVKME 431
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 14/278 (5%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
S++ L+ +A+ + D++ + E + PS+ TY LI+ Y
Sbjct: 265 SSFNTLVHGWCKARMMNEARDMMKEM--EEHGFKPSVITYTSLIEAYCMEKDFQTVYAIL 322
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHR----NYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
M C P N I +V H + A D+F G P+ YN ++
Sbjct: 323 NEMRSKGCPP-----NVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIY 377
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
G + A ++ +KM GV P V ++ L+ C SQ A+ +L M + P
Sbjct: 378 ILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKP 437
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D +YT LL C+++ ++ L+C M K PD Y +V CR G+ +C L
Sbjct: 438 DIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFL 497
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
E+M G P ++ LV D+ AKK +QL+
Sbjct: 498 EEMVLKGFAPKKETF-DLVAEKLDKANLHSAKKKIQLL 534
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFN 214
++ +C P+ + ++L + AF F A + G + SYN M+
Sbjct: 114 VIAMDCCPVRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKF 173
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ + L ++M E G + + + +M+ L S+ A+D M G V DT +
Sbjct: 174 KQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAM 233
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
LL++LC+++ ++ A ++ PD +NT+V G+C+ +A ++++M
Sbjct: 234 NVLLDTLCKERSVKRARGAFQELR-GSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEE 292
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+G P++++Y +L+ C + F + M SKG P+ ++ G+ E
Sbjct: 293 HGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQE 352
Query: 395 ACGVLEELLKAGEAP 409
A + +++ G AP
Sbjct: 353 ALDIFDKVRGDGCAP 367
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 160/310 (51%), Gaps = 3/310 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LIK + + D A+ + + + C+ N IL L + ++ A
Sbjct: 239 PDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWM-DAMK 297
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + + G P+ ++NI++ C G + A + M + G P+ S+ L+QG C
Sbjct: 298 LLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 357
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++RA++ LE M+++G PD ++Y LL +LC+ K+ +A +L ++ KGC+P ++
Sbjct: 358 NRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 417
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNTV+ G + G+A A ++LE+M G P+L++ ++VGGL +G A K+ +
Sbjct: 418 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYL 477
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ + ++++ G C + A L +++ G P E ++ ++ I
Sbjct: 478 KGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLA 537
Query: 428 EKLGEVLNEI 437
E+ ++ NE+
Sbjct: 538 EEASKLSNEL 547
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 168/342 (49%), Gaps = 7/342 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GR K + I IL + + + + LI Y +S + AL R + + P
Sbjct: 116 KIGRTKNATRIMGIL---EESGAVIDANSYNVLINAYCKSGEIEEAL---RVLDHTSVAP 169
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +L L R L+ A + + P+ + +++ A C + A L
Sbjct: 170 NAATYDAVLCSLC-DRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 228
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
FN+M +G PDV +Y +L++G C++ +++ A+ L+ + + G D +S+ +L SLC
Sbjct: 229 FNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCS 288
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ +A KLL M KGC P +V +N ++ C++G A VLE MP +G PN S
Sbjct: 289 GGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 348
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+ L+ G C++ D A +++++M+S+G P + L+ C GKVD+A +L +L
Sbjct: 349 FNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 408
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G +P ++ ++ + + E E+L E+ +K D
Sbjct: 409 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 450
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 5/298 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+H V P+ TY ++ + +A++ L+ C P +++ +
Sbjct: 163 DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDA-TCKESG 221
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A LF G P+ +YN++++ FC G + A K+ G DV S+ +
Sbjct: 222 VGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNM 281
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ LC + A+ LL ML KG P +++ L+N LC+K L +A +L M G
Sbjct: 282 ILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 341
Query: 302 CNPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
P+ +N ++ GFC + ID A + LE M S GC P++V+Y L+ LC G D A
Sbjct: 342 HTPNSRSFNPLIQGFCNR-KGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 400
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + SKG SP + +I G VGK + A +LEE+ G P T +V
Sbjct: 401 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 458
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 32/275 (11%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG---------- 245
G +P+ + ++R FC G A + + E G + D SY +L+
Sbjct: 99 GKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA 158
Query: 246 ----------------------LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
LC + ++ +A+ +L+ L PD ++ T L+++ C+
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ + +A KL M+ KGC PD+V YN ++ GFC+EGR +A L+ +PS GC +++S
Sbjct: 219 ESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVIS 278
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+ ++ LC G + A K + M+ KG P + LI C G + +A VLE +
Sbjct: 279 HNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMP 338
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
K G P+ ++ ++ C + +++ E L +V
Sbjct: 339 KHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG++ M +G +PDV + L++ C+ + A ++ + G V D S
Sbjct: 82 NGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANS 141
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+N+ C+ ++ EA ++L V P+ Y+ V+ C G+ A +VL+
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTSVA---PNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ C P++V+ L+ C + A K M KG P + LIKGFC G++D
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD 258
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
EA L++L G + MI+ +C+G
Sbjct: 259 EAIIFLKKLPSYGCQSDVISHNMILRSLCSG 289
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G + ++++ M +KG P ALI+ FC +G+ A ++ L ++G ++
Sbjct: 82 NGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANS 141
Query: 414 WVMIVPQICAGEEMEKLGEVLNE 436
+ +++ C E+E+ VL+
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDH 164
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 174/364 (47%), Gaps = 34/364 (9%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN------- 169
IL + S + + P FT +I ++ + AL+ R ML N +P L
Sbjct: 475 ILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLC 534
Query: 170 -------------RILE------LLVTH--------RNYLRPAFDLFKSAHKHGVLPNTK 202
R+LE L+ T+ ++ A L K + G + +
Sbjct: 535 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 594
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ C G + + L +M ++G+ PD +Y +L+ G+CR +++ AV+L +
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++ VP+ +Y +++ C+ K+ E KL + + + V YNT++ +CR G
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
++A K+ +DM S G P +Y +L+ G+C+ G + AK + M +G P+ AL
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 774
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I G+C +G++D+ VL+E+ P++ T+ +++ +M+ ++L+E+V I
Sbjct: 775 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 834
Query: 443 KGDT 446
DT
Sbjct: 835 VPDT 838
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 145/297 (48%), Gaps = 35/297 (11%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF K GV PN +YN ++ C +G++ A+ KM + GV + +Y +L+
Sbjct: 332 AIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLIN 391
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL + + N A +L++ L KGF P+ + Y TL++ C+ L +A ++ M KG NP
Sbjct: 392 GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINP 451
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNG---------------CL----------- 338
+ V N+++ GFC+ G+ A +LE+M S G C+
Sbjct: 452 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFL 511
Query: 339 ---------PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
PN TLVGGLC +G A + ++ KGF + ++ALI G C
Sbjct: 512 REMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKT 571
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
G + EA +L+++L+ G + T+ ++ C ++E+ ++ E+VK I+ DT
Sbjct: 572 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 628
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 203/466 (43%), Gaps = 41/466 (8%)
Query: 10 SKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLI 69
++ +T VT A PP S + PSS +S S +P + ++LI
Sbjct: 86 ARPLTCVTSAAPHPPSP-------LPSQNQPPSSDHALLKSVTSILSNPSLDSTQCKQLI 138
Query: 70 ASQS---------------DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
S +P A F +AS FR + +Y +L+ L + + S
Sbjct: 139 PHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPA 198
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+LI L PV LF + +R ++ +M + N ++L
Sbjct: 199 RLLLIRLIDRKLPV---LF---------GDPKNRHIEIASAMADLNEVGESGVAVAAVDL 246
Query: 175 LV-----THRNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
L+ RN R A +F+ GV P K+ ++ + ++ +Y +F M
Sbjct: 247 LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM- 305
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+GV PDV + + C+ +V A+ L DM G P+ ++Y L++ LC+ L
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA++ +M G N ++ Y+ ++ G + + +A VL++ G PN V Y TL+
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C G A + M+SKG +P+ +++I+GFC +G++++A +LEE+L G +
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ + I+ +C E L E++ ++ + ++ +G
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 531
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L K G+ P+T +YN+++ C G + A L+N+ R ++P+V +Y +++
Sbjct: 612 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++ L ++L + +++ Y TL+ + CR EA+KL M+ KG P
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 731
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
Y++++ G C GR DA ++++M G LPN+V Y L+GG C G D +
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 791
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
Q M S P+ +I G+ G + A +L E++ G P T+ ++ C
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851
Query: 425 EEMEKLGEVLNE 436
++E+ G++L E
Sbjct: 852 GKIEE-GKLLAE 862
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D I + E V+P++ TY LI + D A + M++ + ++
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L+ + A + K + G PN YN ++ +C G++ A + M +G+
Sbjct: 391 NGLMKLEKF-NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P+ + ++QG C+ Q+ +A +LE+ML++GF + ++TT+++ LC + A +
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L M ++ P+ T+V G C+EG+ DA ++ + G NLV+ L+ GLC
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 569
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A + ++ M+ +GF + LI G C GKV+E + E++K G P
Sbjct: 570 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629
Query: 413 TWVMIVPQICAGEEMEKLGEVLNE 436
T+ +++ +C ++++ + NE
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNE 653
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN+ + N +++ FC G + A + +M RG + ++ ++ LC S+ A
Sbjct: 448 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESA 507
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L +ML + P+ TTL+ LC++ K +A +L R+ KG ++V N ++ G
Sbjct: 508 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 567
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ G +A ++L+ M G + + ++Y TL+ G C +G + K M+ +G P
Sbjct: 568 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 627
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G C +GK+DEA + E P+ T+ +++ C +++E+ ++
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 687
Query: 436 EIV 438
E++
Sbjct: 688 ELL 690
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 3/206 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+++TY +I Y +++ + K F +L N + N ++ + N + A
Sbjct: 659 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE-A 717
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L G+ P T +Y+ ++ C G + A L ++M + G++P+V Y L+ G
Sbjct: 718 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 777
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ Q+++ V++L++M + P+ ++YT +++ + ++ A KLL M KG PD
Sbjct: 778 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 837
Query: 306 IVHYNTVVLGFCREGRAIDACKVLED 331
V YN + GFC+EG+ + + ED
Sbjct: 838 TVTYNVLTNGFCKEGKIEEGKLLAED 863
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 174/364 (47%), Gaps = 34/364 (9%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN------- 169
IL + S + + P FT +I ++ + AL+ R ML N +P L
Sbjct: 408 ILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLC 467
Query: 170 -------------RILE------LLVTH--------RNYLRPAFDLFKSAHKHGVLPNTK 202
R+LE L+ T+ ++ A L K + G + +
Sbjct: 468 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 527
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ C G + + L +M ++G+ PD +Y +L+ G+CR +++ AV+L +
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++ VP+ +Y +++ C+ K+ E KL + + + V YNT++ +CR G
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
++A K+ +DM S G P +Y +L+ G+C+ G + AK + M +G P+ AL
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I G+C +G++D+ VL+E+ P++ T+ +++ +M+ ++L+E+V I
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767
Query: 443 KGDT 446
DT
Sbjct: 768 VPDT 771
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 145/297 (48%), Gaps = 35/297 (11%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF K GV PN +YN ++ C +G++ A+ KM + GV + +Y +L+
Sbjct: 265 AIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLIN 324
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GL + + N A +L++ L KGF P+ + Y TL++ C+ L +A ++ M KG NP
Sbjct: 325 GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINP 384
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNG---------------CL----------- 338
+ V N+++ GFC+ G+ A +LE+M S G C+
Sbjct: 385 NSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFL 444
Query: 339 ---------PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
PN TLVGGLC +G A + ++ KGF + ++ALI G C
Sbjct: 445 REMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKT 504
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
G + EA +L+++L+ G + T+ ++ C ++E+ ++ E+VK I+ DT
Sbjct: 505 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 204/470 (43%), Gaps = 41/470 (8%)
Query: 6 FLRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRV 65
F ++ +T VT A PP S + PSS +S S +P +
Sbjct: 15 FCPIARPLTCVTSAAPHPPSP-------LPSQNQPPSSDHALLKSVTSILSNPSLDSTQC 67
Query: 66 QKLIASQS---------------DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
++LI S +P A F +AS FR + +Y +L+ L + +
Sbjct: 68 KQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGF 127
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
S +LI L PV LF + +R ++ +M + N
Sbjct: 128 VSPARLLLIRLIDRKLPV---LF---------GDPKNRHIEIASAMADLNEVGESGVAVA 175
Query: 171 ILELLV-----THRNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
++LL+ RN R A +F+ GV P K+ ++ + ++ +Y +F
Sbjct: 176 AVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
M +GV PDV + + C+ +V A+ L DM G P+ ++Y L++ LC+
Sbjct: 236 ETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKH 294
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L EA++ +M G N ++ Y+ ++ G + + +A VL++ G PN V Y
Sbjct: 295 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 354
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
TL+ G C G A + M+SKG +P+ +++I+GFC +G++++A +LEE+L
Sbjct: 355 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 414
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
G + + + I+ +C E L E++ ++ + ++ +G
Sbjct: 415 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 464
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 122/245 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L K G+ P+T +YN+++ C G + A L+N+ R ++P+V +Y +++
Sbjct: 545 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 604
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++ L ++L + +++ Y TL+ + CR EA+KL M+ KG P
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 664
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
Y++++ G C GR DA ++++M G LPN+V Y L+GG C G D +
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 724
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
Q M S P+ +I G+ G + A +L E++ G P T+ ++ C
Sbjct: 725 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784
Query: 425 EEMEK 429
++E+
Sbjct: 785 GKIEE 789
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 115 DDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D I + E V+P++ TY LI + D A + M++ + ++
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 323
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L+ + A + K + G PN YN ++ +C G++ A + M +G+
Sbjct: 324 NGLMKLEKF-NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P+ + ++QG C+ Q+ +A +LE+ML++GF + ++TT+++ LC + A +
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L M ++ P+ T+V G C+EG+ DA ++ + G NLV+ L+ GLC
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC 502
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A + ++ M+ +GF + LI G C GKV+E + E++K G P
Sbjct: 503 KTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562
Query: 413 TWVMIVPQICAGEEMEKLGEVLNE 436
T+ +++ +C ++++ + NE
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNE 586
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN+ + N +++ FC G + A + +M RG + ++ ++ LC S+ A
Sbjct: 381 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESA 440
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L +ML + P+ TTL+ LC++ K +A +L R+ KG ++V N ++ G
Sbjct: 441 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 500
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ G +A ++L+ M G + + ++Y TL+ G C +G + K M+ +G P
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 560
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G C +GK+DEA + E P+ T+ +++ C +++E+ ++
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620
Query: 436 EIV 438
E++
Sbjct: 621 ELL 623
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 117/225 (52%), Gaps = 3/225 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+++TY +I Y +++ + K F +L N + N ++ + N + A
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE-A 650
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L G+ P T +Y+ ++ C G + A L ++M + G++P+V Y L+ G
Sbjct: 651 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 710
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ Q+++ V++L++M + P+ ++YT +++ + ++ A KLL M KG PD
Sbjct: 711 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
V YN + GFC+EG+ + K+ + M G + ++Y TLV G
Sbjct: 771 TVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 144/259 (55%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N ++ A + + + G++P+ SY ++ C G+I A L KM E G + +Y
Sbjct: 111 NKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTY 170
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L++GLC+ +N+++ LL+ ++ KG VP+ +++ LL + +++ + EA KLL +
Sbjct: 171 NSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIA 230
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P++V YN ++ G C+EGR +A + D+PS G PN+VS ++ LC +G ++
Sbjct: 231 KGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEE 290
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M S+ SP + LI + G++ A VL+E+++A P T+ I+
Sbjct: 291 ANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIIS 350
Query: 420 QICAGEEMEKLGEVLNEIV 438
+C + + + + L++++
Sbjct: 351 HLCKEGKADLVVKCLDQMI 369
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 157/369 (42%), Gaps = 39/369 (10%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCK 162
G K+ +L + + K + P+ FT+ L Y E + D A+K ++ K
Sbjct: 176 GLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGV-DEAMKLLDGIIAKGGK 234
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +L L A F+ G PN S NI++R+ C G A
Sbjct: 235 PNLVSYNVLLTGLCKE-GRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANE 293
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
L +M P + +Y IL+ L ++ A +L++M+ F P ++ +++ LC
Sbjct: 294 LVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLC 353
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNT------------------------------- 311
++ K K L +M CNP+ +N
Sbjct: 354 KEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDF 413
Query: 312 ---VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
V+ CR+G A ++L +M +G +P+ +Y +L+ GLC +GM D A + +L+
Sbjct: 414 YRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLE 473
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+ P +ALI GFC G+ D + + E ++ G P+E T+ ++V I EE E
Sbjct: 474 ENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKE 533
Query: 429 KLGEVLNEI 437
EVL E+
Sbjct: 534 LAAEVLKEL 542
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++N A LE ++ KG PD T LL LC+ K+++A +++ G PD
Sbjct: 74 RDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAA 133
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +V C+ G A +++E M NGC N V+Y +LV GLC G + + + + +
Sbjct: 134 SYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKL 193
Query: 368 ISKGFSPH-FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ KG P+ F+ S L + G VDEA +L+ ++ G P+ ++ +++ +C
Sbjct: 194 MRKGLVPNEFTHSFLLEAAYKERG-VDEAMKLLDGIIAKGGKPNLVSYNVLLTGLC 248
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF L + G +P+ +Y+ ++R C G + A +F + E P + ++ L+
Sbjct: 429 PAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALI 488
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ + + ++++ E M+ KG+ P+ +YT L+ + +++ A ++L + ++
Sbjct: 489 LGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIR--- 545
Query: 304 PDIVHYNTV 312
++ NTV
Sbjct: 546 -QVMRRNTV 553
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 44/383 (11%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD----ILIT 120
V ++ P A + F + R +H T++ +I LGR +S+++ +L
Sbjct: 118 VYNVLHGARKPDHALQFFRWVERAGLIQHDRETHMKIIQILGR---YSMLNHARCIVLED 174
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + + + +F LI Y ++ + ++K F M E
Sbjct: 175 MPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKEL--------------------- 213
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
GV + KSYN + + G +A FNKM + G+ P +Y
Sbjct: 214 ---------------GVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYN 258
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+L+ G ++ AV EDM +G PD ++Y T++N R K++ EA KL MK K
Sbjct: 259 VLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAK 318
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
P ++ Y T++ G+ R D ++LE+M S G PN V+Y TL+ LCD G A
Sbjct: 319 DIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEA 378
Query: 361 KKYMQLMISKGFSP-HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
K ++ M+ + +P S+ L+ C G + A VL+ ++K + +++
Sbjct: 379 KDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIE 438
Query: 420 QICAGEEMEKLGEVLNEIVKVEI 442
C EE ++ + ++++++ +I
Sbjct: 439 NFCKAEEYDQAVKFVDKLIENDI 461
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
L+ A D+ K + Y +++ FC + A +K+ E ++ +S
Sbjct: 411 LKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLE 470
Query: 239 -----YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
Y ++Q LC Q +A L +L KG V D L++ L+ ++ A+++
Sbjct: 471 MESGAYNPVIQYLCSHGQTGKAEILFRQLLKKG-VEDPLAFNNLICGHAKEGTPDSAFEI 529
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M KG D Y ++ + R+G DA L+ M +G LP+ +R+++ L +
Sbjct: 530 LKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYE 589
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
G A + M+ M+ KG + + +++ G +EA G ++ L+ +
Sbjct: 590 DGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSS 641
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 144/337 (42%), Gaps = 13/337 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
AK+I R+ NS +L L+ +A D+L + P + LI
Sbjct: 378 AKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLI 437
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQ--------LNRILELLVTHRNYLRPAFDLF 189
+ + ++ D+A+K ++E + P+ N +++ L +H + LF
Sbjct: 438 ENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEI-LF 496
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ K GV + ++N ++ G A+ + M +G+ D ++YR+L++ RK
Sbjct: 497 RQLLKKGV-EDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRK 555
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A L+ M+ G +PD+ + +++ SL +++ A +++ M KG ++
Sbjct: 556 GEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLV 615
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
++ G +A ++ + S+ C V++ +L+ L ++G A K + +
Sbjct: 616 AKILEALLMRGHEEEALGRIDLLMSSQC---NVNFDSLLSILSEKGKTIAALKLLDFGLQ 672
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ F ++ GK A +L ++++ G
Sbjct: 673 RDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKG 709
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 180/381 (47%), Gaps = 8/381 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V +++ ++P L + F + + + HS TY +L+ L +A + + +
Sbjct: 74 TPSHVLEVVKRFNNPNLGFKFFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDS 133
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NRILELLVT 177
++S+ L +L+ +A L DR + + E C + + N L +L+
Sbjct: 134 MRSDGQLPDSRLLGFLVSSFA---LADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIK 190
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N L A LF+ + + ++NI++R C GD+ A+ L M G PD+
Sbjct: 191 H-NRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIV 249
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y IL+ GLCR QV+RA DLLE++ L F P+ +SYTT+++ CR K+ EA L
Sbjct: 250 TYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYE 309
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M G P++ ++ +V GF + G A + + + +GC PN+++ +L+ G C G
Sbjct: 310 MVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGW 369
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ + M ++ + LI C ++ EA +L L ++ P +
Sbjct: 370 VNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNP 429
Query: 417 IVPQICAGEEMEKLGEVLNEI 437
++ C +++ ++ E+
Sbjct: 430 VIDGYCKSGNIDEANAIVAEM 450
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 14/327 (4%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E ++ S +TY L++ ++ L + A + SM LP +R+L LV+
Sbjct: 100 ERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDG--QLPD--SRLLGFLVSSFA- 154
Query: 182 LRPAFD----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
L FD L A GV + YN + + + A LF ++ D
Sbjct: 155 LADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAF 214
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ IL++GLC V+ A +LL DM + G PD ++Y LL+ LCR ++ A LL +
Sbjct: 215 TFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEV 274
Query: 298 KVKGCN--PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+K C P++V Y TV+ G+CR + +A + +M +G PN+ ++ LV G G
Sbjct: 275 CLK-CEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAG 333
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + ++ G +P+ +LI G+C G V+ + E+ + T+
Sbjct: 334 DMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYS 393
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEI 442
+++ +C +++ +L + + +I
Sbjct: 394 VLISALCKSNRLQEARNLLRILKQSDI 420
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 5/262 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDIL--ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
TY IL+ L R D+L + LK E P S +T +I Y + D A F
Sbjct: 250 TYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVS-YTTVISGYCRLSKMDEASSLFY 308
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ KP + +++ V + + A + K HG PN + ++ +C
Sbjct: 309 EMVRSGTKPNVFTFSALVDGFVKAGD-MASALGMHKKILFHGCAPNVITLTSLINGYCRA 367
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G ++ L+ +M R + ++ +Y +L+ LC+ +++ A +LL + VP Y
Sbjct: 368 GWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVY 427
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+++ C+ + EA ++ M+ K C PD + + +++G C +GR +A + M +
Sbjct: 428 NPVIDGYCKSGNIDEANAIVAEMEEK-CKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLA 486
Query: 335 NGCLPNLVSYRTLVGGLCDQGM 356
+GC P+ ++ RTL L GM
Sbjct: 487 SGCTPDDITIRTLSSCLLKSGM 508
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G PN +++ ++ F GD++ A + K+ G P+V + L+
Sbjct: 303 ASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLIN 362
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR VN +DL +M + + +Y+ L+++LC+ +L+EA LL +K P
Sbjct: 363 GYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVP 422
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
YN V+ G+C+ G +A ++ +M C P+ +++ L+ G C +G A
Sbjct: 423 LAFVYNPVIDGYCKSGNIDEANAIVAEMEEK-CKPDKLTFTILIIGHCMKGRTPEAIGIF 481
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
M++ G +P L G EA + E L + E+
Sbjct: 482 YKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKETLFENQES 525
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY IY L A M+ N P N ++ L N ++ A
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN-VKEA 239
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L K G+ P +Y+ +M +C G++ A +F+ M + GV P+V SY I++ G
Sbjct: 240 KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V+ A++LL +ML+K VPDT++Y +L++ LC+ ++ A L+ M +G D
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y +++ C+ A + M G P + +Y L+ GLC G A++ Q
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ KG +I G C G DEA + ++ G P+ T+ +I+ + +
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479
Query: 426 EMEKLGEVLNEIV 438
E +K ++L+E++
Sbjct: 480 ENDKAEKLLHEMI 492
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 143/276 (51%), Gaps = 1/276 (0%)
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+ N+IL L + YL A L K G+ N + NI++ FC G ++ ++++ K
Sbjct: 12 EFNKILGSLAKMKQYL-TAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGK 70
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ + G PD + LM+GLC K +V +++ + ++ +GF D +SY TLLN LC+ +
Sbjct: 71 ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGE 130
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
R A KLL ++ + P++V YNT++ G C++ +A + +M + G P+ ++Y T
Sbjct: 131 TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTT 190
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C G A + MI K +P + + LI C G V EA +L + K G
Sbjct: 191 LIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
P T+ ++ C E++ ++ + +V++ +
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV 286
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + PN YN ++ C + ++ AY L+++M RG+ PD +Y L
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q+ A LL++M+ K P Y L+N+LC++ ++EA LL M +G
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P +V Y+T++ G+C G +A ++ M G PN+ SY ++ GLC D A
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M+ K P ++LI G C G++ A ++ E+ G+ T+ ++ +C
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371
Query: 423 AGEEMEK 429
+ ++K
Sbjct: 372 KNQNLDK 378
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 6/254 (2%)
Query: 190 KSAHKH------GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
KS H H G + SY ++ C G+ A L + +R P+V Y ++
Sbjct: 98 KSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTII 157
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ VN A DL +M +G PD ++YTTL+ C +L A+ LL M +K N
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN 217
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P + YN ++ C+EG +A +L M G P +V+Y TL+ G C G AK+
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI 277
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M+ G +P+ + +I G C +VDEA +L E+L P T+ ++ +C
Sbjct: 278 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 337
Query: 424 GEEMEKLGEVLNEI 437
+ ++NE+
Sbjct: 338 SGRITSALNLMNEM 351
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R + + + +P N I++ L + + A+DL+ G+ P+ +Y ++
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDK-LVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A++L ++M + + P V Y IL+ LC++ V A +LL M +G
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P ++Y+TL++ C +++ A ++ M G NP++ YN ++ G C+ R +A +
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 312
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L +M +P+ V+Y +L+ GLC G A M M +G +L+ C
Sbjct: 313 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+D+A + ++ + G P T+ ++ +C G ++ E+ ++
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++++Y I I + D A+ R ML N P N +++ L + A
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL-CKSGRITSA 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L H G + +Y ++ A C N ++ A LF KM ERG+ P + +Y L+ G
Sbjct: 345 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A +L + +L KG D +YT +++ LC++ EA + +M+ GC P+
Sbjct: 405 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V + ++ + A K+L +M + G L ++ ++ V + Q D A+K +
Sbjct: 465 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL--VLDFK--VADVFVQNENDKAEKLLH 520
Query: 366 LMISKGF 372
MI+KG
Sbjct: 521 EMIAKGL 527
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A +L +M +G+ + + IL+ C Q+ + +L +L G+ PDT++ TL+
Sbjct: 29 AISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 88
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC K +++++ ++ +G D V Y T++ G C+ G A K+L + P
Sbjct: 89 GLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 148
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V Y T++ GLC + + A M ++G P LI GFC +G++ A +L
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLL 208
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+E++ P + +++ +C +++ +L + K IK
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P + + ++ L + Q A+ L + M KG + ++ L+N C ++ ++ +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L ++ G PD + NT++ G C +G + + + + G + VSY TL+ GLC
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A K ++++ + P+ + + +I G C V+EA + E+ G P T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIV 438
+ ++ C ++ +L+E++
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMI 212
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 139/247 (56%), Gaps = 7/247 (2%)
Query: 204 YNIMMRAFCFNGDISIAYTLF-NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
YNI++++ C G+ + A +F +M GV P + +Y ++ GLC+ +++ ++L E++
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ +G PD ++Y TL++SLC+ L EA +L M +GC P++V Y+ ++ G C+ GR
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 323 IDACKVLEDMPSNGC--LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF--SPHFSV 378
+A +++++M C LPN+++Y + + GLC Q M A + M+ + SP
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI G C G+ DEAC ++++ G P+ T+ +V +C ++ME+ ++ +V
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 439 KVEIKGD 445
+ D
Sbjct: 286 DKGVTPD 292
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 163/315 (51%), Gaps = 9/315 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL--NRILELLVTHRNYLRPA 185
P++ TY LI + D A + + M +C LP + N L+ L ++ A
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC-KQSMTAEA 207
Query: 186 FDLFKSAHKHG--VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
+L +S V P+T +++ ++ C G A + M G +P+V +Y L+
Sbjct: 208 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALV 265
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ ++ RA ++E M++KG PD ++Y+ L+++ C+ ++ EA +LL M +GC
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V +N+++ G C+ R+ +A ++ + + +P+ V++ L+ G C G F+ A
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASAL 385
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M++K P ALI G C G+V+ A +L+ + G P+ T+ ++V +C
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445
Query: 424 GEEMEKLGEVLNEIV 438
+E+ E L E+V
Sbjct: 446 SGRIEEPCEFLEEMV 460
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 127/227 (55%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G +PN +YN ++ C + A+ + M ++GV PDV +Y +L+ C+ S+V+ A
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++LL M ++G P+ +++ ++++ LC+ + EA+++ ++ + PD V +N ++ G
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ G A + E+M + P+++++ L+ GLC G + A+ + LM + G P+
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ L+ G C G+++E C LEE++ +G P T+ +V +C
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALC 479
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 139/257 (54%), Gaps = 9/257 (3%)
Query: 185 AFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A ++F+ + GV P +YN ++ C + ++ LF ++ +RG PDV +Y L+
Sbjct: 64 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLI 123
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ + A L M ++G VP+ ++Y+ L+N LC+ ++ EA +L+ M K C+
Sbjct: 124 DSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 183
Query: 304 --PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL---PNLVSYRTLVGGLCDQGMFD 358
P+I+ YN+ + G C++ +AC+++ + +G L P+ V++ TL+ GLC G D
Sbjct: 184 VLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTD 242
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A MI+ G+ P+ +AL+ G C K++ A ++E ++ G P T+ ++V
Sbjct: 243 EACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 300
Query: 419 PQICAGEEMEKLGEVLN 435
C +++ E+L+
Sbjct: 301 DAFCKASRVDEALELLH 317
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 3/288 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP + TY L+ + +++ D AL+ M C P N I++ L + A
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC-KSDRSGEA 347
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F + + ++P+ ++NI++ C G+ A LF +M + + PDV ++ L+ G
Sbjct: 348 FQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDG 407
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ QV A D+L+ M N G P+ ++Y L++ LC+ ++ E + L M GC P+
Sbjct: 408 LCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++V CR R DA +++ + S G P+ V+Y LV GL G + A ++
Sbjct: 468 SMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 527
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
M+ KG P A G G + +L +L G P T
Sbjct: 528 EMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 3/287 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY L+ +++ +RA SM++ P + +++ + + A +
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC-KASRVDEALE 314
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G PN ++N ++ C + A+ + +++ R ++PD ++ IL+ G C
Sbjct: 315 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGAC 374
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +A L E+M+ K PD +++ L++ LC+ ++ A +L M G P++V
Sbjct: 375 KAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 434
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN +V G C+ GR + C+ LE+M S+GC+P ++Y +LV LC D A + + +
Sbjct: 435 TYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL 494
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
S G+ P + L+ G GK ++A VLEE++ G P T+
Sbjct: 495 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 39/336 (11%)
Query: 148 RALKTFRS-MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
RAL+ FR M P N I+ L N L +LF+ K G P+ +YN
Sbjct: 63 RALEIFRGEMARDGVAPTIVTYNTIINGLC-KSNELGAGMELFEELVKRGHHPDVVTYNT 121
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + C GD+ A L M RG +P+V +Y +L+ GLC+ +++ A +L+++M K
Sbjct: 122 LIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 181
Query: 267 --FVPDTLSYTTLLNSLCRKKKLREAYKLL--------------------------CRMK 298
+P+ ++Y + L+ LC++ EA +L+ C
Sbjct: 182 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT 241
Query: 299 VKGCN---------PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
+ CN P++V YN +V G C+ + A ++E M G P++++Y LV
Sbjct: 242 DEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 301
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C D A + + M S+G +P+ +++I G C + EA + ++ P
Sbjct: 302 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVP 361
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ T+ +++ C E+ + E+V ++ D
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPD 397
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 125/254 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + +S GV P+ +Y++++ AFC + A L + M RG P+V ++ ++
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + A + + N+ VPD +++ L+ C+ +A L M K P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ + ++ G C+ G+ A +L+ M + G PN+V+Y LV GLC G + +++
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFL 456
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G P +L+ C + D+A ++ +L G P T+ ++V +
Sbjct: 457 EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516
Query: 425 EEMEKLGEVLNEIV 438
+ E+ VL E+V
Sbjct: 517 GKTEQAITVLEEMV 530
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 5/185 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALKTFR 154
T+ LI L +A DIL + + P P++ TY + ++ +S + +
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVP--PNVVTYNVLVHGLCKSGRIEEPCEFLE 457
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ C P ++ L + A L G P+T +YNI++ +
Sbjct: 458 EMVSSGCVPESMTYGSLVYALC-RASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G A T+ +M +G PD ++ GL R + ++LL +L KG +PD +
Sbjct: 517 GKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTC 576
Query: 275 TTLLN 279
+++L+
Sbjct: 577 SSILD 581
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 4/257 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI D A+ M+ + +P N ++ ++ + A +
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT-VNEAIN 319
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF K GV PN +Y ++ A+C +G + A+ L+N M +RG+ P+V +Y L+ GLC
Sbjct: 320 LFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLC 379
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
RK V A L+ +M++K D ++Y L++SLC+K + R+A KLL M KG NP V
Sbjct: 380 RKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHV 439
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G+CREG A V M G N+V++ L+ G C +G + A + M
Sbjct: 440 TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499
Query: 368 ISKGFSPHFSVSHALIK 384
+ +G P+ ++ +IK
Sbjct: 500 LERGLVPN-RTTYEIIK 515
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 125/235 (53%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K G+ PN +YNI++ FC + ++S A +F +M +G+ P+V +Y IL+ GLC
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V+ AV L + M++ P+ +++ L+N C+ K + EA L M+ +G +P+ +
Sbjct: 275 SDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAM 334
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T++ +C++GR DA + M G P + +Y L+ GLC +G A+ M M
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+SK S + LI C G+ +A +L+E+ + G P T+ ++ C
Sbjct: 395 VSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYC 449
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 167/341 (48%), Gaps = 14/341 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT---FRSMLE 158
KL RA +I+D+ + + V+P++ TY LI Y + + K + M+
Sbjct: 170 KLNRAG--DVIEDMKV------WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA 221
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
P N +++ N + A +F + G+ PN +YNI++ C +G +
Sbjct: 222 KGICPNEVTYNILIDGFCKDEN-VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L ++M + P+V ++ +L+ G C+ VN A++L DM +G P+ ++YTTL+
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++ C+ ++ +A+ L M +G P++ YN ++ G CR+G A ++ +M S
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS 400
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
++V+Y L+ LC +G A K + M KG +P + L+ G+C G + A V
Sbjct: 401 ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIV 460
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ + G+ + T +++ C +E +LNE+++
Sbjct: 461 RTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 190/423 (44%), Gaps = 25/423 (5%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL------ 118
+Q+L+ S +DP L F ++ ++ HS ++ L K +S I L
Sbjct: 2 LQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKY 61
Query: 119 ------------ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
I++ + + V L L+ + + R + F+ ++ K
Sbjct: 62 EKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLI 121
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +L LV F +++ K + N S+NI++ C G ++ A +
Sbjct: 122 SCNPLLSGLVKESENGDMEF-VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIED 180
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNR---AVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M GV P+V +Y L+ G C+ ++ + A +L++M+ KG P+ ++Y L++ C+
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ + A ++ M+ +G P++V YN ++ G C +G+ +A + + M S+ PN+V+
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+ L+ G C + A M +G P+ LI +C G++++A + ++
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKT 463
G P T+ ++ +C +++ ++NE+V ++ D +V I L D L K
Sbjct: 361 DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD--VVTYNI-LIDSLCKKG 417
Query: 464 RSR 466
SR
Sbjct: 418 ESR 420
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKL---GRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A +F RQ R + TY ILI L G+ + D +++ E VT ++
Sbjct: 247 AMRVFGEMQRQ-GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV-- 303
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
LI + ++ + A+ F M + P +++ + AF L+
Sbjct: 304 -LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD-GRMEDAFALYNMMID 361
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ P +YN ++ C GD+ A +L N+M + + DV +Y IL+ LC+K + +
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
AV LL++M KG P ++Y TL++ CR+ LR A + RM+ KG ++V +N ++
Sbjct: 422 AVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK 481
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
GFC +GR DA +L +M G +PN +Y + + ++G
Sbjct: 482 GFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 17/175 (9%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
STY LI L R ++ + S+ + LI + +A+K
Sbjct: 369 STYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDE 428
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M E P N +++ N LR A + + G N ++N++++ FC G
Sbjct: 429 MFEKGLNPSHVTYNTLMDGYCREGN-LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKG 487
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+ A L N+M ERG++P+ +Y I+ E+M+ KGFVPD
Sbjct: 488 RLEDANGLLNEMLERGLVPNRTTYEIIK----------------EEMMEKGFVPD 526
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 36/370 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+ I + + ++ + ++ +I +A+ + M
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N ++ L H ++R A + A + + PN SY ++ FC G+
Sbjct: 1110 FASGCDPDIITFNTLITGLC-HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1168
Query: 217 ISIAYTLF-----------------------------------NKMFERGVMPDVESYRI 241
+ +A L KM ER V PDV Y +
Sbjct: 1169 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1228
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + A ++LE+ML K PD Y TL++ R + L +A K+ M+ KG
Sbjct: 1229 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1288
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV N ++ G+C+ G +A + +M GC+P+ +Y T++ G QG + A
Sbjct: 1289 VCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1348
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ MI + P+ +LI G+C G D A G+ + +P+ T+ +++ +
Sbjct: 1349 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 1408
Query: 422 CAGEEMEKLG 431
+++ + G
Sbjct: 1409 FKKDKVLRAG 1418
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 3/322 (0%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLN 169
F +DD L ++ T + L+ YA++ + +A + + E + P N
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
R+L+LLV R + A L+ + S +++R C + L +
Sbjct: 948 RLLKLLVEQRRW-DDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1006
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G +P V Y +L+ G CR+ + R + LL +M GF+P ++Y +L+N L +K L +
Sbjct: 1007 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEK 1066
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
L M+ +G +P++ YN+V+ C A A +L+ M ++GC P+++++ TL+
Sbjct: 1067 IGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLIT 1126
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC +G A+ +++ I + +P+ LI GFC G++ A +L E++ G P
Sbjct: 1127 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTP 1186
Query: 410 HEDTW-VMIVPQICAGEEMEKL 430
T+ +I + AG+ E L
Sbjct: 1187 DVVTFGALIHGLVVAGKVSEAL 1208
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQG 245
D +S G P ++ A+ G + A + ++ E+ G +P+V L++
Sbjct: 893 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKL 952
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + + A L ++ML K D S L+ LC ++++ E KL+ GC P
Sbjct: 953 LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1012
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+CR G +L +M +NG LP LV+Y +L+ L +G +
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1072
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +GFSP+ + +++I CN +A +L+++ +G P T+ ++ +C
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1132
Query: 426 EMEKLGEVLNEIVKVEI 442
+ K L E ++ E+
Sbjct: 1133 HVRKAEHFLREAIRREL 1149
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L +G LP +Y ++ GD+ +LF +M +RG P+V+ Y ++ LC
Sbjct: 1035 LLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALC 1094
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+A+ +L+ M G PD +++ TL+ LC + +R+A L + NP+ +
Sbjct: 1095 NCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 1154
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ GFC G + A +L +M G P++V++ L+ GL G A + M
Sbjct: 1155 SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 1214
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ P ++ + LI G C + A +LEE+L+ P E + ++ E +
Sbjct: 1215 TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 5/273 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
D+L+ + + TP + T+ LI + AL M E P N ++
Sbjct: 1174 DLLVEMMGRGH--TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 1231
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
L R L A ++ + + V P+ Y ++ F + ++ A +F M +GV
Sbjct: 1232 GLCKKR-MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVC 1290
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PD+ S +++G C+ ++ A+ + +M G +PD +YTT+++ ++ L A +
Sbjct: 1291 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1350
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
LC M + C P++V Y++++ G+C+ G A + +M + PN+V+Y L+G L
Sbjct: 1351 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 1410
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ A Y + M+ SP+ H L+ G
Sbjct: 1411 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 124/311 (39%), Gaps = 51/311 (16%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+++ LI + + A MLE N +P +++ + N L A +F+
Sbjct: 1224 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN-LGDARKIFE 1282
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
GV P+ S N M++ +C G +S A + M + G +PD +Y ++ G ++
Sbjct: 1283 FMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+N A+ L DM+ + P+ ++Y++L+N C+ A L M+ + +P++V Y
Sbjct: 1343 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 1402
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------------- 351
++ ++ + + A E M N C PN V+ LV GL
Sbjct: 1403 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1462
Query: 352 -------------------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
C M A + M KG+ P+
Sbjct: 1463 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1522
Query: 381 ALIKGFCNVGK 391
+L+ GFC+VGK
Sbjct: 1523 SLLYGFCSVGK 1533
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 59/261 (22%)
Query: 124 EHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
EH V P + + +IK Y + + A+ +M + C P ++ N
Sbjct: 1285 EHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1344
Query: 182 ---LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
LR D+ K K PN +Y+ ++ +C GD A LF M + P+V +
Sbjct: 1345 NGALRWLCDMIKRKCK----PNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVT 1400
Query: 239 YRILMQGLCRKSQVNRAVDLLEDM--------------LNKGFV---------------- 268
Y IL+ L +K +V RA E M L G
Sbjct: 1401 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSE 1460
Query: 269 --------------------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
P +Y ++ SLCR LREA RM KG P+ +
Sbjct: 1461 VHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 1520
Query: 309 YNTVVLGFCREGRAIDACKVL 329
+ +++ GFC G++++ +L
Sbjct: 1521 FLSLLYGFCSVGKSVNWRTIL 1541
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 164/342 (47%), Gaps = 2/342 (0%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F++AS Q FR S Y ++ G+ F + + +K+ + VT F L++ Y
Sbjct: 81 FNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYV 140
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
+ L A+ F M ++NCKP + ++ +L R + A + F S K P+
Sbjct: 141 RAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQ-AQEFFDSL-KDKFEPDV 198
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
Y ++R +C G+IS A +F +M G+ P+V +Y I++ LCR Q+ RA D+ +
Sbjct: 199 IVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAE 258
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML+ G P++++Y +L+ + + + ++ +MK GC PD V YN ++ C++
Sbjct: 259 MLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDEN 318
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA KV+ M GC PN ++ TL G + G + A + + M + +
Sbjct: 319 LEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNT 378
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
L+K F D + E+ + P+ +T+ +++ C
Sbjct: 379 LMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCG 420
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 3/311 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+ ILI L R + S + +LK + P ++T L++ + + A + F M
Sbjct: 166 AFSILISILCRERRASQAQEFFDSLKDKFEPDV-IVYTNLVRGWCRAGNISEAERVFGEM 224
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
KP + +++ L R A D+F G PN+ +YN +MR G
Sbjct: 225 KVAGIKPNVYTYSIVIDSLCRCGQITR-AHDIFAEMLDAGCQPNSITYNSLMRIHVKAGR 283
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++N+M G PD +Y L++ C+ + A+ ++ M KG P+ ++ T
Sbjct: 284 TEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNT 343
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L + + + A+++ +MK C + V YNT++ F K+ +M N
Sbjct: 344 LFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENK 403
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS-KGFSPHFSVSHALIKGFCNVGKVDEA 395
PN+ +Y+ L+ C G ++ A K+ + MI K P V +++ G++ +
Sbjct: 404 IEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKH 463
Query: 396 CGVLEELLKAG 406
++E+++ G
Sbjct: 464 EELVEKMVDRG 474
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 22/409 (5%)
Query: 61 SPCRVQK-LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
+P RV L+ Q D +L+ E F+ + T+ I++ L + F IL
Sbjct: 41 TPFRVNHILLKIQKDHVLSLEFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILR 100
Query: 120 TL---KSEHYP---------------VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
TL +S P +P +F L K YA N A F M ++
Sbjct: 101 TLLASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGF 160
Query: 162 KPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P + N L LL HR + A ++ + + PN+ ++N+++ A C +G + A
Sbjct: 161 LPTVESCNAYLSSLLDFHR--VDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKA 218
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ +M G+ P+V SY L+ G C K ++ A L M G P+ +++ +L++
Sbjct: 219 VEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHG 278
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C++ KL EA + MKV P+ V YNT++ G+ + G + A KV E+M NG +
Sbjct: 279 FCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKAD 338
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++Y L+ GLC +G A ++ + + P+ S ALI G C D A + +
Sbjct: 339 ILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYK 398
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
++++G P+E T+ M+ E+ E VL ++ + D+ +
Sbjct: 399 SMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTL 447
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A F V PNT +YN ++ + G+ ++A ++ +M GV D+ +Y
Sbjct: 285 LHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNA 344
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++ + +A L++++ + VP+ +Y+ L++ C +K A++L M G
Sbjct: 345 LILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSG 404
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+P+ + + F + A VL DM + + + + GLC G ++A
Sbjct: 405 CHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAM 464
Query: 362 KYMQLMISKGFSP 374
K M ++ P
Sbjct: 465 KLCHEMEARRLIP 477
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP+ TY LI Y + + A K + M+ K N ++ L + A
Sbjct: 300 VTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAA 359
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L K K ++PN +Y+ ++ C + A+ L+ M G P+ +++++L
Sbjct: 360 F-LVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSA 418
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ A ++L DM + D+ + + + LC+ K A KL M+ + P+
Sbjct: 419 FVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLIPE 478
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L G+ N +Y ++ C G +S A + M GV+ D +
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M G CRK + A + ++M +G D ++YT L+N LCR +L+EA ++L M+ KG
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D V Y ++ G+C+ G+ +A V M PN+V+Y L GLC QG A
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M SKG + ++LI G C G +++A + ++ +AG P T+ I+ +
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C +E+++ +L E++ IK
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIK 562
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 38/350 (10%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I ++ L + A+K M + P ++ LL + A
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDE-GQVSDAVR 341
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + HGV+ + + +M FC GD++ A F++M +RG+ D +Y L+ GLC
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY---------------- 291
R ++ A +L++M +KG D ++YT L++ C+ K+ EA+
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 292 -------------------KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+LL M KG +I YN+++ G C+ G A + + DM
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +Y T++G LC D A +Q M+ KG P + L+ GFC G+V
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ +LE +L+ P+ T+ ++ Q C + M+ E+ ++ E+
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV 631
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 127/248 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A + + G+ + +Y +++ +C G ++ A+ + NKM ++ V P+V +Y
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L GLC++ V A +LL +M +KG + +Y +L+N LC+ L +A + + M G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ Y T++ C+ A +L++M G P +V+Y L+ G C G + K
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M+ K P+ + ++L+K +C + + + +L P+E+T+ +++
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 422 CAGEEMEK 429
C M++
Sbjct: 646 CKARNMKE 653
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + + V PN +Y + C GD+ A L ++M +G+ ++ +Y L+
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + +A+ + DM G PD +YTT++ +LC+ K+L A+ LL M KG P
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
IV YN ++ GFC GR ++LE M PN +Y +L+ C + +
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M+S+ P+ + + LIKG C + EA E+++ G
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 156/371 (42%), Gaps = 2/371 (0%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D A+ FD ++ TY LI L RA + +L ++ + V
Sbjct: 368 KGDLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+T LI Y + A M++ P + + L + A +L
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC-AANELLHE 485
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ N +YN ++ C G++ A M E G+ PDV +Y ++ LC+ +
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++RA LL++ML+KG P ++Y L+N C ++ +LL M K +P+ YN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ +C E ++ + M S +PN +Y L+ G C A + MI KG
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
F S +ALI+ K EA + E++ K D + + + +E
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTL 725
Query: 432 EVLNEIVKVEI 442
+ +E+V+V +
Sbjct: 726 ALCDELVEVTL 736
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 184/403 (45%), Gaps = 42/403 (10%)
Query: 47 QQESSISNSKSPIG---SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILI 102
Q E I+++ +G SP V +++ + S+ +LA F +A RQ FR++ ++ LI
Sbjct: 109 QPEPRIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLI 168
Query: 103 LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
LG+ K F L+ ++ ++ ++ F +++ YA + A++TF M F K
Sbjct: 169 EALGKIKQFRLVWSLVEAMRCRGL-LSKDTFRLIVRRYARARKVKEAVETFEKMSSFGLK 227
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAY 221
N ++++L + ++ A +FK ++G +P+ K+Y ++M + D+ +
Sbjct: 228 ADLSDYNWLIDVLSKSKQ-VKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLK 286
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+++ +M + G+ PDV +Y L+ C+ + + A+ + +M G +P Y L+N L
Sbjct: 287 SVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGL 346
Query: 282 -----------------------------------CRKKKLREAYKLLCRMKVKGCNPDI 306
CR K + A+K++ M+ G P+
Sbjct: 347 GSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNA 406
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
Y+ ++ + + +A V + M GC P L +Y +VG C D+A K +
Sbjct: 407 RTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQ 466
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M KG P + +LI G C +++EAC +E+L G P
Sbjct: 467 MKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRP 509
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
R + L ++ G+L + ++ +++R + + A F KM G+ D+ Y
Sbjct: 177 FRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNW 235
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ L + QV +A + ++M G FVPD +YT L+ +K L + M
Sbjct: 236 LIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDA 295
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+V Y T++ FC+ G+ +A KV +M +NGC+P+ Y L+ GL + D A
Sbjct: 296 GIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEA 355
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
KY +L + GF +A++ +C K A +++E+ K G P+ T+ +I+
Sbjct: 356 LKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQY 415
Query: 421 ICAGEEMEKLGEVLNEI 437
+ +++E+ V +
Sbjct: 416 LIKSQKIEEAYNVFQRM 432
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 5/286 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A IF R F TY +L+ G K ++ + + + P + Y
Sbjct: 249 AHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAG--IKPDVVAYGT 306
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI + +S D A+K FR M C P P ++ L + L A F+ +
Sbjct: 307 LISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEER-LDEALKYFELSKAS 365
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G + N ++ A+C + A+ + ++M + G+ P+ +Y I++Q L + ++ A
Sbjct: 366 GFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEA 425
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++ + M +G P +YT ++ C +++ A K+ +MK KG P + +++++ G
Sbjct: 426 YNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLING 485
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C E R +AC ++M G P + L L + G +A+
Sbjct: 486 LCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQ 531
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 5/280 (1%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ E+L N A F+ A + G +S++ ++ A + ++L M
Sbjct: 130 VAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRC 189
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
RG++ +++R++++ R +V AV+ E M + G D Y L++ L + K++++
Sbjct: 190 RGLLSK-DTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKK 248
Query: 290 AYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A+ + MK G PD+ Y ++ G+ E + V ++M G P++V+Y TL+
Sbjct: 249 AHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLI 308
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
C G D A K + M + G P V LI G + ++DEA EL KA
Sbjct: 309 SSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYF-ELSKASGF 367
Query: 409 PHE-DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
P E T +V C + + ++++E+ K I + R
Sbjct: 368 PMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNAR 407
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 2/319 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + P T + T + ++ E + + + R M+E C+P N I+ + +
Sbjct: 140 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR-MVENGCQPDVVTYNSIVNGICRSGD 198
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A DL + + V + +Y+ ++ + C +G I A +LF +M +G+ V +Y
Sbjct: 199 T-SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 257
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++GLC+ + N LL+DM+++ VP+ +++ LL+ ++ KL+EA +L M +
Sbjct: 258 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +P+I+ YNT++ G+C + R +A +L+ M N C P++V++ +L+ G C D
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + + +G + L++GFC GK+ A + +E++ G P T+ +++
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+C ++EK E+ ++ K
Sbjct: 438 LCDNGKLEKALEIFEDLQK 456
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY ++ S AL R M E N K + I++ L + A
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC-RDGCIDAAIS 239
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK G+ + +YN ++R C G + L M R ++P+V ++ +L+
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +L ++M+ +G P+ ++Y TL++ C + +L EA +L M C+PDIV
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ +++ G+C R D KV ++ G + N V+Y LV G C G +A++ Q M
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C+ GK+++A + E+L K+ + I+ +C G ++
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 479
Query: 428 E 428
E
Sbjct: 480 E 480
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + K G P+T ++N +++ G +S A L ++M E G PDV +Y ++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+CR + A+DLL M + D +Y+T+++SLCR + A L M+ KG
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS------------------------------ 334
+V YN++V G C+ G+ D +L+DM S
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311
Query: 335 -----NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
G PN+++Y TL+ G C Q A + LM+ SP +LIKG+C V
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+VD+ V + K G + T+ ++V C +++ E+ E+V
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY L+ Y N A M+ C P +++ + +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR-VDDG 377
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ K G++ N +Y+I+++ FC +G I +A LF +M GV+PDV +Y IL+ G
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+++ ED+ + YTT++ +C+ K+ +A+ L C + KG P+
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 497
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y ++ G C++G +A +L M +G PN +Y TL+ G + K ++
Sbjct: 498 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 557
Query: 366 LMISKGFSPHFS 377
M S GFS S
Sbjct: 558 EMKSCGFSADAS 569
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+ M+ +PLP +R + + + D K +G+ N +
Sbjct: 60 DDAIALFQEMIR--SRPLPSLVDFSRFFSAIARTKQF-NLVLDFCKQLELNGIAHNIYTL 116
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC AY++ K+ + G PD ++ L++GL + +V+ AV L++ M+
Sbjct: 117 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD ++Y +++N +CR A LL +M+ + D+ Y+T++ CR+G
Sbjct: 177 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + ++M + G ++V+Y +LV GLC G ++ ++ M+S+ P+ + L+
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
F GK+ EA + +E++ G +P+ T+ ++ C + + +L+ +V+
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 351
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 159/333 (47%), Gaps = 5/333 (1%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
+ S TY L+ L +A ++ D L+ + P++ T+ L+ ++ +
Sbjct: 249 IKSSVVTYNSLVRGLCKAGKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 306
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + ++ M+ P N +++ N L A ++ ++ P+ ++ ++
Sbjct: 307 ANELYKEMITRGISPNIITYNTLMDGYCMQ-NRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ +C + +F + +RG++ + +Y IL+QG C+ ++ A +L ++M++ G +
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++Y LL+ LC KL +A ++ ++ + IV Y T++ G C+ G+ DA +
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+P G PN+++Y ++ GLC +G A ++ M G +P+ + LI+
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
G + + ++EE+ G + + M++ +
Sbjct: 546 DGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 140/297 (47%), Gaps = 3/297 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + S+ TY L++ ++ + + M+ P N +L++ V
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE-GK 303
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A +L+K G+ PN +YN +M +C +S A + + M PD+ ++
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++G C +V+ + + ++ +G V + ++Y+ L+ C+ K++ A +L M G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD++ Y ++ G C G+ A ++ ED+ + +V Y T++ G+C G + A
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ KG P+ +I G C G + EA +L ++ + G AP++ T+ ++
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
RK V A +L ++M+ +G P+T++Y++L++ C++ +L EA ++L M KG + DI
Sbjct: 711 RKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG-DSDIR 769
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSN 335
+ ++ G R+ R + E++P +
Sbjct: 770 Y---LLAGLMRKKRKGSETEGWENLPDD 794
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 305 DIVHYNTVVLGFCREGR---AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D VHY R GR + A ++ ++M G PN ++Y +L+ G C + D A
Sbjct: 695 DAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEAN 754
Query: 362 KYMQLMISKGFS 373
+ + LM++KG S
Sbjct: 755 QMLDLMVTKGDS 766
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M +RG+ P+ +Y L+ G C++++++ A +L+ M+ KG + Y
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG--DSDIRY-- 770
Query: 277 LLNSLCRKKK 286
LL L RKK+
Sbjct: 771 LLAGLMRKKR 780
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 137/256 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F + K G+ P SYN +M + G + + L + M GV PDV +Y +
Sbjct: 158 IRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSV 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL ++S ++ +L ++ML KG VP+++++TTL++ C+ ++ A ++ +M +
Sbjct: 218 LINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQX 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD + YNT+ G C++G A ++++M G P+ +Y TL+ G C +G D A
Sbjct: 278 LXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAF 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + MI + ALI G C G+ +A +L E+L G P T+ MI+ +
Sbjct: 338 EHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEF 397
Query: 422 CAGEEMEKLGEVLNEI 437
C ++ K + L E+
Sbjct: 398 CKKGDVWKGXKXLKEM 413
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 1/305 (0%)
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPL 164
L + +YF L+ + YP + F L+ + + A F ++ ++ +P
Sbjct: 117 LMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPX 176
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
N ++ + L F L + GV P+ +Y++++ + LF
Sbjct: 177 VXSYNTLMNGYI-RLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELF 235
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
++M +G++P+ ++ L+ G C+ +V+ A+++ + ML++ PD ++Y TL LC+K
Sbjct: 236 DEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKK 295
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L +A+ L+ M +KG PD Y T++ G C+EG A + + M + V+Y
Sbjct: 296 GDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAY 355
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC +G A+K ++ M+S G P +I FC G V + L+E+ +
Sbjct: 356 TALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQR 415
Query: 405 AGEAP 409
G P
Sbjct: 416 NGHVP 420
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 105/199 (52%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G++PN+ ++ ++ C NG + +A ++ +M + + PD +Y L GL
Sbjct: 233 ELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGL 292
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+K +N+A L+++M KG PD +YTTL++ C++ L A++ RM + D
Sbjct: 293 CKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDD 352
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ G C+EGR+ DA K+L +M S G P+ +Y ++ C +G K ++
Sbjct: 353 VAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKE 412
Query: 367 MISKGFSPHFSVSHALIKG 385
M G P + L+ G
Sbjct: 413 MQRNGHVPXVVTYNVLMNG 431
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI + + D + F ML P +++ + + A
Sbjct: 208 VQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGR-VDLA 266
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+++K + P+ +YN + C GD++ A+ L ++M +G+ PD +Y L+ G
Sbjct: 267 MEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDG 326
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ ++ A + + M+ + D ++YT L++ LC++ + +A K+L M G PD
Sbjct: 327 CCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPD 386
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
Y ++ FC++G K L++M NG +P +V+Y L+ G
Sbjct: 387 XGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMNG 431
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 144/258 (55%), Gaps = 2/258 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF L + G P+ +++ +++A C G++S A F + E PD + I
Sbjct: 121 MERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNI 178
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ +Q++ A ++E+M +G VPD ++Y +L++ LC+ ++ EA +LL M +
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YNT++ G+C+ G A +++E M +G P++V++ +L+ G C + D A
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + LM +P+ + LI G C+ G+ +EAC +L E+ G P T+ ++
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIF 358
Query: 422 CAGEEMEKLGEVLNEIVK 439
C ++E+ ++ N +V+
Sbjct: 359 CRNFQIEQAFQIQNLMVE 376
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 172/350 (49%), Gaps = 12/350 (3%)
Query: 93 HSNSTYLILILKLGRAK-----YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
H+N T L+ L +A+ Y D++L +H + LI + ++ +
Sbjct: 67 HNNFTCNCLLRTLVKARRHHQAYQIFRDELL----GQHCDTNHITYNTLIGGFCKAGDME 122
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA + M E P + I++ L N R A F+ + + P++ +NI+
Sbjct: 123 RAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSR-AMQYFRESVE--CAPDSVLFNIL 179
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C +S A + +M ERG++PDV +Y L+ GLC+ ++ A LLE M+ +
Sbjct: 180 VHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV 239
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ ++Y TL+ C+ A++L+ RM G +PD+V +N+++ GFC++ + AC+
Sbjct: 240 RPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACE 299
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
VL M C PNLV+Y L+ GLCD G + A + + M +G P ++LI FC
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++++A + +++ G P ++ + + E ++ +L+ +
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNM 409
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 157/314 (50%), Gaps = 5/314 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY-LRPAFDLFK 190
LF L+ ++N A + M E P N +++ L ++Y + A L +
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLC--KSYRMEEARQLLE 232
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ K V PN +YN ++ +C G +A+ L +M + G PDV ++ L+ G C+KS
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292
Query: 251 QVNRAVDLLEDMLNKGF-VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++++A ++L ++ KG P+ ++Y L++ LC + EA +LL M +G PDI+ Y
Sbjct: 293 KIDKACEVLH-LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITY 351
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N+++ FCR + A ++ M G +P+ +SY TL L FD A + M
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFD 411
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G P+ ++L++G C ++DEA +L + + G P T+ ++V +C ++
Sbjct: 412 AGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471
Query: 430 LGEVLNEIVKVEIK 443
EVL +V I+
Sbjct: 472 AKEVLVMMVSEGIQ 485
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 96/178 (53%), Gaps = 5/178 (2%)
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGFCREGRAIDA 325
+ + + LL +L + ++ +AY++ R ++ G C+ + + YNT++ GFC+ G A
Sbjct: 66 IHNNFTCNCLLRTLVKARRHHQAYQIF-RDELLGQHCDTNHITYNTLIGGFCKAGDMERA 124
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++L +M G P++V++ ++V LC+ G A +Y + + +P + + L+ G
Sbjct: 125 FQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHG 182
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C ++ EA ++EE+ + G P T+ ++ +C ME+ ++L +VK +++
Sbjct: 183 LCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVR 240
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + + + D+A + M + C P N ++ L A +L
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD-AGRANEACELLSEM 339
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY------------- 239
G+LP+ +YN ++ FC N I A+ + N M ERGV+PD SY
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399
Query: 240 ----------------------RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
LM+GLC +++ A LL M G P +Y L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
+ LC+ ++ +A ++L M +G P + T+V REG+
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L G+ N +Y ++ C G +S A + M GV+ D +
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M G CRK + A + ++M +G D ++YT L+N LCR +L+EA ++L M+ KG
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D V Y ++ G+C+ G+ +A V M PN+V+Y L GLC QG A
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M SKG + ++LI G C G +++A + ++ +AG P T+ I+ +
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C +E+++ +L E++ IK
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIK 562
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 38/350 (10%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I ++ L + A+K M + P ++ LL + A
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDE-GQVSDAVR 341
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + HGV+ + + +M FC GD++ A F++M +RG+ D +Y L+ GLC
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY---------------- 291
R ++ A +L++M +KG D ++YT L++ C+ K+ EA+
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 292 -------------------KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+LL M KG +I YN+++ G C+ G A + + DM
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +Y T++G LC D A +Q M+ KG P + L+ GFC G+V
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ +LE +L+ P+ T+ ++ Q C + M+ E+ ++ E+
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV 631
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 127/248 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A + + G+ + +Y +++ +C G ++ A+ + NKM ++ V P+V +Y
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L GLC++ V A +LL +M +KG + +Y +L+N LC+ L +A + + M G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ Y T++ C+ A +L++M G P +V+Y L+ G C G + K
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M+ K P+ + ++L+K +C + + + +L P+E+T+ +++
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 422 CAGEEMEK 429
C M++
Sbjct: 646 CKARNMKE 653
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + + V PN +Y + C GD+ A L ++M +G+ ++ +Y L+
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + +A+ + DM G PD +YTT++ +LC+ K+L A+ LL M KG P
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
IV YN ++ GFC GR ++LE M PN +Y +L+ C + +
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M+S+ P+ + + LIKG C + EA E+++ G
Sbjct: 624 KGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 156/371 (42%), Gaps = 2/371 (0%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D A+ FD ++ TY LI L RA + +L ++ + V
Sbjct: 368 KGDLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+T LI Y + A M++ P + + L + A +L
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC-AANELLHE 485
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ N +YN ++ C G++ A M E G+ PDV +Y ++ LC+ +
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++RA LL++ML+KG P ++Y L+N C ++ +LL M K +P+ YN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ +C E ++ + M S +PN +Y L+ G C A + MI KG
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
F S +ALI+ K EA + E++ K D + + + +E
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTL 725
Query: 432 EVLNEIVKVEI 442
+ +E+V+V +
Sbjct: 726 ALCDELVEVTL 736
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 5/336 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF---KSAHKHGVLPNTKSYNIMMRAFC 212
M E C P N +L+ L N + A +L G P+ SY ++ F
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +RG++PDV +Y ++ LC+ +++A+++L M+ G +PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C + +EA L +M+ G PD+V Y+ ++ C+ GR ++A K+ + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P + +Y TL+ G +G + LM+ G P V LI + GKV
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
D+A V ++ + G P+ T+ ++ +C +E
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 151/293 (51%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ ++ A K F SM + KP +L+ T + L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT-KGALVEM 355
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ ++I++ A+ G + A +F+KM ++G+ P+ +Y ++
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V A+ E M+++G P + Y +L++ LC K A +L+ M +G +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ E M G PN+++Y TL+ G C G D A K +
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P+ LI G+C + ++++A + +E+ +G +P T+ +I+
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 149/314 (47%), Gaps = 7/314 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T +I + + D+A T+ ML+ P N I+ L + + A ++ +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA-MDKAMEVLNTM 257
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K+GV+P+ +YN ++ +C +G A KM GV PDV +Y +LM LC+ +
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + + M +G P+ +Y TLL K L E + LL M G +PD ++ +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + ++G+ A V M G PN V+Y ++G LC G + A Y + MI +G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE---EMEK 429
SP V ++LI G C K + A ++ E+L G + + I+ C E EK
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 430 LGEVLNEIVKVEIK 443
L E++ V++ +K
Sbjct: 498 LFELM---VRIGVK 508
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 158/321 (49%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY +I ++ D+A++ +M++ P N IL + + A
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV P+ +Y+++M C NG A +F+ M +RG+ P++ +Y L+QG
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD ++ L+ + ++ K+ +A + +M+ +G NP+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y V+ C+ GR DA E M G P + Y +L+ GLC ++ A++ +
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + E +++ G P+ T+ ++ C
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+M++ ++L+ +V V +K +T
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNT 546
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 130/262 (49%), Gaps = 4/262 (1%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ A V P+ +Y I++ C G + + + + ++G D ++ L++G
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 246 LCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM---KVKG 301
LC + + A+D+ L M G +P+ SY LL LC + + +EA +LL M + G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y TV+ GF +EG + A +M G LP++V+Y +++ LC D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M+ G P ++++ G+C+ G+ EA G L+++ G P T+ +++ +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C + ++ + + K +K
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLK 333
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 133/263 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + G+ PN +Y ++ C +G + A F +M + G+ P Y L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ RA +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ YNT++ G+C G+ +A K+L M S G PN V+Y TL+ G C + A
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M S G SP + +++G + A + + ++G T+ +I+ +C
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 425 EEMEKLGEVLNEIVKVEIKGDTR 447
+ + ++ + +++K + R
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEAR 652
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 3/339 (0%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y+ IL AK + +L+ K + P+ TY +I I +S + A+ F
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M++ P N ++ L T + R A +L G+ NT +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWER-AEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ + LF M GV P+V +Y L+ G C +++ A+ LL M++ G P+T++Y+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL+N C+ ++ +A L M+ G +PDI+ YN ++ G + R A ++ + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G L +Y ++ GLC + D A + Q + + +I VG+ DEA
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ G P+ T+ ++ I +E+L ++
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 4/268 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYR 240
L F + K G + ++ +++ C + S A + +M E G +P+V SY
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
IL++GLC +++ A++LL M + G PD +SYTT++N ++ +AY M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD+V YN+++ C+ A +VL M NG +P+ ++Y +++ G C G
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A +++ M S G P L+ C G+ EA + + + K G P T+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ + ++ +L+ +V+ I D
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPD 370
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 218 SIAYTLFNKMFERG---VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + +N+M G V PD+ +Y IL+ CR +++ L +++ KGF D +++
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125
Query: 275 TTLLNSLCRKKKLREAYKL-LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T LL LC K+ +A + L RM GC P++ YN ++ G C E R+ +A ++L M
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 334 SN---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G P++VSY T++ G +G D A M+ +G P +++I C
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLG 431
+D+A VL ++K G P T+ I+ C +G+ E +G
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 23/330 (6%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
N Y LI L + +++++ + + F +I + + + K F
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M+ KP N ++ + A L G+ PNT +Y+ ++ +C
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLA-GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A LF +M GV PD+ +Y I++QGL + + A +L + G + +
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 274 YTTLLNSLCRKKKLREAYKL---LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
Y +L+ LC+ K +A ++ LC M +K + +N ++ + GR +A +
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLK---LEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
SNG +PN +YR + + QG+ + + M G + G N
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD--------SGMLNF- 726
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ ELL+ GE T++ ++ +
Sbjct: 727 -------IVRELLQRGEITRAGTYLSMIDE 749
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 3/258 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY LI Y + D A+K M+ KP + ++ + + A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC-KISRMEDA 565
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LFK GV P+ +YNI+++ + A L+ ++ E G ++ +Y I++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + A+ + +++ + ++ ++++L + + EA L G P+
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y + +G + ++ M NGC + +V L +G A Y+
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745
Query: 366 LMISKGFSPHFSVSHALI 383
++ K FS S + I
Sbjct: 746 MIDEKHFSLEASTASLFI 763
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R FRH T+L +I LGRA + IL+ + + LF LI
Sbjct: 135 ALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLI 194
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F+ M E GV
Sbjct: 195 DSYGKAGIVQESVKVFQKMKEL------------------------------------GV 218
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+ + + G +A FN M GVMP +Y I++ G +V A
Sbjct: 219 ERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANR 278
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
E+M + PD ++Y T++N R KK+ EA K MK + P ++ Y T++ G+
Sbjct: 279 FFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYV 338
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH-F 376
GR D ++ E+M S G PN V+Y TL+ GLCD A+ ++ M+ + +P
Sbjct: 339 SVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDN 398
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI C G++D A VL+ +++ + +++ C ++ ++L++
Sbjct: 399 SIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDK 458
Query: 437 IVKVEI 442
+++ EI
Sbjct: 459 LIEKEI 464
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 148/359 (41%), Gaps = 44/359 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + + +K + T +T +IK Y D L+ F M
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM 353
Query: 157 LEFNCKP--------LP---------------KQL---------NRILELLVT---HRNY 181
F KP LP K++ N I L+T
Sbjct: 354 KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQ 413
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP------D 235
L A D+ K+ + + Y +++ FC +G A L +K+ E+ ++ +
Sbjct: 414 LDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLE 473
Query: 236 VES--YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+ES Y ++++ LC Q ++A L ++ KG V D +++ L+ ++ A+++
Sbjct: 474 MESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGAPESAFEI 532
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M + + Y ++ F ++G DA L+ M NG +P+ +R+++ L +
Sbjct: 533 LKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFE 592
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A + M M+ KG + + +++ G V+EA G ++ L+ G P D
Sbjct: 593 DGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPDFD 651
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 141/322 (43%), Gaps = 13/322 (4%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
NS ++ LI +A D+L + P + LI+ + +S + DRA+K
Sbjct: 398 NSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLD 457
Query: 155 SMLEFNCKPLPKQ--------LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++E P+ N I+E L + A LF+ K GV + ++N
Sbjct: 458 KLIEKEIILRPQNSLEMESSGYNLIIEYLC-NSGQTSKAETLFRQLMKKGV-QDPIAFNN 515
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R G A+ + M R V + ++YR+L++ +K + A L+ M+ G
Sbjct: 516 LIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENG 575
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+PD+ + +++ SL +++ A +++ M KG ++ ++ G +A
Sbjct: 576 HIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL 635
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ + +NGC P+ + L+ LC +G A K + + + ++ FS ++
Sbjct: 636 GRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDAL 692
Query: 387 CNVGKVDEACGVLEELLKAGEA 408
GK A +L ++++ G A
Sbjct: 693 LTAGKTLNAYSILCKIMQKGGA 714
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA--FD 187
P F LI+ +++ P+ A + + M + +P++ + L+ + PA
Sbjct: 510 PIAFNNLIRGHSKEGAPESAFEILKIM---GRREVPREADAYRLLIESFLKKGEPADAKT 566
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++G +P++ + +M + +G I A + N M E+GV +++ +++ L
Sbjct: 567 ALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALL 626
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ V A+ ++ ++N G PD + LL+ LC K K A KLL + N
Sbjct: 627 LRGHVEEALGRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFS 683
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
Y V+ G+ ++A +L + G + S + L+ L ++G
Sbjct: 684 SYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEG 731
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 4/210 (1%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+IL + P + LI+ + + P A M+E P ++E L
Sbjct: 531 EILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESL 590
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ A + + + GV N ++ A G + A + + G PD
Sbjct: 591 FED-GRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD 649
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ L+ LC K + A+ LL+ L + + SY +L++L K AY +LC
Sbjct: 650 FDG---LLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILC 706
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
++ KG D ++ EG A
Sbjct: 707 KIMQKGGATDWSSCKDLIRSLNEEGNTKQA 736
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 2/320 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT--HRNYLRPA 185
++ L I Y P +A + F M +P N +L LV + +R +
Sbjct: 122 ISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLS 181
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F K GV NT S+NI++ C A + KM + G PD +Y ++ G
Sbjct: 182 KAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDG 241
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+K ++N A DLL DM NKG P+ ++ L+ CR L+EA ++ M PD
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN ++ GFC++GR +A ++ E+M + P++V+Y TL+ G + G + K ++
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G P+ + ++K F GK+DE + ++ ++G P T+ ++ C
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+M++ +++E+ + +K D
Sbjct: 422 KMDEAFRLMDEMGRKGLKMD 441
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 169/345 (48%), Gaps = 5/345 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+T+ IL++ R + ++ I L S++ V P +TY +I + + A++
Sbjct: 268 TTFNILVVGCCRLGWLKEAANV-IELMSQN-SVVPDAWTYNVMISGFCKQGRIAEAMRLR 325
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M P N ++ H + F L + G+ PN+ +YN+M++ F
Sbjct: 326 EEMENLKLSPDVVTYNTLINGCFEHGSS-EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVK 384
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + KM E G +PD+ +Y L+ C+ +++ A L+++M KG D ++
Sbjct: 385 KGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT 444
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T+L +LCR++KL EA+ LLC + +G D V Y T+++G+ + +A A ++ ++M
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+P++++Y +++ GLC G + A + ++ G P + +I G+C G+V+
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVE 564
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+A ++++ P T ++ +C +EK ++ N +
Sbjct: 565 KAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWI 609
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 5/328 (1%)
Query: 75 PLLAKEIFDYASR---QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
P A +IF+ R QP N T L +++ + L + + +
Sbjct: 140 PHQAAQIFNRMKRLGMQPTLLTCN-TLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTN 198
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
F LI N A++ M ++ C P N IL+ L + L A DL
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCK-KGRLNEARDLLLD 257
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ PN ++NI++ C G + A + M + V+PD +Y +++ G C++ +
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A+ L E+M N PD ++Y TL+N E +KL+ M+ +G P+ V YN
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+V F ++G+ + K + M +GCLP++V+Y TL+ C G D A + M M KG
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ +++ C K+DEA +L
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLL 465
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 146/292 (50%), Gaps = 3/292 (1%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E P + TY LI + + D A + M K LN +L L R
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A DL SA + G + SY ++ + + S A L+++M E+ ++P + +Y
Sbjct: 457 K-LDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITY 515
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ GLC+ + N+A+D L+++L G VPD ++Y T+++ C++ ++ +A++ +M
Sbjct: 516 NSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVE 575
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
K PD+V NT++ G C+EG A K+ S G + VSY T++ LC + F
Sbjct: 576 KNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGE 635
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
A ++ M K P +A++ G + G++ +A + ++ + G++ ++
Sbjct: 636 AFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQ 687
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 10/344 (2%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
F LI+++ E + P+ TY ++K + + D KT R M E C P
Sbjct: 357 FKLIEEM------EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N ++ + AF L + G+ + + N M+RA C + A+ L
Sbjct: 411 NTLISWHCK-VGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR 469
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
RG D SY L+ G + + ++A+ L ++M K +P ++Y +++ LC+ K
Sbjct: 470 RRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+A L + G PD + YNT++ G+C+EG+ A + M P++V+ TL+
Sbjct: 530 QAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLL 589
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC +GM + A K ISKG + +I C + EA +LEE+ +
Sbjct: 590 CGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAG 452
P T+ I+ + M+ E +++I + + K + + +E G
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAE-KGKSENQFLELG 692
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 25/303 (8%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + D R+ + + T ++ L R + D+L + + Y V + LI
Sbjct: 426 AFRLMDEMGRK-GLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y + +AL+ + M E P N ++ L A D + G+
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLC-QMGKTNQAIDKLDELLESGL 543
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P+ +YN ++ +C G + A+ NKM E+ PDV + L+ GLC++ + +A+
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L ++KG D +SY T++ SLC++K+ EA+ LL M+ K PD YN ++ G
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLT 663
Query: 318 REGRAIDACKVLEDMPSNGC-----------------------LPNLVSYRTLVGGLCDQ 354
GR DA + + + G PN ++Y + LC Q
Sbjct: 664 DAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQ 723
Query: 355 GMF 357
G +
Sbjct: 724 GRY 726
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 182/408 (44%), Gaps = 27/408 (6%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL--ILKLGRAKY---- 110
+PI P RV L+ + DP LA + F ++ + F+HS +Y I+ IL R Y
Sbjct: 107 APIWVP-RV--LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 163
Query: 111 ------FSLID-DILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
S D D+ L S P +F L + + + + A++ F M F
Sbjct: 164 VLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFD----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
P + N +L HR D FK G P +YNIM+ C GD+
Sbjct: 224 FPKTRSCNGLL-----HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A LF +M RG++PD +Y ++ G + +++ V E+M + PD ++Y L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N C+ KL + MK G P++V Y+T+V FC+EG A K DM G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+PN +Y +L+ C G A + M+ G + ALI G C+ ++ EA
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ ++ AG P+ ++ ++ + M++ E+LNE+ IK D
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY +I + + D + F M + C+P N ++ L
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-LPIG 351
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ ++ +G+ PN SY+ ++ AFC G + A + M G++P+ +Y L+
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++ A L +ML G + ++YT L++ LC ++++EA +L +M G P+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ GF + A ++L ++ G P+L+ Y T + GLC + AK M
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G + + L+ + G E +L+E+ + T+ +++ +C +
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 426 EMEKLGEVLNEI 437
+ K + N I
Sbjct: 592 LVSKAVDYFNRI 603
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 135/286 (47%), Gaps = 4/286 (1%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K + V P+L +Y LI + ++ DRAL+ + KP + L +
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A + + G+ N+ Y +M A+ +G+ + L ++M E + V ++
Sbjct: 522 K-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+L+ GLC+ V++AVD + N G + +T +++ LC+ ++ A L +M
Sbjct: 581 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG PD Y +++ G ++G ++A + + M G +L++Y +LV GL
Sbjct: 641 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
A+ +++ MI +G P + +++K +G +DEA + L+K
Sbjct: 701 KARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 36/266 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +LF GV+PN SYN ++ F ++ A L N++ RG+ PD+ Y
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ GLC ++ A ++ +M G ++L YTTL+++ + E LL MK
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVA 360
+V + ++ G C+ A + ++ G N + ++ GLC + A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV---------------------- 398
+ M+ KG P + +L+ G G V EA +
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 399 -------------LEELLKAGEAPHE 411
LEE++ G P E
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDE 718
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%), Gaps = 4/298 (1%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D A+ +F ML P N++L + +++ L G+ PN +
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHH-STLLSLSHQMDSFGIPPNIYT 98
Query: 204 YNIMMRAFCF--NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+I++ +FC G I A LF+KM G PDV +Y L+ GLC+ + A+ LL
Sbjct: 99 LHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 158
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M+ K P+ +Y T+++SLC+ +++ EA+ L M KG +PDI YN+++ C
Sbjct: 159 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 218
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS-PHFSVSH 380
+L +M + +P++VS+ T+V LC +G A + MI +G P+ +
Sbjct: 219 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI G+C + ++D+A + E+ + P T+ ++ +C E ++ + +E+V
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 336
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 146/314 (46%), Gaps = 2/314 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P +FTY I+A NL + M++ P N +++ L
Sbjct: 199 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 258
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ K + G +PN SYN ++ +C I A LF +M + ++PD +Y L+ G
Sbjct: 259 DVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 318
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ A+ L +M+ +P+ ++Y LL+ LC+ + L EA LL ++ +PD
Sbjct: 319 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 378
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I N + G CR G A + ++ S G P++ +Y ++ GLC +G+ D A K +
Sbjct: 379 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 438
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G + + + + + +GF + A +L+E++ G + T + V +
Sbjct: 439 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 498
Query: 426 EMEKLGEVLNEIVK 439
+ L ++L + K
Sbjct: 499 LDQSLKQILRDFCK 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 172/377 (45%), Gaps = 43/377 (11%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP----DRALKTFRSM 156
L+ + + K+ S + + ++ + + + + P+++T I I + +L AL F M
Sbjct: 67 LLTSIAKMKHHSTL--LSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKM 124
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ +P ++ L N A L S + PN +YN ++ + C +
Sbjct: 125 IGEGFRPDVVTYGTLINGLCKVGN-TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 183
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ A+ LF++M +G+ PD+ +Y L+ LC + LL +M++ +PD +S+ T
Sbjct: 184 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 243
Query: 277 LLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCR----------------- 318
++++LC++ K+ EA+ ++ +M + GC P+++ YNT++ G+C+
Sbjct: 244 VVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 303
Query: 319 -------------EG-----RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G R DA + +M + +PNLV+YR L+ LC A
Sbjct: 304 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 363
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ + P V++ I G C G+++ A + L G P T+ +++
Sbjct: 364 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 423
Query: 421 ICAGEEMEKLGEVLNEI 437
+C +++ ++ E+
Sbjct: 424 LCRRGLLDEASKLFREM 440
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + ++P+T +Y+ ++ C + A LF++M +P++ +YRIL+
Sbjct: 293 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 352
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ + A+ LL+ + PD ++ +CR +L A L + KG P
Sbjct: 353 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 412
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ Y+ ++ G CR G +A K+ +M NGC N Y T+ G A + +
Sbjct: 413 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 472
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Q M+++GFS S +K + G +L + K +E+ VM++ +I
Sbjct: 473 QEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYEN--VMVLQEI 527
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I A + FN+M P + L+ + + + + L M + G P+ +
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 277 LLNSLCR--KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+NS C + K+ EA L +M +G PD+V Y T++ G C+ G A ++L M
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
C PN+ +Y T++ LC A M++KG SP ++LI CN+ +
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+L E++ + P ++ +V +C ++ + +V++++++
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 266
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ ++ A+ ML P T+ + LL S+ + K L +M G P+I
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99
Query: 310 NTVVLGFCR--EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ ++ FC G+ +A + + M G P++V+Y TL+ GLC G A + + M
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ K P+ + +I C +V EA + E++ G +P T+ ++ +C E
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ + +LNE+V +I D
Sbjct: 220 KHVATLLNEMVDSKIMPDV 238
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 1/353 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY I I R SL +L + Y + L+ Y S A+
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E KP ++ L H N A L + G P+ +Y ++ C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A L NKM + +V + ++ LC+ V AVDL +M KG P+ +
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L+N LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ E+M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P+ ++Y L+ G C D AK+ + M+SK P+ + LI GFC +V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ + E+ + G + T+ I+ + + V ++V + D
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 8/319 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY ++ + D AL M K N I++ L +R ++ A D
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR-HVEVAVD 279
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ PN +YN ++ C G S A L + M E+ + P+V ++ L+
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L E+M+ + PDT++Y L+N C +L EA ++ M K C P+I
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R D ++ +M G + N V+Y T++ G G D A+ + M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEE 426
+S L+ G C+ GK+D A + + L K+ + + ++ +C AG
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG-- 517
Query: 427 MEKLGEVLNEIVKVEIKGD 445
K+GE + + IK D
Sbjct: 518 --KVGEAWDLFCSLSIKPD 534
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + N++L V N L + G+ + +Y
Sbjct: 65 DDAVDLFGDMVK--SRPFPSIVEFNKLLSA-VAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I + FC +S+A + KM + G PD+ + L+ G C +++ AV L++ M+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ PDT ++TTL++ L K EA L+ +M +GC PD+V Y TVV G C+ G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M + N+V + T++ LC +VA M +KG P+ ++LI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN G+ +A +L +L+ P+ T+ ++ ++ + ++ E+++ I
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 445 DT 446
DT
Sbjct: 362 DT 363
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++ L+TY I + + AL M++ +P L+ +L H + A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC-HSKRISDA 172
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G P+T ++ ++ + S A L ++M +RG PD+ +Y ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ ++ A++LL M + + + T+++SLC+ + + A L M+ KG P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN+++ C GR DA ++L +M PN+V++ L+ +G A+K +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI + P + LI GFC ++DEA + + ++ P+ T+ ++ C +
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+E E+ E+ + + G+T
Sbjct: 413 RVEDGVELFREMSQRGLVGNT 433
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 10/301 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI + + A K M++ + P N ++ H N L A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH-NRLDEA 382
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+FK LPN ++YN ++ FC + LF +M +RG++ + +Y ++QG
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + A + + M++ D ++Y+ LL+ LC KL A + ++ +
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YNT++ G C+ G+ +A + + P++V+Y T++ GLC + + A +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACG--VLEELLKAGEAPHEDTWVMIVPQICA 423
M G P+ + LI+ N+ D A +++E+ +G T ++ +
Sbjct: 560 KMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Query: 424 G 424
G
Sbjct: 618 G 618
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 38/274 (13%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY LI + N D A + F+ M+ +C P + N ++ + +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR-VEDG 417
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +Y +++ F GD A +F +M V D+ +Y IL+ G
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 246 LCRKSQVNRAV-------------------DLLEDMLNKGFV-------------PDTLS 273
LC +++ A+ ++E M G V PD ++
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y T+++ LC K+ L+EA L +MK G P+ YNT++ R+ + +++++M
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
S+G + + S +LV + G D K ++ ++
Sbjct: 598 SSGFVGD-ASTISLVTNMLHDGRLD--KSFLNML 628
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 228 FERGVMPDVESYR-ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ER YR IL L +V+ AVDL DM+ P + + LL+++ + K
Sbjct: 39 WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L +M+ G + D+ Y+ + FCR + A VL M G P++V+ +
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C A + M+ G+ P LI G K EA +++++++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
P T+ +V +C +++ +LN++ IK + I
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 128/241 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF LF+ + P+ ++NI++ A C G++ A + M + GVMP+V +Y
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSS 318
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C +QVN+A +L + G P+ SY T++N C+ K + EA L M+ KG
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V YN+++ G C+ GR A +++++M NG N+ +Y L+ LC D A
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ + +G P + LI G C VG++ A V ++LL G + + T+ ++V +
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498
Query: 422 C 422
C
Sbjct: 499 C 499
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 156/317 (49%), Gaps = 3/317 (0%)
Query: 128 VTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + T+ IY + + A FR M+ N P N +++ L N L+ A
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN-LKGA 297
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ K GV+PN +Y+ +M +C ++ A + N + + G P+ SY ++ G
Sbjct: 298 KNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMING 357
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V+ A+ L DM KG PD ++Y +L++ LC+ ++ A++L+ M G +
Sbjct: 358 FCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPAN 417
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ C+ A +++ + G P++ ++ L+ GLC G A+ Q
Sbjct: 418 IFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQ 477
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++SKG+S + + ++ G C G DEA +L ++ G P T+ ++ + +
Sbjct: 478 DLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKD 537
Query: 426 EMEKLGEVLNEIVKVEI 442
E EK ++L E++ ++
Sbjct: 538 ENEKAEKLLREMIARDV 554
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 159/314 (50%), Gaps = 8/314 (2%)
Query: 132 LFTYLI-KIYAE-----SNLP-DRALKTFRSMLEFNCKPLPKQLNRILELLV-THRNYLR 183
LF +LI ++Y++ SN+ D + +F +L + N+IL LV ++ N+
Sbjct: 26 LFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYP 85
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L + HG+ P+ ++NI++ +C +++ A+++ K+ + G PD ++ L+
Sbjct: 86 TAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLI 145
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC +V A+ + +L GF D SY TL+N LC+ + R A ++L ++ K
Sbjct: 146 KGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVK 205
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
++V YNT++ C+ IDA ++ M + P++V++ L+ G C G + A
Sbjct: 206 INVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGL 265
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ K +P + + L+ C G + A +L ++K G P+ T+ ++ C
Sbjct: 266 FREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCL 325
Query: 424 GEEMEKLGEVLNEI 437
++ K VLN I
Sbjct: 326 VNQVNKAKHVLNTI 339
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 3/323 (0%)
Query: 117 ILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
I ++ + E + +TP +FT+ LI Y + A +L+ +P N +++
Sbjct: 88 ISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKG 147
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L + ++ A G + SY ++ C G+ A + K+ + V
Sbjct: 148 LCLNGK-VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V Y ++ LC+ V A +L M+ K PD ++++ L+ C +L EA+ L
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +K NPD +N +V C+EG A +L M G +PN+V+Y +L+ G C
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ AK + + G +P+ +I GFC + VDEA + ++ G AP + T+
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ +C + E+++E+
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEM 409
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A + + V N YN ++ + C + + AY L+++M + + PDV ++ L
Sbjct: 190 RTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSAL 249
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q+ A L +M+ K PD ++ L+++LC++ L+ A +L M +G
Sbjct: 250 IYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGV 309
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V Y++++ G+C + A VL + G PN SY T++ G C M D A
Sbjct: 310 MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALS 369
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M KG +P ++LI G C G++ A +++E+ G+ + T+ ++ +C
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALC 429
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
+++ ++ +I I+ D
Sbjct: 430 KNHHVDQAIALVKKIKDQGIQPD 452
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 136/270 (50%), Gaps = 1/270 (0%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
N I++ L H+ + A++L+ + P+ +++ ++ FC G + A+ LF +M
Sbjct: 212 NTIIDSLCKHK-LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+ + PD ++ IL+ LC++ + A ++L M+ +G +P+ ++Y++L++ C ++
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN 330
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+A +L + G P+ Y T++ GFC+ +A + DM G P+ V+Y +L+
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC G A + + M G + + LI C VD+A +++++ G
Sbjct: 391 DGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQ 450
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P T+ +++ +C ++ +V +++
Sbjct: 451 PDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 104 KLGRAKY-FSLIDDILITLKSEHYPVTPS-LFTY--LIKIYAESNLPDRALKTFRSMLEF 159
K GR Y + L+D++ H P+ +FTY LI +++ D+A+ + + +
Sbjct: 395 KSGRISYAWELVDEM-------HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQ 447
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+P N IL + L+ A D+F+ G N +YNIM+ C G
Sbjct: 448 GIQPDMYTFN-ILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDE 506
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A L +KM + G++PD +Y L+Q L K + +A LL +M+ + V
Sbjct: 507 AEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R FRH T+L +I LGRA + IL+ + + LF LI
Sbjct: 135 ALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLI 194
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F+ M E GV
Sbjct: 195 DSYGKAGIVQESVKVFQKMKEL------------------------------------GV 218
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+ + + G +A FN M GVMP +Y I++ G +V A
Sbjct: 219 ERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANR 278
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
E+M + PD ++Y T++N R KK+ EA K MK + P ++ Y T++ G+
Sbjct: 279 FFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYV 338
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH-F 376
GR D ++ E+M S G PN V+Y TL+ GLCD A+ ++ M+ + +P
Sbjct: 339 SVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDN 398
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI C G++D A VL+ +++ + +++ C ++ ++L++
Sbjct: 399 SIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDK 458
Query: 437 IVKVEI 442
+++ EI
Sbjct: 459 LIEKEI 464
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 148/359 (41%), Gaps = 44/359 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + + +K + T +T +IK Y D L+ F M
Sbjct: 294 TYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM 353
Query: 157 LEFNCKP--------LP---------------KQL---------NRILELLVT---HRNY 181
F KP LP K++ N I L+T
Sbjct: 354 KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQ 413
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP------D 235
L A D+ K+ + + Y +++ FC +G A L +K+ E+ ++ +
Sbjct: 414 LDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLE 473
Query: 236 VES--YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+ES Y ++++ LC Q ++A L ++ KG V D +++ L+ ++ A+++
Sbjct: 474 MESSGYNLIIEYLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGAPESAFEI 532
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M + + Y ++ F ++G DA L+ M NG +P+ +R+++ L +
Sbjct: 533 LKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFE 592
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A + M M+ KG + + +++ G V+EA G ++ L+ G P D
Sbjct: 593 DGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPDFD 651
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 141/322 (43%), Gaps = 13/322 (4%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
NS ++ LI +A D+L + P + LI+ + +S + DRA+K
Sbjct: 398 NSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLD 457
Query: 155 SMLEFNCKPLPKQ--------LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++E P+ N I+E L + A LF+ K GV + ++N
Sbjct: 458 KLIEKEIILRPQNSLEMESSGYNLIIEYLC-NSGQTSKAETLFRQLMKKGV-QDPIAFNN 515
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R G A+ + M R V + ++YR+L++ +K + A L+ M+ G
Sbjct: 516 LIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENG 575
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+PD+ + +++ SL +++ A +++ M KG ++ ++ G +A
Sbjct: 576 HIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL 635
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++ + +NGC P+ + L+ LC +G A K + + + ++ FS ++
Sbjct: 636 GRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDAL 692
Query: 387 CNVGKVDEACGVLEELLKAGEA 408
GK A +L ++++ G A
Sbjct: 693 LTAGKTLNAYSILCKIMQKGGA 714
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA--FD 187
P F LI+ +++ P+ A + + M + +P++ + L+ + PA
Sbjct: 510 PIAFNNLIRGHSKEGAPESAFEILKIM---GRREVPREADAYRLLIESFLKKGEPADAKT 566
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++G +P++ + +M + +G I A + N M E+GV +++ +++ L
Sbjct: 567 ALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALL 626
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ V A+ ++ ++N G PD + LL+ LC K K A KLL + N
Sbjct: 627 LRGHVEEALGRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFS 683
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
Y V+ G+ ++A +L + G + S + L+ L ++G
Sbjct: 684 SYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEG 731
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 79/210 (37%), Gaps = 4/210 (1%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+IL + P + LI+ + + P A M+E P ++E L
Sbjct: 531 EILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESL 590
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ A + + + GV N ++ A G + A + + G PD
Sbjct: 591 FED-GRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD 649
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ L+ LC K + A+ LL+ L + + SY +L++L K AY +LC
Sbjct: 650 FDG---LLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILC 706
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
++ KG D ++ EG A
Sbjct: 707 KIMQKGGATDWSSCKDLIRSLNEEGNTKQA 736
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 2/299 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L S + +T LI + +S ++A+K M C P + +L L +
Sbjct: 175 LTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 234
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A DLF+ G +PN +Y ++ C + A L ++M PD SY
Sbjct: 235 -LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYN 293
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK-V 299
L+ G CR ++ A L ++M K +PD ++YT L+ C +L EA LL MK
Sbjct: 294 ALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 353
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G +PD+V Y+ VV G+ R R ++A + +++M + PN V+Y +L+ GLC G D
Sbjct: 354 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDH 413
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + ++ M++K P +++I C +G +DEA +L + G P T+ ++
Sbjct: 414 AMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 204/438 (46%), Gaps = 23/438 (5%)
Query: 31 FCYSSSSQESPSSPEQQQESSISNSKS---PIGSPCRVQKLIASQSDPLLAKEIFDYASR 87
FC ++ +++ + E+ +E N ++ + C+ + + S++ +L KE+ D S
Sbjct: 17 FCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKAR--LTSKAYEVL-KEMRDGKSV 73
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
P+ TY +I + +IL + + + P + TY ++
Sbjct: 74 APDL----VTYSTVINGFCKQGEMDRACEILREMVTRD-GIAPDVVTYTSVVDGLCRDGK 128
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL-PNTKSY 204
DRA + R M +P + ++ R + A L+K P+ +Y
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARK-VDEALKLYKEILTSSSWKPDVVTY 187
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ FC +G++ A + M R +P+V +Y L+ GLC+ +++A+DL M +
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG VP+ ++YTTL++ LC K+ A L+ M C PD V YN ++ G+CR GR +
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM-ISKGFSPHFSVSHALI 383
A ++ ++M + CLP+ ++Y LV G C+ + A+ ++ M + G P ++
Sbjct: 308 AKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 367
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G+ + EA ++E++ AP+ T+ ++ +C ++ EVL +V
Sbjct: 368 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV----- 422
Query: 444 GDTRIVEAGIGLEDYLIG 461
+ VE +G + +IG
Sbjct: 423 --NKRVEPSVGTFNSVIG 438
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 13/322 (4%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI ++ D A M C P N +L+ + A
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC-RLGRIEEAKQ 310
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM-FERGVMPDVESYRILMQGL 246
LFK LP+ +Y ++R FC + A L M G+ PDV +Y I++ G
Sbjct: 311 LFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 370
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
R + A + +++M+ + P+ ++Y++L++ LC+ ++ A ++L M K P +
Sbjct: 371 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSV 430
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+N+V+ CR G +A K+L M ++G P +V+Y TL+ G G ++A + ++
Sbjct: 431 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 490
Query: 367 M--------ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M + P + S ALI+G C ++D+A V+EEL P E+ + IV
Sbjct: 491 MRKKAKKSSSAANLVPEQAFS-ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 549
Query: 419 PQICAGEEMEKLGEVLNEIVKV 440
+ E+ G+++N I KV
Sbjct: 550 DGLLRAGRTEEAGKLINSISKV 571
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 118/206 (57%), Gaps = 6/206 (2%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYK 292
P V ++ I++ G C+ +Q+ +A+ E M + FV P+ +Y ++N LC+ + +AY+
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 293 LLCRMK-VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCLPNLVSYRTLVGG 350
+L M+ K PD+V Y+TV+ GFC++G AC++L +M + +G P++V+Y ++V G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE-AP 409
LC G D A + ++ M KG P ALI G+CN KVDEA + +E+L + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLN 435
T+ ++ C +EK ++L
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLG 208
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 126/234 (53%), Gaps = 4/234 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P ++ I++ FC + A F KM E V P+ +Y +++ GLC+ ++A ++
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 259 LEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGF 316
L++M + K PD ++Y+T++N C++ ++ A ++L M + G PD+V Y +VV G
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA-KKYMQLMISKGFSPH 375
CR+G+ AC+++ +M G P+ ++ L+ G C+ D A K Y +++ S + P
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
ALI GFC G +++A +L + P+ T+ ++ +C ++++
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 237
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 7/317 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L A ++ + + P + L+ Y + A + F+ M
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+C P ++ F L G+ P+ +Y+I++ +
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A +M R V P+ +Y L+ GLC+ +V+ A+++L++M+NK P ++ +
Sbjct: 376 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNS 435
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM---- 332
++ +LCR + EA+KLL M G P +V Y T++ GF R GR A ++ E M
Sbjct: 436 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKA 495
Query: 333 PSNGCLPNLV---SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ NLV ++ L+ GLC D A ++ + S+ P A++ G
Sbjct: 496 KKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRA 555
Query: 390 GKVDEACGVLEELLKAG 406
G+ +EA ++ + K G
Sbjct: 556 GRTEEAGKLINSISKVG 572
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P +++T +++ C+ +L++A +M+ + P+ YN VV G C+ A +V
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 329 LEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGF 386
L++M P+LV+Y T++ G C QG D A + ++ M+++ G +P +++ G
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
C GK+D AC ++ E+ G P + T+ ++ C ++++ ++ EI+
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P +V + ++ GFC+ + A E M PN +Y +V GLC + A
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 362 KYMQLM-ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL-KAGEAPHEDTWVMIVP 419
+ ++ M K +P +I GFC G++D AC +L E++ + G AP T+ +V
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 420 QICAGEEMEKLGEVLNEI 437
+C +M++ E++ E+
Sbjct: 122 GLCRDGKMDRACEMVREM 139
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 179/363 (49%), Gaps = 9/363 (2%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS---EHYPVTPSLFTYL 136
+ F +A ++ +F+H ++TY+ LI L + L+D++ T++ V P+ ++ +
Sbjct: 109 QFFKWAGKRQHFQHDSTTYMALIRCLEES---GLVDEMWRTIQDMIRSPCSVGPAEWSEI 165
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+KI ++ + ++AL F + C P N ++ L++ H + +L+ G
Sbjct: 166 LKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLI-LMLMHEGHHEKIHELYNEICSEG 224
Query: 197 -VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P+T +Y+ ++ AF A+ LF++M E G+ P + Y ++ + ++V A
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L+E+M KG P +YT L+ L + ++ +AY L M GC PD+V N ++
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSP 374
R GR DA K+ M S C PN+V+Y T++ + + + A + + M + G +P
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
LI GFC +V++A +LEE+ + G P + ++ + + E E+
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 435 NEI 437
E+
Sbjct: 465 QEL 467
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++FTY LIK + D A F +ML+ CKP +N ++ +L L A
Sbjct: 297 APTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL-GRAGRLEDAL 355
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF PN +YN +++A F S A F KM G+ P +Y IL+ G
Sbjct: 356 KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDG 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++V +A+ LLE+M KGF P +Y +L++SL R K+ A +L +K
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSS 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y ++ F GR DA + +M GC P++ +Y L+ G+ GM D A M+
Sbjct: 476 ARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMR 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVG 390
M G +P + ++ G G
Sbjct: 536 NMRENGCTPDIKSHNIILNGLAKTG 560
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 141/335 (42%), Gaps = 38/335 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+ + + + L LI I + + ALK F M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N +++ + + A F+ +G+ P++ +Y I++ FC
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRK--------------------------- 249
+ A L +M E+G P +Y L+ L R
Sbjct: 422 VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAV 481
Query: 250 --------SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ AVDL +M G PD +Y L++ + R + EA+ L+ M+ G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI +N ++ G + G A ++ M + +P+ VSY T++ L GMF++A
Sbjct: 542 CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAA 601
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
K M+ M KGF + S++++ I VGKVDE C
Sbjct: 602 KLMREMKLKGFE-YDSITYSSI--LEAVGKVDEDC 633
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S+ TY ILI + +L + + +P P+ + LI + + A + F
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRN---YLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ + E NC + R+ +++ H L A DLF K G P+ +YN +M
Sbjct: 465 QELKE-NC---GRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSG 520
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G I A++L M E G PD++S+ I++ GL + RA+++ M +PD
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+SY T+L+ L R A KL+ MK+KG D + Y++++
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L G+ N +Y ++ C G +S A + M GV+ D +
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+M G CRK + A + ++M +G D ++YT L+N LCR +L+EA ++L M+ KG
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D V Y ++ G+C+ G+ +A V M PN+V+Y L GLC QG A
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M SKG + ++LI G C G +++A + ++ +AG P T+ I+ +
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C +E+++ +L E++ IK
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIK 562
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 38/350 (10%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I ++ L + A+K M + P ++ LL + A
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDE-GQVSDAVR 341
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + HGV+ + + +M FC GD++ A F++M +RG+ D +Y L+ GLC
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY---------------- 291
R ++ A +L++M +KG D ++YT L++ C+ K+ EA+
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 292 -------------------KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+LL M KG +I YN+++ G C+ G A + + DM
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +Y T++G LC D A +Q M+ KG P + L+ GFC G+V
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ +LE +L+ P+ T+ ++ Q C + M+ E+ ++ E+
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV 631
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 127/248 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A + + G+ + +Y +++ +C G ++ A+ + NKM ++ V P+V +Y
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L GLC++ V A +LL +M +KG + +Y +L+N LC+ L +A + + M G
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ Y T++ C+ A +L++M G P +V+Y L+ G C G + K
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M+ K P+ + ++L+K +C + + + +L P+E+T+ +++
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGH 645
Query: 422 CAGEEMEK 429
C M++
Sbjct: 646 CKARNMKE 653
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V PN +Y + C GD+ A L ++M +G+ ++ +Y L+ GLC+ + +A+
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ DM G PD +YTT++ +LC+ K+L A+ LL M KG P IV YN ++ GF
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR ++LE M PN +Y +L+ C + + + M+S+ P+
Sbjct: 576 CMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNE 635
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ + LIKG C + EA E+++ G
Sbjct: 636 NTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 156/371 (42%), Gaps = 2/371 (0%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D A+ FD ++ TY LI L RA + +L ++ + V
Sbjct: 368 KGDLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+T LI Y + A M++ P + + L + A +L
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC-AANELLHE 485
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ N +YN ++ C G++ A M E G+ PDV +Y ++ LC+ +
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++RA LL++ML+KG P ++Y L+N C ++ +LL M K +P+ YN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ +C E ++ + M S +PN +Y L+ G C A + MI KG
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
F S +ALI+ K EA + E++ K D + + + +E
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTL 725
Query: 432 EVLNEIVKVEI 442
+ +E+V+V +
Sbjct: 726 ALCDELVEVTL 736
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 178/380 (46%), Gaps = 36/380 (9%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP V KL+ ++ +P A IFD A + P + H + ++ +L K + I+
Sbjct: 9 SPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDL 68
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++++ + + IK YA+ ++PD+AL F++M+
Sbjct: 69 MRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMV----------------------- 105
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
D+F G P +S+N M+ AF + A F G+ P++++Y
Sbjct: 106 ------DIF------GCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYN 153
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL++ C+K Q + LL M G PD LSY TL+N+L + L +A +L M V+
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLCDQGMFDV 359
G NPD++ YN ++ GF R+G + A ++ + + + + P++ +Y ++ GLC G D
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDE 273
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+ + M SP ++I G G + A V +E++++G +P T+ ++
Sbjct: 274 SMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLS 333
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+ ++ K E+ N + K
Sbjct: 334 GLFRTGKLNKCFELWNVMSK 353
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 186/419 (44%), Gaps = 52/419 (12%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+ D + A EI+ + + S TY I+I G K L + + + + + +P
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPSVETYNIMIN--GLCKLGKLDESMEMWNRMKKNEKSPD 289
Query: 132 LFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
LFT+ I+ S + A K F+ M+E P + N +L L L F+L+
Sbjct: 290 LFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLF-RTGKLNKCFELW 348
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K+ N SYN++++ N + A + + ERG+ D +Y +L+ GLC+
Sbjct: 349 NVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK------------------------ 285
+N+A+ +LE+ N+G DT +Y+++++ LC+K
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467
Query: 286 -----------KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
KL EA +L MK K C P +V YNT++ G C+ R DA L++M
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE 527
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P++++Y L+ GLC D+A I+K P + + +I G C KVD
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
A + ++ + P +V E + K G+ + E +K+ RI+EAG+
Sbjct: 588 ALEIFTQMRQVNCVPD------LVTHNTIMEGLYKAGDCV-EALKIW----DRILEAGL 635
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 181/409 (44%), Gaps = 41/409 (10%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+A + L A E+FD S + Y ILI R F ++I L +E V
Sbjct: 194 LAKSGNLLDAVELFDEMSVR-GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTES-SV 251
Query: 129 TPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PS+ TY I I L D +++ + M + P + ++ L N+ A
Sbjct: 252 YPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNF-NAAE 310
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ-- 244
+F+ + G+ P+ ++YN M+ G ++ + L+N M + ++ SY +L+Q
Sbjct: 311 KVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGL 369
Query: 245 ---------------------------------GLCRKSQVNRAVDLLEDMLNKGFVPDT 271
GLC+ +N+A+ +LE+ N+G DT
Sbjct: 370 LDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT 429
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y+++++ LC+K L +A +L+ +MK + +N+++ G+ R + +A VL +
Sbjct: 430 FAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLRE 489
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M S C P +VSY T++ GLC F A ++ M+ +G P LI G C K
Sbjct: 490 MKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
VD A + + + P +I+ +C ++++ E+ ++ +V
Sbjct: 550 VDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 139/296 (46%), Gaps = 3/296 (1%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
+ ++TY +LI L + Y + IL ++E + ++ ++ + + ++A+
Sbjct: 390 LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAV 449
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ M + K N ++ V R + L A + + P SYN ++
Sbjct: 450 ELIHQMKKNRRKLNSHVFNSLINGYV--RAFKLEEAISVLREMKSKDCAPTVVSYNTIIN 507
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C S AY +M E G+ PD+ +Y +L+ GLCR +V+ A++L +NK P
Sbjct: 508 GLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKP 567
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + +++ LC +K+ A ++ +M+ C PD+V +NT++ G + G ++A K+
Sbjct: 568 DLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIW 627
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + G P+++SY GLC A +++ + +G P+ + L++
Sbjct: 628 DRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRA 683
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ L A +L K+ N+ +N ++ + + A ++ +M + P V S
Sbjct: 442 KGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVS 501
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ GLC+ + + A L++ML +G PD ++Y+ L++ LCR +K+ A L +
Sbjct: 502 YNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCI 561
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
K PD+ +N ++ G C + A ++ M C+P+LV++ T++ GL G
Sbjct: 562 NKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCV 621
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K ++ G P + KG C+ +V +A L + L G P+ TW ++V
Sbjct: 622 EALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
Query: 419 PQI 421
+
Sbjct: 682 RAV 684
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+++ +K + +F LI Y + + A+ R M +C P N I+ L
Sbjct: 450 ELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGL 509
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ A+ K + G+ P+ +Y++++ C + +A L+++ + + PD
Sbjct: 510 CKAERF-SDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
++ + I++ GLC +V+ A+++ M VPD +++ T++ L + EA K+
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWD 628
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
R+ G PDI+ YN G C R DA + L D G LPN ++ LV + D
Sbjct: 629 RILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVD 686
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 2/234 (0%)
Query: 220 AYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A LF M + G P + S+ ++ +Q A G P+ +Y L+
Sbjct: 97 ALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILI 156
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C+K++ + LL M G NPDI+ Y T++ + G +DA ++ ++M G
Sbjct: 157 KISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVN 216
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+++ Y L+ G +G F A + + +L+ P + +I G C +GK+DE+
Sbjct: 217 PDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESME 276
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+ + K ++P T+ ++ + +V E+++ + D R A
Sbjct: 277 MWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNA 330
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+Y +I L +A+ FS D ++LK + P + TY LI D AL +
Sbjct: 501 SYNTIINGLCKAERFS---DAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLW 557
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ KP + N I+ L T + + A ++F + +P+ ++N +M
Sbjct: 558 HQCINKRLKPDLQMHNIIIHGLCTAQK-VDVALEIFTQMRQVNCVPDLVTHNTIMEGLYK 616
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GD A +++++ E G+ PD+ SY I +GLC ++V+ A++ L D L++G +P+ +
Sbjct: 617 AGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPT 676
Query: 274 YTTLLNSLCRKKKLRE 289
+ L+ ++ K L E
Sbjct: 677 WNVLVRAVVDDKPLME 692
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 40/334 (11%)
Query: 130 PSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY I I A D A+K MLE N +P N I+ + Y+ AF
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC-REGYVDRAFQ 252
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ S G P+ +YNI++R G Y L + M RG +V +Y +L+ +C
Sbjct: 253 IISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVC 312
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R +V V LL+DM KG PD Y L+ +LC++ ++ A ++L M GC PDIV
Sbjct: 313 RDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIV 372
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL-------------------------- 341
+YNT++ C++ RA +A + E + GC PN
Sbjct: 373 NYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEM 432
Query: 342 ---------VSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVSHALIKGFCNVG 390
++Y +L+ LC GM D A + + M S P + ++ G C V
Sbjct: 433 LDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVS 492
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+V +A VL ++ G P+E T+ ++ I G
Sbjct: 493 RVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFG 526
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 5/339 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y +I RA +L +K++ + +P + TY LI + D AL+
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGF--SPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+L+ NCKP ++E + + A L + + P+ +YN ++R C G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGG-IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREG 245
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A+ + + + +G PDV +Y IL++GL + + +L+ DM+ +G + ++Y+
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYS 305
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
L++S+CR K+ E LL MK KG PD Y+ ++ C+EGR A +VL+ M S+
Sbjct: 306 VLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISD 365
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC+P++V+Y T++ LC Q D A + + G SP+ S +++ + G A
Sbjct: 366 GCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRA 425
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
G++ E+L G P T+ ++ +C +++ E+L
Sbjct: 426 LGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 4/313 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L Y +I + +N D A + M P N ++ L + R L A +
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCS-RGMLDSALE 182
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
K P +Y I++ A G I A L ++M E + PD+ +Y +++G+C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R+ V+RA ++ + +KG+ PD ++Y LL L + K Y+L+ M +GC ++V
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ CR+G+ + +L+DM G P+ Y L+ LC +G D+A + + +M
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEE 426
IS G P + ++ C + DEA + E+L + G +P+ ++ M G +
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422
Query: 427 MEKLGEVLNEIVK 439
+ LG +L + K
Sbjct: 423 VRALGMILEMLDK 435
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L HK V+ TK + + + + I + + L N PD+ +Y ++ G C
Sbjct: 83 LVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-----PDLIAYNAIITGFC 137
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL-------------------- 287
R ++++ A +L+ M NKGF PD ++Y L+ SLC + L
Sbjct: 138 RANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVV 197
Query: 288 ---------------REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
EA KLL M PD+ YN+++ G CREG A +++ +
Sbjct: 198 TYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSI 257
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S G P++++Y L+ GL +QG ++ + M M+++G + LI C GKV
Sbjct: 258 SSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKV 317
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+E G+L+++ K G P + ++ +C ++ EVL+ ++
Sbjct: 318 EEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ G +P+ +YN ++ C A ++F K+ E G P+ SY +
Sbjct: 355 AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFS 414
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--C 302
L RA+ ++ +ML+KG PD ++Y +L++ LCR + EA +LL M+++ C
Sbjct: 415 ALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSEC 474
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P +V YN V+LG C+ R DA +VL M GC PN +Y L+ G+ G + A+
Sbjct: 475 KPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARD 534
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNV 389
+++ S L K FC +
Sbjct: 535 LATTLVNMDAISEHSFER-LYKTFCKL 560
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G+ + + + +G PDV L+ GL +++A+ ++ + N G PD
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDL 126
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y ++ CR ++ AY++L RMK KG +PDIV YN ++ C G A +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ C P +V+Y L+ QG D A K + M+ P +++I+G C G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
VD A ++ + G AP T+ +++ + + E E+++++V
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMV 293
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 3/295 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + P FTY L+ + A K F SM+ KP IL T + L
Sbjct: 303 HGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYAT-KGALS 361
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
+G+ PN +NI+ AF I A +FNKM ++G+ P+V +Y L+
Sbjct: 362 EMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLI 421
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V+ A M+N+G P+ + +T+L+ LC K +A +L M +G +
Sbjct: 422 DALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIH 481
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++V +NT++ C EGR + A ++++ M G P+++SY L+ G C G D A K
Sbjct: 482 PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKL 541
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +M+S G P+ + L+ G+C G++D+A V +E+L G P T+ I+
Sbjct: 542 LDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTIL 596
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 6/319 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NRILELLVTHRNYLR 183
TP++ +Y L+K + + N + AL+ M + + P L N ++ T +
Sbjct: 163 TPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTE-GQVD 221
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A++LF G+ PN +Y I++ C + A +F +M ++GV P++ +Y L+
Sbjct: 222 KAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLI 281
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G Q V +L++M G PD +Y LL+ LC+K K EA KL M KG
Sbjct: 282 HGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIK 341
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+ Y ++ G+ +G + L+ M NG PN + + + M A
Sbjct: 342 PDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDI 401
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M +G SP+ LI C +G+VD+A +++ G AP+ + +V +C
Sbjct: 402 FNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461
Query: 424 GEEMEKLGEVLNEIVKVEI 442
++ EK GE+ E+V I
Sbjct: 462 IDKWEKAGELFFEMVNQGI 480
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 162/353 (45%), Gaps = 48/353 (13%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL--- 182
+ P++ TY I I ++ + DRA F+ M++ +P N + + H YL
Sbjct: 235 IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP-----NIVTYTCLIH-GYLSIG 288
Query: 183 --RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ + K HG+ P+ +Y +++ C G + A LF+ M +G+ PDV Y
Sbjct: 289 QWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYG 348
Query: 241 ILMQG-----------------------------------LCRKSQVNRAVDLLEDMLNK 265
I++ G +K+ + A+D+ M +
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ ++Y TL+++LC+ ++ +A +M +G P+IV + ++V G C + A
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M + G PN+V + T++ LC +G A++ + LM G P +ALI+G
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
C VGK DEA +L+ +L G P+E T+ ++ C ++ V E++
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEML 581
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+F + G+ PN +Y ++ A C G + A FN+M GV P++ + L+
Sbjct: 398 AMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVY 457
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + +A +L +M+N+G P+ + + T++ +LC + ++ +A +L+ M+ G P
Sbjct: 458 GLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI+ YN ++ G C G+ +A K+L+ M S G PN +Y TL+ G C G D A
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI--- 421
Q M+S G +P + ++ G + EA + ++ +G+ T+ +I+ +
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKN 637
Query: 422 -CAGEEMEKLGEVLNEIVKVEI 442
C E ++ + ++ ++V+I
Sbjct: 638 NCVDEALKMFQSLCSKDLQVDI 659
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRA 255
V P+ +Y+I++ FC G + + F + + G + DV L++GLC +V A
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 256 VD-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM---KVKGCNPDIVHYNT 311
+ LL M G P+ +SY TLL C + + EA +LL M +V+ C P++V YNT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
V+ GF EG+ A + DM G PN+V+Y ++ GLC + D A+ Q MI KG
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ LI G+ ++G+ E +L+E+ G P T+ +++ +C + +
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329
Query: 432 EVLNEIVKVEIKGDTRIVEAGIGLEDY 458
++ + +++ IK D I GI L Y
Sbjct: 330 KLFDSMIRKGIKPDVSIY--GIILHGY 354
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---RGVMPDVESYRILMQ 244
L + + G PN SYN +++ FC A L + M + R P++ SY ++
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G + QV++A +L DM ++G P+ ++YT +++ LC+ + + A + +M KG P
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+IV Y ++ G+ G+ + ++L++M ++G P+ +Y L+ LC +G A+K
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
MI KG P S+ ++ G+ G + E L+ ++ G +P+ + ++ CA
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV---FCAF 389
Query: 425 EEMEKLGEVLNEIVKVEIKG 444
+ +GE ++ K+ +G
Sbjct: 390 AKKAMIGEAMDIFNKMRQQG 409
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 3/320 (0%)
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K ++P++ Y I A L D A F M+ P ++ L T
Sbjct: 404 KMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTID 463
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A +LF G+ PN +N +M C G + A L + M G PD+ SY
Sbjct: 464 KW-EKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISY 522
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L++G C + + A LL+ ML+ G P+ +Y TLL+ CR ++ +AY + M
Sbjct: 523 NALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS 582
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G P +V YNT++ G + R +A ++ +M ++G ++ +Y ++ GL D
Sbjct: 583 NGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDE 642
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K Q + SK + +I G+ ++A + + G P T+ +I
Sbjct: 643 ALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAE 702
Query: 420 QICAGEEMEKLGEVLNEIVK 439
+ +E+ + +E+ K
Sbjct: 703 NLIEEGSLEEFDGMFSEMEK 722
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 163/366 (44%), Gaps = 14/366 (3%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE-HYPVTPSLF 133
A +IF+ +Q PN + +T + + KLGR +DD + + V P++
Sbjct: 398 AMDIFNKMRQQGLSPNVVNY-ATLIDALCKLGR------VDDAELKFNQMINEGVAPNIV 450
Query: 134 TYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+ +Y + ++A + F M+ P N I+ L T ++ A L
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK-AQRLIDL 509
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G P+ SYN ++R C G A L + M G+ P+ +Y L+ G CR +
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A + ++ML+ G P ++Y T+L+ L + ++ EA +L M G I YN
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G + +A K+ + + S +++++ ++G L G + A + + G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + + + G ++E G+ E+ K+G AP+ +V ++ ++ + G
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749
Query: 432 EVLNEI 437
L++I
Sbjct: 750 AYLSKI 755
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +YN ++ +C +G I AY++F +M G+ P V +Y ++ GL + + + A
Sbjct: 549 GLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEA 608
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M+ G +Y +LN L + + EA K+ + K DI+ +N ++
Sbjct: 609 KELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGA 668
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
++GR DA + + +NG +P++ +YR + L ++G + M G +P+
Sbjct: 669 LLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPN 728
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ + L++ G + A L ++ + + T M++ E K
Sbjct: 729 SLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAK 782
>gi|302780413|ref|XP_002971981.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
gi|300160280|gb|EFJ26898.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
Length = 294
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 3/259 (1%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + P L + LP+ +YN ++ C G + A LF M + DV Y
Sbjct: 26 NRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTGRVPEANRLFGDMKAKFCNLDVIMY 85
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ G C+ ++N A L +D L + +PD ++++TL+ C + +A +LL M
Sbjct: 86 SCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 145
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
C+PD+ Y ++V GFC+ GR ++A +VL+ M GC PN+V +L+GG C G +
Sbjct: 146 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVW--SLIGGFCGTGDLEE 203
Query: 360 AKKYMQ-LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A+K ++ L + ++ G C G++ A +LE + ++G P D +V ++
Sbjct: 204 ARKMLERLERDENCKADMFAYQVMMDGLCTTGRMSAALELLEAIKQSGTPPRHDIYVALI 263
Query: 419 PQICAGEEMEKLGEVLNEI 437
+C G+E+ K EVL E+
Sbjct: 264 RGLCQGKELGKALEVLEEM 282
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 123/216 (56%), Gaps = 2/216 (0%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ RG+ P++ +Y L G ++V+ + L+E+M +PD ++Y TL++ LC+
Sbjct: 2 RVIVRGIEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTG 61
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
++ EA +L MK K CN D++ Y+ ++ GFC+ R AC + +D LP++V++
Sbjct: 62 RVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFS 121
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
TLV G C+ G+ D A++ ++ M++ SP +L+ GFC VG++ EA VL+ + K
Sbjct: 122 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 181
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
G P+ W +I C ++E+ ++L + + E
Sbjct: 182 GCQPNV-VWSLI-GGFCGTGDLEEARKMLERLERDE 215
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%)
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
R+ V+G P++V YN++ GF R ++E+M + CLP++++Y TL+ GLC G
Sbjct: 2 RVIVRGIEPNMVTYNSLSHGFYMANRVDPTLLLMEEMRATKCLPDIITYNTLIDGLCKTG 61
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + M +K + + LI GFC + +++ AC + ++ LK P T+
Sbjct: 62 RVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQAILPDVVTFS 121
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+V C ++ +L E+V + D
Sbjct: 122 TLVEGYCNAGLVDDAERLLEEMVASDCSPD 151
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 176/361 (48%), Gaps = 5/361 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFS-LIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A ++ NF H +TY+ LI L F + I ++S + P+ + ++K
Sbjct: 80 QFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVK 139
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
I ++ + ++AL F + CKP N ++ L++ + +L+ G
Sbjct: 140 ILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMI-LMLMQEGHHEKIHELYHEMCNEGDC 198
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y++++ AF G A LF++M G+ P + Y L+ + KS +A+
Sbjct: 199 FPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLL-AIYFKSGDEKALG 257
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L+++M +KG P +YT L+ L + ++ +AY + M GC PD+V N ++ F
Sbjct: 258 LVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFG 317
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ + M S C PN+V+Y T++ L + + A + + M + G +P
Sbjct: 318 KAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSS 377
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
LI GFC +V++A +LEE+ + G P + ++ + + E E+ E
Sbjct: 378 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLE 437
Query: 437 I 437
+
Sbjct: 438 L 438
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 154/373 (41%), Gaps = 85/373 (22%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
+T L + K G K L+ ++ + P++FTY LIK +S + A F
Sbjct: 241 TTLLAIYFKSGDEKALGLVQEM------KDKGCAPTVFTYTELIKGLGKSGRVEDAYSVF 294
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA-FC 212
+ML+ CKP +N ++ + L A LF PN +YN +++A F
Sbjct: 295 LNMLKDGCKPDVVLINNLINIF-GKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFE 353
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
S A + F KM GV P +Y IL+ G C+ ++V +A+ LLE+M KGF P
Sbjct: 354 SKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 413
Query: 273 SYTTLLNSLCRKKKLR-----------------------------------EAYKLLCRM 297
+Y +L+N+L + K+ EA L M
Sbjct: 414 AYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEM 473
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL---------------- 341
K GCNPD+ YN ++ G R G +A L M NGC P+L
Sbjct: 474 KKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRP 533
Query: 342 -------------------VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS-PHFSVSHA 381
VSY T++G L GMF+ A K M+ M S+GF H + S
Sbjct: 534 EQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSI 593
Query: 382 LIKGFCNVGKVDE 394
L VGKVDE
Sbjct: 594 LEA----VGKVDE 602
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LIK + + AL TF + + P N +L L + + A +LF
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVE-DRVSEALNLFHQM 175
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN ++ +M C G I A L ++M E G+ P +Y ++ G+C+K
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 253 NRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++LL M +P+ + Y+ +++SLC+ + +A L M+ KG PD+ YN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++GFC GR DA ++L++M P++V+Y L+ +G F A++ M+ +G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ ++I GFC ++D A + + G +P+ T+ ++ C + ++
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 432 EVLNEIVKVEIKGDT 446
E+L+E+ + + DT
Sbjct: 416 ELLHEMTETGLVADT 430
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P N ++ V + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE-A 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF--------------------- 224
+L+ G++PNT +Y+ M+ FC + A +F
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 225 --------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
++M E G++ D +Y L+ G +N A+DLL++M++ G PD
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G E
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
LI G+C G+VD+ + E+ + G + T++ ++
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 117/211 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ P+ +YN M+ FC +G S A L +M ER + PDV +Y L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y+++++ C++ +L A + M KGC+P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ +NT++ G+C R D ++L +M G + + +Y TL+ G G + A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
Q MIS G P L+ G C+ GK+ +A
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSY 204
+ A+ F ML +PLP ++ +L+ RP L++ + + + S+
Sbjct: 61 EDAIDLFSDMLR--SRPLPSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
I+++ FC + A + F K+ + G+ PDV ++ L+ GLC + +V+ A++L M
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
P+ +++TTL+N LCR+ ++ EA LL RM G P + Y T+V G C++G +
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 325 ACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L M + +PN+V Y ++ LC G A+ M KG P +++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
GFC+ G+ +A +L+E+L+ +P T+ ++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ A+ M+E +P I++ + + + L K
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++PN Y+ ++ + C +G S A LF +M E+G+ PD+ +Y ++ G C +
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL++ML + PD ++Y L+N+ ++ K EA +L M +G P+ + Y+++
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC++ R A + M + GC PNL+++ TL+ G C D + + M G
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + LI GF VG ++ A +L+E++ +G P T ++ +C
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL---- 182
+P+L T+ LI Y + D ++ M E N ++ H YL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI-----HGFYLVGDL 446
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RG 231
A DL + G+ P+ + + ++ C NG + A +F M + G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV++Y IL+ GL + + A +L E+M ++G VPDT++Y+++++ LC++ +L EA
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M K +P++V + T++ G+C+ GR D ++ +M G + N ++Y TL+ G
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G + A Q MIS G P ++ G + ++ A +LE+L
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + N D A F M C P N +++ + +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR-IDDG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ +T +YN ++ F GD++ A L +M G+ PD+ + L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD +Y L++ L + K EA +L
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ + M S PN+V++ TL+ G C
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + + EE+++ +L ++
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKL 677
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL DML +P + + L+ + R ++ L +M+ K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
DI + ++ FC + A + G P++V++ TL+ GLC + A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M P+ L+ G C G++ EA +L+ +++ G P + T+ IV +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 422 C 422
C
Sbjct: 230 C 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ L A +F S PN ++ ++ +C G + LF +M RG++ + +
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G + +N A+D+ ++M++ G PDT++ +L L K++L+ A +L +++
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Query: 299 V 299
+
Sbjct: 679 M 679
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 179/363 (49%), Gaps = 9/363 (2%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS---EHYPVTPSLFTYL 136
+ F +A ++ +F+H ++TY+ LI L + L+D++ T++ V P+ ++ +
Sbjct: 109 QFFKWAGKRQHFQHDSTTYMALIRCLEES---GLVDEMWRTIQDMIRSPCSVGPAEWSEI 165
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+KI ++ + ++AL F + C P N ++ L++ H + +L+ G
Sbjct: 166 LKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLI-LMLMHEGHHEKIHELYNEICSEG 224
Query: 197 -VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P+T +Y+ ++ AF A+ LF++M E G+ P + Y ++ + ++V A
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ L+E+M KG P +YT L+ L + ++ +AY L M GC PD+V N ++
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSP 374
R GR DA K+ M S C PN+V+Y T++ + + + A + + M + G +P
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
LI GFC +V++A +LEE+ + G P + ++ + + E E+
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 435 NEI 437
E+
Sbjct: 465 QEL 467
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 123/265 (46%), Gaps = 4/265 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++FTY LIK + D A F +ML+ CKP +N ++ +L L A
Sbjct: 297 APTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL-GRAGRLEDAL 355
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF PN +YN +++A F S A F KM G+ P +Y IL+ G
Sbjct: 356 KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDG 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++V +A+ LLE+M KGF P +Y +L++SL R K+ A +L +K
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSS 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y ++ F GR DA + + GC P++ +Y L+ G+ GM D A M+
Sbjct: 476 ARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMR 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVG 390
M G +P + ++ G G
Sbjct: 536 NMRENGCTPDIKSHNIILNGLAKTG 560
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 140/335 (41%), Gaps = 38/335 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+ + + + L LI I + + ALK F M
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N +++ + + A F+ +G+ P++ +Y I++ FC
Sbjct: 362 DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR 421
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRK--------------------------- 249
+ A L +M E+G P +Y L+ L R
Sbjct: 422 VEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAV 481
Query: 250 --------SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ AVDL + G PD +Y L++ + R + EA+ L+ M+ G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI +N ++ G + G A ++ M + +P+ VSY T++ L GMF++A
Sbjct: 542 CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAA 601
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
K M+ M KGF + S++++ I VGKVDE C
Sbjct: 602 KLMREMKLKGFE-YDSITYSSI--LEAVGKVDEDC 633
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S+ TY ILI + +L + + +P P+ + LI + + A + F
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRN---YLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ + E NC + R+ +++ H L A DLF K G P+ +YN +M
Sbjct: 465 QELKE-NCG---RSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSG 520
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G I A++L M E G PD++S+ I++ GL + RA+++ M +PD
Sbjct: 521 MIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+SY T+L+ L R A KL+ MK+KG D + Y++++
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 10/348 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + Y V P +FT L+K + AE + R
Sbjct: 100 TYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRR 159
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCF 213
M E C P N +L+ L H + + A +L G P+ SY+ ++
Sbjct: 160 MTELGCAPHVFSYNILLKGLC-HESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFK 218
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GD AY+ +++M ERG++PDV +Y ++ LC+ +++A+D+L M+ G +PD ++
Sbjct: 219 EGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCIT 278
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y ++++ C + +EA +L +M G PD V Y +++ C+ GR I+A K+L+ M
Sbjct: 279 YNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMI 338
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+++Y TL+ G +G + + LM+ G P V LI VD
Sbjct: 339 KRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVD 398
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
A V ++ + P T+ ++ +C K G V + ++ +E
Sbjct: 399 VAMFVFSKMRQQRLTPDVVTYGTLIDGLC------KSGRVDDAMLNLE 440
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 3/245 (1%)
Query: 207 MMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++++ C S A + +M E G P V SY IL++GLC +S+ A++LL M +
Sbjct: 139 LLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADD 198
Query: 266 G--FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G PD +SY+T+++ L ++ +AY M +G PD+V YNT+V C+
Sbjct: 199 GGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMD 258
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A VL M NG +P+ ++Y ++V G C G A ++ M S G P +L+
Sbjct: 259 KAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLM 318
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C G+ EA +L+ ++K G P+ T+ ++ + ++ ++L+ +V+ I+
Sbjct: 319 DYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQ 378
Query: 444 GDTRI 448
D +
Sbjct: 379 PDRHV 383
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 7/221 (3%)
Query: 218 SIAYTLFNKMF---ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + FN+M + V P + +Y IL+ CR +++ L +++ KG+ + + +
Sbjct: 77 AAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIF 136
Query: 275 TTLLNSLCRKKKLREAYKL-LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T LL SLC +K+ A + L RM GC P + YN ++ G C E R+ +A ++L M
Sbjct: 137 TPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMA 196
Query: 334 SNG--CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+G C P++VSY T++ GL +G D A M+ +G P + ++ C
Sbjct: 197 DDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQA 256
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLG 431
+D+A VL ++K G P T+ IV C +G+ E +G
Sbjct: 257 MDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIG 297
>gi|357119238|ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Brachypodium distachyon]
Length = 732
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F +A RQ FRH + L L A + D + +++ PV+ T L++++
Sbjct: 151 FHWAGRQKGFRHCFPAFHALASLLSAAGLPAAADQLPDLIRAHGKPVSHPQLTLLVRLHT 210
Query: 142 ESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ P RAL T R EF+ +P NR+L L ++ A LF + GV P
Sbjct: 211 AARRPLRALYTLRRFRHEFSVQPQVHACNRVLGALAA-AGHVEDALKLFDEMSEGGVRPM 269
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++ I++RA G + +M + PDV Y L++ + R+ + + + E
Sbjct: 270 PVTFAIIVRALGHAGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIRVWE 329
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M G PD ++Y T++ LC + +A KL M+ KG D + ++V G+ +G
Sbjct: 330 EMGTDGVEPDAMAYATMVGGLCNAGMVEQAAKLFEEMRKKGLLVDRTVFASLVDGYVADG 389
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R D C+VL++M G +L +Y TL+GGLC G D A K Q+++ + P
Sbjct: 390 RVGDGCRVLKEMVDAGYRADLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSSETVS 449
Query: 381 ALIKGFCNVGKVDEACGVLEELLK 404
L+ + + G++ + G++++L++
Sbjct: 450 QLLVCYADKGEMIKIFGLVDKLVE 473
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 91/243 (37%), Gaps = 41/243 (16%)
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
YTL E V P V + ++ L V A+ L ++M G P +++ ++ +
Sbjct: 220 YTLRRFRHEFSVQPQVHACNRVLGALAAAGHVEDALKLFDEMSEGGVRPMPVTFAIIVRA 279
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L +++ RM+ + C PD+ Y +V R G +V E+M ++G P+
Sbjct: 280 LGHAGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIRVWEEMGTDGVEPD 339
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
++Y T+VG G CN G V++A + E
Sbjct: 340 AMAYATMVG-----------------------------------GLCNAGMVEQAAKLFE 364
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA------GIG 454
E+ K G + +V A + VL E+V + D GIG
Sbjct: 365 EMRKKGLLVDRTVFASLVDGYVADGRVGDGCRVLKEMVDAGYRADLGTYNTLIGGLCGIG 424
Query: 455 LED 457
ED
Sbjct: 425 RED 427
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
K F L+D L+ L+ P T L +L + +A++ F +M + +
Sbjct: 463 KIFGLVDK-LVELR---LPATDYLVDFLKLFACKDGRELKAVEVFDTMRQRGYYSV-STY 517
Query: 169 NRILELLVTHRNYLRPAFDLFKSAH-KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
N I+E L+ + + A LF+ P + +Y+ M+ F G+I A + +N M
Sbjct: 518 NIIIENLLKIKER-KKALLLFEEMQGSDDCKPESCTYSHMIPCFVEEGNIEEACSCYNSM 576
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKK 286
+ +P + +Y L++GLC+ ++N AV L+ D L N P YT + CR K
Sbjct: 577 MKAEWIPSISAYCSLVKGLCKIGEINAAVSLVTDCLGNVENGPMEFKYTLTILEACRSKS 636
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL--PNLVSY 344
+ K++ M G + + + + ++ GFC+ + +A KV M + N + Y
Sbjct: 637 PEKVMKVVDEMIELGYSVEEIIFCAIIYGFCKYATSTEARKVFSVMRDRNIISEANFIVY 696
Query: 345 RTLV 348
++
Sbjct: 697 EDML 700
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ +F+ + ++P++++ + ++ + G++ + L +K+ E + L
Sbjct: 429 AYKMFQIILQEELVPSSETVSQLLVCYADKGEMIKIFGLVDKLVELRLPATDYLVDFLKL 488
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK-VKGCN 303
C+ + +AV++ + M +G+ + +Y ++ +L + K+ ++A L M+ C
Sbjct: 489 FACKDGRELKAVEVFDTMRQRGYYSVS-TYNIIIENLLKIKERKKALLLFEEMQGSDDCK 547
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
P+ Y+ ++ F EG +AC M +P++ +Y +LV GLC G + A
Sbjct: 548 PESCTYSHMIPCFVEEGNIEEACSCYNSMMKAEWIPSISAYCSLVKGLCKIGEINAA 604
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 7/252 (2%)
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
I L+ E P + ++ + L+ YA+ + ++E P L L+L
Sbjct: 435 IILQEELVPSSETV-SQLLVCYADKGEMIKIFGLVDKLVELRL-PATDYLVDFLKLFACK 492
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM-FERGVMPDVE 237
A ++F + + G + +YNI++ + A LF +M P+
Sbjct: 493 DGRELKAVEVFDTMRQRGYY-SVSTYNIIIENLLKIKERKKALLLFEEMQGSDDCKPESC 551
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL--C 295
+Y ++ + + A M+ ++P +Y +L+ LC+ ++ A L+ C
Sbjct: 552 TYSHMIPCFVEEGNIEEACSCYNSMMKAEWIPSISAYCSLVKGLCKIGEINAAVSLVTDC 611
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
V+ P Y +L CR KV+++M G + + ++ G C
Sbjct: 612 LGNVEN-GPMEFKYTLTILEACRSKSPEKVMKVVDEMIELGYSVEEIIFCAIIYGFCKYA 670
Query: 356 MFDVAKKYMQLM 367
A+K +M
Sbjct: 671 TSTEARKVFSVM 682
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 39/375 (10%)
Query: 70 ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVT 129
A+ ++PL A + +P+F S + L+L L RA+ F+ + + +++ P++
Sbjct: 93 AAPAEPLHAARFLAWLRAKPSFAASADHFDALLLPLARARLFTHLWSLAADMRALGLPLS 152
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS F+ +I Y +S L D+A++ F + F C P+
Sbjct: 153 PSTFSAVISSYGQSRLTDQAVEVFNRLPRFGC---PQ----------------------- 186
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
T+ YN ++ A C NG + AY L +M +GV PD ++ L+ C
Sbjct: 187 ----------TTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAA 236
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ A L+DM +GF P L++ L R +L EA RM +G PD+ +
Sbjct: 237 GKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATF 296
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N++ C G A +L D S G P++ +Y+ ++ + G D A + +
Sbjct: 297 NSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALE 356
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G P S+ A+IK C G+ +A ++ G P+ +VM+V G +
Sbjct: 357 DGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRG---GR 413
Query: 430 LGEVLNEIVKVEIKG 444
E N +V++ G
Sbjct: 414 FVEAANYLVEMSEAG 428
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K GVLP+ ++N + A C +GD+ A L RG+ PD+ +Y++++ + + +++
Sbjct: 286 KEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRID 345
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L L G P Y ++ +LC+ + +A+ MK KG P+ Y +V
Sbjct: 346 EAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLV 405
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
R GR ++A L +M G P ++ ++V GL G D+A++ QL +S
Sbjct: 406 KMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRMEQLEMS 461
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 39/375 (10%)
Query: 70 ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVT 129
A+ ++PL A + +P+F S + L+L L RA+ F+ + + +++ P++
Sbjct: 89 AAPAEPLHAARFLAWLRAKPSFAASADHFDALLLPLARARLFTHLWSLAADMRALGLPLS 148
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS F+ +I Y +S L D+A++ F + F C P+
Sbjct: 149 PSTFSAVISSYGQSRLTDQAVEVFNRLPRFGC---PQ----------------------- 182
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
T+ YN ++ A C NG + AY L +M +GV PD ++ L+ C
Sbjct: 183 ----------TTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAA 232
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ A L+DM +GF P L++ L R +L EA RM +G PD+ +
Sbjct: 233 GKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATF 292
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N++ C G A +L D S G P++ +Y+ ++ + G D A + +
Sbjct: 293 NSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALE 352
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G P S+ A+IK C G+ +A ++ G P+ +VM+V G +
Sbjct: 353 DGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRG---GR 409
Query: 430 LGEVLNEIVKVEIKG 444
E N +V++ G
Sbjct: 410 FVEAANYLVEMSEAG 424
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K GVLP+ ++N + A C +GD+ A L RG+ PD+ +Y++++ + + +++
Sbjct: 282 KEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRID 341
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L L G P Y ++ +LC+ + +A+ MK KG P+ Y +V
Sbjct: 342 EAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLV 401
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
R GR ++A L +M G P ++ ++V GL G D+A++ QL +S
Sbjct: 402 KMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRMEQLEMS 457
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LIK + + AL TF + + P N +L L + + A +LF
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE-DRVSEALNLFHQM 175
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN ++ +M C G I A L ++M E G+ P +Y ++ G+C+K
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 253 NRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++LL M +P+ + Y+ +++SLC+ + +A L M+ KG PD+ YN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++GFC GR DA ++L++M P++V+Y L+ +G F A++ M+ +G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ ++I GFC ++D A + + G +P+ T+ ++ C + ++
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 432 EVLNEIVKVEIKGDT 446
E+L+E+ + + DT
Sbjct: 416 ELLHEMTETGLVADT 430
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P N ++ V + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE-A 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF--------------------- 224
+L+ G++PNT +Y+ M+ FC + A +F
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 225 --------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
++M E G++ D +Y L+ G +N A+DLL++M++ G PD
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G E
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
LI G+C G+VD+ + E+ + G + T++ ++
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 117/211 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ P+ +YN M+ FC +G S A L +M ER + PDV +Y L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y+++++ C++ +L A + M KGC+P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ +NT++ G+C R D ++L +M G + + +Y TL+ G G + A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
Q MIS G P L+ G C+ GK+ +A
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSY 204
+ A+ F ML +PLP ++ +L+ RP L++ + + + S+
Sbjct: 61 EDAIDLFSDMLR--SRPLPSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
I+++ FC + A + F K+ + G+ PDV ++ L+ GLC + +V+ A++L M
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
P+ +++TTL+N LCR+ ++ EA LL RM G P + Y T+V G C++G +
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 325 ACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L M + +PN+V Y ++ LC G A+ M KG P +++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
GFC+ G+ +A +L+E+L+ +P T+ ++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ A+ M+E +P I++ + + + L K
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++PN Y+ ++ + C +G S A LF +M E+G+ PD+ +Y ++ G C +
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL++ML + PD ++Y L+N+ ++ K EA +L M +G P+ + Y+++
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC++ R A + M + GC PNL+++ TL+ G C D + + M G
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + LI GF VG ++ A +L+E++ +G P T ++ +C
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL---- 182
+P+L T+ LI Y + D ++ M E N ++ H YL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI-----HGFYLVGDL 446
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RG 231
A DL + G+ P+ + + ++ C NG + A +F M + G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV++Y IL+ GL + + A +L E+M ++G VPDT++Y+++++ LC++ +L EA
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M K +P++V + T++ G+C+ GR D ++ +M G + N ++Y TL+ G
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G + A Q MIS G P ++ G + ++ A +LE+L
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + N D A F M C P N +++ + +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR-IDDG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ +T +YN ++ F GD++ A L +M G+ PD+ + L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD +Y L++ L + K EA +L
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ + M S PN+V++ TL+ G C
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + + EE+++ +L ++
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKL 677
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL DML +P + + L+ + R ++ L +M+ K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
DI + ++ FC + A + G P++V++ TL+ GLC + A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M P+ L+ G C G++ EA +L+ +++ G P + T+ IV +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 422 C 422
C
Sbjct: 230 C 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ L A +F S PN ++ ++ +C G + LF +M RG++ + +
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G + +N A+D+ ++M++ G PDT++ +L L K++L+ A +L +++
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Query: 299 V 299
+
Sbjct: 679 M 679
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 162/333 (48%), Gaps = 5/333 (1%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRA 149
+ S+ TY LI L + DD+ + +++E + P++ TY I+ +S + A
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENE--GIMPTVVTYNAMIHGLLQSGQVEAA 362
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
F M +P N +L L+ A LF G+ P +YNI++
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCK-AGSLKEALLLFGDLRHAGLAPTVLTYNILID 421
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
+C GD+ A L +M E+G +PDV +Y ILM+G + A + ++ML+KG P
Sbjct: 422 GYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D +Y T + + + +A++L M ++G + D V YN ++ G C+ G DA +
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M NG P+ ++Y L+ C++G+ A+K+ + MIS G +P I +C
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G + A G ++L+ G P+E T+ +++ +C
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 136/307 (44%), Gaps = 5/307 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKP 163
G K SL + +L+ H + P++ TY I I L D A + M+E C
Sbjct: 387 GYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGC-- 444
Query: 164 LPKQLNRILELLVTHRN-YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
LP + + +H L A + F G+ P+ +YN +RA G I+ A+
Sbjct: 445 LPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFR 504
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
L M G+ D +Y IL+ GLC+ +N A DL M++ G PD ++YT L+++ C
Sbjct: 505 LREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHC 564
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+ LREA K M G P V Y + +CR G A M G PN +
Sbjct: 565 ERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 624
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y L+ LC G +A ++ M+ +G P+ LI G C G ++A E+
Sbjct: 625 TYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEM 684
Query: 403 LKAGEAP 409
+ G P
Sbjct: 685 HQNGIHP 691
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 4/273 (1%)
Query: 130 PSLFTYLIKIYAESNLPDRAL--KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY I + N A+ + F ML +P N + +T + AF
Sbjct: 446 PDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELT-LGAIAKAFR 504
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ +T +YNI++ C G+++ A L KM G+ PD +Y L+ C
Sbjct: 505 LREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHC 564
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A +DM++ G P ++YT +++ CR+ L AY +M +G P+ +
Sbjct: 565 ERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 624
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ CR GR A + +M G +PN +Y L+ G C +G ++ A ++ M
Sbjct: 625 TYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEM 684
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
G P + AL KGF + G ++ A LE
Sbjct: 685 HQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLE 716
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
F HGV P+ K N ++R + +M + G+ P + +Y L+ +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249
Query: 249 KSQVNRAVDLLEDMLNKGF--VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ + ++ LL++M +G +P+ +++ ++ L RK L EA +++ M++
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF 309
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN ++ G +G A + +M + G +P +V+Y ++ GL G + A+
Sbjct: 310 T-YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M + G P ++L+ G+C G + EA + +L AG AP T+ +++ C +
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 427 MEKLGEVLNEIVK 439
+E+ + E+V+
Sbjct: 429 LEEARRLKEEMVE 441
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 163/334 (48%), Gaps = 5/334 (1%)
Query: 116 DILITL--KSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
DI+I L K E+ ++ L FT LI + + AL M++ +P L +
Sbjct: 632 DIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSL 691
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L N + A L S + G+ PN YN ++ C N D++ A +F M ++G
Sbjct: 692 LNGFC-QGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
++ D +Y L+ GLC + A LL DM+ + P+ + +T L+++ ++ L EA
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M + +P+I+ YN+++ GFC +GR DA + + M S GC P++V+Y TL+ G
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + K M +G + LI G+C GK++ A V ++ G P
Sbjct: 871 CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ +++ +C ++EK ++ ++ K ++ D
Sbjct: 931 VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 168/391 (42%), Gaps = 45/391 (11%)
Query: 117 ILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
I + + E + ++ L FT LI + + AL M++ P +L
Sbjct: 85 IYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHG 144
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VM 233
RN + AF L S K G PN YN ++ C NGD++IA L N+M ++G +
Sbjct: 145 FCL-RNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLA 203
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNK--------------GFV----------- 268
D+ +Y L+ GLC + +A +L DM + FV
Sbjct: 204 ADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQEL 263
Query: 269 ----------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
P+T++Y +L+N LC +L A K M KGC P++V YNT++ GFC+
Sbjct: 264 YKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCK 323
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R D K+ + M G + + +Y TL+ G C G VAK M+S G +P
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIIT 383
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+ G C G++ A ++ + + +++ +C +++E+ E+ +
Sbjct: 384 HCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLP 443
Query: 439 KVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469
+K D R I +G ++ PRR
Sbjct: 444 VEGVKPDARTYTIMI------LGLCKNGPRR 468
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 6/301 (1%)
Query: 149 ALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
AL F M++ +PLP R+L + R Y + G+ + S+ I
Sbjct: 49 ALDLFLEMVQ--SQPLPSVVDFTRLLTAIANLRRY-ETVIYFSQQMELFGISHDLYSFTI 105
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC +S+A ++ KM + G P + ++ L+ G C +++++ A L+ M+ G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDA 325
+ P+ + Y TL++ LC+ + A +LL M+ KG D+V YNT++ G C G A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++L DM P++ ++ L+ QG D A++ + M+ P+ ++LI G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
C G++ A + + G P+ T+ ++ C +E ++ + + + GD
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345
Query: 446 T 446
T
Sbjct: 346 T 346
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 1/282 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI S A + R M++ P +++ V N L A +L+K
Sbjct: 758 YNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-AKNLYKEM 816
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ V PN +YN ++ FC G + A +F+ M +G PDV +Y L+ G C+ +V
Sbjct: 817 IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ L +M ++G V D +Y TL++ C+ KL A K+ RM G PDIV YN +
Sbjct: 877 EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ C G+ A ++ED+ N ++++Y ++ G+C A + + KG
Sbjct: 937 LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+I G C G EA + + + G P E +
Sbjct: 997 KLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF LF + +P+ + ++ A I LF+KM G+ D+ S+ IL+
Sbjct: 599 AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
CR S+ + A+ LL M+ GF P ++ +LLN C+ + +EA L+ M G P
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YNTV+ G C+ +A ++ M G + + V+Y TL+ GLC+ G + A + +
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+ + P+ ALI F G + EA + +E+++ P+ T+ ++ C
Sbjct: 779 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A + R M + P +++ V N L A +L+K + + PNT +YN +
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGN-LDEAQELYKQMLQSSIGPNTVTYNSL 282
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C +G + A F+ M +G P+V +Y L+ G C+ +V + L + M +G
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
V DT +Y TL++ C+ KLR A + M G PDI+ + ++ G C G A
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
DM S +V+Y ++ GLC + A + + +G P +I G C
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462
Query: 388 NVGKVDEA 395
G EA
Sbjct: 463 KNGPRREA 470
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A KTF M C P N ++ R + LF+ ++ G++ +T +YN ++
Sbjct: 295 AKKTFDLMASKGCFPNVVTYNTLINGFCKSRR-VEDGMKLFQRMYREGLVGDTFTYNTLI 353
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+C G + +A +F+ M GV PD+ ++ IL+ GLC ++ A+ DM +
Sbjct: 354 HGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKY 413
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
++Y +++ LC+ K+ EA++L CR+ V+G PD Y ++LG C+ G +A ++
Sbjct: 414 LGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473
Query: 329 LEDMPSNG 336
M +G
Sbjct: 474 FRRMKEDG 481
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL +M+ +P + +T LL ++ ++ +M++ G
Sbjct: 36 LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D+ + ++ FCR R A +L M G P++V++ +L+ G C + A
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE-APHEDTWVMIVPQ 420
+ M+ G+ P+ V + LI C G V+ A +L E+ K G A T+ ++
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C E + +L ++ K I D
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDV 241
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 82/192 (42%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ + A L +ML +P + +T +L ++ + K L +M+ G + D+ +
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR R A +L M G P++V+ +L+ G C F A + M
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P+ + + +I G C ++ A + + K G T+ ++ +C
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 431 GEVLNEIVKVEI 442
+L ++VK +I
Sbjct: 775 ARLLRDMVKRKI 786
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
AK +FD + F TY LI ++K D + + + H + FTY
Sbjct: 844 AKHMFDLMVSKGCFPDV-VTYNTLITGFCKSKRVE--DGMKLFCEMTHQGLVGDAFTYNT 900
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI Y ++ + A K F M++ P N +L+ L + + A + + K+
Sbjct: 901 LIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNN-GKIEKALVMVEDLQKN 959
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ + +YNI+++ C N + A+ LF + +GV D +Y ++ GLCR A
Sbjct: 960 QMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREA 1019
Query: 256 VDLLEDMLNKGFVPDTLSYTTLL 278
L M GF+P Y L
Sbjct: 1020 DKLCTRMKEDGFMPSERIYDETL 1042
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%)
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
K +A+ L C M P IV + V+ + + + M + G +L S+
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
L+ C F +A + M+ GF P +L+ GFC + EA +++ + +
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
G P+ + ++ +C ++ E+ + K I D
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADA 755
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 179/345 (51%), Gaps = 5/345 (1%)
Query: 76 LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFT 134
+LA + F +AS+QP +RH Y +I L + K F + +L ++ ++ +T +F
Sbjct: 96 ILAYKFFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFV 155
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
+++ +A S + ++A++ M ++ C+P +L+ L + + ++ A LF+
Sbjct: 156 VVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGS-VKEAASLFEDMRV 214
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
P+ K + ++ +C G + A + +M E G PD+ Y L+ G ++
Sbjct: 215 R-FSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGD 273
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A DLL+++ KG P+ SYT L+ +LC ++K+ EA ++ M+ GC+ D+V Y +V
Sbjct: 274 AFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVS 333
Query: 315 GFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC+ R ID ++L+ M G +PN ++Y L+ + + K+ M M G
Sbjct: 334 GFCK-WRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCI 392
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P S+ + +I+ C +G+V+ E+ +G +P DT+V+++
Sbjct: 393 PDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMI 437
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 5/294 (1%)
Query: 129 TPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PSL FT L+ + + A M E +P N +L T + AF
Sbjct: 217 SPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATA-GKMGDAF 275
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
DL K + G PN SY I+++A C + A +F +M G DV +Y L+ G
Sbjct: 276 DLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGF 335
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +++ +L+ M+ KG +P+ L+Y L+ + +K++L E +L+ M+ GC PD+
Sbjct: 336 CKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDL 395
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN V+ C+ G +M +G P L ++ ++ G G A +Y +
Sbjct: 396 SIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKE 455
Query: 367 MISKGF--SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+ +G S + + L+ K++ A + ++ G + D+W + +
Sbjct: 456 MVERGLLSSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWI 509
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
++Y ILI L + + + ++ +T L+ + + + D+ + +S
Sbjct: 291 TSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQS 350
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL--FKSAHKHGVLPNTKSYNIMMRAFCF 213
M++ +P QL L L++ H K G +P+ YN+++R C
Sbjct: 351 MIQKG--HMPNQLT-YLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACK 407
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G+++ +N+M G+ P ++++ I++ G + A ++M+ +G +
Sbjct: 408 LGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLLSSRQY 467
Query: 274 --YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
LLN+L R +KL A L + KGC ++ + + G +AC D
Sbjct: 468 GILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWIHALFSNGHVKEACSYCLD 527
Query: 332 MPSNGCLPNLVSYRTLVGGL 351
M +P ++ L+ GL
Sbjct: 528 MMDADLMPKPETFAKLMRGL 547
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 163/370 (44%), Gaps = 36/370 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+ I + + ++ + ++ +I + +A+ + M
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N ++ L H ++R A + A + + PN SY ++ FC G+
Sbjct: 1279 FASGCDPDIITFNTLITGLC-HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1337
Query: 217 ISIAYTLF-----------------------------------NKMFERGVMPDVESYRI 241
+ +A L KM ER V PDV Y +
Sbjct: 1338 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1397
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + A ++LE+ML K PD Y TL++ R + L +A K+ M+ KG
Sbjct: 1398 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1457
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV N ++ G+C+ G +A + +M GC+P+ +Y T++ G QG + A
Sbjct: 1458 ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1517
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ MI + P+ +LI G+C G D A G+ + +P+ T+ +++ +
Sbjct: 1518 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSL 1577
Query: 422 CAGEEMEKLG 431
+++ + G
Sbjct: 1578 FKKDKVLRAG 1587
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLN 169
F +DD L ++ T + L+ YA++ + +A K + E + P N
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
R+L+LLV R + A L+ + S +++R C + L +
Sbjct: 1117 RLLKLLVEQRRW-DDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1175
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G +P V Y +L+ G CR+ + R + LL +M KGF+P ++Y +L+N L +K L +
Sbjct: 1176 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK 1235
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
L M+ +G +P++ YN+V+ C+ A A +L+ M ++GC P+++++ TL+
Sbjct: 1236 IGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLIT 1295
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC +G A+ +++ I + +P+ LI GFC G++ A +L E++ G P
Sbjct: 1296 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTP 1355
Query: 410 HEDTW-VMIVPQICAGEEMEKL 430
T+ +I + AG+ E L
Sbjct: 1356 DVVTFGALIHGLVVAGKVSEAL 1377
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQG 245
D +S G P ++ A+ G + A + ++ E+ G +P+V L++
Sbjct: 1062 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKL 1121
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + + A L ++ML K D S L+ LC ++++ E KL+ GC P
Sbjct: 1122 LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1181
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+CR G +L +M + G LP LV+Y +L+ L +G +
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1241
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +GFSP+ + +++I C +A +L+++ +G P T+ ++ +C
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1301
Query: 426 EMEKLGEVLNEIVKVEI 442
+ K L E ++ E+
Sbjct: 1302 HVRKAEHFLREAIRREL 1318
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 5/273 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
D+L+ + + TP + T+ LI + AL M E P N ++
Sbjct: 1343 DLLVEMMGRGH--TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 1400
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
L R L A ++ + + V P+ Y ++ F + ++ A +F M +G+
Sbjct: 1401 GLCKKR-MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGIC 1459
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PD+ S +++G C+ ++ A+ + +M G +PD +YTT+++ ++ L A +
Sbjct: 1460 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1519
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
LC M + C P++V Y++++ G+C+ G A + +M + PN+V+Y L+G L
Sbjct: 1520 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFK 1579
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ A Y + M+ SP+ H L+ G
Sbjct: 1580 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 124/311 (39%), Gaps = 51/311 (16%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+++ LI + + A MLE N +P +++ + N L A +F+
Sbjct: 1393 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN-LGDARKIFE 1451
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ P+ S N M++ +C G +S A + M + G +PD +Y ++ G ++
Sbjct: 1452 FMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1511
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+N A+ L DM+ + P+ ++Y++L+N C+ A L M+ + +P++V Y
Sbjct: 1512 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYT 1571
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------------- 351
++ ++ + + A E M N C PN V+ LV GL
Sbjct: 1572 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1631
Query: 352 -------------------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
C M A + M KG+ P+
Sbjct: 1632 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1691
Query: 381 ALIKGFCNVGK 391
+L+ GFC+VGK
Sbjct: 1692 SLLYGFCSVGK 1702
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 97/261 (37%), Gaps = 59/261 (22%)
Query: 124 EHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
EH + P + + +IK Y + + A+ +M + C P ++ N
Sbjct: 1454 EHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1513
Query: 182 ---LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
LR D+ K K PN +Y+ ++ +C GD A LF M + P+V +
Sbjct: 1514 NGALRWLCDMIKRKCK----PNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVT 1569
Query: 239 YRILMQGLCRKSQVNRAVDLLEDM--------------LNKGFV---------------- 268
Y IL+ L +K +V RA E M L G
Sbjct: 1570 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSE 1629
Query: 269 --------------------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
P +Y ++ SLCR LREA RM KG P+ +
Sbjct: 1630 VHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 1689
Query: 309 YNTVVLGFCREGRAIDACKVL 329
+ +++ GFC G++++ +L
Sbjct: 1690 FLSLLYGFCSVGKSVNWRTIL 1710
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 203/469 (43%), Gaps = 65/469 (13%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P Q S+ S P +P V L + DP A + + S+ PNF+H+ +Y L
Sbjct: 49 SKPNWQNNPSL-KSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASL 107
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY---------------------LIKIY 140
+ + K S + I++++ Y +LF L+ +
Sbjct: 108 LTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLL 167
Query: 141 AESNLPDRALKTFRSMLE----------------------------FNCKPL-----PKQ 167
A L D + + MLE F CK + P
Sbjct: 168 ARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDY 227
Query: 168 LNRILELLVTHRNY-LRPAFDLFKSAHKHGVLPNTK--SYNIMMRAFCFNGDISIAYTLF 224
+L R+ + AF +F+ +PN SYN ++ C G I A +LF
Sbjct: 228 FTSTSFILGYCRSKDVDSAFRVFEE------MPNRNEVSYNQLIHGLCEAGRIDEAVSLF 281
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+M + P+V +Y L++GLCRK+ V++A+ LL++ML + VPD ++Y +L+ CR
Sbjct: 282 VRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRA 340
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
L AY+LL MK +G PD Y + C+ R +A ++ + + G N++ Y
Sbjct: 341 GHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMY 400
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ G C G D A + M+SK SP+ +ALI G C+ G + EA + ++++K
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK 460
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
G P T+ +++ ++ + + + L +++ K R A I
Sbjct: 461 MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFI 509
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI E+ D A+ F M + C P +++ L R + A L
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC--RKNVHKAMGLLDEM 318
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ ++P+ +YN ++ C G + AY L + M ERG++PD +Y + LC+ ++V
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A L + + +G + + Y+ L++ C+ K+ EA L +M K C+P+ +N +
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G +A + + M G P + ++ L+G + QG FD A K +Q M+S G
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P +A I+ +C+ GKV EA ++ ++ + G P + T+ ++
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 8/312 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P FT I Y S D A + F M N N+++ L + A
Sbjct: 223 LSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSYNQLIHGLC-EAGRIDEA 277
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF PN +Y +++ C ++ A L ++M ER ++PD+ +Y L+ G
Sbjct: 278 VSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAG 336
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR ++ A LL M +G VPD +Y ++ LC+ ++ EA +L + +G + +
Sbjct: 337 QCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSAN 396
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y+ ++ G+C+ G+ +A + E M S C PN ++ L+ GLC G A
Sbjct: 397 VIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFD 456
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ G P + LI G D+A L++++ +GE P T+ + C+
Sbjct: 457 QMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAG 516
Query: 426 EMEKLGEVLNEI 437
++++ +++ ++
Sbjct: 517 KVQEAEDMMVQM 528
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 4/294 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY LIK N+ +A+ MLE N P N ++ +L A+
Sbjct: 291 PNVYTYTALIKGLCRKNV-HKAMGLLDEMLERNLVPDLITYNSLIAGQC-RAGHLDSAYR 348
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G++P+ ++Y + C + + A LF+ + E GV +V Y +L+ G C
Sbjct: 349 LLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYC 408
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +V+ A L E ML+K P+ ++ L++ LC L+EA L +M G P +
Sbjct: 409 KVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVY 468
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ ++G DA K L+ M S+G P +Y + C G A+ M M
Sbjct: 469 TFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQM 528
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+G P +LIK + +G A VL+ + A P T++ ++ Q+
Sbjct: 529 KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL 582
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 142/344 (41%), Gaps = 16/344 (4%)
Query: 97 TYLILILKLGRA---KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
TY LI L R K L+D++L + P L TY LI + D A +
Sbjct: 295 TYTALIKGLCRKNVHKAMGLLDEML------ERNLVPDLITYNSLIAGQCRAGHLDSAYR 348
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
M E P + ++ L N + A LF S + GV N Y++++ +
Sbjct: 349 LLSLMKERGLVPDQRTYGCFIDFLCK-SNRVEEARRLFDSLTEEGVSANVIMYSVLIDGY 407
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G + A LF KM + P+ ++ L+ GLC + A+ L + M+ G P
Sbjct: 408 CKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV 467
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ L+ + ++ +A+K L +M G P YN + +C G+ +A ++
Sbjct: 468 YTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQ 527
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G P+ +Y +L+ G+ A ++ M P +LIK +
Sbjct: 528 MKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRY 587
Query: 392 VDEACGV--LEELLKAGEAPHEDTWVMIVPQICAG--EEMEKLG 431
V E G +E + G+ P + W M+ I EEMEK G
Sbjct: 588 VVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHG 631
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 38/313 (12%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+++T+ LI + D A K + M+ KP+ + N +E+ + ++ A
Sbjct: 463 LKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS-AGKVQEA 521
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN---KMFERGVMPDVESYRIL 242
D+ + GV P+ +Y +++A+ G + + Y+ F+ MF+ P ++ L
Sbjct: 522 EDMMVQMKEEGVPPDDFTYTSLIKAY---GKLGLTYSAFDVLKSMFDADCEPSHHTFLSL 578
Query: 243 MQGLCRKSQV-----------------------------NRAVDLLEDMLNKGFVPDTLS 273
++ L K V + ++L E+M G PD+
Sbjct: 579 IKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKC 638
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L++ +C+ + L A KLL +M+ +G +P + +N V+ C+ + +A ++EDM
Sbjct: 639 YEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMI 698
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+G P L +TL+ GL ++G + + + G++ LI G G V+
Sbjct: 699 CSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVE 758
Query: 394 EACGVLEELLKAG 406
E + EE+ K G
Sbjct: 759 EFSQLFEEMEKNG 771
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 28/251 (11%)
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+D+++ +K E P +T LIK Y + L A +SM + +C+P +++
Sbjct: 522 EDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQ 581
Query: 175 LVTHRNYLRPA------------------------FD----LFKSAHKHGVLPNTKSYNI 206
L R + + FD LF+ KHG P++K Y
Sbjct: 582 LFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEK 641
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C ++ IA L ++M + G+ P + ++ C+ + A +++EDM+ G
Sbjct: 642 LISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSG 701
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P TL+ L + + + +++ G N D + + ++ G ++G +
Sbjct: 702 HSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFS 761
Query: 327 KVLEDMPSNGC 337
++ E+M NGC
Sbjct: 762 QLFEEMEKNGC 772
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 157/311 (50%), Gaps = 3/311 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+++TY L+ + D A + M + N P N +++ R+ +
Sbjct: 316 PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDS-SEVYS 374
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + K GV N +YNI+++ C G+++ A T +KM E G+ PD +Y L+ C
Sbjct: 375 LIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC 434
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ +A ++++M +KG DT + T+L+ LC +KKL EAY LLC +G D V
Sbjct: 435 KAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEV 494
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++LG+ ++ + A + ++M +P+ ++Y +++GGLC D A + M
Sbjct: 495 SYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEM 554
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G P + + +I GFC G V++A E+++ P T +++ +C +
Sbjct: 555 LENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGML 614
Query: 428 EKLGEVLNEIV 438
EK ++ N +V
Sbjct: 615 EKALKLFNTLV 625
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 177/384 (46%), Gaps = 7/384 (1%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK-SEHYPVTPSLF 133
P LA +IF+ R N+R + T L+ L R S I LK S V P+
Sbjct: 156 PHLATQIFNKMKRL-NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTN 214
Query: 134 TYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
++ I IY ES + D AL M EF C P N IL+ L+ R L+ A DL
Sbjct: 215 SFNILIYGYCLESKVKD-ALDWVNKMSEFGCVPDTVSYNTILDALLKRR-LLQEARDLLL 272
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ PN +YN+++ +C G + A + M ++P V +Y +L+ G C
Sbjct: 273 DMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG 332
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ A + ++M +PD ++Y TL++ + + E Y L+ M KG + V YN
Sbjct: 333 KIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYN 392
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ C++G +A L+ M NG P+ V+Y TL+G C G A + M M SK
Sbjct: 393 IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSK 452
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G + ++ C K+DEA +L K G E ++ +++ E+ ++
Sbjct: 453 GLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRA 512
Query: 431 GEVLNEIVKVEIKGDTRIVEAGIG 454
+ +E+ + +I T + IG
Sbjct: 513 LNLWDEMKERQIMPSTITYNSVIG 536
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 9/290 (3%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPL---PKQLNRILELLV 176
K E ++P TY LI Y ++ + K FR M E K L LN IL L
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAG---KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLC 469
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ L A++L SA K G + + SY I++ + + A L+++M ER +MP
Sbjct: 470 VEKK-LDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPST 528
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y ++ GLC+ +V++A+D L +ML G VPD +Y +++ C + + +A++
Sbjct: 529 ITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNE 588
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M PD+ N ++ G CREG A K+ + S G ++V+Y T++ LC +G
Sbjct: 589 MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGK 648
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
F+ A + M +K P +I + G++ EA +++++G
Sbjct: 649 FENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG 698
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 3/370 (0%)
Query: 78 AKEIFDYASRQPNFRHSNST--YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
K+ D+ ++ F T Y ++ L + + D+L+ +KS+ +
Sbjct: 229 VKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNM 288
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ Y L A K M N P N ++ + + AF + K
Sbjct: 289 LVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC-NDGKIDEAFRIRDEMEKM 347
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
VLP+ +YN ++ D S Y+L +M ++GV + +Y I+++ +C+K + A
Sbjct: 348 NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEA 407
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L+ M G PD ++Y TL+ + C+ K+ +A++++ M KG D NT++
Sbjct: 408 TTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHC 467
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C E + +A +L G + + VSY L+ G D A M + P
Sbjct: 468 LCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPS 527
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+++I G C KVD+A L E+L+ G P E T+ +I+ C +EK + N
Sbjct: 528 TITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHN 587
Query: 436 EIVKVEIKGD 445
E+++ K D
Sbjct: 588 EMIENLFKPD 597
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 126/264 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + G+ +T + N ++ C + AY L +RG + D SY IL+
Sbjct: 442 AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIL 501
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G + + +RA++L ++M + +P T++Y +++ LC+ +K+ +A L M G P
Sbjct: 502 GYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP 561
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D YN ++ GFC EG A + +M N P++ + L+ GLC +GM + A K
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLF 621
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
++SKG + +I C GK + A +L E+ P + T+ +I+ +
Sbjct: 622 NTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDA 681
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+++ E ++V+ I D +
Sbjct: 682 GRIKEAEEFTLKMVESGIVHDQNL 705
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 28/221 (12%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P TY I I+ E N+ ++A + M+E KP N +L L L
Sbjct: 559 LVPDETTYNIIIHGFCLEGNV-EKAFQFHNEMIENLFKPDVYTCNILLRGLC-REGMLEK 616
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G + +YN ++ + C G AY L +M + + PD +Y++++
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPD-----------------------TLSYTTLLNSL 281
L ++ A + M+ G V D +++Y+ +N L
Sbjct: 677 ALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINEL 736
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
C + K ++A L + +G + Y ++ G + ++
Sbjct: 737 CNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKS 777
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 206/440 (46%), Gaps = 50/440 (11%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P + S S SP S +++ + P A E F++ASR F H + +Y ++
Sbjct: 7 SKPWSTELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRN-GFAHDSRSYFMM 65
Query: 102 ILKLGRAKYFSLIDDILITLK---SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE 158
+ LGR ++ + L +++ + + L++ Y + L + A+K F
Sbjct: 66 LDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLF----- 120
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
L KS+ GV P+ ++N ++ G +
Sbjct: 121 ----------------------------SLMKSS---GVSPSVITFNSLLLILLKRGRTN 149
Query: 219 IAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
+A+++F++M GV PD ++ IL++G C+ S V+ ++M PD ++Y TL
Sbjct: 150 MAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTL 209
Query: 278 LNSLCRKKKLREAYKLLCRM--KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++ LCR K+R A+ ++ M K+K +PD+V Y T+V G+C + +A V E+M S
Sbjct: 210 VDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSR 269
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI-SKGFSPHFSVSHALIKGFCNVGKVDE 394
G PN ++Y TL+ GLC+ FD K+ + + +GF P + L+ C+ G DE
Sbjct: 270 GLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDE 329
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI----KGDTRIVE 450
A + +++ + P T+ +++ +C + E+ ++ +++ +I G T +V
Sbjct: 330 ALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVA 389
Query: 451 AGIGLEDYLI--GKTRSRPR 468
A + D+L GKT R
Sbjct: 390 AYNPIFDFLCKNGKTHKAER 409
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 170/373 (45%), Gaps = 53/373 (14%)
Query: 96 STYLILILKLGRAKY-FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
++ L+++LK GR S+ D++ T Y VTP +T+ LI+ + ++++ D +
Sbjct: 136 NSLLLILLKRGRTNMAHSVFDEMCGT-----YGVTPDTYTFNILIRGFCKNSMVDEGFRF 190
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH--GVLPNTKSYNIMMRA 210
F+ M FNC+P N +++ L +R A ++ K K + P+ +Y ++R
Sbjct: 191 FKEMSRFNCEPDVVTYNTLVDGLC-RAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRG 249
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN-KGFVP 269
+C +I A +F +M RG+ P+ +Y L++GLC + ++ ++L + +GFVP
Sbjct: 250 YCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVP 309
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---RAIDAC 326
DT +Y TL+N+ C EA K+ +MK PD Y+ ++ C+ G RA
Sbjct: 310 DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLF 369
Query: 327 KVLED----MPSNGCLPNLV----------------------------------SYRTLV 348
L D + +GC P + SY+TL+
Sbjct: 370 DKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLI 429
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C +G F+ K + M+ + + P F LI GF G+ A LE +LK+
Sbjct: 430 IGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYL 489
Query: 409 PHEDTWVMIVPQI 421
P + I+ ++
Sbjct: 490 PKTSVFHSILSEL 502
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 144/353 (40%), Gaps = 43/353 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ L RA + +++ + + ++P + TY L++ Y D AL F
Sbjct: 205 TYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFE 264
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ KP N +++ L + + + L + G +P+T +YN +M A C
Sbjct: 265 EMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDA 324
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL-----EDML--NKGF 267
G+ A +F KM E V PD +Y +L++ LC++ RA L ED+L + G
Sbjct: 325 GNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGC 384
Query: 268 VP----------------------------------DTLSYTTLLNSLCRKKKLREAYKL 293
P D SY TL+ C++ YKL
Sbjct: 385 TPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKL 444
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M + PD Y ++ GF ++G I A K LE M + LP + +++ L
Sbjct: 445 LLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLK 504
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ ++ LMI + + ++S ++ G +A ++E L G
Sbjct: 505 NDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNG 557
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 19/245 (7%)
Query: 161 CKPLPKQLNRILELLV----THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C PL N I + L TH+ A +F+ K G + SY ++ C G
Sbjct: 384 CTPLVAAYNPIFDFLCKNGKTHK-----AERVFRQLMKKGT-QDPPSYKTLIIGHCKEGT 437
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
Y L M R +PD E+Y +L+ G +K + A LE ML ++P T + +
Sbjct: 438 FEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHS 497
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDI---VHYNTVVLGFCREGRAIDACKVLEDMP 333
+L+ L + RE+ + M + +I H ++ G G I A +++E +
Sbjct: 498 ILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFG---SGLRIKAFQIVELLY 554
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
NG +V L+G +C G A+K + + KG + +V + +I+G C + +
Sbjct: 555 DNG---YMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPL 611
Query: 394 EACGV 398
EA G+
Sbjct: 612 EAFGL 616
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 206/453 (45%), Gaps = 54/453 (11%)
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
+S + +P S V+KL ++P + ++++ + N RHS TY +L L +A
Sbjct: 63 LSKNLNPFISFEVVKKL---DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMH 119
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN--CKPLPKQLN 169
L + +KS+ L +L+ +AE A E C + LN
Sbjct: 120 DLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVVNSLLN 179
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+++L + + A LF+ + +TK++NI++R C G A L M
Sbjct: 180 TLVKL-----DRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSG 234
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTTLLNSLCRKKKLR 288
G +PD+ +Y L++G C+ +++ +A ++ +D+ + G PD ++YT++++ C+ K++
Sbjct: 235 FGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQ 294
Query: 289 EAYKLL-----------------------------------CRMKVKGCNPDIVHYNTVV 313
EA LL +M GC PD+V + +++
Sbjct: 295 EASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+CR G+ ++ E+M + G PN +Y L+ LC + A++ + + SK
Sbjct: 355 DGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDII 414
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + + +I GFC GKV+EA ++EE+ K P + T+ +++ C M + +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 434 LNEIVKVEIKGD--------TRIVEAGIGLEDY 458
+++V + D + +++AG+ E Y
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 44/255 (17%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFS-LIDDILITLKSEHYPVTPSLF 133
A E+FD TY +I K G+ + S L+DD+L + YP T F
Sbjct: 260 ANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDML---RLGIYP-TNVTF 315
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
L+ YA++ A + M+ F C P +++ + F L++ +
Sbjct: 316 NVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYC-RVGQVNQGFRLWEEMN 374
Query: 194 KHGVLPNTKSYNIMMRA-----------------------------------FCFNGDIS 218
G+ PN +Y+I++ A FC G ++
Sbjct: 375 ARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A + +M ++ PD ++ IL+ G C K ++ AV + M+ G PD ++ ++LL
Sbjct: 435 EAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 279 NSLCRKKKLREAYKL 293
+ L + +EAY L
Sbjct: 495 SCLLKAGMAKEAYHL 509
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 54 NSKSPIGSPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
N S SP +++++ S+ +LA +F +A Q F+H+ S Y LI LG+ K F
Sbjct: 88 NEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFK 147
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
LI +++ +K + ++ F + + YA + A+ F M ++ K NR+L
Sbjct: 148 LIWNLVDDMKQKKL-LSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRML 206
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
++L RN + A +F K P+ KSY I++ + ++ ++ +M + G
Sbjct: 207 DILSKSRN-VGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGF 265
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV +Y I++ C+ + + AV +M + P + +L+N L +KKL +A +
Sbjct: 266 EPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 325
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG---------------- 336
R K G + YN +V +C R DA K +++M S G
Sbjct: 326 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLI 385
Query: 337 ----------------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
C P + +Y +V C++ D+A K M KG P +
Sbjct: 386 RMQRTKEAYEVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 445
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+LI C+ K+DEAC E+L G P
Sbjct: 446 SLITALCHENKLDEACEYFNEMLDVGIRP 474
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 112/244 (45%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K L + ++ ++ R + + A T F+KM + G + + ++ L + V
Sbjct: 157 KQKKLLSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVG 216
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A + + M K F PD SYT LL ++ L ++ MK +G PD+V Y ++
Sbjct: 217 DAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIII 276
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
+C+ + +A + +M C P+ + +L+ GL + + A ++ + S GF
Sbjct: 277 NAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFP 336
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+AL+ +C ++++A ++E+ G P+ T+ +I+ + + ++ EV
Sbjct: 337 LEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEV 396
Query: 434 LNEI 437
++
Sbjct: 397 YQKM 400
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
Q N + S + LI LG K + + KS +P+ + L+ Y S +
Sbjct: 297 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 356
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A KT M P + + IL L+ + + A+++++ K P +Y IM
Sbjct: 357 DAFKTVDEMRSKGIGPNARTYDIILHHLIRMQR-TKEAYEVYQ---KMSCEPTVSTYEIM 412
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R FC + +A ++++M +GV+P + + L+ LC +++++ A + +ML+ G
Sbjct: 413 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 472
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
P ++ L +L + + + L +M
Sbjct: 473 RPPGHLFSRLKQTLLDEGRKDKVADLAVKM 502
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 170/347 (48%), Gaps = 2/347 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V +++ Q++ LA + F +A Q + H+ ++Y L L R F D +
Sbjct: 130 TPNLVAEVLKVQTNHTLASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPEL 189
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHR 179
++S+ P + F LI++++++N R + M +F KP NR+++ LV
Sbjct: 190 MESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALV-RT 248
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+L A ++ + G++ + ++ ++++ C G I + +M ER PDV +Y
Sbjct: 249 GHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAY 308
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L++ L ++ + + E+M PD +Y T++ L + +++E Y+L MK
Sbjct: 309 TALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKG 368
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KGC D V Y +V F EG+ A +L+D+ S+G +L Y L+ GLC+
Sbjct: 369 KGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQK 428
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A K QL + +G P F L+ + +++E C +LE++ K G
Sbjct: 429 AYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLG 475
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 146/320 (45%), Gaps = 6/320 (1%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
+TP+L ++K+ L + S ++ N + L H + R A
Sbjct: 129 ITPNLVAEVLKVQTNHTLASKFFHWAGSQRGYHHNF--ASYNALAYCLNRHHQF-RAADQ 185
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQGL 246
L + G P+ K + I++R Y ++ KM + GV P V Y +M L
Sbjct: 186 LPELMESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDAL 245
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
R ++ A+ + +D+ G V +++++ L+ LC+ ++ E ++L RM+ + C PD+
Sbjct: 246 VRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDV 305
Query: 307 VHYNTVVLGFCREGRAIDAC-KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y +V G +DAC +V E+M + P++ +Y T++ GL G + +
Sbjct: 306 FAYTALVKILVPAGN-LDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFR 364
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M KG + AL++ F GKV+ A +L++L+ +G ++ ++ +C
Sbjct: 365 EMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLN 424
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
++K ++ V+ ++ D
Sbjct: 425 RVQKAYKLFQLTVREGLEPD 444
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 161/405 (39%), Gaps = 52/405 (12%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITL-KSEHYPVTPSL 132
LA ++D ++ + T+++L+ K GR ID++L L + P +
Sbjct: 253 LALSVYD-DLKEDGLVEESVTFMVLVKGLCKCGR------IDEMLEVLGRMRERLCKPDV 305
Query: 133 FTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
F Y L+KI + D L+ + M +P K ++ + + ++ ++LF+
Sbjct: 306 FAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMI-VGLAKGGRVQEGYELFR 364
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G L + Y ++ AF G + +A+ L + G D+ Y L++GLC +
Sbjct: 365 EMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLN 424
Query: 251 QVNRA-----------------------------------VDLLEDMLNKGFVPDTLSYT 275
+V +A LLE M GF P +
Sbjct: 425 RVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGF-PVIADLS 483
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+ L KK A + ++K KG + + YN + + G A + ++M
Sbjct: 484 KFFSVLVEKKGPIMALETFGQLKEKG-HVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGL 542
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
P+ +Y T + L D G A +I P + +L KG C +G++DEA
Sbjct: 543 SLKPDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEA 602
Query: 396 CGVLEELL-KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ + L + P E + + + C EK+ +VLNE+++
Sbjct: 603 MLLVRDCLGNVSDGPLEFKYSLTIIHACKSNVAEKVIDVLNEMIE 647
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 5/283 (1%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN--GDISIAYTLFNK 226
N + E+L N+ + + + G N SYN + A+C N A L
Sbjct: 132 NLVAEVLKVQTNHTLASKFFHWAGSQRGYHHNFASYNAL--AYCLNRHHQFRAADQLPEL 189
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKK 285
M +G P + + IL++ ++ R + E M NK G P Y ++++L R
Sbjct: 190 MESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTG 249
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
L A + +K G + V + +V G C+ GR + +VL M C P++ +Y
Sbjct: 250 HLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYT 309
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
LV L G D + + M P +I G G+V E + E+
Sbjct: 310 ALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGK 369
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
G + +V A ++E ++L ++V + D I
Sbjct: 370 GCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGI 412
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 6/239 (2%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ YAE+N + K M + P+ L++ +LV + + A + F +
Sbjct: 451 LLVAYAEANRMEEFCKLLEQMQKLGF-PVIADLSKFFSVLVEKKGPIM-ALETFGQLKEK 508
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G + + + YNI M + G++ A +LF++M + PD +Y + L ++ A
Sbjct: 509 GHV-SVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLVDLGEIKEA 567
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL--CRMKVKGCNPDIVHYNTVV 313
++ +P +Y++L LC+ ++ EA L+ C V P Y+ +
Sbjct: 568 CACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVRDCLGNVSD-GPLEFKYSLTI 626
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ C+ A VL +M GC + V Y +++ G+C G + A+K + + F
Sbjct: 627 IHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKVFSNLRERNF 685
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 24/298 (8%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D+L L S Y ++ LI+ N +A K F+ + +P + LL
Sbjct: 396 DLLKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEP---DFLTVKPLL 452
Query: 176 VTHR--NYLRPAFDLFKSAHKHG---VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
V + N + L + K G + +K +++++ G I +A F ++ E+
Sbjct: 453 VAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSVLVEK---KGPI-MALETFGQLKEK 508
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G + VE Y I M L + +V +A+ L ++M PD+ +Y T + L +++EA
Sbjct: 509 GHV-SVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLVDLGEIKEA 567
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL------VSY 344
R+ C P + Y+++ G C+ G +A ++ D CL N+ Y
Sbjct: 568 CACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVRD-----CLGNVSDGPLEFKY 622
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ C + + + MI +G S + ++I G C G ++EA V L
Sbjct: 623 SLTIIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKVFSNL 680
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 13/287 (4%)
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA-----FDLFKSAHKHG 196
ES D A + + M E P N +L Y R F+L++ + G
Sbjct: 2 ESGDXDGAERVYNEMAENKVSPDAVVYNAML------NGYFRVGRIKNCFELWELMGRKG 55
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
N S+NIMMR NG++ +++ M E G D +Y IL+ GLC+ N+++
Sbjct: 56 S-RNVASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSL 114
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+LE KG V D SY+ ++N LC++ KL EA +L M GC P+ YN ++ GF
Sbjct: 115 HVLEIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGF 174
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
+ DA +V +M ++ C PN+V+Y TL+ GLC F A ++ M+ KG+ P
Sbjct: 175 VGASKFEDATRVFREMGTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGV 233
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
S L+KG C K+D A + +++ G P +++ +C+
Sbjct: 234 STYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCS 280
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 2/287 (0%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
+ F + TY IL+ L + Y + +L + + + ++ +I + D
Sbjct: 87 ENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKLD 146
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+ M++ CKP N ++ V + A +F+ H PN +YN +
Sbjct: 147 EAVSVLSGMVKNGCKPNTHVYNALINGFVGASKF-EDATRVFREMGTH-CSPNIVTYNTL 204
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C AY L +M E+G P V +Y +LM+GLC +++ A++L ++ KGF
Sbjct: 205 INGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGF 264
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD + L++ LC K + A L M C P++V YNT++ GF ++G +A
Sbjct: 265 KPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALA 324
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+ + NG P+++SY + GLC A ++ ++K P
Sbjct: 325 IWAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVTKKLVP 371
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ ++ V P+ YN M+ + G I + L+ M +G +V S+ I+M+GL
Sbjct: 12 VYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGS-RNVASFNIMMRGLF 70
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V++ + + E M+ GF D+++Y L++ LC+ ++ +L + KG D
Sbjct: 71 DNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAF 130
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ G C+E + +A VL M NGC PN Y L+ G F+ A + + M
Sbjct: 131 SYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREM 190
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ SP+ + LI G C + EA +++E+L+ G P T+ +++ +C G ++
Sbjct: 191 GTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKL 249
Query: 428 EKLGEVLNEIVKVEIKGDTRI 448
+ + N+++ K D ++
Sbjct: 250 DMAINLWNQVIAKGFKPDVQM 270
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + K+G PNT YN ++ F A +F +M P++ +Y
Sbjct: 145 LDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREMGTH-CSPNIVTYNT 203
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + A DL+++ML KG+ P +Y+ L+ LC KL A L ++ KG
Sbjct: 204 LINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKG 263
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ +N ++ G C G+ A + +M C PNLV+Y TL+ G G A
Sbjct: 264 FKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNAL 323
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
++ G P + +KG C+ ++ A
Sbjct: 324 AIWAHILRNGLQPDIISYNITLKGLCSCNRISGA 357
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ LI + ++ + A + FR M +C P N ++ L + A+DL K
Sbjct: 166 VYNALINGFVGASKFEDATRVFREM-GTHCSPNIVTYNTLINGLCKGERF-GEAYDLVKE 223
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G P +Y+++M+ C + +A L+N++ +G PDV+ + IL+ GLC +
Sbjct: 224 MLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGK 283
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ L +M P+ ++Y TL+ + LR A + + G PDI+ YN
Sbjct: 284 TQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNI 343
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ G C R A L D + +P +++
Sbjct: 344 TLKGLCSCNRISGAILFLHDAVTKKLVPTIIT 375
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 1/243 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y + + + A G + + SY+ M+ C + A ++ + M + G P+ Y
Sbjct: 109 YANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYN 168
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ G S+ A + +M P+ ++Y TL+N LC+ ++ EAY L+ M K
Sbjct: 169 ALINGFVGASKFEDATRVFREM-GTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEK 227
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P + Y+ ++ G C + A + + + G P++ + L+ GLC G +A
Sbjct: 228 GWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLA 287
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
M +P+ + L++GF G + A + +L+ G P ++ + +
Sbjct: 288 LSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKG 347
Query: 421 ICA 423
+C+
Sbjct: 348 LCS 350
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C A ++ M +PD V YN ++ G+ R GR + ++ E M G N+
Sbjct: 1 CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGS-RNV 59
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
S+ ++ GL D G D +LMI GF L+ G C G +++ VLE
Sbjct: 60 ASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEI 119
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
G ++ ++ +C ++++ VL+ +VK K +T + A
Sbjct: 120 AEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNA 169
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 9/296 (3%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P ++ KL+ D + E+F +A Q + H Y +LI KLG A F D +L+
Sbjct: 77 TPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQ 136
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
+K E SLF ++K Y + LP +A + M ++C+P + N +L++
Sbjct: 137 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNLVLDVC---- 192
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+L A LF V T S G+I LF M +G+ P+ S
Sbjct: 193 -WLGIALRLFPMFSMRYVRKRTCS---KCSGLQLAGNIEKGLALFEDMMSKGLNPNNISC 248
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL+ GLCR + A++ L DM+++G PD ++Y +L+N LC+ + +EA L +++V
Sbjct: 249 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 308
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+G PD + YNT++ C+EG DA +L +G +PN V++ LV +G
Sbjct: 309 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 364
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 31/224 (13%)
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
++G + Y +L+ L + LL M +G V + ++ R
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163
Query: 289 EAYKLLCRMK-VKGCNPDIVHYNTVVLGFCREGRAI------------------------ 323
+A +LL M+ V C P YN +VL C G A+
Sbjct: 164 QATRLLLDMRGVYSCEPTFRSYN-LVLDVCWLGIALRLFPMFSMRYVRKRTCSKCSGLQL 222
Query: 324 -----DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ EDM S G PN +S L+ GLC G A ++++ MI +G +P
Sbjct: 223 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVT 282
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++LI G C G+ EA + ++L G P T+ ++ C
Sbjct: 283 YNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 326
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 144/266 (54%), Gaps = 4/266 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++ + +YN+ + A G + A + +M E+G+MPD ++ IL+ G CR RA
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRA 410
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
LL++M+ KG P ++YT+L+ L ++ +++EA L +++ +G PDI+ +N ++ G
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C G A ++L++M + LP+ ++Y TL+ G C +G + A++ + M +G P
Sbjct: 471 HCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD 530
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+ G + +A V +E++ G P T+ ++ +C +E E E+L
Sbjct: 531 HISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLK 590
Query: 436 EIVKVEIKGDT----RIVEAGIGLED 457
E+V I D I+EA ++D
Sbjct: 591 EMVSKGITPDDSTYLSIIEAMETVDD 616
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 1/325 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
T +F L++ Y E P+ AL+ F + E P + N++L L + N + A+ L
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLK-LNRTQMAWVL 203
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ + + + ++NIM+ C G + A M GV P+V +Y ++ G C
Sbjct: 204 YAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCL 263
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+ + RA + + M +KG PD +Y + ++ LC++ +L EA L+C+M G P+ V
Sbjct: 264 RGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN ++ G+C +G A ++M S G + +LV+Y + L +G A ++ M
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
KG P + LI G+C G A G+L+E++ G P T+ ++ + M+
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMK 443
Query: 429 KLGEVLNEIVKVEIKGDTRIVEAGI 453
+ + ++I + + D + A I
Sbjct: 444 EADALFSKIQQEGLLPDIIVFNALI 468
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Query: 171 ILELLVTHRNYLRPAF---------DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
I+ LVT+ ++ F ++ K + G++P+ ++NI++ +C GD A+
Sbjct: 352 IMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAF 411
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +G+ P + +Y L+ L +++++ A L + +G +PD + + L++
Sbjct: 412 GLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGH 471
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C + A++LL M PD + YNT++ G+CREG+ +A ++L++M G P+
Sbjct: 472 CANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDH 531
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+SY TL+ G +G A + M++ GF P +ALI+G C + + A +L+E
Sbjct: 532 ISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKE 591
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEME 428
++ G P + T++ I+ + +++E
Sbjct: 592 MVSKGITPDDSTYLSIIEAMETVDDLE 618
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 173/365 (47%), Gaps = 21/365 (5%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY--PVTPSLFTY--LIKIYAESN 144
PN N L L LKL R + + L +E + + SL+T+ +I + +
Sbjct: 179 PNIETCNQM-LSLFLKLNRTQ-------MAWVLYAEMFRMNIRSSLYTFNIMINVLCKEG 230
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD----LFKSAHKHGVLPN 200
+A + M KP N I+ H + LR F +F++ G+ P+
Sbjct: 231 KLKKAKEFIGHMETLGVKPNVVTYNTII-----HGHCLRGKFQRARVIFQTMKDKGLEPD 285
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YN + C G + A L KM E G++P+ +Y L+ G C K +++A +
Sbjct: 286 CYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRD 345
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M++KG + ++Y +++L + ++ +A ++ M+ KG PD V +N ++ G+CR G
Sbjct: 346 EMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCG 405
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A A +L++M G P LV+Y +L+ L + A + +G P V +
Sbjct: 406 DAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFN 465
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
ALI G C G +D A +L+E+ P E T+ ++ C ++E+ ++L+E+ +
Sbjct: 466 ALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRR 525
Query: 441 EIKGD 445
IK D
Sbjct: 526 GIKPD 530
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 22/380 (5%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILIL------KLGRAKYFSLIDDILIT 120
KL +Q +L E+F + N R S T+ I+I KL +AK F
Sbjct: 193 KLNRTQMAWVLYAEMF-----RMNIRSSLYTFNIMINVLCKEGKLKKAKEF--------I 239
Query: 121 LKSEHYPVTPSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
E V P++ TY I+ RA F++M + +P N + L
Sbjct: 240 GHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCK- 298
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
L A L + G++PN +YN ++ +C GD+ AY ++M +G+M + +
Sbjct: 299 EGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVT 358
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y + + L + ++ A +++++M KG +PD +++ L+N CR + A+ LL M
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG P +V Y +++ + R +A + + G LP+++ + L+ G C G D
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + ++ M + P + L++G+C GKV+EA +L+E+ + G P ++ ++
Sbjct: 479 RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+M+ V +E++
Sbjct: 539 SGYSKRGDMKDAFRVRDEMM 558
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 163 PLPK-QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P PK +N I L+++ R FD A T +++++RA+C + A
Sbjct: 107 PSPKPSINLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEAL 166
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
F + E+G +P++E+ ++ + ++ A L +M ++ ++N L
Sbjct: 167 ECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVL 226
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ KL++A + + M+ G P++V YNT++ G C G+ A + + M G P+
Sbjct: 227 CKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDC 286
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+Y + + GLC +G + A + M+ G P+ +ALI G+CN G +D+A +E
Sbjct: 287 YTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDE 346
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEME-KLGEVLNEIVKVEIKG 444
++ G T+ + + + ME ++G+ N I ++ KG
Sbjct: 347 MISKGIMASLVTYNLFIHALF----MEGRMGDADNMIKEMREKG 386
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY ++ + D AL + M + + N I++ L ++ ++ AF
Sbjct: 218 PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK-HIDDAFA 276
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +YN ++ C G S A L + M ER + P+V ++ L+
Sbjct: 277 LFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFV 336
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P++V
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R + ++ +M G + N V+Y TL+ GL G D+A+K + M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C GK+++A V E L K+ P T+ +++ +C ++
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 428 E 428
E
Sbjct: 517 E 517
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 171/383 (44%), Gaps = 3/383 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNS--TYLILILKLGRAKYFSLID 115
P+ S KL+++ + + R N R S +Y ILI R L
Sbjct: 76 PLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + Y + L+ Y S A+ M+E KP N ++ L
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGL 195
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
H N A L + G P+ +Y ++ C GDI +A +L KM + + D
Sbjct: 196 FLH-NKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y ++ GLC+ ++ A L M KG PD +Y +L++ LC + +A +LL
Sbjct: 255 VVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M + NP++V ++ ++ F +EG+ ++A K+ ++M P++ +Y +L+ G C
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D AK +LMISK P+ + LIKGFC +V+E + E+ + G + T+
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 416 MIVPQICAGEEMEKLGEVLNEIV 438
++ + + + ++ ++V
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMV 457
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 170/349 (48%), Gaps = 7/349 (2%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSML 157
L+ + + K F L+ I + + ++ ++ L++Y I I S LP AL M+
Sbjct: 86 LLSAIAKMKKFDLV--ISLGERMQNLRISYDLYSYNILINCFCRRSQLP-LALAVLGKMM 142
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+ +P L+ +L H + A L + G P+T ++N ++ +
Sbjct: 143 KLGYEPDIVTLSSLLNG-YCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKA 201
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
S A L ++M +RG PD+ +Y ++ GLC++ ++ A+ LL+ M D + Y T+
Sbjct: 202 SEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 261
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ LC+ K + +A+ L +M+ KG PD+ YN+++ C GR DA ++L +M
Sbjct: 262 IDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKI 321
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
PN+V++ L+ +G A+K MI + P +LI GFC ++DEA
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ E ++ P+ T+ ++ C + +E+ E+ E+ + + G+T
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +FTY LI + + D A F M+ +C P N +++ + +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR-VEEG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +YN +++ GD +A +F KM GV PD+ +Y IL+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + PD +Y ++ +C+ K+ + + L C + +KG P+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y T++ GFCR+G +A + +M +G LP+ Y TL+ G + + ++
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 594
Query: 366 LMISKGF 372
M S GF
Sbjct: 595 EMRSCGF 601
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 152/352 (43%), Gaps = 3/352 (0%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G KY + D + K E + P +FTY LI A + +M+E P
Sbjct: 264 GLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINP 323
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++ V L A L+ K + P+ +Y+ ++ FC + + A +
Sbjct: 324 NVVTFSALIDAFVKE-GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F M + P+V +Y L++G C+ +V ++L +M +G V +T++Y TL+ L +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
A K+ +M G PDI+ Y+ ++ G C+ G+ A V E + + P++ +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C G + + KG P+ + +I GFC G +EA + E+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
+ G P + ++ + E++ E+ GD + I +
Sbjct: 563 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF + LP+ +N ++ A + +L +M + D+ SY I
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ PD ++ ++LLN C K++ +A L+ +M G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V +NT++ G +A +A +++ M GC P+LV+Y +V GLC +G D+A
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + + +I G C +D+A + ++ G P T+ ++ +
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+ +++ +I
Sbjct: 301 CNYGRWSDASRLLSNMIERKI 321
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 137/299 (45%), Gaps = 3/299 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI + + A K + M++ + P + ++ H + L A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEA 379
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ PN +YN +++ FC + LF +M +RG++ + +Y L+QG
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + A + + M++ G PD ++Y+ LL+ LC+ KL +A + ++ PD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C+ G+ D + + G PN++ Y T++ G C +G+ + A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P + LI+ G + +++E+ G T M++ + G
Sbjct: 560 EMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNI---MMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
LR A LF GV + SY+ + R N + A LF +M + +P +
Sbjct: 26 LRKASPLFSL---RGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVE 82
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ + + + + + L E M N D SY L+N CR+ +L A +L +M
Sbjct: 83 FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PDIV ++++ G+C R DA +++ M G P+ V++ TL+ GL
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 202
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+ +G P A++ G C G +D A +L+++ K + I+
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKG 444
+C + ++ + N K+E KG
Sbjct: 263 DGLCKYKHIDDAFALFN---KMETKG 285
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVN----RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
RGV SY + L R + +N A+ L +M+ +P + + LL+++ + K
Sbjct: 36 RGVYFSAASYD-YREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMK 94
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
K L RM+ + D+ YN ++ FCR + A VL M G P++V+
Sbjct: 95 KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLS 154
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+L+ G C A + M+ G+ P + LI G K EA +++++++
Sbjct: 155 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR 214
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
G P T+ +V +C +++ +L ++ K +I+ D I
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 1/294 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI + + ++L + + + + LI + AL F M
Sbjct: 51 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 110
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
CKP N ++ + N A L++ GV+ NT +YN ++ AF G
Sbjct: 111 SSKGCKPDIFTFNSLI-FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 169
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L N M RG D +Y L++ LCR + + + L EDM++KG P+ +S
Sbjct: 170 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 229
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N LCR ++ A + L M +G PDIV YN+++ G C+ GRA +A + + + G
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
P+ ++Y TL+ C +GMFD A + + GF P+ + L+ F G
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 124/241 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A ++ G+ N YN ++ A C + + A +F M +G PD+ ++
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ A+ L +DML +G + +T++Y TL+++ R+ ++EA KL+ M +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ CR G + EDM S G PN +S L+ GLC G A
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++++ MI +G +P ++LI G C G+ EA + ++L G P T+ ++
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304
Query: 422 C 422
C
Sbjct: 305 C 305
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
SML C P N ++ L + + YL A +L G PN +Y I++ FC
Sbjct: 3 ESMLSVGCGPDIFTYNTLI-LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 61
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A + ++M +G+ + Y L+ LC+ +V A+++ DM +KG PD +
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ +L+ LC+ K EA L M ++G + + YNT++ F R G +A K++ DM
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC + ++Y L+ LC G + + M+SKG +P+ + LI G C G +
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
A L +++ G P T+ ++ +C + + E LN K++++G
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLC---KTGRAQEALNLFDKLQVEG 289
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 163/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + ++ +I
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y + + ++K F+ M E GV
Sbjct: 88 DSYGKEGIVQESVKLFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+ + + G +A FNKM G+ P ++ +++ G +V A
Sbjct: 112 ERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N CR KK+ EA K MK K P +V Y T++ G+
Sbjct: 172 FFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
+ DA +++E+M G PN ++Y TL+ GLC+ A+ ++ M+ K +P
Sbjct: 232 SVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI C VG +D A VL+ +++ + +++ C + ++ ++L++
Sbjct: 292 SIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + LF KM E GV ++SY L + + R+ +
Sbjct: 73 KKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A ML++G P ++ ++ K+ A + MK + +PD++ YNT++
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMI 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+CR + +A K +M P +V+Y TL+ G D A + ++ M G
Sbjct: 193 NGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM-IVPQICAGEEMEKLGE 432
P+ L+ G CN K+ EA +L+E++ AP +++ M ++ C ++ +
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAAD 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E+Y
Sbjct: 313 VLKAMIRLSVP--TEAGHYGVLIENY 336
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 95 NSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFR 154
NS ++ LI + D+L + P + LI+ Y ++ D+A+K
Sbjct: 291 NSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLD 350
Query: 155 SMLEFN--CKPL------PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
++E + +P P N I+E L + + A L + K GV T + N
Sbjct: 351 KLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSK-AEALVRQLMKLGVQDPT-ALNT 408
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R G A+ L M R V + +Y L+Q +KS+ A L+ M+
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIEND 468
Query: 267 FVPDTLSYTTLLNSL 281
+PD+ + +++ SL
Sbjct: 469 HLPDSSLFRSVMESL 483
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 152/301 (50%), Gaps = 3/301 (0%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY + + + D A M + +P N I++ L ++ ++ A +
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALN 72
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK G+ PN +Y+ ++ C G S A L + M ER + PDV ++ L+
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + P ++Y++L+N C +L EA ++ M K C PD+V
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R + +V +M G + N V+Y L+ GL G D+A++ + M
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ + L+ G C GK+++A V E L ++ P T+ +++ +C ++
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 312
Query: 428 E 428
E
Sbjct: 313 E 313
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 132/243 (54%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +Y +++ C GD +A+ L NKM + + P V Y ++ GLC+ ++ A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L ++M KG P+ ++Y++L++ LC + +A +LL M + NPD+ ++ ++
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
F +EG+ ++A K+ ++M P++V+Y +L+ G C D AK+ + M+SK P
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LIKGFC +V+E V E+ + G + T+ +++ + + + E+
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 436 EIV 438
E+V
Sbjct: 251 EMV 253
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 142/270 (52%), Gaps = 4/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI + + D A + F M+ +C P N +++ ++ +
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR-VEEG 210
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F+ + G++ NT +YNI+++ GD +A +F +M GV P++ +Y L+ G
Sbjct: 211 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 270
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + P +Y ++ +C+ K+ + + L C + +KG PD
Sbjct: 271 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 330
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ GFCR+G +A + ++M +G LPN Y TL+ G + + + ++
Sbjct: 331 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 390
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M S GF+ S + L+ + G++D++
Sbjct: 391 EMRSCGFAGDAS-TIGLVTNMLHDGRLDKS 419
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%)
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +G PD+ +Y +++ GLC++ + A +LL M P L Y T+++ L
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ K + +A L M+ KG P++V Y++++ C GR DA ++L DM P++
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
++ L+ +G A+K M+ + P +LI GFC ++DEA + E
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ P T+ ++ C + +E+ EV E+ + + G+T
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 151/280 (53%), Gaps = 2/280 (0%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C+P N ++ L + +R A L + + G+ P+ ++N ++ C I A
Sbjct: 469 CRPTLVTYNTLVTGL-SKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ +F + ERG P+V +Y L+ GL + ++++ A+ LL M+ G +T++Y+T+++
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L + ++ +A +L +M+ GC PD V YNT++ GF + R +A +L +M G P+
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 647
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+V+Y TL GLC G FD A + + M ++G +P+ +++ G C G+V EA G E
Sbjct: 648 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 707
Query: 401 ELLKAG-EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ + APH + ++ +C +++ E L +++
Sbjct: 708 KMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIR 747
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 123/216 (56%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN+++ C G + A+T F K + G P V +Y ++ GLCR ++V++ LLE+M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+G P+ ++Y TL+N+L + + +EA+ LL RM GC P+++ + ++ G C+EG
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +V+++M G +P++ + L+ LC+ G D A + Q ++ GF+P + +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G G+++ A VL+ L ++ +P T+ + V
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAV 218
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A FR ++F +P + +++ L N + L + G PN +YN ++
Sbjct: 20 AFTAFRKAIQFGFRPTVVTYSTVIDGLC-RDNEVDKGCKLLEEMAGRGCAPNAVTYNTLV 78
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A G A++L +M G P++ ++ ++++GLC++ ++ A ++++M+++GFV
Sbjct: 79 NALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFV 138
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +T LL++LC ++ EA+ ++ + G PD V YNT+V G + GR A V
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ + + P + ++ V GL G A ++ M G SP+ ALI G C
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258
Query: 389 VGKVDEACGVLEE 401
GK+D A G+L +
Sbjct: 259 AGKLDIALGLLRD 271
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 42/387 (10%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
ST + +LK+GR + D +++ + P TY LI + + A+
Sbjct: 582 STVVDGLLKVGRME-----DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 636
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R MLE P + L + A ++ G PN +Y+ ++ C
Sbjct: 637 REMLEAGFHPSVVTYTTLCHGLCRSGRF-DEAVEILDYMAARGCAPNAITYSSIVDGLCK 695
Query: 214 NGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G ++ A F KM + V P V +Y L+ GLC+ +++ A + LE M+ G +PD +
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV 755
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+++ L+N LC ++ +L C M +GC DI YN ++ +C +G A +LE+M
Sbjct: 756 TFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY----------------------------- 363
++G N V++ ++ LC D A Y
Sbjct: 816 KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQ 875
Query: 364 ----MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
++ M++ G SP ++ G G + A +L+E+ G +P T+ +++
Sbjct: 876 ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMIS 935
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +++ + E+++ +K D
Sbjct: 936 GLSKAKQLPLACDYFEEMLRKNLKPDA 962
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 5/253 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+LF + G + +YN M+ A+C G+ S AY L +M G+ + ++ I+++
Sbjct: 773 GLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIK 832
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC +++ AV + D +SY TL+ SL ++ +A +LL M G +P
Sbjct: 833 ALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSP 890
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D +Y TV+ G + G A K+L++M S G P+L +Y ++ GL +A Y
Sbjct: 891 DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYF 950
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ K P V +LI FC KVD+A +L +G P + +V +C
Sbjct: 951 EEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKN 1007
Query: 425 EEMEKLGEVLNEI 437
+K EV+ E+
Sbjct: 1008 RGTDKALEVIREM 1020
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 169/412 (41%), Gaps = 70/412 (16%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +LI L +A + D K+ + P++ TY +I N D+ K
Sbjct: 3 TYNVLINGLCKAG--RVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M C P N ++ L+ + + AF L + +G P ++ ++++ C
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALL-GQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G+I A+ + ++M +RG +PDVE + +L+ LC +V+ A + +L GF PD ++Y
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 275 TTLLNSLCRKKKLREA-----------------------------------YKLLCRMKV 299
T+++ L + +L A Y+ M
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG----------------------- 336
G +P+ V Y+ ++ G C+ G+ A +L D S
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299
Query: 337 ------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
C+PN+V + +L+ GLC D A + +M G S + L+KG C +
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359
Query: 391 KVDEACGVLEELLKA-GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
++ EA +E + + G +P+ T+ ++ +C + + EV +V VE
Sbjct: 360 RIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVE 411
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 31/383 (8%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E FD + Q + TY LI L +A +D L L+ ++ F+ L+
Sbjct: 230 AYEFFD-SMPQTGVSPNTVTYDALIDGLCKA---GKLDIALGLLRDKNSQAGMFAFSSLL 285
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+++ + A++ ++M C P N ++ L R + AF+LF + G
Sbjct: 286 HGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARR-VDEAFELFDVMKESGC 341
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAV 256
+ +YNI+++ C I AY M G P+V ++ L+QGLC +VN+A
Sbjct: 342 SADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAW 401
Query: 257 DLLEDMLN-KGFVPDTLSYTTLLNSLCR---KKKLREAYKLLCR---------------- 296
++ E M+ +G P+ +Y LL LC+ ++L + ++ +
Sbjct: 402 EVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEV 461
Query: 297 --MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+ V+ C P +V YNT+V G + G DA +LE M +G P+++++ +++ GLC +
Sbjct: 462 DFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKE 521
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A + + +G P+ LI G + K+DEA +L ++++ G + T+
Sbjct: 522 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 581
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
+V + ME VL ++
Sbjct: 582 STVVDGLLKVGRMEDAVVVLRQM 604
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 34/345 (9%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRP 184
V+P+ TY LI ++ D AL R + N + + +L L HR L
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHR--LEE 296
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L K+ +PN +N +M C + A+ LF+ M E G DV +Y IL++
Sbjct: 297 AIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353
Query: 245 GLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGC 302
GLC+ ++ A +E M +G P+ ++++TL+ LC ++ +A+++ RM V+G
Sbjct: 354 GLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGI 413
Query: 303 NPDIVHYNTVVLGFCREG--RAIDAC--KVLE-------DMPSNG----------CLPNL 341
+P+ Y ++ G C+ G R ++ C ++LE P + C P L
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y TLV GL GM A ++ MI G SP ++++ G C ++ +A V +
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
L+ G P+ T+ ++ + +M++ ++L ++V++ + +T
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ LI ++ D L+ F M E CK N ++ + A+ L +
Sbjct: 757 FSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF-SAAYALLEEM 815
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK-------------------------- 226
HG+ NT ++ I+++A C N I A + F+
Sbjct: 816 KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQ 875
Query: 227 -------MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
M G PD +Y +M GL + A LL++M ++G PD +YT +++
Sbjct: 876 ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMIS 935
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
L + K+L A M K PD + Y++++ FC+ + DA K+L S+G P
Sbjct: 936 GLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEP 992
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ Y T+V LC D A + ++ M SK P + +L + G+VDEA ++
Sbjct: 993 TITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLV 1052
Query: 400 EEL 402
+L
Sbjct: 1053 NDL 1055
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%)
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y L+N LC+ ++ +A+ + G P +V Y+TV+ G CR+ CK+LE+
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M GC PN V+Y TLV L QG A ++ M + G P +IKG C G+
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ A V++E++ G P + +++ +C
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALC 152
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G C+ GR DA G P +V+Y T++ GLC D K ++
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G +P+ + L+ G+ EA +LE + G P T+ +I+ +C
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 426 EMEKLGEVLNEIV 438
E+E V++E+V
Sbjct: 121 EIEAAFRVVDEMV 133
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 2/319 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + P T + T + ++ E + + + R M+E C+P N I+ + +
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR-MVENGCQPDVVTYNSIVNGICRSGD 208
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A DL + + V + +Y+ ++ + C +G I A +LF +M +G+ V +Y
Sbjct: 209 T-SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++GLC+ + N LL+DM+++ VP+ +++ LL+ ++ KL+EA +L M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +P+I+ YNT++ G+C + R +A +L+ M N C P++V++ +L+ G C D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + + +G + L++GFC GK+ A + +E++ G P T+ +++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+C ++EK E+ ++ K
Sbjct: 448 LCDNGKLEKALEIFEDLQK 466
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY ++ S AL R M E N K + I++ L + A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC-RDGCIDAAIS 249
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK G+ + +YN ++R C G + L M R ++P+V ++ +L+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +L ++M+ +G P+ ++Y TL++ C + +L EA +L M C+PDIV
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ +++ G+C R D KV ++ G + N V+Y LV G C G +A++ Q M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C+ GK+++A + E+L K+ + I+ +C G ++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 428 E 428
E
Sbjct: 490 E 490
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + K G P+T ++N +++ G +S A L ++M E G PDV +Y ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+CR + A+DLL M + D +Y+T+++SLCR + A L M+ KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS------------------------------ 334
+V YN++V G C+ G+ D +L+DM S
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 335 -----NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
G PN+++Y TL+ G C Q A + LM+ SP +LIKG+C V
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+VD+ V + K G + T+ ++V C +++ E+ E+V
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY L+ Y N A M+ C P +++ + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR-VDDG 387
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ K G++ N +Y+I+++ FC +G I +A LF +M GV+PDV +Y IL+ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+++ ED+ + YTT++ +C+ K+ +A+ L C + KG P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y ++ G C++G +A +L M +G PN +Y TL+ G + K ++
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 366 LMISKGFSPHFS 377
M S GFS S
Sbjct: 568 EMKSCGFSADAS 579
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+ M+ +PLP +R + + + D K +G+ N +
Sbjct: 70 DDAIALFQEMIR--SRPLPSLVDFSRFFSAIARTKQF-NLVLDFCKQLELNGIAHNIYTL 126
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC AY++ K+ + G PD ++ L++GL + +V+ AV L++ M+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD ++Y +++N +CR A LL +M+ + D+ Y+T++ CR+G
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + ++M + G ++V+Y +LV GLC G ++ ++ M+S+ P+ + L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
F GK+ EA + +E++ G +P+ T+ ++ C + + +L+ +V+
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 177/379 (46%), Gaps = 13/379 (3%)
Query: 45 EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILK 104
E+ ++ + + I S CR + A+ S L KE+ + S TY L+
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAIS---LFKEM-----ETKGIKSSVVTYNSLVRG 272
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCK 162
L +A ++ D L+ + P++ T+ L+ ++ + A + ++ M+
Sbjct: 273 LCKAGKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +++ N L A ++ ++ P+ ++ +++ +C +
Sbjct: 331 PNIITYNTLMDGYCMQ-NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F + +RG++ + +Y IL+QG C+ ++ A +L ++M++ G +PD ++Y LL+ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
KL +A ++ ++ + IV Y T++ G C+ G+ DA + +P G PN++
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y ++ GLC +G A ++ M G +P+ + LI+ G + + ++EE+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 403 LKAGEAPHEDTWVMIVPQI 421
G + + M++ +
Sbjct: 570 KSCGFSADASSIKMVIDML 588
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 161/366 (43%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F+H T+L +I LGRA + IL+ + + L+ +I
Sbjct: 28 ALQFFRWVERSNLFQHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y + + ++K F+ M E GV
Sbjct: 88 DSYGKKGIVQESVKLFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+ + + G +A FNKM G+ P ++ +++ G +V A
Sbjct: 112 ERTIKSYDALFKVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANX 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y TL+N R KK+ EA + MK + P ++ Y T++ G+
Sbjct: 172 FFEDMKSRDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
R DA ++E+M G PN ++Y TL+ GLC+ A+ ++ M+ K +P
Sbjct: 232 SVDRVDDALSLMEEMKGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI G C G +D A VL+ +++ + +++ C E+ +K +L++
Sbjct: 292 SIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + LF KM E GV ++SY L + + R+ +
Sbjct: 73 KKGLEWDEDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A MLN+G P ++ ++ K+ A MK + PD++ YNT++
Sbjct: 133 MAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLI 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+ R + +A + +M P +++Y TL+ G D A M+ M G
Sbjct: 193 NGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGIK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT-WVMIVPQICAGEEMEKLGE 432
P+ L+ G CN K+ EA +L+E++ AP +++ ++ ++ C ++ +
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAAD 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E+Y
Sbjct: 313 VLKAMIRLSVP--TEAGHYGVLIENY 336
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 115/297 (38%), Gaps = 48/297 (16%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI R K + + +K + T +T LIK Y + D AL M
Sbjct: 187 TYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEM 246
Query: 157 LEFNCKP--------LP--------KQLNRILELLVTHRNYLRP---------------- 184
F KP LP + IL+ +V Y+ P
Sbjct: 247 KGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVD--KYIAPTDNSIFLKLISGQCKA 304
Query: 185 -----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES- 238
A D+ K+ + V Y +++ +C A L +K+ E+ ++ +S
Sbjct: 305 GNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQST 364
Query: 239 -------YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
Y +++ LC Q +A L+ ++ G V + + TL+ ++ A+
Sbjct: 365 LHMEPSAYNPMIEYLCDNGQTAKAETLVRQLMKLG-VQEPTALNTLIRGHSQEGSPDSAF 423
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
+LL M + + + Y+++V + ++ DA L+ M NG LP+ +R+++
Sbjct: 424 ELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRSVM 480
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 194/413 (46%), Gaps = 22/413 (5%)
Query: 54 NSKSPIGSPCRVQKLIAS-QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF- 111
NS S +P R++ ++ + D +L+ E F++ Q + TY I++ L + F
Sbjct: 149 NSMSTGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFK 208
Query: 112 ---SLIDDILITLKSEH-----------YPV---TPSLFTYLIKIYAESNLPDRALKTFR 154
S++ IL + +H Y + +P +F L K YA+ A+ F
Sbjct: 209 SAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFC 268
Query: 155 SMLEFNCKPLPKQLNRILELLVT-HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M ++ P + N + ++ R + A ++ ++ + PN + N++M AFC
Sbjct: 269 QMKDYGFLPRVESCNAYISASISLQRGDI--ALTFYREMQRYRISPNVYTLNMVMCAFCK 326
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + A +F +M G P + SY L+ G C K +N + L M G PD ++
Sbjct: 327 WGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVT 386
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+ TL+N CR KL EA K+ MK P+ + YNT++ G+ + G + ++ ++M
Sbjct: 387 FNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEML 446
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
NG ++++Y L+ GLC +G A ++ + + P+ S ALI G C +
Sbjct: 447 RNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSE 506
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
A + + ++++G P+ T+ M++ C E+ + EV+ E+ + I D+
Sbjct: 507 RAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDS 559
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL +R M + P LN ++ L A ++FK G P SYN
Sbjct: 296 DIALTFYREMQRYRISPNVYTLNMVM-CAFCKWGKLEKAIEVFKRMETMGFSPTITSYNT 354
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ +C G ++ L M + GV PD ++ L+ G CR +++ A + +M
Sbjct: 355 LIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND 414
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VP+T++Y TL+N + +L M G DI+ YN ++LG C EGR A
Sbjct: 415 VVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAA 474
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++++ +PN ++ L+ G C + + A + + MI G P++ LI F
Sbjct: 475 YLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTF 534
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
C D A V+ E+ + AP DT + ++C G
Sbjct: 535 CKNEDFDGAVEVVREMSERSIAPDSDT----LSELCRG 568
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 133/291 (45%), Gaps = 5/291 (1%)
Query: 116 DILITLKSE--HYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
DI +T E Y ++P+++T ++ + + ++A++ F+ M P N +
Sbjct: 296 DIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTL 355
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ ++ L L K+GV P+ ++N ++ FC G + A +F++M
Sbjct: 356 IAGYC-NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND 414
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V+P+ +Y L+ G + L ++ML G D L+Y L+ LC + + ++A
Sbjct: 415 VVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAA 474
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L+ + + P+ ++ ++ G C + A ++ + M +GC PN +++ L+
Sbjct: 475 YLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTF 534
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
C FD A + ++ M + +P L +G GK + A + +E+
Sbjct: 535 CKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 585
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
+R S + Y + ++ K+ L I + + E +P++ +Y LI Y L +
Sbjct: 308 YRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNS 367
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
+K M + +P N ++ L A +F + V+PNT +YN ++
Sbjct: 368 GMKLKILMEKNGVRPDDVTFNTLINGFC-RGGKLHEANKIFSEMKANDVVPNTITYNTLI 426
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ G+ + L ++M G+ D+ +Y L+ GLC + + +A L++++ + V
Sbjct: 427 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 486
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P++ +++ L+ C +K A++L M GC+P+ + ++ FC+ A +V
Sbjct: 487 PNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEV 546
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+ +M P+ + L GL G ++A K + M K P
Sbjct: 547 VREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMP 592
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R + T+ LI R + I +K+ V P+ TY LI Y++ +
Sbjct: 381 RPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND--VVPNTITYNTLINGYSQVGNSEMG 438
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ ML K N ++ L + A+ L K + ++PN+ +++ ++
Sbjct: 439 GRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAY-LVKELDRENLVPNSSTFSALIT 497
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C + A+ L+ M G P+ ++++L+ C+ + AV+++ +M + P
Sbjct: 498 GQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAP 557
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
D+ + + L L K A KL M++K P+
Sbjct: 558 DSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPE 593
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF L+KS + G PN ++ +++ FC N D A + +M ER + PD ++ L +
Sbjct: 508 AFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCR 567
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
GL + A+ L ++M K +P+ + +N
Sbjct: 568 GLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTIN 602
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 3/313 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P +TY I + + A M E +P N +++ N L A
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN-LEMA 315
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FD + G++P +YN+++ A + + A + +M E+G++PD +Y IL+ G
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR V +A L ++M++KG P ++YT+L+ L ++ ++++A L ++ KG PD
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPD 435
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ +N ++ G C G A +L++M +P+ V++ TL+ G C +G + A++ ++
Sbjct: 436 LIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M S+G P + LI G+ G + +A V +E+L G P T+ ++ +C E
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNE 555
Query: 426 EMEKLGEVLNEIV 438
E + ++L E++
Sbjct: 556 EGDHAEQLLKEMI 568
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 154/302 (50%), Gaps = 3/302 (0%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K + + P+ TY LI Y + A M+ P N ++ L
Sbjct: 286 KMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDC 345
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A + K + G++P++ +YNI++ +C G++ A+TL ++M +G+ P +Y
Sbjct: 346 K-MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTY 404
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ L ++ ++ +A DL E ++ KG PD + + L++ C + A+ +L M
Sbjct: 405 TSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQ 464
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
PD V +NT++ G CREG+ A +++E+M S G P+ +SY TL+ G +G
Sbjct: 465 MKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD 524
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M+S GF+P +ALI+G C + D A +L+E++ G P+++T++ ++
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Query: 420 QI 421
I
Sbjct: 585 GI 586
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ AF L G+ P +Y ++ G + A LF K+ +G+ PD+ +
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C ++RA +L++M VPD +++ TL+ CR+ K+ A +L+ MK +G
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD + YNT++ G+ + G DA +V ++M S G P L++Y L+ GLC D A+
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ ++ MISKG +P+ + +LI+G NV
Sbjct: 562 QLLKEMISKGITPNDNTYLSLIEGIGNV 589
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 133/259 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF+ F GV+P+ + N M+ F + A+ L+ +MF + V ++ I++
Sbjct: 140 AFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMIN 199
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC++ ++ +A + + M G P+ ++Y T+++ C + ++ A + MK +G P
Sbjct: 200 VLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKP 259
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D Y + + G C+EG+ +A +LE M G P V+Y TL+ G C++G ++A Y
Sbjct: 260 DSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYR 319
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ +G P S + LI K+DEA G+++E+ + G P T+ +++ C
Sbjct: 320 DKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRC 379
Query: 425 EEMEKLGEVLNEIVKVEIK 443
++K + +E++ I+
Sbjct: 380 GNVKKAFTLHDEMISKGIQ 398
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 36/345 (10%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
++ ++ +SN ++A + M K N ++ +L L+ A +
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCK-EGKLKKAKEFIGLMEAL 220
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +YN ++ +C G + A +F+ M RGV PD +Y + G+C++ ++ A
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKK------------------------------ 285
+LE M G P ++Y TL++ C K
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340
Query: 286 -----KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
K+ EA ++ M KG PD V YN ++ G+CR G A + ++M S G P
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
V+Y +L+ L +G A + ++ KG P + +ALI G C G +D A +L+
Sbjct: 401 RVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLK 460
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
E+ + P E T+ ++ C ++E E++ E+ IK D
Sbjct: 461 EMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPD 505
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKM-FERGVM--PDVESYRILMQGLCRKSQVNRA 255
PN+K +++ +G SI +FN++ RGV+ Y +L++ C + + A
Sbjct: 82 PNSKPSLQLLKETINSGVYSIR-EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDA 140
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL---LCRMKVKGCNPDIVHYNTV 312
+ + M KG +P + +L+ + + +A+ L + RM++K +V +N +
Sbjct: 141 FECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIK---SSVVTFNIM 197
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ C+EG+ A + + M + G PN+V+Y T++ G C +G + A+ LM +G
Sbjct: 198 INVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGV 257
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + I G C GK++EA G+LE++ + G P T+ ++ C +E +
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD 317
Query: 433 VLNEIVK 439
+++V+
Sbjct: 318 YRDKMVR 324
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 83/170 (48%)
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+ + C K+ +A++ MK KG P + N ++ F + R A + +M
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
++V++ ++ LC +G AK+++ LM + G P+ + +I G+C+ G+V+
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
A + + + G P T+ + +C ++E+ +L ++ ++ ++
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLR 293
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 171/387 (44%), Gaps = 35/387 (9%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+++FD + ++ LI+ R +D +L ++ + + + + T ++
Sbjct: 168 ARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIV 227
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP----------------LPKQLNRILELLV----- 176
+++ + + FR MLE P KQ +LE +V
Sbjct: 228 RVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLK 287
Query: 177 ----THRN---------YLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
TH + + AF LF K PN +Y +M+ +C G ++ A
Sbjct: 288 PNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEM 347
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
L +M E+G+ P+ +Y L+ G C++ N A +L+ M +GF P+ +Y L++ LC
Sbjct: 348 LLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLC 407
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+K K++EAYK+L +G D V Y ++ C++G A + M NGC P++
Sbjct: 408 KKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIH 467
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y TL+ C Q + ++K ++ P ++I G+C VGK A V E +
Sbjct: 468 TYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERM 527
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEK 429
++ G T+ ++ +C +E+
Sbjct: 528 VQNGCQADSITYGALISGLCKESRLEE 554
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 136/277 (49%), Gaps = 2/277 (0%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P+ + R + L A D+ HG+ ++ N ++RA G + A
Sbjct: 111 PMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARK 170
Query: 223 LFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+F+ M RG ++PD S+R L+ G CR ++ LL M +GF D + T ++
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+K + R+ +L RM G P++V+Y + G C+ A VLE+M + G PN+
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 342 VSYRTLVGGLCDQGMFDVA-KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
++ +L+ GLC G + A + +++L+ S + P+ +I G+C GK+ A +L
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+++ G AP+ +T+ ++ C E++N++
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKM 387
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 42/265 (15%)
Query: 222 TLFNKMFERGVMPDV-ESYRILMQGLCRKSQVNRAVDLLEDMLNKG--FVPDTLSYTTLL 278
T +RG +P E+ R ++ ++ A D++ +M + G F +T ++ +L
Sbjct: 99 TAATTFVDRGSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANW--VL 156
Query: 279 NSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG- 336
+ A K+ M +G PD + +++G CR+GR + +L M G
Sbjct: 157 RAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGF 216
Query: 337 CL----------------------------------PNLVSYRTLVGGLCDQGMFDVAKK 362
CL PN+V+Y + GLC + A
Sbjct: 217 CLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFY 276
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE-APHEDTWVMIVPQI 421
++ M++KG P+ +LI G C +G + A + +L+K+ P+ T+ +++
Sbjct: 277 VLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGY 336
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C ++ + +L +V+ + +T
Sbjct: 337 CKEGKLARAEMLLGRMVEQGLAPNT 361
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 34/379 (8%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V K++ SD +A + +A +P F H+N +I L F+L+ + L +
Sbjct: 92 PFVVNKVLRGLSDSGMAVRFYWWAESRPGFYHNNFAIAYIISLLFVDDNFALLLEFLGRV 151
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH--- 178
+S+ SL+ L+ YA + D ++TF M+ C+ NR + +++ +
Sbjct: 152 RSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCF 211
Query: 179 -------------------------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
N + +L K G P+ + NI
Sbjct: 212 DLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIY 271
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C + + A + KM +G PDV +Y ++ LC + + AV L E+M+ +G
Sbjct: 272 VHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGL 331
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++ L+ LC+ +K+ EA++L RM ++ YN ++ GF R G A K
Sbjct: 332 KPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYK 391
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ M NGC P++V+Y L+ C GM D A+ ++ M G +P + L+KG C
Sbjct: 392 TVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLC 451
Query: 388 NVGKVDEACGVLEELLKAG 406
++D+A + + ++ G
Sbjct: 452 KAHQLDKAFAFVSDHMEVG 470
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY L+ Y + D+A R M P N +L+ L L AF
Sbjct: 403 PDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQ-LDKAFA 461
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G + S NI++ AFC ++ A LF +M +G+ D +Y IL+ GL
Sbjct: 462 FVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLF 521
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
N A +L + MLN VP+ Y +L++LC+ + A K+ +M K +PD V
Sbjct: 522 GIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTV 581
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ + RA++A + ++M + G P+ +++R ++ GL D+G +A + + M
Sbjct: 582 TFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYM 641
Query: 368 ISKGFSPHFSVSHALI 383
+ G VS LI
Sbjct: 642 MENGIILDRDVSERLI 657
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 110/240 (45%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A+ ++G P+ +YNI++ +C G A L KM GV PD SY I
Sbjct: 386 IEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNI 445
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC+ Q+++A + D + G D +S L+++ CR KK+ A L M KG
Sbjct: 446 LLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKG 505
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G G + A ++ + M + +PN+ Y ++ LC G F A+
Sbjct: 506 IQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQ 565
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K M K SP + LI + EA + +E+ G P T+ I+ +
Sbjct: 566 KIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGL 625
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 152/388 (39%), Gaps = 40/388 (10%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F L++ ++ + +TP ++ I +SN + + M +F C P N
Sbjct: 211 FDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNI 270
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+ L H N L A + + G P+ +Y ++ C + S A L+ +M R
Sbjct: 271 YVHYLCGH-NRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRR 329
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN-------------------------- 264
G+ PDV + L+ GLC+ +V+ A +L ML
Sbjct: 330 GLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKA 389
Query: 265 ---------KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
G PD ++Y LLN C +A L+ +M++ G NPD YN ++ G
Sbjct: 390 YKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKG 449
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ + A + D G ++VS L+ C + A + M KG
Sbjct: 450 LCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQAD 509
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI G +G + A + +++L P+ + + +++ +C + ++
Sbjct: 510 AVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFW 569
Query: 436 EIVKVEIKGDTRIVEAGIGLEDYLIGKT 463
++ + E+ DT I Y +GK+
Sbjct: 570 QMTQKEVSPDTVTFNTLI----YWLGKS 593
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 7/279 (2%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR---NYLRPAFD 187
S++ LI + + ++A KT M C+P N +L+ H A +
Sbjct: 371 SIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYN----ILLNHYCSIGMTDKAEN 426
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + GV P+ SYNI+++ C + A+ + E G D+ S IL+ C
Sbjct: 427 LIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFC 486
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R +VN A++L ++M KG D ++Y L+N L A +L +M P++
Sbjct: 487 RAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVN 546
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C+ G A K+ M P+ V++ TL+ L A + M
Sbjct: 547 VYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEM 606
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+KG P +I G + GK A + E +++ G
Sbjct: 607 RTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENG 645
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 92/224 (41%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+GV YR+L+ G R + + ++ ++M+ G + Y + + +
Sbjct: 154 QGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDL 213
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
K KG Y+ + C+ R ++L DM GC P+ + V
Sbjct: 214 VEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVH 273
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC A + ++ M KG P ++ C+ + EA G+ EE+++ G P
Sbjct: 274 YLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKP 333
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++ +C +++++ E+ + ++ ++I+ + I A I
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALI 377
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 36/391 (9%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A L NKM + DV + ++ LC+ V+ A++L ++M KG P+ +
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ +DM
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC----- 387
P++ +Y +LV G C D AK+ + M+SK P + LIKGFC
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 388 ------------------------------NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ G D A V ++++ G P T+ ++
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +C ++EK EV + + K EIK D I
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 5/335 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K + + L+TY LI + + AL M++ +P L+ +
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L H + A L + G P+T ++ ++ + S A L ++M +RG
Sbjct: 162 LNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
P++ +Y +++ GLC++ + A++LL M D + + T+++SLC+ + + +A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M+ KG P++V Y++++ C GR DA ++L DM PNLV++ L+
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+G F A+K MI + P ++L+ GFC ++D+A + E ++ P
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E E+ E+ + GDT
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 5/336 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +F +I + D
Sbjct: 222 QPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F+ M +P + ++ L ++ + A L + + PN ++N +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMIEKKINPNLVTFNAL 336
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G A L++ M +R + PD+ +Y L+ G C ++++A + E M++K
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++Y TL+ C+ K++ + +L M +G D V Y T++ G +G +A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G P++++Y L+ GLC+ G + A + M + +I+G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
GKVD+ + L G P+ T+ ++ +C+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 4/339 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L K E + P++ TY LI A + M+E P N
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ V ++ A L+ K + P+ +YN ++ FC + + A +F M +
Sbjct: 336 LIDAFVKEGKFVE-AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PDV +Y L++G C+ +V +L +M ++G V DT++YTTL+ L A
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ +M G PDI+ Y+ ++ G C G+ A +V + M + ++ Y T++ G
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C G D + KG P+ + +I G C+ + EA +L+++ + G P+
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
T+ ++ + E++ E+ GD +
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L A LF K LP+ +N ++ A + +L KM ++ +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ CR+SQ++ A+ LL M+ G+ P ++ ++LLN C K++ +A L+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD + + T++ G +A +A +++ M GC PNLV+Y +V GLC +G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+A + M + + + +I C VD+A + +E+ G P+ T+ +
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI 442
+ +C+ ++L+++++ +I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKI 326
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
YR +++ +++ A+ L M+ +P + + LL+++ + KK L +M
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 298 KVKGCNPDIVH----YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ +IVH YN ++ FCR + A +L M G P++V+ +L+ G C
Sbjct: 112 Q----RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A + M+ G+ P LI G K EA +++ +++ G P+ T
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ ++V +C + + +LN++ +I+ D I
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+DLF S GV PN +YN M+ C + AY L KM E G +P+ +Y L++
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N+ H STY+ LI L +Y + I +++ VTP+ + +++
Sbjct: 108 QFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVR 167
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P + N ++ +++ H +L+ G
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMI-IMLMHEGQYGKVHELYNEMSTEGHC 226
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M E G+ P + Y +L+ + V+ A+
Sbjct: 227 FPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALS 286
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M ++ PD +YT L+ L + ++ EAY M+ +GC PD V N ++
Sbjct: 287 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLG 346
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ ++M + C+P++V+Y T++ L + + + + M G SP
Sbjct: 347 KAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS 406
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC ++++A +LEE+ + G P
Sbjct: 407 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 439
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 38/332 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+A ++ E + +I ++ D A+K F+ M
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEM 361
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I++ L ++ F+ + G+ P++ +Y+I++ FC
Sbjct: 362 GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 421
Query: 217 ISIAYTLFNKMFERGVMP-----------------------------------DVESYRI 241
+ A L +M E+G P Y +
Sbjct: 422 MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 481
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ L + +++ A+++ ++M G PD +Y L++ L R L EA + RM+ G
Sbjct: 482 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 541
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI YN ++ G + G A ++L +M + P++VSY T++G L GMF+ A
Sbjct: 542 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAA 601
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
K M+ M + GF ++++ +GKVD
Sbjct: 602 KLMEEMNTLGFEYDLITYSSILEA---IGKVD 630
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 11/337 (3%)
Query: 111 FSLIDDILITL----KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPL 164
F +DD+ L + H P +FTY LI+ ++ D A F M C+P
Sbjct: 275 FFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD 334
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTL 223
+N ++ L L A LF+ +P+ +YN +++A F S +
Sbjct: 335 TVVMNNMINFL-GKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSW 393
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F +M E G+ P +Y IL+ G C+ +++ +A+ LLE+M KGF P +Y +L+++L +
Sbjct: 394 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
K+ A +L +K + Y ++ + GR DA + ++M GC P++ +
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYA 513
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ GL GM D A M+ M G P + + ++ G G A +L +
Sbjct: 514 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 573
Query: 404 KAGEAPHEDTWVMIVPQIC-AG--EEMEKLGEVLNEI 437
++ P ++ ++ + AG EE KL E +N +
Sbjct: 574 QSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTL 610
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 13/256 (5%)
Query: 30 IFCYSSSSQESPSSPEQQQESSISNSKSP----IGSPCRVQKLIASQSDPLLAKEIFDYA 85
+F S + E PS E+ +ES IS S I C+ ++ + +L +E+
Sbjct: 380 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRM---EKAMMLLEEM---- 432
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+ F + Y LI LG+AK + L ++ LK + ++ +IK ++
Sbjct: 433 -DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 491
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ F M + C P N ++ L L A + +HG +P+ SYN
Sbjct: 492 LDDAINMFDEMNKLGCAPDVYAYNALMSGL-ARTGMLDEALSTMRRMQEHGCIPDINSYN 550
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ G A + + M + V PDV SY ++ L A L+E+M
Sbjct: 551 IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTL 610
Query: 266 GFVPDTLSYTTLLNSL 281
GF D ++Y+++L ++
Sbjct: 611 GFEYDLITYSSILEAI 626
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 150/291 (51%), Gaps = 3/291 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L TY +IK + + A+ + M + +P N I++ L R + A D
Sbjct: 187 PNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR-LVSEALD 245
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F GV P+ +Y+I+M C + A LFN+M +MPDV ++ IL+ LC
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +++ M+ KG P+ +Y +L+N C + K+ EA + M KGC P++V
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G+C+ R +A ++ ++M G +PN +Y TL+ GLC G A++ + M
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++G SP L+ C +G +D A + + + P+ T+ +++
Sbjct: 426 QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI ++ D A +++ +P + ++ L + R A + F
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFAR-AMEFFDEM 180
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN +YN +++ FC G ++A L KM + G PD+ Y ++ GLC+ V
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A+D+ ++ KG PD +Y+ L++ LC + EA L M PD+V +N +
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V C+EG +A +++ M G PN +Y +L+ G C Q A+ MI+KG
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGC 360
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEME 428
P+ + LI G+C ++DEA + +E+ G P+ + ++ +C AG E
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 136/253 (53%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + K G P+ +++ ++ CF + A F++M G P++ +Y +++
Sbjct: 138 AFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIK 197
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ + AV LL+ M G PD + Y T+++ LC+ + + EA + +K KG P
Sbjct: 198 GFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP 257
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ Y+ ++ G C + +A + +M S +P++V++ LV LC +GM A+ +
Sbjct: 258 DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGII 317
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
++MI KG P+++ ++L+ G+C KV EA V + ++ G P+ ++ +++ C
Sbjct: 318 KIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKA 377
Query: 425 EEMEKLGEVLNEI 437
+ +++ E+ +E+
Sbjct: 378 QRIDEARELFDEM 390
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 6/320 (1%)
Query: 104 KLGRAKY-FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
+L R + FS++ I I L E VT F+ LI + RA++ F M+ +
Sbjct: 131 RLQRVDFAFSVLGKI-IKLGFEPDAVT---FSSLINGLCFEDKFARAMEFFDEMVASGYQ 186
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N I++ A L K K G P+ YN ++ C + +S A
Sbjct: 187 PNLHTYNTIIKGFC-KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALD 245
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F+++ +GV PDV +Y ILM GLC Q A L +M++ +PD +++ L++ LC
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
++ L EA ++ M KG P+ YN+++ G+C + + +A V + M + GC+PN+V
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
SY L+ G C D A++ M +G P+ + LI G C G+ EA + +++
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425
Query: 403 LKAGEAPHEDTWVMIVPQIC 422
G +P T +++ +C
Sbjct: 426 QAQGCSPDLVTCTILLDSLC 445
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF ++P+ ++NI++ C G +S A + M E+GV P+ +Y LM G C
Sbjct: 281 LFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYC 340
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+++V A + + M+ KG +P+ +SY L+N C+ +++ EA +L M +G P+
Sbjct: 341 LQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTF 400
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+YNT++ G C+ GR +A ++ +DM + GC P+LV+ L+ LC G D A + + M
Sbjct: 401 NYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKV 392
P+ LI+ GK+
Sbjct: 461 QDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 5/260 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRALKTFRS 155
Y +I L + + S DI +K + V P +FTY I ++ S+ + A F
Sbjct: 227 YNTIIDGLCKDRLVSEALDIFSEIKGK--GVRPDVFTYSILMHGLCNSDQKEEASALFNE 284
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+ N P N +++ L L A + K + GV PN +YN +M +C
Sbjct: 285 MMSLNIMPDVVTFNILVDKLCKE-GMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQN 343
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A +F+ M +G MP+V SY IL+ G C+ +++ A +L ++M +G +P+T +Y
Sbjct: 344 KVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYN 403
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL++ LC+ + EA +L M+ +GC+PD+V ++ C+ G +A ++ M +
Sbjct: 404 TLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDS 463
Query: 336 GCLPNLVSYRTLVGGLCDQG 355
PNLV+Y L+ + G
Sbjct: 464 CLKPNLVTYDILIRAMYKSG 483
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV + IL+ R +V+ A +L ++ GF PD +++++L+N LC + K A +
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M G P++ YNT++ GFC+ G+ A +L+ M G P++V Y T++ GLC
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ A + KG P L+ G CN + +EA + E++ P T+
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297
Query: 415 VMIVPQIC 422
++V ++C
Sbjct: 298 NILVDKLC 305
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%)
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C +I A FN M + +P + + L+ L R + L + + D
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+ L+N R +++ A+ +L ++ G PD V +++++ G C E + A + ++
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M ++G PNL +Y T++ G C G VA ++ M G P + + +I G C
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
V EA + E+ G P T+ +++ +C ++ E+ + NE++ + I D
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%)
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
Q C + + A+ M++K +P + + LL++L R K L R+++
Sbjct: 57 QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D+ H+N ++ F R R A VL + G P+ V++ +L+ GLC + F A ++
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M++ G+ P+ + +IKGFC +GK A G+L+++ KAG P + I+ +C
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236
Query: 424 GEEMEKLGEVLNEI 437
+ + ++ +EI
Sbjct: 237 DRLVSEALDIFSEI 250
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ IL+ KL + S I+ + + V P+ TY L+ Y N A F
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEK--GVEPNYATYNSLMNGYCLQNKVFEARMVFD 353
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+M+ C P N ++ + + A +LF G++PNT +YN ++ C
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQR-IDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G A LF M +G PD+ + IL+ LC+ ++ A+ L M + P+ ++Y
Sbjct: 413 GRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTY 472
Query: 275 TTLLNSLCRKKKL 287
L+ ++ + K+
Sbjct: 473 DILIRAMYKSGKI 485
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 148 RALKTFRSML-EFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTK 202
A + F M E NC+P N + ++ H L AF L + + G P+T+
Sbjct: 224 EAFRVFEKMSKEENCRP-----NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 278
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y ++++A C G A + ++M + +P+V +Y IL+ LCR+ ++ A + M
Sbjct: 279 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 338
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
L G P +++ L+N C++ + A++LL M+ C P+I YN ++ G CR ++
Sbjct: 339 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 398
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +L + NG LP+ V+Y LV G C +G ++A M S G P AL
Sbjct: 399 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 458
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
I G C +G++++A G+L ++K G + E T+ ++ C
Sbjct: 459 IDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 498
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 72/456 (15%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A +F+ S++ N R ++ TY ILI L A + + + + +T LI
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP----------------LPKQLNRILELLVTH--- 178
K + + D+A+K M C P ++ N + ++ H
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 344
Query: 179 ---------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ AF L K PN ++YN +M C A+ L
Sbjct: 345 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 404
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++ + G++PD +Y IL+ G C++ Q+N A ++ M + G PD ++T L++ LC+
Sbjct: 405 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 464
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL----- 338
+L +A +L M KG + D V + ++ G C+ G+A D C + E+M N CL
Sbjct: 465 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 524
Query: 339 ------------------------------PNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
P++V++ L+ G C G ++ K ++ M
Sbjct: 525 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 584
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G SP+ +I G CN G+V+EA +L + G +P+ T+ ++V ++
Sbjct: 585 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 644
Query: 429 KLGEVLNEIVKVEIKGDTRIVEA---GIGLEDYLIG 461
+ ++++ +VK + ++ I A G L + IG
Sbjct: 645 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIG 680
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 11/273 (4%)
Query: 179 RNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R+ L AF +F K + + PN+ +Y+I++ C G + A+ L +M E+G P
Sbjct: 219 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 278
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L++ C ++A+ +L++M K VP+ +YT L++ LCR+ K+ EA + +M
Sbjct: 279 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 338
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P I+ +N ++ G+C+EG + A ++L M C PN+ +Y L+ GLC
Sbjct: 339 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC----- 393
Query: 358 DVAKKY-----MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
V+K Y ++ ++ G P + L+ GFC G+++ A + + AG P
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C +E+ +L +VK I D
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+A+ ++ +M G + YR ++ LC+ V A +L GF DT T+L+
Sbjct: 154 VAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLV 213
Query: 279 NSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ CR+ L EA+++ +M K + C P+ V Y+ ++ G C GR +A ++ ++M GC
Sbjct: 214 LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 273
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y L+ CD GM D A K + M +K P+ LI C GK++EA G
Sbjct: 274 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 333
Query: 398 VLEELLKAGEAPHEDTWVMIVPQIC 422
V ++LK G P T+ ++ C
Sbjct: 334 VFRKMLKHGLCPGIITFNALINGYC 358
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 21/323 (6%)
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN--CKPLPKQLNRILELLVT 177
TLKS +TP L +I + +SN + ++ F+ + + C L ++ ++L +LV+
Sbjct: 36 TLKSLASHMTPHLAGKIIGL--QSNNVELGVRFFKWVCRQSSYCYDLDGRI-QLLGVLVS 92
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
DLF A K VL + + NG + + L + M E G
Sbjct: 93 R--------DLFGVAQKAVVLLIQECEDSE------NGVVKLMGAL-DGMTELGFRLSYP 137
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ L + + A + M+N+GFV + Y T++N+LC+ ++ A C++
Sbjct: 138 CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKV 197
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGM 356
G D ++VL CR +A +V E M C PN V+Y L+ GLC+ G
Sbjct: 198 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 257
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A + Q M+ KG P LIK C++G D+A +L+E+ P+ T+ +
Sbjct: 258 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 317
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ ++C ++E+ V +++K
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLK 340
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 149/359 (41%), Gaps = 40/359 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LI L + + IL ++ + + FT LI + + F +M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513
Query: 157 LEFNCKPLPKQLNRILELLVTHRNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+E C N L+ L ++Y L A + K+G++P+ ++ I++ C G
Sbjct: 514 VENRCLTTAHTFNCFLDAL--GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 571
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ +++ + +M + G P+V +Y I++ GLC +V A +L M + G P+ +Y
Sbjct: 572 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 631
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI-----------D 324
L+ + + +L A++++ M GC P+ Y+ ++ GF AI D
Sbjct: 632 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 691
Query: 325 ACKVLEDMPSNGCLPNLVS-------------------------YRTLVGGLCDQGMFDV 359
A + + N CL + V Y LV GLC +G
Sbjct: 692 ARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIE 751
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + Q M+ G P ++S ++I+ +C K D ++ +L P ++ ++
Sbjct: 752 ADQLTQDMVKHGLFPDKAIS-SIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVI 809
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 12/301 (3%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRAL--KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y + PS+ T+ I I + AL K M + C P I+ L +
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
LF S GV PN +Y ++++A G + A+ + + M + G P+ Y L+
Sbjct: 611 AETILF-SMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669
Query: 244 QG--LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
G L + RA+ D+ + + L + + R + A K+ R ++K
Sbjct: 670 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKI--RDEIKK 727
Query: 302 CN-PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C P YN +V+G C+EGR I+A ++ +DM +G P+ + +++ C +D
Sbjct: 728 CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNC 786
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++M+L++ F P F+ +I G N G+V EA ++ +L++ E V + P
Sbjct: 787 LEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEE---VEVTPS 843
Query: 421 I 421
I
Sbjct: 844 I 844
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 142/279 (50%), Gaps = 10/279 (3%)
Query: 149 ALKTFRSML-EFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTKS 203
A + F M E NC+P N + ++ H L AF L + + G P+T++
Sbjct: 248 AFRVFEKMSKEENCRP-----NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 302
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y ++++A C G A + ++M + +P+V +Y IL+ LCR+ ++ A + ML
Sbjct: 303 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 362
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G P +++ L+N C++ + A++LL M+ C P+I YN ++ G CR ++
Sbjct: 363 KHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSY 422
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L + NG LP+ V+Y LV G C +G ++A M S G P ALI
Sbjct: 423 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 482
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G C +G++++A G+L ++K G + E T+ ++ C
Sbjct: 483 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 521
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 72/456 (15%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A +F+ S++ N R ++ TY ILI L A + + + + +T LI
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP----------------LPKQLNRILELLVTH--- 178
K + + D+A+K M C P ++ N + ++ H
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 367
Query: 179 ---------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ AF L K PN ++YN +M C A+ L
Sbjct: 368 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 427
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++ + G++PD +Y IL+ G C++ Q+N A ++ M + G PD ++T L++ LC+
Sbjct: 428 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 487
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL----- 338
+L +A +L M KG + D V + ++ G C+ G+A D C + E+M N CL
Sbjct: 488 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 547
Query: 339 ------------------------------PNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
P++V++ L+ G C G ++ K ++ M
Sbjct: 548 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G SP+ +I G CN G+V+EA +L + G +P+ T+ ++V ++
Sbjct: 608 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 667
Query: 429 KLGEVLNEIVKVEIKGDTRIVEA---GIGLEDYLIG 461
+ ++++ +VK + ++ I A G L + IG
Sbjct: 668 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIG 703
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 11/273 (4%)
Query: 179 RNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R+ L AF +F K + + PN+ +Y+I++ C G + A+ L +M E+G P
Sbjct: 242 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 301
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L++ C ++A+ +L++M K VP+ +YT L++ LCR+ K+ EA + +M
Sbjct: 302 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 361
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P I+ +N ++ G+C+EG + A ++L M C PN+ +Y L+ GLC
Sbjct: 362 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC----- 416
Query: 358 DVAKKY-----MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
V+K Y ++ ++ G P + L+ GFC G+++ A + + AG P
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C +E+ +L +VK I D
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+A+ ++ +M G + YR ++ LC+ V A +L GF DT T+L+
Sbjct: 177 VAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLV 236
Query: 279 NSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ CR+ L EA+++ +M K + C P+ V Y+ ++ G C GR +A ++ ++M GC
Sbjct: 237 LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 296
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y L+ CD GM D A K + M +K P+ LI C GK++EA G
Sbjct: 297 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 356
Query: 398 VLEELLKAGEAPHEDTWVMIVPQIC 422
V ++LK G P T+ ++ C
Sbjct: 357 VFRKMLKHGLCPGIITFNALINGYC 381
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 149/343 (43%), Gaps = 24/343 (6%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LI L + + IL ++ + + FT LI + + F +M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536
Query: 157 LEFNCKPLPKQLNRILELLVTHRNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+E C N L+ L ++Y L A + K+G++P+ ++ I++ C G
Sbjct: 537 VENRCLTTAHTFNCFLDAL--GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 594
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ +++ + +M + G P+V +Y I++ GLC +V A +L M + G P+ +Y
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 654
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI-----------D 324
L+ + + +L A++++ M GC P+ Y+ ++ GF AI D
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 714
Query: 325 ACKVLEDMPSNGCLPNLVS---------YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
A + + N CL N + Y LV GLC +G A + Q M+ G P
Sbjct: 715 ARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 774
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++S ++I+ +C K D ++ +L P ++ ++
Sbjct: 775 KAIS-SIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVI 816
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 21/323 (6%)
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN--CKPLPKQLNRILELLVT 177
TLKS +TP L +I + +SN + ++ F+ + + C L ++ ++L +LV+
Sbjct: 59 TLKSLASHMTPHLAGKIIGL--QSNNVELGVRFFKWVCRQSSYCYDLDGRI-QLLGVLVS 115
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
DLF A K VL + + NG + + L + M E G
Sbjct: 116 R--------DLFGVAQKAVVLLIQECEDSE------NGVVKLMGAL-DGMTELGFRLSYP 160
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ L + + A + M+N+GFV + Y T++N+LC+ ++ A C++
Sbjct: 161 CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKV 220
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGM 356
G D ++VL CR +A +V E M C PN V+Y L+ GLC+ G
Sbjct: 221 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 280
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A + Q M+ KG P LIK C++G D+A +L+E+ P+ T+ +
Sbjct: 281 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 340
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ ++C ++E+ V +++K
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLK 363
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 2/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LIK + + AL TF + + P N +L L + + A +LF
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE-DRVSEALNLFHQM 175
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN ++ +M C G I A L ++M E G+ P +Y ++ G+C+
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235
Query: 253 NRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+DLL M +P+ + Y+ +++SLC+ + +A L M+ KG PD+ YN+
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++GFC GR DA ++L++M P++V+Y L+ +G F A++ M+ +G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ ++I GFC ++D A + + G +P+ T+ ++ C + ++
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 432 EVLNEIVKVEIKGDT 446
E+L+E+ + + DT
Sbjct: 416 ELLHEMTETGLVADT 430
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P N ++ V + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE-A 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF--------------------- 224
+L+ G++PNT +Y+ M+ FC + A +F
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 225 --------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
++M E G++ D +Y L+ G +N A+DLL++M++ G PD
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G E
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
LI G+C G+VD+ + E+ + G + T++ ++
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 117/211 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ P+ +YN M+ FC +G S A L +M ER + PDV +Y L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y+++++ C++ +L A + M KGC+P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ +NT++ G+C R D ++L +M G + + +Y TL+ G G + A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
Q MIS G P L+ G C+ GK+ +A
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Query: 185 AFDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A DL + + ++PN Y+ ++ + C +G S A LF +M E+G+ PD+ +Y ++
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C + + A LL++ML + PD ++Y L+N+ ++ K EA +L M +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P+ + Y++++ GFC++ R A + M + GC PNL+++ TL+ G C D +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M G + + LI GF VG ++ A +L+E++ +G P T ++ +C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 140/275 (50%), Gaps = 6/275 (2%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSY 204
+ A+ F ML +PLP ++ +L+ RP L++ + + + S+
Sbjct: 61 EDAIDLFSDMLR--SRPLPSVVD-FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
I+++ FC + A + F K+ + G+ PDV ++ L+ GLC + +V+ A++L M
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
P+ +++TTL+N LCR+ ++ EA LL RM G P + Y T+V G C+ G +
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237
Query: 325 ACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L M + +PN+V Y ++ LC G A+ M KG P +++I
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
GFC+ G+ +A +L+E+L+ +P T+ ++
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL---- 182
+P+L T+ LI Y + D ++ M E N ++ H YL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI-----HGFYLVGDL 446
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RG 231
A DL + G+ P+ + + ++ C NG + A +F M + G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV++Y IL+ GL + + A +L E+M ++G VPDT++Y+++++ LC++ +L EA
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M K +P++V + T++ G+C+ GR D ++ +M G + N ++Y TL+ G
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G + A Q MIS G P ++ G + ++ A +LE+L
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + N D A F M C P N +++ + +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR-IDDG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ +T +YN ++ F GD++ A L +M G+ PD+ + L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD +Y L++ L + K EA +L
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ + M S PN+V++ TL+ G C
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + + EE+++ +L ++
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKL 677
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL DML +P + + L+ + R ++ L +M+ K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
DI + ++ FC + A + G P++V++ TL+ GLC + A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M P+ L+ G C G++ EA +L+ +++ G P + T+ IV +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 422 C 422
C
Sbjct: 230 C 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ L A +F S PN ++ ++ +C G + LF +M RG++ + +
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G + +N A+D+ ++M++ G PDT++ +L L K++L+ A +L +++
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Query: 299 V 299
+
Sbjct: 679 M 679
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 175/357 (49%), Gaps = 12/357 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN +T+ I I L +A + +D++ +K+ + +P++ TY LI + +
Sbjct: 197 QPNL----TTFNIFINGLCKAGKLNKAEDVIEDIKA--WGFSPNIVTYNTLIDGHCKKGS 250
Query: 146 PD---RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
RA + ML P N +++ N L A + F+ + G+ PN
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL-AAKNAFEEMQRQGLKPNIV 309
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ NG + A L++KM G+ P++ ++ L+ G C+K + A L +D+
Sbjct: 310 TYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ VP+ +++ T++++ C+ + E + L M +G P++ YN ++ G CR
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNV 429
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A K+L +M + ++V+Y L+GG C G A+K + M++ G P+ + L
Sbjct: 430 RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ G+C G + A V ++ K G+ + T+ +++ C ++E +LNE+++
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLE 546
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 153/332 (46%), Gaps = 5/332 (1%)
Query: 127 PVTPSLFTYLIKIYAESNLP-DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
P +L T ++ + +NL A + FR + ++ K N +L LV
Sbjct: 126 PCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQ 185
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ ++K K + PN ++NI + C G ++ A + + G P++ +Y L+ G
Sbjct: 186 Y-VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244
Query: 246 LCRKSQVN---RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
C+K RA +L++ML P+ +++ TL++ C+ + + A M+ +G
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL 304
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+IV YN+++ G G+ +A + + M G PN+V++ L+ G C + M A+K
Sbjct: 305 KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK 364
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + P+ + +I FC G ++E + +L G P+ T+ ++ +C
Sbjct: 365 LFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLC 424
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+ + ++LNE+ E+K D IG
Sbjct: 425 RNQNVRAAKKLLNEMENYELKADVVTYNILIG 456
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +I + ++ + + SML+ P N ++ L ++N +R A L
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQN-VRAAKKLLNEM 439
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ + + +YNI++ +C +G+ S A L +M GV P+ +Y LM G C + +
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ + M +G + ++Y L+ C+ KL +A +LL M KG NP+ Y+ V
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
Query: 313 VLGFCREG 320
L +G
Sbjct: 560 RLEMLEKG 567
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
STY LI L R + +L + E+Y + + TY LI + + P +A K
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEM--ENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
ML KP N +++ N L+ A + K G N +YN++++ FC
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGN-LKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
G + A L N+M E+G+ P+ +Y ++ +ML KGF+PD
Sbjct: 531 TGKLEDANRLLNEMLEKGLNPNRTTYDVVRL----------------EMLEKGFIPD 571
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 2/319 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + P T + T + ++ E + + + R M+E C+P N I+ + +
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR-MVENGCQPDVVTYNSIVNGICRSGD 208
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A DL + + V + +Y+ ++ + C +G I A +LF +M +G+ V +Y
Sbjct: 209 T-SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++GLC+ + N LL+DM+++ VP+ +++ LL+ ++ KL+EA +L M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +P+I+ YNT++ G+C + R +A +L+ M N C P++V++ +L+ G C D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + + +G + L++GFC GK+ A + +E++ G P T+ +++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+C ++EK E+ ++ K
Sbjct: 448 LCDNGKLEKALEIFEDLQK 466
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY ++ S AL R M E N K + I++ L + A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC-RDGCIDAAIS 249
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK G+ + +YN ++R C G + L M R ++P+V ++ +L+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +L ++M+ +G P+ ++Y TL++ C + +L EA +L M C+PDIV
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ +++ G+C R D KV ++ G + N V+Y LV G C G +A++ Q M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C+ GK+++A + E+L K+ + I+ +C G ++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 428 E 428
E
Sbjct: 490 E 490
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + K G P+T ++N +++ G +S A L ++M E G PDV +Y ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+CR + A+DLL M + D +Y+T+++SLCR + A L M+ KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS------------------------------ 334
+V YN++V G C+ G+ D +L+DM S
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 335 -----NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
G PN+++Y TL+ G C Q A + LM+ SP +LIKG+C V
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+VD+ V + K G + T+ ++V C +++ E+ E+V
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY L+ Y N A M+ C P +++ + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR-VDDG 387
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ K G++ N +Y+I+++ FC +G I +A LF +M GV+PDV +Y IL+ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+++ ED+ + YTT++ +C+ K+ +A+ L C + KG P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y ++ G C++G +A +L M +G PN +Y TL+ G + K ++
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 366 LMISKGFSPHFS 377
M S GFS S
Sbjct: 568 EMKSCGFSADAS 579
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+ M+ +PLP +R + + + D K +G+ N +
Sbjct: 70 DDAIALFQEMIR--SRPLPSLVDFSRFFSAIARTKQF-NLVLDFCKQLELNGIAHNIYTL 126
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC AY++ K+ + G PD ++ L++GL + +V+ AV L++ M+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD ++Y +++N +CR A LL +M+ + D+ Y+T++ CR+G
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + ++M + G ++V+Y +LV GLC G ++ ++ M+S+ P+ + L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
F GK+ EA + +E++ G +P+ T+ ++ C + + +L+ +V+
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 180/383 (46%), Gaps = 13/383 (3%)
Query: 45 EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILK 104
E+ ++ + + I S CR + A+ S L KE+ + S TY L+
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAIS---LFKEM-----ETKGIKSSVVTYNSLVRG 272
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCK 162
L +A ++ D L+ + P++ T+ L+ ++ + A + ++ M+
Sbjct: 273 LCKAGKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +++ N L A ++ ++ P+ ++ +++ +C +
Sbjct: 331 PNIITYNTLMDGYCMQ-NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F + +RG++ + +Y IL+QG C+ ++ A +L ++M++ G +PD ++Y LL+ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
KL +A ++ ++ + IV Y T++ G C+ G+ DA + +P G PN++
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y ++ GLC +G A ++ M G +P+ + LI+ G + + ++EE+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 403 LKAGEAPHEDTWVMIVPQICAGE 425
G + + M++ + +GE
Sbjct: 570 KSCGFSADASSIKMVIDMLLSGE 592
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 163/333 (48%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N++H STY+ LI L +Y + I ++S VTP + +I+
Sbjct: 108 QFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIR 167
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P + N ++ +L+ H +L+ G
Sbjct: 168 MLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLI-HEGQYEKVHELYNEMSNEGHC 226
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M E G+ P + Y +++ + V+ A+
Sbjct: 227 QPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALS 286
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M PD +YT L+ L + ++ EAY M+ +GC PD V N ++
Sbjct: 287 LFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLG 346
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR D K+ E+M + C+PN+V+Y T++ L + + + + M G SP
Sbjct: 347 KAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSP 406
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC ++++A +LEE+ + G P
Sbjct: 407 FTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPP 439
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 154/344 (44%), Gaps = 15/344 (4%)
Query: 108 AKYFSLIDDILITLKSEHYPVT-----------PSLFTY--LIKIYAESNLPDRALKTFR 154
AK +++I + L + H ++ P +FTY LI+ ++ D A +
Sbjct: 265 AKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCF 213
M CKP +N ++ L L LF+ +PN +YN +++A F
Sbjct: 325 EMQREGCKPDTVVMNNMINFL-GKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES 383
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+S ++ F +M G+ P +Y IL+ G C+ +++ +A+ LLE+M KGF P +
Sbjct: 384 KSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA 443
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +L+++L + K+ A +L +K + Y ++ + GR DA + ++M
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC PN+ +Y L+ GL M D A M+ M G P + + ++ G G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
A +L + + P ++ ++ + E+ E++ E+
Sbjct: 564 RAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 141/333 (42%), Gaps = 38/333 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+A ++ E + +I ++ D LK F M
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+C P N I++ L ++ + F F+ G+ P+ +Y+I++ FC
Sbjct: 362 GVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNR 421
Query: 217 ISIAYTLFNKMFERGVMP-----------------------------------DVESYRI 241
I A L +M E+G P Y +
Sbjct: 422 IEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 481
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ L + +++ A++L ++M G P+ +Y L++ L R L EA + +M+ G
Sbjct: 482 MIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHG 541
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI YN ++ G + G A ++L +M ++ P+ VSY T++ L GMF+ A
Sbjct: 542 CLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAA 601
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+ M+ M + GF ++++ +GKVD+
Sbjct: 602 ELMKEMNALGFEYDLITYSSILEA---IGKVDQ 631
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+ Y LI LG+AK + L ++ LK + ++ +IK ++ D A+ F
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M + C P N ++ L L A + +HG LP+ SYNI++ G
Sbjct: 502 MSKLGCTPNVYAYNALMSGL-ARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
A + M + PD SY ++ L A +L+++M GF D ++Y+
Sbjct: 561 GPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYS 620
Query: 276 TLLNSL 281
++L ++
Sbjct: 621 SILEAI 626
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 195/432 (45%), Gaps = 16/432 (3%)
Query: 19 AVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLA 78
+ F K + YSS + E S E SI K PI P ++ L+ S ++
Sbjct: 10 VIQFYSKPSWMQRSYSSGNAEFNISGEV---ISILAKKKPI-EPA-LEPLVPFLSKNIIT 64
Query: 79 KEIFDYASRQPNFRH-----------SNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
I D +RQ FR S ++ ++I L L L LKS
Sbjct: 65 SVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 124
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
V F LI YA+ + ++A+++F M EF+C+P N IL +++ + AF
Sbjct: 125 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFA 184
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ K PN ++ I+M G S A +F+ M RG+ P+ +Y IL+ GLC
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ + A L +M G PD++++ LL+ C+ ++ EA++LL + G +
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G R R A ++ +M P+++ Y L+ GL G + A K + M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
SKG SP +A+IK C G ++E + E+ + P T +++ +C +
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 428 EKLGEVLNEIVK 439
+ E+ EI K
Sbjct: 425 REAEEIFTEIEK 436
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 13/256 (5%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A + + +ML+ N KP L IL ++ + A L S G+ P+T YN +
Sbjct: 321 QAFELYANMLKKNIKP-DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++A C G + +L +M E PD ++ IL+ +CR V A ++ ++ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV--------KGCNPDIVHYNTVVLGFCRE 319
P ++ L++ LC+ +L+EA LL +M+V + + ++T+V
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV----ES 495
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + A + L G P++VSY L+ G C G D A K + ++ KG SP
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 380 HALIKGFCNVGKVDEA 395
+ LI G VG+ +EA
Sbjct: 556 NTLINGLHRVGREEEA 571
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR- 254
GV ++ + +++ A+ G A F +M E PDV +Y ++++ + R+
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A + +ML P+ ++ L++ L +K + +A K+ M +G +P+ V Y ++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ G A DA K+ +M ++G P+ V++ L+ G C G A + ++L GF
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+LI G + +A + +LK P + +++ + ++E ++L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 435 NEIVKVEIKGDTRIVEAGI 453
+ + I DT A I
Sbjct: 362 SSMPSKGISPDTYCYNAVI 380
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
++ TF ++++ CK + R LL+ RPA + +H +S++ M+
Sbjct: 442 SVATFNALIDGLCKSGELKEAR---LLLHKMEVGRPASLFLRLSH-----SGNRSFDTMV 493
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ G I AY + G PD+ SY +L+ G CR ++ A+ LL + KG
Sbjct: 494 ES----GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLS 549
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLL 294
PD+++Y TL+N L R + EA+KL
Sbjct: 550 PDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 116/308 (37%), Gaps = 61/308 (19%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
NR + +V + L+ DL A G P+ SYN+++ FC GDI A L N +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADT-GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+G+ PD +Y L+ GL R + A L F Y +L+ CRK+K+
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVL 602
Query: 289 EAYKLLCR-MKVKGCNPD---------------------------------IVHYNTVVL 314
A+ L + +K C D + Y ++
Sbjct: 603 VAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLI 662
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ GR +A V + L S L+ GLC + D A + + F
Sbjct: 663 GLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFK- 721
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
L+ CN +L LL++ E + IV Q+ ME+ G +
Sbjct: 722 -------LMPRVCNY--------LLSSLLESTEK------MEIVSQLT--NRMERAGYNV 758
Query: 435 NEIVKVEI 442
+ +++ EI
Sbjct: 759 DSMLRFEI 766
>gi|356555650|ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Glycine max]
Length = 388
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 179/376 (47%), Gaps = 15/376 (3%)
Query: 54 NSKSPIGSPCRVQK---LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
NS +P+ S + + L+ S+++P +I A+ P+ + + + KL A +
Sbjct: 19 NSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAALTPDSHIDRRAFSLAVSKLAAAHH 78
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP---KQ 167
F+ I L LK+ ++ I +Y ++N+ D A++TF L P P K
Sbjct: 79 FAGIRTFLDDLKTRPDLRNEKFLSHAIVLYGQANMLDHAIRTFTEDL-----PSPRSVKT 133
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN +L + +NY + + + PN +YN +++AF +G S Y++ +M
Sbjct: 134 LNSLLFAALLAKNYKELTRIYLEFPKTYSIQPNLDTYNTVIKAFAESGSTSSVYSVLAEM 193
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ + P+V + + G R+ + + +L+ M P +Y + SLC+ K+
Sbjct: 194 DKNNIAPNVTTLNNSLSGFYREKKFDDVGKVLKLMEKYSVFPSISTYNVRIQSLCKLKRS 253
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
EA LL M G P+ V Y ++ GFC+EG +A ++ DM G LP+ Y TL
Sbjct: 254 SEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFRDMKRRGYLPDGECYFTL 313
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V LC G F+ A + + + KG+ P+F+ +L+ G KVDEA V+++ +K
Sbjct: 314 VHFLCCGGEFEAALEVAKECMGKGWVPNFTTMKSLVNGLAGALKVDEAKEVIKQ-IKEKF 372
Query: 408 APHEDTWVMI---VPQ 420
A D W I +PQ
Sbjct: 373 AESGDKWDEIEAGLPQ 388
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ AL F M + P +++ L + + A L ++PN ++N+
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRW-KEASALLNEMTSLNIMPNVVTFNV 190
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC G + A + M E GV PDV +Y LM G ++V A L + M+ KG
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD SY+ L+N C+ K++ EA +L M +G P+ V YNT++ G C+ GR +A
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQ 310
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ ++M +NG LPNL +Y L+ G C QG A + + M S P+ + + L+
Sbjct: 311 DLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAM 370
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
C G + +A + EL G P+ + I+ +C
Sbjct: 371 CKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC 406
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 5/324 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFR 154
TY LI L + + + DI +K++ ++P++FTY I N A
Sbjct: 117 TYSTLIHSLCKYRRVNEALDIFSYMKAKD--ISPTIFTYTSLIQGLCNFSRWKEASALLN 174
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M N P N +++ L A + K+ + GV P+ +YN +M +
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVL-AAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
++ A LF+ M +G PDV SY IL+ G C+ +++ A L +M+++G P+ +SY
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL++ LC+ +LREA L M G P++ Y ++ GFC++G A ++ M S
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
PNLV Y LV +C G A++ + G P+ + +I G C G +DE
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413
Query: 395 ACGVLEELLKAGEAPHEDTWVMIV 418
A + G P E ++ +I+
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVII 437
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + +A++ F M+ C+P I+ L A LFK
Sbjct: 48 FTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAA-GLFKKM 106
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G N +Y+ ++ + C ++ A +F+ M + + P + +Y L+QGLC S+
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRW 166
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A LL +M + +P+ +++ L+++ C++ K+ A +L M G PD+V YN++
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+ ++A K+ + M + GC P++ SY L+ G C D AK+ MI +G
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+P+ + LI G C +G++ EA + + + G P+ T+ +++ C
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 13/358 (3%)
Query: 97 TYLILILKLGRAKYFS----LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
T+ LI LG+ F+ L DD++ P +TY I + + AL
Sbjct: 47 TFTTLINGLGKVGKFAQAVELFDDMVAR------GCQPDDYTYTTIINGLCKIGETALAA 100
Query: 153 --FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F+ M E C+ + ++ L +R + A D+F + P +Y +++
Sbjct: 101 GLFKKMEEAGCQLNVVTYSTLIHSLCKYRR-VNEALDIFSYMKAKDISPTIFTYTSLIQG 159
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A L N+M +MP+V ++ +L+ C++ +V A +L+ M G PD
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y +L+ ++ EA KL M KGC PD+ Y+ ++ G+C+ R +A ++
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G PN VSY TL+ GLC G A+ + M + G P+ L+ GFC G
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +A + + P+ + ++V +C ++ E+ +E+ + ++ + +I
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 115/219 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PNT + NI++ FC + + +++ K + G+ P + ++ L+ GL + + +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
V+L +DM+ +G PD +YTT++N LC+ + A L +M+ GC ++V Y+T++
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ R +A + M + P + +Y +L+ GLC+ + A + M S P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ L+ FC GKV A GVL+ + + G P T+
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTY 223
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 125/254 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F + K G+ P ++ ++ G + A LF+ M RG PD +Y ++
Sbjct: 29 GFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIIN 88
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + A L + M G + ++Y+TL++SLC+ +++ EA + MK K +P
Sbjct: 89 GLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISP 148
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
I Y +++ G C R +A +L +M S +PN+V++ LV C +G A+ +
Sbjct: 149 TIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVL 208
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M G P ++L+ G+ +V EA + + ++ G P ++ +++ C
Sbjct: 209 KTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKA 268
Query: 425 EEMEKLGEVLNEIV 438
+ +++ ++ NE++
Sbjct: 269 KRIDEAKQLFNEMI 282
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F+Y LI Y ++ D A + F M+ P N ++ L LR A D
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC-QLGRLREAQD 311
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK+ H +G LPN +Y I++ FC G + A+ LF M + P++ Y IL+ +C
Sbjct: 312 LFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMC 371
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A +L ++ G P+ YTT++N LC++ L EA + M+ GC PD
Sbjct: 372 KSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEF 431
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNG 336
YN ++ GF + A ++ +M G
Sbjct: 432 SYNVIIRGFLQHKDESRAVHLIGEMRDRG 460
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY +Y S + A K F M+ CKP + ++ + + A
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKR-IDEA 274
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF G PN SYN ++ C G + A LF M G +P++ +Y IL+ G
Sbjct: 275 KQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDG 334
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C++ + +A L M + P+ + Y L+N++C+ L++A +L + V G P+
Sbjct: 335 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPN 394
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ Y T++ G C+EG +A + +M +GC P+ SY ++ G
Sbjct: 395 VQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P+ + IL+ C+ +V+ +L + G P +++TTL+N L + K +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M +GC PD Y T++ G C+ G A + + M GC N+V+Y TL+
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LC + A M +K SP +LI+G CN + EA +L E+ P+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++V C ++ VL + ++ ++ D
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L+TY I + + + +A + FR+M KP N ++ + N L+ A +
Sbjct: 323 PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN-LKDARE 381
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ PN + Y ++ C G + A F M + G PD SY ++++G
Sbjct: 382 LFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFL 441
Query: 248 RKSQVNRAVDLLEDMLNKGFVPD 270
+ +RAV L+ +M ++GF+ D
Sbjct: 442 QHKDESRAVHLIGEMRDRGFITD 464
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M++ G +P+ N ++ FC+ R VL G P +V++ TL+ GL G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
F A + M+++G P +I G C +G+ A G+ +++ +AG + T+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 417 IVPQIC 422
++ +C
Sbjct: 121 LIHSLC 126
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 158/328 (48%), Gaps = 19/328 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI ++++ + +A M+ C+P ++ + + + A
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK-VSVA 578
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE-------- 237
+LF+ G PN +Y ++ +C +G+I A ++ +M +PDV+
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638
Query: 238 --------SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+Y L+ GLC+ +V A DLLE M G P+T+ Y L++ C+ KL E
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDE 698
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +M +G NP++ Y++++ ++ R KVL M N C PN+V Y ++
Sbjct: 699 AQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMID 758
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GL D A K M +M KG P+ A+I GF GKVD+ + E+ G AP
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ T+ +++ CA +++ +L E+
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 66/436 (15%)
Query: 66 QKLIASQSDPLLAKEIFDYASRQ------PNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
K+I+ + +E D+ +R PN + TY IL+ K IL
Sbjct: 312 NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ----TYRILLCGCLNKKQLGRCKRILS 367
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP---------------- 163
+ +E + ++F L+ Y +S+ A K + M + CKP
Sbjct: 368 MMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGG 427
Query: 164 -LP---------KQLNRILE--LLVTHRNYLRPA-----FDLFKSAHK-------HGVLP 199
LP K N +L ++ N + A F F+ A+K +G +P
Sbjct: 428 ELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVP 487
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+T +Y+ ++ C + A+ LF +M GV+PDV +Y IL+ + + +A + L
Sbjct: 488 DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++M+ G P ++YTTL+++ + KK+ A +L M KGC P+++ Y ++ G+C+
Sbjct: 548 DEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607
Query: 320 GRAIDACKVLEDMPSNGCLP----------------NLVSYRTLVGGLCDQGMFDVAKKY 363
G AC++ M + +P N+V+Y LV GLC A+
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ M G P+ V ALI GFC K+DEA V ++++ G P+ T+ ++ ++
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFK 727
Query: 424 GEEMEKLGEVLNEIVK 439
+ ++ + +VL+++++
Sbjct: 728 DKRLDLVLKVLSKMLE 743
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A DL ++ G PNT Y+ ++ FC + A +F+KM ERG P+V +Y
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSS 720
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ L + +++ + +L ML P+ + YT +++ L + K EAYKL+ M+ KG
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P++V Y ++ GF + G+ ++ +M S GC PN V+Y L+ C G D A
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + H S +I+G+ + + G+LEE+ K G AP + +++
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNF 898
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
+E E+ E++ +
Sbjct: 899 VKAGRLEVALELHKEVISASM 919
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 175/419 (41%), Gaps = 43/419 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V ++++ P L + F +A RQ + H+ + Y+ L+ R Y + ++ L
Sbjct: 137 NPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLRE 196
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV---- 176
++ + V L LI+ + L + AL+ + +F KP N ++++ +
Sbjct: 197 IRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADK 256
Query: 177 ------THRNY------------------------LRPAFDLFKSAHKHGVLPNTKSYNI 206
HR R A L + K +PNT YN
Sbjct: 257 LDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNK 313
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ C A N+M +P+V++YRIL+ G K Q+ R +L M+ +G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID-- 324
P + +L+++ C+ AYKLL +M+ C P V YN ++ C G
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 325 ----ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A K +M S G + N V+ + LC G F+ A K + M+ GF P S
Sbjct: 434 TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYS 493
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I CN +V+ A + +E+ G P T+ +++ +++ L+E+V+
Sbjct: 494 EVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 159/369 (43%), Gaps = 11/369 (2%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ +F + Y +I L A +F D L ++S P++ TY I + N
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRST--SCIPNVQTYRILLCGCLNKK 357
Query: 147 D--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
R + M+ C P N ++ ++ A+ L K K P Y
Sbjct: 358 QLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF-SYAYKLLKKMEKCECKPGYVVY 416
Query: 205 NIMMRAFCFNGDI------SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
NI++ + C G++ +A +N+M G + + + + LC + +A +
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ +M+ GFVPDT +Y+ ++ LC ++ A+ L MK G PD+ Y ++ F +
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G A L++M +GC P +V+Y TL+ VA + +LMI+KG P+
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
ALI G+C G +++AC + + + P D + I + + G +++ +
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656
Query: 439 KVEIKGDTR 447
K D R
Sbjct: 657 KAHKVKDAR 665
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 5/348 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A D+L T+ + ++ LI + ++ D A + F M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E P + +++ L + L + ++ PN Y M+
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKR-LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
AY L M E+G P+V +Y ++ G + +V++ ++L +M +KG P+ ++YT
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N C L EAY LL MK + Y V+ G+ RE I + +LE++ NG
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE--FILSLGLLEEVEKNG 883
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS--PHFSVSHALIKGFCNVGKVDE 394
P ++ Y+ L+ G +VA + + +IS S ++ +LI F K+D
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDH 943
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
A + ++++ G P T+V ++ + E+ ++ + + +++I
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 3/203 (1%)
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+L++ CR N A++ L + + G+ P ++Y L+ R KL A + M
Sbjct: 211 VLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSEL 270
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G + D C+ G+ +A ++E +PN + Y ++ GLC+ F+ A
Sbjct: 271 GLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEA 327
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ M S P+ L+ G N ++ +L ++ G P + +V
Sbjct: 328 MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387
Query: 421 ICAGEEMEKLGEVLNEIVKVEIK 443
C ++ ++L ++ K E K
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECK 410
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 135/247 (54%), Gaps = 1/247 (0%)
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ K G+ P+ +YN ++R FC GD+ A NKM +GV P VE+Y IL+ G RK
Sbjct: 787 AMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKY 846
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ ++ DLL++M + G +P+ +SY TL+N LC+ KL EA + M+ +G +P++ YN
Sbjct: 847 EFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYN 906
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G C +G+ DA + E+M G NLV+Y TL+ GL G A+ + + K
Sbjct: 907 MLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRK 966
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P ++LI G+ G V + EE+ +G P T+ +++ +C E +E
Sbjct: 967 GLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELT 1025
Query: 431 GEVLNEI 437
++ E+
Sbjct: 1026 KKIFGEM 1032
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 38/354 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV----------- 176
PSL TY LI Y + P+++ K M N +P N +L+ L
Sbjct: 620 PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679
Query: 177 -----------------------THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ + A ++++A G+ N + +I++ A C
Sbjct: 680 LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G I A + + +G++P+ Y ++ G RK + A ++ M +G PD L+
Sbjct: 740 EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC-KVLEDM 332
Y L+ + C + A + + +MK+KG +P + YN ++ G+ R+ D C +L++M
Sbjct: 800 YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRK-YEFDKCFDLLKEM 858
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
NG +PN+VSY TL+ LC A+ + M +G SP+ + + LI G C+ GK+
Sbjct: 859 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++A EE+ K G + T+ ++ + ++ + ++L EI + +K D
Sbjct: 919 EDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDV 972
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L +L+ + A DLF + G+ P++ S +++ + +F + E
Sbjct: 487 LLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 546
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
P Y +Q + S V + ++L M + P Y L++ LC+ +++++A
Sbjct: 547 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDA 606
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+L M + P ++ YNT++ G+C++G + KV E M ++ P+L+++ TL+ G
Sbjct: 607 EQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKG 666
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
L GM + A+ + M +GF P L G+ + K D A GV E + +G +
Sbjct: 667 LFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMN 726
Query: 411 EDTWVMIVPQICAGEEMEKLGEVL 434
T +++ +C ++EK E+L
Sbjct: 727 AYTCSILLNALCKEGQIEKAEEIL 750
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 1/328 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ N S T+ L+ L +A +++L +K + + F+ L Y+ ++
Sbjct: 649 KADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKA 708
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL + + ++ K + +L L + A ++ G++PN YN
Sbjct: 709 DAALGVYETAVDSGLKMNAYTCSILLNALCKE-GQIEKAEEILGREMAKGLVPNEVLYNT 767
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ + GD+ A + M ++G+ PD +Y L++ C + A + M KG
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P +Y L+ RK + + + LL M+ G P++V Y T++ C+ + ++A
Sbjct: 828 VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 887
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
V DM G PN+ Y L+ G C +G + A ++ + M KG + + LI G
Sbjct: 888 IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGL 947
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
GK+ EA +L E+ + G P T+
Sbjct: 948 SMNGKLAEAEDMLLEISRKGLKPDVFTY 975
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 186/433 (42%), Gaps = 76/433 (17%)
Query: 68 LIASQSDPLLA-KEIFD-YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
L+ S S P + KE+F ++ P+ +H S YL+L + L +K S D+ L++E
Sbjct: 454 LLRSDSAPFTSPKELFSAFSLSSPSLKHDFS-YLLLSVLLNESKMISEAADLFFALRNEG 512
Query: 126 -YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+P + SL T L+ ++ + F ++LE + +P + ++ V + +
Sbjct: 513 IFPSSDSL-TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD-VGK 570
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+LF + P YN+++ C + A LF++M R ++P + +Y L+
Sbjct: 571 GLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLID 630
Query: 245 GLCRKSQ-----------------------------------VNRAVDLLEDMLNKGFVP 269
G C+ V A ++L +M ++GFVP
Sbjct: 631 GYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVP 690
Query: 270 DTLSY-----------------------------------TTLLNSLCRKKKLREAYKLL 294
D ++ + LLN+LC++ ++ +A ++L
Sbjct: 691 DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
R KG P+ V YNT++ G+ R+G + A ++ M G P+ ++Y L+ C+
Sbjct: 751 GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G + A++ + M KG SP + LI G+ + D+ +L+E+ G P+ ++
Sbjct: 811 GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870
Query: 415 VMIVPQICAGEEM 427
++ +C G ++
Sbjct: 871 GTLINCLCKGSKL 883
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 33/269 (12%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL K +G +PN SY ++ C + A + M +RGV P+V Y +L+ G
Sbjct: 852 FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C K ++ A E+M KG + ++Y TL++ L KL EA +L + KG PD
Sbjct: 912 CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ----------- 354
+ YN+++ G+ G + E+M ++G P L +Y L+ LC +
Sbjct: 972 VFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFG 1030
Query: 355 ---------------------GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G D A + MI K + ++LI G VGK+
Sbjct: 1031 EMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 1090
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQIC 422
E +++E+ P DT+ +IV C
Sbjct: 1091 EVRSLIDEMKAREMEPEADTYDIIVKGHC 1119
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 19/336 (5%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
S TY ILI GR F D+L + E P++ +Y LI + + A
Sbjct: 831 SVETYNILIGGYGRKYEFDKCFDLLKEM--EDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
R M + P + N +++ + + + AF + K G+ N +YN ++
Sbjct: 889 VKRDMEDRGVSPNVRIYNMLIDGCCS-KGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGL 947
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
NG ++ A + ++ +G+ PDV +Y L+ G V R + L E+M G P T
Sbjct: 948 SMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP-T 1006
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
L LL SLC K+ + K+ M ++ PD++ YN V+ + G A + +
Sbjct: 1007 LKTYHLLISLCTKEGIELTKKIFGEMSLQ---PDLLVYNGVLHCYAVHGDMDKAFNLQKQ 1063
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M + +Y +L+ G G + + M ++ P ++KG C +
Sbjct: 1064 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKD 1123
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
A E+ + G ++ +C G+E+
Sbjct: 1124 YMGAYVWYREMQEKG----------LLLDVCIGDEL 1149
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 11/239 (4%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI L + +D+L+ + + + P +FTY LI Y + R + +
Sbjct: 939 TYNTLIDGLSMNGKLAEAEDMLLEISRKG--LKPDVFTYNSLISGYRFAGNVQRCIALYE 996
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL-PNTKSYNIMMRAFCF 213
M KP K + ++ L + +L K L P+ YN ++ +
Sbjct: 997 EMKTSGIKPTLKTYHLLISLCT------KEGIELTKKIFGEMSLQPDLLVYNGVLHCYAV 1050
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+GD+ A+ L +M E+ + D +Y L+ G + ++ L+++M + P+ +
Sbjct: 1051 HGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADT 1110
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
Y ++ C K AY M+ KG D+ + +V G E R+ +A V+ +M
Sbjct: 1111 YDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F SM+ KP +L T + L DL +G+ PN +NI A+
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYAT-KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G I A +FNKM ++G+ PD SY L+ LC+ +V+ A M+N+G PD +
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIV 449
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+++L+ LC K + +L M G +P+IV +NT++ C+EGR ++ ++++ +
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI 509
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P+++SY TL+ G C G D A K ++ M+S G P + L+ G+C G++
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
D A ++L G P T+ I+ + + + E+ ++ K D
Sbjct: 570 DSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWD 622
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 123/238 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+F + G+ P+ SY ++ A C G + A FN+M GV PD+ + L+
Sbjct: 397 AMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVY 456
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + +L +MLN G P+ + + T+L +LC++ ++ E +L+ ++ G P
Sbjct: 457 GLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YNT++ G C G +A K+LE M S G P+ SY TL+ G C G D A +
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHF 576
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+S G +P + ++ G + EA + ++ +G T+ +I+ +C
Sbjct: 577 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLC 634
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 4/230 (1%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V PN +Y+I++ FC G + + F + + G D L+ GLC +V A+
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 257 D-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM---KVKGCNPDIVHYNTV 312
D LL+ M G +PDT+SY LL LC +K+ EA +LL M +V C P++V Y+TV
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GF EG+ + +M G P++V+Y T++ GLC +FD A+ Q MI G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P+ + LI G+ ++GK E +LEE+ G P+ T+ ++ +C
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLC 319
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P++ SYN ++ +C G I AY+ F KM G+ P V +Y ++ GL + + + A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M+N G D +Y +LN LC+ + EA K+ + KG +I+ +N ++
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ GR DA + +P+NG + N+V+YR +V L ++G + M G +P+
Sbjct: 668 LLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ +AL++ + G + A L +L + + T M++ + E
Sbjct: 728 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDE 777
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 36/331 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP----------------LPKQLN 169
+ P + TY +I ++ L DRA F+ M++ KP K++
Sbjct: 234 IPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVV 293
Query: 170 RILELLVTHR------------NYL------RPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
R+LE + NYL R A F S G+ P+ +Y IM+ +
Sbjct: 294 RMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGY 353
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
G +S + L N M G+ P+ + I + +++A+D+ M +G PD
Sbjct: 354 ATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDA 413
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SY L+++LC+ ++ +A +M +G PDIV ++++V G C + ++ +
Sbjct: 414 VSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFE 473
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M + G PN+V + T++ LC +G ++ + + G P + LI G C G
Sbjct: 474 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+DEA +LE ++ G P ++ ++ C
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 4/313 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLE---FNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
+ L+K + AL+ M + ++C P + ++ T +P ++LF
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKP-YNLF 226
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
G+ P+ +Y ++ C A +F +M + GV P++++Y L+ G
Sbjct: 227 LEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSI 286
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ V +LE+M G P+ +Y +LLN LC+ + REA M KG P + Y
Sbjct: 287 GKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTY 346
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
++ G+ +G + +L M +NG PN + G+ D A M
Sbjct: 347 GIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQ 406
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+G SP ALI C +G+VD+A +++ G P + +V +C ++ EK
Sbjct: 407 QGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEK 466
Query: 430 LGEVLNEIVKVEI 442
+ E+ E++ V I
Sbjct: 467 VEELFFEMLNVGI 479
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 10/290 (3%)
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL---PNTKSYNIMMR 209
+ M E C P N +L+ L + A +L V PN SY+ ++
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKR-AEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
F G + Y LF +M +RG+ PDV +Y ++ GLC+ +RA + + M++ G P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ +Y L++ K +E ++L M G P+ Y +++ C+ GR +A
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ M G P++ +Y ++ G +G + LM++ G SP+ + + +
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G +D+A + ++ + G +P ++ ++ +C KLG V + VK
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALC------KLGRVDDAEVK 435
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 147/315 (46%), Gaps = 5/315 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+ TY LI + + F +L+ + +N++L L +
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM---PDVESYRIL 242
L + + G +P+T SYNI+++ C A L + M + V P+V SY +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G + QV++ +L +M+++G PD ++YTT+++ LC+ + A + +M G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+I YN ++ G+ G+ + ++LE+M + G PN +Y +L+ LC G A+
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ MI KG P + ++ G+ G + E +L ++ G +P+ + +
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389
Query: 423 AGEEMEKLGEVLNEI 437
++K ++ N++
Sbjct: 390 KCGIIDKAMDIFNKM 404
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 14/366 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSE-HYPVTPSLF 133
A +IF+ RQ +Y LI KLGR +DD + + VTP +
Sbjct: 397 AMDIFN-KMRQQGLSPDAVSYGALIDALCKLGR------VDDAEVKFNQMINEGVTPDIV 449
Query: 134 TYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+ +Y + ++ + F ML P N IL L + L S
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ-RLVDS 508
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV P+ SYN ++ C G I A L M G+ PD SY L+ G C+ +
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A ML+ G P ++Y T+L+ L + K+ EA +L M G DI YN
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ +A K+ +++ S G N++++ ++G L G + A + + G
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ +++ G ++E + + K G AP+ +V ++ ++ + G
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 748
Query: 432 EVLNEI 437
L+++
Sbjct: 749 AYLSKL 754
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G+ PN +N ++ C G + L + + GV PDV SY L+ G
Sbjct: 469 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 528
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ A LLE M++ G PD+ SY TLL+ C+ ++ AY +M G P +
Sbjct: 529 CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGV 588
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ G + R +A ++ +M ++G ++ +Y ++ GLC D A K Q
Sbjct: 589 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQN 648
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ SKG + + +I G+ ++A + + G + T+ ++V +
Sbjct: 649 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGS 708
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEA 451
+E+ + + + K +++++ A
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNA 733
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 4/262 (1%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY-TLFNKMFERGVMPDVESY 239
+L F F K G + N ++ C + A L +M E G MPD SY
Sbjct: 109 HLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSY 168
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFV---PDTLSYTTLLNSLCRKKKLREAYKLLCR 296
IL++GLC + + A++LL M + P+ +SY+T++N + ++ + Y L
Sbjct: 169 NILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLE 228
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M +G PD+V Y TV+ G C+ A V + M NG PN+ +Y L+ G G
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ + ++ M + G P+ +L+ C G+ EA + ++ G P T+ +
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Query: 417 IVPQICAGEEMEKLGEVLNEIV 438
++ + ++ ++LN +V
Sbjct: 349 MLHGYATKGALSEMHDLLNLMV 370
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I AY+LF +M +G+ PDV +Y ++ GL + + + A +L M+N + +Y
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+LN LC+ + EA+K+ + KG +I+ +N ++ + GR DA + +P+NG
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+P++V+YR + L ++G + M G + +AL++ G + A
Sbjct: 927 LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986
Query: 397 GVLEEL 402
L +L
Sbjct: 987 AYLSKL 992
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 3/261 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y LI + + D A K M+ KP N +L + A
Sbjct: 514 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC-KAGRIDSA 572
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ F+ +G+ P +YN ++ S A L+ M G D+ +Y I++ G
Sbjct: 573 YSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNG 632
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + V+ A+ + +++ +KG + +++ ++ +L + + +A L + G +
Sbjct: 633 LCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQN 692
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y VV EG + + M NG PN LV L +G A Y+
Sbjct: 693 VVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 752
Query: 366 LMISKGFSPHFSVSHALIKGF 386
+ + FS S + LI F
Sbjct: 753 KLDERNFSVEASTTSMLISIF 773
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 163/387 (42%), Gaps = 37/387 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++ L + K FS ++ + + + + ++ +SN D A+K F+++
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649
Query: 157 ----LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
L+ N + +L+ A DLF + +G++ N +Y +++
Sbjct: 650 CSKGLQLNIITFNIMIGALLK-----GGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLI 704
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + +LF+ M + G P+ + L++ L + ++RA L + + F +
Sbjct: 705 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAS 764
Query: 273 SYTTLLN---------------------------SLCRK-KKLREAYKLLCRMKVKGCNP 304
+ + L++ +L +K +++ +AY L M +KG P
Sbjct: 765 TTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTP 824
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V YNT++ G + GR +A ++ M ++ N+ +Y ++ GLC D A K
Sbjct: 825 DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMF 884
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
Q + SKG + + +I G+ ++A + + G P T+ ++ +
Sbjct: 885 QSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEE 944
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+E+ + + K D+R++ A
Sbjct: 945 GSLEEFDGLFLTMEKSGTPLDSRLLNA 971
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 18/240 (7%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKS-------QVNRAVDLLEDMLNKGFV---P 269
A LF+++ V ++ L+ + R S + V L M+ ++ P
Sbjct: 33 ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC---REGRAIDAC 326
+ +Y+ L+ CR L + + G D + N ++ G C R G A+D
Sbjct: 93 NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV- 151
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS---PHFSVSHALI 383
+L+ MP GC+P+ VSY L+ GLC++ + A + + +M P+ +I
Sbjct: 152 -LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GF G+VD+ + E++ G P T+ ++ +C + ++ V +++ +K
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A FR ML P N IL L T R A +L+ S N +YN
Sbjct: 808 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR--FSEAKELYLSMINSRTQMNIYTYN 865
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ C + + A+ +F + +G+ ++ ++ I++ L + + A+DL +
Sbjct: 866 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 925
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
G VPD ++Y + +L + L E L M+ G D N +V + G
Sbjct: 926 GLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRG 980
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP + TY ++ ++ A + + SM+ + N IL L N + A
Sbjct: 822 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLC-KSNCVDEA 880
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F +F+S G+ N ++NIM+ A G A LF + G++PDV +YR++ +
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
L + + L M G D + LLN+L R+
Sbjct: 941 LIEEGSLEEFDGLFLTMEKSGTPLD----SRLLNALVRR 975
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 36/391 (9%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 80 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 198
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A L NKM + DV + ++ LC+ V+ A++L ++M KG P+ +
Sbjct: 199 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ +DM
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC----- 387
P++ +Y +LV G C D AK+ + M+SK P + LIKGFC
Sbjct: 319 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378
Query: 388 ------------------------------NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ G D A V ++++ G P T+ ++
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 438
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +C ++EK EV + + K EIK D I
Sbjct: 439 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 5/335 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K + + L+TY LI + + AL M++ +P L+ +
Sbjct: 64 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 123
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L H + A L + G P+T ++ ++ + S A L ++M +RG
Sbjct: 124 LNG-YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 182
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
P++ +Y +++ GLC++ + A++LL M D + + T+++SLC+ + + +A
Sbjct: 183 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M+ KG P++V Y++++ C GR DA ++L DM PNLV++ L+
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+G F A+K MI + P ++L+ GFC ++D+A + E ++ P
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 362
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E E+ E+ + GDT
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 397
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 5/336 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +F +I + D
Sbjct: 184 QPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 239
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F+ M +P + ++ L ++ + A L + + PN ++N +
Sbjct: 240 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMIEKKINPNLVTFNAL 298
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G A L++ M +R + PD+ +Y L+ G C ++++A + E M++K
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++Y TL+ C+ K++ + +L M +G D V Y T++ G +G +A K
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G P++++Y L+ GLC+ G + A + M + +I+G C
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 478
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
GKVD+ + L G P+ T+ ++ +C+
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 514
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 4/339 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L K E + P++ TY LI A + M+E P N
Sbjct: 238 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 297
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ V ++ A L+ K + P+ +YN ++ FC + + A +F M +
Sbjct: 298 LIDAFVKEGKFVE-AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 356
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PDV +Y L++G C+ +V +L +M ++G V DT++YTTL+ L A
Sbjct: 357 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 416
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ +M G PDI+ Y+ ++ G C G+ A +V + M + ++ Y T++ G
Sbjct: 417 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 476
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C G D + KG P+ + +I G C+ + EA +L+++ + G P+
Sbjct: 477 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 536
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
T+ ++ + E++ E+ GD +
Sbjct: 537 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 575
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L A LF K LP+ +N ++ A + +L KM ++ +
Sbjct: 24 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 83
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ CR+SQ++ A+ LL M+ G+ P ++ ++LLN C K++ +A L+ +M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD + + T++ G +A +A +++ M GC PNLV+Y +V GLC +G
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+A + M + + + +I C VD+A + +E+ G P+ T+ +
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI 442
+ +C+ ++L+++++ +I
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKI 288
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
YR +++ +++ A+ L M+ +P + + LL+++ + KK L +M
Sbjct: 14 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 73
Query: 298 KVKGCNPDIVH----YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ +IVH YN ++ FCR + A +L M G P++V+ +L+ G C
Sbjct: 74 Q----RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 129
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A + M+ G+ P LI G K EA +++ +++ G P+ T
Sbjct: 130 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 189
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ ++V +C + + +LN++ +I+ D I
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+DLF S GV PN +YN M+ C + AY L KM E G +P+ +Y L++
Sbjct: 486 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 546 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 176/359 (49%), Gaps = 44/359 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I L +A+ ++L + V P+ FTY ++ Y S ++A+ FR
Sbjct: 48 TYNSIIAALSKAQAMDRAMEVLTVM------VMPNCFTYNSIMHGYCSSGQSEKAIGIFR 101
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M +P N +++ L + A +F S K G+ P+ +Y ++ +
Sbjct: 102 KMCSDGIEPDVVTYNSLMDYLCKNGK-CTEARKIFDSMVKRGLKPDITTYGTLLHGYASK 160
Query: 215 G------------------------DISI-AYT----------LFNKMFERGVMPDVESY 239
G +I I AYT +F+KM ++G+ P+ +Y
Sbjct: 161 GALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNY 220
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
R ++ GLC+ +++ A+ E M++KG P+ + YT+L+++LC K +A +L+ +
Sbjct: 221 RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD 280
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G NP+IV +NT++ C+EGR I++ K+ + + G P++++Y TL+ G C G D
Sbjct: 281 QGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDG 340
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K + M+S G P LI G+C + ++++A + +E+ G P T+ +I+
Sbjct: 341 AMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 155/321 (48%), Gaps = 7/321 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V+P TY +I +++ DRA++ M+ NC N I+ + A
Sbjct: 42 VSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMPNCFTY----NSIMHGYCSSGQS-EKA 96
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ G+ P+ +YN +M C NG + A +F+ M +RG+ PD+ +Y L+ G
Sbjct: 97 IGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHG 156
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + DLL M+ G D + L+ + +++K+ E + +M+ +G P+
Sbjct: 157 YASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPN 216
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V+Y TV+ G C+ GR DA E M G PN+V Y +L+ LC ++ A++ +
Sbjct: 217 AVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIF 276
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
++ +G +P+ + ++ C G+V E+ + + L G P T+ ++ C
Sbjct: 277 EILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAG 336
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+M+ ++L +V V +K D+
Sbjct: 337 KMDGAMKLLTGMVSVGLKPDS 357
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 119/231 (51%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F + G+ PN +Y ++ C G + A F +M ++G+ P+V Y L+ LC
Sbjct: 204 VFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALC 263
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +A +L+ ++L++G P+ + + T+L+SLC++ ++ E+ KL + G NPD++
Sbjct: 264 TYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVI 323
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ G+C G+ A K+L M S G P+ V+Y TL+ G C + A + M
Sbjct: 324 TYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEM 383
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S G +P + ++ G + A + + ++G T+ +I+
Sbjct: 384 ESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 127/308 (41%), Gaps = 69/308 (22%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--------------------------- 231
P+ SYN ++ GD+ AY +++M +R
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 232 ----VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
VMP+ +Y +M G C Q +A+ + M + G PD ++Y +L++ LC+ K
Sbjct: 69 LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN------------ 335
EA K+ M +G PDI Y T++ G+ +G ++ +L M N
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188
Query: 336 -----------------------GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
G PN V+YRT++ GLC G D A + MI KG
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE---EMEK 429
+P+ V +LI C K ++A ++ E+L G P+ + I+ +C E +K
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308
Query: 430 LGEVLNEI 437
L ++L I
Sbjct: 309 LFDLLGHI 316
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 2/274 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A++IFD ++ + +TY L+ + D+L + + +F LI
Sbjct: 131 ARKIFDSMVKR-GLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y + D + F M + P +++ L L A F+ G+
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLC-KLGRLDDAMLNFEQMIDKGL 248
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN Y ++ A C A L ++ ++G+ P++ + ++ LC++ +V +
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L + + + G PD ++Y+TL++ C K+ A KLL M G PD V Y+T++ G+C
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+ R DA + ++M SNG P++++Y ++ GL
Sbjct: 369 KINRMEDALALFKEMESNGVNPDIITYNIILHGL 402
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV SY ++ GL ++ V++A +ML++ PD ++Y +++ +L + + + A ++
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M + P+ YN+++ G+C G++ A + M S+G P++V+Y +L+ LC
Sbjct: 69 LTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G A+K M+ +G P + L+ G+ + G + E +L +++ G
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ ICA + EK+ EV+ K+ +G T
Sbjct: 185 FNIL---ICAYTKQEKVDEVVLVFSKMRQQGLT 214
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD+V YNT++ G +EG A +M P+ V+Y +++ L D A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + +M+ P+ ++++ G+C+ G+ ++A G+ ++ G P T+ ++ +
Sbjct: 67 EVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
C + + ++ + +VK +K D
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPD 146
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 162/376 (43%), Gaps = 32/376 (8%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
RV KL+ + L + F P + H +S++ I GR + + + ++ +++
Sbjct: 72 RVLKLLWNHGPKAL--QFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRT 129
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY-- 181
P F + + Y + PDRA+K F SM E C N IL++L +
Sbjct: 130 RRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEM 189
Query: 182 -------------------------LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L+ A++ F K + +Y ++ F G+
Sbjct: 190 ADNKLFKVFRGRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGE 249
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A +FN+M GV+P V +Y +Q LC+K V A+ + E+ML KG++P++ +Y
Sbjct: 250 VRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNV 309
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++ LC ++ +A + + RMK C P++ YN V+ FC V E M
Sbjct: 310 VIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDAD 369
Query: 337 CLPNLVSYRTLVGGLCDQGMFD---VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
CLPNL +Y L+ + + D A K + M+ +GF P + ++ G G D
Sbjct: 370 CLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQD 429
Query: 394 EACGVLEELLKAGEAP 409
A +L + G P
Sbjct: 430 FAKEILRLQSRCGRLP 445
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 140/309 (45%), Gaps = 27/309 (8%)
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R++ ++ + P ++R+L+LL H A FKS H + S F
Sbjct: 56 RTLEKYPVEWTPNLVDRVLKLLWNHGP---KALQFFKSLDYHPTYAHVSS--------SF 104
Query: 214 NGDISIA---------YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ I IA +TL ++M R + P+ +++ I+ + + +RA+ + M
Sbjct: 105 DHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHE 164
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G V D S+ T+L+ LC+ K++ A L ++ +G + ++ GF R G+ +
Sbjct: 165 HGCVQDLNSFNTILDVLCKSKRVEMADNKLFKV-FRG------RFRILLKGFFRAGQLKE 217
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + M C ++V+Y T+V G G A++ MI +G P + +A I+
Sbjct: 218 AWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQ 277
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
C V+ A V EE+L+ G P+ T+ +++ +C MEK E + + E +
Sbjct: 278 VLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEP 337
Query: 445 DTRIVEAGI 453
+ +I I
Sbjct: 338 NVQIYNVVI 346
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 42/383 (10%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDIL-------ITLKS---- 123
LA + + +QP +H Y + L +A+ + IL I KS
Sbjct: 92 LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGA 151
Query: 124 --EHYPV---TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ YP+ PS+F LI++Y + + D A++TF + KP N IL +V
Sbjct: 152 LMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKD 211
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + LF+ G+ PN ++NI++ C G++ A L +M E G +P + +
Sbjct: 212 KR-TELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ C+K + A++L++ M+ KG D +Y +++LC + +AY LL +M+
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ +P+ V YNT++ GF +EG+ A +V +M PN V+Y L+GG C G F+
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390
Query: 359 VAKKYMQLMISKG--FSPHFSVSHA---------------------LIKGFCNVGKVDEA 395
A + + M + G + H +V+ A L+ C GK+ EA
Sbjct: 391 EALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 450
Query: 396 CGVLEELLKAGEAPHEDTWVMIV 418
L + + G P+ T+ I+
Sbjct: 451 EKFLCHMSRIGLVPNSITYDCII 473
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 138/331 (41%), Gaps = 16/331 (4%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T L+ +++ P A F M++ P N I++ + R + A D F +
Sbjct: 609 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS-CSRRGQMMKANDFFST 667
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV PN +YNI++ F + +L++ M G+ PD ++ L+ GL +
Sbjct: 668 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 727
Query: 252 VNRAVDLL------------EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ V LL +ML G +P Y TL+N +CR ++ A+KL M+
Sbjct: 728 PDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 787
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G V + +V G G+ DA VL+ M LP + ++ TL+ C
Sbjct: 788 LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 847
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K +M G + LI G C G A + EE+ P+ T+ ++V
Sbjct: 848 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 907
Query: 420 QICAGEEM---EKLGEVLNEIVKVEIKGDTR 447
I A + EKL L E + G T+
Sbjct: 908 AISAANNLIQGEKLLTDLQERGLISWGGSTQ 938
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 34/328 (10%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL---NRILELLVT- 177
E P++ TY L+ Y + A++ M+ CK + + N ++ L T
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI---CKGIEADVCTYNVFIDNLCTN 316
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
HR+ A+ L K K + PN +YN ++ F G I +A +FN+M + + P+
Sbjct: 317 HRS--AKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 374
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDM------LNK-----------------GFVPDTLSY 274
+Y L+ G C A+ LL+ M LN+ G D +
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTC 434
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L++SLCR KL EA K LC M G P+ + Y+ ++ G+ G ++A +DM
Sbjct: 435 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 494
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P+ +Y +L+ GLC G AKK++ + + + + L+ C G + E
Sbjct: 495 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 554
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A + +++++ P T+ ++ +C
Sbjct: 555 AVALFDKMVQNNVLPDSYTYSSLLTGLC 582
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 59/363 (16%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
FS DD++ +H PS FTY L + NL + K F + L + +
Sbjct: 486 FSFFDDMIKC--GQH----PSFFTYGSLLKGLCKGGNLVEA--KKFLNRLHYIPGAVDSV 537
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+ L L A LF ++ VLP++ +Y+ ++ C G A LF
Sbjct: 538 MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 597
Query: 228 FERGVM-PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
RG + P+ Y L+ GL + A E+M+ KG PDT+++ +++S R+ +
Sbjct: 598 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 657
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE--------------------------- 319
+ +A M+ G P++ YN ++ GF ++
Sbjct: 658 MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 717
Query: 320 ------------------GRAI--DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G+ I ++ VL +M NG +P Y TL+ G+C G
Sbjct: 718 LILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 777
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K M + GF H A+++G + GK ++A VL+ +L+ P T+ ++
Sbjct: 778 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 837
Query: 420 QIC 422
+ C
Sbjct: 838 RFC 840
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++PN+ +Y+ ++ + GD A++ F+ M + G P +Y L++GLC+ + A
Sbjct: 461 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 520
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L + D++ Y TLL C+ L EA L +M PD Y++++ G
Sbjct: 521 KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTG 580
Query: 316 FCREGRAIDA-CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
CR+G+A+ A C M PN V Y LV GL G A + + M+ KG P
Sbjct: 581 LCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 640
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+A+I ++C +++KA + W + P +
Sbjct: 641 DTVAFNAII----------DSCSRRGQMMKANDFFSTMRWWGVCPNL 677
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 4/236 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+++++R + G I A F + G P V + +++ + + + L +M
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+KG P+ ++ L+N LC + L++A LL +M+ G P IV YNT++ +C++GR
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKGFSPHFSVSHA 381
A ++++ M G ++ +Y + LC AK Y+ L M + SP+ +
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTN--HRSAKAYLLLKKMRKEMISPNEVTYNT 343
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI GF GK+ A V E+ K +P+ T+ ++ C + E+ +L+ +
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N+++ + C +G + A M G++P+ +Y ++ G A +DM+
Sbjct: 435 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 494
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G P +Y +LL LC+ L EA K L R+ D V YNT++ C+ G +
Sbjct: 495 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 554
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPHFSVSHALI 383
A + + M N LP+ +Y +L+ GLC +G A + +G P+ + L+
Sbjct: 555 AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 614
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAP 409
G G A EE++K G P
Sbjct: 615 DGLSKAGHPKAAFYFFEEMMKKGTCP 640
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 120/316 (37%), Gaps = 64/316 (20%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF F K G P+ +Y +++ C G++ A N++ D Y L+
Sbjct: 485 AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLA 544
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL----------------- 287
C+ ++ AV L + M+ +PD+ +Y++LL LCRK K
Sbjct: 545 ETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF 604
Query: 288 -------------------REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
+ A+ M KG PD V +N ++ R G+ + A
Sbjct: 605 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 664
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL---MISKGFSPHFSVSHALIKG 385
M G PNL +Y L+ G + +Y+ L M+ +G P H+LI G
Sbjct: 665 FSTMRWWGVCPNLATYNILLHGFSKK---QALLRYLSLYSTMMREGIFPDKLTFHSLILG 721
Query: 386 FCNVGKVD------------EACGVLEELLKAGEAPHEDTWVMIVPQIC----------A 423
G D E+ VL E+L+ G P ++ ++ +C
Sbjct: 722 LSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 781
Query: 424 GEEMEKLGEVLNEIVK 439
+EME LG +E+ +
Sbjct: 782 KDEMEALGFGSHEVAE 797
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L++ ++ ++ AV+ E + GF P + +L S+ + K+ + L M
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG P++ +N ++ G C EG A +L+ M NG +P +V+Y TL+ C +G +
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + MI KG + I C + +A +L+++ K +P+E T+ ++
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ +V NE+ K ++ + A IG
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 381
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 174/364 (47%), Gaps = 5/364 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + P++ HS S++ I GR + + + ++ +++ + F +
Sbjct: 95 ALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIA 154
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ + + PDRA+K F SM E C N IL++L + +LFK +
Sbjct: 155 ERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVL-RGKF 213
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ SYNI+ +C A + +M ERG+ P + +Y IL++G R Q+ A +
Sbjct: 214 KADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWE 273
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
M + D ++YTT+++ +++ A K+ M +G P YN ++ C
Sbjct: 274 FFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLC 333
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
++ +A + E+M G +PNL +Y ++ GL G D A ++++ M + G P+
Sbjct: 334 KKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQ 393
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL---GEVL 434
+ I+ FC+ G V++ + E+ + G P+ DT+ +++ + ++ E L G++L
Sbjct: 394 TYNVAIRYFCDAGDVEKGLSMFEK-MGQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 452
Query: 435 NEIV 438
E+V
Sbjct: 453 LEMV 456
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+AL+ + M+E P N +L+ L+ A++ F + V + +Y M
Sbjct: 235 KALEVLKEMVERGLTPTITTYNILLKGYF-RAGQLKEAWEFFLQMKEREVEIDVVTYTTM 293
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ F G+I A +FN+M G++P +Y ++Q LC+K V AV + E+M+ KG+
Sbjct: 294 VHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGY 353
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
VP+ +Y ++ L + +A + + RMK GC P++ YN + FC G
Sbjct: 354 VPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLS 413
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD---VAKKYMQLMISKGFSPHFSVSHALIK 384
+ E M G LPNL +Y L+ + + + VA K + M+ +GF P + ++
Sbjct: 414 MFEKM-GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLN 472
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHE 411
G G A +L K G P +
Sbjct: 473 GLLLTGNQAFAKEILRLQSKCGRLPRQ 499
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
D + L +M R + P +++ I+ + + +RA+ + M G D S+
Sbjct: 127 DYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFN 186
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T+L+ LC+ K++ AY L ++ D+V YN + G+C R A +VL++M
Sbjct: 187 TILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVER 246
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G P + +Y L+ G G A ++ M + ++ GF VG++ A
Sbjct: 247 GLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRA 306
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
V E++ G P T+ ++ +C + +E + E+VK
Sbjct: 307 RKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVK 350
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS TY +I++ + + + A+ F M++ P N ++ L H + A
Sbjct: 318 ILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLF-HAGNMDKA 376
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + G PN ++YN+ +R FC GD+ ++F KM +G +P++++Y +L+
Sbjct: 377 MEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM-GQGSLPNLDTYNVLISA 435
Query: 246 L-CRKSQVNRAV--DLLEDMLNKGFVPDTLSYTTLLNSL 281
+ RK + V LL +M+++GF+P ++ +LN L
Sbjct: 436 MFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGL 474
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 78/174 (44%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
S+ ++ R + + + L+ RM+ + P + + F G+ A KV M
Sbjct: 114 SFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSM 173
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+GC +L S+ T++ LC ++A + ++ F + + G+C + +
Sbjct: 174 REHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRT 233
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A VL+E+++ G P T+ +++ ++++ E ++ + E++ D
Sbjct: 234 PKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDV 287
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 1/208 (0%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
SYN ++ + C + A+ +F+ M ER V+PDV SY IL+ G C+ ++ RA L +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M++ VP+ +Y LN L RK ++ +A + M GC+PD++ Y+T++ GF +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A ++ E M S GC PN V+Y L+ GLC + D A + + M+ +G P
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAP 409
L+ GFCNVGK+++A V +E++ G P
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDP 330
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 1/215 (0%)
Query: 182 LRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ AF +F + + V+P+ SY+I++ FC ++ A L+ +M + +P+V +Y
Sbjct: 137 VHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 196
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ GL RK ++ A + E+M++ G PD ++Y+TL++ +K +A++L M +
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC P+ V YN ++ G C+E + +A ++ M GC P+ V+Y TL+ G C+ G + A
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ M+SKG P + L+KGF GK EA
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 351
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 39/335 (11%)
Query: 78 AKEIFDYASRQPNFRHSNS-TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY- 135
A+E +R + R S+ +Y L+ L +AK I T+ SE V P + +Y
Sbjct: 103 AQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSER-SVVPDVVSYS 161
Query: 136 -LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL------------------- 175
LI + + + RA K ++ M++ NC P N L L
Sbjct: 162 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISA 221
Query: 176 ------VTHRNYLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
+T+ + A +LF++ G PN +YN ++ C A
Sbjct: 222 GCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEA 281
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ LF KM ERG PD +Y L+ G C ++ +AV++ ++M++KG PD ++Y LL
Sbjct: 282 HELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 341
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLP 339
R K EA +L M + C PD V +N ++ G + R DA +V E M + GC P
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 401
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+LV+Y +L+ GLC + A K + + SP
Sbjct: 402 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 38/270 (14%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM---- 262
+++ C G + A +L M +RG PD+ ++ +L+ LC+ ++ A + L+ M
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114
Query: 263 -------------LN---------------------KGFVPDTLSYTTLLNSLCRKKKLR 288
LN + VPD +SY+ L++ C+ +L
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A KL +M C P++ YN + G R+GR DA V E+M S GC P++++Y TL+
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G D A + + MIS+G P+ + L+ G C K DEA + ++++ G
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P + T+ ++ C ++E+ EV +E+V
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMV 324
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 8/232 (3%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP-- 184
+P + TY LI ++ + D+A + F +M+ C+P N +L L +P
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKES---KPDE 280
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF+ + G P+ +Y ++ FC G I A +F++M +G PDV +Y L++
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 340
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN 303
G R + A L + M+++ PDT+S+ +++ L + K+L +A ++ RM+ GC+
Sbjct: 341 GFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 400
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
PD+V YN+++ G C E R +A KV +++ P+ ++ L+ + G
Sbjct: 401 PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 172/344 (50%), Gaps = 4/344 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP-VTPSLFTY 135
L F +A++QP + HS ++ L + + F + ++ ++ E+ + P LF
Sbjct: 116 LGYRFFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFVV 175
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI+ +A +N+ +A++ M ++ +P +L+ L + ++ A +F+ +
Sbjct: 176 LIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKN-GSVKDASKVFEDM-RE 233
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ PN + + ++ +C G + A + +M E G+ PD+ + L+ G ++ A
Sbjct: 234 KIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 293
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCR-KKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
DLL DM +G+ P+ YT L+ +LCR +K++ EA ++ M+ GC DIV Y ++
Sbjct: 294 YDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 353
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
GFC+ G VL+DM G +P+ V+Y ++ + F+ + ++ M G P
Sbjct: 354 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHP 413
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + +I+ CN +V EA + E+ G +P D +V+++
Sbjct: 414 DLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMI 457
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ +++R F + A + ++M + G PD + L+ LC+ V A + EDM
Sbjct: 173 FVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMR 232
Query: 264 NKGFVPDTLSY-TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
K +P L Y T+LL CR+ KL EA ++L +MK G PDIV + ++ G+ G+
Sbjct: 233 EK--IPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 290
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA +L DM G PN Y L+ LC + D A + M G A
Sbjct: 291 ADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 350
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI GFC G +D+ VL+++ K G P + T++ I + A E+ E+ E L I K++
Sbjct: 351 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQI---LVAHEKKEQFEECLELIEKMK 407
Query: 442 IKG 444
G
Sbjct: 408 QIG 410
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 151/358 (42%), Gaps = 17/358 (4%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
PN R+ S L+ R ++L+ +K +FT L+ YA +
Sbjct: 237 PNLRYFTS----LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 292
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A M + +P +++ L + A +F ++G + +Y ++
Sbjct: 293 AYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 352
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G I Y++ + M ++GVMP +Y ++ +K Q ++L+E M G
Sbjct: 353 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCH 412
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD L Y ++ C ++++EA +L M+ G +P + ++ GF +G I+AC
Sbjct: 413 PDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSH 472
Query: 329 LEDMPSNGCL--PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA--LIK 384
++M S G P + ++L+ L ++AK + +K S +VS I
Sbjct: 473 FKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIH 532
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
G V EAC ++++ P +T+V + M+ L ++ N + EI
Sbjct: 533 ALFAKGHVKEACSYCLDMMEMDLMPQPNTYVKL---------MKGLNKLYNRTIAAEI 581
>gi|356555104|ref|XP_003545878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Glycine max]
Length = 395
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 15/351 (4%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P L+ S + P F + + +F S LI KL +A + I + T
Sbjct: 50 TPKEATTLLTSLTHPSSTLTFFHLYTSRKDFHPSEPLCTTLISKLAQAHQLNPILTLHQT 109
Query: 121 LKSEHYPVTPSLFTYLIKIYAES-NLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTH 178
L ++ + F LIK YA S D AL+T M F+C P + N +L +LV
Sbjct: 110 L-TKRRRFSDDFFYTLIKAYAHSFQRVDMALQTLHDMNSLFHCSPSTRTFNFVLNVLVNT 168
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R Y A +LF A GV P+ + NI+++ C G++ A+ + + E G + +
Sbjct: 169 RLY-AAARELFLHAPPLGVSPDACTLNIVIKGLCARGEMDAAFGVLEEFHELGCEANART 227
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y LM+GLC K +V A LLE M +G D Y L+ L + ++ E +++L M
Sbjct: 228 YATLMKGLCEKGRVEEAFGLLEKMEEEGVETDVAVYNVLIGGLRKVGRVDEGWRVLEGMV 287
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+G P+ YN V+ G +GR + V+E M + G +P+ +Y+ LV G C++G+
Sbjct: 288 GRGVCPNEGTYNEVLCGLVEKGRVEEGKGVVERMGNKGFVPSFGAYKDLVKGFCEKGLVG 347
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCN--------VGKVDEACGVLEE 401
+ + M KGF P + ++K + VG +D GVLE+
Sbjct: 348 EVEWVVWDMAWKGFVPKMGMWRRIVKCVVDRERSDGWVVGAID---GVLED 395
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P ++ ++ L A +L G PD + ++ LC + ++ A+ +
Sbjct: 153 PSTRTFNFVLNVLVNTRLYAAARELFLHAPPLGVSPDACTLNIVIKGLCARGEMDAAFGV 212
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L GC + Y T++ G C +GR +A +LE M G ++ Y L+GGL
Sbjct: 213 LEEFHELGCEANARTYATLMKGLCEKGRVEEAFGLLEKMEEEGVETDVAVYNVLIGGLRK 272
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G D + ++ M+ +G P+ + ++ G G+V+E GV+E + G P
Sbjct: 273 VGRVDEGWRVLEGMVGRGVCPNEGTYNEVLCGLVEKGRVEEGKGVVERMGNKGFVPSFGA 332
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+ +V C E +GEV + + KG
Sbjct: 333 YKDLVKGFC---EKGLVGEVEWVVWDMAWKG 360
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
K F P TTL++ L + +L L + + D Y T++ + + +D
Sbjct: 78 KDFHPSEPLCTTLISKLAQAHQLNPILTLHQTLTKRRRFSDDFFY-TLIKAYAHSFQRVD 136
Query: 325 -ACKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A + L DM S C P+ ++ ++ L + ++ A++ G SP + +
Sbjct: 137 MALQTLHDMNSLFHCSPSTRTFNFVLNVLVNTRLYAAARELFLHAPPLGVSPDACTLNIV 196
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
IKG C G++D A GVLEE + G + T+ ++ +C E ++ E + K+E
Sbjct: 197 IKGLCARGEMDAAFGVLEEFHELGCEANARTYATLMKGLC---EKGRVEEAFGLLEKMEE 253
Query: 443 KGDTRIVEAGIGLEDYLIGKTRSRPR 468
+G VE + + + LIG R R
Sbjct: 254 EG----VETDVAVYNVLIGGLRKVGR 275
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 168/339 (49%), Gaps = 8/339 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +TY LI + + A F M+E P N +++ ++ L A
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC-NKGDLERA 373
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F K G++P+ +YN+++ A G + A + +M ++G++PD +Y IL+ G
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R +A DL +ML+KG P ++YT+L+ L R+ +++EA L ++ +G +PD
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ +N +V G C G A +L++M P+ V++ TL+ G C +G + A+ +
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 553
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G P + LI G+ G + +A V +E+L G P T+ ++ +C +
Sbjct: 554 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 613
Query: 426 EMEKLGEVLNEIVKVEIKGDT----RIVEAGIGLEDYLI 460
E + E+L E+V I D ++E G+G D L+
Sbjct: 614 EGDLAEELLKEMVNKGISPDDSTYLSLIE-GMGNVDTLV 651
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 170/346 (49%), Gaps = 12/346 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A+ I D A R + TY LI K GR + S + D ++ + + P+ T
Sbjct: 303 ARRILD-AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG-----LVPNAVT 356
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y LI Y +RA M++ P N ++ L + A D+ K
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME-GRMGEADDMIKEM 415
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G++P+ +YNI++ + G+ A+ L N+M +G+ P +Y L+ L R++++
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A DL E +L++G PD + + +++ C + A+ LL M K PD V +NT+
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CREG+ +A +L++M G P+ +SY TL+ G +G A + M+S GF
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+P +ALIK C + D A +L+E++ G +P + T++ ++
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 135/259 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF F + G++P ++ N M+ F + +A+ L+ +MF + V ++ I++
Sbjct: 198 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 257
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC++ ++ +A + + M GF P+ +SY T+++ + + A ++L M+VKG P
Sbjct: 258 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP 317
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D Y +++ G C+EGR +A + + M G +PN V+Y TL+ G C++G + A Y
Sbjct: 318 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 377
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ KG P S + L+ G++ EA +++E+ K G P T+ +++
Sbjct: 378 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 437
Query: 425 EEMEKLGEVLNEIVKVEIK 443
+K ++ NE++ I+
Sbjct: 438 GNAKKAFDLHNEMLSKGIE 456
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 165/351 (47%), Gaps = 12/351 (3%)
Query: 99 LILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE 158
L L LKL R ++ L +E + + S Y I + LK R +
Sbjct: 221 LSLFLKLNRM-------EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIG 273
Query: 159 F----NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
F KP N I+ + R + A + + G+ P++ +Y ++ C
Sbjct: 274 FMEGLGFKPNVVSYNTIIHGY-SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 332
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A LF+KM E G++P+ +Y L+ G C K + RA ++M+ KG +P +Y
Sbjct: 333 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 392
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+++L + ++ EA ++ M+ KG PD + YN ++ G+ R G A A + +M S
Sbjct: 393 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 452
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P V+Y +L+ L + A + ++ +G SP + +A++ G C G V+
Sbjct: 453 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 512
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A +L+E+ + P E T+ ++ C ++E+ +L+E+ + IK D
Sbjct: 513 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 2/334 (0%)
Query: 119 ITLKSEHYPVTPSL-FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
+TL + V S+ F L+++ E D A K F M E P + N +L L +
Sbjct: 167 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFL- 225
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
N + A+ L+ + + ++NIM+ C G + A M G P+V
Sbjct: 226 KLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVV 285
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY ++ G + + A +L+ M KG PD+ +Y +L++ +C++ +L EA L +M
Sbjct: 286 SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 345
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P+ V YNT++ G+C +G A ++M G +P++ +Y LV L +G
Sbjct: 346 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 405
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M KG P + LI G+ G +A + E+L G P T+ +
Sbjct: 406 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 465
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+ + M++ ++ +I+ + D + A
Sbjct: 466 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
S STY +L+ L DD++ ++ + + P TY LI Y+ +A
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKK--GIIPDAITYNILINGYSRCGNAKKAFD 445
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ML +P ++ +L + RN ++ A DLF+ GV P+ +N M+
Sbjct: 446 LHNEMLSKGIEPTHVTYTSLIYVL-SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C NG++ A+ L +M + V PD ++ LMQG CR+ +V A LL++M +G PD
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 564
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SY TL++ R+ +++A+++ M G NP ++ YN ++ C+ A ++L++
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624
Query: 332 MPSNGCLPNLVSYRTLVGGL 351
M + G P+ +Y +L+ G+
Sbjct: 625 MVNKGISPDDSTYLSLIEGM 644
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 1/310 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
Y +L R F+ + + + TP + L++ + + A+ F M
Sbjct: 111 AYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGM 170
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P + I+ + A L A G +PN YN ++ +C GD
Sbjct: 171 WPDGCAP-DSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGD 229
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ +A +F M +G +P+V +Y L+ G C+ +V RA+ L M+ G P+ ++YTT
Sbjct: 230 LELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTT 289
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ C + L A++LL M+ G P+ ++ C+ GR +A + L + G
Sbjct: 290 LIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKG 349
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
N V Y +++ LC G FD A MQ +I++GF P + +LI G C K+ EA
Sbjct: 350 IKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAI 409
Query: 397 GVLEELLKAG 406
+L +++++G
Sbjct: 410 SLLNDMIESG 419
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 146/314 (46%), Gaps = 1/314 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T + Y + L A + F M + C P +L+ L +R A +F
Sbjct: 112 YTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG-AGMVREAMAVFAGM 170
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P++ Y+IM+ C G A L +G +P+V Y L+ G C +
Sbjct: 171 WPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDL 230
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+D+ + M +KG +P+ +YT L+ C+ K+ A L RM G P++V Y T+
Sbjct: 231 ELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTL 290
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C EG A ++L M + G PN + L+ LC G + A++++ ++ KG
Sbjct: 291 IQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGI 350
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + ++I C GK D A ++++++ G P + ++ +C ++ +
Sbjct: 351 KVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAIS 410
Query: 433 VLNEIVKVEIKGDT 446
+LN++++ ++ +
Sbjct: 411 LLNDMIESGVQANA 424
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 16/301 (5%)
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ +P R L T+ +++ C H L A S + G+ P++
Sbjct: 67 ARMPVRNLHTYTTLINAYC----------------HAGDLPAAKRHLSSLLRAGLAPDSH 110
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y + +C G + A LF M +RG +Y L+QGLC V A+ + M
Sbjct: 111 AYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGM 170
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G PD+ Y+ +++ LC + EA LL KG P++ YN ++ G+C G
Sbjct: 171 WPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDL 230
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A + + M S GCLPN+ +Y L+ G C G + A MI G +P+ L
Sbjct: 231 ELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTL 290
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I+G C+ G ++ A +L + G AP+E T ++++ +C +E+ + L +V+ I
Sbjct: 291 IQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGI 350
Query: 443 K 443
K
Sbjct: 351 K 351
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 166/338 (49%), Gaps = 19/338 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + +S +RA+ + M+E P +++ + +L AF L S
Sbjct: 252 YTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCS-EGHLEHAFRLLHSM 310
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ PN + +++ A C +G I A + ++G+ + Y ++ LC+ +
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF 370
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L++ ++ +GFVPD Y++L++ LCR+ KL EA LL M G + V + +
Sbjct: 371 DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430
Query: 313 VLGFCREGRAIDACKVLED-MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ RE R+ D+ K++ D M + G P++V+Y + C G + A+ M MI G
Sbjct: 431 IDKHLREFRS-DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHG 489
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE------ 425
P+ + + LIKG+ N+G V +A L+ ++ G P+++++ +++ +
Sbjct: 490 VRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLV 549
Query: 426 ----------EMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+M+ L E+L E++K++ + + + I
Sbjct: 550 ADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFI 587
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A D+FK G LPN ++Y ++ FC +G + A L+++M E G+ P+V +Y
Sbjct: 230 LELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTT 289
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+QG C + + A LL M G P+ + L+++LC+ ++ EA + L + KG
Sbjct: 290 LIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKG 349
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ V Y +++ C+ G+ A +++ + + G +P+ Y +L+ GLC + A
Sbjct: 350 IKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAI 409
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ MI G + LI + D + + + AG P T+ + +
Sbjct: 410 SLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSY 469
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C ME ++ +++ ++
Sbjct: 470 CQDGRMEDAESMMIQMIDHGVR 491
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 16/253 (6%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
HGV PN +YN +++ + G +S A++ M + G P+ ESY +L+ L +K+ +
Sbjct: 488 HGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHD 547
Query: 255 AV----------------DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
V +LLE+++ + Y + L + +L EA L M+
Sbjct: 548 LVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQ 607
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P Y ++ R +A + L+ M LP L SYR ++ LC++G F
Sbjct: 608 SANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFH 667
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
AK ++SK ++ LI G G + +L + + P + +
Sbjct: 668 TAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLT 727
Query: 419 PQICAGEEMEKLG 431
+I E +++
Sbjct: 728 GEITVTSEAQEIA 740
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P I NT+++ R G D + MP + NL +Y TL+ C G AK++
Sbjct: 41 PPIRCLNTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKRH 96
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ ++ G +P + + G+C G AC + + + G A T+ ++ +C
Sbjct: 97 LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156
Query: 424 G 424
Sbjct: 157 A 157
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A S K LP +SY ++ A C G A ++F + + D +++I
Sbjct: 631 LKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKI 690
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
L+ GL +K LL M + P + Y+ L + + +E
Sbjct: 691 LIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 168/339 (49%), Gaps = 8/339 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +TY LI + + A F M+E P N +++ ++ L A
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC-NKGDLERA 351
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F K G++P+ +YN+++ A G + A + +M ++G++PD +Y IL+ G
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R +A DL +ML+KG P ++YT+L+ L R+ +++EA L ++ +G +PD
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ +N +V G C G A +L++M P+ V++ TL+ G C +G + A+ +
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 531
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G P + LI G+ G + +A V +E+L G P T+ ++ +C +
Sbjct: 532 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 591
Query: 426 EMEKLGEVLNEIVKVEIKGDT----RIVEAGIGLEDYLI 460
E + E+L E+V I D ++E G+G D L+
Sbjct: 592 EGDLAEELLKEMVNKGISPDDSTYLSLIE-GMGNVDTLV 629
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 170/346 (49%), Gaps = 12/346 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
A+ I D A R + TY LI K GR + S + D ++ + + P+ T
Sbjct: 281 ARRILD-AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG-----LVPNAVT 334
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y LI Y +RA M++ P N ++ L + A D+ K
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME-GRMGEADDMIKEM 393
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G++P+ +YNI++ + G+ A+ L N+M +G+ P +Y L+ L R++++
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A DL E +L++G PD + + +++ C + A+ LL M K PD V +NT+
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CREG+ +A +L++M G P+ +SY TL+ G +G A + M+S GF
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+P +ALIK C + D A +L+E++ G +P + T++ ++
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 135/259 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF F + G++P ++ N M+ F + +A+ L+ +MF + V ++ I++
Sbjct: 176 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 235
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC++ ++ +A + + M GF P+ +SY T+++ + + A ++L M+VKG P
Sbjct: 236 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP 295
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D Y +++ G C+EGR +A + + M G +PN V+Y TL+ G C++G + A Y
Sbjct: 296 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ KG P S + L+ G++ EA +++E+ K G P T+ +++
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 415
Query: 425 EEMEKLGEVLNEIVKVEIK 443
+K ++ NE++ I+
Sbjct: 416 GNAKKAFDLHNEMLSKGIE 434
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 165/351 (47%), Gaps = 12/351 (3%)
Query: 99 LILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE 158
L L LKL R ++ L +E + + S Y I + LK R +
Sbjct: 199 LSLFLKLNRM-------EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIG 251
Query: 159 F----NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
F KP N I+ + R + A + + G+ P++ +Y ++ C
Sbjct: 252 FMEGLGFKPNVVSYNTIIHG-YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 310
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A LF+KM E G++P+ +Y L+ G C K + RA ++M+ KG +P +Y
Sbjct: 311 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 370
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+++L + ++ EA ++ M+ KG PD + YN ++ G+ R G A A + +M S
Sbjct: 371 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 430
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G P V+Y +L+ L + A + ++ +G SP + +A++ G C G V+
Sbjct: 431 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 490
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A +L+E+ + P E T+ ++ C ++E+ +L+E+ + IK D
Sbjct: 491 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 2/334 (0%)
Query: 119 ITLKSEHYPVTPSL-FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
+TL + V S+ F L+++ E D A K F M E P + N +L L +
Sbjct: 145 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFL- 203
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
N + A+ L+ + + ++NIM+ C G + A M G P+V
Sbjct: 204 KLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVV 263
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY ++ G + + A +L+ M KG PD+ +Y +L++ +C++ +L EA L +M
Sbjct: 264 SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 323
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P+ V YNT++ G+C +G A ++M G +P++ +Y LV L +G
Sbjct: 324 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 383
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M KG P + LI G+ G +A + E+L G P T+ +
Sbjct: 384 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 443
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+ + M++ ++ +I+ + D + A
Sbjct: 444 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALK 151
S STY +L+ L DD++ ++ + + P TY LI Y+ +A
Sbjct: 366 SVSTYNLLVHALFMEGRMGEADDMIKEMRKK--GIIPDAITYNILINGYSRCGNAKKAFD 423
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
ML +P ++ +L + RN ++ A DLF+ GV P+ +N M+
Sbjct: 424 LHNEMLSKGIEPTHVTYTSLIYVL-SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C NG++ A+ L +M + V PD ++ LMQG CR+ +V A LL++M +G PD
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 542
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+SY TL++ R+ +++A+++ M G NP ++ YN ++ C+ A ++L++
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602
Query: 332 MPSNGCLPNLVSYRTLVGGL 351
M + G P+ +Y +L+ G+
Sbjct: 603 MVNKGISPDDSTYLSLIEGM 622
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 165/366 (45%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + ++ +I
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F+ M E GV
Sbjct: 88 DSYGKAGIVQESVKLFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
TKSY+ + + G +A FNKM G+ P ++ +++ G +V A
Sbjct: 112 ERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+DM ++ PD ++Y T++N R KK+ EA K MK + P +V Y T++ G+
Sbjct: 172 FFDDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
+ DA +++E+M G PN ++Y TL+ GLC+ A+ ++ M+ K +P
Sbjct: 232 SVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI G C G +D A VL+ +++ + +++ C ++ +K ++L++
Sbjct: 292 SIFMRLISGQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 153/313 (48%), Gaps = 5/313 (1%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D AL +F +L + P ++L + ++Y L GV PN +
Sbjct: 24 NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHY-STVLSLSTQMDSFGVPPNVYT 82
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
NI++ +FC + A+++ K+ + G PD ++ L++GLC + ++ A+ L + M+
Sbjct: 83 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
++GF P+ ++Y TL+N LC+ A +LL M+ C PD+V Y +++ C++ +
Sbjct: 143 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 202
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A + M G P++ +Y +LV LC+ + + M++ P + ++
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
C GKV EA +++ +++ G P T+ ++ C EM++ +V + +V+
Sbjct: 263 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 322
Query: 444 GD----TRIVEAG 452
D T ++ AG
Sbjct: 323 PDVISYTTLINAG 335
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A++ RSM + NC+P I++ L R + AF+
Sbjct: 148 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ-VTEAFN 206
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +Y ++ A C + TL N+M ++PDV + ++ LC
Sbjct: 207 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 266
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V A ++++ M+ +G PD ++YTTL++ C + ++ EA K+ M KG PD++
Sbjct: 267 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 326
Query: 308 HYNTV----------------VLGFCRE------GRAIDACK------------VLEDMP 333
Y T+ V+G +E G A++ + +L +M
Sbjct: 327 SYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMV 386
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
++ +PN+V + T+V LC +G A + +MI +G P+
Sbjct: 387 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 184/403 (45%), Gaps = 42/403 (10%)
Query: 47 QQESSISNSKSPIG---SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILI 102
Q E I+++ +G SP V +++ + S+ +LA F +A RQ F ++ + LI
Sbjct: 109 QPEPKIASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLI 168
Query: 103 LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
LG+ K F L+ ++ T++ ++ F +++ YA + A++TF M F K
Sbjct: 169 EALGKIKQFRLVWSLVETMRCRGL-LSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLK 227
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAY 221
N +++ L + ++ A ++K + G +P+ K+Y ++M + D+ +
Sbjct: 228 TELSDYNWLIDTLSKSKQ-VKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVK 286
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
T++ +M + G+ PDV +Y +L+ C+ + + A+ + +M G +P Y L+N L
Sbjct: 287 TMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGL 346
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS------- 334
+++L EA K K G ++ N VV +CR + A K++++M
Sbjct: 347 GSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNS 406
Query: 335 ----------------------------NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+GC P L +Y +VG C G D+A K +
Sbjct: 407 RTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQ 466
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M KG P + ALI G C +++EAC +E+L G P
Sbjct: 467 MGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 509
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ E+L N A F+ A + G + ++ ++ A + ++L M
Sbjct: 130 VAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRC 189
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
RG++ ++++++++ R +V AV+ E M G + Y L+++L + K++++
Sbjct: 190 RGLLSK-DTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKK 248
Query: 290 AYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A + MK KG PD+ Y ++ G+ E + + ++M G P++V+Y L+
Sbjct: 249 AQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLI 308
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
C G D A K M + G P V LI G + ++DEA E K+G
Sbjct: 309 SAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFP 368
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
T +V C + + ++++E+ K ++ ++R
Sbjct: 369 MEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSR 407
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S Y +LI LG + K +P+ ++ Y ++ A K
Sbjct: 335 SPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMV 394
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M + P + + IL L+ + + A+++F+ G P +Y +M+ FC
Sbjct: 395 DEMRKCKVGPNSRTYDVILHYLIKSQKF-EEAYNIFQRMGIDGCEPQLNTYTMMVGMFCS 453
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG + +A ++ +M E+GV+P + + L+ GLC ++++ A ++ML+KG P
Sbjct: 454 NGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQL 513
Query: 274 YTTLLNSLCRKKKLREAYKLLCRM 297
++ L +L + ++ A ++ ++
Sbjct: 514 FSNLKEALVQGGRISLAQEVALKL 537
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 8/315 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT--HRNYLRPAFDLFK 190
FT LI + N + A+ M+E KP I++ L H NY A LF
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY---ALSLFD 201
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+G+ P+ Y ++ C +G A +L M +R + PDV ++ L+ ++
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A +L +M+ P+ +YT+L+N C + + EA ++ M+ KGC PD+V Y
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ GFC+ + DA K+ +M G N ++Y TL+ G G +VA++ M+S+
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK---AGEAPHEDTWVMIVPQICAGEEM 427
G P+ + L+ C GKV +A + E++ K G AP+ T+ +++ +C ++
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 428 EKLGEVLNEIVKVEI 442
EK V ++ K E+
Sbjct: 442 EKALMVFEDMRKREM 456
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
YL +F K G P+ ++ ++ FC + A ++ N+M E G+ PDV Y
Sbjct: 124 YLASSF--LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ LC+ VN A+ L + M N G PD + YT+L+N LC + R+A LL M +
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
PD++ +N ++ F +EG+ +DA ++ +M PN+ +Y +L+ G C +G D A
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ LM +KG P +LI GFC KVD+A + E+ + G + T+ ++
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLN--RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ AL F M+E +PLP ++ ++L ++ + + +L GV + +
Sbjct: 54 NEALDLFTHMVE--SRPLPSIIDFTKLLNVIAKMKKF-DVVINLCDHLQIMGVSHDLYTC 110
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N++M FC + +A + KM + G PD+ ++ L+ G C +++ A+ ++ M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD + YTT+++SLC+ + A L +M+ G PD+V Y ++V G C GR D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P+++++ L+ +G F A++ MI +P+ +LI
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
GFC G VDEA + + G P + ++ C ++++ ++ E+ + + G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 445 DT 446
+T
Sbjct: 351 NT 352
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 13/329 (3%)
Query: 96 STYLILILKLGRAKY-FSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKT 152
+T + + K G Y SL D + E+Y + P ++T L+ S A
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQM------ENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
R M + KP N +++ V +L A +L+ + + PN +Y ++ FC
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFL-DAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A +F M +G PDV +Y L+ G C+ +V+ A+ + +M KG +T+
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YTTL+ + K A ++ M +G P+I YN ++ C G+ A + EDM
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 333 PS---NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+G PN+ +Y L+ GLC G + A + M + +I+G C
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIV 418
GKV A + L G P+ T+ ++
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H A DLF + LP+ + ++ + L + + GV D+
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ +LM C+ SQ A L M+ GF PD +++T+L+N C ++ EA ++ +M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD+V Y T++ C+ G A + + M + G P++V Y +LV GLC+ G +
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M + P +ALI F GK +A + E+++ AP+ T+ +
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 418 VPQIC 422
+ C
Sbjct: 289 INGFC 293
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++FTY LI + D A + F M C P ++ + + A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK-VDDA 336
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G+ NT +Y +++ F G ++A +F+ M RGV P++ +Y +L+
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 246 LCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
LC +V +A+ + EDM + G P+ +Y LL+ LC KL +A + M+ +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ I+ Y ++ G C+ G+ +A + +PS G PN+V+Y T++ GL +G+ A
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 363 YMQLMISKGFS 373
+ M G S
Sbjct: 517 LFRKMKEDGVS 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 10/245 (4%)
Query: 208 MRAFCF------NGDISIAYT----LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+RAFC NG S+ + LF M E +P + + L+ + + + + ++
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L + + G D + L+N C+ + A L +M G PDIV + +++ GFC
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R +A ++ M G P++V Y T++ LC G + A M + G P
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +L+ G CN G+ +A +L + K P T+ ++ + E+ NE+
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 438 VKVEI 442
+++ I
Sbjct: 274 IRMSI 278
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+YR +++ Q N A+DL M+ +P + +T LLN + + KK L +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
++ G + D+ N ++ FC+ + A L M G P++V++ +L+ G C
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A + M+ G P + +I C G V+ A + +++ G P + +
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
V +C +L + K +IK D A I
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 165/376 (43%), Gaps = 37/376 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
Y +I R+ F + +++ +K + +P + TY LI D ALK
Sbjct: 148 AYNAVISGFCRSDRFDAANRVILRMKYRGF--SPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+LE NC P ++E + H + + A L G+ P+ +YN+++R C
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGS-IDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKR 264
Query: 215 GDISIAYT--------------------------------LFNKMFERGVMPDVESYRIL 242
G + A+ L + M +G P++ +Y +L
Sbjct: 265 GLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVL 324
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LCR + AVD+L M KG PD Y L+++ C++ K+ A + M G
Sbjct: 325 ISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGW 384
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDIV+YNT++ C++GRA +A + + + GC PN SY T+ G L G A
Sbjct: 385 LPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALT 444
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+S G P ++LI C G VDEA G+L ++ + P ++ +++ +C
Sbjct: 445 MILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLC 504
Query: 423 AGEEMEKLGEVLNEIV 438
+ EVL +V
Sbjct: 505 KAHRIVDAIEVLAVMV 520
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 121/226 (53%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PN +Y++++ + C +G A + M E+G+ PD Y L+ C++ +V+ A
Sbjct: 313 GCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLA 372
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ ++DM++ G++PD ++Y T++ SLC+K + EA + +++ GC P+ YNT+
Sbjct: 373 IGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGA 432
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
G I A ++ +M SNG P+ ++Y +L+ LC GM D A + M + P
Sbjct: 433 LWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPT 492
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ G C ++ +A VL ++ G P+E T+ ++V +
Sbjct: 493 VISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P++ +YN ++ FC + A + +M RG PDV +Y IL+ LC + +++ A+ +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
++ +L P ++YT L+ + + +A +LL M +G PD+ YN +V G C+
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 319 --------------------------------EGRAIDACKVLEDMPSNGCLPNLVSYRT 346
EGR +++ DM GC PN+V+Y
Sbjct: 264 RGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSV 323
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ LC G A +++M KG +P LI FC GKVD A G +++++ AG
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
P + I+ +C + + E LN K+E G
Sbjct: 384 WLPDIVNYNTIMGSLC---KKGRADEALNIFKKLEEVG 418
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 92/174 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G LP+ +YN +M + C G A +F K+ E G P+ SY + L RA
Sbjct: 383 GWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRA 442
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ ++ +ML+ G PD ++Y +L++SLCR + EA LL M+ P ++ YN V+LG
Sbjct: 443 LTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLG 502
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
C+ R +DA +VL M NGC PN +Y LV G+ G A + + ++S
Sbjct: 503 LCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVS 556
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G + A +M +RG PDV L++GL + +AV ++E +L + PD
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVME-ILEQYGDPD 145
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+ +Y +++ CR + A +++ RMK +G +PD+V YN ++ C G+ A KV++
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ + C P +++Y L+ G D A + + M+S+G P + +++G C G
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265
Query: 391 KVDEA 395
VD A
Sbjct: 266 LVDRA 270
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 1/177 (0%)
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + A+ LE M+ +G+ PD + T L+ L K+ +A +++ ++ G +PD
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPD 145
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
YN V+ GFCR R A +V+ M G P++V+Y L+G LC +G D+A K M
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ +P LI+ G +D+A +L+E++ G P T+ +IV +C
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
LN LC+ K EA L +M +G PD++ ++ G R A +V+E + G
Sbjct: 84 LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y ++ G C FD A + + M +GFSP + LI C GK+D A
Sbjct: 144 -PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
V+++LL+ P T+ +++ ++ +L+E++ ++ D
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPD 250
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL F+ + E C P N + L + + +R A + +GV P+ +YN
Sbjct: 405 DEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIR-ALTMILEMLSNGVDPDRITYNS 463
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ + C +G + A L M P V SY I++ GLC+ ++ A+++L M++ G
Sbjct: 464 LISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNG 523
Query: 267 FVPDTLSYTTLLNSL 281
P+ +YT L+ +
Sbjct: 524 CQPNETTYTLLVEGV 538
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 139/286 (48%), Gaps = 31/286 (10%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + +HG +P+ Y ++ A C G ++ A TL N+M G DV ++ +++
Sbjct: 178 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 237
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR-------- 296
G+C +V A L++ M+ KG +P ++Y LL LCR ++ EA +L R
Sbjct: 238 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 297
Query: 297 -----------------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
M +KGC PD Y+ ++ G C+ GR A ++L +M
Sbjct: 298 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 357
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+V+Y ++ C GM+D + ++ M +KG + + + +I C G++D
Sbjct: 358 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 417
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EA G+++E+ G P ++ I+ +C E+ME+ + +++
Sbjct: 418 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 463
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 126/241 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L+++ G P+ +Y+I+M C G I A L +M ++G P+V +Y I
Sbjct: 311 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 370
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C+ + LLE+M KG ++ Y ++ +LC+ ++ EA L+ M+ +G
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CNPDI YNT++ C + +A + E++ G + N ++Y T++ L G + A
Sbjct: 431 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 490
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI G S + LIK C G VD + +LEE+ + G P+ ++ +++ ++
Sbjct: 491 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550
Query: 422 C 422
C
Sbjct: 551 C 551
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ N++ YN M+ A C +G + A L +M +G PD+ SY ++ LC
Sbjct: 387 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
Q+ A + E++L +G V + ++Y T++++L R + ++A +L M + GC+ D+V
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C++G + +LE+M G PN VSY L+ LC + A + + M
Sbjct: 507 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 566
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+++G +P + LI G C +G + A +LE+L P T+ +++ C +
Sbjct: 567 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 626
Query: 428 EKLGEVLNE-IVKVEIKGDTRIVE 450
+ +LN + V GD RI++
Sbjct: 627 DDAAMLLNRAMAAVCPVGDRRIMQ 650
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 15/261 (5%)
Query: 186 FDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L++ H+ V P T ++ + RA C G A L M G +PD Y+ ++
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 202
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC + V A LL +ML G D ++ ++ +C ++REA +L+ RM KGC P
Sbjct: 203 ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMP 262
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ Y ++ G CR +A +A +L +P N+V + T++GG +G A +
Sbjct: 263 GVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELY 318
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M KG P L+ G C +G++ A +L E+ K G AP+ T+ +++ C
Sbjct: 319 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 378
Query: 425 ----------EEMEKLGEVLN 435
EEM G LN
Sbjct: 379 GMWDDTRALLEEMSAKGLTLN 399
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 24/318 (7%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I++ + + +L + ++ + + +I + D A+ + M
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I+ L + + A +F++ + GV+ N +YN ++ A +G
Sbjct: 427 RSQGCNPDICSYNTIIYHLCNNEQ-MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 485
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L +M G DV SY L++ +C+ V+R++ LLE+M KG P+ +SY
Sbjct: 486 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 545
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ LC+++++R+A +L +M +G PDIV YNT++ G C+ G A +LE + +
Sbjct: 546 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 605
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVA----------------KKYMQLMISKGF-------S 373
P++++Y L+ C + D A ++ MQ++ K F
Sbjct: 606 VHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKG 665
Query: 374 PHFSVSHALIKGFCNVGK 391
F S +K C GK
Sbjct: 666 DDFQHSLGCVKPSCPAGK 683
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%)
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P + CR GRA +A +L M +GC+P+ V Y+T++ LCDQG A
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ G + + +++G C +G+V EA +++ ++ G P T+ ++ +C
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 424 GEEMEKLGEVLNEIVKVEI 442
+ ++ +L + ++ +
Sbjct: 277 VRQADEARAMLGRVPELNV 295
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 4/350 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+ +E+ + PN +++ T + K+GR + D ++T K E P ++ L
Sbjct: 207 IMREMRERGGIAPN-QYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKP-EAVMYNAL 263
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I Y + D AL M+E N ++ L A++L + G
Sbjct: 264 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE-AYELVEEMGGKG 322
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ + +YNI++ C G++ A +F M RGV V +Y L+ L +K QV
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L ++ + +G PD + Y L+NS + A++++ M+ K PD V YNT++ G
Sbjct: 383 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 442
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C GR +A K++++M G P+LV+Y TL+ G +G A + M++KGF+P
Sbjct: 443 CLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 502
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ALI+G C G+ D+A +++E+++ G P + T++ ++ + +E
Sbjct: 503 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 5/333 (1%)
Query: 116 DILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRIL 172
DI+ ++ E + P+ +TY +I + + D A+K F ML + KP N ++
Sbjct: 206 DIMREMR-ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 264
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A + GV +YN+++ A +G + AY L +M +G+
Sbjct: 265 GGYC-DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 323
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
DV +Y IL+ G C++ V +A+++ E+M +G ++YT+L+ +L +K +++E K
Sbjct: 324 ALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDK 383
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L +G PD+V YN ++ G A +++ +M P+ V+Y TL+ GLC
Sbjct: 384 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 443
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G D A+K + M +G P + LI G+ G V +A + E++ G P
Sbjct: 444 LLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 503
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C + + ++ E+V+ I D
Sbjct: 504 TYNALIQGLCKNGQGDDAENMVKEMVENGITPD 536
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 6/272 (2%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
PAF LF + + T ++NIM+R C G + A L +M P+ +Y ++
Sbjct: 137 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 192
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG- 301
G C + +V A+D++ +M +G + P+ +Y T+++ C+ ++ EA K+ M KG
Sbjct: 193 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 252
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V YN ++ G+C +G+ A + M G + +Y LV L G A
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 312
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M KG + + LI G C G V +A + E + + G T+ ++ +
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 372
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++++ ++ +E V+ I+ D + A I
Sbjct: 373 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 404
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ F ML P Q N+IL+ ++Y A L G+ P+ + NI
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY-STAVSLSHRLELKGIQPDLITLNI 99
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC G I+ +++ K+ +RG PD + L++GLC K QV +A+ + +L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F + +SY TL+N +C+ R A K L ++ + PD+V YNT++ C+ +A
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ +M G ++V+Y TL+ G C G A + M+ K +P+ + L+
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C GKV EA VL +LKA P T+ ++ E++K V N +
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 130/242 (53%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y+ +M + ++ A +FN M GV PDV +Y IL+ G C+ V+ A+
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L ++M K VP ++Y++L++ LC+ ++ + L+ M+ +G D++ Y++++ G
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G A + M PN+ ++ L+ GLC G A++ Q +++KG+ +
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ +I G C G ++EA +L ++ G P+ T+ I+ + +E +K ++L +
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539
Query: 437 IV 438
++
Sbjct: 540 MI 541
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 1/290 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R + KP N I++ + ++ + A+ LF G+ + +YN ++
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQ-LVSEAYGLFSEMAVKGISADVVTYNTLI 241
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A L N+M + + P+V +Y IL+ LC++ +V A +L ML
Sbjct: 242 YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++Y+TL++ ++++A + M + G PD+ Y ++ GFC+ +A +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
++M +P +V+Y +L+ GLC G + M +G +LI G C
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G +D A + ++ P+ T+ +++ +C G ++ EV +++
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 109/188 (57%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LFK H+ ++P +Y+ ++ C +G IS + L ++M +RG DV +Y L+
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLID 417
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++RA+ L M ++ P+ ++T LL+ LC+ +L++A ++ + KG +
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL 477
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ YN ++ G C++G +A +L M NGC+PN ++ T++ L + D A+K +
Sbjct: 478 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 537
Query: 365 QLMISKGF 372
+ MI++G
Sbjct: 538 RQMIARGL 545
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 3/263 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A L + PN +YNI++ A C G + A ++ M + V PDV +Y
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G +V +A + M G PD +YT L+N C+ K + EA L M K
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P IV Y++++ G C+ GR ++++M G ++++Y +L+ GLC G D A
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M + P+ L+ G C G++ +A V ++LL G + T+ +++
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489
Query: 422 CAGEEMEKLGEVLNEIVKVEIKG 444
C +E E L + K+E G
Sbjct: 490 CKQGLLE---EALTMLSKMEDNG 509
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 119/225 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +F + GV P+ +Y I++ FC N + A LF +M ++ ++P + +Y
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ +++ DL+++M ++G D ++Y++L++ LC+ L A L +MK +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+I + ++ G C+ GR DA +V +D+ + G N+ +Y ++ G C QG+ + A
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M G P+ +I + D+A +L +++ G
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 188/430 (43%), Gaps = 25/430 (5%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLA-KEIFDYASRQPNF 91
+SS Q S S Q SI N + R+ L + P++ +I D ++ ++
Sbjct: 18 FSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRM--LCMRHTPPIIQFNKILDSFAKMKHY 75
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA-L 150
+ S L LK + +L +ILI +T F+ L KI PD L
Sbjct: 76 STAVSLSHRLELKGIQPDLITL--NILINCFCHMGQITFG-FSVLAKILKRGYPPDTVTL 132
Query: 151 KTF----------RSMLEFNCKPLPK--QLNRI----LELLVTHRNYLRPAFDLFKSAHK 194
T + L F+ K L + QLN++ L V R A +
Sbjct: 133 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDG 192
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
P+ YN ++ A C +S AY LF++M +G+ DV +Y L+ G C ++
Sbjct: 193 RLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKE 252
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC-NPDIVHYNTVV 313
A+ LL +M+ K P+ +Y L+++LC++ K++EA +L M +K C PD++ Y+T++
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLM 311
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+ A V M G P++ +Y L+ G C M D A + M K
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P +LI G C G++ +++E+ G+ T+ ++ +C +++ +
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431
Query: 434 LNEIVKVEIK 443
N++ EI+
Sbjct: 432 FNKMKDQEIR 441
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 110/213 (51%), Gaps = 3/213 (1%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP + TY I I + ++ + D AL F+ M + N P + +++ L +
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK-SGRISYV 393
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+DL G + +Y+ ++ C NG + A LFNKM ++ + P++ ++ IL+ G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A ++ +D+L KG+ + +Y ++N C++ L EA +L +M+ GC P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ T+++ ++ A K+L M + G L
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
V+ AV ML P + + +L+S + K A L R+++KG PD++ N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FC G+ VL + G P+ V+ TL+ GLC +G A + ++++
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 371 GFSPHFSVSHA-LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
GF + VS+A LI G C +G A L ++ P + I+ +C + + +
Sbjct: 159 GFQLN-QVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 430 LGEVLNEIVKVEIKGDT 446
+ +E+ I D
Sbjct: 218 AYGLFSEMAVKGISADV 234
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 125/232 (53%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G+ P++ +N++++A+ G + A +FN+M E+GV PDV +Y ++ L
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR +++ AV+ M+++G P +Y L+ C L +A L+ +M KG PDI
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+N ++ C+ GR +DA + + S G PN++ Y TL+ G C G + A + +
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P+ V L+ G+C VG++DE + E+L G P + +I+
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIIL 608
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 128/241 (53%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
LPN +YN ++ F GD++ A LFN+M +RG+ PD+ +Y ++ LC+ +++A
Sbjct: 213 LPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEA 272
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+L M++KG +PD +Y +L+ + +EA ++ +M +G PD+V N+++ C
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC 332
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ G+ DA V + M G ++ SY+ ++ G +G + LM+S G +P
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + LIK + G +D A + E+ + G P T+ ++ +C +M+ E N++
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 438 V 438
+
Sbjct: 453 I 453
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 189/427 (44%), Gaps = 58/427 (13%)
Query: 28 SLIFCYSSSSQESPSSPEQQQESS------ISNSKSPIGSPCRVQKLIASQSDPLLAKEI 81
SLI+ YSS+ Q + ++ +S + S + S C+ K+ A+++
Sbjct: 291 SLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKD-------ARDV 343
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLID--DILITLKSEHYPVTPSLFTYLIKI 139
FD + + + I+ G A L+D ++ + S+ +F LIK
Sbjct: 344 FDSMAMKG---QKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKA 400
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YA+ + DRA F M E GV P
Sbjct: 401 YAKCGMLDRATIIFNEMRE------------------------------------QGVEP 424
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+ +Y+ ++ A C G + A FN+M ++GV P + +Y L+QG C + +A DL+
Sbjct: 425 DVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLV 484
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
M+NKG PD + ++N+LC+ ++ +A + G +P+++ YNT++ G+C
Sbjct: 485 LQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLV 544
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ +A +V + M S G PN+V Y TLV G C G D + ++ KG P ++
Sbjct: 545 GKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLY 604
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI----CAGEEMEKLGEVLN 435
+ ++ G G+ A E+ ++G A T+ +++ + C+ E + E+
Sbjct: 605 NIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHA 664
Query: 436 EIVKVEI 442
VK++I
Sbjct: 665 MNVKIDI 671
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 5/355 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
STY ++ L +A+ + IL + + V P +TY LI Y+ + A++
Sbjct: 252 STYNCVVNALCKARAMDKAEAILRQMVDK--GVLPDNWTYNSLIYGYSSTGQWKEAVRVS 309
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ M P LN ++ L H ++ A D+F S G + SY IM+ +
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKH-GKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYAT 368
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + LFN M G+ PD + +L++ + ++RA + +M +G PD ++
Sbjct: 369 KGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVT 428
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+T++ +LCR K+ +A + +M +G P I Y+ ++ GFC G + A ++ M
Sbjct: 429 YSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMM 488
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G P++ + ++ LC G A+ IS G P+ V + L+ G+C VGK++
Sbjct: 489 NKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME 548
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
A V + ++ AG P+ + +V C +++ + EI+ IK T +
Sbjct: 549 NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTL 603
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 161/349 (46%), Gaps = 6/349 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI--KIYAESNLPDRALKTFRSMLE 158
L+ L AK + DIL+ + H P +F+Y I K +A + R M E
Sbjct: 149 LLRGLCEAKRTAEALDILLH-RMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207
Query: 159 FNCKPLPKQL--NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LP + N +++ + + A DLF + G+ P+ +YN ++ A C
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGD-VNKACDLFNEMVQRGISPDLSTYNCVVNALCKARA 266
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A + +M ++GV+PD +Y L+ G Q AV + + M ++G +PD ++ +
Sbjct: 267 MDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNS 326
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ SLC+ K+++A + M +KG DI Y ++ G+ +G +D ++ M S+G
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ + L+ GM D A M +G P +I C +GK+D+A
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++ G AP T+ ++ C ++ K +++ +++ ++ D
Sbjct: 447 EKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 218 SIAYTLFNKMFE----RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
++A LFN++ R + P + +Y ILM R + + +L G DT+
Sbjct: 86 ALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIM 145
Query: 274 YTTLLNSLCRKKKLREAYK-LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ LL LC K+ EA LL RM GC PD+ Y V+ C + ++ A ++L M
Sbjct: 146 ISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMM 205
Query: 333 PSNG--CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
G CLPN V+Y T++ G +G + A M+ +G SP S + ++ C
Sbjct: 206 AEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKAR 265
Query: 391 KVDEACGVLEELLKAGEAPHEDTW 414
+D+A +L +++ G P D W
Sbjct: 266 AMDKAEAILRQMVDKGVLP--DNW 287
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 148/279 (53%), Gaps = 7/279 (2%)
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN +L L + N LR F F + G PN +YN +++ C IS A LF +M
Sbjct: 107 LNILLNCLC-NVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK------GFVPDTLSYTTLLNSL 281
+ G PDV +Y L++GLC +N A+ L ++MLN P+ ++Y +++ L
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGL 225
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ + EA +L MK +G P I+ YN+++ GFC G+ ++ ++L++M G P++
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDM 285
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V++ L+ LC +G AKK + +MI G P ++LI+GFC VG ++ A +
Sbjct: 286 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+ G P ++ +++ ++E+ ++ NE++ V
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 171/369 (46%), Gaps = 47/369 (12%)
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML------EFNCKPLPKQLNRIL 172
L+ + TP + TY LIK + + ALK + ML E NCKP N I+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A LF+ G++P+ SYN ++ FC G + L ++M ++G+
Sbjct: 223 DGLCK-VGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGL 281
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD+ ++ +L+ LC++ +V A LL M+ G VPD ++Y +L+ C L A +
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 341
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L M KGC PD++ YN ++ G+ + + +A K+ +M G PN+++Y +L+ G+
Sbjct: 342 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 401
Query: 353 DQGMFDVAKKYMQLMISKGF-------------------------------SPHFSVS-- 379
G D AKK +M + G S +F +
Sbjct: 402 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 461
Query: 380 --HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ LI G C GK++ A + E+L G P+ T+ +++ C +++K VL I
Sbjct: 462 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK-ANVL--I 518
Query: 438 VKVEIKGDT 446
K+E G T
Sbjct: 519 QKMEANGCT 527
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 13/327 (3%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P++ TY LIK + A + F M + C P +++ L N + A
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGN-INIAL 194
Query: 187 DLFK------SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L + S ++ PN +YNI++ C G A LF +M +G++P + SY
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYN 254
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ G C + + LL++ML++G PD +++ L+++LC++ K+ EA KLL M
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+V YN+++ GFC G A ++ MPS GC P+++SY L+ G + A
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K M+ G P+ +L+KG GKVD+A + + G A + T+ + +
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 434
Query: 421 ICAG----EEMEKLGEVLNEIVKVEIK 443
+C E M+ E+ + K+EI+
Sbjct: 435 LCKNDCLFEAMKLFTELKSSNFKLEIE 461
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 6/230 (2%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ S+N ++ S ++L+N+M G+ D + IL+ LC +++
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+L +G+ P+ ++Y TL+ LC + ++ EA +L RM+ GC PD+V Y T++ G C
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 319 EGRAIDACKVLEDMPSN------GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
G A K+ ++M ++ C PN+++Y +V GLC G D AK+ + M ++G
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P ++LI GFC GK +E+ +L+E+L G P T+ +++ +C
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLC 296
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 8/242 (3%)
Query: 212 CFNGDISIAYTL--FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C G+++ + L F+ M P + S+ L+ GL + ++ L M G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + LLN LC +LRE + + +G +P+IV YNT++ G C E R +A ++
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK------GFSPHFSVSHALI 383
M GC P++V+Y TL+ GLC G ++A K Q M++ P+ + ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G C VG+ DEA + EE+ G P ++ ++ C + E+ +L+E++ ++
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282
Query: 444 GD 445
D
Sbjct: 283 PD 284
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 121/248 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF S G P+ SYN+++ + + A L+N+M G P+V +Y
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++G+ +V+ A L M G ++ +Y L+ LC+ L EA KL +K
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+I + N ++ G C+ G+ A ++ E + + G PN+V+Y ++ G C +G D A
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 515
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Q M + G +P + L++GF K++E +L + + +P T ++V +
Sbjct: 516 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 575
Query: 422 CAGEEMEK 429
E+ ++
Sbjct: 576 SKDEKYQE 583
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A+K F + N K + LN +++ L L A++LF+ G PN +Y IM
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDGLCK-AGKLETAWELFEKLSNEGHEPNVVTYTIM 501
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ FC G + A L KM G PD+ +Y LM+G +++ V LL M K
Sbjct: 502 IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 561
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
PD ++ + +++ L + +K +E LL R ++
Sbjct: 562 SPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQ 594
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 81 IFDYASRQPNFR----HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+F +++ P R H+++ L+L L + + D L ++ P + S F L
Sbjct: 87 LFLFSALSPRLRSRPLHAHAVSLLLRLS---SHADEAMFDALADARAAGLPASSSAFAAL 143
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ ++ + A++ F M EF +P AF
Sbjct: 144 VAAHSSAGRHADAVQAFSRMDEFQSRP--------------------TAF---------- 173
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
YN +++A +G I +A L+N+M G P+ +Y +LM GLC++ A+
Sbjct: 174 ------VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ ++ML++G +P+ YT LL+SLC K+ EA +LL MK KGC PD V YN + G
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ GR +A + L + G L Y L+ GL FD Y + M+ + SP
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ +I+G G++++A L+ + K G P + ++ +C ++E+ + +E
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 437 IVKVEIKGDT 446
+++ + D+
Sbjct: 408 MLQNNLVLDS 417
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 154/352 (43%), Gaps = 7/352 (1%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
++S +D + + D +R S+S + L+ A + D + + + +
Sbjct: 113 LSSHADEAMFDALAD--ARAAGLPASSSAFAALVAAHSSAGRHA--DAVQAFSRMDEFQS 168
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+ F Y ++K +S + AL + M+ C P N +++ L + A
Sbjct: 169 RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLC-KQGMAGDAL 227
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F G++PN K Y +++ + C G I A L M ++G +PD +Y + GL
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +VN A L + + GF Y+ L++ L + ++ E + M + +PD+
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ G GR DA L+ M G +P+ Y T++ LCD G + A
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+ + +I G C G VDEA + +E+ + G P T+ ++
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 157/332 (47%), Gaps = 19/332 (5%)
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
L+ L+ + + ++ LI ++ D +++MLE N P L I+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP-DVVLYTIMIRGCA 358
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ A K G +P+T YN +++ C +GD+ A+TL ++M + ++ D
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ I++ GLC++ V+ A+ + ++M G P ++Y L++ R+ +L EA L +M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 298 KVKGCNP--------------DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ G NP D +V C+ G+ + A K+L + +G +P++V+
Sbjct: 479 EM-GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ GLC D A + + + KG SP LI G + ++A + + +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++G +P + ++ +C M+KL + +N
Sbjct: 598 QSGSSPSLSIYNSMMRSLC---RMKKLSQAIN 626
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 33/309 (10%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-----------LLVTHRNYL 182
T +I + L D A++ F M E C P N +++ ++ H+ +
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 183 RPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LF + + +++S ++ C +G + AY L + + GV+PDV +Y
Sbjct: 481 GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ AV L +++ KG PD ++Y TL++ L R + +A L + G
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLED-MPSNGCLPN-----LVSYRTLVGGLCDQG 355
+P + YN+++ CR + A + D +P P +++ + G D G
Sbjct: 601 SSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDG 660
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHAL-IKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ ++ K I + + S + + + G C V + D+A + L + G
Sbjct: 661 VRELIK------IDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFG-------- 706
Query: 415 VMIVPQICA 423
+ I P CA
Sbjct: 707 IDITPACCA 715
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 160/318 (50%), Gaps = 6/318 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +FT+ LI + N + A+ M+E KP I++ L + ++ A
Sbjct: 139 PDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKN-GHVDNALS 197
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF +G+ P+ Y ++ C +G A L M +R + PDV ++ L+
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +L +M+ P+ +YT+L+N LC + +L EA ++ M+ KGC PD+V
Sbjct: 258 KEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVV 317
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +++ GFC+ + DA K+ +M G N ++Y TL+ G G +VA++ M
Sbjct: 318 AYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHM 377
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK---AGEAPHEDTWVMIVPQICAG 424
+S+G P+ + L+ C GKV++A + E++ K G P+ T+ +++ +C
Sbjct: 378 VSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437
Query: 425 EEMEKLGEVLNEIVKVEI 442
++EK V ++ K ++
Sbjct: 438 GKLEKALMVFGDMQKRDM 455
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G P+ ++ ++ FC I A ++ N+M E G+ PDV Y ++ LC+ V+
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ L M N G PD + YT+L+N LC + R+A LL M + PD++ +N ++
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
F +EG+ +DA ++ +M PN+ +Y +L+ GLC +G D A++ LM +KG
Sbjct: 254 DAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF 313
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P +LI GFC KV++A + E+ + G + T+ ++
Sbjct: 314 PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLI 358
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 132/265 (49%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A + + G+ P+ Y ++ + C NG + A +LFN+M G+ PDV Y
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ GLC + A LL M+ + PD +++ L+++ ++ KL +A +L M
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
P+I Y +++ G C EGR +A ++ M + GC P++V+Y +L+ G C +
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED 334
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K M KG + + LI+GF VGK + A V ++ G P+ T+ +++
Sbjct: 335 AMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH 394
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKG 444
+C ++ K + ++ K EI G
Sbjct: 395 CLCYNGKVNKALMIFEDMQKREIDG 419
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLN--RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ AL F M+E +PLP ++ R+L ++ + + +L K GV + +
Sbjct: 53 NEALDLFSHMVE--SRPLPSIIDFTRLLNVIAKMKKF-DVVINLCKHLQIMGVSNDLYTC 109
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N++M FC + +A + K+ + G PD+ ++ L+ G C +++ A+ ++ M+
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD + YTT+++SLC+ + A L +M+ G PD+V Y ++V G C GR D
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P+++++ L+ +G AK+ MI +P+ +LI
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G++DEA + + G P + ++ C +++E ++ E+ + + G
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349
Query: 445 DT 446
+T
Sbjct: 350 NT 351
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H A DLF + LP+ + ++ + L + GV D+
Sbjct: 48 HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLY 107
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ +LM C+ SQ A L ++ GF PD ++T+L+N C ++ EA ++ +M
Sbjct: 108 TCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQM 167
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD+V Y T++ C+ G +A + M + G P++V Y +LV GLC+ G +
Sbjct: 168 VEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRW 227
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M+ + P +ALI F GK+ +A + E+++ AP+ T+ +
Sbjct: 228 RDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287
Query: 418 VPQICAGEEME-KLGEVLNEIVKVEIKG 444
+ +C ME +L E +E KG
Sbjct: 288 INGLC----MEGRLDEARQMFYLMETKG 311
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 6/300 (2%)
Query: 124 EHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E+Y + P ++T L+ S A R M++ KP N +++ V
Sbjct: 203 ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKL 262
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L+ + + PN +Y ++ C G + A +F M +G PDV +Y
Sbjct: 263 L-DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTS 321
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V A+ + +M KG +T++YTTL+ K A ++ M +G
Sbjct: 322 LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS---NGCLPNLVSYRTLVGGLCDQGMFD 358
P+I YN ++ C G+ A + EDM +G PN+ +Y L+ GLC G +
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A M + +I+G C GKV +A + L G P+ T+ ++
Sbjct: 442 KALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMI 501
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++FTY LI D A + F M C P ++ + + A
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK-VEDA 335
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G+ NT +Y +++ F G ++A +F M RGV P++ +Y +L+
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHC 395
Query: 246 LCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
LC +VN+A+ + EDM + G P+ +Y LL+ LC KL +A + M+ +
Sbjct: 396 LCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDM 455
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ I+ Y ++ G C+ G+ DA + +PS G PN+V+Y T++ GL +G+ A
Sbjct: 456 DIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHV 515
Query: 363 YMQLMISKGFS 373
+ M G S
Sbjct: 516 LFRKMKEDGVS 526
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
Query: 208 MRAFCF------NGDISIAYT----LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+RAFC NG S+ + LF+ M E +P + + L+ + + + + ++
Sbjct: 33 VRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN 92
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L + + G D + L+N C+ + A L ++ G PDI + +++ GFC
Sbjct: 93 LCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC 152
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R +A ++ M G P++V Y T++ LC G D A M + G P
Sbjct: 153 LGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVV 212
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +L+ G CN G+ +A +L ++K P T+ ++ ++ E+ NE+
Sbjct: 213 MYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272
Query: 438 VKVEI 442
+++ I
Sbjct: 273 IQMSI 277
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK---KYMQLMISKGFSPHFSVSH 380
+A + M + LP+++ + L+ + FDV K++Q+M G S +
Sbjct: 54 EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM---GVSNDLYTCN 110
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
L+ FC + A L +L+K G P T+ ++ C G +E+ ++N++V++
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170
Query: 441 EIKGDTRI 448
IK D I
Sbjct: 171 GIKPDVVI 178
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 171/343 (49%), Gaps = 2/343 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY IL+ RA + + + + ++ + ++I+ + A + F S
Sbjct: 233 TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFEST 292
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P N ++ L + + L A LF+ A + GV+ + +Y+ +M AF G
Sbjct: 293 MTKESVPDVFTYNLLIALCKSKQ--LEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGR 350
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A +F M + G MPD Y +L+ L ++ +V+ A++LLEDM KG +PD +Y
Sbjct: 351 AAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 410
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ L + +AY MK + +PD+V YNT++ G + R +AC + ++M +N
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C+P+L ++ TL+ L G + A + ++ G +P+ + +ALI GFC G+VD+
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +++++ P T+ ++V E+L E+V+
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 573
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L++ L ++K L + + + ++E V +FTY L+ + ++ +AL+ F +M +
Sbjct: 306 LLIALCKSK--QLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQK 363
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
C P N ++ L + + A +L + ++ G++P+ ++YNI++ G
Sbjct: 364 AGCMPDTVVYNVLISCL-GKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYE 422
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
AY+ F M R PDV +Y L+ GL + + + A DL ++M +PD ++ TL+
Sbjct: 423 KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLI 482
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
++L + ++ +A + R+ G P+ YN ++ GFCR G+ ++ +DM C
Sbjct: 483 DTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCF 542
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P+ ++Y LV G +G +A + +Q M+ +G +P + + LI+ G+V++A +
Sbjct: 543 PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTL 602
Query: 399 LEELLKAGEAPHEDTW 414
+E++ G P T+
Sbjct: 603 FKEMIAKGFNPDMQTY 618
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
A G + +YN +++ F G ++ A LF + +PDV +Y +L+ LC+ Q
Sbjct: 257 ARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQ 315
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A+ L ++ G V D +Y+ L+++ + + +A ++ M+ GC PD V YN
Sbjct: 316 LEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNV 375
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ ++G+ +A ++LEDM G +P+ +Y ++ L G ++ A + +M +
Sbjct: 376 LISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK 435
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
SP + L+ G + + DEAC + +E+ P T+ ++ + ME
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 495
Query: 432 EVLNEIVKV 440
E +VK+
Sbjct: 496 EQSARLVKM 504
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 147/362 (40%), Gaps = 10/362 (2%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY--PVTPSLFTYLIKIYAESN 144
RQ S T I GRA +L ++ ++ P T + FT + E
Sbjct: 45 RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVA-FTAAMHWLCEVR 103
Query: 145 LPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL-PNTK 202
++A+ F M E +C P N ++ + R A D+F+ + G PN
Sbjct: 104 RVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDR-ALDMFRRLKQEGSCKPNAV 162
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
S++ ++ C + A +F +M G+ DV L+ CR + +A LL M
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
D +Y L+N+ CR ++ E + + GC V+YN ++ GF R GR
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRL 282
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A ++ E + +P++ +Y L+ LC + A Q G L
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYL 341
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ F G+ +A V + KAG P DT V V C G++ K+ E L + +
Sbjct: 342 MDAFGKAGRAAKALEVFYNMQKAGCMP--DTVVYNVLISCLGKQ-GKVDEALELLEDMNR 398
Query: 443 KG 444
KG
Sbjct: 399 KG 400
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +K K G+ + + M++ C G + L ++ ++GV + +Q
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMK-VKGC 302
R ++ A+ +L+DM F PDT+++T ++ LC +++ +A L M+ C
Sbjct: 62 AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121
Query: 303 NPDIVHYNTVVLGFCREG---RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
PD+V YNT++ G+C+ G RA+D + L+ S C PN VS+ TLV LC
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGS--CKPNAVSFDTLVIFLCKMSRATD 179
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A Q M+ G +V + LI C +G + +A +L + A T+ ++V
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
Query: 420 QICAGEEMEKLGEVL 434
C +M ++ +
Sbjct: 240 AHCRAGQMHEVASFM 254
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L T+ LI A++ + AL+ +++ P N ++ + ++
Sbjct: 473 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC-RSGQVDKGYE 531
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ + P++ +Y I++ F G S+A L +M G P + +Y +L++ L
Sbjct: 532 LFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLS 591
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
QV A L ++M+ KGF PD +Y+ L N
Sbjct: 592 MAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS++ LI++Y + +L+ FR M + P N IL +V + +
Sbjct: 123 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFL 181
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K K + P+ ++NI++ C G + L KM + G P + +Y ++ C+K
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A++LL+ M +KG D +Y L++ LCR ++ + Y LL M+ + +P+ V Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
NT++ GF EG+ + A ++L +M S G PN V++ L+ G +G F A K +M +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
KG +P L+ G C + D A G + + G T+ ++ +C +++
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 430 LGEVLNEIVKVEIKGD 445
+LNE+ K I D
Sbjct: 422 AVVLLNEMSKDGIDPD 437
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 13/356 (3%)
Query: 97 TYLILILKLGR----AKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY +LI L R AK + L+ D+ + P+ TY LI ++ A
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDM------RKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ ML F P N +++ ++ N+ + A +F G+ P+ SY +++
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNF-KEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C N + +A + +M GV +Y ++ GLC+ ++ AV LL +M G PD
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+ L+N C+ + + A +++CR+ G +P+ + Y+T++ CR G +A ++ E
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M G + ++ LV LC G A+++M+ M S G P+ LI G+ N G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +A V +E+ K G P T+ ++ +C G + + + L + V DT
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 6/358 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ +L+ L +A + ++ + + S+ F LI Y S +A F M
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +L+ L +LR A KS H +T YN ++ A C +G+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKG-GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYT 275
++ A +LF +M +R ++PD +Y L+ GLCRK + A+ ++ +G V P+ + YT
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++ + + + + +M G PDIV N ++ G+ R G+ +L +M +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVSHALIKGFCNVGKVD 393
PNL +Y L+ G + DV+ ++ + +I G P H+L+ G C ++
Sbjct: 749 NGGPNLTTYNILLHGYSKRK--DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+L+ + G T+ M++ + CA E+ +++ + + I D +A
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 114/242 (47%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A L K G+ P+ +Y+ ++ FC G A + +++ G+ P+ Y
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ CR + A+ + E M+ +G D ++ L+ SLC+ K+ EA + + M
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+ V ++ ++ G+ G + A V ++M G P +Y +L+ GLC G A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+K+++ + + + + + L+ C G + +A + E+++ P T+ ++
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 421 IC 422
+C
Sbjct: 658 LC 659
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N Y+I++R + G I + +F M G P V + ++ + + + L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++ML + PD ++ L+N LC + ++ L+ +M+ G P IV YNTV+ +C++
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKGFSPHFS 377
GR A ++L+ M S G ++ +Y L+ LC +AK Y+ L M + P+
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN--RIAKGYLLLRDMRKRMIHPNEV 299
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKLGEVLNE 436
+ LI GF N GKV A +L E+L G +P+ T+ +I I G E L
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG----NFKEALKM 355
Query: 437 IVKVEIKGDT 446
+E KG T
Sbjct: 356 FYMMEAKGLT 365
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A ++++ G + ++N+++ + C G ++ A M G++P+ S+
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G + +A + ++M G P +Y +LL LC+ LREA K L +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ------- 354
D V YNT++ C+ G A + +M LP+ +Y +L+ GLC +
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 355 ------------------------GMFDVAKK-----YMQLMISKGFSPHFSVSHALIKG 385
GMF + + + M + G +P ++A+I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +GK+++ +L E+ P+ T+ +++
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C + LNR HR + + + K G+ P ++ Y ++ C GDI A
Sbjct: 862 CDAMVSVLNR------NHR--FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + +M + P + +++ L + + + A LL ML VP S+TTL++
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C+ + EA +L M G D+V YN ++ G C +G A ++ E+M +G L N
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 341 LVSYRTLVGG-LCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+Y+ L+ G L + F A ++ ++++GF S+S
Sbjct: 1034 ATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ + D+S ++ L+ + G++PD + L+ G+C + + + +
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ + +G D ++ L++ C ++ A+ L+ M G + D + +V R
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R ++ VL +M G P Y L+ GLC G A + MI+ P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA-GEEMEKL 430
A+++ GK DEA +L +LK P ++ ++ C G +E L
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRPAF 186
P+L TY I ++ S D + +RS++ N LP +L L L + N L
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSII-LN-GILPDKLTCHSLVLGICESNMLEIGL 809
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL----------------------- 223
+ K+ GV + ++N+++ C NG+I+ A+ L
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 224 ------------FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
++M ++G+ P+ Y L+ GLCR + A + E+M+ P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ + ++ +L + K EA LL M P I + T++ C+ G I+A ++
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
M + G +LVSY L+ GLC +G +A + + M GF + + ALI+G
Sbjct: 990 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 45/352 (12%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
K FS+ D++ K H+P + FTY L+K + A K +S+
Sbjct: 561 KAFSVFDEMT---KVGHHP---TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA------ 220
N +L + N L A LF + +LP++ +Y ++ C G IA
Sbjct: 615 MYNTLLTAMCKSGN-LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Query: 221 -------------YTLF-NKMFERGVM----------------PDVESYRILMQGLCRKS 250
YT F + MF+ G PD+ + ++ G R
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ + DLL +M N+ P+ +Y LL+ ++K + ++ L + + G PD + +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++VLG C K+L+ G + ++ L+ C G + A +++M S
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G S A++ + E+ VL E+ K G +P ++ ++ +C
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/144 (18%), Positives = 65/144 (45%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CN + Y+ ++ + REG D+ ++ M G P++ + ++G + G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ M+ + P + + LI C G +++ +++++ K+G AP T+ ++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
C + E+L+ + + D
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDAD 262
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 164/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + ++ +I
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y + + ++K F+ M E GV
Sbjct: 88 DSYGKEGIVQESVKMFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSYN + +A G +A FNKM G+ P ++ +++ G +V A
Sbjct: 112 ERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N R KK+ EA K MK + P +V Y T++ G+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
+ DA +++E+M G PN ++Y TL+ GLC+ G A+ ++ M+ K +P
Sbjct: 232 SVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI CN G +D A VL+ +++ + +++ C + ++ ++L++
Sbjct: 292 SIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + +F KM E GV ++SY L + + R+ +
Sbjct: 73 KKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A ML++G P ++ ++ K+ A + MK + +PD+V YNT++
Sbjct: 133 MAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMI 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+ R + +A K +M P +V+Y TL+ G D A + ++ M G
Sbjct: 193 NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM-IVPQICAGEEMEKLGE 432
P+ L+ G CN GK+ EA +L+E++ AP +++ M ++ C ++ +
Sbjct: 253 PNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAAD 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E++
Sbjct: 313 VLKAMIRLSVP--TEAGHYGVLIENF 336
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 160/323 (49%), Gaps = 4/323 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ V P+++TY L++ + A+ M C P N ++ L
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF-CRAGELD 204
Query: 184 PAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A + + G PN ++N M+ C G + A +F++M G+ PDV SY L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++ ++ + +M +G VPD +++T+L+++ C+ L +A L+ +M+ +G
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ V + ++ GFC++G DA +E+M G P++V Y L+ G C G D+A++
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M +K P +I G+C VG +D A + +++LK G P T+ ++ +C
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
+ + E+ ++++ ++ D
Sbjct: 445 EEKRLNDACELFENMLQLGVQPD 467
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 160/314 (50%), Gaps = 4/314 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPA 185
P+ TY L+ + + D A + M E N KP N ++ L + A
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK-AGRMEGA 242
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G+ P+ SYN ++ +C G + + +F++M +RG++PDV ++ L+
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + +AV L+ M +G + +++T L++ C+K L +A + M+ G P
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+C+ GR A +++ +M + P++V+Y T++ G C G D A + Q
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ KG P +LI+G C ++++AC + E +L+ G P E T+ ++ C
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Query: 426 EMEKLGEVLNEIVK 439
+EK + +E+++
Sbjct: 483 NVEKALSLHDEMIR 496
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI+ YA P A P N +L L L A S
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVL--LALSDASLPSARRFLSSM 143
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+HGV PN +YNI++RA C G + A + M G P+ +Y L+ CR ++
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 253 NRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A ++ M +G P+ +++ +++N LC+ ++ A K+ M +G PD+V YNT
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C+ G ++ V +M G +P++V++ +L+ C G + A + M +G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ ALI GFC G +D+A +EE+ K G P + ++ C M+
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 432 EVLNEIVKVEIKGDT 446
E++ E+ +K D
Sbjct: 384 ELIREMEAKRVKPDV 398
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 157/324 (48%), Gaps = 4/324 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ RA + + ++L E P+L T+ ++ ++ + A K F
Sbjct: 189 TYNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P N +L L + +F + G++P+ ++ ++ A C
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCK-VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A L +M ERG+ + ++ L+ G C+K ++ A+ +E+M G P + Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+N C+ ++ A +L+ M+ K PD+V Y+T++ G+C+ G A ++ + M
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G LP+ ++Y +L+ GLC++ + A + + M+ G P LI G C G V++
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486
Query: 395 ACGVLEELLKAGEAPHEDTWVMIV 418
A + +E+++ G P T+ +++
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLI 510
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 16/301 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + D AL M + +P N ++ + A +L +
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK-LGRMDLARELIREM 389
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
V P+ +Y+ ++ +C G++ A+ L KM ++GV+PD +Y L++GLC + ++
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A +L E+ML G PD +YTTL++ C++ + +A L M KG PD+V Y+ +
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR---------------TLVGGLCDQGMF 357
+ G + R +A ++L + +P+ + Y L+ G C +G+
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A K Q M+ + + SV LI G C G V +A +++L++G +P+ + + +
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 629
Query: 418 V 418
V
Sbjct: 630 V 630
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ +L A + K G+ P+ YN ++ +C G + +A L +M + V PDV +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G C+ ++ A L + ML KG +PD ++Y++L+ LC +K+L +A +L M
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD Y T++ G C+EG A + ++M G LP++V+Y L+ GL
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Query: 359 VAK----------------KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
A KY LM+ + SV AL+KGFC G + EA V + +
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVV-ALLKGFCMKGLMKEADKVYQSM 579
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEK 429
L + +++ C G + K
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRK 606
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + +Y L+ Y + +L F M + P ++ N L A
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN-LEQA 312
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G+ N ++ ++ FC G + A +M + G+ P V Y L+ G
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A +L+ +M K PD ++Y+T+++ C+ L A++L +M KG PD
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y++++ G C E R DAC++ E+M G P+ +Y TL+ G C +G + A
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
MI KG P LI G + EA +L +L HED
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY------HED 533
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 160/376 (42%), Gaps = 57/376 (15%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAES 143
R+ R + T+ LI + + +DD L+ ++ + PS+ Y LI Y +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGF---LDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
D A + R M KP + I+ N L AF L + K GVLP+ +
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN-LDSAFQLNQKMLKKGVLPDAIT 435
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y+ ++R C ++ A LF M + GV PD +Y L+ G C++ V +A+ L ++M+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL--------- 314
KG +PD ++Y+ L+N L + + +EA++LL ++ + PD + Y+ ++L
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555
Query: 315 ------GFCREGRAIDACKVLEDMPS---------------------------------- 334
GFC +G +A KV + M
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Query: 335 -NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+G PN S +LV GL ++GM A +Q +++ S ALI G VD
Sbjct: 616 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVD 675
Query: 394 EACGVLEELLKAGEAP 409
VL + + G P
Sbjct: 676 ALIDVLCGMARDGLLP 691
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 126/241 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF K + PN ++NI++ FC G ++ A + M + + PDV +Y
Sbjct: 252 LNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNS 311
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C ++VN+A D+ + M + G + + YTT++N C+ K + EA L M+ +
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V Y++++ G C+ GR A K++++M G PN+V+Y +++ LC D A
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + +G P LIKG C G++++A V E+LL G + +++
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGF 491
Query: 422 C 422
C
Sbjct: 492 C 492
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 5/312 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI + D+ +K E+ + P+++T+ L+ + + + A
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKEN--INPNVYTFNILVDGFCKEGKVNDAKVVLA 295
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M++ + KP N +++ + N + A D+F S GV+ N + Y M+ FC
Sbjct: 296 IMMKDDIKPDVVTYNSLMDGYCS-INKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A LF +M R ++P+V +Y L+ GLC+ ++ A+ L+++M ++G P+ ++Y
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+++L++LC+ + +A LL +K +G PD+ Y ++ G C+ GR DA V ED+
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G ++ +Y ++ G CD+G FD A + M G P+ +I + D
Sbjct: 475 KGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDT 534
Query: 395 ACGVLEELLKAG 406
A +L E++ G
Sbjct: 535 AEKLLREMIVRG 546
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 7/302 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI +++ L + F +L+ P N +++ L + ++ A
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCL-KGHIHQALHFHDKV 157
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G + SY ++ C G I+ A L ++ + V P+ Y +++ +C+ V
Sbjct: 158 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 217
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A DL M+ K PD +Y L++ KL A L +MK + NP++ +N +
Sbjct: 218 NDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNIL 277
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V GFC+EG+ DA VL M + P++V+Y +L+ G C + AK M S G
Sbjct: 278 VDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGV 337
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + ++ GFC + VDEA + EE+ P+ T+ ++ +C KLG
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLC------KLGR 391
Query: 433 VL 434
+
Sbjct: 392 IF 393
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 129/264 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A L K V PN YN+++ C ++ A+ L+++M + + PDV +Y
Sbjct: 182 ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNA 241
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G S++N A+DL M + P+ ++ L++ C++ K+ +A +L M
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V YN+++ G+C + A + + M S G + N+ Y T+V G C M D A
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M + P+ +LI G C +G++ A +++E+ G+ P+ T+ I+ +
Sbjct: 362 NLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGD 445
C ++K +L + I+ D
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPD 445
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 161/324 (49%), Gaps = 5/324 (1%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRP 184
+P + LF+ +++ + + + + +F +L N P Q N+IL LV +++
Sbjct: 24 FPSSIRLFS---QLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHH-ST 79
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + +G+ + ++NI++ F G S+++++F K+ ++G P ++ L++
Sbjct: 80 ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIK 139
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC K +++A+ + ++ +GF D +SY TL+N LC+ ++ A +LL R+ K P
Sbjct: 140 GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 199
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V YN ++ C+ DA + M + P++ +Y L+ G + A
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M + +P+ + L+ GFC GKV++A VL ++K P T+ ++ C+
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
++ K ++ + + + + +I
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQI 343
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
I K+ +AK DI ++ S ++T ++ + + + D A+ F M C
Sbjct: 319 INKVNKAK------DIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM---RC 369
Query: 162 KPLPKQLNRILELLVTHRNYLRP---------AFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+ +I+ +VT+ + + A L H G PN +Y+ ++ A C
Sbjct: 370 R-------KIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
N + A L + ++G+ PD+ +Y IL++GLC+ ++ A ++ ED+L KG+ D
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT ++ C K +A LL +M+ GC P+ Y V+L + A K+L +M
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542
Query: 333 PSNGCL 338
G L
Sbjct: 543 IVRGLL 548
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLN 169
F +DD L ++ T + L+ YA++ + +A + E + P N
Sbjct: 324 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 383
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
R+L+LLV R + A L+ + S +++R C G + L +
Sbjct: 384 RLLKLLVEQRRW-DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 442
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G +P V Y +L+ G CR+ + R + LL +M KGF+P ++Y +L+N L +K L +
Sbjct: 443 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 502
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
L M+ +G +P++ YN+V+ C+ A A +L+ M ++GC P+++++ TL+
Sbjct: 503 IGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLIT 562
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC +G A+ +++ I + +P+ LI GFC G++ A +L E++ G P
Sbjct: 563 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 622
Query: 410 HEDTW-VMIVPQICAGEEMEKL 430
T+ +I + AG+ E L
Sbjct: 623 DVVTFGALIHGLVVAGKVSEAL 644
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF K G+ PN + YN ++ A C + A + +MF G PD+ ++ L+ GLC
Sbjct: 506 LFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLC 565
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ V +A L + + + P+ LSYT L++ C + +L A LL M +G PD+V
Sbjct: 566 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 625
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ ++ G G+ +A V E M P++ Y L+ GLC + M AK ++ M
Sbjct: 626 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEM 685
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ K P V LI GF + +A + E + G P
Sbjct: 686 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 727
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQG 245
D +S G P ++ A+ G + A + ++ E+ G +P+V L++
Sbjct: 329 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 388
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + + A L ++ML + D S L+ LC + ++ E KL+ GC P
Sbjct: 389 LVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPH 448
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+CR G +L +M + G LP LV+Y +L+ L +G +
Sbjct: 449 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 508
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G SP+ + +++I C +A +L+++ +G P T+ ++ +C
Sbjct: 509 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 568
Query: 426 EMEKLGEVLNEIVKVEI 442
+ K L E ++ E+
Sbjct: 569 HVRKAEHFLREAIRREL 585
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLG 315
D L+ M G P L+ + L +A + R++ + G P++ H N ++
Sbjct: 329 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 388
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ R DA K+ ++M + S LV GLC +G + K ++ G PH
Sbjct: 389 LVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPH 448
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+C G + +L E+ G P T+ ++ + ++EK+G +
Sbjct: 449 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 508
Query: 436 EIVKVEIKGDTRI 448
E+ K + + +I
Sbjct: 509 EMRKRGLSPNVQI 521
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 157/351 (44%), Gaps = 40/351 (11%)
Query: 129 TPSLFTYLIKIYAE--SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++ TY I I A D A+K M E N +P N I+ + Y+ AF
Sbjct: 156 NPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXM--CREGYVDRAF 213
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ S G + +YNI++R+ G + L + M +G +V +Y +L+ L
Sbjct: 214 EVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSL 273
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR +V V LL+DM KG PD Y L+ LC++ ++ A ++L M GC PDI
Sbjct: 274 CRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDI 333
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN-------------------------- 340
V+YNT++ C++ RA +A + E + GC PN
Sbjct: 334 VNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILE 393
Query: 341 --------LVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVSHALIKGFCNVG 390
+++Y +L+ LC GM D A + + M S P + ++ G C VG
Sbjct: 394 MLDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVG 453
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
+V +A VL ++ G P+E T+ ++ I G + ++ +V ++
Sbjct: 454 RVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMD 504
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 48/349 (13%)
Query: 88 QPNFRHSNSTYLILI----LKLGRAKYFSLIDDIL-ITLKSEHYPVTPSLFTYLIKIYAE 142
+ NF + TY ILI L+ G + L+D++ I L+ + +P + +I + E
Sbjct: 152 KENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFP-----YNSIIXMCRE 206
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ DRA + S+ N +L L + F+L G N
Sbjct: 207 GYV-DRAFEVISSISSKGYALDVITYNILLRSLXNQGKW-EAGFELMSDMVAKGCEANVV 264
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y++++ + C +G + L M ++G+ PD Y L+ LC++ +V+ A+++L+ M
Sbjct: 265 TYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVM 324
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC-------------------- 302
++ G VPD ++Y T+L LC++K+ EA + ++ GC
Sbjct: 325 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHK 384
Query: 303 --------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMP--SNGCLPNLVSYRT 346
+PD++ YN+++ CR+G +A ++L DM S+ C P++VSY
Sbjct: 385 VRALGMILEMLDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 444
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
++ GLC G A + + M+ KG P+ + LI+G G +++A
Sbjct: 445 VLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDA 493
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 8/256 (3%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + G P+ +YNI++ + C G + A N++ + P V +Y IL++
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ ++ A+ LL++M PD Y +++ +CR+ + A++++ + KG
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISSKGYAL 226
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YN ++ +G+ +++ DM + GC N+V+Y L+ LC G + +
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLL 286
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-- 422
+ M KG P LI C G+VD A VL+ ++ G P + I+ +C
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346
Query: 423 --AGEEM---EKLGEV 433
A E + EKLGEV
Sbjct: 347 KRADEALSIFEKLGEV 362
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ G +P+ +YN ++ C A ++F K+ E G P+ SY +
Sbjct: 317 AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFS 376
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--C 302
L RA+ ++ +ML+ PD ++Y +L++ LCR + EA +LL M+++ C
Sbjct: 377 ALGSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSEC 435
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P +V YN V+LG CR GR DA +VL M GCLPN +Y L+ G+ G + A+
Sbjct: 436 KPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARD 495
Query: 363 YMQLMISKGFSPHFSVSHALIKGFC 387
+++ S L K FC
Sbjct: 496 LATTLVNMDAISEHSFER-LYKTFC 519
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 36/223 (16%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR---------------------- 288
+ A +L+ M NKGF PD ++Y L+ SLC + L
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163
Query: 289 -------------EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
EA KLL M PD+ YN+++ CREG A +V+ + S
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G ++++Y L+ L +QG ++ + M M++KG + LI C GKV+E
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G+L+++ K G P + ++ +C ++ EVL+ ++
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMI 325
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
+ + AY++L RMK KG +PDIV YN ++ C G A + + P +V+Y
Sbjct: 103 ESIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTY 162
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ QG D A K + M P +++I C G VD A V+ +
Sbjct: 163 TILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISS 221
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G A T+ +++ + + E E+++++V
Sbjct: 222 KGYALDVITYNILLRSLXNQGKWEAGFELMSDMV 255
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 201/465 (43%), Gaps = 43/465 (9%)
Query: 24 PKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFD 83
P TP L + + + + Q+ I S++ + DP L F+
Sbjct: 23 PSTPHLKYLVKDTIRIIKTETLWQEALEIRFSETDTRVSEIAHFVFDQIHDPRLGLNFFE 82
Query: 84 YASRQPNFRHSNSTYLI--LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
+AS+Q +S ++ L+ L R + F I+++L T+KS+ T +++I YA
Sbjct: 83 WASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYA 142
Query: 142 ESNLPDRALKTFRSMLEF-NCKPLPKQLNRILELLVTHRNY--LRPAFDLFKSAHKHGVL 198
S L AL+ + ++++ NC P N +L LLV H R +D + ++G +
Sbjct: 143 GSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYD--EMVDRNGDV 200
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
N + I+ + C G + L K + +G +P++ Y L+ G C+ + RA L
Sbjct: 201 DNY-TVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLL 259
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG----------------- 301
+++ KGF+P +Y ++N+ C+K K KLL MK +G
Sbjct: 260 FKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFK 319
Query: 302 ------------------CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
C PD+ YNT++ G C +G+ +A ++LE G PN S
Sbjct: 320 HGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFS 379
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y L+ G + A + + M +G + AL+ G G+VD A V ++++
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ G P + + +++ +C ++L E++ + D +
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFV 484
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 36/368 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I + F +D +L+ +K V+ +F +I + A R M
Sbjct: 274 TYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWM 333
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E C+P N ++ + + +R A +L + A + G+ PN SY ++ AF NG+
Sbjct: 334 IESGCEPDMATYNTLINGSCS-KGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGE 392
Query: 217 -----------------------------------ISIAYTLFNKMFERGVMPDVESYRI 241
+ +A T+ +KM ERG++PD Y +
Sbjct: 393 YVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNV 452
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM GLC+K + A LL +ML++ PD TL++ R L EA KL +G
Sbjct: 453 LMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ +V N ++ G+C+ G DA + M + P+ +Y T++ G Q A
Sbjct: 513 IDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGAL 572
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ LM+ K P+ +LI GFC G ++ A V EE+ G P+ T+ +++
Sbjct: 573 RMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYF 632
Query: 422 CAGEEMEK 429
C ++ K
Sbjct: 633 CKEGKLTK 640
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGD---------------ISIAYTLFNK------ 226
LFK G LP K+Y M+ AFC G ++++ +FN
Sbjct: 259 LFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARF 318
Query: 227 --------------MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
M E G PD+ +Y L+ G C K +V A +LLE + +G P+
Sbjct: 319 KHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKF 378
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SYT L+++ + + A +LL M +G D++ Y +V G G A V + M
Sbjct: 379 SYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKM 438
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G LP+ Y L+ GLC +G F AK+ + M+ + +P V+ L+ GF G +
Sbjct: 439 MERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNL 498
Query: 393 DEACGVLEELLKAG 406
DEA + + ++ G
Sbjct: 499 DEAKKLFQLTIERG 512
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 12/290 (4%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
ML+ N P +++ + H N L A LF+ + G+ + N M++ +C G
Sbjct: 473 MLDQNVTPDAFVNATLVDGFIRHGN-LDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
++ A F +MF PD +Y ++ G +++ + A+ + ML K P+ +++T
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+L+N CR L A K+ M+ G P++V Y ++ FC+EG+ AC E M N
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN 651
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKK-----------YMQLMISKGFSPHFSVSHALIK 384
C+PN ++ LV GL + ++ K + +MIS G+ + ++++
Sbjct: 652 KCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILL 711
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
C V A + ++++ G P +++ ++ +C ++ V+
Sbjct: 712 CLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVI 761
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 2/311 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+E+ ++A R+ F + S Y LI + + ++LI + + + + L+
Sbjct: 361 AEELLEHAIRRGLFPNKFS-YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALV 419
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ D AL M+E P N ++ L + A L V
Sbjct: 420 HGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCK-KGRFPAAKQLLVEMLDQNV 478
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+ ++ F +G++ A LF ERG+ V +++G C+ +N A+
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL 538
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ M N PD +Y+T+++ ++ LR A ++ M K C P++V + +++ GFC
Sbjct: 539 CFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R G A KV E+M S G PN+V+Y L+G C +G A + + M+ P+ +
Sbjct: 599 RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDA 658
Query: 378 VSHALIKGFCN 388
+ L+ G N
Sbjct: 659 TFNYLVNGLTN 669
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 16/279 (5%)
Query: 106 GRAKYFSLIDDILITLKSEHYPV-TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCK 162
G KY +++D L+ K V +P FTY +I Y + N AL+ F ML+ CK
Sbjct: 526 GYCKY-GMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCK 584
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P ++ + + L A +F+ G PN +Y I++ FC G ++ A
Sbjct: 585 PNVVTFTSLINGFCRNGD-LNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACF 643
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRK-----------SQVNRAVDLLEDMLNKGFVPDT 271
F +M +P+ ++ L+ GL SQ N ++ M++ G+
Sbjct: 644 FFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRI 703
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+Y ++L LC+ K ++ A +L +M KG PD V + ++ G C EGR D V+
Sbjct: 704 AAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPC 763
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+ L V Y + +G+ A +Q ++ K
Sbjct: 764 NFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVEK 802
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 81 IFDYASRQPNFR----HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+F +++ P R H+++ L+L L + + D L ++ P + S F L
Sbjct: 87 LFLFSALSPRLRSRPLHAHAVSLLLRLS---SHADEAMFDALADARAAGLPASSSAFAAL 143
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ ++ + A++ F M EF +P AF
Sbjct: 144 VAAHSSAGRHADAVQAFSRMDEFQSRP--------------------TAF---------- 173
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
YN +++A +G I +A L+N+M G P+ +Y +LM GLC++ A+
Sbjct: 174 ------VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ ++ML++G +P+ YT LL+SLC K+ EA +LL MK KGC PD V YN + G
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ GR +A + L + G L Y L+ GL FD Y + M+ + SP
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ +I+G G++++A L+ + K G P + ++ +C ++E+ + +E
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 437 IVKVEIKGDT 446
+++ + D+
Sbjct: 408 MLQNNLVLDS 417
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 154/352 (43%), Gaps = 7/352 (1%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
++S +D + + D +R S+S + L+ A + D + + + +
Sbjct: 113 LSSHADEAMFDALAD--ARAAGLPASSSAFAALVAAHSSAGRHA--DAVQAFSRMDEFQS 168
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+ F Y ++K +S + AL + M+ C P N +++ L + A
Sbjct: 169 RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLC-KQGMAGDAL 227
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F G++PN K Y +++ + C G I A L M ++G +PD +Y + GL
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +VN A L + + GF Y+ L++ L + ++ E + M + +PD+
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ G GR DA L+ M G +P+ Y T++ LCD G + A
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+ + +I G C G VDEA + +E+ + G P T+ ++
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 157/332 (47%), Gaps = 19/332 (5%)
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
L+ L+ + + ++ LI ++ D +++MLE N P L I+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP-DVVLYTIMIRGCA 358
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ A K G +P+T YN +++ C +GD+ A+TL ++M + ++ D
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ I++ GLC++ V+ A+ + ++M G P ++Y L++ R+ +L EA L +M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 298 KVKGCNP--------------DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ G NP D +V C+ G+ + A K+L + +G +P++V+
Sbjct: 479 EM-GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ GLC D A + + + KG SP LI G + ++A + + +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++G +P + ++ +C M+KL + +N
Sbjct: 598 QSGSSPSLSIYNSMMRSLC---RMKKLSQAIN 626
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 27/306 (8%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-----------LLVTHRNYL 182
T +I + L D A++ F M E C P N +++ ++ H+ +
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 183 RPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LF + + +++S ++ C +G + AY L + + GV+PDV +Y
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ AV L +++ KG PD ++Y TL++ L R + +A L + G
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLED-MPSNGCLPNLVSYRTLVGG---LCDQGMF 357
+P + YN+++ CR + A + D +P P V L + D +
Sbjct: 601 SSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFP--VESEVLANAHKEIEDGSLD 658
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D ++ +++ G+ + LI G C V + D+A + L + G + I
Sbjct: 659 DGVRELIKIDQEYGYISSNPYTIWLI-GLCQVRRTDDALRIFHTLQEFG--------IDI 709
Query: 418 VPQICA 423
P CA
Sbjct: 710 TPACCA 715
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 152/286 (53%), Gaps = 1/286 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI +S +RA+ F M+E +P +++ + +L+ AF L
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC-NEGHLQCAFRLLHLM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G++PN ++++++ A C + A + ++GV + Y L+ GLC+ ++
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L++ M+++GFVPD SY++L++ LCR+KKL +A +L M KG V Y +
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ RE + K+ + M + G P++V+Y V C++G + A+ + M+ +G
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P+ + LI+G+ N+G V +A E ++ G P+ED++ +++
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G PN YN ++ +C G++ A +F M P+V +Y L+ GLC+ +V R
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ L M+ G P+ ++YT L+ C + L+ A++LL M+ G P+ ++ ++
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ + +A L + G N V Y +L+ GLC G D A + MQ MIS+GF P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+LI G C K+ +A +LE++++ G T+ +I+ ++ E ++
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445
Query: 435 NEIVKVEIKGD 445
++++ I D
Sbjct: 446 DKMIATGINPD 456
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 135/320 (42%), Gaps = 46/320 (14%)
Query: 163 PLP--KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP--NTKSYNIMMRAFCFNGDIS 218
PLP + LN +L L HR + P + S +P N ++Y ++ A+C GDI
Sbjct: 37 PLPPLRCLNTLLMALARHRMF--PDMESLASR-----MPARNLRTYTTLINAYCLAGDIP 89
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A + G+ PD +Y + G CR + A + M +G + +YT LL
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALL 149
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPD--------------------------------- 305
+ L +REA + M+ C PD
Sbjct: 150 HGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209
Query: 306 --IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
IV YN ++ G+C G A KV E M N C PN+ +Y L+ GLC G + A
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M+ G P+ ALI+G CN G + A +L + G P++ T+ +++ +C
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 424 GEEMEKLGEVLNEIVKVEIK 443
E++E+ L +VK +K
Sbjct: 330 REKVEEAQLFLGSLVKKGVK 349
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A +F P+T Y M+ C G A L + G P++ Y
Sbjct: 158 VREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C ++ A+ + E M P+ +YT L++ LC+ K+ A L RM G
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V Y ++ G C EG A ++L M +NG +PN ++ L+ LC + + A+
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ ++ KG + V +LI G C GK+D A ++++++ G P ++ ++ +
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Query: 422 CAGEEMEKLGEVLNEIVKVEIKG 444
C +++ + +L ++++ I+
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQA 420
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y LI L + D+++ + SE + ++ LI +A M+
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
E + P I++ LV P +F G+ P+ +Y + +R++C G +
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPK-KIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A ++ +M +RGV P++ +Y L++G V++A E M+ KG+ P+ SYT L
Sbjct: 474 EDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVL 533
Query: 278 LNSLCRKKKLREA---YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L + +K + +K+ ++ N D + + ++ G ++G + +L M
Sbjct: 534 LRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE 593
Query: 335 NGCLPN 340
+G P+
Sbjct: 594 HGYQPS 599
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 183/369 (49%), Gaps = 21/369 (5%)
Query: 42 SSPEQQQESSIS-----NSKSPIGSPCRVQ---KLIASQSDPLLAKEIFDYASRQPNFRH 93
+SP+ + SS S +SK+P+ S + + L+ S+ DP EI AS P+ R
Sbjct: 19 ASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI 78
Query: 94 SNSTYLILILKLGRAKYFSLIDDILI-------TLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ + L K+FS + ++L LKSE + + I +YA++N+
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFA------AHAIVLYAQANML 132
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D +L+ FR + +F K LN +L + ++Y + +G+ P+ ++YN
Sbjct: 133 DHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M++ FC +G S +Y++ +M +G+ P+ S+ +++ G + + + +L M ++G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+Y + SLC++KK +EA LL M G P+ V Y+ ++ GFC E +A
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K+ + M + GC P+ Y TL+ LC G F+ A + + K + P FS+ +L+ G
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Query: 387 CNVGKVDEA 395
KV+EA
Sbjct: 373 AKDSKVEEA 381
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 234 PDVESYRILMQGLCRKSQVN---RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PD++S R + +Q N ++ + D+ S LL + K +EA
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 291 YKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
++ M K+ G PD+ YN ++ FC G A + ++ +M G PN S+ ++
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G + D K + +M +G + S + I+ C K EA +L+ +L AG P
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ T+ ++ C ++ E+ ++ +V K D+
Sbjct: 291 NTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PNT +Y+ ++ FC D A LF M RG PD E Y L+ LC+ A
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ L ++ + K +VP +L+N L + K+ EA +L+ ++K K
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK G P+++ Y ++ C GD A +L + E+ +P + L+
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 245 GLCRKSQVNRAVDLL 259
GL + S+V A +L+
Sbjct: 371 GLAKDSKVEEAKELI 385
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 167/333 (50%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N+ H STY+ LI L +Y + I +++ VTP+ + +++
Sbjct: 108 QFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVR 167
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P + N ++ +++ H +L+ G
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMI-IMLMHEGQYEKVHELYNEMSTEGHC 226
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M + G+ P + Y +L+ + + V+ A+
Sbjct: 227 FPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALS 286
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M ++ PD +YT L+ L + ++ EAY M+ +GC PD + N ++
Sbjct: 287 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLG 346
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ ++M + C+P++V+Y T++ L + + + + M G SP
Sbjct: 347 KAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS 406
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC ++++A +LEE+ + G P
Sbjct: 407 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 439
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 4/265 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P +FTY LI+ ++ D A F M C+P +N ++ L L
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFL-GKAGRL 351
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A LF+ +P+ +YN +++A F S + F +M E G+ P +Y I
Sbjct: 352 DDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 411
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +++ +A+ LLE+M KGF P +Y +L+++L + K+ A +L +K
Sbjct: 412 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y ++ + GR DA + ++M GC P++ +Y L+ GL GM D A
Sbjct: 472 GSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531
Query: 362 KYMQLMISKGFSPHFSVSHALIKGF 386
M+ M G P + + ++ G
Sbjct: 532 STMRRMQEHGCIPDINSYNIILNGL 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++PS FTY LI + ++N ++A+ M E P P +++ L + Y A
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY-DLA 460
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ ++ +++ Y +M++ G + A +F++M + G PDV +Y LM G
Sbjct: 461 CELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 520
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
L R ++ A+ + M G +PD SY +LN L +++ L
Sbjct: 521 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDL 562
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 30 IFCYSSSSQESPSSPEQQQESSISNSKSP----IGSPCRVQKLIASQSDPLLAKEIFDYA 85
+F S + E PS E+ +ES IS S I C+ ++ + +L +E+
Sbjct: 380 LFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRM---EKAMMLLEEM---- 432
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNL 145
+ F + Y LI LG+AK + L ++ LK + ++ +IK ++
Sbjct: 433 -DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGR 491
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ F M + C P N ++ L L A + +HG +P+ SYN
Sbjct: 492 LDDAINMFDEMNKLGCAPDVYAYNALMSGL-ARTGMLDEALSTMRRMQEHGCIPDINSYN 550
Query: 206 IMMRAFCFNGDISIAYTLF 224
I++ D+ + + F
Sbjct: 551 IILNGLQKQEDLIVQWRCF 569
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 160/323 (49%), Gaps = 4/323 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ V P+++TY L++ + A+ M C P N ++ L
Sbjct: 146 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF-CRAGELD 204
Query: 184 PAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A + + G PN ++N M+ C G + A +F++M G+ PDV SY L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++ ++ + +M +G VPD +++T+L+++ C+ L +A L+ +M+ +G
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ V + ++ GFC++G DA +E+M G P++V Y L+ G C G D+A++
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M +K P +I G+C VG +D A + +++LK G P T+ ++ +C
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
+ + E+ ++++ ++ D
Sbjct: 445 EEKRLNDACELFENMLQLGVQPD 467
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 160/314 (50%), Gaps = 4/314 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPA 185
P+ TY L+ + + D A + M E N KP N ++ L + A
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK-AGRMEGA 242
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G+ P+ SYN ++ +C G + + +F++M +RG++PDV ++ L+
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + +AV L+ M +G + +++T L++ C+K L +A + M+ G P
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+C+ GR A +++ +M + P++V+Y T++ G C G D A + Q
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ KG P +LI+G C ++++AC + E +L+ G P E T+ ++ C
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Query: 426 EMEKLGEVLNEIVK 439
+EK + +E+++
Sbjct: 483 NVEKALSLHDEMIR 496
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI+ YA P A P N +L L L A S
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVL--LALSDASLPSARRFLSSM 143
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+HGV PN +YNI++RA C G + A + M G P+ +Y L+ CR ++
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 253 NRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A ++ M +G P+ +++ +++N LC+ ++ A K+ M +G PD+V YNT
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C+ G ++ V +M G +P++V++ +L+ C G + A + M +G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ ALI GFC G +D+A +EE+ K G P + ++ C M+
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 432 EVLNEIVKVEIKGDT 446
E++ E+ +K D
Sbjct: 384 ELIREMEAKRVKPDV 398
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 22/335 (6%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAES 143
R+ R + T+ LI + + +DD L+ ++ + PS+ Y LI Y +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGF---LDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
D A + R M KP + I+ N L AF L + K GVLP+ +
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN-LDSAFQLNQKMLKKGVLPDAIT 435
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y+ ++R C ++ A LF M + GV PD +Y L+ G C++ V +A+ L ++M+
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL--------- 314
KG +PD ++Y+ L+N L + + +EA++LL ++ + PD + Y+ ++L
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555
Query: 315 ------GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
GFC +G +A KV + M + Y L+ G C G A + + M+
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
GFSP+ + + +L++G G V EA +++LL
Sbjct: 616 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 157/324 (48%), Gaps = 4/324 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ RA + + ++L E P+L T+ ++ ++ + A K F
Sbjct: 189 TYNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P N +L L + +F + G++P+ ++ ++ A C
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCK-VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A L +M ERG+ + ++ L+ G C+K ++ A+ +E+M G P + Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+N C+ ++ A +L+ M+ K PD+V Y+T++ G+C+ G A ++ + M
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G LP+ ++Y +L+ GLC++ + A + + M+ G P LI G C G V++
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486
Query: 395 ACGVLEELLKAGEAPHEDTWVMIV 418
A + +E+++ G P T+ +++
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLI 510
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 16/301 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + D AL M + +P N ++ + A +L +
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK-LGRMDLARELIREM 389
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
V P+ +Y+ ++ +C G++ A+ L KM ++GV+PD +Y L++GLC + ++
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A +L E+ML G PD +YTTL++ C++ + +A L M KG PD+V Y+ +
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR---------------TLVGGLCDQGMF 357
+ G + R +A ++L + +P+ + Y L+ G C +G+
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A K Q M+ + + SV LI G C G V +A +++L++G +P+ + + +
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 629
Query: 418 V 418
V
Sbjct: 630 V 630
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ +L A + K G+ P+ YN ++ +C G + +A L +M + V PDV +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G C+ ++ A L + ML KG +PD ++Y++L+ LC +K+L +A +L M
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD Y T++ G C+EG A + ++M G LP++V+Y L+ GL
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Query: 359 VAK----------------KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
A KY LM+ + SV AL+KGFC G + EA V + +
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVV-ALLKGFCMKGLMKEADKVYQSM 579
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEK 429
L + +++ C G + K
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRK 606
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + +Y L+ Y + +L F M + P ++ N L A
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN-LEQA 312
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G+ N ++ ++ FC G + A +M + G+ P V Y L+ G
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++ A +L+ +M K PD ++Y+T+++ C+ L A++L +M KG PD
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y++++ G C E R DAC++ E+M G P+ +Y TL+ G C +G + A
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
MI KG P LI G + EA +L +L HED
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY------HED 533
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 182/417 (43%), Gaps = 37/417 (8%)
Query: 65 VQKLIASQSDPLLAKEIFD-YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
V K+ D LA E+F +S + F+HS T L+ R K ++L +
Sbjct: 88 VVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELA 147
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYL 182
+ + LI Y + P+ A R M E F P K N +L L L
Sbjct: 148 TIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVL 207
Query: 183 RPAFDLFKSAHK----------------------------------HGVLPNTKSYNIMM 208
A D F++ + +G + +Y ++
Sbjct: 208 -AAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIV 266
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
N I A L K+ G P + +Y L+ GLC+ ++ A+DLL +++ G
Sbjct: 267 NWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 326
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++YT+L++ L ++K+ EAYKL M +G D V Y ++ G + G+ A V
Sbjct: 327 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSV 386
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M S+GC+P++V+ T++ GL G A + + M ++G +P+ V ALI G C
Sbjct: 387 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 446
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
K+D A +L ++ KA P T+ +++ +C ++E +E+++ K D
Sbjct: 447 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 503
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 9/313 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP++ TY L+ + + A+ R +++ C P +++ L + A+
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE-AY 349
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LFK G+ +T Y ++R G I A +++ M G +PDV + ++ GL
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ AV + + M +G P+ + Y+ L++ LC+ +K+ A ++L +MK C PD
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YN ++ G C+ G A ++M GC P++ +Y L+ GLC G D A +
Sbjct: 470 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDD 529
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M S F V +L+ G C GK++ C + E+ ++G A + T ++ +C
Sbjct: 530 MSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANR 583
Query: 427 MEKLGEVLNEIVK 439
+++ + N I K
Sbjct: 584 VDEAVSLFNAIRK 596
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
PV+ + F+ LI ++ + +A + C I+ L ++ ++ A
Sbjct: 221 PVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKK-IQEAV 279
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + +G P +YN ++ C G + A L K+ + G PDV +Y L+ GL
Sbjct: 280 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
++ + A L ++M ++G DT+ YT L+ L + K+ +A + M GC PD+
Sbjct: 340 GKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDV 399
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V +T++ G + GR A ++ + M + G PN V Y L+ GLC D A + +
Sbjct: 400 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 459
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M +P + LI G C G V+ A +E+L+AG P T+ +++ +C
Sbjct: 460 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGN 519
Query: 427 MEKLGEVLNEI 437
+ VL+++
Sbjct: 520 TDAACGVLDDM 530
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 39/278 (14%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++K+ HG +P+ + + M+ G I A +F M RG+ P+ Y L+
Sbjct: 383 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 442
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ +++ A+++L M PDT++Y L++ LC+ + A M GC P
Sbjct: 443 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 502
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ YN ++ G C+ G AC VL+DM S+ + Y +LV GLC G +
Sbjct: 503 DVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLF 557
Query: 365 QLMISKGFS---------------------------------PHFSVSHALIKGFCNVGK 391
M G + PH +++I GK
Sbjct: 558 HEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGK 617
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
V+E V +E+ + + P T+ ++ + M++
Sbjct: 618 VNEGQAVYQEMTRWWK-PDRVTYNALLNGMIGANRMDR 654
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 32/263 (12%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ F+SM P + ++ L R + A ++ K P+T +YNI++
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARK-MDCALEMLAQMKKAFCTPDTITYNILI 476
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +GD+ A F++M E G PDV +Y IL+ GLC+ + A +L+DM + FV
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV 536
Query: 269 PDTL-----------------------------SYTTLLNSLCRKKKLREAYKLLCRMKV 299
+L + T L+ LC+ ++ EA L ++
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G P YN+++ + G+ + V ++M + P+ V+Y L+ G+ D
Sbjct: 597 EGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDR 654
Query: 360 AKKYMQLMISKGFSPHFSVSHAL 382
A Y M +G+ P S+ H L
Sbjct: 655 AHYYYLEMTGRGYVPPVSILHKL 677
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A F + R F+H T+ +I LGRA + IL+ + ++ LF LI
Sbjct: 137 ALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLI 196
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ Y ++ + A+K F+ M E GV
Sbjct: 197 ESYGKAGIVQEAVKIFQKMKEL------------------------------------GV 220
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ KSY+ + + G +A FN M G+ P +Y +++ G ++ A
Sbjct: 221 ERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKR 280
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++G PD ++Y T++N CR K + EA + MK K P ++ Y T++ G+
Sbjct: 281 FYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYV 340
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH-F 376
RA DA ++ E+M + G PN ++Y TL+ GLCD A+K + M+++ F+P
Sbjct: 341 SVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDN 400
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ L+ C G +D A VL+ +++ + +++ C ++ ++L
Sbjct: 401 SIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLEN 460
Query: 437 IVKVEI 442
+V+ EI
Sbjct: 461 LVEKEI 466
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY-P 127
++ D L E A +PN + TY L+ L A+ IL + + H+ P
Sbjct: 342 VSRADDALRLFEEMKAAGEKPN----DITYSTLLPGLCDAEKLPEARKILTEMVTRHFAP 397
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN---------------CKP-LPKQLNRI 171
S+F L+ + D A+ ++M+ + CK + Q ++
Sbjct: 398 KDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKL 457
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
LE LV LRP L A +YN++++ C +G A T F ++ ++G
Sbjct: 458 LENLVEKEIILRPQSTLEMEA---------SAYNLIIQYLCNHGQTGKADTFFRQLLKKG 508
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ +V ++ L++G ++ + A ++L+ M +G D SY L+ S K + +A
Sbjct: 509 IQDEV-AFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAK 567
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M G +PD + +V+ +GR A +V+ M G NL ++ L
Sbjct: 568 TALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+G + A + L+++ P F ++L+ C GK A +L+
Sbjct: 628 FMRGHDEEALGRINLLMNCNCPPDF---NSLLSVLCEKGKTTSAFKLLD 673
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 133/350 (38%), Gaps = 44/350 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + +K ++ T +T +IK Y + D AL+ F M
Sbjct: 296 TYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEM 355
Query: 157 LEFNCKP-----------------LPKQLNRILELLVTH------------------RNY 181
KP LP+ + E++ H
Sbjct: 356 KAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGD 415
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-------- 233
L A + K+ + + Y I++ C G A L + E+ ++
Sbjct: 416 LDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLE 475
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+ +Y +++Q LC Q +A +L KG + D +++ L+ ++ A+++
Sbjct: 476 MEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKEGNPDLAFEM 534
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M +G + D Y ++ + +G DA L+ M NG P+ +R+++ L
Sbjct: 535 LKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFA 594
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
G A + M M+ KG + + + +++ G +EA G + L+
Sbjct: 595 DGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLM 644
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF++ K + GV + +SY ++++++ G+ + A T + M E G PD +R +M+
Sbjct: 531 AFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVME 590
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L +V A ++ ML+KG + +L +L + EA + + C P
Sbjct: 591 SLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPP 650
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D +N+++ C +G+ A K+L+ C SY ++ L G A +
Sbjct: 651 D---FNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAIL 707
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
++ KG + +S LIK G +A +L ++K G+
Sbjct: 708 CKIMEKGGAKDWSSCDDLIKSLNQEGNTKQA-DILSRMIKGGD 749
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 169/325 (52%), Gaps = 2/325 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + P T + T + + ES + + + R M+E C+P N I+ + +
Sbjct: 127 MKLGYEPDTTTFNTLINGLCLESKVSEAVVLVAR-MVENGCQPNVVTYNSIVNGICKSGD 185
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A DL + + V + +Y+ ++ + C +G I A +LF +M +G+ + +Y
Sbjct: 186 T-SLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYN 244
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GLC+ + N V LL+DM ++ +P+ +++ L++ ++ KL+EA +L M K
Sbjct: 245 SLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +P+ + YN+++ G+C + R +A +L+ M N C P++V++ +L+ G C D
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEG 364
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + + +G + L++GFC GK++ A + +E++ G P T+ +++
Sbjct: 365 MKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGD 445
+C ++EK E+ ++ K ++ D
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLD 449
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 139/263 (52%), Gaps = 2/263 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
++G PN +YN ++ C +GD S+A L KM ER V DV +Y ++ LCR ++
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ L ++M KG ++Y +L+ LC+ K + +LL M + P+++ +N ++
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
F +EG+ +A ++ ++M + G PN ++Y +L+ G C Q A + LM+ S
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P +LIKG+C V +VDE + ++ K G + T+ ++V C ++E E+
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402
Query: 434 LNEIVKVEIKGDTRIVEAGIGLE 456
E+V + + D ++ GI L+
Sbjct: 403 FQEMVSLGVLPD--VMTYGILLD 423
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 138/262 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + K G P+T ++N ++ C +S A L +M E G P+V +Y ++
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+C+ + A+DLL M + D +Y+T+++SLCR + A L M+ KG
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V YN++V G C+ G+ D ++L+DM S +PN++++ L+ +G A +
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI+KG SP+ ++L+ G+C ++ EA +L+ +++ +P T+ ++ C
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
+ +++ ++ +I K + +T
Sbjct: 359 KRVDEGMKLFRKISKRGLVANT 380
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+ M+ +PLP +R + + + + D K +G+ N +
Sbjct: 47 DDAIDLFQEMIR--SRPLPSLVDFSRFFSGVASTKQF-NLVLDFCKKMELNGIAHNIYTL 103
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC AY++ K+ + G PD ++ L+ GLC +S+V+ AV L+ M+
Sbjct: 104 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE 163
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G P+ ++Y +++N +C+ A LL +M + D+ Y+T++ CR+G
Sbjct: 164 NGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDA 223
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + ++M + G +LV+Y +LVGGLC G ++ + ++ M S+ P+ + LI
Sbjct: 224 AISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
F GK+ EA + +E++ G +P+ T+ ++ C + + +L+ +V+
Sbjct: 284 VFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+ TY L+ Y N A M+ NC P +++ + +
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR-VDEG 364
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ K G++ NT +Y+I+++ FC +G + IA LF +M GV+PDV +Y IL+ G
Sbjct: 365 MKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDG 424
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+++ ED+ D + YT ++ +C+ K+ +A+ L C + KG P+
Sbjct: 425 LCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 484
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y ++ G C++G +A +L M +G PN +Y TL+ G + K ++
Sbjct: 485 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIE 544
Query: 366 LMISKGFSPHFS 377
M S GFS S
Sbjct: 545 EMKSCGFSADAS 556
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 177/379 (46%), Gaps = 13/379 (3%)
Query: 45 EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILK 104
E+ ++ + + I S CR + A+ S L KE+ + S TY L+
Sbjct: 198 ERNVKADVFTYSTIIDSLCRDGCIDAAIS---LFKEM-----ETKGIKSSLVTYNSLVGG 249
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCK 162
L +A ++ D + + + P++ T+ LI ++ + A + ++ M+
Sbjct: 250 LCKAGKWN--DGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +++ N L A ++ ++ P+ ++ +++ +C +
Sbjct: 308 PNTITYNSLMDGYCMQ-NRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
LF K+ +RG++ + +Y IL+QG C+ ++ A +L ++M++ G +PD ++Y LL+ LC
Sbjct: 367 LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLC 426
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
KL +A ++ ++ N DIV Y ++ G C+ G+ DA + +P G PN++
Sbjct: 427 DNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 486
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y ++ GLC +G A ++ M G P+ + LI+ G + + ++EE+
Sbjct: 487 TYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546
Query: 403 LKAGEAPHEDTWVMIVPQI 421
G + + M++ +
Sbjct: 547 KSCGFSADASSIKMVIDML 565
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A DLF+ + LP+ ++ ++ KM G+ ++ + I++
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
CR + A +L ++ G+ PDT ++ TL+N LC + K+ EA L+ RM GC P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YN++V G C+ G A +L M ++ +Y T++ LC G D A
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M +KG ++L+ G C GK ++ +L+++ P+ T+ +++
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
++++ E+ E++ I +T
Sbjct: 289 GKLQEANELYKEMITKGISPNT 310
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS++ LI++Y + +L+ FR M + P N IL +V + +
Sbjct: 163 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFL 221
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K K + P+ ++NI++ C G + L KM + G P + +Y ++ C+K
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A++LL+ M +KG D +Y L++ LCR ++ + Y LL M+ + +P+ V Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
NT++ GF EG+ + A ++L +M S G PN V++ L+ G +G F A K +M +
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
KG +P L+ G C + D A G + + G T+ ++ +C +++
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 430 LGEVLNEIVKVEIKGD 445
+LNE+ K I D
Sbjct: 462 AVVLLNEMSKDGIDPD 477
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 13/356 (3%)
Query: 97 TYLILILKLGR----AKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY +LI L R AK + L+ D+ + P+ TY LI ++ A
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDM------RKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ ML F P N +++ ++ N+ + A +F G+ P+ SY +++
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNF-KEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C N + +A + +M GV +Y ++ GLC+ ++ AV LL +M G PD
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+ L+N C+ + + A +++CR+ G +P+ + Y+T++ CR G +A ++ E
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M G + ++ LV LC G A+++M+ M S G P+ LI G+ N G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +A V +E+ K G P T+ ++ +C G + + + L + V DT
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 6/358 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ +L+ L +A + ++ + + S+ F LI Y S +A F M
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +L+ L +LR A KS H +T YN ++ A C +G+
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKG-GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYT 275
++ A +LF +M +R ++PD +Y L+ GLCRK + A+ ++ +G V P+ + YT
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++ + + + + +M G PDIV N ++ G+ R G+ +L +M +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVSHALIKGFCNVGKVD 393
PNL +Y L+ G + DV+ ++ + +I G P H+L+ G C ++
Sbjct: 789 NGGPNLTTYNILLHGYSKRK--DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+L+ + G T+ M++ + CA E+ +++ + + I D +A
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 114/242 (47%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A L K G+ P+ +Y+ ++ FC G A + +++ G+ P+ Y
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ CR + A+ + E M+ +G D ++ L+ SLC+ K+ EA + + M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+ V ++ ++ G+ G + A V ++M G P +Y +L+ GLC G A
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+K+++ + + + + + L+ C G + +A + E+++ P T+ ++
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 421 IC 422
+C
Sbjct: 698 LC 699
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
N Y+I++R + G I + +F M G P V + ++ + + +
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L++ML + PD ++ L+N LC + ++ L+ +M+ G P IV YNTV+ +C+
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKGFSPHF 376
+GR A ++L+ M S G ++ +Y L+ LC +AK Y+ L M + P+
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN--RIAKGYLLLRDMRKRMIHPNE 338
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKLGEVLN 435
+ LI GF N GKV A +L E+L G +P+ T+ +I I G E L
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN----FKEALK 394
Query: 436 EIVKVEIKGDT 446
+E KG T
Sbjct: 395 MFYMMEAKGLT 405
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A ++++ G + ++N+++ + C G ++ A M G++P+ S+
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G + +A + ++M G P +Y +LL LC+ LREA K L +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ------- 354
D V YNT++ C+ G A + +M LP+ +Y +L+ GLC +
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 355 ------------------------GMFDVAKK-----YMQLMISKGFSPHFSVSHALIKG 385
GMF + + + M + G +P ++A+I G
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +GK+++ +L E+ P+ T+ +++
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C + LNR HR + + + K G+ P ++ Y ++ C GDI A
Sbjct: 902 CDAMVSVLNR------NHR--FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + +M + P + +++ L + + + A LL ML VP S+TTL++
Sbjct: 954 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C+ + EA +L M G D+V YN ++ G C +G A ++ E+M +G L N
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073
Query: 341 LVSYRTLVGG-LCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+Y+ L+ G L + F A ++ ++++GF S+S
Sbjct: 1074 ATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1114
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ + D+S ++ L+ + G++PD + L+ G+C + + + +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ + +G D ++ L++ C ++ A+ L+ M G + D + +V R
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R ++ VL +M G P Y L+ GLC G A + MI+ P
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA-GEEMEKL 430
A+++ GK DEA +L +LK P ++ ++ C G +E L
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRPAF 186
P+L TY I ++ S D + +RS++ N LP +L L L + N L
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSII-LN-GILPDKLTCHSLVLGICESNMLEIGL 849
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL----------------------- 223
+ K+ GV + ++N+++ C NG+I+ A+ L
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909
Query: 224 ------------FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
++M ++G+ P+ Y L+ GLCR + A + E+M+ P
Sbjct: 910 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ + ++ +L + K EA LL M P I + T++ C+ G I+A ++
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 1029
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
M + G +LVSY L+ GLC +G +A + + M GF + + ALI+G
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 45/352 (12%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
K FS+ D++ K H+P + FTY L+K + A K +S+
Sbjct: 601 KAFSVFDEMT---KVGHHP---TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA------ 220
N +L + N L A LF + +LP++ +Y ++ C G IA
Sbjct: 655 MYNTLLTAMCKSGN-LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 221 -------------YTLF-NKMFERGVM----------------PDVESYRILMQGLCRKS 250
YT F + MF+ G PD+ + ++ G R
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ + DLL +M N+ P+ +Y LL+ ++K + ++ L + + G PD + +
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++VLG C K+L+ G + ++ L+ C G + A +++M S
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G S A++ + E+ VL E+ K G +P ++ ++ +C
Sbjct: 894 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 65/145 (44%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CN + Y+ ++ + REG D+ ++ M G P++ + ++G + G
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ M+ + P + + LI C G +++ +++++ K+G AP T+ ++
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C + E+L+ + + D
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADV 303
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 182/432 (42%), Gaps = 56/432 (12%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-------- 123
+S PL A +F ++ Q F+H++ + ++ L + FS +L+ L S
Sbjct: 16 KSPPLKALSLFTSSALQ-GFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSF 74
Query: 124 --------------EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
+ +P + +I + S LP++AL F M+ P N
Sbjct: 75 TPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFN 134
Query: 170 RILELLVTHR---------------------------------NYLRPAFDLFKSAHKHG 196
+L LL+ YL F++ + G
Sbjct: 135 NLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG 194
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
+ PN Y ++ C NGDI LF KM E V+ + +Y +L+ G + +
Sbjct: 195 LSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGI 254
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L E M G VP+ +Y +++ C KL A++L M+ +G ++V YNT++ G
Sbjct: 255 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 314
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+E R ++A +++ M +G PNL+SY TL+ G C G D A M S G SP
Sbjct: 315 CQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 374
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ + LI GF ++ E+ G +P + T+ +++ + + +EK ++ +
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434
Query: 437 IVKVEIKGDTRI 448
+ K + D I
Sbjct: 435 MEKAGLVADIYI 446
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 157/345 (45%), Gaps = 12/345 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
K++F Y + + + TY +LI K+G K D I + K + + P+++T
Sbjct: 218 GKQLF-YKMGELDVVANQYTYTVLINGFFKMGLKK-----DGIELYEKMKLTGIVPNVYT 271
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y +I + A + F M E N ++ L R L A L
Sbjct: 272 YNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLE-AERLMCRM 330
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN SYN ++ +C G++ A +LFN+M G P + +Y IL+ G
Sbjct: 331 KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNS 390
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
D++ +M +G P ++YT L+++L R + +A+++ M+ G DI Y +
Sbjct: 391 AGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL 450
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G +A K+ + + PN V Y T++ G C +G A + ++ M G
Sbjct: 451 IHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 510
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
P+ + ++ I+ C K EA +L+++++ G P W MI
Sbjct: 511 VPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ +L++ G++PN +YN M+ C +G ++ A+ LF++M ERGV +V +Y L
Sbjct: 251 KDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTL 310
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC++ +V A L+ M G P+ +SY TL++ C L +A L +MK G
Sbjct: 311 IGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ 370
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+P + YN ++ GF + ++ +M + G P+ V+Y L+ L + A +
Sbjct: 371 SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQ 430
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G + LI G C VG + EA + + L + P++ + ++ C
Sbjct: 431 IYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYC 490
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 61 SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP V +++ + S+ +LA F +A RQ FR+S + LI LG+ K F L+ ++
Sbjct: 119 SPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVE 178
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++ ++ F +++ YA + A++TF M F K N ++++L +
Sbjct: 179 AMRCRSC-LSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSK 237
Query: 180 NYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ A +FK + G +P+ K+Y ++M + D+ + ++ +M + G+ PDV +
Sbjct: 238 Q-VKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVA 296
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL----------------- 281
Y +L+ C+ + + A+ + +M G +P Y L+N L
Sbjct: 297 YGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSK 356
Query: 282 ------------------CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
CR + A+K++ M+ G P+ Y+ ++ + +
Sbjct: 357 ESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIE 416
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A + + M +GC P L +Y +VG C D+A K + M KG P + ALI
Sbjct: 417 EAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALI 476
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAP 409
G C +++EAC +E+L G P
Sbjct: 477 NGLCFENRLEEACVYFQEMLDKGIRP 502
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 3/265 (1%)
Query: 185 AFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A F+ A + G + + ++ ++ A + ++L M R + ++++I++
Sbjct: 137 ALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSK-DTFKIIV 195
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-C 302
+ R +V AV+ E M + G D Y L++ L + K++++A+ + MK KG
Sbjct: 196 RRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRF 255
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+ Y ++ G+ E + V ++M G P++V+Y L+ C G D A K
Sbjct: 256 IPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIK 315
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G P V LI G ++ ++DEA + ++G T ++ C
Sbjct: 316 VFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYC 375
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTR 447
E ++++E+ K I +TR
Sbjct: 376 RALEFHHAFKMVDEMRKSGIGPNTR 400
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S Y +LI LG + K +P+ +I Y + A K
Sbjct: 328 SPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMV 387
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M + P + + IL L+ + A++LF+ + G P +Y +M+ FC
Sbjct: 388 DEMRKSGIGPNTRTYDIILNHLIKSEK-IEEAYNLFQRMERDGCEPELNTYTMMVGMFCS 446
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
N + +A ++ +M E+GV+P + + L+ GLC ++++ A ++ML+KG P
Sbjct: 447 NERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQL 506
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKV 299
++ L +L ++ A ++ R+++
Sbjct: 507 FSNLKEALVEGGRITLAQEVTQRLEM 532
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 164/333 (49%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N+ H STY+ LI L +Y + I +++ VTP + +I+
Sbjct: 104 QFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIR 163
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P + N ++ +++ H +L+ G
Sbjct: 164 MLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMI-IMLMHEGQYEKVHELYNEMSNEGHC 222
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M + G+ P + Y +L+ + + V+ A+
Sbjct: 223 FPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALG 282
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M ++ PD +YT L+ L + + EAY M+ +GC PD V N ++
Sbjct: 283 LFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLG 342
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR DA K+ E+M + C+P++V+Y T++ L + + + + M G SP
Sbjct: 343 KAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSP 402
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC + ++A +LEE+ + G P
Sbjct: 403 FTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPP 435
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 4/316 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P +FTY LI+ ++ D A F M C+P +N ++ L L
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFL-GKAGRL 347
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A LF+ +P+ +YN +++A F IS + F +M G+ P +Y I
Sbjct: 348 DDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSI 407
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ ++ +A+ LLE+M KGF P +Y +L+++L + K+ A++L +K
Sbjct: 408 LIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENC 467
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ Y ++ + GR DA + ++M GC PN+ +Y L+ GL GM D A
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M+ M G P + + ++ G G A +L + ++ P ++ ++ +
Sbjct: 528 TTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAM 587
Query: 422 CAGEEMEKLGEVLNEI 437
E+ +++ E+
Sbjct: 588 SHAGLFEEAAKLMKEM 603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 38/332 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+A F + ++ E + +I ++ D A+K F M
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEM 357
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N I++ L ++ + F+ G+ P+ +Y+I++ FC
Sbjct: 358 GTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNR 417
Query: 217 ISIAYTLFNKMFERGVMP-----------------------------------DVESYRI 241
A L +M E+G P Y +
Sbjct: 418 TEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAV 477
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ L + +++ AV+L ++M G P+ +Y L++ L R L EA + RM+ G
Sbjct: 478 MIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHG 537
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI YN ++ G + G A ++L +M + P+ VSY T++G + G+F+ A
Sbjct: 538 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAA 597
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
K M+ M GF ++++ +GKVD
Sbjct: 598 KLMKEMNVLGFEYDLITYSSILEA---IGKVD 626
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+ Y LI LG+AK + + ++ LK + ++ +IK ++ D A+ F
Sbjct: 438 AAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDE 497
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M + C P N ++ L L A + +HG +P+ SYNI++ G
Sbjct: 498 MNKLGCTPNVYAYNALMSGL-ARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTG 556
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
A + + M + + PD SY ++ + A L+++M GF D ++Y+
Sbjct: 557 GPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYS 616
Query: 276 TLLNSLCR 283
++L ++ +
Sbjct: 617 SILEAIGK 624
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 2/319 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + P T + T + + E + +A+ M+E C+P N I+ + +
Sbjct: 150 MKLGYEPDTTTFNTLINGLCLEGKVS-KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
AFD+ + + V + +Y+ ++ + C +G I A +LF +M +G+ V +Y
Sbjct: 209 T-SLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++GLC+ + N LL+DM+++ VP+ +++ LL+ ++ KL+EA +L M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +P+I+ YNT++ G+C + R +A +L+ M N C P++V++ +L+ G C D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + + +G + L++GFC GK+ A + +E++ G P T+ +++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+C ++EK E+ ++ K
Sbjct: 448 LCDNGKLEKALEIFEDLQK 466
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 131/289 (45%), Gaps = 35/289 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + K G P+T ++N ++ C G +S A L ++M E G PD+ +Y ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+CR + A D+L M + D +Y+T+++SLCR + A L M+ KG
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS------------------------------ 334
+V YN++V G C+ G+ D +L+DM S
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 335 -----NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
G PN+++Y TL+ G C Q A + LM+ SP +LIKG+C V
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+VD+ V + K G + T+ ++V C +++ E+ E+V
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY ++ S A R M E N K + I++ L + A
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC-RDGCIDAAIS 249
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK G+ + +YN ++R C G + L M R ++P+V ++ +L+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +L ++M+ +G P+ ++Y TL++ C + +L EA +L M C+PDIV
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ +++ G+C R D KV ++ G + N V+Y LV G C G +A++ Q M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C+ GK+++A + E+L K+ + I+ +C G ++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 428 E 428
E
Sbjct: 490 E 490
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 150/295 (50%), Gaps = 5/295 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+ M+ +PLP +R + + + D K +G+ N +
Sbjct: 70 DDAIALFQEMIR--SRPLPGLVDFSRFFSAIARTKQF-NLVLDFCKQLELNGIAHNIYTL 126
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC AY++ K+ + G PD ++ L+ GLC + +V++AV L++ M+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE 186
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD ++Y +++N +CR A+ +L +M+ + D+ Y+T++ CR+G
Sbjct: 187 NGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + ++M + G ++V+Y +LV GLC G ++ ++ M+S+ P+ + L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
F GK+ EA + +E++ G +P+ T+ ++ C + + +L+ +V+
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY L+ Y N A M+ C P +++ + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR-VDDG 387
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ K G++ N +Y+I+++ FC +G I +A LF +M GV+PDV +Y IL+ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+++ ED+ + YTT++ +C+ K+ +A+ L C + KG P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y ++ G C++G +A +L M +G PN +Y TL+ G + K ++
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 366 LMISKGFSPHFS 377
M S GFS S
Sbjct: 568 EMKSCGFSADAS 579
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 180/383 (46%), Gaps = 13/383 (3%)
Query: 45 EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILK 104
E+ ++ + + I S CR + A+ S L KE+ + S TY L+
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAIS---LFKEM-----ETKGIKSSVVTYNSLVRG 272
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCK 162
L +A ++ D L+ + P++ T+ L+ ++ + A + ++ M+
Sbjct: 273 LCKAGKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +++ N L A ++ ++ P+ ++ +++ +C +
Sbjct: 331 PNIITYNTLMDGYCMQ-NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F + +RG++ + +Y IL+QG C+ ++ A +L ++M++ G +PD ++Y LL+ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
KL +A ++ ++ + IV Y T++ G C+ G+ DA + +P G PN++
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y ++ GLC +G A ++ M G +P+ + LI+ G + + ++EE+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 403 LKAGEAPHEDTWVMIVPQICAGE 425
G + + M++ + +GE
Sbjct: 570 KSCGFSADASSIKMVIDMLLSGE 592
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 166/352 (47%), Gaps = 1/352 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ + F ++++L ++ + + +T LI+ Y S A K F M
Sbjct: 252 TYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKM 311
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE + I+ N ++ AF LF ++ G++ N +Y ++ C +G
Sbjct: 312 LERGVEADIHVFTSIISWQCKLGN-MKRAFALFDELNERGLVANAHTYGALIHGTCNSGQ 370
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L N+M +G+ ++ + L+ G C+K ++ A+ + + M KGF D +Y T
Sbjct: 371 LDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNT 430
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+ LC+ + EA + L M KG +P+ V + ++ C+EG ++A +V +DM G
Sbjct: 431 IAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKG 490
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
PN+V+Y TL+ G +G A + M S G + L+ G C GKV+EA
Sbjct: 491 EKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEAL 550
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+L E+ + G A T+ I+ + E+ + +E++ + D R+
Sbjct: 551 TLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRV 602
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
+L F+ M+EF + +++ L + + A DL G+ PN +YN ++
Sbjct: 199 SLGFFKKMVEFKVDVTVYSMTIVIDGLC-KKGRVERAKDLMLEMTGKGIKPNVVTYNTLV 257
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A+ D + M V+ + +Y +L++ ++ A + E ML +G
Sbjct: 258 NAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVE 317
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +T++++ C+ ++ A+ L + +G + Y ++ G C G+ A +
Sbjct: 318 ADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEML 377
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ +M S G NLV + TL+ G C +GM D A + +M KGF + + G C
Sbjct: 378 VNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCK 437
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + +EA L +++ G P+ ++ +++ C
Sbjct: 438 LNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHC 471
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 165 PKQLNRILELLV---THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
PK + ++ ++L + F +F +G+ + +S + + A + + ++
Sbjct: 141 PKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSL 200
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
F KM E V V S I++ GLC+K +V RA DL+ +M KG P+ ++Y TL+N+
Sbjct: 201 GFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAY 260
Query: 282 CR-----------------------------------KKKLREAYKLLCRMKVKGCNPDI 306
+ K+ EA K+ +M +G DI
Sbjct: 261 IKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADI 320
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ +++ C+ G A + +++ G + N +Y L+ G C+ G D A+ +
Sbjct: 321 HVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNE 380
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M S+G + + + LI G+C G +DEA + + + K G T+ I +C
Sbjct: 381 MQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLC 436
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 133 FTYLIKIYA-ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
FT +I I+ E NL + A + F+ M + KP N +++ + + L+ A+ L
Sbjct: 463 FTIMIDIHCKEGNLVE-AERVFQDMKKKGEKPNVVTYNTLIDGY-SKKGKLKEAYRLKDE 520
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G+ + +Y ++ C G + A TL N++ +G+ + +Y ++ GL ++ +
Sbjct: 521 MESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGR 580
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
A L ++M+ G PD YT+L+ +L
Sbjct: 581 SEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 128/255 (50%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L T L A F S + G++P+ Y I+++ +C G IS+A L N+M ++G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y ++ GLC++ + A L +M + PD+ + T L++ C+ L+ A +L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+MK K D+V YNT++ GF + G A ++ DM S LP +SY LV LC +
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + MISK P + +++IKG+C G + LE+++ G P ++
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 415 VMIVPQICAGEEMEK 429
++ E M K
Sbjct: 624 NTLIYGFVREENMSK 638
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 33/419 (7%)
Query: 46 QQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQ-PNFRHSNSTYLILILK 104
+Q +++ N + V+ L ++D L + D PNF+H++ + +I
Sbjct: 63 KQGNNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHI 122
Query: 105 LGRAKYFSLID---------------DILITLKS--EHYPVTPSLFTYLIKIYAESNLPD 147
L R+ S +I+ +L S + S+F LI+ Y ++
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 182
Query: 148 RALKTFRSMLEFN-------CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
A + F + C L L RI ++ A+ +++ + GV N
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRI--------GWVELAWGVYQEISRSGVGIN 234
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+ NIM+ A C +G + T +++ E+GV PD+ +Y L+ K + A +L+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M KGF P +Y T++N LC+ K A ++ M G +PD Y ++++ C++G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
++ KV DM S +P+LV + +++ G D A Y + G P +
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI+G+C G + A + E+L+ G A T+ I+ +C + + + ++ NE+ +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 38/317 (11%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI+ Y + A+ ML+ C N IL L R L A LF
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC-KRKMLGEADKLFNE 470
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + P++ + I++ C G++ A LF KM E+ + DV +Y L+ G +
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A ++ DM++K +P +SY+ L+N+LC K L EA+++ M K P ++ N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV----------------------- 348
++ G+CR G A D LE M S G +P+ +SY TL+
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 349 --------------GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G C Q A+ ++ MI +G +P S +I GF + + E
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 395 ACGVLEELLKAGEAPHE 411
A + +E+L+ G +P +
Sbjct: 711 AFRIHDEMLQRGFSPDD 727
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY LI Y+ L + A + +M P N ++ L H Y R A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER-A 324
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F + G+ P++ +Y ++ C GD+ +F+ M R V+PD+ + +M
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R +++A+ + G +PD + YT L+ CRK + A L M +GC D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ G C+ +A K+ +M P+ + L+ G C G A + Q
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M K + L+ GF VG +D A + +++ P ++ ++V +C+
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 426 EMEKLGEVLNEIVKVEIK 443
+ + V +E++ IK
Sbjct: 565 HLAEAFRVWDEMISKNIK 582
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 179/404 (44%), Gaps = 49/404 (12%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTY 135
AKE+F R ++TY L+++ + + + ++S V P L F+
Sbjct: 324 AKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR--DVVPDLVCFSS 380
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---HRNYLRPAFDLFKSA 192
++ ++ S D+AL F S+ E P N I +L+ + + A +L
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPD----NVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G + +YN ++ C + A LFN+M ER + PD + IL+ G C+ +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 253 NRAVDLLE-----------------------------------DMLNKGFVPDTLSYTTL 277
A++L + DM++K +P +SY+ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N+LC K L EA+++ M K P ++ N+++ G+CR G A D LE M S G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK--GFSPHFSVSHALIKGFCNVGKVDEA 395
+P+ +SY TL+ G + A ++ M + G P ++++ GFC ++ EA
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
VL ++++ G P T+ ++ + + + + + +E+++
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ GV P+ +YN ++ A+ G + A+ L N M +G P V +Y ++ GLC
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + RA ++ +ML G PD+ +Y +LL C+K + E K+ M+ + PD+V
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+++++ F R G A + G +P+ V Y L+ G C +GM VA M
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G + + ++ G C + EA + E+ + P T +++ C +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ E+ ++ + I+ D
Sbjct: 497 QNAMELFQKMKEKRIRLDV 515
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A ++F+ + + F S Y + IL G K +L + + + K + + + TY
Sbjct: 464 ADKLFNEMTERALFPDS---YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + + D A + + M+ P P + ++ L + + +L AF ++
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS-KGHLAEAFRVWDEMISK 579
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ P N M++ +C +G+ S + KM G +PD SY L+ G R+ +++A
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 256 VDLLEDMLNK--GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
L++ M + G VPD +Y ++L+ CR+ +++EA +L +M +G NPD Y ++
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPN 340
GF + +A ++ ++M G P+
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 156/334 (46%), Gaps = 1/334 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA F ++ Q FRH+ ++Y +L+ + + ++ + + +P T F L
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL 190
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L +A+ F FN +P N IL L+ + Y + ++K + G
Sbjct: 191 ICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEW-VYKQMLEDG 249
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P+ +YNI++ G + LF++M G PD +Y IL+ L + ++ A+
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L M G P L YTTL++ L R L L M GC PD+V Y ++ G+
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
G A ++ +M G LPN+ +Y +++ GLC G F A ++ M S+G +P+F
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
V L+ GK+ EA V+ E++K G H
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVH 463
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 167/379 (44%), Gaps = 34/379 (8%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V K++ D +A + +A +P F H+N +I L F+L+ + L +
Sbjct: 92 PFVVNKVLRGLLDSGMAVRFYWWAESRPGFYHNNFAIAYIISLLFVDDNFALLSEFLGRV 151
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH--- 178
+S+ SL+ L+ YA + D ++TF M+ C+ NR + +++ +
Sbjct: 152 RSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCF 211
Query: 179 -------------------------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
N + +L K G P+ + NI
Sbjct: 212 DLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIY 271
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C + + A + KM +G PDV +Y ++ LC + + AV L E+M+ +G
Sbjct: 272 VHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGL 331
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++ L+ LC+ +K+ EA++L RM ++ YN ++ GF R G A K
Sbjct: 332 KPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYK 391
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ M NGC P++V+Y L+ C GM D A+ ++ M G +P + L+KG C
Sbjct: 392 TVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLC 451
Query: 388 NVGKVDEACGVLEELLKAG 406
++D+A + + ++ G
Sbjct: 452 KAHQLDKAFAFVSDHMEVG 470
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY L+ Y + D+A R M P N +L+ L L AF
Sbjct: 403 PDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQ-LDKAFA 461
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G + S NI++ AFC ++ A LF +M +G+ D +Y IL+ GL
Sbjct: 462 FVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLF 521
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
N A +L + MLN VP+ Y +L++LC+ + A K+ +M K +PD V
Sbjct: 522 GIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTV 581
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+NT++ + RA++A + ++M + G P+ +++R ++ GL D+G +A + + M
Sbjct: 582 TFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYM 641
Query: 368 ISKGFSPHFSVSHALI 383
+ G VS LI
Sbjct: 642 MENGIILDRDVSERLI 657
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 110/240 (45%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A+ ++G P+ +YNI++ +C G A L KM GV PD SY I
Sbjct: 386 IEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNI 445
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++GLC+ Q+++A + D + G D +S L+++ CR KK+ A L M KG
Sbjct: 446 LLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKG 505
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y ++ G G + A ++ + M + +PN+ Y ++ LC G F A+
Sbjct: 506 IQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQ 565
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K M K SP + LI + EA + +E+ G P T+ I+ +
Sbjct: 566 KIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGL 625
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 152/388 (39%), Gaps = 40/388 (10%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F L++ ++ + +TP ++ I +SN + + M +F C P N
Sbjct: 211 FDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNI 270
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+ L H N L A + + G P+ +Y ++ C + S A L+ +M R
Sbjct: 271 YVHYLCGH-NRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRR 329
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN-------------------------- 264
G+ PDV + L+ GLC+ +V+ A +L ML
Sbjct: 330 GLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKA 389
Query: 265 ---------KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
G PD ++Y LLN C +A L+ +M++ G NPD YN ++ G
Sbjct: 390 YKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKG 449
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ + A + D G ++VS L+ C + A + M KG
Sbjct: 450 LCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQAD 509
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI G +G + A + +++L P+ + + +++ +C + ++
Sbjct: 510 AVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFW 569
Query: 436 EIVKVEIKGDTRIVEAGIGLEDYLIGKT 463
++ + E+ DT I Y +GK+
Sbjct: 570 QMTQKEVSPDTVTFNTLI----YWLGKS 593
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 7/279 (2%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR---NYLRPAFD 187
S++ LI + + ++A KT M C+P N +L+ H A +
Sbjct: 371 SIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYN----ILLNHYCSIGMTDKAEN 426
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + GV P+ SYNI+++ C + A+ + E G D+ S IL+ C
Sbjct: 427 LIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFC 486
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R +VN A++L ++M KG D ++Y L+N L A +L +M P++
Sbjct: 487 RAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVN 546
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C+ G A K+ M P+ V++ TL+ L A + M
Sbjct: 547 VYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEM 606
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+KG P +I G + GK A + E +++ G
Sbjct: 607 RTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENG 645
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 92/224 (41%)
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+GV YR+L+ G R + + ++ ++M+ G + Y + + +
Sbjct: 154 QGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDL 213
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
K KG Y+ + C+ R ++L DM GC P+ + V
Sbjct: 214 VEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVH 273
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC A + ++ M KG P ++ C+ + EA G+ EE+++ G P
Sbjct: 274 YLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKP 333
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
++ +C +++++ E+ + ++ ++I+ + I A I
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALI 377
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 175/376 (46%), Gaps = 8/376 (2%)
Query: 70 ASQSDPLLAKEIFDYASRQPN----FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
A S P LA +F+ A+ + ++ TY IL+ RA L L
Sbjct: 84 ACGSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTG 143
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTF-RSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
V + ++L+K + E+ D AL E C P N +L+ L ++
Sbjct: 144 LRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSL-CNQGKSGQ 202
Query: 185 AFDLFKSAHKHGVL--PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A DL + + G + P+ +YN ++ F GD++ A LF +M +RG+ PD+ +Y +
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LC+ +++A L M+NKG +PD +Y L+ + +EA ++ M+ +
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V NT++ C+ G+ +A V + M G P++ SY ++ G +G
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
LM+ G +P + LIK + N G +D+A + E+ G PH T++ ++ +C
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442
Query: 423 AGEEMEKLGEVLNEIV 438
+M+ E N+++
Sbjct: 443 RIGKMDDAMEKFNQMI 458
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
DLF G+ P+ ++N++++A+ G + A +FN+M + GV P V +Y ++ L
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR +++ A++ M+++G VPD +Y L+ C L +A +L+ + G DI
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V + +++ C+ GR +DA + + + G P+ V Y L+ G C G + A +
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P+ L+ G+C +G++DE + E+L+ G P + +I+
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 613
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 194/429 (45%), Gaps = 62/429 (14%)
Query: 28 SLIFCYSSSSQESPSS---PEQQQESSISNS---KSPIGSPCRVQKLIASQSDPLLAKEI 81
+LI+ YSS+ Q + E +++S + + + +GS C+ K+ A+++
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE-------ARDV 348
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLID--DILITLKSEHYPVTPSLFTY--LI 137
FD + + + + I+ G A L+D D+ + + + P ++T+ LI
Sbjct: 349 FDTMAMKG---QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD--GIAPDIYTFNVLI 403
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
K YA + D+A+ F M HGV
Sbjct: 404 KAYANCGMLDKAMIIFNEM------------------------------------RDHGV 427
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+ +Y ++ A C G + A FN+M ++GV+PD +Y L+QG C + +A +
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKE 487
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L+ +++N G D + + +++N+LC+ ++ +A + G +PD V YN ++ G+C
Sbjct: 488 LISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYC 547
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
G+ A +V + M S G PN+V Y TLV G C G D + M+ KG P
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI----CAGEEMEKLGEV 433
+ + +I G G+ A E+ ++G A ++ T+ +++ + C E + E+
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667
Query: 434 LNEIVKVEI 442
VK++I
Sbjct: 668 RAMNVKIDI 676
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P +TY LI Y+ + A++ F+ M + P LN ++ L + ++ A
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKY-GKIKEA 345
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+F + G P+ SY IM+ + G + LF+ M G+ PD+ ++ +L++
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+++A+ + +M + G P ++Y T++ +LCR K+ +A + +M +G PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y+ ++ GFC G + A +++ ++ +NG ++V + +++ LC G A+
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
L ++ G P V + L+ G+C VGK+++A V + ++ AG P+ + +V C
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+++ + E+++ IK T
Sbjct: 586 RIDEGLSLFREMLQKGIKPST 606
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P L TY ++A ++ D+A R M+ P N ++ + + + A
Sbjct: 252 IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW-KEA 310
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+FK + +LP+ + N +M + C G I A +F+ M +G PDV SY I++ G
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + DL + ML G PD ++ L+ + L +A + M+ G P
Sbjct: 371 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH 430
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y TV+ CR G+ DA + M G +P+ +Y L+ G C G AK+ +
Sbjct: 431 VVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 490
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+++ G ++I C +G+V +A + + + G P + M++ C
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 550
Query: 426 EMEKLGEVLNEIVKVEIK 443
+MEK V + +V I+
Sbjct: 551 KMEKALRVFDAMVSAGIE 568
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 21/251 (8%)
Query: 182 LRP--AFDLFKSAHKHGVLPNTKSYNIMMRAF--------CFNGDISIAYTLFNKMFERG 231
LRP A DL + G + N + A C +G ++A LFN+ R
Sbjct: 45 LRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGP-ALAVALFNRAASRA 103
Query: 232 VMPDVES-----YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
P V S Y ILM R + A+ +L G D + + LL C K+
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 287 LREAYK-LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG--CLPNLVS 343
EA LL R GC PD+ YN ++ C +G++ A +L M G C P++V+
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVA 223
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y T++ G +G + A + M+ +G P +++ C +D+A L +++
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 404 KAGEAPHEDTW 414
G P D W
Sbjct: 284 NKGVLP--DNW 292
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 141/363 (38%), Gaps = 37/363 (10%)
Query: 112 SLIDDILITLKS-EHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQL 168
++D +I + V P + TY+ I A + D A++ F M++ P
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469
Query: 169 NRILELLVTHRNYLRP----------------------------------AFDLFKSAHK 194
+ +++ TH + L+ A ++F
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ P+ YN++M +C G + A +F+ M G+ P+V Y L+ G C+ +++
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
+ L +ML KG P T+ Y +++ L + A M G + Y+ V+
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G + +A + +++ + ++++ T++ G+ + AK + G P
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+I G V+EA + + AG P +V ++ E+ + G L
Sbjct: 710 CAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 769
Query: 435 NEI 437
++I
Sbjct: 770 SKI 772
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 4/291 (1%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
KLGR I D+ + + V ++ L+ Y ++AL+ F +M+ +P
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAV---VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + LF+ + G+ P+T YNI++ G A
Sbjct: 570 NVVGYGTLVNGY-CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F++M E G+ + +Y I+++GL + + A+ L +++ D ++ T++ + +
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+++ EA L + G P V Y+ ++ +EG +A + M + GC P+
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRL 748
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+V L + A Y+ + + FS + L+ F + G E
Sbjct: 749 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ F+ + N K LN ++ + R + A DLF S + G++P +Y+I
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR-VEEAKDLFASISRSGLVPCAVTYSI 716
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ G + A +F+ M G PD +++ L +K+++ RA L + +
Sbjct: 717 MITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 776
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
F + L+ L++ K RE + L
Sbjct: 777 FSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A F + R F+H T+ +I LGRA + IL+ + ++ LF LI
Sbjct: 137 ALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLI 196
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ Y ++ + A+K F+ M E GV
Sbjct: 197 ESYGKAGIVQEAVKIFQKMKEL------------------------------------GV 220
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ KSY+ + + G +A FN M G+ P +Y +++ G ++ A
Sbjct: 221 ERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKR 280
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++G PD ++Y T++N CR K + EA + MK K P ++ Y T++ G+
Sbjct: 281 FYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYV 340
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH-F 376
RA DA ++ E+M + G PN ++Y TL+ GLCD A+K + M+++ F+P
Sbjct: 341 SVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDN 400
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ L+ C G +D A VL+ +++ + +++ C ++ ++L
Sbjct: 401 SIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLEN 460
Query: 437 IVKVEI 442
+V+ EI
Sbjct: 461 LVEKEI 466
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY-P 127
++ D L E A +PN + TY L+ L A+ IL + + H+ P
Sbjct: 342 VSRADDALRLFEEMKAAGEKPN----DITYSTLLPGLCDAEKLPEARKILTEMVTRHFAP 397
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFN---------------CKP-LPKQLNRI 171
S+F L+ + D A+ ++M+ + CK + Q ++
Sbjct: 398 KDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKL 457
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
LE LV LRP L A +YN++++ C +G A T F ++ ++G
Sbjct: 458 LENLVEKEIILRPQSTLEMEA---------SAYNLIIQYLCNHGQTGKADTFFRQLLKKG 508
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ +V ++ L++G ++ + A ++L+ M +G D SY L+ S K + +A
Sbjct: 509 IQDEV-AFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAK 567
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M G +PD + +V+ +GR A +V+ M G NL ++ L
Sbjct: 568 TALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+G + A + L+++ P F ++L+ C GK A +L+
Sbjct: 628 FMRGHDEEALGRINLLMNCNCPPDF---NSLLSVLCEKGKTTSAFKLLD 673
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 133/350 (38%), Gaps = 44/350 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + +K ++ T +T +IK Y + D AL+ F M
Sbjct: 296 TYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEM 355
Query: 157 LEFNCKP-----------------LPKQLNRILELLVTH------------------RNY 181
KP LP+ + E++ H
Sbjct: 356 KAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGD 415
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-------- 233
L A + K+ + + Y I++ C G A L + E+ ++
Sbjct: 416 LDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLE 475
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+ +Y +++Q LC Q +A +L KG + D +++ L+ ++ A+++
Sbjct: 476 MEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG-IQDEVAFNNLIRGHAKEGNPDLAFEM 534
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L M +G + D Y ++ + +G DA L+ M NG P+ +R+++ L
Sbjct: 535 LKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFA 594
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
G A + M M+ KG + + + +++ G +EA G + L+
Sbjct: 595 DGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLM 644
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF++ K + GV + +SY ++++++ G+ + A T + M E G PD +R +M+
Sbjct: 531 AFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVME 590
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
L +V A ++ ML+KG + +L +L + EA + + C P
Sbjct: 591 SLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPP 650
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D +N+++ C +G+ A K+L+ C SY ++ L G A +
Sbjct: 651 D---FNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAIL 707
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
++ KG + +S LIK G +A +L ++K G+
Sbjct: 708 CKIMEKGGAKDWSSCDDLIKSLNQEGNTKQA-DILSRMIKGGD 749
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 81 IFDYASRQPNFR----HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+F +++ P R H+++ L+L L + + D L ++ P + S F L
Sbjct: 87 LFLFSALSPRLRSRPLHAHAVSLLLRLS---SHADEAMFDALADARAAGLPASSSAFAAL 143
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ ++ + A++ F M EF +P AF
Sbjct: 144 VAAHSSAGRNADAVQAFSRMDEFQSRP--------------------TAF---------- 173
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
YN +++A +G I +A L+N+M G P+ +Y +LM GLC++ A+
Sbjct: 174 ------VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDAL 227
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ ++ML++G +P+ YT LL+SLC K+ EA +LL MK KGC PD V YN + G
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ GR +A + L + G L Y L+ GL FD Y + M+ + SP
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+ +I+G G++++A L+ + K G P + ++ +C ++E+ + +E
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 437 IVKVEIKGDT 446
+++ + D+
Sbjct: 408 MLQNNLVLDS 417
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 154/352 (43%), Gaps = 7/352 (1%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
++S +D + + D +R S+S + L+ A + D + + + +
Sbjct: 113 LSSHADEAMFDALAD--ARAAGLPASSSAFAALVAAHSSAGRNA--DAVQAFSRMDEFQS 168
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P+ F Y ++K +S + AL + M+ C P N +++ L + A
Sbjct: 169 RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLC-KQGMAGDAL 227
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F G++PN K Y +++ + C G I A L M ++G +PD +Y + GL
Sbjct: 228 KMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +VN A L + + GF Y+ L++ L + ++ E + M + +PD+
Sbjct: 288 CKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDV 347
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V Y ++ G GR DA L+ M G +P+ Y T++ LCD G + A
Sbjct: 348 VLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+ + +I G C G VDEA + +E+ + G P T+ ++
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 157/332 (47%), Gaps = 19/332 (5%)
Query: 118 LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT 177
L+ L+ + + ++ LI ++ D +++MLE N P L I+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP-DVVLYTIMIRGCA 358
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ A K G +P+T YN +++ C +GD+ A+TL ++M + ++ D
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ I++ GLC++ V+ A+ + ++M G P ++Y L++ R+ +L EA L +M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478
Query: 298 KVKGCNP--------------DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ G NP D +V C+ G+ + A K+L + +G +P++V+
Sbjct: 479 EM-GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ GLC D A + + + KG SP LI G + ++A + + +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++G +P + ++ +C M+KL + +N
Sbjct: 598 QSGSSPSLSIYNSMMRSLC---RMKKLSQAIN 626
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 27/306 (8%)
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-----------LLVTHRNYL 182
T +I + L D A++ F M E C P N +++ ++ H+ +
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 183 RPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
LF + + +++S ++ C +G + AY L + + GV+PDV +Y
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++ AV L +++ KG PD ++Y TL++ L R + +A L + G
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLED-MPSNGCLPNLVSYRTLVGG---LCDQGMF 357
+P + YN+++ CR + A + D +P P V L + D +
Sbjct: 601 SSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFP--VESEVLANAHKEIEDGSLD 658
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D ++ +++ G+ + LI G C V + D+A + L + G + I
Sbjct: 659 DGVRELIKIDQEYGYISSNPYTIWLI-GLCQVRRTDDALRIFHTLQEFG--------IDI 709
Query: 418 VPQICA 423
P CA
Sbjct: 710 TPACCA 715
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 1/284 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++S+ Y +T +I Y + + +RA M E P +++ N
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++R A++L K G PN +YN ++ C G + AY L NK+ G+ D +Y
Sbjct: 416 FVR-AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYT 474
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
ILM CR++ NR++ ML GF PD SYTTL+++ CR+K+++E+ +L
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSL 534
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P Y +++ G+CR G A K+ + M ++GC P+ ++Y L+ GLC + D A
Sbjct: 535 GLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+ M+ KG SP L +C A VL+ L K
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 138/253 (54%), Gaps = 1/253 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G + + + +++ AFC G ++ F KM E G+ P+V ++ L+ GLC++ +
Sbjct: 252 ERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIK 311
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTV 312
+A +LLE+M+ +G+ P+ ++TTL++ LC+K +A++L ++ + G P++ Y +
Sbjct: 312 QAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAM 371
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C+E + A +L M G +PN +Y TL+ G C G F A + M LM +GF
Sbjct: 372 INGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF 431
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP+ +A+I G C G +DEA +L ++ G T+ +++ C + +
Sbjct: 432 SPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLV 491
Query: 433 VLNEIVKVEIKGD 445
N+++KV D
Sbjct: 492 FFNKMLKVGFTPD 504
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 166 KQLNRILELLVTH---RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
++ N +++ +V + L+ A ++ G++P+T++ N ++ G + IA
Sbjct: 151 ERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAEN 210
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F +M +RGV PD S+++++ C +V A L M+ +GF+ D + T ++++ C
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFC 270
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+K + +M G P+++++ ++ G C++G A ++LE+M G PN+
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330
Query: 343 SYRTLVGGLCDQGMFDVA-KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
++ TL+ GLC +G + A + +++L+ S G+ P+ A+I G+C K++ A +L
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ + G P+ +T+ ++ C
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHC 411
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 37/343 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF-KS 191
FT LI + +A + M+ KP +++ L + + AF LF K
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC-KKGWTEKAFRLFLKL 355
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G PN +Y M+ +C ++ A L ++M E+G++P+ +Y L+ G C+
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN-------- 303
RA +L++ M +GF P+ +Y +++ LC+K L EAY+LL ++ V G
Sbjct: 416 FVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475
Query: 304 ---------------------------PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
PDI Y T++ FCR+ + ++ ++ E+ S G
Sbjct: 476 LMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLG 535
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+P +Y +++ G C G +A K Q M + G +P ALI G C K+D+A
Sbjct: 536 LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDAR 595
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ + ++ G +P E T + + + C ++ VL+ + K
Sbjct: 596 NLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ Y+ F + G+ PN ++ ++ C G I A+ L +M RG P+V
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
++ L+ GLC+K +A L ++ + G+ P+ +YT ++N C++ KL A LL R
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ +G P+ Y T++ G C+ G + A ++++ M G PN+ +Y ++ GLC +G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A + + + G L+ C + + ++LK G P ++
Sbjct: 451 LDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTT 510
Query: 417 IVPQICAGEEMEKLGEVLNEIVKV 440
++ C ++M++ + E V +
Sbjct: 511 LISTFCRQKQMKESERLFEEAVSL 534
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+S + NK ER E + ++ ++ AV+++ +M N+G VP T +
Sbjct: 139 VSATALIGNKNLERAN----EVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNC 194
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L+ + A + M +G +PD V + +V+ C GR ++A + L M G
Sbjct: 195 VLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERG 254
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+ + + ++ C +G + Y M+ G +P+ ALI G C G + +A
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+LEE+++ G P+ T ++ +C EK + ++V+
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ HG P++ +Y ++ C + A L++ M ++G+ P + L
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
C+K + A+++L+ + + ++ + TL+ LC + KL A
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMA 661
>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 189/436 (43%), Gaps = 66/436 (15%)
Query: 21 TFPPKTPSLIFCYSSSS----------QESPSSPEQQQESSISNSKSPIGSPCR-VQKLI 69
+ PKTP + + +++ Q SP++ E+ NS +PI + V +I
Sbjct: 13 SIKPKTPKISTLHFATTSLGEKLDAHLQNSPNNVEKTL-----NSLAPIKLDTKYVNDII 67
Query: 70 --ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
S ++ L F +A QPN+RH+ Y + +I D++ T K E
Sbjct: 68 HRWSLNNLQLGLRFFIWAGDQPNYRHNLYIYNKACSLFKIKQNPQVILDLIETYKLEKCV 127
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
V F ++++ L D AL + M EFN +P
Sbjct: 128 VCVDTFKVVLRLCKAGGLADEALMVLKKMPEFNIRP------------------------ 163
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+T +YN+++R+ C GD+ +A L +M + PD+ +Y +++G C
Sbjct: 164 ------------DTTAYNVVIRSLCEKGDVDMAKKLMGEMGLIDLYPDMITYVSMIKGFC 211
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--CNPD 305
++ A L M G P+ ++Y+ LL+ +CR + A++LL M+ +G C P+
Sbjct: 212 DVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRFGIVERAFELLAEMEKQGEGCCPN 271
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y +V+ FC +GR DA VLE M GC PN V+ + G+C G +++
Sbjct: 272 VITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRVTASAWINGICTNGQLQDVYNFIE 331
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG- 424
+++ G +L+ + KV+EA L +G P M++ +IC+
Sbjct: 332 RIVAGGSVSIGDCYSSLVVCLIKIKKVEEAEKTFRRALSSGMKPDSLACSMMIREICSEK 391
Query: 425 ---------EEMEKLG 431
EE+EK G
Sbjct: 392 RVLDGFCLYEEVEKTG 407
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 236 VESYRILMQGLCRKSQV-NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
V++++++++ LC+ + + A+ +L+ M PDT +Y ++ SLC K + A KL+
Sbjct: 130 VDTFKVVLR-LCKAGGLADEALMVLKKMPEFNIRPDTTAYNVVIRSLCEKGDVDMAKKLM 188
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + PD++ Y +++ GFC GR +A + M +GC PN+V+Y L+ G+C
Sbjct: 189 GEMGLIDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSALLDGICRF 248
Query: 355 GMFDVAKKYMQLM--ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G+ + A + + M +G P+ ++I+ FC G+ +A VLE + G AP+
Sbjct: 249 GIVERAFELLAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELMEVRGCAPNRV 308
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIV 438
T + IC +++ + + IV
Sbjct: 309 TASAWINGICTNGQLQDVYNFIERIV 334
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 145/271 (53%), Gaps = 1/271 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF +K GV PN + N ++ C +G I+ A FN+M +G+ + +Y
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++ C + + +A++L ++ML G PD + Y TL++ L + KL A +L +MK G
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PDIV +N ++ GFCR+ + +A ++L++M + G P+ V+Y TL+ G F A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA-PHEDTWVMIVPQ 420
+ M+ M+ +G P ALI +C G +DEA + ++ + P+ + +++
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+C +++ +++++ +K +T A
Sbjct: 672 LCRKNQVDLALSLMDDMKVKGVKPNTNTFNA 702
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 165/346 (47%), Gaps = 13/346 (3%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ LGRA+ F ++ +L +K + P++ T+ LI + D AL+ F M
Sbjct: 311 LLTALGRAREFKRMNTLLAEMK--EMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 159 -----FNCKPLPKQLNRILELL--VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
F +P N +++ L V + + +S + +PNT +YN ++ +
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPR--CMPNTVTYNCLIDGY 426
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C I A LF++M + GV P+V + L+ G+C+ ++N AV+ +M KG +
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++YT L+ + C + +A +L M GC+PD + Y T++ G + G+ A VL
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G P++VS+ L+ G C + D A + ++ M + G P + LI F G
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
A ++++++K G P T+ ++ C +++ ++ ++
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 152/339 (44%), Gaps = 39/339 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ TY LI Y ++++ + A + F M + P LN +++ + H + A +
Sbjct: 414 PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKH-GRINGAVE 472
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG---------------- 231
F G+ N +Y ++RAFC +I A LF++M E G
Sbjct: 473 FFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLS 532
Query: 232 -------------------VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
PD+ S+ +L+ G CRK++++ A ++L++M N G PD +
Sbjct: 533 QAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGV 592
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y TL++ + A++L+ +M +G P +V Y ++ +C G +A K+ DM
Sbjct: 593 TYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Query: 333 PSNGCL-PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
S + PN V Y L+ LC + D+A M M KG P+ + +A+ KG
Sbjct: 653 SSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNW 712
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
+ +A +++ + + P T ++ + A E KL
Sbjct: 713 LSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKL 751
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 199/449 (44%), Gaps = 87/449 (19%)
Query: 61 SPCRVQKLIASQSDPLLA---KEIFDYASRQPN--------FRHSNSTYL--------IL 101
SPC Q PLL+ + +F++ASR+PN F+ S S + +L
Sbjct: 114 SPC--------QDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAATLL 165
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPS-----LFTYLIKIYAESNLPDRALKTFRSM 156
I GRA+ ++D+ + + + PS + LI + D AL M
Sbjct: 166 IRCFGRAQ---MVDESFLV----YNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEM 218
Query: 157 LEFNCK-PLPKQLNRILELLVTHRNYLRPAFD------LFKSAHKHGVLPNTKSYNIMMR 209
L+ + P I+ ++ R+ + A D L +H V PN+ ++
Sbjct: 219 LQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLIS 278
Query: 210 AFCFNGDISIAY-----------------------------------TLFNKMFERGVMP 234
C +G A+ TL +M E + P
Sbjct: 279 RLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQP 338
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDM---LNKGFV--PDTLSYTTLLNSLCRKKKLRE 289
+V ++ IL+ LC+ +V+ A+++ E M + GF+ PD ++Y TL++ LC+ + E
Sbjct: 339 NVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398
Query: 290 AYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
L+ RM+ + C P+ V YN ++ G+C+ A ++ + M +G PN+V+ TLV
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G+C G + A ++ M KG + ALI+ FCNV +++A + +E+L+AG +
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P + ++ + ++++ VL+++
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKM 547
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 166/364 (45%), Gaps = 12/364 (3%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDI----LITLKSEHYPVTPSLF-TYLIKIYAESNLPD 147
+SN+ +++ R K +D+ L++ +EH S++ T LI S D
Sbjct: 228 NSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTD 287
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA +++ N +L L R + R L + + PN ++ I+
Sbjct: 288 RAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMN-TLLAEMKEMDIQPNVVTFGIL 346
Query: 208 MRAFCFNGDISIAYTLFNKMF---ERG--VMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+ C + A +F KM G V PDV +Y L+ GLC+ + + L+E M
Sbjct: 347 INHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM 406
Query: 263 LNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
++ +P+T++Y L++ C+ + A +L +M G P++V NT+V G C+ GR
Sbjct: 407 RSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR 466
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A + +M G N V+Y L+ C+ + A + M+ G SP V +
Sbjct: 467 INGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYT 526
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
LI G GK+D A VL ++ +AG +P ++ +++ C ++++ E+L E+
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG 586
Query: 442 IKGD 445
IK D
Sbjct: 587 IKPD 590
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 35/268 (13%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKP-------------LPKQLNRI-------- 171
+T LI+ + N ++A++ F MLE C P +L+R
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 172 ----------LELLVT---HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+L+ +N L A+++ K G+ P+ +YN ++ F GD S
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTL 277
A+ L KM + G++P V +Y L+ C ++ A+ + DM + V P+T+ Y L
Sbjct: 609 TAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+NSLCRK ++ A L+ MKVKG P+ +N + G + A ++++ M + C
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHAC 728
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
P+ ++ L L G K ++Q
Sbjct: 729 NPDYITMEILTEWLSAVGETAKLKSFVQ 756
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI + FS ++ + E + P++ TY LI Y + D A+K FR
Sbjct: 593 TYNTLISHFSKTGDFSTAHRLMKKMVKE--GLVPTVVTYGALIHAYCLNGNLDEAMKIFR 650
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + P + IL + +N + A L GV PNT ++N M +
Sbjct: 651 DMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEK 710
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+S A+ L ++M E PD + IL + L
Sbjct: 711 NWLSKAFELMDRMTEHACNPDYITMEILTEWL 742
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 39/386 (10%)
Query: 61 SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP V +++ + S+ +LA F +A RQ FR+S + LI LG+ K F L+ ++
Sbjct: 119 SPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVE 178
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
++ ++ F +++ YA + A++TF M F K N ++++L +
Sbjct: 179 AMRCRSC-LSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSK 237
Query: 180 NYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ A +FK + G +P+ K+Y ++M + D+ + ++ +M + G+ PDV +
Sbjct: 238 Q-VKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVA 296
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL----------------- 281
Y +L+ C+ + + A+ + +M G +P Y L+N L
Sbjct: 297 YGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSK 356
Query: 282 ------------------CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
CR + A+K++ M+ G P+ Y+ ++ + +
Sbjct: 357 ESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIE 416
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A + + M +GC P L +Y +VG C D+A K + M KG P + ALI
Sbjct: 417 EAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALI 476
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAP 409
G C +++EAC +E+L G P
Sbjct: 477 NGLCFDNRLEEACVYFQEMLDKGIRP 502
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 5/290 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A IF R+ F TY +L+ G K ++ + + + P + Y
Sbjct: 242 AHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAG--IKPDVVAYGM 299
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI + +S D A+K F M E C P P ++ L + L A F+ + +
Sbjct: 300 LISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER-LDEALKYFQLSKES 358
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G + N ++ A+C + A+ + ++M + G+ P+ +Y I++ L + ++ A
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEA 418
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L + M G P+ +YT ++ C +++ A K+ +MK KG P + ++ ++ G
Sbjct: 419 YNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALING 478
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
C + R +AC ++M G P + L L + G +A++ Q
Sbjct: 479 LCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 3/265 (1%)
Query: 185 AFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A F+ A + G + + ++ ++ A + ++L M R + ++++I++
Sbjct: 137 ALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSK-DTFKIIV 195
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-C 302
+ R +V AV+ E M + G D Y L++ L + K++++A+ + MK KG
Sbjct: 196 RRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRF 255
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+ Y ++ G+ E + V ++M G P++V+Y L+ C G D A K
Sbjct: 256 IPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIK 315
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G P V LI G ++ ++DEA + ++G T ++ C
Sbjct: 316 VFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYC 375
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTR 447
E ++++E+ K I +TR
Sbjct: 376 RALEFHHAFKMVDEMRKSGIGPNTR 400
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S Y +LI LG + K +P+ +I Y + A K
Sbjct: 328 SPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMV 387
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M + P + + IL L+ + A++LF+ + G P +Y +M+ FC
Sbjct: 388 DEMRKSGIGPNTRTYDIILNHLIKSEK-IEEAYNLFQRMERDGCEPELNTYTMMVGMFCS 446
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
N + +A ++ +M E+GV+P + + L+ GLC +++ A ++ML+KG P
Sbjct: 447 NERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQL 506
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKV 299
++ L +L ++ A ++ R+++
Sbjct: 507 FSNLKEALVEGGRITLAQEVTQRLEM 532
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS++ LI++Y + +L+ FR M + P N IL +V + +
Sbjct: 123 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFL 181
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K K + P+ ++NI++ C G + L KM + G P + +Y ++ C+K
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A++LL+ M +KG D +Y L++ LCR ++ + Y LL M+ + +P+ V Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
NT++ GF EG+ + A ++L +M S G PN V++ L+ G +G F A K +M +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
KG +P L+ G C + D A G + + G T+ ++ +C +++
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 430 LGEVLNEIVKVEIKGD 445
+LNE+ K I D
Sbjct: 422 AVVLLNEMSKDGIDPD 437
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 13/356 (3%)
Query: 97 TYLILILKLGR----AKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY +LI L R AK + L+ D+ + P+ TY LI ++ A
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDM------RKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ ML F P N +++ ++ N+ + A +F G+ P+ SY +++
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNF-KEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C N + +A + +M GV +Y ++ GLC+ ++ AV LL +M G PD
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+ L+N C+ + + A +++CR+ G +P+ + Y+T++ CR G +A ++ E
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M G + ++ LV LC G A+++M+ M S G P+ LI G+ N G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +A V +E+ K G P T+ ++ +C G + + + L + V DT
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 6/358 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ +L+ L +A + ++ + + S+ F LI Y S +A F M
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +L+ L +LR A KS H +T YN ++ A C +G+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKG-GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYT 275
++ A +LF +M +R ++PD +Y L+ GLCRK + A+ ++ +G V P+ + YT
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++ + + + + +M G PDIV N ++ G+ R G+ +L +M +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVSHALIKGFCNVGKVD 393
PNL +Y L+ G + DV+ ++ + +I G P H+L+ G C ++
Sbjct: 749 NGGPNLTTYNILLHGYSKRK--DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+L+ + G T+ M++ + CA E+ +++ + + I D +A
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 114/242 (47%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A L K G+ P+ +Y+ ++ FC G A + +++ G+ P+ Y
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ CR + A+ + E M+ +G D ++ L+ SLC+ K+ EA + + M
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+ V ++ ++ G+ G + A V ++M G P +Y +L+ GLC G A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+K+++ + + + + + L+ C G + +A + E+++ P T+ ++
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 421 IC 422
+C
Sbjct: 658 LC 659
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 5/234 (2%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N Y+I++R + G I + +F M G P V + ++ + + + L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++ML + PD ++ L+N LC + ++ L+ +M+ G P IV YNTV+ +C++
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKGFSPHFS 377
GR A ++L+ M S G ++ +Y L+ LC +AK Y+ L M + P+
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN--RIAKGYLLLRDMRKRMIHPNEV 299
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKL 430
+ LI GF N GKV A +L E+L G +P+ T+ +I I G E L
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A ++++ G + ++N+++ + C G ++ A M G++P+ S+
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G + +A + ++M G P +Y +LL LC+ LREA K L +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ------- 354
D V YNT++ C+ G A + +M LP+ +Y +L+ GLC +
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 355 ------------------------GMFDVAKK-----YMQLMISKGFSPHFSVSHALIKG 385
GMF + + + M + G +P ++A+I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +GK+++ +L E+ P+ T+ +++
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C + LNR HR + + + K G+ P ++ Y ++ C GDI A
Sbjct: 862 CDAMVSVLNR------NHR--FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + +M + P + +++ L + + + A LL ML VP S+TTL++
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C+ + EA +L M G D+V YN ++ G C +G A ++ E+M +G L N
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 341 LVSYRTLVGG-LCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+Y+ L+ G L + F A ++ ++++GF S+S
Sbjct: 1034 ATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ + D+S ++ L+ + G++PD + L+ G+C + + + +
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ + +G D ++ L++ C ++ A+ L+ M G + D + +V R
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R ++ VL +M G P Y L+ GLC G A + MI+ P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA-GEEMEKL 430
A+++ GK DEA +L +LK P ++ ++ C G +E L
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRPAF 186
P+L TY I ++ S D + +RS++ N LP +L L L + N L
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSII-LN-GILPDKLTCHSLVLGICESNMLEIGL 809
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL----------------------- 223
+ K+ GV + ++N+++ C NG+I+ A+ L
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 224 ------------FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
++M ++G+ P+ Y L+ GLCR + A + E+M+ P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ + ++ +L + K EA LL M P I + T++ C+ G I+A ++
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
M + G +LVSY L+ GLC +G +A + + M GF + + ALI+G
Sbjct: 990 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 45/352 (12%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
K FS+ D++ K H+P + FTY L+K + A K +S+
Sbjct: 561 KAFSVFDEMT---KVGHHP---TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA------ 220
N +L + N L A LF + +LP++ +Y ++ C G IA
Sbjct: 615 MYNTLLTAMCKSGN-LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Query: 221 -------------YTLF-NKMFERGVM----------------PDVESYRILMQGLCRKS 250
YT F + MF+ G PD+ + ++ G R
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ + DLL +M N+ P+ +Y LL+ ++K + ++ L + + G PD + +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++VLG C K+L+ G + ++ L+ C G + A +++M S
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G S A++ + E+ VL E+ K G +P ++ ++ +C
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 65/145 (44%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CN + Y+ ++ + REG D+ ++ M G P++ + ++G + G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ M+ + P + + LI C G +++ +++++ K+G AP T+ ++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C + E+L+ + + D
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADV 263
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 181/380 (47%), Gaps = 16/380 (4%)
Query: 73 SDPLLAKEIFDYASRQP------------NFR--HSNSTYLILILKLGRAKYFSLIDDIL 118
+DPL+A E+ + P NF H STY +LI L + L++ ++
Sbjct: 57 NDPLVAFEVIKRLNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVI 116
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++S+ + + + +L+ +A++ D A K + + N +L LV
Sbjct: 117 GYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKG 176
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
F LFK PNT ++NI++R C G++ + LFN M G +PDV +
Sbjct: 177 GKVHEAIF-LFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVT 235
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ GLC+ ++++RA DLL+++ ++ PD ++YT++++ + KL A L M
Sbjct: 236 YNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEM 295
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P +V +N ++ GF + G + A + E M S C+P++V++ +L+ G C G
Sbjct: 296 IRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDI 355
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ K +M ++ SP+ +I C ++ EA +L +L + P + +
Sbjct: 356 RLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPV 415
Query: 418 VPQICAGEEMEKLGEVLNEI 437
+ C +++ ++ E+
Sbjct: 416 IDGFCKAGNVDEANVIVTEM 435
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 2/290 (0%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
H P F LI+ ++ + F +M F C P N ++ L N L
Sbjct: 193 HSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGL-CKANELDR 251
Query: 185 AFDLFKSAH-KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A DL K ++ P+ +Y ++ F G + A LF +M G+ P V ++ +L+
Sbjct: 252 ACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLI 311
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G + + A + E M + +PD +++T+L++ CR +R K+ MK + +
Sbjct: 312 DGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVS 371
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P+I Y+ ++ C++ R +A +L + + P Y ++ G C G D A
Sbjct: 372 PNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVI 431
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ M K P LI G C G++ EA + +++L G AP T
Sbjct: 432 VTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNIT 481
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 1/303 (0%)
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M + C P + I++ + ++ A ++ +G+ PN YN +++
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHH-EVANEILSRMPSYGLKPNVVCYNTVLKG 310
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C A L +M+++ D ++ IL+ C+ V+R ++LLE ML G +PD
Sbjct: 311 ICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 370
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++YTT++N C++ + EA LL M GC P+ + Y V+ G C R +DA +++
Sbjct: 371 VITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMS 430
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M GCLPN V++ T++ LC +G+ + A + ++ M+ G +P +I G G
Sbjct: 431 RMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAG 490
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
K +EA +L ++ G P+ T+ + + ++K+ ++ + I I+ D +
Sbjct: 491 KTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYN 550
Query: 451 AGI 453
A I
Sbjct: 551 AVI 553
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 77 LAKEIFDYASRQPNF--RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFT 134
+A EI SR P++ + + Y ++ + A + +++L + ++ P+ F
Sbjct: 284 VANEIL---SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFN 340
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
L+ + ++ L DR ++ MLE C P ++ + A L K+
Sbjct: 341 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC-KEGLIDEAVMLLKNMPS 399
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G PNT SY I+++ C A L ++M ++G +P+ ++ ++ LC+K V +
Sbjct: 400 CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQ 459
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A++LL+ ML G PD +SY+T+++ L + K EA +LL M KG P+++ Y+++
Sbjct: 460 AIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAF 519
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
REGR ++ +++ + V Y ++ LC + D+A ++ M+S G P
Sbjct: 520 ALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMP 579
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEEL 402
+ S ALIKG + G + EA +L EL
Sbjct: 580 NESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 155/306 (50%), Gaps = 3/306 (0%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
+ TP + Y +I + + A + M + KP N +L+ + + +
Sbjct: 259 QHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWE 318
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ A +L ++ + ++NI++ FC NG + L +M E G MPDV +Y +
Sbjct: 319 K-AEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 377
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C++ ++ AV LL++M + G P+T+SYT +L LC ++ +A +L+ RM +GC
Sbjct: 378 INGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGC 437
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P+ V +NT++ C++G A ++L+ M NGC P+L+SY T++ GL G + A +
Sbjct: 438 LPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE 497
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ +MI+KG +P+ ++ G++D+ + + + A + ++ +C
Sbjct: 498 LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLC 557
Query: 423 AGEEME 428
E +
Sbjct: 558 KRRETD 563
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 151/326 (46%), Gaps = 15/326 (4%)
Query: 127 PVTPSLFTY---LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
PV P+ +TY + + + D AL M +C P+P + I+E Y
Sbjct: 111 PVPPNAYTYFPVVRGLCGRGRIAD-ALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY-S 168
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + ++ H G +T + N+++ A C G + + K+ G D+ SY ++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228
Query: 244 QGLCRKSQVNRAVDLLEDML----------NKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+GLC + +L+++M+ G PD Y T+++ +C++ A ++
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
L RM G P++V YNTV+ G C R A ++L +M C + V++ LV C
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
G+ D + ++ M+ G P +I GFC G +DEA +L+ + G P+ +
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVK 439
+ +++ +C+ E E+++ +++
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQ 434
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++ LC + AV L+ N V D Y ++ CR ++ A +L + V
Sbjct: 58 LIRSLCVAGRTADAVRALDAAGNAAGVVD---YNAMVAGYCRVGQVEAARRLAAAVPVP- 113
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ Y VV G C GR DA VL++M S C+P Y ++ C G + A
Sbjct: 114 --PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ + +KG + + +I C+ G VDE +L +L G ++ ++ +
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231
Query: 422 CAGEEMEKLGEVLNEIVKV 440
CA + + E+++E+VKV
Sbjct: 232 CAAKRWGDVEELMDEMVKV 250
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 138/256 (53%), Gaps = 5/256 (1%)
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-PDVESYRILMQGLCRKS 250
A + G +YN +M F +G + A LF + GV PDV S+ ++++G+C+
Sbjct: 189 ASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVG 248
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHY 309
V +A++L+E M G PDT+++ L+N LCR K++ + ++L R++ G C P++V Y
Sbjct: 249 DVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTY 308
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
+V+ G+C+ GR DA V DM + G PN+V+Y L+ G G A Q MI
Sbjct: 309 TSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMIL 368
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ P +LI G+C G++D+A + E+ + P+ T+ +I+ C + +
Sbjct: 369 RRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFC---KQNR 425
Query: 430 LGEVLNEIVKVEIKGD 445
GE L+ + K+ ++ D
Sbjct: 426 SGEALHFLKKMNMRTD 441
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 155/334 (46%), Gaps = 39/334 (11%)
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVL-PNTKSYNIMMRAFCFNGD 216
+F C N++++L + H ++ A LF+ + GV P+ S+N++++ C GD
Sbjct: 191 QFGCSIEAYAYNKLMDLFIGH-GRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGD 249
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF-VPDTLSYT 275
+ A L +M E G PD ++ IL+ GLCR +V++ ++L + G +P+ ++YT
Sbjct: 250 VQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYT 309
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++++ C+ ++ +A + M G +P++V YN ++ G+ + G A V + M
Sbjct: 310 SVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILR 369
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP--------------------- 374
CLP++V++ +L+ G C G D A K M P
Sbjct: 370 RCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEA 429
Query: 375 -HF--------------SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
HF + + +I C GKVDEA +L E+ + G P + T+ +++
Sbjct: 430 LHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILII 489
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C + + +++V+ D+ +V + I
Sbjct: 490 GHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFI 523
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 5/285 (1%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P ++++ + I + D +AL+ M EF C P N ++ L + +
Sbjct: 231 SPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSK-GR 289
Query: 187 DLFKSAHKHGV-LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ + + GV +PN +Y ++ +C G + A ++N M G P+V +Y +L+ G
Sbjct: 290 EVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLING 349
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + AV + + M+ + +PD +++++L++ CR +L +A K+ M P+
Sbjct: 350 YGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPN 409
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ ++ FC++ R+ +A L+ M P Y ++ LC G D A +
Sbjct: 410 AHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMIL 469
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M KG P LI G C G++ EA ++++ G +P
Sbjct: 470 IEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSP 514
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PN +YN+++ + G++ A ++ +M R +PDV ++ L+ G CR Q++ A
Sbjct: 335 GTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDA 394
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVL 314
+ + +M P+ ++ ++++ C++ + EA L +M ++ P YN V+
Sbjct: 395 MKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVID 454
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ G+ +A +L +M GC P+ +Y L+ G C +G A + M+ G SP
Sbjct: 455 VLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSP 514
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
V ++ I G E ++ +++ +W
Sbjct: 515 DSIVVNSFISCLLKSGMPGE----VDHIMRIAAGGASSSW 550
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 122/263 (46%), Gaps = 5/263 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
T+ IL+ L RAK S ++L L+ + P++ TY +I Y ++ + A+ +
Sbjct: 271 THNILVNGLCRAKEVSKGREVLRRLQRDGV-CMPNVVTYTSVISGYCKAGRMEDAMAVYN 329
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P N ++ N + A +++ LP+ +++ ++ +C
Sbjct: 330 DMVAVGTSPNVVTYNVLINGYGKAGN-MGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRC 388
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM-LNKGFVPDTLS 273
G + A ++ +M + + P+ ++ I++ C++++ A+ L+ M + P
Sbjct: 389 GQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFI 448
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +++ LC+ K+ EA +L M+ KGC PD Y +++G C +GR +A M
Sbjct: 449 YNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMV 508
Query: 334 SNGCLPNLVSYRTLVGGLCDQGM 356
GC P+ + + + L GM
Sbjct: 509 ETGCSPDSIVVNSFISCLLKSGM 531
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK- 265
+ A C + + + L + + + P SYR ++ +C+ + A+ L + M ++
Sbjct: 98 LRHAPCASSTLHLFSALHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQS 157
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G+ P+ + L S L A LL + GC+ + YN ++ F GR DA
Sbjct: 158 GYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDA 217
Query: 326 CKVLEDMPSNGCL-PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+ E G P++ S+ ++ G+C G A + ++ M G SP + L+
Sbjct: 218 VALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVN 277
Query: 385 GFCNVGKVDEACGVLEELLKAGEA-PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
G C +V + VL L + G P+ T+ ++ C ME V N++V V
Sbjct: 278 GLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAV 334
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 8/350 (2%)
Query: 100 ILILKLGRAKY-FSLIDDILITLKSE--HYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+L+L L RA D L+ +S H P T S+ L + + D A K FRS
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRV-DLAEKAFRSA 182
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P N ++ L LR A D+ K G+ P+ +YN ++ +C G
Sbjct: 183 LRRRVSPDIYTFNTVISGLC-RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG 241
Query: 217 ISIAY---TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
Y L +M E G+ P ++ +L+ G C+ S AV + E+M +G ++
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +L++ LC + K+ E KL+ M+ G +P+ + + V+ GFC++G DA ++ M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
P++V Y L+ G + A + M KG SP+ + + LI GF G
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
A G+L+E+ + G T+ +++ +C E+ K ++L+E+ +V ++
Sbjct: 422 SASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 158/362 (43%), Gaps = 12/362 (3%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLID 115
I CR+ +L + +AK+I + S +TY LI K G A +D
Sbjct: 198 ISGLCRIGQLRKAGD---VAKDIKAWG-----LAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + T F LI Y +++ A++ F M + N ++ L
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + L + G+ PN ++ +++ FC G ++ A + M ER V PD
Sbjct: 310 CSE-GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y IL+ R ++ A+ + E M KG P+ +Y L+ R R A LL
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
MK KG D+V YN ++ C +G A K+L++M G PN ++Y T++ G CD+G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + M + + IK FC +GK+DEA +L E+L P+ T+
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548
Query: 416 MI 417
I
Sbjct: 549 TI 550
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 6/324 (1%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFN--CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
L+ A ++ P RA F E + +P +N +L LV + + A F+SA
Sbjct: 125 LVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKR-VDLAEKAFRSAL 183
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ V P+ ++N ++ C G + A + + G+ P V +Y L+ G C+K
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243
Query: 254 RA--VD-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
VD LL++M+ G P +++ L+N C+ A ++ MK +G +V YN
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ G C EG+ + K++E+M G PN +++ ++ G C +GM A ++ M +
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
P + + LI + +GK+++A V E + K G +P+ T+ ++ +
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423
Query: 431 GEVLNEIVKVEIKGDTRIVEAGIG 454
+L+E+ + I+ D IG
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIG 447
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E ++P+ T+ ++K + + + A M E N +P N ++++
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY-RRLGK 384
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + ++ K G+ PN +YN ++ F +GD A L ++M E+G+ DV +Y +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC K +V +AV LL++M G P+ L+Y T++ C K ++ AY++ RM+
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++V YN + FC+ G+ +A +L +M +PN ++Y T+ G+ ++G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + A D + V P+ YNI++ + G + A + M ++G+ P+V +
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G R A LL++M KG D ++Y L+ +LC K ++R+A KLL M
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+ + YNT++ GFC +G A ++ M N+V+Y + C G D
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIK 384
A + M+ K P+ +++ IK
Sbjct: 527 EANDLLNEMLDKCLVPN-GITYETIK 551
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 152/286 (53%), Gaps = 1/286 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI +S +RA+ F M+E +P +++ + +L+ AF L
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC-NEGHLQCAFRLLHLM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G++PN ++++++ A C + A + ++GV + Y L+ GLC+ ++
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L++ M+++GFVPD SY++L++ LCR+KKL +A +L M KG V Y +
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ RE + K+ + M + G P++V+Y V C++G + A+ + M+ +G
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P+ + LI+G+ N+G V +A E ++ G P+ED++ +++
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G PN YN ++ +C G++ A +F M P+V +Y L+ GLC+ +V R
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ L M+ G P+ ++YT L+ C + L+ A++LL M+ G P+ ++ ++
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ + +A L + G N V Y +L+ GLC G D A + MQ MIS+GF P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+LI G C K+ +A +LE++++ G T+ +I+ ++ E ++
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445
Query: 435 NEIVKVEIKGD 445
++++ I D
Sbjct: 446 DKMIATGINPD 456
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 135/320 (42%), Gaps = 46/320 (14%)
Query: 163 PLP--KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP--NTKSYNIMMRAFCFNGDIS 218
PLP + LN +L L HR + P + S +P N ++Y ++ A+C GDI
Sbjct: 37 PLPPLRCLNTLLMALARHRMF--PDMESLASR-----MPARNLRTYTTLINAYCLAGDIP 89
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A + G+ PD +Y + G CR + A + M +G + +YT LL
Sbjct: 90 AAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALL 149
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPD--------------------------------- 305
+ L +REA + M+ C PD
Sbjct: 150 HGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209
Query: 306 --IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
IV YN ++ G+C G A KV E M N C PN+ +Y L+ GLC G + A
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M+ G P+ ALI+G CN G + A +L + G P++ T+ +++ +C
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 424 GEEMEKLGEVLNEIVKVEIK 443
E++E+ L +VK +K
Sbjct: 330 REKVEEAQLFLGSLVKKGVK 349
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H + P + Y + Y + + A + F M C +L L+ +
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG-AGMV 158
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A +F P+T Y M+ C G A L + G P++ Y L
Sbjct: 159 REAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++ A+ + E M P+ +YT L++ LC+ K+ A L RM G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V Y ++ G C EG A ++L M +NG +PN ++ L+ LC + + A+
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ ++ KG + V +LI G C GK+D A ++++++ G P ++ ++ +C
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 423 AGEEMEKLGEVLNEIVKVEIKG 444
+++ + +L ++++ I+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQA 420
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 162/392 (41%), Gaps = 31/392 (7%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
S I C+ K+ A+ D L+ K I + F +Y LI L R K S
Sbjct: 357 SLIDGLCKTGKIDAA--DELMQKMISE------GFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L + + +P +T +I + K F M+ P I+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP------DIVTYTV 462
Query: 177 THRNY-----LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
R+Y + A + GV PN +YN ++R + G +S A++ F M +G
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVD------------LLEDMLNKGFVPDTLSYTTLLN 279
P+ +SY +L++ + +KS + +VD LLED+ + Y+ +
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LCR +L EA M+ P Y +++ CR DA +L+ M +G LP
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLP 642
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+L SYR ++ LC+ G F AK+ ++ K + V LI G G V E +L
Sbjct: 643 HLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLL 702
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
+ + G P MI +I E++++
Sbjct: 703 SVMKEHGYQPSNTINAMITGEITVTNEVQEIA 734
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 19/328 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LI ++++ + +A M+ C+P ++ + + + A
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK-VSVA 578
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE-------- 237
+LF+ G PN +Y ++ +C +G+I A ++ +M +PDV+
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638
Query: 238 --------SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+Y L+ GLC+ +V A DLLE M G P+T+ Y L++ C+ KL E
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDE 698
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +M G NP++ Y++++ ++ R KVL M N C PN+V Y ++
Sbjct: 699 AQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMID 758
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GL D A K M +M KG P+ A+I GF GKVD+ + E+ G AP
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ T+ +++ CA +++ +L E+
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 66/436 (15%)
Query: 66 QKLIASQSDPLLAKEIFDYASRQ------PNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
K+I+ + +E D+ +R PN + TY IL+ K IL
Sbjct: 312 NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQ----TYRILLCGCLNKKQLGRCKRILS 367
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP---------------- 163
+ +E + ++F L+ Y +S+ A K + M + CKP
Sbjct: 368 MMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGG 427
Query: 164 -LP---------KQLNRILE--LLVTHRNYLRPA-----FDLFKSAHK-------HGVLP 199
LP K N +L ++ N + A F F+ A+K +G +P
Sbjct: 428 ELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVP 487
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+T +Y+ ++ C + A+ LF +M GV+PDV +Y IL+ + + +A + L
Sbjct: 488 DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++M+ G P ++YTTL+++ + KK+ A +L M KGC P+++ Y ++ G+C+
Sbjct: 548 DEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607
Query: 320 GRAIDACKVLEDMPSNGCLP----------------NLVSYRTLVGGLCDQGMFDVAKKY 363
G AC++ M + +P N+V+Y LV GLC A+
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
++ M G P+ V ALI GFC K+DEA V ++++ G P+ T+ ++ ++
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFK 727
Query: 424 GEEMEKLGEVLNEIVK 439
+ ++ + +VL+++++
Sbjct: 728 DKRLDLVLKVLSKMLE 743
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A DL ++ G PNT Y+ ++ FC + A +F+KM E G P+V +Y
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSS 720
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ L + +++ + +L ML P+ + YT +++ L + K EAYKL+ M+ KG
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P++V Y ++ GF + G+ ++ +M S GC PN V+Y L+ C G D A
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + H S +I+G+ + + G+LEE+ K G AP + +++
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNF 898
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
+E E+ E++ +
Sbjct: 899 VKAGRLEVALELHKEVISASM 919
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 175/419 (41%), Gaps = 43/419 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V ++++ P L + F +A RQ + H+ + Y+ L+ R Y + ++ L
Sbjct: 137 NPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLRE 196
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV---- 176
++ + V L LI+ + L + AL+ + +F KP N ++++ +
Sbjct: 197 IRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADK 256
Query: 177 ------THRNY------------------------LRPAFDLFKSAHKHGVLPNTKSYNI 206
HR R A L + K +PNT YN
Sbjct: 257 LDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNK 313
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ C A N+M +P+V++YRIL+ G K Q+ R +L M+ +G
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID-- 324
P + +L+++ C+ AYKLL +M+ C P V YN ++ C G
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433
Query: 325 ----ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A K +M S G + N V+ + LC G F+ A K + M+ GF P S
Sbjct: 434 TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYS 493
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+I CN +V+ A + +E+ G P T+ +++ +++ L+E+V+
Sbjct: 494 EVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 552
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 159/369 (43%), Gaps = 11/369 (2%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ +F + Y +I L A +F D L ++S P++ TY I + N
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRST--SCIPNVQTYRILLCGCLNKK 357
Query: 147 D--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
R + M+ C P N ++ ++ A+ L K K P Y
Sbjct: 358 QLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF-SYAYKLLKKMEKCECKPGYVVY 416
Query: 205 NIMMRAFCFNGDI------SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
NI++ + C G++ +A +N+M G + + + + LC + +A +
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ +M+ GFVPDT +Y+ ++ LC ++ A+ L MK G PD+ Y ++ F +
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G A L++M +GC P +V+Y TL+ VA + +LMI+KG P+
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
ALI G+C G +++AC + + + P D + I + + G +++ +
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656
Query: 439 KVEIKGDTR 447
K D R
Sbjct: 657 KAHKVKDAR 665
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 155/348 (44%), Gaps = 5/348 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A D+L T+ + ++ LI + ++ D A + F M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+E P + +++ L + L + ++ PN Y M+
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKR-LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
AY L M E+G P+V +Y ++ G + +V++ ++L +M +KG P+ ++YT
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N C L EAY LL MK + Y V+ G+ RE I + +LE++ NG
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE--FILSLGLLEEVEKNG 883
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS--PHFSVSHALIKGFCNVGKVDE 394
P ++ Y+ L+ G +VA + + +IS S ++ +LI F K+
Sbjct: 884 SAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGH 943
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
A + ++++ G P T+V ++ + E+ ++ + + +++I
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 163/333 (48%), Gaps = 5/333 (1%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRA 149
+ S+ TY LI L + +DD+ + +++E + P++ TY I+ +S + A
Sbjct: 299 KASSFTYNPLITGLLARGFVKKVDDLQLEMENEG--IMPTVVTYNAMIHGLLQSGQIEAA 356
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
F M P N +L N + A LF + G+ P +YNI++
Sbjct: 357 QAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQ-KEALLLFGDLRRAGLAPTVLTYNILID 415
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
+C GD+ A L +M E+G +PDV +Y ILM+G + + ++ML+KG P
Sbjct: 416 GYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRP 475
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D +Y T + + + ++++L + ++G + D V YN ++ G C+ G DA +++
Sbjct: 476 DCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELM 535
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M SNG P+ ++Y L+ C++G A+K+ MIS G P +I +C
Sbjct: 536 MQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRR 595
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G + A G ++L+ G P+E T+ +++ +C
Sbjct: 596 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 628
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKP-------LPKQLNRILELLVTH 178
+ P++ TY I I L D A + M+E C P L K + + L +T
Sbjct: 403 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTR 462
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ F G+ P+ +YN + A GDIS ++ L + G+ D +
Sbjct: 463 --------EFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVT 514
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y IL+ GLC+ + A +L+ M++ G PD ++YT L+++ C + LREA K M
Sbjct: 515 YNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMI 574
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P V Y ++ +CR G A M G PN ++Y L+ LC G
Sbjct: 575 SDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 634
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKG 385
+A ++ M+ +G P+ LI G
Sbjct: 635 LAYRHFYEMLERGLVPNKYTYTLLIDG 661
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 119/243 (48%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ G + L +M G+MP V +Y ++ GL + Q+ A +M
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G +PD ++Y +LLN C+ +EA L ++ G P ++ YN ++ G+CR G
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 423
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A ++ E+M GCLP++ +Y L+ G + + +++ M+SKG P +
Sbjct: 424 EEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I +G + ++ + E ++ G + T+ +++ +C ++ E++ +++ +
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGL 543
Query: 443 KGD 445
+ D
Sbjct: 544 QPD 546
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 158/402 (39%), Gaps = 72/402 (17%)
Query: 75 PLLAKEIFDYASRQP-NFRHSNSTYLILILKLGRAKYFSLIDDI-----------LITLK 122
P LA ++F +A P F S S + +++ L RA + + + +
Sbjct: 79 PGLAHQLFRWAETTPCGFPRSASAFAAVLVPLARANHIRVAYPVSLRALHLGLLLPLVSL 138
Query: 123 SEHYPVTPS-----------LFTYLIKIYAESNLPDRA----LKTFRSMLEFNCKPLPKQ 167
P+ P+ Y + A PD L FR M P K
Sbjct: 139 LLSGPLAPAPLSLLNLLLSLSTKYSKECKARDATPDTCSTLCLSAFREMASHGVAPDVKD 198
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N++L +L R+ R +D + H G+ P+ +YN ++ +F G L
Sbjct: 199 CNKVLRVL---RDAAR--WDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDML 253
Query: 224 FNKMFERG--VMPDVESYRILMQGLCRKSQ------------------------------ 251
+M RG +P+ +Y +++ GL RK
Sbjct: 254 LKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLL 313
Query: 252 ----VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
V + DL +M N+G +P ++Y +++ L + ++ A M+ G PD++
Sbjct: 314 ARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVI 373
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN+++ G+C+ G +A + D+ G P +++Y L+ G C G + A++ + M
Sbjct: 374 TYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ +G P L+KG NV + +E+L G P
Sbjct: 434 VEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRP 475
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 177/352 (50%), Gaps = 5/352 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
+PN R++ ++ ++L+ K+G++ F + +L + S+ ++T LI + +
Sbjct: 325 KPN-RYTYNSIILLLCKIGKS--FE-AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A K F ML P +++ + P +LF G+ P+ +Y +
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ-NLFHEMISRGLKPDEVTYTTL 439
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ +C G++ A++L N+M + G+ P++ +Y L+ GLC+ +++ A +LL++M KG
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+ Y +++N +C+ + +A KL+ M+V G +PD + Y TV+ +CR G A K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L++M G P +V++ L+ G C GM + + + M+ KG P + L+K C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ + + + G AP +T+ +++ C +++ + E+++
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L+ A L G+ PN +YN ++ C G A + +M + ++PD
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ G + V A ++ML+K PD ++YTTL+ + K+ E L M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD V Y T++ +C+ G ++A + +M G PN+V+Y L+ GLC G
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A + + M KG + + ++++ G C G +++A +++E+ AG P T+ +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 418 VPQICAGEEMEKLGEVLNEIV 438
+ C +++K ++L E++
Sbjct: 545 IDAYCRLGDIDKAHKLLQEML 565
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 5/279 (1%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAY 221
P P + ++LV +L A L +G++ S N + N + I +A
Sbjct: 188 PNPIAFDIFFQVLV-EIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+F E G+ + SY I++ LCR +V A LL M + PD +SY+T+++
Sbjct: 247 KVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C +L++A KL+ M++KG P+ YN+++L C+ G++ +A KVL +M S +P+
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V Y TL+ G G A K+ M+SK SP + LI+GF GKV E + E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
++ G P E T+ ++ C EM + NE+V++
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 170/349 (48%), Gaps = 11/349 (3%)
Query: 94 SNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
N Y LI KLG + + D +++ K ++P TY LI+ + +
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK-----ISPDYITYTTLIQGFGQGGKVIE 416
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
F M+ KP ++++ + AF L + G+ PN +Y ++
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN-AFSLHNEMVQMGMTPNIVTYGALI 475
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G++ A L ++M ++G+ +V Y ++ G+C+ + +A+ L+++M G
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++YTT++++ CR + +A+KLL M +G P +V +N ++ GFC G D ++
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M G +P+ ++Y TL+ C + + K + M ++G +P + + LIKG C
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ EA + +E+++ G P ++ ++ + +++ + E+ E+
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 3/316 (0%)
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+++ P F ++ E A K +L + N L + + +
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +F ++G+ NT SYNI++ + C G + A+ L +M R PDV SY ++
Sbjct: 244 MAIKVFC---EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C ++ +A+ L++DM KG P+ +Y +++ LC+ K EA K+L M +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD V Y T++ GF + G A K ++M S P+ ++Y TL+ G G +
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
MIS+G P LI +C G++ A + E+++ G P+ T+ ++ +C
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 424 GEEMEKLGEVLNEIVK 439
E++ E+L+E+ K
Sbjct: 481 HGELDTANELLDEMRK 496
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + G+ P ++N++M FC G + L M E+G++PD +Y LM+
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C ++ +N + + M N+G PD+ +Y L+ C+ + L+EA+ L M KG P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+ YN ++ F ++ + ++A ++ E+M +G + + Y V ++G ++
Sbjct: 677 TVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEIT 732
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
RN + ++K GV P++ +YNI+++ C ++ A+ L+ +M E+G +P V S
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L++ +K ++ A +L E+M G V D Y ++ +C ++ E LC
Sbjct: 681 YNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD-MCYEEGDVEITLNLCDEA 739
Query: 299 VKGC 302
++ C
Sbjct: 740 IEKC 743
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 134/246 (54%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A D+ K + GV P+ +YNI + +C G+ A +LF++M E+ + P VE+Y
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ ++++++ A + + + +G +PD + + L++ C + A++LL M
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V +NT++ G+CRE + +A K+L++M G P+ +SY TL+ G +G A
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M+S GF P +ALI+G+ +G+ D A +L E+ G P + T++ ++ +
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Query: 422 CAGEEM 427
+++
Sbjct: 613 KTNDDL 618
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 135/267 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R A +FK+ + P+ +YN + C I A + K+ E G++P+ +
Sbjct: 265 RGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVT 324
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G C K +++A ++M+N+G V +Y L+++L +K++ EA ++ M+
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG PD+V YN + G+CR G A A + ++M P + +Y +L+ +
Sbjct: 385 EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMS 444
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ + I +G P + +ALI G C G +D A +L+E+ A P E T+ ++
Sbjct: 445 EAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLM 504
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGD 445
C ++E+ ++L+E+ + IK D
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPD 531
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 136/257 (52%), Gaps = 5/257 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI--YAESNLPDRALKTFR 154
TY +LI L K +D++ ++ + V P + TY I+I Y +AL F
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREK--GVEPDVVTYNIQINGYCRCGNAKKALSLFD 416
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+E N +P + ++++ RN + A + FK + K G+LP+ +N ++ C N
Sbjct: 417 EMVEKNIRPTVETYTSLIDVF-GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN 475
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G+I A+ L +M V+PD ++ LMQG CR+ +V A LL++M +G PD +SY
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISY 535
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TL++ ++ +++A ++ M G +P ++ YN ++ G+ + G A A ++L +M S
Sbjct: 536 NTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQS 595
Query: 335 NGCLPNLVSYRTLVGGL 351
G P+ +Y ++ +
Sbjct: 596 KGITPDDSTYLYVIEAM 612
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 195/443 (44%), Gaps = 43/443 (9%)
Query: 7 LRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQ 66
L +S + TT T A PP T + Y +SQ +P +P +
Sbjct: 19 LSNSSLYTTTTSAPPSPPITETKFLEYIQTSQ-----------WHFIKHLAPNLTPSLLS 67
Query: 67 KLIAS-QSDPLLAKEIFDYASRQPNFRHSNS--TYLILILKLGRAK-YFSLIDDILITLK 122
+ + +P+L + + + R P+ N+ L ++ +L K F ++ IL T
Sbjct: 68 STLPTLHQNPILVETLLSHLHRHPHCLDLNTRCITLCILYRLPSPKPSFHILQPILHT-- 125
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
TP++ I+ E +L L ++ L F+ LL + +
Sbjct: 126 -----TTPTV------IFNELSLARNRLNV-KTTLVFDL------------LLSAYCQFR 161
Query: 183 RP--AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+P A + ++ ++P T++ N ++ I +A+ ++ +M + + + ++
Sbjct: 162 KPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFN 221
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ LCR+ + +A D + M G P+ ++Y T++N C + K A K+ MK K
Sbjct: 222 IMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDK 281
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
PD YN+ + C+E R +A VL + +G +PN V+Y L+ G C++G D A
Sbjct: 282 NLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKA 341
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
Y M+++G + LI +++EA +++E+ + G P T+ + +
Sbjct: 342 FAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQING 401
Query: 421 ICAGEEMEKLGEVLNEIVKVEIK 443
C +K + +E+V+ I+
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNIR 424
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 140/296 (47%), Gaps = 3/296 (1%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P PK IL+ ++ H F+ A + T +++++ A+C A
Sbjct: 110 PSPKPSFHILQPIL-HTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALE 168
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
N M E ++P E+ L+ L + +++ A + E+M+ +++ ++N LC
Sbjct: 169 CLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILC 228
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
R+ K ++A + M+V G P++V YNTV+ G+C G+ A K+ + M P+
Sbjct: 229 REGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCY 288
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y + + LC + + A + ++ G P+ +ALI G CN G +D+A +E+
Sbjct: 289 TYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEM 348
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
+ G T+ +++ + + +E+ +++ E+ + ++ D +V I + Y
Sbjct: 349 MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD--VVTYNIQINGY 402
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 135/245 (55%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K V P+ +YN +M + ++ A +FN M GV PDV +Y IL+ G C+ V+
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++L ++M K VPDT++Y++L++ LC+ ++ + L+ M+ +G D++ YN+++
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C+ G A + M G PN ++ L+ GLC G A++ Q +++KG+
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ + +I G C G ++EA +L ++ + G P+ T+ +I+ + +E +K ++
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKL 784
Query: 434 LNEIV 438
L +++
Sbjct: 785 LRQMI 789
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 151/312 (48%), Gaps = 4/312 (1%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP + +Y I I + + D+AL F+ M+ P+ Q N+IL+ ++Y A
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPII-QFNKILDSFAKMKHY-STA 326
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G+ P+ + NI++ FC G I+ +++ K+ +RG P + L++G
Sbjct: 327 VSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKG 386
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC K QV +A+ + +L +GF + +SY TL+N +C+ R A KLL ++ + P+
Sbjct: 387 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 446
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y+T++ C+ +A + +M G ++V+Y TL+ G C G A +
Sbjct: 447 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN 506
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ K +P L+ GKV EA VL +LKA P T+ ++
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVY 566
Query: 426 EMEKLGEVLNEI 437
E++K V N +
Sbjct: 567 EVKKAQHVFNAM 578
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 146/279 (52%), Gaps = 7/279 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDIL-ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
TY IL+ LG+ +L + LK+ V P +FTY L+ Y +A F
Sbjct: 519 TYTILVDALGKEGKVKEAKSVLAVMLKA---CVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+M P ++ + + A +LFK H+ ++P+T +Y+ ++ C
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSK-MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+G IS + L ++M +RG DV +Y L+ GLC+ +++A+ L M ++G P+T +
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
+T LL+ LC+ +L++A ++ + KG + D+ YN ++ G C++G +A +L M
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
NGC+PN V++ ++ L + D A+K ++ MI++G
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R + KP + + I++ L ++ + A+ LF G+ + +Y+ ++
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQ-LVSEAYGLFSEMTVKGISADVVTYSTLI 489
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A L N+M + + PDV +Y IL+ L ++ +V A +L ML
Sbjct: 490 YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVK 549
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +Y TL+N ++++A + M + G PD+ Y ++ GFC+ +A +
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNL 609
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
++M +P+ V+Y +LV GLC G + M +G ++LI G C
Sbjct: 610 FKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCK 669
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G +D+A + ++ G P+ T+ +++ +C G ++ EV +++
Sbjct: 670 NGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 719
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + PN + Y+ ++ A C +S AY LF++M +G+ DV +Y L
Sbjct: 429 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 488
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++ A+ LL +M+ K PD +YT L+++L ++ K++EA +L M +K C
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM-LKAC 547
Query: 303 -NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ YNT++ G+ A V M G P++ +Y L+ G C M D A
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M K P +L+ G C G++ +++E+ G+ T+ ++ +
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C ++K + N++ I+ +T
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNT 692
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 2/234 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A L + P+ ++Y I++ A G + A ++ M + V PDV +Y
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G +V +A + M G PD +YT L+N C+ K + EA L M K
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y+++V G C+ GR ++++M G ++++Y +L+ GLC G D A
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI 677
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
M +G P+ L+ G C G++ +A V ++LL G H D ++
Sbjct: 678 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY--HLDVYI 729
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 5/276 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLRPAFDLFK 190
+T L+ + A ML+ KP N ++ LLV ++ A +F
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYE---VKKAQHVFN 576
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ GV P+ +Y I++ FC + + A LF +M ++ ++PD +Y L+ GLC+
Sbjct: 577 AMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSG 636
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ DL+++M ++G D ++Y +L++ LC+ L +A L +MK +G P+ +
Sbjct: 637 RISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT 696
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G C+ GR DA +V +D+ + G ++ Y ++ G C QG+ + A + M
Sbjct: 697 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEEN 756
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G P+ +I + D+A +L +++ G
Sbjct: 757 GCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
N D +++ ++ K+ +RG PD + L++GLC K QV A+ + +L +GF + +S
Sbjct: 41 NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVS 100
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y TL+N +CR R A K L ++ + P++ YNT++ C+ +A + +M
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G N+V+Y TL+ G C G A + +M+ K +P+ + L+ C GKV
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
EA VL +LKA + T+ ++ E++K V N +
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G P+T + N +++ C G + A +K+ +G + SY L+ G+CR
Sbjct: 56 KRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTR 115
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ L + + P+ Y T++++LC+ + + EAY L M VKG + ++V Y+T++
Sbjct: 116 AAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLI 175
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC G+ +A +L M PN+ +Y LV LC +G AK + +M+
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ L+ G+ V +V +A V + G P ++ +++ C + ++K +
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295
Query: 434 LNEIV 438
E++
Sbjct: 296 FKEMI 300
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 132/281 (46%), Gaps = 2/281 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R + KP + N I++ L ++ + A+ LF G+ N +Y+ ++
Sbjct: 117 AIKFLRKIDGRLAKPNVEMYNTIIDALCKYQ-LVSEAYGLFSEMTVKGISANVVTYSTLI 175
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A L N M + + P+V +Y IL+ LC++ +V A +L ML
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
+ ++Y+TL++ ++++A + M + G PD+ YN ++ GFC+ R A +
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
++M + P ++ + ++ + A + KG P + LI FC+
Sbjct: 296 FKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCH 354
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+G++ VL ++LK G P T ++ +C +++K
Sbjct: 355 MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 128 VTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP + TY I I + +S + D AL F+ M + N P + +++ L +
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGL-CKSGRISYV 641
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+DL G + +YN ++ C NG + A LFNKM ++G+ P+ ++ IL+ G
Sbjct: 642 WDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDG 701
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A ++ +D+L KG+ D Y ++ C++ L EA +L +M+ GC P+
Sbjct: 702 LCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPN 761
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
V ++ ++ ++ A K+L M + G L
Sbjct: 762 AVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 34/288 (11%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K V N +Y+ +M + ++ A +FN M GV PDV SY I++ G C+ +V+
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290
Query: 254 RAVDLLEDMLN----------------------------------KGFVPDTLSYTTLLN 279
+A++L ++M+ KG PD + L+N
Sbjct: 291 KALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILIN 350
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ + +L ++ +G P V NT++ G C +G+ A + + + G
Sbjct: 351 CFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 410
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N VSY TL+ G+C G A K ++ + + P+ + +I C V EA G+
Sbjct: 411 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 470
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
E+ G + T+ ++ C ++++ +LNE+V I D R
Sbjct: 471 SEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVR 518
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 184/391 (47%), Gaps = 23/391 (5%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF--------SLIDDILI 119
L+ +Q D +L+ E F++ + Q H+ T+ I++ L + + F S+I+ I
Sbjct: 88 LLKTQKDYVLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSI 147
Query: 120 TLKSEHYPV----------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
S+ + +P +F L K +A A TF M ++ P + N
Sbjct: 148 DFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCN 207
Query: 170 RILELLVTHRNYLRP--AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
L L+ N+ R A ++ + + PN+ + N+++ A C G + A +F +M
Sbjct: 208 AYLSSLL---NFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEM 264
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
G P+V SY L+ G C K ++ A+ L M G PD +++ TL+N C+ KL
Sbjct: 265 GTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKL 324
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+EA KL MK +P V YN ++ G+ + G ++ E+M ++++Y L
Sbjct: 325 QEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNAL 384
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ GLC +G A ++ + KG P+ S ALI G C + + A + + ++K+
Sbjct: 385 ILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSF 444
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P + T+ M++ C E+ + ++L E++
Sbjct: 445 TPCDQTFRMLLSTFCENEDYDGAVQLLEEML 475
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ +L + + A D M + GF+P S L+SL + A M+
Sbjct: 171 FDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMR 230
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
P+ N V+ C+ GR A V E+M + G PN+ SY TL+ G C++G+
Sbjct: 231 RSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLS 290
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K +M G P + L+ GFC VGK+ EA + E+ +P T+ +++
Sbjct: 291 SAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILI 350
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
E + E+ + ++K D A I
Sbjct: 351 NGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALI 385
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+ + V + +YN ++ C G A L ++ E+G++P+ ++ L+ G C
Sbjct: 365 LFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQC 424
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ Q RA + + M+ F P ++ LL++ C + A +LL M + PD+
Sbjct: 425 VQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVN 484
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+ + G + G+ A + ++ + LP
Sbjct: 485 NLYELCAGLGQCGKVKTAMMLCSELEAQRLLP 516
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+ TY LI Y+++ + + F M F K N ++ L + A
Sbjct: 339 LSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAA 398
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ L + + G++PN +++ ++ C A+ ++ M + P +++R+L+
Sbjct: 399 Y-LVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLST 457
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C + AV LLE+MLN+ PD + L L + K++ A L ++ + P+
Sbjct: 458 FCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPE 517
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 183/412 (44%), Gaps = 43/412 (10%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHY 126
+LI Q A + F +AS F HS STY LI KL + F + +L + +
Sbjct: 43 QLILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTS-I 101
Query: 127 PVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH------ 178
P +F +++ + + + R + +F+ P K N IL++LV
Sbjct: 102 GANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVKEDIDMAR 161
Query: 179 ----------------------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
N + F L + +GV PNT YN ++ A
Sbjct: 162 EFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHA 221
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C NG + A +L N+M V P+ ++ IL+ ++ + +A+ LLE VPD
Sbjct: 222 LCRNGKVGRARSLMNEM----VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPD 277
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++ T ++ LC ++ EA ++L R++ G + D V YNT++ GFC G+ L+
Sbjct: 278 VVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLK 337
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M + G LPN+ +Y L+ G C+ M D+A M + G + +F +I+G C+ G
Sbjct: 338 QMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEG 397
Query: 391 KVDEACGVLE--ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
++++ +LE E K G H + I+ + ++ E L ++ K+
Sbjct: 398 RIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKL 449
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 172/380 (45%), Gaps = 52/380 (13%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI---YAESNLPDRALKTFRSMLEFN 160
K+GRA+ SL++++ V P+ T+ I I Y E NL +AL +
Sbjct: 227 KVGRAR--SLMNEM----------VDPNEVTFNILISSYYKEENLV-QALVLLEKCFALS 273
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P + +++E+L + + A ++ + G + +YN +++ FC G + +
Sbjct: 274 LVPDVVTVTKVVEILC-NAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVG 332
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+M +G +P+V++Y IL+ G C ++ A+DL DM G + +++ T++
Sbjct: 333 LHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRG 392
Query: 281 LCRKKKLREAYKLLCRMKV--KGCNPDIVHYNTVVLGF---------------------- 316
LC + ++ + + +L M+ +G I YN+++ G
Sbjct: 393 LCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPR 452
Query: 317 -----------CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
C+EG DA + + M G +P+++ Y +LV G G A + +
Sbjct: 453 AVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELIN 512
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MIS P S +A+I FC GK++ A +E++ G P+ +T+ ++ +C
Sbjct: 513 EMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKG 572
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+++K +V E+V+ I D
Sbjct: 573 DIQKALQVFLEMVEKGILPD 592
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ K G LPN +YNI++ FC + + +A LFN M G+ + ++
Sbjct: 329 VKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDT 388
Query: 242 LMQGLCRKSQVNRAVDLLEDM--LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK- 298
+++GLC + ++ +LE M +G Y +++ L ++ + EA + L +M
Sbjct: 389 MIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGK 448
Query: 299 ------------VKGCN--------------------PDIVHYNTVVLGFCREGRAIDAC 326
++ C P I+ YN++V GF + G +A
Sbjct: 449 LFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAV 508
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++ +M SN C P ++ ++ C+QG + A K+M+ + ++G P+ LI
Sbjct: 509 ELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVL 568
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C G + +A V E+++ G P + W
Sbjct: 569 CRKGDIQKALQVFLEMVEKGILPDQCIW 596
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%)
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G I A +++KM + G +P + Y L+ G + + AV+L+ +M++ P
Sbjct: 464 CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA 523
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ ++ C + K+ A K + + +GC P+ Y+ ++ CR+G A +V +
Sbjct: 524 STFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLE 583
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFD 358
M G LP+ +++L+ L Q F+
Sbjct: 584 MVEKGILPDQCIWKSLLLSLSLQNNFN 610
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PS+ Y L+ +++ A++ M+ NC P+ N I+ + + A
Sbjct: 486 PSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFC-EQGKIESALK 544
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G +PNT++Y+ ++ C GDI A +F +M E+G++PD ++ L+ L
Sbjct: 545 FMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIWKSLLLSLS 604
Query: 248 RKSQVNRAVDLLEDML 263
++ N+ V ++ +L
Sbjct: 605 LQNNFNKNVSNIDYLL 620
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 179/404 (44%), Gaps = 37/404 (9%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P +V ++ Q+D +A F +A RQ +RH Y ++ L + K +L +
Sbjct: 101 PRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLM 160
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
P F Y++ Y+ + A++ M + +P N + +LV N
Sbjct: 161 AKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMG-NR 219
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + + PN +YN +++ +C + A L +M +G PD SY
Sbjct: 220 LDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYT 279
Query: 242 LMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTT------------------------ 276
+M LC++ ++ L+E ML + +PD ++Y T
Sbjct: 280 VMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 339
Query: 277 -----------LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+++S CR+ ++ +A +++ M KGC PD+V Y +V+ G C+E + A
Sbjct: 340 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 399
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
K+L M +GC PN VSY L+ GLC G A++ M + + P+ L+ G
Sbjct: 400 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHG 459
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
F GK EAC ++ E++K G P +++ +C E++++
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 170/360 (47%), Gaps = 3/360 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ N TY + L + + + L + + V ++ ++ +
Sbjct: 302 KDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRM 361
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+A + M C P ++ L R + A + + +KHG PNT SY
Sbjct: 362 DKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK-VDQAKKMLRQMYKHGCKPNTVSYTA 420
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C NG+ A + N E +P+ +Y +LM G R+ + + A DL+ +M+ KG
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F P + L+ SLC+++K+ EA + + + GC ++V++ TV+ GFC++ A
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+L+DM + P++V+Y T++ L +G + A K M+ G+ P +I +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQY 600
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C +G+V++ +LE++L E + ++ ++C+ +E+ ++L ++++ K D
Sbjct: 601 CRMGRVEDLLKLLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDA 658
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 155/299 (51%), Gaps = 6/299 (2%)
Query: 147 DRALKTFRSMLEFNCKP---LPKQL--NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
++ +K R ++E K LP Q+ N + +L H + A + + A + +
Sbjct: 287 EKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKH-GHGDEALEFLREAEERRFRVDK 345
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
Y+ ++ +FC G + A + N+MF +G +PDV +Y ++ GLC++ +V++A +L
Sbjct: 346 VGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQ 405
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G P+T+SYT LLN LC+ EA +++ + P+ + Y+ ++ GF REG+
Sbjct: 406 MYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGK 465
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ +AC ++ +M G P V L+ LC + D AK++M+ ++ G + +
Sbjct: 466 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTT 525
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+I GFC ++ A +L+++ + + P T+ I+ + +E+ ++ ++++V
Sbjct: 526 VIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 41/319 (12%)
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
P+Q+ +L+L R LR + + ++H + I+ + G A +
Sbjct: 101 PRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQG----AKRV 156
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M +R + E++ +M R ++ A+ L M G PD T ++ L
Sbjct: 157 LRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVM 216
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+L +A + L RM++ P+++ YN ++ G+C R DA +++ +MP GC P+ +S
Sbjct: 217 GNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKIS 276
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKG---------------FSPH------------- 375
Y T++G LC + + M+ M+ S H
Sbjct: 277 YYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 336
Query: 376 ----FSVSH----ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
F V A++ FC G++D+A ++ E+ G P T+ ++ +C ++
Sbjct: 337 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKV 396
Query: 428 EKLGEVLNEIVKVEIKGDT 446
++ ++L ++ K K +T
Sbjct: 397 DQAKKMLRQMYKHGCKPNT 415
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 111/289 (38%), Gaps = 37/289 (12%)
Query: 123 SEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
SE P+ TY L+ + A R M++ P P ++N +++ L
Sbjct: 441 SEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEK 500
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A + +G N ++ ++ FC D+ A +L + M+ PDV +Y
Sbjct: 501 -VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK-------------- 286
++ L +K ++ A L ML G++P ++Y T+++ CR +
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
Query: 287 -------------------LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
L +AYKLL ++ D + ++ + +G + +
Sbjct: 620 QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYN 679
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPH 375
V M + +P+L + L +G + A K + + +G SP
Sbjct: 680 VACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 728
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 1/283 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A F + C+P ++E L H + A+ L++ +PN Y
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH-GRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R F G + ++N+M G PD+ M + + ++ + L +++ N G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F+PD SYT L++ L + EAY+L MK +GC D YNTV+ GFC+ G+ A
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++LE+M + G P +V+Y +++ GL D A + SKG + + +LI GF
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
VG++DEA ++EEL++ G P+ TW ++ + EE+ +
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 17/363 (4%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRA----KYFSLIDDIL 118
C+ Q+L D E D+ + +P+ TY LI LGR + + L + +L
Sbjct: 455 CKAQRL----DDACSIFEGLDHKTCRPD----AVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ P ++T LI+ + + + K + ML C P LN ++ V
Sbjct: 507 ---DANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC-VFK 561
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ LF+ G +P+ +SY I++ G AY LF M E+G + D +
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G C+ +VN+A LLE+M KG P ++Y ++++ L + +L EAY L K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG ++V Y++++ GF + GR +A ++E++ G PN+ ++ L+ L
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A Q M +P++ LI G C + K ++A +E+ K G P+ T+ ++
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 419 PQI 421
+
Sbjct: 802 SGL 804
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 159/347 (45%), Gaps = 2/347 (0%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F +A R + H Y L++ + R + F+ ++ IL + + + + ++ +
Sbjct: 117 FRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI 176
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
+S A ++M + +P ++ L T R+ LF+ + G N
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDS-DCMLTLFQQMQELGYAVNV 235
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ ++R F G + A +L ++M + PDV Y + + + +V+ A +
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHE 295
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G V D ++YT+++ LC+ +L EA +L M P YNT+++G+ G+
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA +LE GC+P++VSY ++ L +G D A K + M K P+ S +
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNI 414
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+I C GK++ A V + + AG P+ T ++V ++C + ++
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 169/394 (42%), Gaps = 26/394 (6%)
Query: 39 ESPSSPEQQQESSISNSKS---PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSN 95
E+ E+ ++ +I N + I C+ KL L+ ++ A PN N
Sbjct: 393 EALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL----ETALVVRDAMKDAGLFPNVITVN 448
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
I++ +L +A+ L D I +H P TY LI+ D A K +
Sbjct: 449 ----IMVDRLCKAQ--RLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLR-----PAFDLFKSAHKHGVLPNTKSYNIMM 208
ML+ N P ++ RN+ + ++ + G P+ N M
Sbjct: 503 EQMLDANQIPNAVVYTSLI------RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYM 556
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
G+I LF ++ G +PD SY IL+ GL + + A +L M +G V
Sbjct: 557 DCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
DT +Y T+++ C+ K+ +AY+LL MK KG P +V Y +V+ G + R +A +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
E+ S G N+V Y +L+ G G D A M+ ++ KG +P+ + L+
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ EA + + P+ T+ +++ +C
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 162/387 (41%), Gaps = 37/387 (9%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
F SN+T + ++L +++ + T++ + S +T LI + S D
Sbjct: 159 AGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDC 218
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L F+ M E + L L + + A L + + P+ YN+ +
Sbjct: 219 MLTLFQQMQELG-YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCI 277
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
F G + +A+ F++M G++ D +Y ++ LC+ ++N AV+L E M V
Sbjct: 278 DCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P +Y T++ K +AY LL R + KGC P +V YN ++ R+G+ +A K
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF------------ 376
E+M + +PNL +Y ++ LC G + A M G P+
Sbjct: 398 FEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCK 456
Query: 377 ------------SVSH-----------ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ H +LI+G G+VDEA + E++L A + P+
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKV 440
+ ++ E ++ NE++++
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRL 543
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A++LF + + G + +T++YN ++ FC +G ++ AY L +M +G P V +Y
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 241 ILMQGLCRKSQVNRA-------------------------------VD----LLEDMLNK 265
++ GL + +++ A +D ++E+++ K
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ ++ LL++L + +++ EA MK C P+ + Y+ ++ G C+ + A
Sbjct: 719 GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA 778
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++M G PN+ +Y T++ GL G A + KG ++ +A+I+G
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK---LGEVLNEIVKVE 441
N + +A + EE G + + T V+++ + E +E+ +G VL E K +
Sbjct: 839 LSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQ 897
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 37/293 (12%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C P N IL L + + A F+ K + PN +YNIM+ C G + A
Sbjct: 371 CIPSVVSYNCILSCL-GRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + M + G+ P+V + I++ LC+ +++ A + E + +K PD ++Y +L+
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L R ++ EAYKL +M P+ V Y +++ F + GR D K+ +M GC P+
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548
Query: 341 LV-----------------------------------SYRTLVGGLCDQGMFDVAKKYMQ 365
L+ SY L+ GL G A +
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M +G + +I GFC GKV++A +LEE+ G P T+ ++
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 142/320 (44%), Gaps = 4/320 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ILI L +A + ++ T+K + + + +I + +S ++A + M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+P +++ L + L A+ LF+ A G+ N Y+ ++ F G
Sbjct: 646 KTKGHEPTVVTYGSVIDGL-AKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I AY + ++ ++G+ P+V ++ L+ L + +++ A+ + M + P+ ++Y+
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ LC+ +K +A+ M+ +G P++ Y T++ G + G ++A + E G
Sbjct: 765 LIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+ + Y ++ GL + A + + KG S + L+ +++A
Sbjct: 825 GVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAA 884
Query: 397 ---GVLEELLKAGEAPHEDT 413
VL E KA A T
Sbjct: 885 IVGAVLRETAKAQHAARSWT 904
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 179/404 (44%), Gaps = 37/404 (9%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P +V ++ Q+D +A F +A RQ +RH Y ++ L + K +L +
Sbjct: 101 PRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLM 160
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
P F Y++ Y+ + A++ M + +P N + +LV N
Sbjct: 161 AKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMG-NR 219
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + + PN +YN +++ +C + A L +M +G PD SY
Sbjct: 220 LDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYT 279
Query: 242 LMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTT------------------------ 276
+M LC++ ++ L+E ML + +PD ++Y T
Sbjct: 280 VMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 339
Query: 277 -----------LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
+++S CR+ ++ +A +++ M KGC PD+V Y +V+ G C+E + A
Sbjct: 340 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 399
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
K+L M +GC PN VSY L+ GLC G A++ M + + P+ L+ G
Sbjct: 400 KKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHG 459
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
F GK EAC ++ E++K G P +++ +C E++++
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 169/360 (46%), Gaps = 3/360 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ N TY + L + + + L + + V ++ ++ +
Sbjct: 302 KDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRM 361
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+A + M C P ++ L R + A + + +KHG PNT SY
Sbjct: 362 DKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK-VDQAKKMLRQMYKHGCKPNTVSYTA 420
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C NG+ A + N E +P+ +Y +LM G R+ + + A DL+ +M+ KG
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F P + L+ SLC+++K+ EA + + + GC ++V++ TV+ GFC++ A
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+L+DM + P++V+Y T++ L +G + A K M+ G P +I +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 600
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C +G+V++ +LE++L E + ++ ++C+ +E+ ++L ++++ K D
Sbjct: 601 CRMGRVEDLLKLLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDA 658
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 155/299 (51%), Gaps = 6/299 (2%)
Query: 147 DRALKTFRSMLEFNCKP---LPKQL--NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
++ +K R ++E K LP Q+ N + +L H + A + + A + +
Sbjct: 287 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKH-GHGDEALEFLREAEERRFRVDK 345
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
Y+ ++ +FC G + A + N+MF +G +PDV +Y ++ GLC++ +V++A +L
Sbjct: 346 VGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQ 405
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G P+T+SYT LLN LC+ EA +++ + P+ + Y+ ++ GF REG+
Sbjct: 406 MYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGK 465
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+ +AC ++ +M G P V L+ LC + D AK++M+ ++ G + +
Sbjct: 466 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTT 525
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+I GFC ++ A +L+++ + + P T+ I+ + +E+ ++ ++++V
Sbjct: 526 VIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 136/319 (42%), Gaps = 41/319 (12%)
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
P+Q+ +L+L R LR + + ++H + I+ + G A +
Sbjct: 101 PRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQG----AKRV 156
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M +R + E++ +M R ++ A+ +L M G PD T ++ L
Sbjct: 157 LRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVM 216
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+L +A + L RM++ P+++ YN ++ G+C R DA +++ +MP GC P+ +S
Sbjct: 217 GNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKIS 276
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKG---------------FSPH------------- 375
Y T++G LC + + M+ M+ S H
Sbjct: 277 YYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 336
Query: 376 ----FSVSH----ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
F V A++ FC G++D+A ++ E+ G P T+ ++ +C ++
Sbjct: 337 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKV 396
Query: 428 EKLGEVLNEIVKVEIKGDT 446
++ ++L ++ K K +T
Sbjct: 397 DQAKKMLRQMYKHGCKPNT 415
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 110/289 (38%), Gaps = 37/289 (12%)
Query: 123 SEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
SE P+ TY L+ + A R M++ P P ++N +++ L
Sbjct: 441 SEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEK 500
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A + +G N ++ ++ FC D+ A +L + M+ PDV +Y
Sbjct: 501 -VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK-------------- 286
++ L +K ++ A L ML G +P ++Y T+++ CR +
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
Query: 287 -------------------LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
L +AYKLL ++ D + ++ + +G + +
Sbjct: 620 QECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYN 679
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG-FSPH 375
V M + +P+L + L +G + A K + + +G SP
Sbjct: 680 VACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQ 728
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 177/352 (50%), Gaps = 5/352 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
+PN R++ ++ ++L+ K+G++ F + +L + S+ ++T LI + +
Sbjct: 325 KPN-RYTYNSIILLLCKIGKS--FE-AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A K F ML P +++ + P +LF G+ P+ +Y +
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ-NLFHEMISRGLKPDEVTYTTL 439
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ +C G++ A++L N+M + G+ P++ +Y L+ GLC+ +++ A +LL++M KG
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+ Y +++N +C+ + +A KL+ M+V G +PD + Y TV+ +CR G A K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L++M G P +V++ L+ G C GM + + + M+ KG P + L+K C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ + + + G AP +T+ +++ C +++ + E+++
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L+ A L G+ PN +YN ++ C G A + +M + ++PD
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ G + V A ++ML+K PD ++YTTL+ + K+ E L M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD V Y T++ +C+ G ++A + +M G PN+V+Y L+ GLC G
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A + + M KG + + ++++ G C G +++A +++E+ AG P T+ +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 418 VPQICAGEEMEKLGEVLNEIV 438
+ C +++K ++L E++
Sbjct: 545 IDAYCRLGDIDKAHKLLQEML 565
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 5/279 (1%)
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD-ISIAY 221
P P + ++LV +L A L +G++ S N + N + I +A
Sbjct: 188 PNPIAFDIFFQVLV-EIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+F E G+ + SY I++ LCR +V A LL M + PD +SY+T+++
Sbjct: 247 KVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C +L++A KL+ M++KG P+ YN+++L C+ G++ +A KVL +M S +P+
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V Y TL+ G G A K+ M+SK SP + LI+GF GKV E + E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
++ G P E T+ ++ C EM + NE+V++
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 168/349 (48%), Gaps = 11/349 (3%)
Query: 94 SNSTYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
N Y LI KLG + + D +++ K ++P TY LI+ + +
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK-----ISPDYITYTTLIQGFGQGGKVIE 416
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
F M+ KP ++++ + AF L + G+ PN +Y ++
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN-AFSLHNEMVQMGMTPNIVTYGALI 475
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G++ A L ++M ++G+ +V Y ++ G+C+ + +A+ L+++M G
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++YTT++++ CR + +A+KLL M +G P +V +N ++ GFC G D ++
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M G +P+ ++Y TL+ C + + K + M ++G +P + + LIKG C
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ EA + +E+++ G P ++ ++ + + + E+ E+
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 3/316 (0%)
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+++ P F ++ E A K +L + N L + + +
Sbjct: 184 KYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +F ++G+ NT SYNI++ + C G + A+ L +M R PDV SY ++
Sbjct: 244 MAIKVFC---EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C ++ +A+ L++DM KG P+ +Y +++ LC+ K EA K+L M +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD V Y T++ GF + G A K ++M S P+ ++Y TL+ G G +
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
MIS+G P LI +C G++ A + E+++ G P+ T+ ++ +C
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 424 GEEMEKLGEVLNEIVK 439
E++ E+L+E+ K
Sbjct: 481 HGELDTANELLDEMRK 496
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A L K G+ P+ +Y ++ A+C GDI A+ L +M +RG+ P V ++ +
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C + LL ML KG VPD ++Y TL+ C + + K+ RM+ +G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD YN ++ G C+ +A + ++M G +P + SY L+ + F A+
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698
Query: 362 KYMQLMISKGF 372
+ + M G
Sbjct: 699 ELFEEMRGHGL 709
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + G+ P ++N++M FC G + L M E+G++PD +Y LM+
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C ++ +N + + M N+G PD+ +Y L+ C+ + L+EA+ L M KG P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+ YN ++ F ++ + +A ++ E+M +G + + Y V ++G ++
Sbjct: 677 TVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEIT 732
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
RN + ++K GV P++ +YNI+++ C ++ A+ L+ +M E+G +P V S
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L++ +K + A +L E+M G V D Y ++ +C ++ E LC
Sbjct: 681 YNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD-MCYEEGDVEITLNLCDEA 739
Query: 299 VKGC 302
++ C
Sbjct: 740 IEKC 743
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 160/323 (49%), Gaps = 4/323 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ V P+++TY L++ + A+ M C P N ++ L
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF-CRAGELD 62
Query: 184 PAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A + + G PN ++N M+ C G + A +F++M G+ PDV SY L
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++ ++ + +M +G VPD +++T+L+++ C+ L +A L+ +M+ +G
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ V + ++ GFC++G DA +E+M G P++V Y L+ G C G D+A++
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M +K P +I G+C VG +D A + +++LK G P T+ ++ +C
Sbjct: 243 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 302
Query: 423 AGEEMEKLGEVLNEIVKVEIKGD 445
+ + E+ ++++ ++ D
Sbjct: 303 EEKRLNDACELFENMLQLGVQPD 325
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 160/314 (50%), Gaps = 4/314 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPA 185
P+ TY L+ + + D A + M E N KP N ++ L + A
Sbjct: 42 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL-CKAGRMEGA 100
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G+ P+ SYN ++ +C G + + +F++M +RG++PDV ++ L+
Sbjct: 101 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 160
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + +AV L+ M +G + +++T L++ C+K L +A + M+ G P
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+C+ GR A +++ +M + P++V+Y T++ G C G D A + Q
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 280
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ KG P +LI+G C ++++AC + E +L+ G P E T+ ++ C
Sbjct: 281 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Query: 426 EMEKLGEVLNEIVK 439
+EK + +E+++
Sbjct: 341 NVEKALSLHDEMIR 354
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 1/254 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+HGV PN +YNI++RA C G + A + M G P+ +Y L+ CR +++
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62
Query: 254 RAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A ++ M +G P+ +++ +++N LC+ ++ A K+ M +G PD+V YNT+
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C+ G ++ V +M G +P++V++ +L+ C G + A + M +G
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ ALI GFC G +D+A +EE+ K G P + ++ C M+ E
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242
Query: 433 VLNEIVKVEIKGDT 446
++ E+ +K D
Sbjct: 243 LIREMEAKRVKPDV 256
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 157/324 (48%), Gaps = 4/324 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ RA + + ++L E P+L T+ ++ ++ + A K F
Sbjct: 47 TYNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 105
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P N +L L + +F + G++P+ ++ ++ A C
Sbjct: 106 EMVREGLAPDVVSYNTLLSGY-CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 164
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A L +M ERG+ + ++ L+ G C+K ++ A+ +E+M G P + Y
Sbjct: 165 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 224
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+N C+ ++ A +L+ M+ K PD+V Y+T++ G+C+ G A ++ + M
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 284
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G LP+ ++Y +L+ GLC++ + A + + M+ G P LI G C G V++
Sbjct: 285 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 344
Query: 395 ACGVLEELLKAGEAPHEDTWVMIV 418
A + +E+++ G P T+ +++
Sbjct: 345 ALSLHDEMIRKGVLPDVVTYSVLI 368
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 16/301 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + D AL M + +P N ++ + A +L +
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY-CKLGRMDLARELIREM 247
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
V P+ +Y+ ++ +C G++ A+ L KM ++GV+PD +Y L++GLC + ++
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A +L E+ML G PD +YTTL++ C++ + +A L M KG PD+V Y+ +
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR---------------TLVGGLCDQGMF 357
+ G + R +A ++L + +P+ + Y L+ G C +G+
Sbjct: 368 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 427
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A K Q M+ + + SV LI G C G V +A +++L++G +P+ + + +
Sbjct: 428 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 487
Query: 418 V 418
V
Sbjct: 488 V 488
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ +L A + K G+ P+ YN ++ +C G + +A L +M + V PDV +
Sbjct: 199 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 258
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G C+ ++ A L + ML KG +PD ++Y++L+ LC +K+L +A +L M
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G PD Y T++ G C+EG A + ++M G LP++V+Y L+ GL
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378
Query: 359 VAK----------------KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
A KY LM+ + SV AL+KGFC G + EA V + +
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVV-ALLKGFCMKGLMKEADKVYQSM 437
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEK 429
L + +++ C G + K
Sbjct: 438 LDRNWKLDGSVYSILIHGHCRGGNVRK 464
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M GV P+V +Y IL++ LC + ++ AV ++ DM G P+ ++Y TL+ + CR +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 287 LREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
L A +++ M+ +G P++V +N++V G C+ GR A KV ++M G P++VSY
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
TL+ G C G + M +G P +LI C G +++A ++ ++ +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 406 GEAPHEDTWVMIVPQIC----------AGEEMEKLG 431
G +E T+ ++ C A EEM K G
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 216
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 149/339 (43%), Gaps = 12/339 (3%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ + CR +L ++ L +E + +PN NS L K GR + + D +
Sbjct: 52 VAAFCRAGELDGAERVVSLMRE---EGNAKPNLVTFNSMVNGLC-KAGRMEGARKVFDEM 107
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + P + +Y L+ Y + +L F M + P ++
Sbjct: 108 V-----REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 162
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
N L A L + G+ N ++ ++ FC G + A +M + G+ P V
Sbjct: 163 KAGN-LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y L+ G C+ +++ A +L+ +M K PD ++Y+T+++ C+ L A++L +
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 281
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M KG PD + Y++++ G C E R DAC++ E+M G P+ +Y TL+ G C +G
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ A MI KG P LI G + EA
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 380
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 172/406 (42%), Gaps = 65/406 (16%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
S I + C+ L Q+ L+A+ R+ R + T+ LI + + +DD
Sbjct: 156 SLIHATCKAGNL--EQAVALVAQ------MRERGLRMNEVTFTALIDGFCKKGF---LDD 204
Query: 117 ILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
L+ ++ + PS+ Y LI Y + D A + R M KP + I+
Sbjct: 205 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 264
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
N L AF L + K GVLP+ +Y+ ++R C ++ A LF M + GV
Sbjct: 265 GYCKVGN-LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 323
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PD +Y L+ G C++ V +A+ L ++M+ KG +PD ++Y+ L+N L + + +EA++L
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Query: 294 LCRMKVKGCNPDIVHYNTVVL---------------GFCREGRAIDACKVLEDMPS---- 334
L ++ + PD + Y+ ++L GFC +G +A KV + M
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443
Query: 335 -------------------------------NGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+G PN S +LV GL ++GM A
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 503
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+Q +++ S ALI G VD VL + + G P
Sbjct: 504 IQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 1/283 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A F + C+P ++E L H + A+ L++ +PN Y
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH-GRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R F G + ++N+M G PD+ M + + ++ + L +++ N G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F+PD SYT L++ L + EAY+L MK +GC D YNTV+ GFC+ G+ A
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++LE+M + G P +V+Y +++ GL D A + SKG + + +LI GF
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
VG++DEA ++EEL++ G P+ TW ++ + EE+ +
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 17/363 (4%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRA----KYFSLIDDIL 118
C+ Q+L D E D+ + +P+ TY LI LGR + + L + +L
Sbjct: 455 CKAQRL----DDACSIFEGLDHKTCRPD----AVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ P ++T LI+ + + + K + ML C P LN ++ V
Sbjct: 507 ---DANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC-VFK 561
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ LF+ G +P+ +SY I++ G AY LF M E+G + D +
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y ++ G C+ +VN+A LLE+M KG P ++Y ++++ L + +L EAY L K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG ++V Y++++ GF + GR +A ++E++ G PN+ ++ L+ L
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A Q M +P++ LI G C + K ++A +E+ K G P+ T+ ++
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 419 PQI 421
+
Sbjct: 802 SGL 804
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 159/347 (45%), Gaps = 2/347 (0%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F +A R + H Y L++ + R + F+ ++ IL + + + + ++ +
Sbjct: 117 FRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFI 176
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
+S A ++M + +P ++ L T R+ LF+ + G N
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDS-DCMLTLFQQMQELGYAVNV 235
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ ++R F G + A +L ++M + PDV Y + + + +V+ A +
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHE 295
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M G V D ++YT+++ LC+ +L EA +L M P YNT+++G+ G+
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
DA +LE GC+P++VSY ++ L +G D A K + M K P+ S +
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNI 414
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+I C GK++ A V + + AG P+ T ++V ++C + ++
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 169/394 (42%), Gaps = 26/394 (6%)
Query: 39 ESPSSPEQQQESSISNSKS---PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSN 95
E+ E+ ++ +I N + I C+ KL L+ ++ A PN N
Sbjct: 393 EALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL----ETALVVRDAMKDAGLFPNVITVN 448
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTF 153
I++ +L +A+ L D I +H P TY LI+ D A K +
Sbjct: 449 ----IMVDRLCKAQ--RLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLR-----PAFDLFKSAHKHGVLPNTKSYNIMM 208
ML+ N P ++ RN+ + ++ + G P+ N M
Sbjct: 503 EQMLDANQIPNAVVYTSLI------RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYM 556
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
G+I LF ++ G +PD SY IL+ GL + + A +L M +G V
Sbjct: 557 DCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
DT +Y T+++ C+ K+ +AY+LL MK KG P +V Y +V+ G + R +A +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
E+ S G N+V Y +L+ G G D A M+ ++ KG +P+ + L+
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ EA + + P+ T+ +++ +C
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 162/387 (41%), Gaps = 37/387 (9%)
Query: 89 PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR 148
F SN+T + ++L +++ + T++ + S +T LI + S D
Sbjct: 159 AGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDC 218
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L F+ M E + L L + + A L + + P+ YN+ +
Sbjct: 219 MLTLFQQMQELG-YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCI 277
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
F G + +A+ F++M G++ D +Y ++ LC+ ++N AV+L E M V
Sbjct: 278 DCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P +Y T++ K +AY LL R + KGC P +V YN ++ R+G+ +A K
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF------------ 376
E+M + +PNL +Y ++ LC G + A M G P+
Sbjct: 398 FEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCK 456
Query: 377 ------------SVSH-----------ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ H +LI+G G+VDEA + E++L A + P+
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKV 440
+ ++ E ++ NE++++
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRL 543
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A++LF + + G + +T++YN ++ FC +G ++ AY L +M +G P V +Y
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 241 ILMQGLCRKSQVNRA-------------------------------VD----LLEDMLNK 265
++ GL + +++ A +D ++E+++ K
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ ++ LL++L + +++ EA MK C P+ + Y+ ++ G C+ + A
Sbjct: 719 GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA 778
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++M G PN+ +Y T++ GL G A + KG ++ +A+I+G
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK---LGEVLNEIVKVE 441
N + +A + EE G + + T V+++ + E +E+ +G VL E K +
Sbjct: 839 LSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQ 897
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 37/293 (12%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C P N IL L + + A F+ K + PN +YNIM+ C G + A
Sbjct: 371 CIPSVVSYNCILSCL-GRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + M + G+ P+V + I++ LC+ +++ A + E + +K PD ++Y +L+
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L R ++ EAYKL +M P+ V Y +++ F + GR D K+ +M GC P+
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548
Query: 341 LV-----------------------------------SYRTLVGGLCDQGMFDVAKKYMQ 365
L+ SY L+ GL G A +
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M +G + +I GFC GKV++A +LEE+ G P T+ ++
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 142/320 (44%), Gaps = 4/320 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ILI L +A + ++ T+K + + + +I + +S ++A + M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+P +++ L + L A+ LF+ A G+ N Y+ ++ F G
Sbjct: 646 KTKGHEPTVVTYGSVIDGL-AKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I AY + ++ ++G+ P+V ++ L+ L + +++ A+ + M + P+ ++Y+
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L++ LC+ +K +A+ M+ +G P++ Y T++ G + G ++A + E G
Sbjct: 765 LIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+ + Y ++ GL + A + + KG S + L+ +++A
Sbjct: 825 GVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAA 884
Query: 397 ---GVLEELLKAGEAPHEDT 413
VL E KA A T
Sbjct: 885 IVGAVLRETAKAQHAARSWT 904
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 186/417 (44%), Gaps = 42/417 (10%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK----------- 109
+P +++ DP +A F +A +P F+H+ T +L+ +AK
Sbjct: 42 TPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE 101
Query: 110 ------------YFSLID------------DILITLKSEHYPVTPSLFTYLIKIYAESNL 145
Y ++I+ ++L +K + L + LI+
Sbjct: 102 ELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGR 161
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK-----HGVLPN 200
D AL+ F+SM E C P N ++ L N + A +LF K HG P+
Sbjct: 162 IDEALEQFKSMGE-ECSPNVITYNTVVNGL-CKANRIDEALELFDDMEKRYEASHGCEPD 219
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
SY+ ++ A C + AY F +M G P+V +Y L+ GLC+ + + ++LL
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLL 279
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M KGF + + + +L++L + + +A + R+ G P++V YN V G C+ G
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R +A ++L +M + P++++Y +++ G C G D A M+ PH
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
L+ GF K EA V E+++ AG P T+ +++ +C + +E E+ +++
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 456
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 136/254 (53%), Gaps = 6/254 (2%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN Y ++ FC G + A+ L ++M ERGV DV + L+QGLCRK +++ A++
Sbjct: 108 FPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE 167
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-----GCNPDIVHYNTV 312
+ M + P+ ++Y T++N LC+ ++ EA +L M+ + GC PD++ Y+TV
Sbjct: 168 QFKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTV 226
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ C+ R A + + M + GC PN+V+Y +L+ GLC + + M KGF
Sbjct: 227 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGF 286
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ +A++ + ++AC E LLK+G+ P+ T+ + V +C +++
Sbjct: 287 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYR 346
Query: 433 VLNEIVKVEIKGDT 446
+L E+V+ ++ D
Sbjct: 347 ILLEMVESKVTPDV 360
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 43/350 (12%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQL 168
L DD+ ++ H P + +Y +I ++ D+A + F+ M C P
Sbjct: 200 LELFDDMEKRYEASH-GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258
Query: 169 NRILELLVTHRNYLRPA--FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+ +++ L RP+ +L + G N +N M+ A N + A F +
Sbjct: 259 SSLIDGLC---KVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 315
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ + G P+V +Y + + GLC+ +V+ A +L +M+ PD ++Y+++++ C+ +
Sbjct: 316 LLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 375
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ +A + RM V C P V + T++ GF ++ +A +V EDM + G +P L +Y
Sbjct: 376 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 435
Query: 347 L-----------------------------------VGGLCDQGMFDVAKKYMQLMISKG 371
L + LC D AK+++ +M +
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADN 495
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
P+ ++ HAL++ C G+VDEAC VL+ +++ G P +T+ ++V ++
Sbjct: 496 VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 35/329 (10%)
Query: 119 ITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
I L+ VTP + TY +I + ++ D+A F M+ C P P +L
Sbjct: 347 ILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFS 406
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
H+ R AF + + G +P ++YN++M C + A +++KM + PD
Sbjct: 407 EHKKS-REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y L+Q LCR +V+ A + L+ M VP+ L+ LC++ ++ EA +L
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525
Query: 297 MKVKGCNP--------------------------------DIVHYNTVVLGFCREGRAID 324
+ GC P D Y+ V C+ G+ +
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDE 585
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +V+E M G P+ +Y ++ LC + A + M S+G +P LI
Sbjct: 586 AVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIG 645
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDT 413
C+ DEA + E ++ AG P T
Sbjct: 646 EACSADMADEAFRIFEAMVAAGFTPQAQT 674
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 140/301 (46%), Gaps = 6/301 (1%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY + ++ ++ D A + M+E P + I++ + A D
Sbjct: 323 PNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGF-CKAGRMDKADD 381
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F H +P+ ++ ++ F + A+ + M G +P +++Y +LM +C
Sbjct: 382 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC 441
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
V A+++ M K PD +Y L+ LCR +++ EA + L M+ P+
Sbjct: 442 GADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ +V C++G +AC VL+++ GC P +++ LV L + ++ A K L+
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK---LL 558
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
S GF + + C GK DEA V+E+++ G P E T+V ++ +C + +
Sbjct: 559 RSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618
Query: 428 E 428
E
Sbjct: 619 E 619
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 216 DISIAYTLFNKMFER-GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
D +A+T F + G + + +L+ + + A LL++ L P+ + Y
Sbjct: 55 DPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMY 114
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
TT++N C+ ++ +A++LL MK +G D++ ++T++ G CR+GR +A LE S
Sbjct: 115 TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFKS 171
Query: 335 NG--CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM-----ISKGFSPHFSVSHALIKGFC 387
G C PN+++Y T+V GLC D A + M S G P +I C
Sbjct: 172 MGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALC 231
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+VD+A + + G AP+ T+ ++ +C ++++ E L ++ ++ KG
Sbjct: 232 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLC---KVDRPSECLELLLHMKEKG 285
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 45/285 (15%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
RQP+ +TY LI L RA+ + L +++++ ++ L+++ +
Sbjct: 461 RQPDC----NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 516
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A +++E C+PL + ++E L YLR ++ +A K
Sbjct: 517 DEACSVLDNVVEVGCQPLGETFKILVEEL-----YLRKKWE---AASK------------ 556
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++R+ G + D +Y + + +C+ + + AV+++E M+ KG
Sbjct: 557 LLRS-------------------PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD +Y +L SLC ++ A +M +GC P +V Y ++ C A +A
Sbjct: 598 VRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAF 657
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD--VAKKYMQLMIS 369
++ E M + G P + RTL L D G D V ++ M + IS
Sbjct: 658 RIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVRQRIMTMAIS 702
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 175/376 (46%), Gaps = 8/376 (2%)
Query: 70 ASQSDPLLAKEIFDYASRQPN----FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH 125
A S P LA +F+ A+ + ++ TY IL+ RA L L
Sbjct: 84 ACGSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTG 143
Query: 126 YPVTPSLFTYLIKIYAESNLPDRALKTF-RSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
V + ++L+K + E+ D AL E C P N +L+ L ++
Sbjct: 144 LRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSL-CNQGKSGQ 202
Query: 185 AFDLFKSAHKHGVL--PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A DL + + G + P+ +YN ++ F GD++ A LF +M +RG+ PD+ +Y +
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ LC+ +++A L M+NKG +PD +Y L+ + +EA ++ M+ +
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V NT++ C+ G+ +A V + M G P++ SY ++ G +G
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
LM+ G +P + LIK + N G +D+A + E+ G PH T++ ++ +C
Sbjct: 383 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442
Query: 423 AGEEMEKLGEVLNEIV 438
+M+ E N+++
Sbjct: 443 RIGKMDDAMEKFNQMI 458
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 7/320 (2%)
Query: 129 TPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P +F+Y I + YA F ML P+ N +++ + L A
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY-ANCGMLDKAM 416
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+F HGV P+ +Y ++ A C G + A FN+M ++GV+PD +Y L+QG
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C + +A +L+ +++N G D + + +++N+LC+ ++ +A + G +PD
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN ++ G+C G+ A +V + M S G PN+V Y TLV G C G D +
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI----C 422
M+ KG P + + +I G G+ A E+ ++G A ++ T+ +++ + C
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 423 AGEEMEKLGEVLNEIVKVEI 442
E + E+ VK++I
Sbjct: 657 FDEAIFLFKELRAMNVKIDI 676
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P +TY LI Y+ + A++ F+ M + P LN ++ L + ++ A
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKY-GKIKEA 345
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+F + G P+ SY IM+ + G + LF+ M G+ P + ++ +L++
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+++A+ + +M + G P ++Y T++ +LCR K+ +A + +M +G PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y+ ++ GFC G + A +++ ++ +NG ++V + +++ LC G A+
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
L ++ G P V + L+ G+C VGK+++A V + ++ AG P+ + +V C
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+++ + E+++ IK T
Sbjct: 586 RIDEGLSLFREMLQKGIKPST 606
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 141/318 (44%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P L TY ++A ++ D+A R M+ P N ++ + + + A
Sbjct: 252 IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW-KEA 310
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+FK + +LP+ + N +M + C G I A +F+ M +G PDV SY I++ G
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + DL + ML G P ++ L+ + L +A + M+ G P
Sbjct: 371 YATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH 430
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y TV+ CR G+ DA + M G +P+ +Y L+ G C G AK+ +
Sbjct: 431 VVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 490
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+++ G ++I C +G+V +A + + + G P + M++ C
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 550
Query: 426 EMEKLGEVLNEIVKVEIK 443
+MEK V + +V I+
Sbjct: 551 KMEKALRVFDAMVSAGIE 568
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 21/251 (8%)
Query: 182 LRP--AFDLFKSAHKHGVLPNTKSYNIMMRAF--------CFNGDISIAYTLFNKMFERG 231
LRP A DL + G + N + A C +G ++A LFN+ R
Sbjct: 45 LRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGP-ALAVALFNRAASRA 103
Query: 232 VMPDVES-----YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
P V S Y ILM R + A+ +L G D + + LL C K+
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 287 LREAYK-LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG--CLPNLVS 343
EA LL R GC PD+ YN ++ C +G++ A +L M G C P++V+
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVA 223
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y T++ G +G + A + M+ +G P +++ C +D+A L +++
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 404 KAGEAPHEDTW 414
G P D W
Sbjct: 284 NKGVLP--DNW 292
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 141/363 (38%), Gaps = 37/363 (10%)
Query: 112 SLIDDILITLKS-EHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQL 168
++D +I + V P + TY+ I A + D A++ F M++ P
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469
Query: 169 NRILELLVTHRNYLRP----------------------------------AFDLFKSAHK 194
+ +++ TH + L+ A ++F
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G+ P+ YN++M +C G + A +F+ M G+ P+V Y L+ G C+ +++
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
+ L +ML KG P T+ Y +++ L + A M G + Y+ V+
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G + +A + +++ + ++++ T++ G+ + AK + G P
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+I G V+EA + + AG P +V ++ E+ + G L
Sbjct: 710 CAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYL 769
Query: 435 NEI 437
++I
Sbjct: 770 SKI 772
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 4/291 (1%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
KLGR I D+ + + V ++ L+ Y ++AL+ F +M+ +P
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAV---VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + LF+ + G+ P+T YNI++ G A
Sbjct: 570 NVVGYGTLVNGY-CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F++M E G+ + +Y I+++GL + + A+ L +++ D ++ T++ + +
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+++ EA L + G P V Y+ ++ +EG +A + M + GC P+
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 748
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+V L + A Y+ + + FS + L+ F + G E
Sbjct: 749 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ F+ + N K LN ++ + R + A DLF S + G++P +Y+I
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR-VEEAKDLFASISRSGLVPCAVTYSI 716
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M+ G + A +F+ M G PD +++ L +K+++ RA L + +
Sbjct: 717 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 776
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
F + L+ L++ K RE + L
Sbjct: 777 FSLEHLTAMLLVDLFSSKGTCREQIRFL 804
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 180/364 (49%), Gaps = 7/364 (1%)
Query: 81 IFDYASRQ-PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
F + R P++ HS S++ + R + F+ ++ ++S +P L +
Sbjct: 86 FFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAER 145
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YA P RA++TF SM E N +L++L N + A DL ++ K P
Sbjct: 146 YASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCK-SNRVETAHDLLRTL-KSRFRP 203
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+T SYNI+ +C +A + +M +RG+ P + +Y +++G R +Q+ A +
Sbjct: 204 DTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFY 263
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+M + D +SYTT+++ ++++A ++ M +G P++ YN ++ FC++
Sbjct: 264 LEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKK 323
Query: 320 GRAIDACKVLEDMPSNG-CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+A V E+M G C PN+V++ ++ GLC G + A +M+ M G
Sbjct: 324 DSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQT 383
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL---GEVLN 435
+ +I+ FC+ G++++ V ++ P+ DT+ +++ + ++ E L G++L
Sbjct: 384 YNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLM 443
Query: 436 EIVK 439
E+V+
Sbjct: 444 EMVE 447
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 157/361 (43%), Gaps = 20/361 (5%)
Query: 43 SPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI 102
P + + ++ + IG P R + S + L +++ HS +T L ++
Sbjct: 133 GPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDL-----------HSFNTLLDIL 181
Query: 103 LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
K R + D+L TLKS P T S + L Y AL+ + M++ +
Sbjct: 182 CKSNRVE---TAHDLLRTLKSRFRPDTVS-YNILANGYCLKKRTPMALRVLKEMVQRGIE 237
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +L+ N ++ A++ + K + SY ++ F G++ A
Sbjct: 238 PTMVTYNTMLKGYF-RSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKR 296
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSL 281
+F++M + GV P+V +Y L+Q C+K V AV + E+M+ +G P+ +++ ++ L
Sbjct: 297 VFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGL 356
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C + A + RM G + YN V+ FC G +V M CLPNL
Sbjct: 357 CHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNL 416
Query: 342 VSYRTLVGGLCDQGMFD---VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
+Y L+ + + + VA K + M+ +GF P + ++ G G D A +
Sbjct: 417 DTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDI 476
Query: 399 L 399
L
Sbjct: 477 L 477
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 35/420 (8%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V +++ S SD +A + +A +P F H+ ++ L F L+ + L +
Sbjct: 93 PFVVNRVLRSISDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLERV 152
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH--- 178
+S+ + SL+ L+ Y + D + TF M+ C+ NR + +LV +
Sbjct: 153 RSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCF 212
Query: 179 ---RNYLRPAFD----------------------------LFKSAHKHGVLPNTKSYNIM 207
Y A D L K G P+ + NI
Sbjct: 213 DLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIY 272
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C + + A M+ RG PDV +Y ++ LC Q AV+L E+M+ +G
Sbjct: 273 VDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGL 332
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++ L+ LC+ K+ EA++L RM ++ YN ++ GF R G A K
Sbjct: 333 KPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFK 392
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF-SPHFSVSHALIKGF 386
++ M +NGC P++V+Y + C+ GM A+K ++ M G +P + ++KG
Sbjct: 393 IISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGL 452
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C ++D A G + + ++ G + +++ C +++ ++ E+ I+ D
Sbjct: 453 CKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADA 512
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-PDVESYR 240
+ AF + +G P+ +YNI + +C G I A L +M G++ PD SY
Sbjct: 387 INKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYN 446
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+++GLC+ Q++RA + D + G D +S L+++ C+ KK+ A KL M K
Sbjct: 447 QMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYK 506
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G D V Y T++ G G A ++ E M +PN+ Y ++ LC G F+ A
Sbjct: 507 GIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQA 566
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+K MI K SP + LI + EA + ++ G P
Sbjct: 567 QKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEP 615
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 151/371 (40%), Gaps = 37/371 (9%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
F L++ + + +T ++ I +S + + M +F C P N
Sbjct: 212 FDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNI 271
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
++ L H N L A ++ G P+ +Y ++ C N + A L+ +M R
Sbjct: 272 YVDCLCKH-NRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRR 330
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDML------------------------NKG 266
G+ PD+ + +L+ GLC+ +V+ A +L ML NK
Sbjct: 331 GLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKA 390
Query: 267 FV-----------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVL 314
F PD ++Y LN C ++EA KL+ M++ G NPD YN ++
Sbjct: 391 FKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLK 450
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ + A + D G ++VS L+ C A K + M KG
Sbjct: 451 GLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQA 510
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
LI G VG A + E++LKA P+ + + +++ +C + E+ ++
Sbjct: 511 DAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIF 570
Query: 435 NEIVKVEIKGD 445
++++ E+ D
Sbjct: 571 LQMIQKEVSPD 581
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 4/260 (1%)
Query: 130 PSLFTYLIKI--YAESNLPDRALKTFRSM-LEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY I++ Y + + A K M + P N++L+ L L AF
Sbjct: 404 PDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQ-LDRAF 462
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ G + S NI++ AFC +S A LF +M +G+ D +Y L+ GL
Sbjct: 463 GFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGL 522
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
A ++ E ML VP+ Y +L++LC+ + +A K+ +M K +PDI
Sbjct: 523 YGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDI 582
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ +NT++ + RAI+A + DM + G P+ +++R L+ GL ++G A + +
Sbjct: 583 ITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEY 642
Query: 367 MISKGFSPHFSVSHALIKGF 386
M+ G VS LI F
Sbjct: 643 MLENGIILDRDVSDRLISMF 662
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 8/350 (2%)
Query: 100 ILILKLGRAKY-FSLIDDILITLKSE--HYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+L+L L RA D L+ +S H P T S+ L + + D A K FRS
Sbjct: 124 MLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRV-DLAEKAFRSA 182
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P N ++ L LR A D+ K G+ P+ +YN ++ +C G
Sbjct: 183 LRRRVSPDIYTFNTVISGLC-RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG 241
Query: 217 ISIAY---TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
Y L +M E G+ P ++ +L+ G C+ S AV + E+M +G ++
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +L++ LC + K+ E KL+ M+ G +P+ + + V+ GFC++G DA ++ M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
P++V Y L+ G + A + M KG SP+ + + LI GF G
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
A G+L+E+ + G T+ +++ +C E+ K ++L+E+ +V ++
Sbjct: 422 SASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 158/362 (43%), Gaps = 12/362 (3%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLID 115
I CR+ +L + +AK+I + S +TY LI K G A +D
Sbjct: 198 ISGLCRIGQLRKAGD---VAKDIKAWG-----LAPSVATYNSLIDGYCKKGGAGNMYHVD 249
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + T F LI Y +++ A++ F M + N ++ L
Sbjct: 250 MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + L + G+ PN ++ +++ FC G ++ A + M ER V PD
Sbjct: 310 CSE-GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y IL+ R ++ A+ + E M KG P+ +Y L+ R R A LL
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
MK KG D+V YN ++ C +G A K+L++M G PN ++Y T++ G CD+G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
A + M + + IK FC +GK+DEA +L E+L P+ T+
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548
Query: 416 MI 417
I
Sbjct: 549 TI 550
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 6/324 (1%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFN--CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
L+ A ++ P RA F E + +P +N +L LV + + A F+SA
Sbjct: 125 LVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKR-VDLAEKAFRSAL 183
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ V P+ ++N ++ C G + A + + G+ P V +Y L+ G C+K
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243
Query: 254 RA--VD-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
VD LL++M+ G P +++ L+N C+ A ++ MK +G +V YN
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ G C EG+ + K++E+M G PN +++ ++ G C +GM A ++ M +
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
P + + LI + +GK+++A V E + K G +P+ T+ ++ +
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423
Query: 431 GEVLNEIVKVEIKGDTRIVEAGIG 454
+L+E+ + I+ D IG
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIG 447
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E ++P+ T+ ++K + + + A M E N +P N ++++
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY-RRLGK 384
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + ++ K G+ PN +YN ++ F +GD A L ++M E+G+ DV +Y +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ LC K +V +AV LL++M G P+ L+Y T++ C K ++ AY++ RM+
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++V YN + FC+ G+ +A +L +M +PN ++Y T+ G+ ++G
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + A D + V P+ YNI++ + G + A + M ++G+ P+V +
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT 406
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G R A LL++M KG D ++Y L+ +LC K ++R+A KLL M
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+ + YNT++ GFC +G A ++ M N+V+Y + C G D
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIK 384
A + M+ K P+ +++ IK
Sbjct: 527 EANDLLNEMLDKCLVPN-GITYETIK 551
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 131/246 (53%), Gaps = 2/246 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +++ + G + +T +YNI++ C G ++ AY F M ERG + V +Y LM
Sbjct: 276 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 335
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + V+ AV+L ML++G P+ +SY ++ LCR KL +AY ++ + P
Sbjct: 336 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 395
Query: 305 DIVHYNTVVLGFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D+ +N + G C+ + D ++ E M S G PNL SY L+ G+C G +VA +
Sbjct: 396 DVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEI 455
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+S+G +P V + LI+ C G+VDEA V EL + AP ++ ++ +
Sbjct: 456 FREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR-SAPDAWSYWSLLDGLSR 514
Query: 424 GEEMEK 429
E ME+
Sbjct: 515 CERMEE 520
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 162/372 (43%), Gaps = 35/372 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA------- 149
TY ++I L +A I + + ++T LIK +S P+ A
Sbjct: 114 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA 173
Query: 150 ------------LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ T+ S+++ CK RILE R FD A + G
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKA-----GRILEA--------RQVFD--DEAVERGF 218
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+P+ +Y ++ C G + F++M RG PD +Y L+ G + + +A
Sbjct: 219 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 278
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+ ML G V T++Y +L+ LC+ ++ EAY M+ +GC +V Y+ ++ GFC
Sbjct: 279 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
EG A ++ M GC PNLVSY ++ GLC G A Y + ++ + P
Sbjct: 339 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 398
Query: 378 VSHALIKGFCN-VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+A + G C + V + + E ++ G +P+ ++ +++ IC +E E+ E
Sbjct: 399 TFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFRE 458
Query: 437 IVKVEIKGDTRI 448
+V + D +
Sbjct: 459 MVSRGVAPDVVV 470
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF + + A + G P+ +YN+ + C + A+ L KM E+ +P +Y
Sbjct: 23 LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GL + +++ A+ +LE M+ KG P +YT +++ L + ++ EA ++ M G
Sbjct: 83 LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN----GCLPNLVSYRTLVGGLCDQG-M 356
C PD Y ++ G C+ G+ +A + ++ + +P++V+Y +L+ GLC G +
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRI 202
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ + + + +GF P ++I G C +G+V+E C E+ G P T+
Sbjct: 203 LEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 262
Query: 417 IVPQICAGEEMEKLGEVLNEIVK 439
++ + + K V ++++
Sbjct: 263 LIDGFMKAKMIPKAHRVYRQMLQ 285
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 5/244 (2%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ ++ +++ C + A+++ + G PD +Y + + GLC+ +V+ A L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ M K +P T++YT L++ L + +L EA +L +M KG +P + Y V+ G +
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK-YMQLMISKGFS---P 374
GR +A ++ DM NGC P+ Y L+ GLC G + A Y + K + P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 375 HFSVSHALIKGFCNVGKVDEACGVL-EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+LI G C G++ EA V +E ++ G P T+ I+ +C +E+ E
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 434 LNEI 437
+E+
Sbjct: 245 FHEM 248
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L +Y +I+ + +A F +L+ P N L L + + +
Sbjct: 360 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVE 419
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+S G PN SY+I+M C G + +A +F +M RGV PDV + L++ LC
Sbjct: 420 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLC 479
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V+ A+++ + L + PD SY +LL+ L R +++ EA L MK++GC P
Sbjct: 480 IAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR-- 536
Query: 308 HYNTVV 313
HY+ V
Sbjct: 537 HYDLTV 542
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C+PD+V + V+ G CRE R +A VLE GC P+ V+Y + GLC D A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ M K P AL+ G G++DEA VLE++++ G +P T+ +++ +
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 422 CAGEEMEK 429
+E+
Sbjct: 123 SKAGRVEE 130
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 51/103 (49%)
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P++V++ ++ GLC + D A ++ + G P + + I G C +VD+A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+L+++ + P T+ +V + +++ VL ++V+
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVE 105
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 149/293 (50%), Gaps = 5/293 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI Y+ + L D+A + +R M+ P N +L + + + +L+ A L
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLL-MGLCRKGWLQEARILLYRM 518
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G N +Y +++ + ++ A L+ +M ERG+ PD ++ L+ GL + V
Sbjct: 519 LEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNV 578
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A ++ +M GFVP+ +Y +L+ LC ++ EA KL M+ KG D +N +
Sbjct: 579 EEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNII 638
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV--AKKYMQLMISK 370
+ GFCR G+ A + DM G LP++ ++ L+GG C FD+ A + + M S
Sbjct: 639 IDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKA--FDMVGAGEIVNKMYSC 696
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
G P + + + G+C + K+++A +L++L+ AG P T+ ++ IC+
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS 749
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 154/310 (49%), Gaps = 10/310 (3%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
F S+ST L++ L R + +L + + +P+ +T L+ Y + N + A
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
++ M E P +++ L N + A+++F G +PN +YN ++R
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGN-VEEAYEVFLEMSAIGFVPNNFAYNSLIR 605
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C G ++ A L +M ++G++ D ++ I++ G CR+ Q+ A++ DM G +P
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLP 665
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++ L+ C+ + A +++ +M G +PDI YNT + G+CR + A +L
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725
Query: 330 EDMPSNGCLPNLVSYRTLVGGLC----DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ + S G +P+ V+Y T++ G+C D+ M AK ++ GF P+ ++ L+
Sbjct: 726 DQLISAGIVPDTVTYNTMLSGICSDILDRAMILTAK-----LLKMGFIPNVITTNMLLSH 780
Query: 386 FCNVGKVDEA 395
FC G ++A
Sbjct: 781 FCKQGMPEKA 790
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 181/405 (44%), Gaps = 30/405 (7%)
Query: 10 SKIVTTVTGAVTFPPKTPSLIFC--------YSSSSQESPSSPEQQQESSISNSKSPIGS 61
S I+ T G FP K SL FC ++++ + + S+S+ +
Sbjct: 70 STILKTDQG---FPLKAFSLRFCPFFLVKIMKLFKTRDAAFAFFKLAFGDCSDSEEILRL 126
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
C ++A+Q LLA+++ + LI ++G + ++D +
Sbjct: 127 SCVAAHVLAAQKLQLLAQDVVSW----------------LIARVGTGRTNKIVD--FMWR 168
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
Y S+ L++ + + AL+ R M +P + +L LL+ +Y
Sbjct: 169 NHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDY 228
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ LFK G P+ ++N M+ FC + + +L + M + PDV ++ I
Sbjct: 229 -GSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C + A+D L M+ G P ++TT+L++LCR+ + EA KL ++ G
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ YNT++ G+ + A + E+M + G P+ V++ LV G G + +
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ ++ +I G S+ ++ C G++DEA +L+ELL+ G
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKG 452
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV----------- 236
L K G+ ++ Y++M+ + C+ G + A L ++ E+G+ V
Sbjct: 409 LLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYS 468
Query: 237 ---------ESYRI---------------LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
E+YRI L+ GLCRK + A LL ML KGF + +
Sbjct: 469 RAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKV 528
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT LL+ + L A L MK +G PD V + ++ G + G +A +V +M
Sbjct: 529 AYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEM 588
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ G +PN +Y +L+ GLCD G A K + M KG + +I GFC G++
Sbjct: 589 SAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQM 648
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
A ++ + G P T+ +++ C +M GE++N++ + D
Sbjct: 649 KFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPD 701
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ ++NI++ A C G +A + M GV P V ++ ++ LCR+ V A L
Sbjct: 280 PDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKL 339
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
+ + + G P+ Y TL++ + +++ +A L M+ G +PD V +N +V G +
Sbjct: 340 FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYK 399
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
GR D+ ++L+D+ +G + Y +V LC G D A K +Q ++ KG +
Sbjct: 400 YGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVA 459
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++LI + G D+A +++ G P T ++ +C
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLC 503
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 156 MLEFNCKPLPKQLNRILELL-VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M +F C P N ++ + R ++ A D + GV P+ ++ ++ A C
Sbjct: 273 MPKFMCSPDVVTFNILINACCIGGRTWV--AIDWLHLMVRSGVEPSVATFTTILHALCRE 330
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G++ A LF+ + + G+ P+ Y LM G + +V +A L E+M G PD +++
Sbjct: 331 GNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTF 390
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
L+ + ++ ++ +LL + V G D Y+ +V C GR +A K+L+++
Sbjct: 391 NILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE 450
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G ++V++ +L+G G+ D A + ++M+ GF+P S ++L+ G C G + E
Sbjct: 451 KGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQE 510
Query: 395 ACGVLEELLKAG 406
A +L +L+ G
Sbjct: 511 ARILLYRMLEKG 522
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 1/292 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ M+ +P IL L N + A LF G+ PN YN +M
Sbjct: 301 AIDWLHLMVRSGVEPSVATFTTILHALCREGNVVE-ARKLFDGIQDMGIAPNAAIYNTLM 359
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ +++ A L+ +M GV PD ++ IL+ G + ++ + LL+D++ G
Sbjct: 360 DGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLF 419
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D+ Y +++SLC +L EA KLL + KG +V +N+++ + R G A +
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
M G P+ + +L+ GLC +G A+ + M+ KGF + L+ G+
Sbjct: 480 YRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFK 539
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+ ++ A + +E+ + G P + ++ + +E+ EV E+ +
Sbjct: 540 MNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ + GV P S I++R GD + LF M +G P ++ ++
Sbjct: 196 ALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMIC 255
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G CR+ +V LL M PD +++ L+N+ C + A L M G P
Sbjct: 256 GFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEP 315
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + T++ CREG ++A K+ + + G PN Y TL+ G A
Sbjct: 316 SVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLY 375
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-A 423
+ M + G SP + L+ G G+++++ +L++L+ +G + ++V +C A
Sbjct: 376 EEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWA 435
Query: 424 G---EEMEKLGEVLNEIVKVEIKGDTRIVEA--GIGLED 457
G E M+ L E+L + + + + ++ A GLED
Sbjct: 436 GRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++R F G A + M GV P + S IL++ L R L +DM+
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG P L++ ++ CR+ ++ LL M C+PD+V +N ++ C GR
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWV 300
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A L M +G P++ ++ T++ LC +G A+K + G +P+ ++ + L+
Sbjct: 301 AIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMD 360
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G+ +V +A + EE+ G +P T+ ++V
Sbjct: 361 GYFKAREVAQASLLYEEMRTTGVSPDCVTFNILV 394
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D L++G A+++L M G P S T LL L R +KL
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M KG P + +N ++ GFCR+ R + +L MP C P++V++ L+ C
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
G VA ++ LM+ G P + ++ C G V EA + + + G AP+
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPN 351
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 4/188 (2%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV S+ I G R N+ VD + + + D TLL EA ++L
Sbjct: 145 DVVSWLIARVGTGR---TNKIVDFMWRN-HAMYESDFSVLNTLLRGFLNVGMGFEALEVL 200
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M+ G P + ++ R G K+ +DM G P+ +++ ++ G C Q
Sbjct: 201 RMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQ 260
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
V + + LM SP + LI C G+ A L ++++G P T+
Sbjct: 261 HRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATF 320
Query: 415 VMIVPQIC 422
I+ +C
Sbjct: 321 TTILHALC 328
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G++P+T +YN M+ C + + A L K+ + G +P+V + +L+ C++ +A
Sbjct: 732 GIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKA 790
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+ + + F D +SY L + C
Sbjct: 791 LIWGQKLREISFGFDEISYRILDQAYC 817
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%)
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D NT++ GF G +A +VL M G P L S L+ L G + K
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI KG P +A+I GFC +V +L + K +P T+ +++ C G
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 34/393 (8%)
Query: 63 CRVQKLIASQS-DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
C V K++ S D + A F + Q + H +Y +++ LG+ K F L+ ++ +
Sbjct: 133 CLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQM 192
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN- 180
++ T +++ A ++ A+ F M F K +N +L+ L R+
Sbjct: 193 VEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSV 252
Query: 181 --------------------------------YLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L+ A D + +HG P+ +Y ++
Sbjct: 253 KRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLV 312
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A+C D Y L ++M +R P+V +Y ILM L + + A+D + + G
Sbjct: 313 EAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVA 372
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD Y +L+ L R +L +AY ++ M+ G P++ +NT++ C +A +A K+
Sbjct: 373 PDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKL 432
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M C P++ +Y L+ C + + + M K SP FS L+ C
Sbjct: 433 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCR 492
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
GKV ++C LEE++ G AP ++T+ +++ ++
Sbjct: 493 NGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 525
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 11/245 (4%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR-- 179
+ + +PS+ TY L++ Y M + C P N + ++ H
Sbjct: 297 KQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPP-----NVVTYTILMHALG 351
Query: 180 --NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R A D F + GV P+ YN ++ G + AY++ +M G+ P+V
Sbjct: 352 KAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVT 411
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ L+ C SQ A+ LL M + PD +YT LL C+++ ++ L+C M
Sbjct: 412 TFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHM 471
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K +PD Y +V CR G+ +C LE+M S G P ++ ++ L + +
Sbjct: 472 FRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQ 531
Query: 358 DVAKK 362
V KK
Sbjct: 532 SVYKK 536
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 40/278 (14%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N ++N ++ + G+++ A +F++M ++ +P++ +Y L+ GLC + V+ + L+
Sbjct: 32 NLATWNTLLTSHSLQGNLTGAIRVFHEMPDKN-LPNMVTYNSLIHGLCMTNGVDSTLLLM 90
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E+M G +PD +Y TL++ LC+ ++ EA +L MK K CNPD++ Y+ ++ GFC+
Sbjct: 91 EEMTATGCLPDINTYNTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKL 150
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
R AC + +DM LP++V++ TLV G C+ G+ D A++ ++ M++ SP
Sbjct: 151 DRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 210
Query: 380 HALIKGFCNV---------------------------------------GKVDEACGVLE 400
+L+ FC V G++ A +LE
Sbjct: 211 TSLVDDFCKVKRMVEAHRVLKRMAKGGSNKNCKADMFAYRMMMDGLCRTGRMSAALELLE 270
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ ++G P D +V ++ +C G+E+ K EVL E+
Sbjct: 271 AIKQSGTPPRHDIYVALIRGLCQGKELRKAMEVLEEMT 308
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 129/258 (50%), Gaps = 6/258 (2%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A++ F M + N + + I L +T N + L + G LP+ +YN ++
Sbjct: 52 AIRVFHEMPDKNLPNMVTYNSLIHGLCMT--NGVDSTLLLMEEMTATGCLPDINTYNTLI 109
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C G + A LF +M + PDV +Y L+ G C+ ++N A L +DML + +
Sbjct: 110 DGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAAL 169
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD +++ TL+ C + +A +LL M C+PD+ Y ++V FC+ R ++A +V
Sbjct: 170 PDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRV 229
Query: 329 LEDMPSNG----CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
L+ M G C ++ +YR ++ GLC G A + ++ + G P + ALI+
Sbjct: 230 LKRMAKGGSNKNCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 289
Query: 385 GFCNVGKVDEACGVLEEL 402
G C ++ +A VLEE+
Sbjct: 290 GLCQGKELRKAMEVLEEM 307
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
K+ ++ ++ ++ L+ + + A+ + +M +K P+ ++Y +L++ LC
Sbjct: 23 KILDKMPAWNLATWNTLLTSHSLQGNLTGAIRVFHEMPDKNL-PNMVTYNSLIHGLCMTN 81
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+ L+ M GC PDI YNT++ G C+ GR +A ++ +M + C P++++Y
Sbjct: 82 GVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYS 141
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
L+GG C ++A M+ + P L++G+CN G VD+A +LEE++ +
Sbjct: 142 CLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVAS 201
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+P T+ +V C + M + VL + K
Sbjct: 202 DCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMAK 235
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+D +L+K + ++ TLL S + L A ++ M K P++V YN+++ G
Sbjct: 18 LDETTKILDKMPAWNLATWNTLLTSHSLQGNLTGAIRVFHEMPDKNL-PNMVTYNSLIHG 76
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C ++E+M + GCLP++ +Y TL+ GLC G A + M +K +P
Sbjct: 77 LCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEANRLFGEMKAKFCNPD 136
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
LI GFC + +++ AC + +++LK P T+ +V C ++ +L
Sbjct: 137 VITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLE 196
Query: 436 EIVKVEIKGD 445
E+V + D
Sbjct: 197 EMVASDCSPD 206
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 30/165 (18%)
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS------------------------------ 334
D V +N + GF + G + K+L+ MP+
Sbjct: 1 DAVCWNAIATGFSQCGLLDETTKILDKMPAWNLATWNTLLTSHSLQGNLTGAIRVFHEMP 60
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+ LPN+V+Y +L+ GLC D M+ M + G P + + LI G C G+V E
Sbjct: 61 DKNLPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPE 120
Query: 395 ACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
A + E+ P T+ ++ C + + + ++++K
Sbjct: 121 ANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLK 165
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 161/347 (46%), Gaps = 11/347 (3%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALK 151
RH +T + +L A + L ++ T I +A + DRALK
Sbjct: 52 RHHEAT----VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALK 107
Query: 152 TFRSMLEFNCK-PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
TF + C+ P + N +L+ L+ N + ++ + K GV PN +YN+++RA
Sbjct: 108 TFYRASDLGCRDPGVRVYNHLLDALL-RENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRA 166
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C N + A + ++M +G PD S+ ++ G+C+ +V A L + VP
Sbjct: 167 LCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPV 221
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
SY ++++LC + ++ E + ++ M +G P++V Y T+V FC+ AC +L
Sbjct: 222 QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 281
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M S GC PN++++ LV G + G A M+ +G++P + LI+G C +G
Sbjct: 282 RMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIG 341
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ A + + P+ T+ +V +++ + NE+
Sbjct: 342 DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 388
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 9/337 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNL 145
QPN TY ++ +A+ + IL + S TP++ FT L+K + E
Sbjct: 254 QPNV----VTYTTIVDAFCKARELRMACAILARMVS--MGCTPNVLTFTALVKGFFEDGK 307
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
AL + M++ P N ++ L + L+ A D F S ++ +LPN +Y+
Sbjct: 308 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD-LKGALDFFNSMKRNALLPNATTYS 366
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ F GD+ A ++N+M G P+V Y ++ LC+K ++A L++ ML
Sbjct: 367 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 426
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P+T+++ TL+ LC ++ A + M+ GC+P+ YN ++ G REG DA
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M +NG +LV+Y T++ LC M A + M+ +G P +A+I
Sbjct: 487 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+C GKV A +L ++ + + +++ ++C
Sbjct: 547 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 583
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D ++K + ++ L+ ++ + D A+ + M CKP ++++L
Sbjct: 348 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 407
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ A L PNT ++N ++ C G + A +F+ M G P+
Sbjct: 408 CK-KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 466
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y L+ GL R+ A ++ +MLN GF ++Y T++N LC+ + A LL
Sbjct: 467 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 526
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
RM V+G PD +N ++ +C+EG+ A +L M + C N+V+Y L+ LC+QG
Sbjct: 527 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 586
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKG-FCNVGKV 392
A Y+ M+ +G P+ + + L++ F N+G +
Sbjct: 587 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 624
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 113/229 (49%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F + + G+ PN +Y ++ AFC ++ +A + +M G P+V ++ L++G
Sbjct: 242 FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKG 301
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+V+ A+ + M+++G+ P T+SY L+ LC L+ A MK P+
Sbjct: 302 FFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN 361
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y+T+V GF G A + +M S+GC PN+V Y ++ LC + MFD A+ +
Sbjct: 362 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 421
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M+ P+ + LI C+ G+V A V + + G P++ T+
Sbjct: 422 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 470
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLCDQ 354
R++ C D + + F R G A A K GC P + Y L+ L +
Sbjct: 78 RLRGVACTEDALV--AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRE 135
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M M G P+ + LI+ C +VD A +L+E+ + G P E +
Sbjct: 136 NMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSH 195
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVE 441
IV +C +E+ L E V V+
Sbjct: 196 GTIVSGMCKLGRVEEARGFLAETVPVQ 222
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 124/224 (55%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+GV PN + +NIM A+ I A +FNKM ++G+ PDV S+ L+ LC+ +V+
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
AV M+N+G P+ +++L+ LC K +A +L + +G D V +NT++
Sbjct: 390 AVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMC 449
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C EGR ++A ++++ M G PN++SY TLV G C G D A K + +M+S G P
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKP 509
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ L++G+C +VD+A + E+L G P T+ I+
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 166/369 (44%), Gaps = 39/369 (10%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++ + + + P +T +I ++ + DRA F+ M++ KP N ++
Sbjct: 182 NLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGY 241
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
++ + + + + HG+ P+ +Y +++ C NG A F+ MF +G+ PD
Sbjct: 242 LSTGKW-KEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPD 300
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y IL+ G K ++ L+ M+ G P+ + + + +K + EA +
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC--- 352
+M+ +G +PD+V + ++ C+ GR DA M + G PN+ + +LV GLC
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVG 420
Query: 353 -------------DQGM------FDV-------------AKKYMQLMISKGFSPHFSVSH 380
DQG+ F+ A++ + LMI G P+ +
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYN 480
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
L+ G C G++DEA +L+ ++ G P+E T+ +++ C ++ + E++
Sbjct: 481 TLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREML-- 538
Query: 441 EIKGDTRIV 449
+KG T +V
Sbjct: 539 -MKGVTPVV 546
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 152/347 (43%), Gaps = 10/347 (2%)
Query: 97 TYLILI---LKLGRAKY-FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
TY ILI ++GR ++ F+ IL T + V + + L+K ++ D A
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKT----GWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 153 FR-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
M EF C P N ++ + A++LF G+ PN +Y ++
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFF-REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A +F +M +RGV PD +Y L+ G + V +LE+M G PD
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y LL+ LC+ + REA M KG PD+ Y ++ G+ +G + L+
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M NG PN + + + M + A M +G SP ALI C +G+
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
VD+A +++ G P+ + +V +C + EK E+ E++
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +F + G+ P+ S+ ++ A C G + A FN+M GV P++ +
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS 411
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC + +A +L ++L++G D + + TL+ +LC + ++ EA +L+ M G
Sbjct: 412 LVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVG 471
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+++ YNT+V G C GR +A K+L+ M SNG PN +Y L+ G C D A
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAY 531
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ M+ KG +P + + ++ G G+ EA
Sbjct: 532 SLFREMLMKGVTPVVATYNTILHGLFQTGRFSEA 565
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 5/266 (1%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER---GVMPDVESYRILM 243
+L A V + ++ RA C + + +LF +M V P+ +Y IL+
Sbjct: 39 ELLHCARPASVRAFNQLLTVVSRAGCSSASERVV-SLFTRMARECSSKVAPNACTYSILI 97
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK-LLCRMKVKGC 302
CR ++ +L G+ + + + LL LC K++ EA LL RM GC
Sbjct: 98 GCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGC 157
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+V YNTV+ GF REG+ A + +M G PN+V+Y T++ GLC + D AK
Sbjct: 158 PPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKG 217
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
Q MI +G P + LI G+ + GK E +LEE+ G P T+ +++ +C
Sbjct: 218 VFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLC 277
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ + + + IK D I
Sbjct: 278 KNGRCREARLFFDSMFRKGIKPDVAI 303
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 133/300 (44%), Gaps = 4/300 (1%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + D A+ F M+ P + ++ L T + A +LF
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKW-EKAEELFFEV 432
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ + +N +M C G + A L + M GV P+V SY L+ G C ++
Sbjct: 433 LDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI 492
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL+ M++ G P+ +YT LL C+ +++ +AY L M +KG P + YNT+
Sbjct: 493 DEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTI 552
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G + GR +A ++ +M ++ ++ +Y ++ GLC D A K + + SK
Sbjct: 553 LHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDP 612
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ +I G+ ++A + + G P T+ +I + E LGE
Sbjct: 613 QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLI---EEGSLGE 669
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 114/231 (49%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G+ PN +Y I++R +C + AY+LF +M +GV P V +Y ++ GL + + +
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +L +M+N D +Y +LN LC+ + EA+K+ R+ K D V +N ++
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+ GR DA + + + G +P++V+YR + L ++G M G +P
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAP 684
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ + +AL++ + G + A L +L + + T M++ GE
Sbjct: 685 NSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGE 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 36/277 (12%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V PN +Y+I++ FC G + + F + + G +V L++GLC +V+ A
Sbjct: 86 VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145
Query: 257 D-LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
D LL M G PD ++Y T++N R+ ++ +AY L M +G P++V Y TV+ G
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205
Query: 316 FCRE-----------------------------------GRAIDACKVLEDMPSNGCLPN 340
C+ G+ + ++LE+M ++G P+
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
++Y L+ LC G A+ + M KG P ++ L+ G+ G + E L+
Sbjct: 266 CITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLD 325
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G +P+ + ++ +E+ + N++
Sbjct: 326 LMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV PN SYN ++ C G I A L + M G+ P+ +Y IL++G C+ +V+ A
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDA 530
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L +ML KG P +Y T+L+ L + + EA +L M DI YN ++ G
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ +A K+ + S + V++ ++G L G + A + + G P
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ + G + E G+ + K+G AP+ +V ++ ++ + G L
Sbjct: 651 VVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYL 709
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 3/258 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ +Y L+ + + D A K M+ KP +L R + A
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR-VDDA 530
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ LF+ GV P +YN ++ G S A L+ M D+ +Y I++ G
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + V+ A + + +K D++++ ++ +L + + +A L + G PD
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y + EG + + M +G PN LV L +G A Y+
Sbjct: 651 VVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLY 710
Query: 366 LMISKGFSPHFSVSHALI 383
+ K FS S + LI
Sbjct: 711 KLDEKNFSLEASTTSMLI 728
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 21/212 (9%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+TY ++ L + FS +++ + + + + ++ ++N D A K FR
Sbjct: 547 ATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRR 606
Query: 156 MLEFNCKPLPKQLNRIL------ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ C P QL+ + LL R A DLF + +G++P+ +Y ++
Sbjct: 607 L----CSKDP-QLDSVTFNIMIGALLKGGRK--EDAMDLFATISAYGLVPDVVTYRLIAE 659
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
G + LF+ M + G P+ L++ L + ++RA L + K F
Sbjct: 660 NLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSL 719
Query: 270 DTLSYTTLLNSLCRK-------KKLREAYKLL 294
+ S T++L SL + K L E Y+ L
Sbjct: 720 EA-STTSMLISLYSRGEYQPHAKSLPEKYRFL 750
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 157/298 (52%), Gaps = 6/298 (2%)
Query: 129 TPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P+L +Y I I +S D+A+ F+ M++ P +++ L R ++ A+
Sbjct: 202 SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRR-VKEAY 260
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRILMQG 245
DLF+ A G P +YN M+ C G I A TL++ M E + PD+ +Y L+ G
Sbjct: 261 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING 320
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNP 304
L ++ +A +L E+ML+ G PD ++Y TLL+ LC+ +A ++ +M V C+P
Sbjct: 321 LNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP 380
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ Y ++ FC+ R DA K+ ++M LP+ V++ T++ LC + D A +
Sbjct: 381 NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ I K P + + ++ G+C + ++D+A + + +L +G AP T+ +V C
Sbjct: 441 E-SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFC 497
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 183/416 (43%), Gaps = 77/416 (18%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V K+I DP A E+F +A +Q F H+ T
Sbjct: 69 PDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFT------------------------ 104
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
L+ +Y ++ + A F+S ++ +P N ++ +
Sbjct: 105 -----------CNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGD- 152
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-PDVESYR 240
++ A LF G+ +S+NI++R C G IS+A+ +F M G+ P++ SY
Sbjct: 153 VKKALALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYT 209
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ GLC+ +V++A+ L + M++K PD ++Y L++ L ++++++EAY L + K
Sbjct: 210 IMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 269
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP--------------------------- 333
GC+P +V YNT++ G C+ GR +A + +DM
Sbjct: 270 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEK 329
Query: 334 ---------SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM-ISKGFSPHFSVSHALI 383
GC P++V+Y TL+ GLC G D A + + M + P+ LI
Sbjct: 330 AYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLI 389
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
FC V ++ +A + +E+ P T+ ++ ++C +++ E+ I K
Sbjct: 390 DRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGK 445
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLF 133
A ++D R+P+ + TY LI L + K + L +++L T +P +
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT------GCSPDVV 347
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFN-CKPLPKQLNRILELLVTHR----NYLRPAF 186
TY L+ +S D+A++ FR M N C P N I ++ R + L A
Sbjct: 348 TYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP-----NVITYTVLIDRFCKVDRLGDAV 402
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L K +LP+ ++ +++ C I A+ LF + + PD + ++ G
Sbjct: 403 KLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGY 461
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++++ A L + ML+ G P +YT L+ CR + +A + M G P+
Sbjct: 462 CKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F K G+ P S+N ++ C +GD+ + L M GV PDV ++ L+ GLC
Sbjct: 270 VFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLC 329
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +++ L ++M +G VP+ +++TTL++ C+ K+ A K M +G PD+V
Sbjct: 330 KEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLV 389
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ G C+ G +A +++ +M ++G P+ +++ TL+ G C G + A + + M
Sbjct: 390 TYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM 449
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G ALI G C G+V +A +L ++L AG P + T+ M++ C ++
Sbjct: 450 VEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDV 509
Query: 428 EKLGEVLNEI 437
+ ++L E+
Sbjct: 510 KMGFKLLKEM 519
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 200/462 (43%), Gaps = 71/462 (15%)
Query: 22 FPPKTPSLIFCYSSSSQESPSSPEQQ-QESSISNSKSPIGSPCRVQKLIASQS---DPLL 77
FP K L+ S + +S + E+ E+ P +P V KLI P
Sbjct: 42 FPYKDHDLLCEISEAINDSETKHEKGYSENPRLKRILPSLTPRHVSKLITLNPLCLPPSS 101
Query: 78 AKEIFDYASRQPNFRHSNSTYL--------------------ILILKLGRAKYFSLIDDI 117
F++ + +P FRH+ +Y L+ + G +L I
Sbjct: 102 LLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSI 161
Query: 118 LITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
L T+ H+ +F LI Y +S A++ FR ++ N P+P R E L
Sbjct: 162 LRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFR-LVTKNKFPVPI---RGCENL 217
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ LRP +I ++ L+ ++ + G P
Sbjct: 218 LRRVVRLRPV------------------------------EIERSWALYLEVLDSGYPPK 247
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ + +LM G C+ V A + +++ +G P +S+ TL++ C+ + E ++L
Sbjct: 248 IYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKG 307
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M+ +G PD+ ++ ++ G C+EGR + + ++M G +PN V++ TL+ G C G
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D+A K Q+M+++G P +ALI G C VG + EA ++ E+ +G P + T+
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFT 427
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED 457
++ C +ME +EIK R+VE GI L+D
Sbjct: 428 TLIDGCCKDGDMES---------ALEIK--RRMVEEGIELDD 458
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 121/231 (52%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G++PN ++ ++ C G + +A F M +GV PD+ +Y L+ GLC
Sbjct: 340 LFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLC 399
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + A L+ +M G PD +++TTL++ C+ + A ++ RM +G D V
Sbjct: 400 KVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDV 459
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ ++ G CREGR DA ++L DM S G P+ +Y ++ C +G + K ++ M
Sbjct: 460 AFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM 519
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S G P +AL+ G C G++ A +L+ +L G AP++ T+ +++
Sbjct: 520 QSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L GV P+ +++ ++ C G + LF++M RG++P+ ++ L+
Sbjct: 302 GFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLID 361
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ +V+ A+ + ML +G PD ++Y L+N LC+ L+EA +L+ M G P
Sbjct: 362 GQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKP 421
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + + T++ G C++G A ++ M G + V++ L+ GLC +G A + +
Sbjct: 422 DKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRML 481
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+S GF P +I FC G V +L+E+ G P T+ ++ +C
Sbjct: 482 TDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 541
Query: 425 EEMEKLGEVLNEIVKVEI 442
+M+ +L+ ++ V +
Sbjct: 542 GQMKNAKMLLDAMLNVGV 559
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A F+ GV P+ +YN ++ C GD+ A L N+M G+ PD ++ L+
Sbjct: 372 ALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLID 431
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ + A+++ M+ +G D +++T L++ LCR+ ++ +A ++L M G P
Sbjct: 432 GCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKP 491
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D Y V+ FC++G K+L++M S+G +P +V+Y L+ GLC QG AK +
Sbjct: 492 DDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLL 551
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVG 390
M++ G +P+ + L+ G G
Sbjct: 552 DAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + D ALK F+ ML +P N ++ L + L+ A L
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD-LKEARRLVNEM 414
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+ P+ ++ ++ C +GD+ A + +M E G+ D ++ L+ GLCR+ +V
Sbjct: 415 TASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRV 474
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L DML+ GF PD +YT +++ C+K ++ +KLL M+ G P +V YN +
Sbjct: 475 HDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNAL 534
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
+ G C++G+ +A +L+ M + G PN ++Y L+ G G
Sbjct: 535 MNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 8/156 (5%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI A + ML KP +++ + ++ F L K
Sbjct: 461 FTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCK-KGDVKMGFKLLKEM 519
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G +P +YN +M C G + A L + M GV P+ +Y IL+ G S+
Sbjct: 520 QSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDG---HSKH 576
Query: 253 NRAVDLLEDMLN--KGFVPDTLSYTTLLNSLCRKKK 286
+VD+ D+ N KG V D SYT L+N + K
Sbjct: 577 GSSVDV--DIFNSEKGLVTDYASYTALVNESSKTSK 610
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 183/383 (47%), Gaps = 38/383 (9%)
Query: 74 DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLF 133
+P F +A P++ HS + +I L + ++F +L + +PS+
Sbjct: 57 EPFFIFHFFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVL 116
Query: 134 TYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH---RNYLRPAFDLFK 190
T L++I+ + P+ + +L +V H A +F+
Sbjct: 117 TSLVRIHDD----------------------PEVNSHVLSWIVIHYAKSKMTHDAVQVFE 154
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+ P+ + ++M + +G S+ + ++ +M + GV+P++ Y L+ +
Sbjct: 155 QMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSR 214
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
V RA +L +M KG VPD +Y TL+ C+K EA + +M+ +G N DIV YN
Sbjct: 215 DVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYN 274
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ GFC+EG+ +A ++ ++ +PN V+Y TL+ G C F+ A + ++M++K
Sbjct: 275 SLIYGFCKEGKMREAMRMFGEIKD--AIPNHVTYTTLIDGYCKANEFEEALRLREMMVAK 332
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P +++++ C+ G++ +A +L E+ + T ++ C K+
Sbjct: 333 GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYC------KI 386
Query: 431 GEVLNEIVKVEIKGDTRIVEAGI 453
G+ LN +K + T+++EAG+
Sbjct: 387 GD-LNSALKFK----TKMLEAGL 404
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P +YN ++R C +G I A L ++M ER V D + L+ C+ +N A
Sbjct: 333 GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSA 392
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ ML G P++ +Y L++ C+ +L A +LL M G +P+ Y+ +V
Sbjct: 393 LKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDS 452
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+C++ + ++ S G N+ YR L+ LC + A+K + M KG S
Sbjct: 453 YCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGD 512
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLK 404
+ +L + G + A +LEE+ +
Sbjct: 513 SVIYTSLAFSYWKSGNTNAASDMLEEMAR 541
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 38/275 (13%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y ++N + AL+ M+ P N IL L + +R A L
Sbjct: 306 YTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCS-DGRIRDANKLLHEM 364
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ V ++ + N ++ A+C GD++ A KM E G+ P+ +Y+ L+ G C+ S++
Sbjct: 365 SERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSEL 424
Query: 253 NRAVDLL-----------------------------------EDMLNKGFVPDTLSYTTL 277
A +LL ++ L+KGF + Y L
Sbjct: 425 ESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRAL 484
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ LC+ +++ A KLL M+ KG + D V Y ++ + + G A +LE+M
Sbjct: 485 IRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRL 544
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + YR D V++ + ++ +G
Sbjct: 545 MITVKIYRCFSA--LDASQNKVSQMFWDHVVERGL 577
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 34/393 (8%)
Query: 63 CRVQKLIASQS-DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
C V K++ S D + A F + Q + H +Y +++ LG+ K F L+ ++ +
Sbjct: 192 CLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQM 251
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN- 180
++ T +++ A ++ A+ F M F K +N +L+ L R+
Sbjct: 252 VEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSV 311
Query: 181 --------------------------------YLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L+ A D + +HG P+ +Y ++
Sbjct: 312 KRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLV 371
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A+C D Y L ++M +R P+V +Y ILM L + + A+D + + G
Sbjct: 372 EAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVA 431
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD Y +L+ L R +L +AY ++ M+ G P++ +NT++ C +A +A K+
Sbjct: 432 PDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKL 491
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M C P++ +Y L+ C + + + M K SP FS L+ C
Sbjct: 492 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCR 551
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
GKV ++C LEE++ G AP ++T+ +++ ++
Sbjct: 552 NGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 584
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 11/245 (4%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR-- 179
+ + +PS+ TY L++ Y M + C P N + ++ H
Sbjct: 356 KQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPP-----NVVTYTILMHALG 410
Query: 180 --NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R A D F + GV P+ YN ++ G + AY++ +M G+ P+V
Sbjct: 411 KAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVT 470
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
++ L+ C SQ A+ LL M + PD +YT LL C+++ ++ L+C M
Sbjct: 471 TFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHM 530
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K +PD Y +V CR G+ +C LE+M S G P ++ ++ L + +
Sbjct: 531 FRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQ 590
Query: 358 DVAKK 362
V KK
Sbjct: 591 SVYKK 595
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 126 YPVTPSLFTYLI-KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+P + LI K E ++ D L F + + +P N ++ L RN L
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKL-IFNEIRKRGLRPTTVSFNTLINGLCKSRN-LDE 276
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F L K+ ++ + P+ +Y++++ C G + +A LF++M +RG+ P+ ++ L+
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G R +++ A++ ML G PD + Y TLLN LC+ + +A KL+ MK+ G P
Sbjct: 337 GQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP 396
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + Y T++ G+C+EG A ++ + M G + + V++ L+ G C G A++ +
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G P + +I G+C G V +L+E+ G P T+ +++ +C
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+M+ +L ++ + + D
Sbjct: 517 GQMKNANMLLEAMLNLGVTPD 537
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 164/380 (43%), Gaps = 18/380 (4%)
Query: 83 DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS----------- 131
++ S P FRH++ +Y + L + F I+ L S + +
Sbjct: 89 NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 132 ------LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+F L+ Y +S A++ FR + N + +L+ ++ + N
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI-NSNSPVTI 207
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + ++G P + YNI++ FC G I A +FN++ +RG+ P S+ L+ G
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ L + M PD +Y+ L++ LC++ +L A +L M+ +G P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ + ++ G R R A M + G P+LV Y TL+ GLC G + A+K +
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P LI G+C G ++ A + + + + G + ++ C
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+ L E+V+ +K D
Sbjct: 448 RVRDAERTLREMVEAGMKPD 467
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI L + + + + ++ FT LI S D A+ T+ M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354
Query: 157 LEFNCKPLPKQLNRILELL-------------------------VTHRNY---------L 182
L KP N +L L +T+ L
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A ++ K ++ GV+ + ++ ++ FC +G + A +M E G+ PD +Y ++
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+K V LL++M G P ++Y L+N LC++ +++ A LL M G
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
PD + YN ++ G C+ G+A D K+ + G + + Y +LV
Sbjct: 535 TPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + A +T R M+E KP +++ N ++ F L K
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGN-VKMGFKLLKEM 494
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G P +YN++M C G + A L M GV PD +Y IL++G C+
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG-- 552
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+A DLL+ KG + D YT+L++ + K R+
Sbjct: 553 -KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQ 588
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 164/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F++ T++ +I LGRA + IL+ + + +F LI
Sbjct: 125 ALQFFRWVERAGLFKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLI 184
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ Y ++ + A+K F M E GV
Sbjct: 185 ESYGKAGIVQEAVKIFNKMNEL------------------------------------GV 208
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+ KSY+ + + G +A +FNKM G+ P +Y I++ G ++ A+
Sbjct: 209 ERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETAMR 268
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+DM N+G PD ++Y T++N R KK+ EA KL MK K P ++ Y T++ G+
Sbjct: 269 FYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYV 328
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH-F 376
R D ++LE+M S PN+ +Y TL+ GLCD AK + M+++ +P
Sbjct: 329 AVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDN 388
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ L+ C G + A VL +++ + +++ C EE ++ + L++
Sbjct: 389 SIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDK 448
Query: 437 IVKVEI 442
+++ EI
Sbjct: 449 LIEKEI 454
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K GV + + +++ ++ G + A +FNKM E GV ++SY L + + R+ +
Sbjct: 170 KKGVEWDEYMFVVLIESYGKAGIVQEAVKIFNKMNELGVERSIKSYDALFKVILRRGRYM 229
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A + MLN G P +Y +L +L A + MK +G +PD+V YNT++
Sbjct: 230 MAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMI 289
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GF R + +A K+ +M P ++SY T++ G D + ++ M S
Sbjct: 290 NGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIK 349
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT-WVMIVPQICAGEEMEKLGE 432
P+ L+ G C+ K+ EA +L E++ AP +++ ++ ++ C ++ +
Sbjct: 350 PNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGDLRAAED 409
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VLN ++++ I T G+ +E++
Sbjct: 410 VLNTMMRLHIP--TEAGHYGVLIENF 433
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 146/353 (41%), Gaps = 44/353 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + + + +K ++ T +T +IK Y + D L+ M
Sbjct: 284 TYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEM 343
Query: 157 LEFNCKP-----------------LPKQLNRILELLVTH------------------RNY 181
FN KP + + + ++E++ H
Sbjct: 344 KSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGD 403
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP------D 235
LR A D+ + + + Y +++ FC + A +K+ E+ ++ +
Sbjct: 404 LRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDKLIEKEIILRPQSTLE 463
Query: 236 VES--YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+ES Y ++Q LC Q +A ++ KG V D L++ L+ ++ A+++
Sbjct: 464 IESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKG-VQDPLAFNNLICGHAKEGYPDSAFEI 522
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
M +G D Y ++ + R+G DA L+ M +G +P+ +R+++ L +
Sbjct: 523 FKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRSVMESLFE 582
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G A + M+ M+ KG + + +++ G V+EA G +E L+++G
Sbjct: 583 DGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLMQSG 635
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 148/360 (41%), Gaps = 45/360 (12%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
NS +L L+ +A +D+L T+ H P + LI+ + ++ DRA+K
Sbjct: 387 DNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYL 446
Query: 154 RSMLEFNCKPLPKQ--------LNRILELLVTH--------------------------- 178
++E P+ N +++ L +H
Sbjct: 447 DKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKGVQDPLAFNNL 506
Query: 179 ------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
Y AF++FK K GV + +Y +++ ++ G+ + A T + M E G
Sbjct: 507 ICGHAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGH 566
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
+PD +R +M+ L +V A +++ M+ KG + +L +L + + EA
Sbjct: 567 VPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEA-- 624
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L R+++ + V+++ ++ +G+ I A K+L+ + SY ++ L
Sbjct: 625 -LGRIELLMQSGFHVNFDDLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALL 683
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A + ++ KG +S S LIK G +A +L ++K GE HE+
Sbjct: 684 AAGKTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGNTKQA-DILSRMIKGGEKSHEN 742
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D +++ +++ L R S++N A +L DM KG D + L+ S + ++EA K+
Sbjct: 141 DRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKAGIVQEAVKIF 200
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+M G I Y+ + R GR + A +V M ++G P +Y ++ G
Sbjct: 201 NKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLS 260
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ A ++ M ++G SP + +I GF K++EA + E+ AP ++
Sbjct: 261 LRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISY 320
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
++ A + ++ +L E+ IK
Sbjct: 321 TTMIKGYVAVDRVDDGLRLLEEMKSFNIK 349
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 143/283 (50%), Gaps = 4/283 (1%)
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRIL-ELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
ES D A + + M E P N +L L R ++ FDL++ + G N
Sbjct: 2 ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGR--IKDCFDLWELMGRKGS-QN 58
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
S+NIMMR NG++ A +++ M + G + D +Y I++ G C+ +N+++ +LE
Sbjct: 59 VVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLE 118
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
KG V D +Y+ ++N LC++ KL +A +L M GC P+ YNT++ GF
Sbjct: 119 IAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGAS 178
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ DA +V +M S C P +V+Y TL+ GLC F A ++ M+ KG+ P
Sbjct: 179 KFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYS 238
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
L+KG C KV+ A + ++L G P +++ +C+
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCS 281
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ YN M+ F G I + L+ M +G +V S+ I+M+GL +V++A+
Sbjct: 21 VSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGS-QNVVSFNIMMRGLFDNGEVDKAI 79
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ E M GFV D+++Y +++ C+ + ++ +L + KG D Y+ ++ G
Sbjct: 80 SIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGL 139
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+E + A VL M +GC PN Y TL+ G FD A + + M S SP
Sbjct: 140 CKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTI 199
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
H LI G C + EA +++E+L+ G P T+ +++ +C G ++E ++ N+
Sbjct: 200 VTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQ 259
Query: 437 IVKVEIKGDTRI 448
++ K D ++
Sbjct: 260 VLSKGFKPDVQM 271
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 1/288 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
++ F + TY I+I + Y + +L + + + ++ +I +
Sbjct: 86 KKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKL 145
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+A+ M++ CKP N ++ V + A +F+ P +Y+
Sbjct: 146 DKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKF-DDAIRVFREMGSMDCSPTIVTYHT 204
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ C S AY L +M E+G P V +Y +LM+GLC+ +V A+ L +L+KG
Sbjct: 205 LINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKG 264
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F PD + L++ LC K + A L M C P++V +NT++ GF ++G +A
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNAL 324
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+ + +G P+++SY + GLC A ++ ++K P
Sbjct: 325 VIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFP 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + K G PN YN ++ F A +F +M P + +Y
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHT 204
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + + A DL+++ML KG+ P ++Y+ L+ LC+ K+ A +L ++ KG
Sbjct: 205 LINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKG 264
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ +N ++ G C G+ A + DM C PNLV++ TL+ G G A
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNAL 324
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
++ G P + +KG C+ ++ A L + L
Sbjct: 325 VIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDAL 366
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ LI + ++ D A++ FR M +C P + ++ L + A+DL K
Sbjct: 166 VYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERF-SEAYDLVKE 224
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G P +Y+++M+ C + +A L+N++ +G PDV+ + IL+ GLC +
Sbjct: 225 MLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGK 284
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A+ L DM + P+ +++ TL+ + +R A + R+ G PDI+ YN
Sbjct: 285 TQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNI 344
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ G C R A L D + P +++
Sbjct: 345 TLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 114/243 (46%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y+ + + + A G + + +Y+ M+ C + A ++ N M + G P+ Y
Sbjct: 109 YINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYN 168
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ G S+ + A+ + +M + P ++Y TL+N LC+ ++ EAY L+ M K
Sbjct: 169 TLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEK 228
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P ++ Y+ ++ G C+ + A ++ + S G P++ + L+ GLC G A
Sbjct: 229 GWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHA 288
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
M +P+ + L++GF G + A + +L++G P ++ + +
Sbjct: 289 LMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKG 348
Query: 421 ICA 423
+C+
Sbjct: 349 LCS 351
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 153/299 (51%), Gaps = 5/299 (1%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLR 183
+ P++FT+ + I A ++ ++A M + C P N +++ + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + K ++ V PN ++NI++ F + ++ + +F +M ++ V P+V SY L+
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC +++ A+ + + M++ G P+ ++Y L+N C+ L+EA + +K +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P YN ++ +C+ G+ D + E+M G +P++ +Y L+ GLC G + AKK
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ SKG P H L++G+C G+ +A +L+E+ K G P T+ +++ C
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%), Gaps = 7/298 (2%)
Query: 128 VTPSLFTYLIKI---YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
V+P+L T+ I I + + NLP ++K F+ ML+ + KP N ++ L + +
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPG-SMKVFKEMLDQDVKPNVISYNSLINGLC-NGGKISE 349
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + GV PN +YN ++ FC N + A +F + +G +P Y +L+
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C+ +++ L E+M +G VPD +Y L+ LCR + A KL ++ KG P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY- 363
D+V ++ ++ G+CR+G + A +L++M G P ++Y ++ G C +G A
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Q+ + + + + L++G+ GK+++A +L E+L+ G P+ T+ ++ ++
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 154/322 (47%), Gaps = 13/322 (4%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN T+ ++I L + + D++ +K Y +P++ +Y LI Y +
Sbjct: 220 QPNV----FTFNVVINALCKTGKMNKARDVMEDMKV--YGCSPNVVSYNTLIDGYCKLGG 273
Query: 146 PDRALKT---FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ K + M+E + P N +++ N L + +FK V PN
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN-LPGSMKVFKEMLDQDVKPNVI 332
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SYN ++ C G IS A ++ +KM GV P++ +Y L+ G C+ + A+D+ +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+G VP T Y L+++ C+ K+ + + L M+ +G PD+ YN ++ G CR G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN- 451
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
I+A K L D ++ LP+LV++ L+ G C +G A ++ M G P + +
Sbjct: 452 IEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 383 IKGFCNVGKVDEACGVLEELLK 404
+KG+C G + A + ++ K
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEK 533
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 200/467 (42%), Gaps = 50/467 (10%)
Query: 31 FCYSSSS-QESPSSP-----------EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLA 78
C SSS+ SP P E+Q S + + I ++LI+S+ DP L
Sbjct: 25 LCSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLC 84
Query: 79 KEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL---ITLKSEHYP-------- 127
+ + + + S L+ L AK +S I L + S+H
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144
Query: 128 ------VTPSLFTYLIKIYAESNLPDRALKTFR-------SMLEFNCKPLPKQLNRILEL 174
V + L+ YA ++ + + F+ + +CKPL ++ L
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL------MIAL 198
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L +R+ ++K + + PN ++N+++ A C G ++ A + M G P
Sbjct: 199 LKENRS--ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 235 DVESYRILMQGLCR---KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+V SY L+ G C+ ++ +A +L++M+ P+ ++ L++ + L +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
K+ M + P+++ YN+++ G C G+ +A + + M S G PNL++Y L+ G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C M A + +G P + + LI +C +GK+D+ + EE+ + G P
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
T+ ++ +C +E ++ +++ KG +V I +E Y
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTS---KGLPDLVTFHILMEGY 480
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 122/231 (52%), Gaps = 5/231 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+L TY LI + ++++ AL F S+ P + N +++ +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC-KLGKIDDG 420
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L + + G++P+ +YN ++ C NG+I A LF+++ +G +PD+ ++ ILM+G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEG 479
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNP 304
CRK + +A LL++M G P L+Y ++ C++ L+ A + +M K +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++ YN ++ G+ ++G+ DA +L +M G +PN ++Y + + DQG
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRI 241
R A L K K G+ P +YNI+M+ +C G++ A + +M ER + +V SY +
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 242 LMQGLCRKSQVNRAVDLL-------------------EDMLNKGFVPD 270
L+QG +K ++ A LL E+M+++GFVPD
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P T S L ++ D A K M C P N ++ L R + PA
Sbjct: 49 PNTVSYNIVLKGLFTAERWED-AEKLMEEMAHKGCPPNVVTFNMLISFLC-RRGLVEPAM 106
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ + K+G PN+ SYN ++ AFC + A M RG PD+ SY L+ L
Sbjct: 107 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTAL 166
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR +V+ A+DLL + KG P +SY T+++ L + K +EA +LL M KG PDI
Sbjct: 167 CRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDI 226
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ Y T+ G CRE + +A + + G P +V Y ++ GLC + A
Sbjct: 227 ITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSY 286
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
MIS G P+ S L++G G V EA +L +L G
Sbjct: 287 MISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRG 326
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 153/292 (52%), Gaps = 3/292 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P + TY ++ + D A++ ++ + +P N +L+ L T +
Sbjct: 13 APDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEK 72
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + AHK G PN ++N+++ C G + A + ++ + G P+ SY L+
Sbjct: 73 LMEEMAHK-GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ ++++A+ +E M+++G PD +SY TLL +LCR ++ A LL ++K KGC+P +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ +A ++L++M S G P++++Y T+ GLC + + A +
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G P + +A++ G C + A + ++ G P+E T+ ++V
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILV 303
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 133/238 (55%), Gaps = 3/238 (1%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
L ++M ++G PD+ +Y +++ G+C++ +V+ A++ LE++ + G P+T+SY +L L
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
++ +A KL+ M KGC P++V +N ++ CR G A +VLE +P GC PN +
Sbjct: 63 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
SY L+ C Q D A +++LM+S+G P + L+ C G+VD A +L +L
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGLED 457
G +P ++ ++ + + ++ E+L+E++ ++ D + +G+ ED
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 3/257 (1%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G P+ +YN+++ C G + A + G P+ SY I+++GL
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ A L+E+M +KG P+ +++ L++ LCR+ + A ++L ++ GC P+ +
Sbjct: 63 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ FC++ + A +E M S GC P++VSY TL+ LC G DVA + +
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
KG SP + +I G GK EA +L+E++ G P T+ I +C +++
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242
Query: 428 EKLGEVLNEIVKVEIKG 444
E E + KV+ G
Sbjct: 243 E---EAIRTFCKVQDMG 256
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%)
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
KLL M+ KGC PDI+ YN V+ G C+EGR DA + LE++PS G PN VSY ++ GL
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
++ A+K M+ M KG P+ + LI C G V+ A VLE++ K G P+
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 412 DTWVMIVPQICAGEEMEK 429
++ ++ C ++M+K
Sbjct: 122 LSYNPLLHAFCKQKKMDK 139
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K+L++M GC P++++Y ++ G+C +G D A ++++ + S G P+ + ++KG
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++A ++EE+ G P+ T+ M++ +C +E EVL +I K
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK 114
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
+Y L+ L R + D+L LK + +P L +Y +I ++ AL+
Sbjct: 158 SYNTLLTALCRNGEVDVAIDLLHQLKGKG--CSPVLISYNTVIDGLTKAGKTKEALELLD 215
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ +P I L + + A F G+ P YN ++ C
Sbjct: 216 EMISKGLQPDIITYTTIASGLC-REDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKR 274
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ A LF+ M G MP+ +Y IL++GL + V A DLL + ++G V
Sbjct: 275 RETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 161/329 (48%), Gaps = 20/329 (6%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+TP ++TY L+ + + L ++A F M + C P ++ + R L A
Sbjct: 153 ITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRK-LSRA 211
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV-MPDVE------- 237
++F+ +G +PN +Y ++ C G+ A ++ +M V +PDV+
Sbjct: 212 NEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVD 271
Query: 238 ---------SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+Y L+ GLC+ +V A DLLE M +G P+ + Y L++ C+ KL
Sbjct: 272 SELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLD 331
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA ++ +M GC+P++ Y++++ ++ R A KVL M N C PN+V Y +V
Sbjct: 332 EAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMV 391
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
GLC G D A + M +M KG P+ A+I GF G+VD +L+ + G A
Sbjct: 392 DGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCA 451
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
P+ T+ +++ CA ++ ++L E+
Sbjct: 452 PNFITYRVLINHCCAAGLLDDAHKLLEEM 480
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 131/256 (51%), Gaps = 2/256 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A DL ++ G PN Y+ ++ FC G + A +F KM G P+V +Y
Sbjct: 295 VKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSS 354
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ L + +++ A+ +L ML P+ + YT +++ LC+ K EAY+L+ M+ KG
Sbjct: 355 LIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKG 414
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P++V Y ++ GF + GR ++L+ M S GC PN ++YR L+ C G+ D A
Sbjct: 415 CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAH 474
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K ++ M + H + +I+GF + + + G+L EL + G P + +++
Sbjct: 475 KLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNF 532
Query: 422 CAGEEMEKLGEVLNEI 437
+E E+ E+
Sbjct: 533 IKAGRLEMALELHEEL 548
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 17/272 (6%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+++ + G +P++ +Y+ ++ C + A+ LF +M G+ PDV +Y L+
Sbjct: 106 AYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLD 165
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C+ + +A + ++M G P+ ++YT L+++ + +KL A ++ M GC P
Sbjct: 166 RFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVP 225
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC-----------------LPNLVSYRTL 347
+IV Y ++ G C+ G AC++ M ++ PN+V+Y L
Sbjct: 226 NIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGAL 285
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
V GLC A+ ++ M +G P+ + ALI GFC VGK+DEA V ++L G
Sbjct: 286 VDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGC 345
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+P+ T+ ++ ++ + ++ +VL ++++
Sbjct: 346 SPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+ C P P N ++ +Y A+ L K G P YNI++ C
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFY-AYKLLKKMVICGYQPGYVVYNILIGGICSTE 60
Query: 216 D------ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
D I +A +N+M E GV+ + + + LC + +A +++ +M++KGF+P
Sbjct: 61 DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D+ +Y+ ++ LC K+ +A++L MK G PD+ Y T++ FC+ G A
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
++M +GC PN+V+Y L+ A + ++M+S G P+ ALI G C
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240
Query: 390 GKVDEACGV 398
G+ ++AC +
Sbjct: 241 GETEKACQI 249
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 41/349 (11%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
I D ++PN TY L+ L +A D+L T+ E ++ LI +
Sbjct: 269 IVDSELKEPNV----VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGF 324
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ D A + F ML C P + +++ L + L A + ++ PN
Sbjct: 325 CKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR-LDLALKVLTKMLENSCAPN 383
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
Y M+ C G AY L M E+G P+V +Y ++ G + +V+R ++LL+
Sbjct: 384 VVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ 443
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M +KG P+ ++Y L+N C L +A+KLL MK I Y V+ GF E
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEF 503
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA---------------KKYMQ 365
A + +L ++ +G +P L Y+ L+ G ++A Y+
Sbjct: 504 VA--SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVS 561
Query: 366 L-------------------MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
L M +GF P S+ LIKG VGK +EA
Sbjct: 562 LIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I G+A ++L + S+ P+ TY LI + L D A K
Sbjct: 421 TYTAMIDGFGKAGRVDRCLELLQLMTSK--GCAPNFITYRVLINHCCAAGLLDDAHKLLE 478
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + PK + +++ + + L + G +P Y +++ F
Sbjct: 479 EMKQ---TYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKA 535
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + +A L ++ +Y L++ L +V++A L DM +GFVP+
Sbjct: 536 GRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSML 594
Query: 275 TTLLNSLCRKKKLREAYKL---LCRMKV 299
L+ L R K EA +L +C+M +
Sbjct: 595 VCLIKGLLRVGKWEEALQLSDSICQMDI 622
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 160/328 (48%), Gaps = 19/328 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP ++TY LI + ++ L ++A F M C P ++ + + + A
Sbjct: 319 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-VPQA 377
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF----------------E 229
D+F G PN +Y ++ C G+IS A+ ++ K+
Sbjct: 378 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+ P+V +Y L+ GLC+ +V+ A +LL+ ML+ G P+ + Y L++ C+ K+
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 497
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +M G P + Y +++ ++GR A KVL M + C PN+V+Y ++
Sbjct: 498 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC G + A K + LM KG SP+ ALI G GK+D + + ++ + G +P
Sbjct: 558 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ T+ +++ +CA ++K +L E+
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 17/312 (5%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
+L D A K + ML NC + L + + AF L K + G +P+T +
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK-AFQLIKEMMRKGFVPDTST 290
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y+ ++ C + A+ LF +M GV PDV +Y IL+ C+ + +A L E+M
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ G P ++YT L+++ + K++ +A + RM GC P+ V Y +V G C+ G
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410
Query: 324 DACKVLEDMPSNG----------------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
A +V + PN+V+Y LV GLC D A + + M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ V ALI GFC GK+D A V ++ K G P T+ ++ ++ +
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530
Query: 428 EKLGEVLNEIVK 439
+ +VL++++K
Sbjct: 531 DLAMKVLSQMLK 542
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 17/322 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI +A + ++S T +T LI Y ++ +A F M
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDL----------------FKSAHKHGVLPN 200
++ C+P +++ L N + AF++ F +H + PN
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGN-ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+Y ++ C + A+ L + M G P+ Y L+ G C+ +++ A ++
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G++P +YT+L++ + + +L A K+L +M C P++V Y ++ G CR G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ A K+L M GC PN+V+Y L+ GL G D++ M KG SP++
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 381 ALIKGFCNVGKVDEACGVLEEL 402
LI C G +D+A +L E+
Sbjct: 624 VLINHLCAAGLLDKARLLLGEM 645
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + G PN Y+ ++ FC G I A +F +M + G +P V +Y L+
Sbjct: 463 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ + +++ A+ +L ML P+ ++YT +++ LCR + +A KLL M+ KGC+P
Sbjct: 523 RMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 582
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V Y ++ G + G+ + + M GC PN V+YR L+ LC G+ D A+ +
Sbjct: 583 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M + + I+GF + G+LEE+ G P + M++
Sbjct: 643 GEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 700
Query: 425 EEMEKLGEVLNEIVKV 440
+E E+ E+++V
Sbjct: 701 GRLEIAMELHKEMMEV 716
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 152/380 (40%), Gaps = 58/380 (15%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D L ++ E + + L T++I E++ D A+ M +C P +L
Sbjct: 93 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + L + G PN +N ++ ++C D + AY L N+M G P
Sbjct: 153 LKKKQ-LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 236 VESYRILMQGLCRKSQV-----------------------------------------NR 254
Y I + +C + ++ ++
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A L+++M+ KGFVPDT +Y+ ++ LC K+ +A+ L MK+ G PD+ Y ++
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
FC+ G A + E+M S GC P +V+Y L+ A M+ G P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGE----------------APHEDTWVMIV 418
+ AL+ G C G + +A V +L+ + AP+ T+ +V
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+C +++ E+L+ ++
Sbjct: 452 DGLCKAHKVDHAHELLDAML 471
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 46/293 (15%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +YN +++ G + + + + +M E G D + LC++ + A
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+D++E + F DT+ T +++ L EA L RM+ C P++V Y T++ G
Sbjct: 95 LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 316 F-----------------------------------CREGRAIDACKVLEDMPSNGCLPN 340
F C E A K+L M + GC P
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 341 LVSYRTLVGGLCDQ------GMFDVAKK-YMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
V Y +G +C Q + D+A+K Y +++ + +V++ + C VGK D
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN-FARCLCGVGKFD 270
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A +++E+++ G P T+ ++ +C ++EK + E+ V + D
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 40/336 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A ++L + S ++ LI + ++ D A + F M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +++ + L A + K PN +Y M+ C G+
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKD-GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L + M E+G P+V +Y L+ GL + +++ ++DL M KG P+ ++Y
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N LC L +A LL MK + Y + GF + I + +LE+M S G
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYG 682
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVA----KKYMQL-------------------------- 366
+P Y L+ G ++A K+ M++
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 742
Query: 367 -------MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M +GF P SV LIKG V K DEA
Sbjct: 743 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI LG+A L D+ + + +P+ TY LI + L D+A R
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRK--GCSPNYVTYRVLINHLCAAGLLDKA----R 639
Query: 155 SML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+L E PK L + + + + +G +P Y +++ F
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 699
Query: 214 NGDISIAYTLFNKMFE--RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
G + IA L +M E V D + Y L+Q LC SQV A L +M +GFVP+
Sbjct: 700 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 759
Query: 272 LSYTTLLNSLCRKKKLREAYKL 293
+ L+ L KK EA +L
Sbjct: 760 SVFVCLIKGLVEVKKWDEALQL 781
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 32/212 (15%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R++ + A D + + + G+ P ++Y L+ L ++ +++ M G D
Sbjct: 17 RRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 76
Query: 308 HYNTVVLGFCREGRAIDACKVLE--------------------------------DMPSN 335
C+EGR DA ++E M N
Sbjct: 77 TVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 136
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C+PN+V+YRTL+ G + K+ + +M+++G +P+ S+ ++L+ +CN A
Sbjct: 137 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 196
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+L + G P + + + IC E++
Sbjct: 197 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 228
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 173/394 (43%), Gaps = 39/394 (9%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK 109
++ N S SP +++++ S+ +LA +F +A Q F+H+ S Y LI LG+ K
Sbjct: 83 TLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIK 142
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
F LI ++ +K++ ++ F + + YA + A+ F M EF K N
Sbjct: 143 QFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN 201
Query: 170 RILELLVTHRNY--LRPAFDLFKSAH--------------------------------KH 195
R+L+ L RN + FD K
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +Y I++ A C A FN+M +R P + L+ GL + ++N A
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++ E + GF + +Y L+ + C +++ +AYK + M++KG P+ Y+ ++
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
R R+ +A +V + M C P + +Y +V C++ D+A K M KG P
Sbjct: 382 LIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ +LI C+ K+DEAC E+L G P
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
Q N + S + LI LG K + + KS +P+ + L+ Y S +
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 354
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A KT M P + + IL L+ + + A++++++ P +Y IM
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS-KEAYEVYQTM---SCEPTVSTYEIM 410
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R FC + +A ++++M +GV+P + + L+ LC +++++ A + +ML+ G
Sbjct: 411 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
P ++ L +L + + + L+ +M
Sbjct: 471 RPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L + G+ PN +YN ++ C G ++ A + +M G+ PD Y L+ G C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ V+ A L ++M + PD ++YT ++ LC+ ++ EA KL M K PD V
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y ++ G+C+EG+ +A + M G PN+V+Y L GLC G D A + + M
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
KG + ++L+ G C G +D+A +++++ AG P T+ ++ C EM
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449
Query: 428 EKLGEVLNEIVKVEIK 443
+ E+L +++ E++
Sbjct: 450 VRAHELLRQMLDRELQ 465
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
+ LK M KP P N ++ LL+ + A + + G+ P+ Y
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVI-LLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 263
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC G++S AY LF++M +R + PD +Y ++ GLC+ +V A L +M+ K
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
PD ++YT L++ C++ K++EA+ L +M G P+IV Y + G C+ G A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
++L +M G N+ +Y +LV GLC G D A K M+ M GF P L+ +
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG---EEMEKL 430
C ++ A +L ++L P T+ +++ C E+ EKL
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 123/231 (53%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +Y ++ +C G + A++L N+M + G+ P++ +Y L GLC+ +V+ A +L
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +M KG + +Y +L+N LC+ + +A KL+ M+V G +PD V Y T++ +C+
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ A ++L M P +V++ L+ G C GM + +K ++ M+ KG P+ +
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
++LIK +C + + + G P +T+ +++ C M++
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 121/225 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ AF L + G+ PN +Y + C G++ A L ++M +G+ ++ +Y
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ +++AV L++DM GF PD ++YTTL+++ C+ +++ A++LL +M +
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P +V +N ++ GFC G D K+L+ M G +PN +Y +L+ C +
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ + M +KG P + + LIKG C + EA + +++ G
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 124/249 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ LF K + P+ +Y ++ C G + A LF++M + + PD +Y L+
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C++ ++ A L ML G P+ ++YT L + LC+ ++ A +LL M KG
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+I YN++V G C+ G A K+++DM G P+ V+Y TL+ C A + +
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ + P + L+ GFC G +++ +L+ +L+ G P+ T+ ++ Q C
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516
Query: 425 EEMEKLGEV 433
M E+
Sbjct: 517 NNMRATTEI 525
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 7/230 (3%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRIL-------MQGLCRKSQVNRAVDLLEDMLNKGFVP 269
+S A LF+KM G++ V+S + + G+ + + L+E+M KG P
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ +Y ++ LC+ K+ EA ++L M +G PD V Y T++ GFC+ G A ++
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
++M P+ ++Y ++ GLC G A K M+ K P ALI G+C
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
GK+ EA + ++L+ G P+ T+ + +C E++ E+L+E+ +
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 131 SLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
+++TY L+ ++ D+A+K + M P +++ R +R A +L
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR-AHEL 455
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ + P ++N++M FC +G + L M E+G+MP+ +Y L++ C
Sbjct: 456 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 515
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
++ + ++ M KG VPD +Y L+ C+ + ++EA+ L M KG N +
Sbjct: 516 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 575
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
YN ++ GF + + ++A ++ E M G + + Y D+G ++
Sbjct: 576 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELT 627
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L K G P+ +Y +M A+C + ++ A+ L +M +R + P V ++ +LM
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + LL+ ML KG +P+ +Y +L+ C + +R ++ M KG P
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D YN ++ G C+ +A + DM G + SY L+ G + F A++
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596
Query: 365 QLMISKGF 372
+ M +G
Sbjct: 597 EQMRREGL 604
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKS-YNIMMRAF---CFNGDISIAYTLFNKMFERGVMP 234
R L+P F++ H VL N K+ Y +++ F C D S+
Sbjct: 82 RRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIATAS-K 140
Query: 235 DVESYRILMQGLCRKSQVNRAVD----LLEDMLNKGFVPDTLSYTTLLNSLCR-----KK 285
D++ R L+Q ++ V L + MLN G + S ++ L K
Sbjct: 141 DLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKI 200
Query: 286 KLREAY--KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
L+ + KL+ M++KG P+ YN V+L C+ G+ +A +VL +M S G P+ V
Sbjct: 201 ALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ G C G A + M + SP F A+I G C G+V EA + E++
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
P E T+ ++ C +M++ + N+++++
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 357
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 185/432 (42%), Gaps = 33/432 (7%)
Query: 22 FPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEI 81
PP P L +S S + P P Q Q S ++ +AK +
Sbjct: 29 LPPCHPLLCLLHSYSPNDRP--PPQHQPSH--------------------DAELWIAKAL 66
Query: 82 FDYASRQPN----FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTY 135
A +P+ FR + + L A S + L S + PS + Y
Sbjct: 67 ASAAFLRPHHLLAFRRLAPSPVAAAAALRHAPCASSTLQLFSALHSSQLAIPPSAHSYRY 126
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
+I + +S+ ALK F M + + + L + +L A L A +
Sbjct: 127 VISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAALLSKAPQF 186
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-PDVESYRILMQGLCRKSQVNR 254
G +YN +M +F G + A LF + G PDV S+ + ++G+C+ V +
Sbjct: 187 GCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQK 246
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVV 313
A++L+E M G PDT++ L+ LCR K++ ++L R++ G C P++V Y +V+
Sbjct: 247 ALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVI 306
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+C+ GR DA V DM G PN V+Y L+ G G A Q MI +
Sbjct: 307 SGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCP 366
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P LI G+C G++D+A E+ + P+ T+ +I+ C + + E
Sbjct: 367 PDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFC---KQNRSAEA 423
Query: 434 LNEIVKVEIKGD 445
L + ++ ++ D
Sbjct: 424 LRFLKELNMRTD 435
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 129/305 (42%), Gaps = 40/305 (13%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P ++++ + I + D +AL+ M EF C P N ++ L + R
Sbjct: 225 SPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSR-GR 283
Query: 187 DLFKSAHKHGV-LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ + + GV +PN +Y ++ +C +G + A ++N M G P+ +Y +L+ G
Sbjct: 284 EVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLING 343
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + AV + + M+ + PD ++++TL++ CR +L +A + M P+
Sbjct: 344 YGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPN 403
Query: 306 IVHYNTVVLGFCREGRAIDA---------------------------CK---------VL 329
++ ++L FC++ R+ +A CK +L
Sbjct: 404 AHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLIL 463
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+M GC P+ +Y L+ G C +G A + M+ G SP ++ I
Sbjct: 464 MEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKA 523
Query: 390 GKVDE 394
G E
Sbjct: 524 GMPSE 528
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 123/270 (45%), Gaps = 5/270 (1%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSML 157
IL+ L R K S ++L L+ + P++ TY +I Y +S + A+ + M+
Sbjct: 268 ILVGGLCRVKEVSRGREVLRRLQRDGV-CMPNVVTYTSVISGYCKSGRMEDAMAVYNDMI 326
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
P N ++ N + A +++ P+ +++ ++ +C G +
Sbjct: 327 GCGTTPNAVTYNVLINGYGKAGN-MGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQL 385
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM-LNKGFVPDTLSYTT 276
A + +M + + P+ ++ I++ C++++ A+ L+++ + P
Sbjct: 386 DDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNP 445
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++ LC+ K+ EA +L M+ KGC PD Y +++G C +GR +A M G
Sbjct: 446 VIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTG 505
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
C P+ ++ + +G L GM + M++
Sbjct: 506 CSPDSITVNSFIGCLLKAGMPSEVDRIMKI 535
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
++S+ Y +T +I Y + + +RA M E P +++ N
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
++R A++L K G PN +YN ++ C G + AY L NK+ G+ D +Y
Sbjct: 416 FVR-AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYT 474
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
ILM CR++ NR++ ML GF PD SYTTL++ CR+K+++E+ +L
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSL 534
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P Y +++ G+CR G A K+ + M ++GC P+ ++Y L+ GLC + D A
Sbjct: 535 GLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
+ M+ KG SP L +C A VL+ L K
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 138/253 (54%), Gaps = 1/253 (0%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G + + + +++ AFC G ++ F KM E G+ P+V ++ L+ GLC++ +
Sbjct: 252 ERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIK 311
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTV 312
+A +LLE+M+ +G+ P+ ++TTL++ LC+K +A++L ++ + G P++ Y +
Sbjct: 312 QAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAM 371
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C+E + A +L M G +PN +Y TL+ G C G F A + M LM +GF
Sbjct: 372 INGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF 431
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
SP+ +A+I G C G +DEA +L ++ G T+ +++ C + +
Sbjct: 432 SPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLV 491
Query: 433 VLNEIVKVEIKGD 445
N+++KV D
Sbjct: 492 FFNKMLKVGFTPD 504
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 37/343 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF-KS 191
FT LI + +A + M+ KP +++ L + + AF LF K
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC-KKGWTEKAFRLFLKL 355
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
G PN +Y M+ +C ++ A L ++M E+G++P+ +Y L+ G C+
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC--------- 302
RA +L++ M +GF P+ +Y +++ LC+K L EAY+LL ++ V G
Sbjct: 416 FVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475
Query: 303 --------------------------NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
PDI Y T++ FCR+ + ++ ++ E+ S G
Sbjct: 476 LMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLG 535
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+P +Y +++ G C G +A K Q M + G +P ALI G C K+D+A
Sbjct: 536 LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDAR 595
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ + ++ G +P E T + + + C ++ VL+ + K
Sbjct: 596 NLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 139/261 (53%), Gaps = 4/261 (1%)
Query: 166 KQLNRILELLVTH---RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
++ N +++ +V + L+ A ++ G++ +T++ N ++ G + IA
Sbjct: 151 ERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAEN 210
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F +M +RGV PD S+++++ C +V A L M+ +GF+ D + T ++++ C
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFC 270
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
+K + +M G P+++++ ++ G C++G A ++LE+M G PN+
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330
Query: 343 SYRTLVGGLCDQGMFDVA-KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
++ TL+ GLC +G + A + +++L+ S G+ P+ A+I G+C K++ A +L
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ + G P+ +T+ ++ C
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHC 411
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+ Y+ F + G+ PN ++ ++ C G I A+ L +M RG P+V
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
++ L+ GLC+K +A L ++ + G+ P+ +YT ++N C++ KL A LL R
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M+ +G P+ Y T++ G C+ G + A ++++ M G PN+ +Y ++ GLC +G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
D A + + + G L+ C + + ++LK G P ++
Sbjct: 451 LDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTT 510
Query: 417 IVPQICAGEEMEKLGEVLNEIVKV 440
++ C ++M++ + E V +
Sbjct: 511 LISXFCRQKQMKESERLFEEAVSL 534
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+S + NK ER E + ++ ++ AV+++ +M N+G V T +
Sbjct: 139 VSATALIGNKNLERAN----EVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNC 194
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L+ + A + M +G +PD V + +V+ C GR ++A K L M G
Sbjct: 195 VLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERG 254
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
+ + + ++ C +G + Y M+ G +P+ ALI G C G + +A
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+LEE+++ G P+ T ++ +C EK + ++V+
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ HG P++ +Y ++ C + A L++ M ++G+ P + L
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
C+K + A+++L+ + + ++ + TL+ LC + KL A
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMA 661
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 152/286 (53%), Gaps = 1/286 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI +S +RA+ F M+E +P +++ + +L+ AF L
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQC-NEGHLQCAFRLLHLM 308
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G++PN ++++++ A C + A + ++GV + Y L+ GLC+ ++
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +L++ M+++GFVPD SY++L++ LCR+KKL +A +L M KG V Y +
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ RE + K+ + M + G P++V+Y V C++G + A+ + M+ +G
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P+ + LI+G+ N+G V +A E ++ G P+ED++ +++
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
+G PN YN ++ +C G++ A +F M P+V +Y L+ GLC+ +V R
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+ L M+ G P+ ++YT L+ C + L+ A++LL M+ G P+ ++ ++
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C+ + +A L + G N V Y +L+ GLC G D A + MQ MIS+GF P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+LI G C K+ +A +LE++++ G T+ +I+ ++ E ++
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445
Query: 435 NEIVKVEIKGD 445
++++ I D
Sbjct: 446 DKMIATGINPD 456
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 132/318 (41%), Gaps = 42/318 (13%)
Query: 163 PLP--KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
PLP + LN +L L HR F +S N ++Y ++ A+C GDI A
Sbjct: 37 PLPPLRCLNTLLMALARHR-----MFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAA 91
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ G+ PD +Y + G CR + A + M +G + +YT LL+
Sbjct: 92 KQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG 151
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPD----------------------------------- 305
L +REA + M+ C PD
Sbjct: 152 LLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G+C G A KV E M N C PN+ +Y L+ GLC G + A
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ G P+ ALI+G CN G + A +L + G P++ T+ +++ +C E
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 426 EMEKLGEVLNEIVKVEIK 443
++E+ L +VK +K
Sbjct: 332 KVEEAQLFLGSLVKKGVK 349
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 3/322 (0%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H + P + Y + Y + + A + F M C +L L+ +
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG-AGMV 158
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A +F P+T Y M+ C G A L + G P++ Y L
Sbjct: 159 REAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++ A+ + E M P+ +YT L++ LC+ K+ A L RM G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V Y ++ G C EG A ++L M +NG +PN ++ L+ LC + + A+
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ ++ KG + V +LI G C GK+D A ++++++ G P ++ ++ +C
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 423 AGEEMEKLGEVLNEIVKVEIKG 444
+++ + +L ++++ I+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQA 420
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSML 157
Y LI L + D+++ + SE + ++ LI +A M+
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
E + P I++ LV P +F G+ P+ +Y + +R++C G +
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPK-KIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A ++ +M +RGV P++ +Y L++G V++A E M+ KG+ P+ SYT L
Sbjct: 474 EDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVL 533
Query: 278 LNSLCRK 284
L + +K
Sbjct: 534 LRLVVKK 540
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 31/274 (11%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDD 116
S I C+ K+ A+ D L+ K I + F +Y LI L R K S
Sbjct: 357 SLIDGLCKTGKIDAA--DELMQKMISE------GFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L + + +P +T +I + K F M+ P I+ V
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP------DIVTYTV 462
Query: 177 THRNY-----LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
R+Y + A + GV PN +YN ++R + G +S A++ F M +G
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVD------------LLEDMLNKGFVPDTLSYTTLLN 279
P+ +SY +L++ + +KS + +VD LLED+ + Y+ +
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
LCR +L EA M+ P Y +++
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 133/229 (58%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A + + K G+ P+ S+N ++ + GD+ + L + M GV PDV +Y +
Sbjct: 150 IRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 209
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC++S+++ A +L ++ML+KG VP+ +++TTL++ C+ ++ A ++ +M +
Sbjct: 210 LINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 269
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD++ YNT++ G C++G A ++++M G P+ ++Y TL+ G C +G + A
Sbjct: 270 LSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAF 329
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
++ + MI + V ALI G C G+ +A +L E+L G P+
Sbjct: 330 EHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPN 378
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 1/315 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + +K
Sbjct: 66 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLK-YFKLVWGFYKE 124
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M+ FC GDI +A + N + + G+ P V S+ L+ G R
Sbjct: 125 ILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGD 184
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L M G PD +Y+ L+N LC++ K+ +A +L M KG P+ V + T
Sbjct: 185 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTT 244
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ GR A ++ + M S P+L++Y TL+ GLC +G A + M +G
Sbjct: 245 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEG 304
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P LI G C G ++ A + +++ + + ++ +C
Sbjct: 305 LKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 364
Query: 432 EVLNEIVKVEIKGDT 446
++L E++ V +K +T
Sbjct: 365 KMLREMLSVGLKPNT 379
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+LR A + ++ +H + ++ + + + ++ E G + +
Sbjct: 78 GFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFF 137
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
ILMQ C++ + A +L + G P +S+ TL+N R L E ++L M
Sbjct: 138 NILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHA 197
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G PD+ Y+ ++ G C+E + DA ++ ++M G +PN V++ TL+ G C G D+
Sbjct: 198 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDL 257
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M+S+ SP + LI G C G++ +A +++E+ G P + T+ ++
Sbjct: 258 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLID 317
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +ME E +++ I+ D + A I
Sbjct: 318 GCCKEGDMETAFEHQKRMIQENIRLDDVVYTALI 351
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 169/359 (47%), Gaps = 20/359 (5%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
F + N +HS + +I L + K F ++L + Y +PS+ +++I+
Sbjct: 86 FFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIH 145
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
+ PD Q+ L + + + A +F+ HG P+
Sbjct: 146 DD---PDS----------------NSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPH 186
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+ +++ + ++ + ++ KM GV+P++ + +L+ C+ V +A LL
Sbjct: 187 LHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLN 246
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M ++ PD +Y TL++ C+K EA + RM+ G +PDIV YN+++ GFCRE
Sbjct: 247 EMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREV 306
Query: 321 RAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
+ +A ++ E M G P +V+Y +++ LC++G A + + M + P
Sbjct: 307 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTC 366
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ LI +C +G + A V +++L+AG P + T+ ++ C E++ E L E++
Sbjct: 367 NTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEML 425
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 2/279 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY LI +Y + + AL M P N ++ N L A
Sbjct: 253 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEA 312
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G+ P +YN ++R C G I A L N+M ER V PD + L+
Sbjct: 313 LRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINA 372
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ + A+ + + ML G PD ++ L++ C+ ++ A + L M G +P
Sbjct: 373 YCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPS 432
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y+ +V + + ++ +++ G ++ YR L+ LC + A++
Sbjct: 433 YSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFT 492
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
LM KG V +L + GK A +L+E+ K
Sbjct: 493 LMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDK 531
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 111/272 (40%), Gaps = 39/272 (14%)
Query: 122 KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ E V+P + TY IY E N + AL+ M P N IL L
Sbjct: 282 RMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL-CE 340
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ A L + V P+ + N ++ A+C GD+ A + KM E G+ PD +
Sbjct: 341 EGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFT 400
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGF-------------------------VPDTLS 273
++ L+ G C+ +V+ A + L +ML+ GF +PD LS
Sbjct: 401 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 460
Query: 274 ----------YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
Y L+ LC+ K+ A ++ M+ KG D V Y ++ + + G+AI
Sbjct: 461 RKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAI 520
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
A +L++M + L YR G
Sbjct: 521 AASDMLDEMDKRRLMITLKIYRCFSASYAGDG 552
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 161/340 (47%), Gaps = 16/340 (4%)
Query: 60 GSPCRV---QKLIASQSDPLLAKEIFDYAS--RQPNFRHSNSTYLILILKLGRAKYFSLI 114
G+P V LIA+ S L +E F+ + S+ST+ LI+ L
Sbjct: 421 GAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEA 480
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP----LPKQLNR 170
+L + S+ Y ++ S L + E N ALK + M + +P +N
Sbjct: 481 QLLLEHMVSKGYCLSTSFTICLDASFREGNAV-CALKCWDDMGKLGLQPDFIAFSAYING 539
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+ L +Y+ A+ F G++PN +YN ++ A C G+++ A L M +
Sbjct: 540 LCRL-----DYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQN 594
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G++PD+ + IL+ GLCR+ ++ +LL DM + G PDT++Y T++N+ CR K + A
Sbjct: 595 GLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSA 654
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+ +M GC PDI YN + C A KVL+++ + GC P+ V+Y TL+ G
Sbjct: 655 MNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDG 714
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+C + D A +I F P+ + + FC G
Sbjct: 715 ICSD-VLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQG 753
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 3/320 (0%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++ + F LI Y++ L + A + +R M + P N ++ + + ++ L A
Sbjct: 423 PLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLI-MGLCNQGRLDEAQ 481
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G +T S+ I + A G+ A ++ M + G+ PD ++ + GL
Sbjct: 482 LLLEHMVSKGYCLST-SFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGL 540
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR VN A +M +G VP+ +Y +++++LCR + EA KL M+ G PDI
Sbjct: 541 CRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDI 600
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
N ++ G CREG+ +L DM SNG P+ V+Y T++ C + A +M
Sbjct: 601 YTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNK 660
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M++ G P + + C+ +++A VL+EL+ G P T+ ++ IC+ +
Sbjct: 661 MLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICS-DV 719
Query: 427 MEKLGEVLNEIVKVEIKGDT 446
+++ + ++K+ + +T
Sbjct: 720 LDRAMILTGRLIKMAFQPNT 739
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 34/299 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A++L + A + G + +N ++ A+ G A+ L+ M + G+ P ++
Sbjct: 407 LDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNY 466
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFV--------------------------------- 268
L+ GLC + +++ A LLE M++KG+
Sbjct: 467 LIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGL 526
Query: 269 -PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++++ +N LCR + EAY+ M +G P+ YN+++ CR G +A K
Sbjct: 527 QPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALK 586
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+ ++M NG +P++ + L+ GLC +G ++ + M S G +P + +I +C
Sbjct: 587 LQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYC 646
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ A + ++L AG P T+ + + +C+ + + G+VL+E+V + D+
Sbjct: 647 RAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDS 705
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 33/290 (11%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A F M +P N ++ L HR +R A L + G++PN SYNI++
Sbjct: 203 AWNVFEEMAARGPRPSLATFNAMI-LGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILI 261
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C G A+ LF +M G P V +Y IL+ LC + ++ A L ++M G
Sbjct: 262 KGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQ 321
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG------------- 315
+T+++ L++ + ++ +A MK +G PD +N + G
Sbjct: 322 ANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHD 381
Query: 316 -------------------FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
C + R DA ++L G ++ + L+ +G+
Sbjct: 382 HDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGL 441
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ A + ++M G +P S + LI G CN G++DEA +LE ++ G
Sbjct: 442 HEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 67/317 (21%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ R AF LF+ H+ G P +YNI++ C G + A LF++M + G+ + ++
Sbjct: 269 WSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFN 328
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT------------------------ 276
+L+ G + ++++A +M +G VPD+ ++
Sbjct: 329 VLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSH 388
Query: 277 --------LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
L+ LC +L +A++LL +G + +N ++ + +EG +A ++
Sbjct: 389 MLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFEL 448
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF---------------- 372
M G P+ ++ L+ GLC+QG D A+ ++ M+SKG+
Sbjct: 449 YRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFRE 508
Query: 373 ------------------SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P F A I G C + V+EA E+ G P+ T+
Sbjct: 509 GNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTY 568
Query: 415 VMIVPQIC-AGEEMEKL 430
I+ +C AG E L
Sbjct: 569 NSIISALCRAGNMTEAL 585
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 3/255 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+ + G P+ + ++R +G++ A+ +F +M RG P + ++ ++
Sbjct: 168 ALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMIL 227
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + V A LL M G VP+ SY L+ C R+A+KL M GC P
Sbjct: 228 GFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEP 287
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V YN +V C EGR +A ++ ++M G N +++ L+ G G D A
Sbjct: 288 TVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAY 347
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M ++G P + + G K A ++ + G D M+V ++C
Sbjct: 348 REMKARGLVPDSCTFNIIAAG---AYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWD 404
Query: 425 EEMEKLGEVLNEIVK 439
++ E+L ++
Sbjct: 405 CRLDDAWELLRGAIE 419
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%)
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
+ + AF G + A + ++ G P + + L++ L R +V+ A ++ E+M +
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P ++ ++ C + +R A LL M G P++ YN ++ G C G + DA
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDA 273
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
K+ E+M +GC P +V+Y LV LC +G A++ M G + + LI G
Sbjct: 274 FKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDG 333
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ G++D+AC E+ G P T+ +I
Sbjct: 334 YAKTGRMDQACAAYREMKARGLVPDSCTFNIIA 366
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%)
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA +L R++ G P + ++ R G A V E+M + G P+L ++ ++
Sbjct: 167 EALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATFNAMI 226
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C +G+ VA + +M G P+ + LIKG C G +A + EE+ ++G
Sbjct: 227 LGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCE 286
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P T+ ++V +C M + + +E+ +V I+ +T
Sbjct: 287 PTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANT 324
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R L A L G+ N Y ++ C G +S A + M GV D
Sbjct: 300 RGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVV 359
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ ++ G C K + A L E+M +G D +++T L+N LCR +L+EA ++L M
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG + D+V Y ++ G+C+ G ++A +V +M PN+V+Y L GLC QG
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + + M +KG + ++LI G C G +++A ++ E+ AG T+ ++
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIK 443
+C E ++ +L E++ IK
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIK 564
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 136/261 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF+ K G+ + ++ ++ C G++ A + +M ++G+ DV +Y +
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ + A + +M+ + P+ ++YT L + LC++ +R A +LL M KG
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
++ YN+++ G C+ G A +++ +M + G ++ +Y TL+ LC G FD A
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+Q M+ KG P + + L+ GFC G+V+ +LE +L+ P+ T+ ++ Q
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C + M+ E+ + E+
Sbjct: 613 CIDKNMKSTTEIYKGMHSQEV 633
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 146/288 (50%), Gaps = 2/288 (0%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L+ ++ + A + + HGV + + ++ FC GD++ A LF +M +RG+
Sbjct: 331 LLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAA 390
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D ++ L+ GLCR ++ A +L++M++KG D ++YT L++ C++ + EA+++
Sbjct: 391 DRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVH 450
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + P++V Y + G C++G A ++L +M + G N+ +Y +L+ GLC
Sbjct: 451 NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G + A + M M + G LI C G+ D A +L+E+L G P T+
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGK 462
+++ C +E ++L +++ ++ + +V ++ Y I K
Sbjct: 571 NVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN--VVTYNSLMKQYCIDK 616
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 2/229 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + AF + V PN +Y + C GD+ A L ++M +G+ +V +
Sbjct: 440 RGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYT 499
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC+ + +A+ ++ +M G D +YTTL+++LC+ + A+ +L M
Sbjct: 500 YNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEML 559
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-DQGMF 357
KG P I YN ++ GFC GR K+LE M PN+V+Y +L+ C D+ M
Sbjct: 560 DKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMK 619
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ Y + M S+ +P+ + + LIKG C + EA +E+++ G
Sbjct: 620 STTEIY-KGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 11/255 (4%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
P+ +L + ++G+ P+ +S N ++ + I++ L +K +V S+ IL+
Sbjct: 211 PSAELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDK--------NVCSHNILL 262
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ L ++ A ++M + PD ++Y T+++ C + +L A KLL M KG
Sbjct: 263 KALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLE 319
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+ Y +V+ C +G+ DA +VLEDM +G + V + T++ G C +G A++
Sbjct: 320 SNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRL 379
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M +G + ALI G C G++ EA VL+E++ G T+ +++ C
Sbjct: 380 FEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCK 439
Query: 424 GEEMEKLGEVLNEIV 438
M + V NE+V
Sbjct: 440 RGNMVEAFRVHNEMV 454
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 2/344 (0%)
Query: 71 SQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTP 130
S+ D A+ +F+ ++ T+ LI L RA D +L + + V
Sbjct: 369 SKGDLAAARRLFEEMQKR-GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDV 427
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+T LI Y + A + M+ P + + L + +R A +L
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD-VRAANELLH 486
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
G+ N +YN ++ C G++ A + +M G DV +Y L+ LC+
Sbjct: 487 EMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ +RA ++L++ML+KG P +Y L+N C ++ KLL M K P++V YN
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYN 606
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ +C + ++ + M S PN +Y L+ G C A + Q MI K
Sbjct: 607 SLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEK 666
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G S ALI+ K EA +++ G D +
Sbjct: 667 GLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVY 710
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 97/224 (43%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G + +Y ++ C +G+ A+ + +M ++G+ P + +Y +
Sbjct: 513 LEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNV 572
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C +V LLE ML K P+ ++Y +L+ C K ++ ++ M +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ YN ++ G C+ +A ++M G SY L+ L + F A+
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEAR 692
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ M ++G + V + N ++ + +EL++A
Sbjct: 693 VFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEA 736
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
+ +LL + G P S +L+ L L EA L + K ++ +N ++
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLK 263
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
GR DAC+ ++M S P++V+Y T+V G C +G + A K + M +KG
Sbjct: 264 ALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ +V ++I CN G+V +A VLE++ G A + ++ C+ ++ +
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380
Query: 435 NEIVKVEIKGD 445
E+ K + D
Sbjct: 381 EEMQKRGLAAD 391
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 4/385 (1%)
Query: 61 SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILI 119
SP V +++ S+ LA F +A +Q F ++ +Y LI LG+ K F++I +++
Sbjct: 112 SPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVN 171
Query: 120 TLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
+K + +T F + + YA S A+ TF M +F K NR+L+ L+ R
Sbjct: 172 DMKRKGV-LTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSR 230
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
L A ++F +P+ KSY I++ + ++ ++ +M + G PDV +Y
Sbjct: 231 QVL-SAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTY 289
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL+ C+ + + A++L +M +K P + TL+N L ++L EA + R K
Sbjct: 290 GILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKA 349
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G P+ YN VV +C R DA +++++M +G PN +Y ++ L
Sbjct: 350 SGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTE 409
Query: 360 AKKYMQLMIS-KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M S + P S +++ FCN+ KV+ A V + + G P + +++
Sbjct: 410 AFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILI 469
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIK 443
+C +++ + E++ V I+
Sbjct: 470 NSLCHENKLDIACKYFQEMLDVGIR 494
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 7/287 (2%)
Query: 76 LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
L A+ +FD + F +Y IL+ G+ K +D++ +K E + P + TY
Sbjct: 233 LSAQNVFD-KMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFE--PDVVTY 289
Query: 136 --LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
LI Y + D A++ FR M NC+P P ++ L + R L A + F+ +
Sbjct: 290 GILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRR-LSEALEFFRRSK 348
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G P T +YN ++ A+C++ I AY + ++M + GV P+ +Y I++ L + +
Sbjct: 349 ASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTT 408
Query: 254 RAVDLLEDMLNKGFVPDTLS-YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + E M ++ T+S Y ++ C K+ A K+ RMK KG +P + ++ +
Sbjct: 409 EAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSIL 468
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ C E + ACK ++M G P + L L + G D
Sbjct: 469 INSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDT 515
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+LE+L N A FK A K G + NT+SYN ++ + ++ + L N M
Sbjct: 116 VLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKR 175
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+GV+ E++ ++ + R +V A++ E M G ++ + LL++L + +++
Sbjct: 176 KGVLTK-ETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLS 234
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A + +MK++ PDI Y ++ G+ +E + +V +M G P++V+Y L+
Sbjct: 235 AQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILIN 294
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C +D A + + M SK P + LI G +V ++ EA +G AP
Sbjct: 295 AYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAP 354
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
T+ +V C ++ +++E+ K + ++R
Sbjct: 355 ETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSR 392
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 163/340 (47%), Gaps = 4/340 (1%)
Query: 110 YFSLIDDILITL-KSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+F+ +D+ L T + H PS F L+ A++ L R M F P
Sbjct: 47 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
L ++ L H N + AF K G P+ ++ ++R C G I A LF+K
Sbjct: 107 TLAIVINSLC-HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G P+V +Y L+ GLC+ + A+ LL M P+ + ++TL++SLC+ ++
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA+ + M KG +P+IV YN+++ G C+ ++ +M + +P++ + T
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V LC +GM A + +MI +G P+ +AL+ G C +VD A V + ++
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ ++ C + ++K + E+ + E+ +T
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A++ RSM + NC+P + +++ L R + AF+
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ-VTEAFN 231
Query: 188 LFKSAHKHGVLPNTKSYNIMMR-----------------------------------AFC 212
+F G+ PN +YN ++ A C
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G ++ A+ + + M RGV P+V +Y LM G C +++V+ AV + + M++K V + +
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SY TL+N C+ + + +A L M + P+ V YNT++ G C GR DA + +M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ G +P+LV+YRTL LC D A ++ + + P + ++ G C G++
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++A + L G P+ T+ +++ +C + + ++ +E+ K
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 155/328 (47%), Gaps = 2/328 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
LK H P + FT LI+ AL F M+ +P ++ L N
Sbjct: 132 LKLGHQP-DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A L +S + PN ++ ++ + C + ++ A+ +F++M +G+ P++ +Y
Sbjct: 191 T-SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GLC+ + L+ +M++ +PD + T++++LC++ + EA+ ++ M +
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++V YN ++ G C A KV + M C+ N++SY TL+ G C D A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M + +P+ + LI G C+VG++ +A + E++ G+ P T+ +
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C ++K +L I D +I
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQI 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 3/330 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKT--FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY I+ L + T M++ P LN +++ L + A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK-EGMVAEA 299
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ GV PN +YN +M C ++ +A +F+ M + + +V SY L+ G
Sbjct: 300 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 359
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V++A+ L E+M + P+T++Y TL++ LC +L++A L M +G PD
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y T+ C+ A +L+ + + P++ Y T++ G+C G + A+
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P+ + +I G C G + EA + E+ K G +P++ T+ +I
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
E + E+L E++ D +G+
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 42/282 (14%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H V P++ TY L+ + N D A+K F +M+ +C N ++ ++ +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS-V 366
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A LF+ + + PNT +YN ++ C G + A +LF++M RG +PD+ +YR L
Sbjct: 367 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Query: 243 -----------------------------------MQGLCRKSQVNRAVDLLEDMLNKGF 267
+ G+CR ++ A DL ++ +KG
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 486
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ +Y +++ LC++ L EA KL M GC+P+ YN + GF R A+ +
Sbjct: 487 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 546
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK----KYMQ 365
+LE+M + G ++ + LVG L D G+ K KY+Q
Sbjct: 547 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLN 169
F +DD L ++ T + L+ YA++ + +A + E + P N
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 173
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
R+L+LLV R + A L+ + S +++R C G + L +
Sbjct: 174 RLLKLLVEQRRW-DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 232
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G +P V Y +L+ G CR+ + R + LL +M KGF+P ++Y +L+N L +K L +
Sbjct: 233 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 292
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
L M+ +G +P++ YN+V+ C+ A A +L+ M ++GC P+++++ TL+
Sbjct: 293 IGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLIT 352
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC +G A+ +++ I + +P+ LI GFC G++ A +L E++ G P
Sbjct: 353 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 412
Query: 410 HEDTW-VMIVPQICAGEEMEKL 430
T+ +I + AG+ E L
Sbjct: 413 DVVTFGALIHGLVVAGKVSEAL 434
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 161/370 (43%), Gaps = 36/370 (9%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+ I + + ++ ++ +I + +A+ + M
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
C P N ++ L H ++R A + A + + PN SY ++ FC G+
Sbjct: 336 FASGCDPDIITFNTLITGLC-HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 394
Query: 217 ISIAYTLF-----------------------------------NKMFERGVMPDVESYRI 241
+ A L KM ER V PDV Y +
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 454
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+K + A ++LE+ML K PD Y TL++ R + L +A K+ M+ KG
Sbjct: 455 LISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 514
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV N ++ G+C+ G +A + +M GC+P+ +Y T++ G QG + A
Sbjct: 515 VRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 574
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ MI + P+ +LI G+C G D A G+ + +P+ T+ +++ +
Sbjct: 575 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 634
Query: 422 CAGEEMEKLG 431
+++ + G
Sbjct: 635 FKKDKVLRAG 644
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 105/208 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ L A ++ + + V P+ Y ++ F + ++ A +F M +GV PD+ S
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 521
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+++G C+ ++ A+ + +M G +PD +YTT+++ ++ L A + LC M
Sbjct: 522 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 581
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ C P++V Y++++ G+C+ G A + +M + PN+V+Y L+G L +
Sbjct: 582 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVL 641
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGF 386
A Y + M+ SP+ H L+ G
Sbjct: 642 RAGLYFETMLLNHCSPNDVTLHYLVNGL 669
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILMQG 245
D +S G P ++ A+ G + A + ++ E+ G +P+V L++
Sbjct: 119 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 178
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + + A L ++ML + D S L+ LC + ++ E KL+ GC P
Sbjct: 179 LVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPH 238
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN ++ G+CR G +L +M + G LP LV+Y +L+ L +G +
Sbjct: 239 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 298
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G SP+ + +++I C +A +L+++ +G P T+ ++ +C
Sbjct: 299 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 358
Query: 426 EMEKLGEVLNEIVKVEIK 443
+ K L E ++ E+
Sbjct: 359 HVRKAEHFLREAIRRELN 376
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 51/311 (16%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+++ LI + ++ A MLE N +P +++ + N L A +F+
Sbjct: 450 NIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN-LGDARKIFE 508
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
GV P+ S N M++ +C G +S A + M + G +PD +Y ++ G ++
Sbjct: 509 FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+N A+ L DM+ + P+ ++Y++L+N C+ A L M+ + +P++V Y
Sbjct: 569 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 628
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL------------------- 351
++ ++ + + A E M N C PN V+ LV GL
Sbjct: 629 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 688
Query: 352 -------------------------------CDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
C M A + M KG+ P+
Sbjct: 689 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 748
Query: 381 ALIKGFCNVGK 391
+L+ GFC+VGK
Sbjct: 749 SLLYGFCSVGK 759
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 98/261 (37%), Gaps = 59/261 (22%)
Query: 124 EHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
EH V P + + +IK Y + + A+ +M + C P ++ N
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 570
Query: 182 ---LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
LR D+ K K PN +Y+ ++ +C GD A LF M + P+V +
Sbjct: 571 NGALRWLCDMIKRKCK----PNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVT 626
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS------------------------- 273
Y IL+ L +K +V RA E ML P+ ++
Sbjct: 627 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSE 686
Query: 274 -------------------------YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
Y ++ SLCR LREA RM KG P+ +
Sbjct: 687 VHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 746
Query: 309 YNTVVLGFCREGRAIDACKVL 329
+ +++ GFC G++++ +L
Sbjct: 747 FLSLLYGFCSVGKSMNWRTIL 767
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 1/198 (0%)
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLG 315
D L+ M G P L+ + L +A + R++ + G P++ H N ++
Sbjct: 119 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 178
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ R DA K+ ++M + S LV GLC +G + K ++ G PH
Sbjct: 179 LVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPH 238
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
+ LI G+C G + +L E+ G P T+ ++ + ++EK+G +
Sbjct: 239 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 298
Query: 436 EIVKVEIKGDTRIVEAGI 453
E+ K + + +I + I
Sbjct: 299 EMRKRGLSPNVQIYNSVI 316
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 136/265 (51%), Gaps = 8/265 (3%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A DLF + P+ ++NI++ FC +G + T+F M ++G+ P+V +Y
Sbjct: 229 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 288
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C QVN+A + M G PDT SY ++N C+ KK+ EA L +M K
Sbjct: 289 LMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKN 348
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA- 360
P++V Y +++ G C+ G+ A K++++M G P++++Y +++ LC D A
Sbjct: 349 IIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 408
Query: 361 -------KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ + + KG++ +I+GFC G +EA +L ++ G P T
Sbjct: 409 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIV 438
+ +I+ + +E + ++L E++
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMI 493
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 3/234 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDL+ G+ P+ +Y+ ++ F G + A LFNKM + PDV ++ I
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ ++ + M+ +G P+ ++Y +L++ C K++ +A + M G
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
NPD YN ++ GFC+ + +A + + M +PN+V+Y +L+ GLC G A
Sbjct: 314 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYAL 373
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
K + M +G P +++ C +VD+A +L +L + ED +V
Sbjct: 374 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL---KDQVFEDLFV 424
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 130/229 (56%), Gaps = 24/229 (10%)
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
T+ S+++ C L KQ+N+ A +F + + GV P+T+SYNIM+ F
Sbjct: 285 TYCSLMDGYC--LVKQVNK--------------ANSIFNTMAQGGVNPDTQSYNIMINGF 328
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A LF KM + ++P+V +Y L+ GLC+ +++ A+ L+++M ++G PD
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMK--------VKGCNPDIVHYNTVVLGFCREGRAI 323
++Y+++L++LC+ ++ +A LL ++K VKG N D+ Y ++ GFC +G
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+A +L M NG +P+ +Y ++ L + D+A+K ++ MI++G
Sbjct: 449 EALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 28/315 (8%)
Query: 151 KTFRSMLEFNCKPLPKQLNRILEL------LVTHRNYLR---------PAFDLFKSAHKH 195
K S+++ NC L+R +EL LVT + +F +F + K
Sbjct: 65 KILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKK 124
Query: 196 GVLPNT-------------KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
G PN SY ++ C G A L ++ + V P+V Y +
Sbjct: 125 GYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTI 184
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ +C+ VN A DL +M+++G PD ++Y+ L++ KL++A L +M ++
Sbjct: 185 IDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENI 244
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD+ +N +V GFC++G+ + V M G PN+V+Y +L+ G C + A
Sbjct: 245 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANS 304
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M G +P + +I GFC + KVDEA + +++ P+ T+ ++ +C
Sbjct: 305 IFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC 364
Query: 423 AGEEMEKLGEVLNEI 437
++ ++++E+
Sbjct: 365 KSGKISYALKLVDEM 379
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 13/290 (4%)
Query: 128 VTPSLFTYLIKI---YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
++P + TY I + L D A+ F M+ N KP N +++ ++
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKD-AIDLFNKMILENIKPDVYTFNILVDGFCKDGK-MKE 266
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+F K G+ PN +Y +M +C ++ A ++FN M + GV PD +SY I++
Sbjct: 267 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMIN 326
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ +V+ A++L + M K +P+ ++YT+L++ LC+ K+ A KL+ M +G P
Sbjct: 327 GFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPP 386
Query: 305 DIVHYNTVVLGFCREGRAIDAC--------KVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
DI+ Y++++ C+ + A +V ED+ G ++ +Y ++ G C +G+
Sbjct: 387 DIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGL 446
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
F+ A + M G P +I + D A +L E++ G
Sbjct: 447 FNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 119/255 (46%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + V PN YN ++ + C ++ A+ L+++M G+ PDV +Y L
Sbjct: 160 RAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSAL 219
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G ++ A+DL M+ + PD ++ L++ C+ K++E + M +G
Sbjct: 220 ISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 279
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V Y +++ G+C + A + M G P+ SY ++ G C D A
Sbjct: 280 KPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMN 339
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M K P+ +LI G C GK+ A +++E+ G P T+ I+ +C
Sbjct: 340 LFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALC 399
Query: 423 AGEEMEKLGEVLNEI 437
+++K +L ++
Sbjct: 400 KNHQVDKAIALLTKL 414
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
+ +IL LV Y A L + G+ N + NI++ F G +++++F
Sbjct: 62 EFGKILGSLVKINCY-HTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFAN 120
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ ++G P+V + L++GLC K +SY TL+N LC+ +
Sbjct: 121 ILKKGYDPNVITLTTLIKGLCLK----------------------VSYGTLINGLCKVGQ 158
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
R A +LL R+ K P++V YNT++ C+ +A + +M S G P++V+Y
Sbjct: 159 ARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSA 218
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G G A MI + P + L+ GFC GK+ E V ++K G
Sbjct: 219 LISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 278
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
P+ T+ ++ C +++ K + N + + + DT+
Sbjct: 279 IKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ 319
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY L+ Y ++A F +M + P + N ++ + + A
Sbjct: 279 IKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKK-VDEA 337
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LFK H ++PN +Y ++ C +G IS A L ++M +RGV PD+ +Y ++
Sbjct: 338 MNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDA 397
Query: 246 LCRKSQVNRAVDLL--------EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
LC+ QV++A+ LL ED+ KG+ D +YT ++ C K EA LL +M
Sbjct: 398 LCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKM 457
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ G PD Y ++L ++ A K+L +M + G L
Sbjct: 458 EDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 106/234 (45%), Gaps = 14/234 (5%)
Query: 224 FNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
FN++ ++ P + + ++ L + + + A+ L M KG + ++ L+N
Sbjct: 47 FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL-------------GFCREGRAIDACKVL 329
+ + ++ + + KG +P+++ T++ G C+ G+A A ++L
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+ PN+V Y T++ +C + + A M+S+G SP ALI GF V
Sbjct: 167 RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIV 226
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GK+ +A + +++ P T+ ++V C +M++ V ++K IK
Sbjct: 227 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 280
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 197/468 (42%), Gaps = 88/468 (18%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDI------ 117
L + P L+ + + P+ +HS + +IL L + +F L+D +
Sbjct: 53 LYSGYGGPSLSWSFYSWTDSLPSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQRELL 112
Query: 118 --------LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
L+ SE V +F++L+ YA+S + + ++ F ++ KP +
Sbjct: 113 SSPLVLRSLVGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACT 172
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA------------------- 210
+L LV R + +FK K GV+ N YN+++ A
Sbjct: 173 VLLNSLVKER-LTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEE 231
Query: 211 -------FCFNGDISI---------AYTLFNKMFERGVMPDVESYRILMQGL-------- 246
F +N IS+ A ++ ++M GV PD+ +Y L+ G
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMRE 291
Query: 247 --------------------------CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
CR + ++ A+ L E M ++GF P ++Y ++L
Sbjct: 292 ATRLFRKIKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRK 351
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC ++REA +LL M VK PD + NT++ +C+ + A KV + M +G +
Sbjct: 352 LCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+ SY+ L+ G C D AK+ + MI KG SP +S L+ GF N K DE + E
Sbjct: 412 MYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPE 471
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
E K G P + ++ +IC E+++ + + K + GD+ I
Sbjct: 472 EFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVI 519
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A L + G P +YN ++R C +G I A L +M + + PD +
Sbjct: 321 NDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITC 380
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+ C+ + AV + + M+ G D SY L++ C+ +L A + L M
Sbjct: 381 NTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIE 440
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG +P Y+ +V GF + + + K+ E+ G P++ YR L+ +C D
Sbjct: 441 KGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDY 500
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
AK + M KG + + + GKV +A + +
Sbjct: 501 AKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALFD 541
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI Y N D AL+ M P N IL L +R A L
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKL-CEDGRIREANRLLTEM 368
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ P+ + N ++ A+C D+ A + KM E G+ D+ SY+ L+ G C+ ++
Sbjct: 369 SVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A + L M+ KG P +Y+ L++ + K E KL + +G PD+ Y +
Sbjct: 429 DNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGL 488
Query: 313 VLGFCREGRAIDACKVL-EDMPSNGCLPNLVSYRTLV------GGLCD-QGMFDVAKKYM 364
+ C+ +D KVL E M G + + V Y T+ G + D +FDV
Sbjct: 489 IRRICKL-EQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALFDVMYN-R 546
Query: 365 QLMISKGFSPHFSVSHA 381
+LM++ S S+A
Sbjct: 547 RLMVNLKLYKSLSASYA 563
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 163/340 (47%), Gaps = 4/340 (1%)
Query: 110 YFSLIDDILITL-KSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
+F+ +D+ L T + H PS F L+ A++ L R M F P
Sbjct: 47 HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
L ++ L H N + AF K G P+ ++ ++R C G I A LF+K
Sbjct: 107 TLAIVINSLC-HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G P+V +Y L+ GLC+ + A+ LL M P+ + ++TL++SLC+ ++
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA+ + M KG +P+IV YN+++ G C+ ++ +M + +P++ + T
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+V LC +GM A + +MI +G P+ +AL+ G C +VD A V + ++
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ ++ C + ++K + E+ + E+ +T
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ TY LI + A++ RSM + NC+P + +++ L R + AF+
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ-VTEAFN 231
Query: 188 LFKSAHKHGVLPNTKSYNIMMR-----------------------------------AFC 212
+F G+ PN +YN ++ A C
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G ++ A+ + + M RGV P+V +Y LM G C +++V+ AV + + M++K V + +
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SY TL+N C+ + + +A L M + P+ V YNT++ G C GR DA + +M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ G +P+LV+YRTL LC D A ++ + + P + ++ G C G++
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++A + L G P+ T+ +++ +C + + ++ +E+ K
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 155/328 (47%), Gaps = 2/328 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
LK H P + FT LI+ AL F M+ +P ++ L N
Sbjct: 132 LKLGHQP-DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A L +S + PN ++ ++ + C + ++ A+ +F++M +G+ P++ +Y
Sbjct: 191 T-SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GLC+ + L+ +M++ +PD + T++++LC++ + EA+ ++ M +
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++V YN ++ G C A KV + M C+ N++SY TL+ G C D A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ M + +P+ + LI G C+VG++ +A + E++ G+ P T+ +
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 421 ICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C ++K +L I D +I
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQI 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 3/330 (0%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKT--FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY I+ L + T M++ P LN +++ L + A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCK-EGMVAEA 299
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
D+ GV PN +YN +M C ++ +A +F+ M + + +V SY L+ G
Sbjct: 300 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 359
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ V++A+ L E+M + P+T++Y TL++ LC +L++A L M +G PD
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y T+ C+ A +L+ + + P++ Y T++ G+C G + A+
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P+ + +I G C G + EA + E+ K G +P++ T+ +I
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 426 EMEKLGEVLNEIVKVEIKGDTRIVEAGIGL 455
E + E+L E++ D +G+
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
RN + A +F + + N SYN ++ +C + A LF +M + + P+ +
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC ++ A+ L +M+ +G +PD ++Y TL + LC+ + L +A LL ++
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+PDI Y T++ G CR G DA + ++ S G PN+ +Y ++ GLC QG+
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A K M G SP+ + + +GF + +LEE+L G + T ++V
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+ + + ++L +IV
Sbjct: 568 GMLSDDGLDQSVKQILCKIV 587
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H V P++ TY L+ + N D A+K F +M+ +C N ++ ++ +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS-V 366
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A LF+ + + PNT +YN ++ C G + A +LF++M RG +PD+ +YR L
Sbjct: 367 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Query: 243 -----------------------------------MQGLCRKSQVNRAVDLLEDMLNKGF 267
+ G+CR ++ A DL ++ +KG
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 486
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ +Y +++ LC++ L EA KL M GC+P+ YN + GF R A+ +
Sbjct: 487 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 546
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+LE+M + G ++ + LVG L D G+ K+ +
Sbjct: 547 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 30/191 (15%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL--VTHRNY------- 181
SLF ++ A +PD L T+R++ ++ CK + L++ + LL + N+
Sbjct: 406 SLFHEMV---ARGQIPD--LVTYRTLSDYLCKN--RHLDKAMALLKAIEGSNWDPDIQIY 458
Query: 182 ------------LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
L A DLF + G+ PN +YNIM+ C G ++ A LF++M +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G P+ +Y ++ +G R ++ R ++LLE+ML +GF D +S TTLL + L +
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGLDQ 577
Query: 290 AYK-LLCRMKV 299
+ K +LC++ +
Sbjct: 578 SVKQILCKIVI 588
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 167/355 (47%), Gaps = 11/355 (3%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P +V ++ QSD +A + F +A RQ +RH Y +++ L + K +L +
Sbjct: 103 PRQVCAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLM 162
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
P F +++ Y+ + A++ M + +P N + +LV N
Sbjct: 163 VRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMA-NK 221
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G+ PN +YN +++ +C + A L +M +G PD SY
Sbjct: 222 LEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYT 281
Query: 242 LMQGLCRKSQVNRAVDLLEDML--NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+M LC+ ++ +L+E M+ NK F PD ++Y TL++ L + EA + L +
Sbjct: 282 VMGFLCQDKRIKEVRNLMEKMVKDNKLF-PDQVTYNTLVHMLSKHGHADEALEFLRETEE 340
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G D V Y+ +V FC +GR A +++ +M + GC P++V+Y +V GLC G +
Sbjct: 341 RGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEE 400
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
AKK +Q M G P+ AL+ G C G EA E++ E ED W
Sbjct: 401 AKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEA----REMMNTSE---EDWW 448
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 1/307 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L + + + L + + V ++ ++ + DRA + M
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ C P ++ L + A + + +KHG PNT SY ++ C +G+
Sbjct: 374 ITKGCSPDVVTYTAVVNGLCK-VGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGN 432
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A + N E P+ +Y ++M GL R+ +++ A D++ +ML KGF P +
Sbjct: 433 SLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINL 492
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+ SLC ++K+ EA K + +GC + V++ TV+ GFC+ A +L+DM N
Sbjct: 493 LIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNN 552
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ V++ ++ L +G + A Y M+ KG P A+I +C +G+V+E
Sbjct: 553 KHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELI 612
Query: 397 GVLEELL 403
+L ++L
Sbjct: 613 KLLGKML 619
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 166/355 (46%), Gaps = 8/355 (2%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAE 142
A +PN N+ +L++ K ++ + + +TP++ TY LIK Y +
Sbjct: 200 AGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLV------GITPNVVTYNCLIKGYCD 253
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ A++ M C P ++ L + + K + + P+
Sbjct: 254 LYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQV 313
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+YN ++ +G A + ERG D Y ++ C + +++RA +++ +M
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ KG PD ++YT ++N LC+ K+ EA K+L +M GC P+ V Y ++ G C+ G +
Sbjct: 374 ITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNS 433
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
++A +++ + PN ++Y ++ GL +G A ++ M++KGF P + L
Sbjct: 434 LEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLL 493
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
IK C K++EA +EE L G A + + ++ C + ++ +L+++
Sbjct: 494 IKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDM 548
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 123/252 (48%), Gaps = 1/252 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ +++ +M ++ G + A + M + GV P++ + L +++ +A
Sbjct: 166 GIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKA 225
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ LE M G P+ ++Y L+ C ++ A +L+ M KGC PD V Y TV+
Sbjct: 226 LRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGF 285
Query: 316 FCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
C++ R + ++E M N P+ V+Y TLV L G D A ++++ +GF
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQV 345
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
A++ FC G++D A ++ E++ G +P T+ +V +C ++E+ ++L
Sbjct: 346 DKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKML 405
Query: 435 NEIVKVEIKGDT 446
++ K K +T
Sbjct: 406 QQMYKHGCKPNT 417
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 40/299 (13%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P + TY ++ + + A K + M + CKP +L L H N L A
Sbjct: 379 SPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLE-AR 437
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ ++ + PN +Y+++M G +S A + +M +G P +L++ L
Sbjct: 438 EMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSL 497
Query: 247 CRKSQVNRAVDLLEDMLNKGFV-----------------------------------PDT 271
C + ++N A +E+ LN+G PD
Sbjct: 498 CLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDA 557
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
+++T ++++L +K ++ EA +M KG +P V Y V+ +C+ GR + K+L
Sbjct: 558 VTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGK 617
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M S +Y ++ LC+ G + A K + L++ + H L++ + + G
Sbjct: 618 MLSRS--KCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKG 674
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 86/170 (50%)
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + Y +L L + K + A ++L M +G + V++ + R G+ +A +VL
Sbjct: 135 DPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVL 194
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M G PNL+ T + L + A ++++ M G +P+ + LIKG+C++
Sbjct: 195 TMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDL 254
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+V+ A ++ E+ G P + ++ ++ +C + ++++ ++ ++VK
Sbjct: 255 YQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVK 304
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 178/367 (48%), Gaps = 3/367 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A F +A+++P F H + TY ++ LG+ + F + +L + +E +T FT
Sbjct: 192 AFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEM-AEKELLTMETFTVCF 250
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
K +A + +A+ M ++ K + +N +L+ L + + A +F+ H
Sbjct: 251 KAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAK-LGKEALTIFEKLHGR-F 308
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
PN ++Y +++ +C ++ A ++N+M + PD+ ++ +++GL R + + A+
Sbjct: 309 TPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIK 368
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E M KG PD SYT L+ C++ K++EA + M+ GC PD Y ++ GF
Sbjct: 369 LFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFG 428
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ R +L++M +NGC P+ +Y L+ + ++ M D A + + MI G P
Sbjct: 429 NQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTH 488
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++K + + +E+ G P ++++ + + + + + G+ L E+
Sbjct: 489 TYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEM 548
Query: 438 VKVEIKG 444
++ +K
Sbjct: 549 IEKGMKA 555
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 129/321 (40%), Gaps = 44/321 (13%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD--RALKTFRSMLE 158
L+ LGRAK L + L + H TP+L TY + + + + A K + M++
Sbjct: 284 LLDSLGRAK---LGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMID 340
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+ KP N +LE L+ + A LF+ G P+ KSY I++R FC +
Sbjct: 341 EDFKPDIVAHNTMLEGLLRCKKR-SDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMK 399
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A F +M G PD Y L+ G + +++ LL++M G PD +Y L+
Sbjct: 400 EAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALI 459
Query: 279 NSLCRK----------KKLRE--------AYKLLCR-----------------MKVKGCN 303
+ K KK+ E Y ++ + MK+KGC
Sbjct: 460 KLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCC 519
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD Y + G GR +A K LE+M G + Y G D+ ++
Sbjct: 520 PDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEEL 579
Query: 364 MQLMISKGFSPHFSVSHALIK 384
Q M FS F S+ + +
Sbjct: 580 AQKM---KFSGKFEASNVIAR 597
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 108/279 (38%), Gaps = 38/279 (13%)
Query: 171 ILELLVTHRNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+LE+L + +PAF F +A K G ++K+YN MM +L +M E
Sbjct: 178 VLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAE 237
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+ ++ +E++ + + + +AV +LE M + + LL+SL R K +E
Sbjct: 238 KELLT-METFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKE 296
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A + ++ GR PNL +Y L+
Sbjct: 297 ALTIFEKL---------------------HGRFT---------------PNLQTYTVLLN 320
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G C A K MI + F P + +++G K +A + E + G +P
Sbjct: 321 GWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 380
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ ++V C +M++ + E+ + D I
Sbjct: 381 DVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAI 419
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 149/331 (45%), Gaps = 24/331 (7%)
Query: 64 RVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS 123
RV KL+ + L + F P + H +S++ I GR + + + ++ +++
Sbjct: 72 RVLKLLWNHGPKAL--QFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRT 129
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR---- 179
P F + + Y + PDRA+K F SM E C N IL++L +
Sbjct: 130 RRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEM 189
Query: 180 ---------------NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF 224
L+ A++ F K + +Y ++ F G++ A +F
Sbjct: 190 ADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVF 249
Query: 225 NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
N+M GV+P V +Y +Q LC+K V A+ + E+ML KG++P++ +Y ++ LC
Sbjct: 250 NEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHV 309
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
++ +A + + RMK C P++ YN V+ FC V E M CLPNL +Y
Sbjct: 310 GRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTY 369
Query: 345 RTLVGGLCDQGMFD---VAKKYMQLMISKGF 372
L+ + + D A K + M+ +GF
Sbjct: 370 NILISAMFVRKKSDYLLTAGKLLIEMVERGF 400
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 40/305 (13%)
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R++ ++ + P ++R+L+LL H A FKS H + S F
Sbjct: 56 RTLEKYPVEWTPNLVDRVLKLLWNHG---PKALQFFKSLDYHPTYAHVSS--------SF 104
Query: 214 NGDISIA---------YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+ I IA +TL ++M R + P+ +++ I+ + + +RA+ + M
Sbjct: 105 DHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHE 164
Query: 265 KGFVPDTLSYTTLLNSLCRKKK--------------------LREAYKLLCRMKVKGCNP 304
G V D S+ T+L+ LC+ K+ L+EA++ +MK + C
Sbjct: 165 HGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEI 224
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V Y TVV GF G A +V +M G LP++ +Y + LC + + A
Sbjct: 225 DVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVF 284
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ KG+ P+ + + +I+G C+VG++++A + + P+ + +++ C
Sbjct: 285 EEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDA 344
Query: 425 EEMEK 429
EE+EK
Sbjct: 345 EEIEK 349
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 174/372 (46%), Gaps = 21/372 (5%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F + N +HS + +I L + K F ++L + Y +PS+ +++I+
Sbjct: 62 FKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 121
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
+ PD Q+ L + + + A +F+ HG P+
Sbjct: 122 D---PDS----------------NSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHL 162
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ +++ + ++ + ++ KM GV+P++ + +L+ C+ V +A LL +
Sbjct: 163 HACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNE 222
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M ++ PD +Y TL++ C+K EA + RM+ G +PDIV YN+++ GFCREGR
Sbjct: 223 MESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGR 282
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ ++ NG PN V+Y TL+ G C + A + ++M +G P ++
Sbjct: 283 MREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNS 340
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
+++ C GK+ +A +L E+ + P T ++ C +M +V ++++
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 442 IKGDTRIVEAGI 453
+K D +A I
Sbjct: 401 LKPDQFTFKALI 412
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY LI +Y + + AL M P N ++ +R A
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGF-CREGRMREA 286
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ + G PN +Y ++ +C D+ A L M G+ P V +Y +++
Sbjct: 287 LRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRK 344
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + ++ A LL +M + PD ++ TL+N+ C+ + A K+ +M G PD
Sbjct: 345 LCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 404
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ ++ GFC+ A + L +M G P+ +Y LV DQ + +
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPD 464
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ KG SV ALI+ C + K++ A
Sbjct: 465 ELSRKGLFVDISVYRALIRRLCKIDKIESA 494
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP+ TY LI Y N + AL+ M P N IL L ++ A
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL-CEEGKIKDAN 355
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + V P+ + N ++ A+C GD+ A + KM E G+ PD +++ L+ G
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Query: 247 CRKSQVNRAVDLLEDMLNKGF-------------------------VPDTLS-------- 273
C+ +V+ A + L +ML+ GF +PD LS
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475
Query: 274 --YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
Y L+ LC+ K+ A ++ M+ KG D V Y ++ + + G+AI A +L++
Sbjct: 476 SVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQG 355
M + L YR G
Sbjct: 536 MDKRRLMITLKIYRCFSASYAGDG 559
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 173/393 (44%), Gaps = 34/393 (8%)
Query: 63 CRVQKLIASQSDPLLAK-EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
C V K++ S+ +A F + Q + H +Y +++ LG+ K F L+ ++ +
Sbjct: 1453 CLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQM 1512
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN- 180
++ T +++ A ++ A+ F M F K +N +L+ L R+
Sbjct: 1513 VEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSV 1572
Query: 181 --------------------------------YLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L+ A D + +HG P+ +Y ++
Sbjct: 1573 KRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLV 1632
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A+C D Y L ++M +R P+V +Y ILM L + + A+D + + G
Sbjct: 1633 EAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVA 1692
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD Y +L+ L R +L +AY ++ M+ G P++ +NT++ C +A +A K+
Sbjct: 1693 PDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKL 1752
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M C P++ +Y L+ C + + + M K SP FS L+ C
Sbjct: 1753 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCR 1812
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
GKV ++C LEE++ G AP ++T+ +++ ++
Sbjct: 1813 NGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 1845
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 12/257 (4%)
Query: 113 LIDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
++ + L T++ + + +PS+ TY L++ Y M + C P N
Sbjct: 1605 MLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPP-----N 1659
Query: 170 RILELLVTHR----NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
+ ++ H R A D F + GV P+ YN ++ G + AY++
Sbjct: 1660 VVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE 1719
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
+M G+ P+V ++ L+ C SQ A+ LL M + PD +YT LL C+++
Sbjct: 1720 EMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQ 1779
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
++ L+C M K +PD Y +V CR G+ +C LE+M S G P ++
Sbjct: 1780 WVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFD 1839
Query: 346 TLVGGLCDQGMFDVAKK 362
++ L + + V KK
Sbjct: 1840 LVMEKLEKRNLQSVYKK 1856
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 127/241 (52%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
++ L DL +G+ PN +NI A+ G I A +FNKM + G+ PD
Sbjct: 7 NKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAV 66
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY L+ LC+ +V+ A M+N+G P+ + +++L+ LC K + +L M
Sbjct: 67 SYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEM 126
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G +P+IV +NT++ C+EGR ++ ++++ + G P+++SY TL+ G C G
Sbjct: 127 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 186
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A K ++ M+S G P+ + L+ G+C G++D A + ++L G P T+ I
Sbjct: 187 DEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246
Query: 418 V 418
+
Sbjct: 247 L 247
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+F +HG+ P+ SY ++ A C G + A FN+M GV P++ + L+
Sbjct: 49 AMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVY 108
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + +L +MLN G P+ + + T+L +LC++ ++ E +L+ ++ G P
Sbjct: 109 GLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 168
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YNT++ G C G +A K+LE M S G PN SY TL+ G C G D A
Sbjct: 169 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLF 228
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+S G +P + ++ G + EA + ++ +G T+ I+ +C
Sbjct: 229 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLC 286
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN+ SYN ++ +C G I AY+LF KM G+ P V +Y ++ GL + + + A
Sbjct: 200 GLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 259
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L +M+N G +Y T+LN LC+ + EA+K+ + KG +I+ + ++
Sbjct: 260 KELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 319
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ GR DA + +P+NG +P++V+YR + L ++G + M G +P+
Sbjct: 320 LLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPN 379
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ +AL++ + G + A L +L + + T M++ + E
Sbjct: 380 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDE 429
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+LF G+ PN +N ++ C G + L + + GV PDV SY L+ G
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C ++ A LLE M++ G P++ SY TLL+ C+ ++ AY L +M G P +
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YNT++ G + R +A ++ +M ++G + +Y T++ GLC D A K Q
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQS 300
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ SKG + +I G+ ++A + + G P T+ ++ +
Sbjct: 301 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGS 360
Query: 427 MEKLGEVLNEIVKVEIKGDTRIVEA 451
+E+ + + + K +++++ A
Sbjct: 361 LEEFDSLFSAMEKNGTAPNSQMLNA 385
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 155/366 (42%), Gaps = 14/366 (3%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGRAKYFSLIDDILITLKSE-HYPVTPSLF 133
A +IF+ RQ +Y LI KLGR +DD + + VTP++
Sbjct: 49 AMDIFN-KMRQHGLSPDAVSYGALIDALCKLGR------VDDAEVKFNQMINEGVTPNIV 101
Query: 134 TYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+ +Y ++ ++ + F ML P N IL L + L S
Sbjct: 102 VFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ-RLVDS 160
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV P+ SYN ++ C G I A L M G+ P+ SY L+ G C+ +
Sbjct: 161 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGR 220
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A L ML+ G P ++Y T+L+ L + K+ EA +L M G I YNT
Sbjct: 221 IDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNT 280
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C+ +A K+ + + S G N++++ ++G L G + A + + G
Sbjct: 281 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 340
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + + G ++E + + K G AP+ +V ++ ++ + G
Sbjct: 341 LVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 400
Query: 432 EVLNEI 437
L+++
Sbjct: 401 AYLSKL 406
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 3/261 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + +Y LI + + D A K M+ KP N +L + A
Sbjct: 166 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCK-AGRIDSA 224
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ LF+ +G+ P +YN ++ S A L+ M G + +Y ++ G
Sbjct: 225 YSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNG 284
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + V+ A + + + +KG + +++T ++ +L + + +A L + G PD
Sbjct: 285 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPD 344
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y V EG + + M NG PN LV L +G A Y+
Sbjct: 345 VVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 404
Query: 366 LMISKGFSPHFSVSHALIKGF 386
+ + FS S + LI F
Sbjct: 405 KLDERNFSVEASTTSMLISIF 425
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 93/202 (46%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G K ++ DLL M+ G P+ + ++ + + +A + +M+ G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PD V Y ++ C+ GR DA M + G PN+V + +LV GLC ++ +
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M++ G P+ + ++ C G+V E +++ + G P ++ ++
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C +++ ++L +V V +K
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLK 202
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 142/279 (50%), Gaps = 10/279 (3%)
Query: 149 ALKTFRSML-EFNCKPLPKQLNRILELLVTH----RNYLRPAFDLFKSAHKHGVLPNTKS 203
A + F M E +C+P N + ++ H L AF L + + G P+T++
Sbjct: 182 AFRVFEKMSKEESCRP-----NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 236
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y ++++A C G A + ++M + +P+V +Y IL+ LCR+ ++ A + ML
Sbjct: 237 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 296
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G P +++ L+N C++ + A++LL M+ C P+I YN ++ G CR ++
Sbjct: 297 KHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSY 356
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L + NG LP+ V+Y LV G C +G ++A M S G P ALI
Sbjct: 357 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 416
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G C +G++++A G+L ++K G + E T+ ++ C
Sbjct: 417 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 455
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 11/273 (4%)
Query: 179 RNYLRPAFDLF-KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R+ L AF +F K + + PN+ +Y+I++ C G + A+ L +M E+G P
Sbjct: 176 RDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 235
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L++ C ++A+ +L++M K VP+ +YT L++ LCR+ K+ EA + +M
Sbjct: 236 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 295
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P I+ +N ++ G+C+EG + A ++L M C PN+ +Y L+ GLC
Sbjct: 296 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC----- 350
Query: 358 DVAKKY-----MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
V+K Y ++ ++ G P + L+ GFC G+++ A + + AG P
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C +E+ +L +VK I D
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 193/456 (42%), Gaps = 72/456 (15%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A +F+ S++ + R ++ TY ILI L A + + + + +T LI
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKP----------------LPKQLNRILELLVTH--- 178
K + + D+A+K M C P ++ N + ++ H
Sbjct: 242 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 301
Query: 179 ---------------RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ AF L K PN ++YN +M C A+ L
Sbjct: 302 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 361
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
++ + G++PD +Y IL+ G C++ Q+N A ++ M + G PD ++T L++ LC+
Sbjct: 362 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 421
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL----- 338
+L +A +L M KG + D V + ++ G C+ G+A D C + E+M N CL
Sbjct: 422 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 481
Query: 339 ------------------------------PNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
P++V++ L+ G C G ++ K ++ M
Sbjct: 482 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 541
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G SP+ +I G CN G+V+EA +L + G +P+ T+ ++V ++
Sbjct: 542 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 601
Query: 429 KLGEVLNEIVKVEIKGDTRIVEA---GIGLEDYLIG 461
+ ++++ +VK + ++ I A G L + IG
Sbjct: 602 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIG 637
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+A+ ++ +M G + YR ++ LC+ V A +L GF DT T+L+
Sbjct: 111 VAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLV 170
Query: 279 NSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+ CR+ L EA+++ +M K + C P+ V Y+ ++ G C GR +A ++ ++M GC
Sbjct: 171 LANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 230
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y L+ CD GM D A K + M +K P+ LI C GK++EA G
Sbjct: 231 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 290
Query: 398 VLEELLKAGEAPHEDTWVMIVPQIC 422
V ++LK G P T+ ++ C
Sbjct: 291 VFRKMLKHGLCPGIITFNALINGYC 315
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF +++ G + Y ++ A C NG + A K+ G D L+
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171
Query: 245 GLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
CR+ + A + E M + P++++Y+ L++ LC +L EA++L M KGC
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P Y ++ C G A K+L++M + C+PN+ +Y L+ LC +G + A
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+ G P +ALI G+C G V A +L + K P+ T+ ++ +C
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG + + L + M E G Y L+ L + + A + M+N+GFV +
Sbjct: 72 NGVVKLMGAL-DGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID 130
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y T++N+LC+ ++ A C++ G D ++VL CR +A +V E M
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190
Query: 334 -SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
C PN V+Y L+ GLC+ G + A + Q M+ KG P LIK C++G
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
D+A +L+E+ P+ T+ +++ ++C ++E+ V +++K
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 149/359 (41%), Gaps = 40/359 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ LI L + + IL ++ + + FT LI + + F +M
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470
Query: 157 LEFNCKPLPKQLNRILELLVTHRNY-LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
+E C N L+ L ++Y L A + K+G++P+ ++ I++ C G
Sbjct: 471 VENRCLTTAHTFNCFLDAL--GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 528
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ +++ + +M + G P+V +Y I++ GLC +V A +L M + G P+ +Y
Sbjct: 529 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 588
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI-----------D 324
L+ + + +L A++++ M GC P+ Y+ ++ GF AI D
Sbjct: 589 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 648
Query: 325 ACKVLEDMPSNGCLPNLVS-------------------------YRTLVGGLCDQGMFDV 359
A + + N CL + V Y LV GLC +G
Sbjct: 649 ARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIE 708
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + Q M+ G P ++S ++I+ +C K D ++ +L P ++ ++
Sbjct: 709 ADQLTQDMVKHGLFPDKAIS-SIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVI 766
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 12/301 (3%)
Query: 126 YPVTPSLFTYLIKIYAESNLPDRAL--KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y + PS+ T+ I I + AL K M + C P I+ L +
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
LF S GV PN +Y ++++A G + A+ + + M + G P+ Y L+
Sbjct: 568 AETILF-SMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626
Query: 244 QG--LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
G L + RA+ D+ + + L + + R + A K+ R ++K
Sbjct: 627 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKI--RDEIKK 684
Query: 302 CN-PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
C P YN +V+G C+EGR I+A ++ +DM +G P+ + +++ C +D
Sbjct: 685 CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNC 743
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++M+L++ F P F+ +I G N G+V EA ++ +L++ E V + P
Sbjct: 744 LEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEE---VEVTPS 800
Query: 421 I 421
I
Sbjct: 801 I 801
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 173/393 (44%), Gaps = 34/393 (8%)
Query: 63 CRVQKLIASQSDPLLAK-EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
C V K++ S+ +A F + Q + H +Y +++ LG+ K F L+ ++ +
Sbjct: 1412 CLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQM 1471
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN- 180
++ T +++ A ++ A+ F M F K +N +L+ L R+
Sbjct: 1472 VEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSV 1531
Query: 181 --------------------------------YLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
L+ A D + +HG P+ +Y ++
Sbjct: 1532 KRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLV 1591
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
A+C D Y L ++M +R P+V +Y ILM L + + A+D + + G
Sbjct: 1592 EAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVA 1651
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD Y +L+ L R +L +AY ++ M+ G P++ +NT++ C +A +A K+
Sbjct: 1652 PDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKL 1711
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L M C P++ +Y L+ C + + + M K SP FS L+ C
Sbjct: 1712 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCR 1771
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
GKV ++C LEE++ G AP ++T+ +++ ++
Sbjct: 1772 NGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKL 1804
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A D F + GV P+ YN ++ G + AY++ +M G+ P+V ++ L
Sbjct: 1636 REALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTL 1695
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ C SQ A+ LL M + PD +YT LL C+++ ++ L+C M K
Sbjct: 1696 ISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDI 1755
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+PD Y +V CR G+ +C LE+M S G P ++ ++ L + + V KK
Sbjct: 1756 SPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKK 1815
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P N ++ V + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE-A 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF--------------------- 224
+L+ G++PNT +Y+ M+ FC + A +F
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 225 --------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
++M E G++ D +Y L+ G +N A+DLL++M++ G PD
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G E
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
LI G+C G+VD+ + E+ + G + T++ ++
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 117/211 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ P+ +YN M+ FC +G S A L +M ER + PDV +Y L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y+++++ C++ +L A + M KGC+P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ +NT++ G+C R D ++L +M G + + +Y TL+ G G + A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
Q MIS G P L+ G C+ GK+ +A
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 2/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LIK + + AL TF + + P +L L + + A +LF
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE-DRVSEALNLFHQM 175
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN ++ +M C G I A L ++M E G+ P +Y ++ G+C+K
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 253 NRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++LL M +P+ + Y+ +++SLC+ + +A L M+ KG PD+ YN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++GFC GR DA ++L++M P++V+Y L+ +G F A++ M+ +G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ ++I GFC ++D A + + G +P+ T+ ++ C + ++
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 432 EVLNEIVKVEIKGDT 446
E+L+E+ + + DT
Sbjct: 416 ELLHEMTETGLVADT 430
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ A+ M+E +P I++ + + + L K
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++PN Y+ ++ + C +G S A LF +M E+G+ PD+ +Y ++ G C +
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL++ML + PD ++Y L+N+ ++ K EA +L M +G P+ + Y+++
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC++ R A + M + GC PNL+++ TL+ G C D + + M G
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + LI GF VG ++ A +L+E++ +G P T ++ +C
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL---- 182
+P+L T+ LI Y + D ++ M E N ++ H YL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI-----HGFYLVGDL 446
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RG 231
A DL + G+ P+ + + ++ C NG + A +F M + G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV++Y IL+ GL + + A +L E+M ++G VPDT++Y+++++ LC++ +L EA
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M K +P++V + T++ G+C+ GR D ++ +M G + N ++Y TL+ G
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G + A Q MIS G P ++ G + ++ A +LE+L
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + N D A F M C P N +++ + +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR-IDDG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ +T +YN ++ F GD++ A L +M G+ PD+ + L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD +Y L++ L + K EA +L
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ + M S PN+V++ TL+ G C
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + + EE+++ +L ++
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKL 677
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M +P V + LM + R + + + L + M K D S+ L+
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C KL A ++ G +PD+V + T++ G C E R +A + M C P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V++ TL+ GLC +G A + M+ G P ++ G C G A +L
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 400 EELLKAGE-APHEDTWVMIVPQIC 422
++ + P+ + I+ +C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLC 266
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL DML +P + + L+ + R ++ L +M+ K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
DI +N ++ FC + A + G P++V++ TL+ GLC + A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M P+ L+ G C G++ EA +L+ +++ G P + T+ IV +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 422 C 422
C
Sbjct: 230 C 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ L A +F S PN ++ ++ +C G + LF +M RG++ + +
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G + +N A+D+ ++M++ G PDT++ +L L K++L+ A +L +++
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Query: 299 V 299
+
Sbjct: 679 M 679
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 154/336 (45%), Gaps = 9/336 (2%)
Query: 97 TYLILI---LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
TY LI K+G+ D IL ++++ F LI + + A+K F
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVF 259
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M KP N ++ L + + A L + PN ++N ++ FC
Sbjct: 260 AEMNRQGVKPNVVTYNSLINGLCNN-GKVNEATALRDQMVNSCLKPNIITHNALLNGFCK 318
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
N + A LF+ M ++G+ P+V +Y IL+ C+ + A L ML KG PD +
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y L+ LCRK L A L+ M K D++ YN ++ C +G A ++L++M
Sbjct: 379 YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G P+ ++Y T++ G C +G A M G + + + LIKGFC K++
Sbjct: 439 RKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+A G+L E+L+ G P+ T+ +I E MEK
Sbjct: 499 DANGLLNEMLEKGLIPNRMTY-----EIVTEEMMEK 529
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K G+ PN ++NI++ FC + ++S A +F +M +GV P+V +Y L+ GLC
Sbjct: 223 ILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+VN A L + M+N P+ +++ LLN C+ K +++A +L M +G P++
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ +C++ DA + M G P++ +Y L+ GLC +G + A+ + M
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG--- 424
+K + LI CN G++ +A +L+E+ + G P + T+ ++ C
Sbjct: 403 DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNL 462
Query: 425 -------EEMEKLGEVLN-EIVKVEIKG 444
+MEK+G + N V IKG
Sbjct: 463 RAALNLRSQMEKVGRLANVATYNVLIKG 490
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 133/256 (51%)
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +F ++ GV PN +YN ++ C NG ++ A L ++M + P++ ++ L+
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
G C+ V +A +L +DM +G P+ +Y L+++ C+ + + +A+ L M KG
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+ YN ++ G CR+G A ++ +M + +L++Y L+ LC++G A +
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M KG P + +I G+C G + A + ++ K G + T+ +++ C
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Query: 424 GEEMEKLGEVLNEIVK 439
+++E +LNE+++
Sbjct: 494 KDKLEDANGLLNEMLE 509
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 156/333 (46%), Gaps = 6/333 (1%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
IL+++ + + + L+ YA++ + F+ ++ K N ++ LV
Sbjct: 80 ILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLV 139
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
F ++K + + P S+NI++ C G ++ A + M RGV +V
Sbjct: 140 KVGEIGDMEF-VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198
Query: 237 ESYRILMQGLCRKSQVNR---AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
+Y L+ G C+ ++ + A +L++M G P+ +++ L++ C+ K + A K+
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLC 352
M +G P++V YN+++ G C G+ ++ L D N CL PN++++ L+ G C
Sbjct: 259 FAEMNRQGVKPNVVTYNSLINGLCNNGK-VNEATALRDQMVNSCLKPNIITHNALLNGFC 317
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
M A + M +G +P+ + + LI +C +++A + +L G P
Sbjct: 318 KNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVS 377
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ ++ +C ++E +++E+ +K D
Sbjct: 378 TYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 3/228 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ T+ L+ + ++ + +A + F M + P N +++ N + AF
Sbjct: 304 PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDEN-MEDAFA 362
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L++ GV P+ +YN ++ C GD+ A L ++M + + D+ +Y IL+ LC
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
K ++ +A+ LL++M KG P L+Y T+++ C++ LR A L +M+ G ++
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
YN ++ GFC++ + DA +L +M G +PN ++Y + + ++G
Sbjct: 483 TYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 17/175 (9%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
STY LI L R +++ + ++H + LI +AL+
Sbjct: 377 STYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDE 436
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M KP N +++ N LR A +L K G L N +YN++++ FC
Sbjct: 437 MCRKGLKPSQLTYNTMIDGYCKEGN-LRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+ A L N+M E+G++P+ +Y I+ E+M+ KGFVPD
Sbjct: 496 KLEDANGLLNEMLEKGLIPNRMTYEIVT----------------EEMMEKGFVPD 534
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ AL F M+ + +PLP R+L ++ + + LF+ G+ P +
Sbjct: 64 NEALDLFTRMV--HSRPLPSIVDFTRLLSVIAKMKRF-DVVISLFEQMQILGISPVLYTC 120
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI+M C + A KM + G PD+ ++ L+ G C +++ A+ L + ++
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
GF P+ ++YTTL++ LC+ + L A ++ +M G P++V YN++V G C GR D
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L DM G PN++++ L+ G AK+ ++MI P ALI
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALIN 300
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G++DEA + + G P+E T+ ++ C + +E ++ E+ + +
Sbjct: 301 GLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVA 360
Query: 445 DT 446
+T
Sbjct: 361 NT 362
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 13/348 (3%)
Query: 116 DILITL--KSEHYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L + + ++P L+T ++ S+ P RA M++ +P +
Sbjct: 99 DVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSL 158
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L H N + A LF G PN +Y ++ C N ++ A +FN+M + G
Sbjct: 159 LHGF-CHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG 217
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA- 290
+ P+V +Y L+ GLC + + A LL DM+ +G P+ +++T L+++ + K+ EA
Sbjct: 218 IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277
Query: 291 --YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
YK++ +M V PD+ Y ++ G C GR +A ++ M SNG PN V+Y TL+
Sbjct: 278 ELYKVMIQMSVY---PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C + K M KG + LI+G+C VG+ D A V ++
Sbjct: 335 HGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAP 394
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLE 456
P T+ +++ +C +EK + + K E+ D IV I ++
Sbjct: 395 PDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM--DINIVTYTIIIQ 440
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 1/296 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ + N + AL F ++ +P ++ L +R +L A ++F
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNR-HLNHAVEIFNQM 213
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G+ PN +YN ++ C G S A L M +RG+ P+V ++ L+ + ++
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKI 273
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A +L + M+ PD +YT L+N LC +L EA ++ M+ G P+ V Y T+
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC+ R D K+ +M G + N ++Y L+ G C G DVA++ M S+
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA 393
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
P + L+ G C G V++A + + + K + T+ +I+ +C ++E
Sbjct: 394 PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 121/252 (48%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H A DLF LP+ + ++ + +LF +M G+ P +
Sbjct: 59 HNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLY 118
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ I+M +CR SQ RA L M+ GF PD +++T+LL+ C ++ +A L ++
Sbjct: 119 TCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQI 178
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P++V Y T++ C+ A ++ M NG PN+V+Y +LV GLC+ G +
Sbjct: 179 VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW 238
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M+ +G P+ ALI F VGK+ EA + + +++ P T+ +
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298
Query: 418 VPQICAGEEMEK 429
+ +C +++
Sbjct: 299 INGLCTYGRLDE 310
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 5/323 (1%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
FR + TY LI L + ++ + +I + + P++ TY L+ E
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN--GIRPNVVTYNSLVSGLCEIGRWSD 240
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A R M++ +P +++ V + A +L+K + V P+ +Y ++
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVK-VGKIMEAKELYKVMIQMSVYPDVFTYTALI 299
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C G + A +F M G P+ +Y L+ G C+ +V + +M KG V
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
+T++YT L+ C + A ++ +M + PDI YN ++ G C G A +
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMI 419
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M N+V+Y ++ G+C G + A + SKG P+ +I GFC
Sbjct: 420 FKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 479
Query: 389 VGKVDEACGVLEELLKAGEAPHE 411
G + EA + +++ + G P+E
Sbjct: 480 RGFIHEADALFKKMKEDGFLPNE 502
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI + + A + ++ M++ + P ++ L T+ L A +F
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY-GRLDEARQMFYLM 318
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+G PN +Y ++ FC + + +F +M ++G++ + +Y +L+QG C +
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A ++ M ++ PD +Y LL+ LC + +A + M+ + + +IV Y +
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G+ DA + + S G PN+++Y T++ G C +G A + M GF
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGF 498
Query: 373 SPHFSV 378
P+ SV
Sbjct: 499 LPNESV 504
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 8/243 (3%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y ++R N + A LF +M +P + + L+ + + + + + L E M
Sbjct: 49 NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G P + ++N +CR + A L +M G PD+V + +++ GFC R
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA + + + G PN+V+Y TL+ LC + A + M G P+ ++L
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN--EIVKV 440
+ G C +G+ +A +L +++K G P+ T+ ++ + K+G+++ E+ KV
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI------DAFVKVGKIMEAKELYKV 282
Query: 441 EIK 443
I+
Sbjct: 283 MIQ 285
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 160/328 (48%), Gaps = 19/328 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP ++TY LI + ++ L ++A F M C P ++ + + + A
Sbjct: 319 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-VPQA 377
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF----------------E 229
D+F G PN +Y ++ C G+IS A+ ++ K+
Sbjct: 378 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+ P+V +Y L+ GLC+ +V+ A +LL+ ML+ G P+ + Y L++ C+ K+
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 497
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +M G P + Y +++ ++GR A KVL M + C PN+V+Y ++
Sbjct: 498 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC G + A K + LM KG SP+ ALI G GK+D + + ++ + G +P
Sbjct: 558 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ T+ +++ +CA ++K +L E+
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 17/312 (5%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
+L D A K + ML NC + L + + AF L K + G +P+T +
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK-AFQLIKEMMRKGFVPDTST 290
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y+ ++ C + A+ LF +M GV PDV +Y IL+ C+ + +A L E+M
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ G P ++YT L+++ + K++ +A + RM GC P+ V Y +V G C+ G
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410
Query: 324 DACKVLEDMPSNG----------------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
A +V + PN+V+Y LV GLC D A + + M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ V ALI GFC GK+D A V ++ K G P T+ ++ ++ +
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530
Query: 428 EKLGEVLNEIVK 439
+ +VL++++K
Sbjct: 531 DLAMKVLSQMLK 542
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 17/322 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI +A + ++S T +T LI Y ++ +A F M
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDL----------------FKSAHKHGVLPN 200
++ C+P +++ L N + AF++ F +H + PN
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGN-ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+Y ++ C + A+ L + M G P+ Y L+ G C+ +++ A ++
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G++P +YT+L++ + + +L A K+L +M C P++V Y ++ G CR G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ A K+L M GC PN+V+Y L+ GL G D++ M KG SP++
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 381 ALIKGFCNVGKVDEACGVLEEL 402
LI C G +D+A +L E+
Sbjct: 624 VLINHLCAAGLLDKARLLLGEM 645
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + G PN Y+ ++ FC G I A +F +M + G +P V +Y L+
Sbjct: 463 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ + +++ A+ +L ML P+ ++YT +++ LCR + +A KLL M+ KGC+P
Sbjct: 523 RMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 582
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V Y ++ G + G+ + + M GC PN V+YR L+ LC G+ D A+ +
Sbjct: 583 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M + + I+GF + G+LEE+ G P + M++
Sbjct: 643 GEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 700
Query: 425 EEMEKLGEVLNEIVKV 440
+E E+ E+++V
Sbjct: 701 GRLEIAMELHKEMMEV 716
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 152/380 (40%), Gaps = 58/380 (15%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D L ++ E + + L T++I E++ D A+ M +C P +L
Sbjct: 93 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + L + G PN +N ++ ++C D + AY L N+M G P
Sbjct: 153 LKKKQ-LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 236 VESYRILMQGLCRKSQV-----------------------------------------NR 254
Y I + +C + ++ ++
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A L+++M+ KGFVPDT +Y+ ++ LC K+ +A+ L MK+ G PD+ Y ++
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
FC+ G A + E+M S GC P +V+Y L+ A M+ G P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGE----------------APHEDTWVMIV 418
+ AL+ G C G + +A V +L+ + AP+ T+ +V
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+C +++ E+L+ ++
Sbjct: 452 DGLCKAHKVDHAHELLDAML 471
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 46/293 (15%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +YN +++ G + + + + +M E G D + LC++ + A
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+D++E + F DT+ T +++ L EA L RM+ C P++V Y T++ G
Sbjct: 95 LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 316 F-----------------------------------CREGRAIDACKVLEDMPSNGCLPN 340
F C E A K+L M + GC P
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 341 LVSYRTLVGGLCDQ------GMFDVAKK-YMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
V Y +G +C Q + D+A+K Y +++ + +V++ + C VGK D
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN-FARCLCGVGKFD 270
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A +++E+++ G P T+ ++ +C ++EK + E+ V + D
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 40/336 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A ++L + S ++ LI + ++ D A + F M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +++ + L A + K PN +Y M+ C G+
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKD-GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L + M E+G P+V +Y L+ GL + +++ ++DL M KG P+ ++Y
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N LC L +A LL MK + Y + GF + I + +LE+M S G
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYG 682
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVA----KKYMQL-------------------------- 366
+P Y L+ G ++A K+ M++
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 742
Query: 367 -------MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M +GF P SV LIKG V K DEA
Sbjct: 743 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI LG+A L D+ + + +P+ TY LI + L D+A R
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRK--GCSPNYVTYRVLINHLCAAGLLDKA----R 639
Query: 155 SML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+L E PK L + + + + +G +P Y +++ F
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 699
Query: 214 NGDISIAYTLFNKMFE--RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
G + IA L +M E V D + Y L+Q LC SQV A L +M +GFVP+
Sbjct: 700 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 759
Query: 272 LSYTTLLNSLCRKKKLREAYKL 293
+ L+ L KK EA +L
Sbjct: 760 SVFVCLIKGLVEVKKWDEALQL 781
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 32/212 (15%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R++ + A D + + + G+ P ++Y L+ L ++ +++ M G D
Sbjct: 17 RRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 76
Query: 308 HYNTVVLGFCREGRAIDACKVLE--------------------------------DMPSN 335
C+EGR DA ++E M N
Sbjct: 77 TVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 136
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C+PN+V+YRTL+ G + K+ + +M+++G +P+ S+ ++L+ +CN A
Sbjct: 137 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 196
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+L + G P + + + IC E++
Sbjct: 197 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 228
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 164/349 (46%), Gaps = 9/349 (2%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LI 137
+ F++ + + H+ + L+ L + + +LI +S+ + FTY ++
Sbjct: 1646 QFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIA-ESKPSSFQANAFTYSTIV 1704
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ Y E +AL M + K N IL L H + A DL S
Sbjct: 1705 RGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKE-KEALDLLHSMATTSC 1763
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS----QVN 253
P+ +YNI++ A C G + A L M R D+ +Y L+ GLCRK +V
Sbjct: 1764 APDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVE 1823
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
RA L E+M++KG P +++YT ++++L R K +A K+L M GC D+V YN ++
Sbjct: 1824 RAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLI 1883
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
F + G A + +MP+ GC+P++V+Y ++V G C G + A K M ++G
Sbjct: 1884 NRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIF 1943
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P+ ++ G++ +A L E+ K G ++V ++ IC
Sbjct: 1944 PNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVD-AISYVALISTIC 1991
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 39/311 (12%)
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
NR+LE LV R Y R L + N +Y+ ++R +C +G+ A L M
Sbjct: 1664 FNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHM 1723
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ V + + Y I++ LC+ + A+DLL M PD +Y L+N+LC+ +L
Sbjct: 1724 KKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRL 1783
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA------------------------- 322
+A L+ M+ + C DIV YNT++ G CR+G
Sbjct: 1784 EDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVT 1843
Query: 323 ----IDAC----------KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
IDA KVL+ M NGC +LV+Y L+ GM D A M
Sbjct: 1844 YTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMP 1903
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
++G P ++++ GFC GKV+EA + E+ G P+ T+ I M+
Sbjct: 1904 TRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQ 1963
Query: 429 KLGEVLNEIVK 439
L E+ K
Sbjct: 1964 DAHAYLVEMRK 1974
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 129 TPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP+ TY + I A + ++A K M E C N ++ + A
Sbjct: 1838 TPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAK-AGMMDKAM 1896
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
DLF G +P+ +YN ++ FC G + A LF +M RG+ P+ +Y +
Sbjct: 1897 DLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDAC 1956
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ A L +M +G V D +SY L++++C+ K + ++LL M KG P++
Sbjct: 1957 LKAGRMQDAHAYLVEMRKEGLV-DAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNL 2015
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
V +N V +E DA +++++ P L
Sbjct: 2016 VTFNVVFEALSKESNTDDAKIMIQELRQQHSSPPL 2050
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 8/324 (2%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK-----PLPK--QLNRILELLVTHRNYL 182
P + ++ + + + R+ ++ CK PLP +++L + +NY
Sbjct: 27 PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY- 85
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
LF G+ + SYNI++ C IA ++ KM + G PDV + L
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C+ ++V A+DL+ M GF PD + Y T+++ C+ + +A +L RM+ G
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
D V YN++V G C GR DA +++ DM +PN++++ ++ +G F A K
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M + P ++LI G C G+VDEA +L+ ++ G P T+ ++ C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDT 446
+ +++ ++ E+ + + GDT
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDT 349
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 4/297 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL M++F +P ++ ++ N + A DL + G P+ YN ++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGF-CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C G ++ A LF++M GV D +Y L+ GLC + + A L+ DM+ + V
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ +++T +++ ++ K EA KL M + +PD+ YN+++ G C GR +A ++
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L+ M + GCLP++V+Y TL+ G C D K + M +G + +I+G+
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G+ D A + + P+ T+ +++ +C +EK + + K EI+ D
Sbjct: 362 AGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 33/369 (8%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H +Y I+I L R F + ++ + Y + LI + + N A+
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M E +P N I++ + A +LF + GV + +YN ++ C
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDG-SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
+G S A L M R ++P+V ++ ++ ++ + + A+ L E+M + PD
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L+N LC ++ EA ++L M KGC PD+V YNT++ GFC+ R + K+ +M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK-----------GFSPHFSVSHA 381
G + + ++Y T++ G G D A++ M S+ G ++ V A
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 382 L---------------------IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
L I G C +G V++A + L G P ++ ++
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 421 ICAGEEMEK 429
C + +K
Sbjct: 461 FCRKRQWDK 469
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + R M+ + P ++++ V + A L++ + V P+ +YN ++
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF-SEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G + A + + M +G +PDV +Y L+ G C+ +V+ L +M +G V
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
DT++Y T++ + + A ++ RM + P+I Y+ ++ G C R A +
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVL 403
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
E+M + ++ +Y ++ G+C G + A + + KG P +I GFC
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 389 VGKVDEACGVLEELLKAGEAP 409
+ D++ + ++ + G P
Sbjct: 464 KRQWDKSDLLYRKMQEDGLLP 484
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 8/215 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P +FTY LI D A + M+ C P N ++ + +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR-VDEG 333
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ + G++ +T +YN +++ + G A +F++M R P++ +Y IL+ G
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYG 390
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC +V +A+ L E+M D +Y +++ +C+ + +A+ L + KG PD
Sbjct: 391 LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 306 IVHYNTVVLGFCREGRAIDACKVL-EDMPSNGCLP 339
+V Y T++ GFCR+ R D +L M +G LP
Sbjct: 451 VVSYTTMISGFCRK-RQWDKSDLLYRKMQEDGLLP 484
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 49/339 (14%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY +I + S A + + MLE P N ++ V + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE-A 344
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF--------------------- 224
+L+ G++PNT +Y+ M+ FC + A +F
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 225 --------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
++M E G++ D +Y L+ G +N A+DLL++M++ G PD
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMK-----------VKGCNPDIVHYNTVVLGFCRE 319
++ TLL+ LC KL++A ++ M+ G PD+ YN ++ G E
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ ++A ++ E+MP G +P+ ++Y +++ GLC Q D A + M SK FSP+
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
LI G+C G+VD+ + E+ + G + T++ ++
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 152/315 (48%), Gaps = 2/315 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LIK + + AL TF + + P +L L + + A D F
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE-DRVSEALDFFHQM 175
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN ++ +M C G I A L ++M E G+ P +Y ++ G+C+K
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 253 NRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++LL M +P+ + Y+ +++SLC+ + +A L M+ KG PD+ YN+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+++GFC GR DA ++L++M P++V+Y L+ +G F A++ M+ +G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P+ ++I GFC ++D A + + G +P+ T+ ++ C + ++
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 432 EVLNEIVKVEIKGDT 446
E+L+E+ + + DT
Sbjct: 416 ELLHEMTETGLVADT 430
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 117/211 (55%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF + G+ P+ +YN M+ FC +G S A L +M ER + PDV +Y L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ + A +L ++ML +G +P+T++Y+++++ C++ +L A + M KGC+P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ +NT++ G+C R D ++L +M G + + +Y TL+ G G + A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
Q MIS G P L+ G C+ GK+ +A
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDA 484
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT L+ A+ M+E +P I++ + + + L K
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++PN Y+ ++ + C +G S A LF +M E+G+ PD+ +Y ++ G C +
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A LL++ML + PD ++Y L+N+ ++ K EA +L M +G P+ + Y+++
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC++ R A + M + GC PNL+++ TL+ G C D + + M G
Sbjct: 367 IDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + LI GF VG ++ A +L+E++ +G P T ++ +C
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 22/291 (7%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL---- 182
+P+L T+ LI Y + D ++ M E N ++ H YL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI-----HGFYLVGDL 446
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE-----------RG 231
A DL + G+ P+ + + ++ C NG + A +F M + G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V PDV++Y IL+ GL + + A +L E+M ++G VPDT++Y+++++ LC++ +L EA
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
++ M K +P++V + T++ G+C+ GR D ++ +M G + N ++Y TL+ G
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
G + A Q MIS G P ++ G + ++ A +LE+L
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 14/323 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+ TY +I + + N D A F M C P N +++ + +
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR-IDDG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G++ +T +YN ++ F GD++ A L +M G+ PD+ + L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLN-----------KGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
LC ++ A+++ + M G PD +Y L++ L + K EA +L
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +G PD + Y++++ G C++ R +A ++ + M S PN+V++ TL+ G C
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 594
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G D + M +G + LI GF VG ++ A + +E++ +G P T
Sbjct: 595 GRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 415 VMIVPQICAGEEMEKLGEVLNEI 437
++ + + EE+++ +L ++
Sbjct: 655 RNMLTGLWSKEELKRAVAMLEKL 677
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M +P V + LM + R + + + L + M K D S+ L+
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C KL A ++ G +PD+V + T++ G C E R +A M C P
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V++ TL+ GLC +G A + M+ G P ++ G C G A +L
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 400 EELLKAGE-APHEDTWVMIVPQIC 422
++ + P+ + I+ +C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLC 266
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A+DL DML +P + + L+ + R ++ L +M+ K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
DI +N ++ FC + A + G P++V++ TL+ GLC + A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M P+ L+ G C G++ EA +L+ +++ G P + T+ IV +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 422 C 422
C
Sbjct: 230 C 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
++ L A +F S PN ++ ++ +C G + LF +M RG++ + +
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ G + +N A+D+ ++M++ G PDT++ +L L K++L+ A +L +++
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Query: 299 V 299
+
Sbjct: 679 M 679
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ P+T ++N + C G + A LF +M PD +Y L+ G CR V
Sbjct: 241 KEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVE 300
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
AV L M G +P +Y +L LC ++E ++LL M + D V NT++
Sbjct: 301 EAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLI 360
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
+C+ G ACKV + M +G N +Y+ L+ G C D AK+ M+ GFS
Sbjct: 361 NAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFS 420
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P++SV L+ GFC D + +EL+K G P + + ++ ++C +++ V
Sbjct: 421 PNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRV 480
Query: 434 LNEIVKVEIKGDTRI 448
+++ + GD+ +
Sbjct: 481 FDQMQSKGLVGDSLV 495
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 140/309 (45%), Gaps = 1/309 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P + ++L+ + A+S P A++ F M P +L L R A +F
Sbjct: 108 PHVPSWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARAR-MTATARRVF 166
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ G+ T YN M+ GD + A + +M GV D SY ++ CRK
Sbjct: 167 DEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRK 226
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
A+ + M +G PDT+++ + ++ LC++ +++EA +L M PD V Y
Sbjct: 227 GMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTY 286
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
T++ G+CR G +A K+ M + G LP + +Y ++ LC+ G + + M
Sbjct: 287 TTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDG 346
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ + LI +C G + AC V ++++++G + T+ ++ C E++
Sbjct: 347 RKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDG 406
Query: 430 LGEVLNEIV 438
E ++V
Sbjct: 407 AKEAFFQMV 415
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 25/333 (7%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR---ILELLVTHRNYLRP 184
+PSL T ++ + S LP AL FR++ P P L+ +L LL H +
Sbjct: 30 ASPSLLTAVL--HRLSPLPSAALAFFRAL------PPPHPLDASLAVLRLLAPHPRHHTA 81
Query: 185 AFDLFKS-AHKHGVL-----------PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
A L + + +H + P+ S+ +++ A + A +F+ M RG+
Sbjct: 82 ARALLRDLSLRHPLSSPLLLPSLLAGPHVPSWLVLVLAQ--SARPHDAVRVFDHMRARGL 139
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD + L+ L R A + ++M G T Y +L+ + +A
Sbjct: 140 APDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEA 199
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
++ RM G D YNTV+ +CR+G +A + M G P+ V++ + + GLC
Sbjct: 200 IVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLC 259
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+G A + M++ +P LI G+C G V+EA + + AG P
Sbjct: 260 KEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVA 319
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ I+ ++C M+++ +L+E+ +++ D
Sbjct: 320 TYNAILRKLCEDGNMKEVHRLLHEMDGRKVQAD 352
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 12/334 (3%)
Query: 78 AKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
A+ +FD +R H + L + LK G A I + + VT F+Y
Sbjct: 162 ARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAI-----VTRMDAAGVTLDRFSY 216
Query: 136 --LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
+I +Y + A+ M + +P N + L ++ A LF
Sbjct: 217 NTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCK-EGRVKEAAQLFTEMV 275
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
P+ +Y ++ +C G++ A L +M G++P V +Y +++ LC +
Sbjct: 276 AAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMK 335
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
LL +M + D ++ TL+N+ C++ + A K+ +M G + Y ++
Sbjct: 336 EVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALI 395
Query: 314 LGFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
GFC+ R +D K M G PN + LV G C + D ++ +G
Sbjct: 396 HGFCK-ARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGL 454
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
P +V +LI+ C G VD+A V +++ G
Sbjct: 455 PPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKG 488
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+LP +YN ++R C +G++ + L ++M R V D + L+ C++ + A
Sbjct: 313 GMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSA 372
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ + M+ G + +Y L++ C+ ++L A + +M G +P+ ++ +V G
Sbjct: 373 CKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDG 432
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC++ A + +++ G P+ YR+L+ LC +G+ D A++ M SKG
Sbjct: 433 FCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGD 492
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
V L + G A L+ + K + I PQI
Sbjct: 493 SLVYATLAYTYLTKGNPTAALNTLDGMTK--------NQLYITPQI 530
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A + K + G+ N +Y ++ FC ++ A F +M + G P+
Sbjct: 366 RGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSV 425
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C+K+ + + + ++++ +G PD Y +L+ LCRK + +A ++ +M+
Sbjct: 426 FSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQ 485
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
KG D + Y T+ + +G A L+ M N
Sbjct: 486 SKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKN 522
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 168/347 (48%), Gaps = 7/347 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY I L +A ++L + P F +I ++N D A + F+ M
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK--SAHKHGVLPNTKSYNIMMRAFCFN 214
LE C P + +L+ L + N L ++ + A K G + ++N + A C +
Sbjct: 249 LERGCVPDSLTYSIMLDNL-SRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS 307
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLS 273
G +A + M E G +P++ SY ++ GLC+ V+ A L ML+ G PD +
Sbjct: 308 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 367
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+ TL++ C+ +L +A++LL MK K C PD+V YNT++ G + G A +L++M
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ GC PN+V+Y L+ G GM++ A+ M +KG P + ++ F G +
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMM 487
Query: 393 DEACGVLEELLKAGE--APHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+A GV ++L +P T+ +++ C E+ E+ +L E+
Sbjct: 488 SKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEM 534
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 130/259 (50%), Gaps = 4/259 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G PN +Y ++ C A +M G PD+ +Y
Sbjct: 26 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 85
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC ++++ A +L++++ GF P+ ++Y+TL+ CR+++L +A L+ M ++G
Sbjct: 86 LIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRG 145
Query: 302 CNPDIVHYNTVVLGFCREGRAIDA---CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
++V Y + GFC E R + C+ ++M +G +P++V+Y T + GLC G D
Sbjct: 146 SVCNLVVYIDCIFGFC-EARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLD 204
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ ++ M G P ++I G C ++D+A V + +L+ G P T+ +++
Sbjct: 205 KGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIML 264
Query: 419 PQICAGEEMEKLGEVLNEI 437
+ ++ + EVL +
Sbjct: 265 DNLSRANRLDTVDEVLEHM 283
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 3/212 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G +P+ +YN + C G + + +M G+ PDV ++ ++ GLC+ ++++
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV--KGCNPDIVHYNT 311
A + + ML +G VPD+L+Y+ +L++L R +L ++L M+ GC ++ +N
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+ CR G+ A +L M +G LPNL+SY ++ GLC G D A K + M+ G
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359
Query: 372 -FSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
P + LI GFC G++ +A +L E+
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEM 391
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 146/319 (45%), Gaps = 42/319 (13%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++ TY LI ++ P A++T + ML C+P N ++ L N + A
Sbjct: 42 APNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA-NRMDDAG 100
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLF---------------------- 224
+ + ++G PN +Y+ ++ C + A L
Sbjct: 101 LVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGF 160
Query: 225 ---------------NKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
++M E G +PDV +Y + GLC+ ++++ +++LE+M G P
Sbjct: 161 CEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPP 220
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D +++ ++++ LC+ ++ +A+++ M +GC PD + Y+ ++ R R +VL
Sbjct: 221 DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVL 280
Query: 330 EDMPS--NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
E M + GC+ + ++ +G LC G F +AK + MI G P+ + +I G C
Sbjct: 281 EHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLC 340
Query: 388 NVGKVDEACGVLEELLKAG 406
G VD+A + ++L +G
Sbjct: 341 KSGNVDDAWKLSRKMLDSG 359
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M G V +Y L+ GLC+ ++ A LL+ M + G P+ ++YT L++ LC+ ++
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+A + + RM GC PD+V YN+++ G C R DA VL+++ NG PN ++Y T
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV--GKVDEACGVLEELLK 404
LV C + D A+ ++ MI +G + V I GFC C +E+++
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+G P T+ + +C +++K E+L E+
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 213
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 6/315 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITL-KSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
T+ I L R+ F L +IL+ + +S P S + ++I +S D A K R
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS-YNFVIDGLCKSGNVDDAWKLSRK 354
Query: 156 MLEFNC-KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
ML+ C KP N ++ + L + K+ +P+ +YN ++
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G + A L +M G P+V +Y L+ G + A L ++M KG PD ++Y
Sbjct: 415 GSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITY 474
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
T+L++ + + +A + ++K K C+PD + Y ++ G+CR +L++M
Sbjct: 475 NTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEM 534
Query: 333 PSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ G + +Y L+ L + + + A Q M+ + P S+ ++L++ F G
Sbjct: 535 TARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGD 594
Query: 392 VDEACGVLEELLKAG 406
V+ A +++E+ + G
Sbjct: 595 VNSARSMVQEMNEKG 609
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
L++++ D +P+ N+ LI +A S +LI +K+++ V P + TY
Sbjct: 351 LSRKMLDSGCCKPDVIFFNT----LISGFCKAGRLSQAHQLLIEMKAKNICV-PDVVTYN 405
Query: 137 IKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
I +S +A + M CKP ++ H Y A LF
Sbjct: 406 TLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMY-EEAESLFDEMSA 464
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG--VMPDVESYRILMQGLCRKSQV 252
G P+ +YN ++ AF G +S A ++ ++ + PD +YRIL+ G CR
Sbjct: 465 KGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDT 524
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL-REAYKLLCRMKVKGCNPDIVHYNT 311
+ + LL++M +G+ D+ +Y L+ L +++ +A + +M + C P +N+
Sbjct: 525 EQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNS 584
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
+V F R G A ++++M G L + + L
Sbjct: 585 LVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEAL 620
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
YN ++ + C + A+ +F+ M ER +PDV SY IL+ G C+ ++ RA L + M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
++ VP+ +Y LN L RK ++ +A + M GC+PD++ Y+T++ GF +
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A ++ E M S GC PN V+Y L+ GLC + D A + + M+ +G P L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAP 409
+ GFCNVGK+++A V +E++ G P
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDP 655
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 182 LRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ AF +F + + +P+ SY+I++ FC ++ A L+ +M + +P+V +Y
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ GL RK ++ A + E+M+ G PD ++Y+TL++ +K +A++L M +
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC P+ V YN ++ G C+E + +A ++ M GC P+ V+Y TL+ G C+ G + A
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ M+SKG P + L+KGF GK EA
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 676
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 151/310 (48%), Gaps = 4/310 (1%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++ LI++ ES D+A + + N +P + +++ L + A L ++
Sbjct: 341 VYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKA-GRVDSALSLLET 399
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER--GVMPDVESYRILMQGLCRK 249
K G P+ ++++++ C I A M + SY L+ LC+
Sbjct: 400 MIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKA 459
Query: 250 SQVNRAVDLLEDMLN-KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+V++A + M++ + FVPD +SY+ L++ C+ +L A KL +M C P++
Sbjct: 460 KKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTT 519
Query: 309 YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI 368
YN + G R+GR DA V E+M + GC P++++Y TL+ G D A + + MI
Sbjct: 520 YNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMI 579
Query: 369 SKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
S+G P+ + L+ G C K DEA + ++++ G P T+ ++ C ++E
Sbjct: 580 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIE 639
Query: 429 KLGEVLNEIV 438
+ EV +E+V
Sbjct: 640 QAVEVFDEMV 649
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 120/225 (53%), Gaps = 8/225 (3%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP-- 184
+P + TY LI ++ + D+A + F +M+ C+P N +L L +P
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKES---KPDE 605
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF+ + G P+ +Y ++ FC G I A +F++M +G PDV +Y L++
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 665
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCN 303
G R + A L + M+++ PDT+S+ +++ L + K+L +A ++ RM+ GC+
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 725
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
PD+V YN+++ G C E R +A KV +++ P+ ++ L+
Sbjct: 726 PDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 151/318 (47%), Gaps = 9/318 (2%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF--NCKPLPKQLNRILELLVTHRNYLRP 184
P+ +T + +S ++A + R+M E + +P+ L R+L +
Sbjct: 302 PLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLL----IESGRIDK 357
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + + P++ + + +++ C G + A +L M +RG PD+ ++ +L+
Sbjct: 358 AEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLIN 417
Query: 245 GLCRKSQVNRAVDLLEDMLNK--GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKG 301
LC+ ++ A + L+ M K SY +LLNSLC+ KK+ +A+ + M +
Sbjct: 418 ELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERS 477
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y+ ++ GFC+ A K+ + M C+PN+ +Y + GL +G A+
Sbjct: 478 FVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQ 537
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M++ G SP LI GF K D+A + E ++ G P+ T+ ++ +
Sbjct: 538 GVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGL 597
Query: 422 CAGEEMEKLGEVLNEIVK 439
C + ++ E+ ++V+
Sbjct: 598 CKESKPDEAHELFRKMVE 615
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 123/321 (38%), Gaps = 70/321 (21%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A F+ + +YN ++ + D+ A +F KM +GV+P+ +Y +L+Q
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT----------------------------- 275
C + + AV +M++KGF P + Y
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232
Query: 276 ------TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
LL + + K EA KL M GC PD Y+ +VL C+ +A K+
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292
Query: 330 EDMPSNGCLP-NLVSYRTLVGGLCDQGMFDVA------------------KKYMQLMISK 370
+M P N V++ + GLC G + A ++L+I
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIES 352
Query: 371 G----------------FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G P H++I+ C G+VD A +LE ++K G P T
Sbjct: 353 GRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATH 412
Query: 415 VMIVPQICAGEEMEKLGEVLN 435
M++ ++C +++++ E L
Sbjct: 413 SMLINELCKADKIQEAQEFLQ 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 3/292 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL FR + N K N +L+ L+ HR+ L+ A +F+ GV+PN +Y +++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRD-LKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
++ C+ + A F +M ++G P Y+ + + L + + L K
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
+ + LL + + K EA KL M GC PD Y+ +VL C+ +A K+
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 329 LEDMPSNGCLP-NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+M P N V++ + GLC G + A + + M + S V LI+
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLI 350
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
G++D+A E+ P T ++ ++C ++ +L ++K
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
EA ++ + D+ YN ++ R A +V E M + G +PN +Y LV
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
C + D A ++ M+ KGF P ++ + + GK E
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGE 217
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 144/296 (48%), Gaps = 1/296 (0%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
N D AL F ML P +++L + ++Y L+K G+ NT +
Sbjct: 33 NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHY-STVLSLYKQMDSFGIPHNTYT 91
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
NI++ +FC + A+++ + + G P ++ L++GLC + ++ A+ L + M
Sbjct: 92 LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+GF PD L+Y TL+N LC+ A + L M+ + C P +V Y+T++ C++ +
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+A + DM + G PN +Y +L+ GLC G + A + MI + P + L+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
C G V +A V++ ++++ P T+ ++ C EM K V + +V+
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 38/345 (11%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + A++ RSM + NC+P + I++ L R L A
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ-LTEALS 215
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD------------ 235
LF G+ PN +Y+ ++ C G A LF M R +MPD
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275
Query: 236 -----------------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
V +Y LM G C +S++ + V++ + M+ KG VP +
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
SYTTL+N C+ + + +A L M +G PD V YNT++ G C GR DA + +M
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G +P+LV+YR L LC A ++++ P + ++ G C G++
Sbjct: 396 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 455
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ A + +L G P T+ +++ +C + + ++ E+
Sbjct: 456 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H N L AF + K G P+T ++ ++R C G I A LF+KM G PDV
Sbjct: 101 HLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVL 160
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLC+ + A+ L M + P + Y+T+++SLC+ ++L EA L M
Sbjct: 161 TYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDM 220
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
KG +P+ Y++++ G C G +A ++ M +P+ +++ TLV LC +GM
Sbjct: 221 LAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMV 280
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + +MI P ++L+ G C ++ + V + +++ G P ++ +
Sbjct: 281 VKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTL 340
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ C + M+K + E+ + + DT
Sbjct: 341 INGYCKIQIMDKAMGLFEEMSQQGLIPDT 369
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 162/345 (46%), Gaps = 7/345 (2%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
+LG A FS++ DIL K + P T + FT LI+ AL+ F M +P
Sbjct: 104 RLGFA--FSVLGDIL---KLGYQPSTAT-FTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ L N A +S + P Y+ ++ + C + ++ A +L
Sbjct: 158 DVLTYGTLINGLCKVGN-TSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSL 216
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F+ M +G+ P+ +Y L+ GLC A+ L M+++ +PD L++ TL+++LC+
Sbjct: 217 FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK 276
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ + +A+ ++ M PD+V YN+++ G C V + M GC+P+++S
Sbjct: 277 EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVIS 336
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ G C + D A + M +G P + LI G C+VG++ +A + E++
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 396
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
G+ P T+ ++ +C + + +L I + D I
Sbjct: 397 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 441
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 7/329 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P+ FTY I+ L A++ F +M+ P N +++ L ++
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAH 284
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ + + + P+ +YN +M C ++ +F+ M +G +P V SY L+ G
Sbjct: 285 Y-VVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLING 343
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +++A+ L E+M +G +PDT++Y TL++ LC +LR+A L M V G PD
Sbjct: 344 YCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPD 403
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y + C+ R +A +L+ + P++ Y ++ G+C G + A+
Sbjct: 404 LVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFS 463
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+ SKG P +I G C G + EA + E+ + G +P+ T+ +I
Sbjct: 464 KLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNN 523
Query: 426 E----MEKLGEVLNEIVKVEIKGDTRIVE 450
E ++ E+L+ +++ T +VE
Sbjct: 524 ETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 152/319 (47%), Gaps = 7/319 (2%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH--RN 180
H + P T+ L+ + + +A M++ + KP N +++ H R+
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMD---GHCLRS 313
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ ++F + + G +P+ SY ++ +C + A LF +M ++G++PD +Y
Sbjct: 314 EMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYN 373
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GLC ++ A+ L +M+ G +PD ++Y L + LC+ +L EA LL ++
Sbjct: 374 TLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 433
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+PDI Y+ V+ G CR G A + + S G P++ +Y ++ GLC QG+ A
Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 493
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K M G SP+ + + +GF + A + +E+L G + T ++V
Sbjct: 494 SKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEM 553
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+ + + ++L E V+
Sbjct: 554 LSDDGLDQSVKQILCEFVQ 572
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A LF + P+ ++ ++ + S +L+ +M G+ + +
Sbjct: 33 NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL 92
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
IL+ C +++ A +L D+L G+ P T ++TTL+ LC + K+ EA +L +M
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+G PD++ Y T++ G C+ G A + L M C P +V Y T++ LC
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A M++KG SP+ +LI G C +G EA + ++ P + T+ +V
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGD 445
+C + K V++ +++ ++K D
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPD 298
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 3/319 (0%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT-HRNYLRPAFD 187
+P +F L K YA+ A+ F M ++ P + N + ++ R + A
Sbjct: 110 SPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDI--ALT 167
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ ++ + PN + N++M AFC G + A +F KM G P + SY L+ G C
Sbjct: 168 FYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYC 227
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
K +N + L M G PD +++ TL+N CR KL EA K+ MK P+ +
Sbjct: 228 NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTI 287
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G+ + G + ++ ++M NG ++++Y L+ GLC +G A ++ +
Sbjct: 288 TYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKEL 347
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ P+ S ALI G C + A + + ++++G P+ T+ M++ C E+
Sbjct: 348 DRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDF 407
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ EV+ E+ + I D+
Sbjct: 408 DGAVEVVREMSERSIAPDS 426
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D AL +R M + P LN ++ L A ++FK G P SYN
Sbjct: 163 DIALTFYREMQRYRISPNVYTLNMVM-CAFCKWGKLEKAIEVFKKMETMGFSPTITSYNT 221
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ +C G ++ L M + GV PD ++ L+ G CR +++ A + +M
Sbjct: 222 LIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND 281
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
VP+T++Y TL+N + +L M G DI+ YN ++LG C EGR A
Sbjct: 282 VVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAA 341
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++++ +PN ++ L+ G C + + A + + MI G P++ LI F
Sbjct: 342 YLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTF 401
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
C D A V+ E+ + AP DT + ++C G
Sbjct: 402 CKNEDFDGAVEVVREMSERSIAPDSDT----LSELCRG 435
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 133/291 (45%), Gaps = 5/291 (1%)
Query: 116 DILITLKSE--HYPVTPSLFT--YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
DI +T E Y ++P+++T ++ + + ++A++ F+ M P N +
Sbjct: 163 DIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTL 222
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ ++ L L K+GV P+ ++N ++ FC G + A +F++M
Sbjct: 223 IAGYC-NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND 281
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
V+P+ +Y L+ G + L ++ML G D L+Y L+ LC + + ++A
Sbjct: 282 VVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAA 341
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L+ + + P+ ++ ++ G C + A ++ + M +GC PN +++ L+
Sbjct: 342 YLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTF 401
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
C FD A + ++ M + +P L +G GK + A + +E+
Sbjct: 402 CKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 452
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDR 148
+R S + Y + ++ K+ L I + K E +P++ +Y LI Y L +
Sbjct: 175 YRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNS 234
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
+K M + +P N ++ L A +F + V+PNT +YN ++
Sbjct: 235 GMKLKILMEKNGVRPDDVTFNTLINGFC-RGGKLHEANKIFSEMKANDVVPNTITYNTLI 293
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ G+ + L ++M G+ D+ +Y L+ GLC + + +A L++++ + V
Sbjct: 294 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 353
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P++ +++ L+ C +K A++L M GC+P+ + ++ FC+ A +V
Sbjct: 354 PNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEV 413
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
+ +M P+ + L GL G ++A K + M K P
Sbjct: 414 VREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMP 459
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R + T+ LI R + I +K+ V P+ TY LI Y++ +
Sbjct: 248 RPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND--VVPNTITYNTLINGYSQVGNSEMG 305
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ ML K N ++ L + A+ L K + ++PN+ +++ ++
Sbjct: 306 GRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAY-LVKELDRENLVPNSSTFSALIT 364
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C + A+ L+ M G P+ ++++L+ C+ + AV+++ +M + P
Sbjct: 365 GQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAP 424
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
D+ + + L L K A KL M++K P+
Sbjct: 425 DSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPE 460
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF L+KS + G PN ++ +++ FC N D A + +M ER + PD ++ L +
Sbjct: 375 AFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCR 434
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
GL + A+ L ++M K +P+ +N
Sbjct: 435 GLWLSGKEELALKLCKEMEMKHLMPEGFDKXKTIN 469
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 149/301 (49%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY +I + PD AL M + + + +++ L +R ++ A +
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR-HVDDALN 261
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +Y+ ++ C G S A L + M ER + P+V ++ L+
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + P+ ++Y +L+N C +L EA ++ M K C PD+V
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ + +D ++ DM G + N V+Y TL+ G D A+ + M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ + L+ G C GK+++A V E L K+ P T+ ++ +C ++
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 428 E 428
E
Sbjct: 502 E 502
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY I+I L R S IL + Y + L+ + N A+
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G P+ +Y ++ C
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQH-NKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G+ +A L NKM + + DV Y ++ LC+ V+ A++L +M NKG PD
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NP++V +N+++ F +EG+ I+A K+ ++M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
PN+V+Y +L+ G C D A++ LM+SK P + LI GFC KV
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+ + ++ + G + T+ ++ + + V ++V
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 13/302 (4%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKH----GVLPN 200
D A+ F M++ +P P + +++L + + FDL S + GV N
Sbjct: 47 DEAVDLFGEMVK--SRPFPSIVEFSKLLSAIAKMKK-----FDLVISFGEKMEILGVSHN 99
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+YNIM+ C +S A + KM + G P + + L+ G C ++++ AV L++
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M+ G+ PDT+++TTL++ L + K EA L+ RM VKGC PD+V Y V+ G C+ G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A +L M ++V Y T++ LC D A M +KG P
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+LI CN G+ +A +L ++L+ P+ T+ ++ ++ + ++ +E+++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 441 EI 442
I
Sbjct: 340 SI 341
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 163/348 (46%), Gaps = 5/348 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K F L+ I K E V+ +L+TY +I + AL M++
Sbjct: 71 LLSAIAKMKKFDLV--ISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK 128
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
P LN +L H N + A L + G P+T ++ ++ + S
Sbjct: 129 LGYGPSIVTLNSLLNGFC-HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L +M +G PD+ +Y ++ GLC++ + + A++LL M D + Y+T++
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+SLC+ + + +A L M KG PD+ Y++++ C GR DA ++L DM
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+V++ +L+ +G A+K MI + P+ ++LI GFC ++DEA +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++ P T+ ++ C +++ E+ ++ + + G+T
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 3/340 (0%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
KY + D + + + ++ + P +FTY LI A + MLE P
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +++ L A LF + + PN +YN ++ FC + + A +F
Sbjct: 312 TFNSLIDAF-AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + +PDV +Y L+ G C+ +V ++L DM +G V +T++YTTL++ +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
A + +M G +P+I+ YNT++ G C+ G+ A V E + + P++ +Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ G+C G + + KG P + +I GFC G +EA + ++ + G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P T+ ++ + E++ E+ GD
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF K P+ ++ ++ A + + KM GV ++ +Y I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ LCR+SQ++ A+ +L M+ G+ P ++ +LLN C ++ EA L+ +M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V + T+V G + +A +A ++E M GC P+LV+Y ++ GLC +G D+A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M + +I C VD+A + E+ G P T+ ++ +
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 286 CNYGRWSDASRLLSDMLERKI 306
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 3/310 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI +A+ A K F M++ + P N ++ H + L A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH-DRLDEA 364
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F LP+ +YN ++ FC + LF M RG++ + +Y L+ G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ S + A + + M++ G P+ ++Y TLL+ LC+ KL +A + ++ PD
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN + G C+ G+ D + + G P++++Y T++ G C +G+ + A
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G P + LI+ G + +++E+ A T+ ++ + G
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Query: 426 EMEKLGEVLN 435
+ EVL+
Sbjct: 605 LDKGFLEVLS 614
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF +M + P + + L+ + + + + + E M G + +Y ++N
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LCR+ +L A +L +M G P IV N+++ GFC R +A +++ M G P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ V++ TLV GL A ++ M+ KG P A+I G C G+ D A +L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
++ K + ++ +C ++ + LN +++ KG
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVD---DALNLFTEMDNKG 270
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 230 RGVMPDVESYRILMQGLCRKS----QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
RG+ SY + L R + +++ AVDL +M+ P + ++ LL+++ + K
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
K +M++ G + ++ YN ++ CR + A +L M G P++V+
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+L+ G C A + M+ G+ P L+ G K EA ++E ++
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
G P T+ ++ +C E + +LN++ K +I+ D I
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 42/403 (10%)
Query: 47 QQESSISNSKSPIG---SPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILI 102
Q E I+++ +G SP V +++ + S+ +LA F +A RQ F ++ + LI
Sbjct: 113 QPEPRIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLI 172
Query: 103 LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
LG+ K F L+ ++ T++ ++ F +++ YA + A++TF M F K
Sbjct: 173 EALGKIKQFKLVWSLVETMRCRGL-LSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLK 231
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAY 221
N +++ L + ++ A ++K + G +P+ K+Y ++M + D+ +
Sbjct: 232 TELSDYNWLIDTLSKSKQ-VKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVK 290
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
T++ +M + G+ PDV +Y +L+ C+ + + A+ + +M G +P Y L+N L
Sbjct: 291 TMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGL 350
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS------- 334
+++L EA K + K G ++ N VV +CR + A K++++M
Sbjct: 351 GSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNS 410
Query: 335 ----------------------------NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+GC P L +Y +VG C G D+A +
Sbjct: 411 RTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQ 470
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
M +G P + ALI G C +++EAC +E+L G P
Sbjct: 471 MGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRP 513
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ E+L N A F+ A + G + ++ ++ A + ++L M
Sbjct: 134 VAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRC 193
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
RG++ ++++++++ R +V AV+ E M G + Y L+++L + K++++
Sbjct: 194 RGLLSK-DTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKK 252
Query: 290 AYKLLCRMKVKG-CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
A + MK KG PD+ Y ++ G+ E + + ++M G P++V+Y L+
Sbjct: 253 AQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLI 312
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
C G D A K M + G P V LI G + ++DEA E+ K+G
Sbjct: 313 SAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFP 372
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
T +V C + E ++++E+ + +I ++R
Sbjct: 373 MEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSR 411
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
S Y +LI LG + K +P+ ++ Y ++ + A K
Sbjct: 339 SPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMV 398
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M E P + + IL L+ + + A+++F+ G P +Y +M+ FC
Sbjct: 399 DEMRECKIGPNSRTYDVILHYLIKSQKF-EEAYNVFQRMGMDGCEPQLNTYTMMVGMFCS 457
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
NG + +A ++ +M ERGV+P + + L+ GLC ++++ A ++ML+KG P
Sbjct: 458 NGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQL 517
Query: 274 YTTLLNSLCRKKKLREAYKLLCRM 297
++ L +L ++ A ++ ++
Sbjct: 518 FSNLKEALVEGGRISLAQEMASKL 541
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 1/350 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
Y +LI GR+ ++ +K + + +L+ ++ A F +M
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE P N +++ L A LF + G P+ +YNI++ A C G
Sbjct: 162 LERGLTPNIPTYNLLMDAF-RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A LF+KM G PD +Y L+ GL + +V A + +M+++G D ++Y +
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL +L + + +KL+ M KG +PD +NT++ + + A +V M +G
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P+L+SY L+ G A++ ++ M+ GF P ++LI G+VDEA
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
VLEE+ AG P T+ ++ + E ++ + ++ ++ DT
Sbjct: 401 AVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 157/361 (43%), Gaps = 34/361 (9%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
++ +L + +E P+ P+ LI Y N A F F C P ++++
Sbjct: 14 LETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLID 73
Query: 174 LLVTHRNYLRP----------------------------------AFDLFKSAHKHGVLP 199
+LV + R A ++F+ G P
Sbjct: 74 ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+ +Y ++ A G + A + F+ M ERG+ P++ +Y +LM + Q++ A+ L
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+M +GF P ++Y LL++LC ++ A KL +M GC+PD Y+T+V G +
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
GR +A KV +M G +LV+Y +L+ L G D K M+ M KGF P
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSF 313
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ ++ K D A V ++++G P ++ +++ + + ++L E+V+
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Query: 440 V 440
Sbjct: 374 A 374
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 159/339 (46%), Gaps = 13/339 (3%)
Query: 97 TYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY L+ LG+A + S D +L +TP++ TY L+ + + D AL
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAML------ERGLTPNIPTYNLLMDAFRKVGQLDMAL 190
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M +P N +L+ L + + A LF G P++ +Y+ ++
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSA-GRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+G + A+ +F +M +RGV D+ +Y L+ L + ++R L+++M KGF PD
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
S+ T++++L + K A ++ RM GC PD++ YN ++ + R G A A ++LE
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G +P +Y +L+ L G D A ++ M + G P + L+ G
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ A + +++ G P ++ + + + + +++
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDE 468
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P +TY L+ +S + A K FR M++ N +L L N R +
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDR-VW 295
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L K + G P+ S+N +M A A +F +M E G PD+ SY IL+
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
R +A +LE+M+ GF+P+T +Y +L++ L ++ EA+ +L M+ GC PD+
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
V YN ++ + G A ++ + M G P+ +SY + GL D A
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 6/351 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRS 155
TY ++I + R IL L S + P T S T L + A D + F
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEV-LFCE 267
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M+E NC P + ++ + A ++ +HG NT NI++ + C G
Sbjct: 268 MVENNCVPNEVTFDMLVRFFC-RGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ A+ N M G PD SY +++GLCR + A +LL +M+ K P+ +++
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T + LC+K + +A L+ +M GC+ IV YN +V GFC +GR A ++ +P
Sbjct: 387 TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP-- 444
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
C PN ++Y TL+ GLC D A + + M+ + + L+ FC G V+EA
Sbjct: 445 -CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+++++++ G P+ T+ ++ I E+ E+L+ +V I DT
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDT 554
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 169/370 (45%), Gaps = 16/370 (4%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLI--LILKLGRAKYFSLI 114
SP S R+++LIA A+ + SR + YL LI L R S
Sbjct: 36 SPASS--RLRRLIARDDLAEAARLVERSTSRG----EAPDVYLCTKLIRNLCRRGRTSDA 89
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L T + PV + L+ Y D A + SM P+P L
Sbjct: 90 ARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM------PVPPDAYTYTPL 143
Query: 175 L--VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ + R + A L + P+ +Y +++ A C + A + ++M +G
Sbjct: 144 IRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGC 203
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
P++ +Y +++ G+CR+ +V+ A +L + + GF PDT+SYTT+L LC K+ +
Sbjct: 204 TPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEV 263
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L C M C P+ V ++ +V FCR G A +VL+ M +GC N ++ +C
Sbjct: 264 LFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSIC 323
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
QG D A +++ M S G SP ++KG C G+ ++A +L E+++ P+E
Sbjct: 324 KQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEV 383
Query: 413 TWVMIVPQIC 422
T+ + +C
Sbjct: 384 TFNTFICILC 393
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y ++R C G + A +L + M R P V +Y +L++ +C+ S +A+
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L++M KG P+ ++Y ++N +CR+ ++ +A ++L R+ G PD V Y TV+ G
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C R D + +M N C+PN V++ LV C GM + A + + M G + +
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
++ + +I C G+VD+A L + G +P ++ ++ +C E E+LNE
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372
Query: 437 IVK 439
+V+
Sbjct: 373 MVR 375
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 3/313 (0%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
PV P +TY LI+ + AL ML C+P +LE + + +
Sbjct: 132 PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQ- 190
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + G PN +YN+++ C + A + N++ G PD SY +++
Sbjct: 191 AMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLK 250
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + L +M+ VP+ +++ L+ CR + A ++L RM GC
Sbjct: 251 GLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTA 310
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ N V+ C++GR DA + L +M S GC P+ +SY T++ GLC G ++ AK+ +
Sbjct: 311 NTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ K P+ + I C G +D+A ++E++ + G + T+ +V C
Sbjct: 371 NEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQ 430
Query: 425 EEMEKLGEVLNEI 437
++ E+ N +
Sbjct: 431 GRVDSALELFNSL 443
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 169/384 (44%), Gaps = 34/384 (8%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A++I + S F+ +Y ++ L AK + ++ + + + F L+
Sbjct: 226 ARQILNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+ + + +RA++ M E C N ++ + + + AF+ + +G
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINS-ICKQGRVDDAFEFLNNMGSYGC 343
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T SY +++ C G A L N+M + P+ ++ + LC+K +++A+
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403
Query: 258 LLEDM--------------LNKGFV------------------PDTLSYTTLLNSLCRKK 285
L+E M L GF P+T++YTTLL LC +
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAE 463
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+L A +LL M C ++V +N +V FC++G +A ++++ M +GC PNL+++
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFN 523
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
TL+ G+ + + A + + ++SKG S +++ +++EA + +
Sbjct: 524 TLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDM 583
Query: 406 GEAPHEDTWVMIVPQICAGEEMEK 429
G P + I+ +C E ++
Sbjct: 584 GMRPKAVMYNKILSALCKRCETDR 607
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 17/300 (5%)
Query: 78 AKEIFDYASRQ---PNFRHSNSTYLILILKLGRAKYFSLIDD-ILITLKSEHYPVTPSLF 133
AKE+ + R+ PN N+ IL K LID IL+ + Y + +
Sbjct: 366 AKELLNEMVRKNCPPNEVTFNTFICILCQK-------GLIDQAILLIEQMPEYGCSVGIV 418
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY L+ + D AL+ F S+ C+P +L L H L A +L
Sbjct: 419 TYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLC-HAERLDAAAELLAE 474
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
++ N ++N+++ FC G + A L +M E G P++ ++ L+ G+
Sbjct: 475 MMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCN 534
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
A++LL +++KG DT++Y+++++ L R+ ++ EA ++ ++ G P V YN
Sbjct: 535 SEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNK 594
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ C+ A M SN C+PN +Y L+ GL +G+ A+ + + S+G
Sbjct: 595 ILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 4/310 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++ L RA + ++L + ++ P F I I + L D+A+ M
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM 408
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
E+ C N ++ + A +LF S PNT +Y ++ C
Sbjct: 409 PEYGCSVGIVTYNALVNGFCVQ-GRVDSALELFNSLPCE---PNTITYTTLLTGLCHAER 464
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L +M + +V ++ +L+ C+K V A++L++ M+ G P+ +++ T
Sbjct: 465 LDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNT 524
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL+ + EA +LL + KG + D + Y+++V RE R +A ++ + G
Sbjct: 525 LLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P V Y ++ LC + D A + M+S P+ S LI+G G + EA
Sbjct: 585 MRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644
Query: 397 GVLEELLKAG 406
VL EL G
Sbjct: 645 YVLSELCSRG 654
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 164/365 (44%), Gaps = 15/365 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLIL--ILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFT 134
A E+ D S ++ +++ I K GR +DD L + Y +P +
Sbjct: 296 AIEVLDRMSEHGCTANTTLCNIVINSICKQGR------VDDAFEFLNNMGSYGCSPDTIS 349
Query: 135 Y--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
Y ++K + + A + M+ NC P N + +L + + A L +
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILC-QKGLIDQAILLIEQM 408
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
++G +YN ++ FC G + A LFN + P+ +Y L+ GLC ++
Sbjct: 409 PEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERL 465
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A +LL +M+ + +++ L++ C+K + EA +L+ +M GC P+++ +NT+
Sbjct: 466 DAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTL 525
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G + + +A ++L + S G + ++Y ++V L + + A + + G
Sbjct: 526 LDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGM 585
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P + + ++ C + D A ++ P+E T+V+++ + +++
Sbjct: 586 RPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARY 645
Query: 433 VLNEI 437
VL+E+
Sbjct: 646 VLSEL 650
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 88/229 (38%), Gaps = 38/229 (16%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A E+F+ +PN TY L+ L A+ ++L + P+ F L+
Sbjct: 436 ALELFNSLPCEPN----TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLV 491
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL-------------ELL--------- 175
+ + + A++ + M+E C P N +L ELL
Sbjct: 492 SFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551
Query: 176 ------------VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
++ + + A +F + G+ P YN ++ A C + A
Sbjct: 552 LDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDF 611
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
F M MP+ +Y IL++GL R+ + A +L ++ ++G + +L
Sbjct: 612 FAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSL 660
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 154/309 (49%), Gaps = 8/309 (2%)
Query: 137 IKIYAESNLPDRALKTF-RSMLEFNCK-PLPKQLNRILELLVTHRNYLRPAFDLFKSAHK 194
I +A + DRALKTF R+ + C P + N +L+ L+ N + ++ + K
Sbjct: 97 ICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALL-RENLVAAVVPVYDNMRK 155
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
GV PN +YN++++A C N + A + ++M +G PD S+ ++ LC+ +++
Sbjct: 156 AGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDE 215
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +L +M P SY ++++LC + ++RE + ++ M +G PD V Y ++V
Sbjct: 216 ARGILAEM-----TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVG 270
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
FC+ AC +L M + GC+PN+ ++ LV G D G A M+++G++P
Sbjct: 271 AFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAP 330
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ LI+G C++G + A V + K+ P T+ ++ +++ +
Sbjct: 331 STISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIW 390
Query: 435 NEIVKVEIK 443
N++ K
Sbjct: 391 NDMTNAGCK 399
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI ++++ D A+ + M CKP ++++L + A +
Sbjct: 365 PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCK-KVMFDQAEN 423
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L PNT ++N ++R+ C G A +F+ M G P+ +Y L+ GL
Sbjct: 424 LIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLF 483
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R+ A+ +L +MLN GF +SY T ++ LC+ + ++EA LL RM ++G PD
Sbjct: 484 REGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAF 543
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ +C+EG A +L M + C N+V+Y +L+ GLC Q D A Y+ M
Sbjct: 544 TFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKM 603
Query: 368 ISKGFSPHFSVSHALIKG-FCNVGKV 392
+ +G P+ + + L++G F ++G +
Sbjct: 604 LYEGICPNEATWNVLVRGIFTHLGTI 629
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 146/312 (46%), Gaps = 1/312 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
R Y ++ +A+ + IL + +E FT L+K + + AL
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDAL 317
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M+ P N ++ L H L+ A +F K LP+ ++Y+ ++
Sbjct: 318 GMWNWMVAEGWAPSTISYNVLIRGL-CHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDG 376
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
F GD+ +A +++N M G P+V Y ++ LC+K ++A +L++ M + P+
Sbjct: 377 FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPN 436
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
TL++ TL+ SLC + A + M+ GC P+ YN ++ G REG DA ++L
Sbjct: 437 TLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLT 496
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M ++G +LVSY T + GLC M A + MI +G P +A+I +C G
Sbjct: 497 EMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEG 556
Query: 391 KVDEACGVLEEL 402
V A +L +
Sbjct: 557 NVRAAAWMLGRM 568
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ G P+T SYN+++R C GD+ A +F+ M + +PDV +Y L+
Sbjct: 316 ALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLID 375
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G + ++ A+ + DM N G P+ + YT +++ LC+K +A L+ +M ++ C P
Sbjct: 376 GFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPP 435
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + +NT++ C GRA A V M GC PN +Y L+ GL +G + A + +
Sbjct: 436 NTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRML 495
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
M++ GF + I G C + + EA +L ++ G P T+ I+ C
Sbjct: 496 TEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYC 553
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 120/233 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R F + G+ P+T +Y ++ AFC ++ +A + +M G +P+V+++ +
Sbjct: 243 MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTV 302
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++G +V+ A+ + M+ +G+ P T+SY L+ LC L+ A + M
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD+ Y+T++ GF + G A + DM + GC PN+V Y +V LC + MFD A+
Sbjct: 363 CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAE 422
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
+ M + P+ + LI+ C++G+ A V + + G P++ T+
Sbjct: 423 NLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTY 475
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 136/261 (52%), Gaps = 6/261 (2%)
Query: 188 LFKSAHKHG-VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+++ H G P + YN ++ A ++ +++ M + GV P+V +Y +L++ L
Sbjct: 113 FYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKAL 172
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ +V A +L++M KG PD +S+TT++++LC+ +L EA +L M G +
Sbjct: 173 CQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS--- 229
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN VV C + R + V+++M G P+ V+Y ++VG C +A +
Sbjct: 230 --YNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILAR 287
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M+++G P+ L+KGF + GKV +A G+ ++ G AP ++ +++ +C +
Sbjct: 288 MVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGD 347
Query: 427 MEKLGEVLNEIVKVEIKGDTR 447
+++ V + + K + D R
Sbjct: 348 LKRALFVFSCMGKSDCLPDVR 368
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 1/264 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F+ LI Y ES A++ +R E ++LE L+ + Y + + ++
Sbjct: 19 VFSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK-YFKLVWGFYEE 77
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + +NI+M FC +GDI +A ++F+ + + G+ P V SY LM G R
Sbjct: 78 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGD 137
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ L ML G PD SY+ L+N LC++ K+ +A +L M VKG P+ V + T
Sbjct: 138 LDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTT 197
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C++GR A ++ + M S LP+L++Y TL+ GLC +G A + M KG
Sbjct: 198 LIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKG 257
Query: 372 FSPHFSVSHALIKGFCNVGKVDEA 395
P LI G C G +D A
Sbjct: 258 LKPDKITYTTLIDGCCKEGNLDTA 281
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+ + + ++ E G + + ILM C+ + A + + + G P +SY TL+
Sbjct: 70 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 129
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N R L E ++L M G PD+ Y+ ++ G C+E + DA ++ ++M G
Sbjct: 130 NGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLA 189
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN V++ TL+ G C +G D+A + + M+S+ P + LI G C G + +A +
Sbjct: 190 PNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDL 249
Query: 399 LEELLKAGEAPHEDTWVMIVPQIC 422
++E+ G P + T+ ++ C
Sbjct: 250 IDEMGMKGLKPDKITYTTLIDGCC 273
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 216 DISIAYTLFNKMFERGVMPD-VESYRI---------------LMQGLCRKSQVNRAVDLL 259
DI + L E G D +E YR+ +++ L +
Sbjct: 16 DIYVFSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 75
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
E++L G+ + L++ C+ +R A + + G P +V YNT++ G+ R
Sbjct: 76 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRL 135
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + ++ M ++G P++ SY L+ GLC + D A + M+ KG +P+
Sbjct: 136 GDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTF 195
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI G C G+VD A + + +L P T+ ++ +C ++++ ++++E+
Sbjct: 196 TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGM 255
Query: 440 VEIKGD 445
+K D
Sbjct: 256 KGLKPD 261
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ + PS+ +Y L+ Y D + +ML +P + ++ L +
Sbjct: 116 WGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESK-MD 174
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +LF G+ PN ++ ++ C G + +A ++ +M + ++PD+ +Y L+
Sbjct: 175 DANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLI 234
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
GLC+K + +A DL+++M KG PD ++YTTL++ C++ L A++
Sbjct: 235 YGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLIDGCCKEGNLDTAFE 283
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 135/257 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A +L K GV PN +Y+ +M +C G++ A +F+ M + V P V SY I
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC+ V+ A++LL +ML+K VP+T++Y +L++ LC+ ++ A L+ + +G
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D++ Y +++ G C+ A + M G PN +Y L+ GLC A+
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K Q ++ KG + +I G C G +DEA + ++ G P T+ +I+ +
Sbjct: 538 KLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL 597
Query: 422 CAGEEMEKLGEVLNEIV 438
+E +K ++L+E++
Sbjct: 598 FEKDENDKAEKLLHEMI 614
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 147/294 (50%), Gaps = 1/294 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ F ML P + +IL LV +++ A L K G+ P+ + +I++
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHF-PTAISLSKQMEVKGIEPDLVTLSILI 174
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G ++ ++++ K+ + G P+ LM+GLC K +V +++ + ++ +GF
Sbjct: 175 NCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQ 234
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
+ +SY TLLN LC+ + R A KLL ++ + PD+V YNT++ G C++ +A
Sbjct: 235 MNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDF 294
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M S G P++++Y TL+ G C G A + M K +P LI C
Sbjct: 295 YTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCK 354
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
GK+ EA +L + K G P+ T+ ++ C E+ ++ + +V+ E+
Sbjct: 355 EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 126/247 (51%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
R A L + P+ YN ++ C + ++ AY + +M RG+ PDV +Y L
Sbjct: 254 RCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTL 313
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C Q+ A LL +M K PD +YT L+++LC++ KL+EA LL M +G
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++V Y+T++ G+C G +A ++ M P++ SY ++ GLC D A
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMN 433
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M+ K P+ ++LI G C G++ A +++EL G+ T+ ++ +C
Sbjct: 434 LLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLC 493
Query: 423 AGEEMEK 429
+ ++K
Sbjct: 494 KNQNLDK 500
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 6/254 (2%)
Query: 190 KSAHKH------GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
KS H H G N SY ++ C G+ A L + +R PDV Y ++
Sbjct: 220 KSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTII 279
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ VN A D +M ++G PD ++Y+TL+ C +L A+ LL M +K N
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+ Y ++ C+EG+ +A +L M G PN+V+Y TL+ G C G AK+
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M+ +P + +I G C VDEA +L E+L P+ T+ ++ +C
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459
Query: 424 GEEMEKLGEVLNEI 437
+ +++ E+
Sbjct: 460 SGRITSALDLMKEL 473
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 150/291 (51%), Gaps = 3/291 (1%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+K R + + + +P N I++ L + + A+D + + G+ P+ +Y+ ++
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDK-LVNEAYDFYTEMNSRGIFPDVITYSTLI 314
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G + A++L N+M + + PDV +Y IL+ LC++ ++ A +LL M +G
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVK 374
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID-ACK 327
P+ ++Y+TL++ C ++ A ++ M NP + YN ++ G C+ G+++D A
Sbjct: 375 PNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCK-GKSVDEAMN 433
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L +M +PN V+Y +L+ GLC G A M+ + +G +L+ G C
Sbjct: 434 LLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLC 493
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+D+A + ++ + G P++ T+ ++ +C G ++ ++ I+
Sbjct: 494 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHIL 544
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 134/269 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H + +F + K G PNT +M+ C G++ + +K+ +G +
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY L+ GLC+ + A+ LL + ++ PD + Y T+++ LC+ K + EAY M
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM 298
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD++ Y+T++ GFC G+ + A +L +M P++ +Y L+ LC +G
Sbjct: 299 NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKL 358
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
AK + +M +G P+ L+ G+C VG+V A + +++ P ++ ++
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +C G+ +++ +L E++ + +T
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNT 447
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 6/287 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY ILI L + ++L + E V P++ TY L+ Y A + F
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKE--GVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
+M++ P N ++ L ++ + A +L + V+PNT +YN ++ C +
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKS-VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS 460
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G I+ A L ++ RG DV +Y L+ GLC+ +++A+ L M +G P+ +Y
Sbjct: 461 GRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
T L++ LC+ +L+ A KL + VKGC D+ YN ++ G C+EG +A + M
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMED 580
Query: 335 NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
NGC+P+ V++ ++ L ++ D A+K + MI+KG HF H
Sbjct: 581 NGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL-LHFRNFHG 626
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 15/301 (4%)
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQ 167
FSL++++ TLK+ + P ++TY I I A E L + A M + KP
Sbjct: 327 FSLLNEM--TLKN----INPDVYTYTILIDALCKEGKLKE-AKNLLGVMTKEGVKPNVVT 379
Query: 168 LNRILE--LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
+ +++ LV + A +F + + V P+ SYNIM+ C + A L
Sbjct: 380 YSTLMDGYCLVGE---VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLR 436
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
+M + V+P+ +Y L+ GLC+ ++ A+DL++++ ++G D ++YT+LL+ LC+ +
Sbjct: 437 EMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQ 496
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
L +A L +MK +G P+ Y ++ G C+ R +A K+ + + GC ++ +Y
Sbjct: 497 NLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYN 556
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
++GGLC +GM D A M G P +I+ + D+A +L E++
Sbjct: 557 VMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616
Query: 406 G 406
G
Sbjct: 617 G 617
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A +L +M +G+ PD+ + IL+ C Q+ + +L +L G+ P+T+ TTL+
Sbjct: 151 AISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMK 210
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
LC K +++++ ++ +G + V Y T++ G C+ G A K+L + P
Sbjct: 211 GLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP 270
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V Y T++ GLC + + A + M S+G P LI GFC G++ A +L
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLL 330
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
E+ P T+ +++ +C ++++ +L + K +K
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVK 374
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A + FN M P + + ++ L + A+ L + M KG PD ++ + L+N
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ ++ +L ++ G P+ + T++ G C +G + + + + G
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N VSY TL+ GLC G A K ++++ + P + + +I G C V+EA
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E+ G P T+ ++ C ++ +LNE+ I D
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDV 342
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 51/278 (18%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR------- 248
G++PN + +I++ G ++ ++++ K+ + G P+ + LM+G R
Sbjct: 6 GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65
Query: 249 -------------------------------------KSQ-------VNRAVDLLEDMLN 264
SQ V+ AV ML
Sbjct: 66 MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
P + + +L SL + K A L +M+VKG PD+V + ++ FC G+
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
+ VL + G PN + TL+ GLC +G + + ++++GF + L+
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G C +G+ A +L + P + I+ +C
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLC 283
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 5/336 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI--YAESNLPDRALKTF 153
+TY ILI L +A + T+K + P++ T I I ++ D A F
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEA--GLFPNIMTVNIMIDRLCKAQKLDEACSIF 470
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ C P + +++ L R + A+ L++ +PN Y +++ F
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGL-GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G + ++ +M RG PD+ M + + +V + L E++ +G VPD S
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ L++ L + RE YKL MK +G + D++ YNTV+ GFC+ G+ A ++LE+M
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G P +V+Y ++V GL D A + S G + + +LI GF VG++D
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
EA +LEEL++ G P+ TW ++ + EE+++
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 180/378 (47%), Gaps = 18/378 (4%)
Query: 59 IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGR----AKYFSLI 114
I C+ QKL + S L D+ P+ R T+ LI LGR +SL
Sbjct: 454 IDRLCKAQKLDEACSIFL----GLDHKVCSPDSR----TFCSLIDGLGRRGRVDDAYSLY 505
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+ +L S+ P ++T LI+ + + + K ++ M+ C P LN ++
Sbjct: 506 EKML---DSDQIP-NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDC 561
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
V + LF+ G++P+ +SY+I++ G Y LF +M E+G+
Sbjct: 562 -VFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHL 620
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y ++ G C+ +V++A LLE+M KG P ++Y ++++ L + +L EAY L
Sbjct: 621 DVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLF 680
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
K G + ++V Y++++ GF + GR +A +LE++ G PN ++ L+ L
Sbjct: 681 EEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKA 740
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
D A+ Q M + SP+ +I G C + K ++A +E+ K G P+ T+
Sbjct: 741 EEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITY 800
Query: 415 VMIVPQIC-AGEEMEKLG 431
++ + AG ME G
Sbjct: 801 TTMIAGLAKAGNVMEARG 818
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++K G P+ N M G++ LF ++ +G++PDV SY IL+ GL
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ L +M +G D L+Y T+++ C+ K+ +AY+LL MK KG P +V
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +VV G + R +A + E+ S G N+V Y +L+ G G D A ++ +
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ KG +P+ + L+ ++DEA + + +P+ T+ +++ +C +
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778
Query: 428 EKLGEVLNEIVKVEIK 443
K E+ K +K
Sbjct: 779 NKAFVFWQEMQKQGLK 794
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ AF + + K P +Y ++ A TLF++M E G +V +
Sbjct: 184 LKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTT 243
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L++ R+ +++ A+ LL++M + F D + Y ++ + K+ A+K MK +G
Sbjct: 244 LVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG 303
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD V Y T++ C+ R +A ++ E++ N +P + +Y T++ G G FD A
Sbjct: 304 LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAY 363
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ KG P + ++ GKV+EA + +E ++ AP+ T+ +++ +
Sbjct: 364 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE-MRQDAAPNLTTYNILIDML 422
Query: 422 CAGEEME 428
C E+E
Sbjct: 423 CKAGELE 429
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ R + LF + G+ + +YN ++ FC +G + AY L +M +G+ P V +Y
Sbjct: 602 FSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYG 661
Query: 241 ILMQGLCRKSQVNRA-----------VDL------------------------LEDMLNK 265
++ GL + +++ A VDL LE+++ K
Sbjct: 662 SVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 721
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P++ ++ LL++L + +++ EA MK C+P+ + Y+ ++ G C + A
Sbjct: 722 GLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKA 781
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++M G PN ++Y T++ GL G A+ + G P + +A+I+G
Sbjct: 782 FVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEG 841
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK---LGEVLNEIVK 439
+ K +A V EE G + T V+++ + + +E+ +G VL E+ K
Sbjct: 842 LSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ILI L +A + + +K + + + +I + +S D+A + M
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+P +++ L + L A+ LF+ A GV N Y+ ++ F G
Sbjct: 649 KTKGLQPTVVTYGSVVDGL-AKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I AY + ++ ++G+ P+ ++ L+ L + +++ A ++M N P+ ++Y+
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSI 767
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
++N LC +K +A+ M+ +G P+ + Y T++ G + G ++A + + ++G
Sbjct: 768 MINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASG 827
Query: 337 CLPNLVSYRTLVGGL 351
+P+ Y ++ GL
Sbjct: 828 GVPDSACYNAMIEGL 842
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 7/226 (3%)
Query: 216 DISIAYTLFNKMFERGVM----PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
D+++A+ F + ER P+V Y + + R ++ +LE+M GF
Sbjct: 112 DVNVAFQYF-RWVERKTQQAHCPEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSN 168
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
L+ S + KL+EA+ ++ M+ P Y T++ R +
Sbjct: 169 HVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQ 228
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
M G N+ + TLV +G D A + M S F+ + + I F VGK
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
VD A E+ G P + T+ ++ +C +++ E+ E+
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL 334
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 170/364 (46%), Gaps = 3/364 (0%)
Query: 82 FDYASRQPNFRHSNSTYL-ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
F++A R+ R+ +I LGR L ++ T +E Y T F+ LI Y
Sbjct: 171 FEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAY 230
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
S D A+K F +M KP N +++ A ++F ++GV P+
Sbjct: 231 GRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPD 290
Query: 201 TKSYNIMMRAFCFNGDI-SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
++N ++ A C G + A LF++M RG+ D+ +Y L+ +C+ Q++ A ++
Sbjct: 291 RITFNSLL-AVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIM 349
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+M K +P+ ++Y+T+++ + +L EA L MK D V YNT++ + +
Sbjct: 350 SEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKL 409
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
GR +A V ++M S+G + V+Y L+GG QG ++ K+ + M ++ P+
Sbjct: 410 GRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTY 469
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI + G EA V E KAG + ++ +C +E L+E+ K
Sbjct: 470 STLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTK 529
Query: 440 VEIK 443
I+
Sbjct: 530 EGIR 533
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 40/163 (24%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+ G+ + + + +K+E + P+L TY LI +Y++ L A++ FR
Sbjct: 433 TYNALLGGYGKQGKYEEVKRVFEEMKAER--IFPNLLTYSTLIDVYSKGGLYQEAMEVFR 490
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
FK A G+ + Y+ ++ A C N
Sbjct: 491 E---------------------------------FKKA---GLKADVVLYSALIDALCKN 514
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
G + A + ++M + G+ P+V +Y ++ R +D
Sbjct: 515 GLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 160/328 (48%), Gaps = 19/328 (5%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP ++TY LI + ++ L ++A F M C P ++ + + + A
Sbjct: 254 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ-VPQA 312
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF----------------E 229
D+F G PN +Y ++ C G+IS A+ ++ K+
Sbjct: 313 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 372
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
+ P+V +Y L+ GLC+ +V+ A +LL+ ML+ G P+ + Y L++ C+ K+
Sbjct: 373 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 432
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++ +M G P + Y +++ ++GR A KVL M + C PN+V+Y ++
Sbjct: 433 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 492
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC G + A K + LM KG SP+ ALI G GK+D + + ++ + G +P
Sbjct: 493 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 552
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ T+ +++ +CA ++K +L E+
Sbjct: 553 NYVTYRVLINHLCAAGLLDKARLLLGEM 580
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 17/312 (5%)
Query: 144 NLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
+L D A K + ML NC + L + + AF L K + G +P+T +
Sbjct: 167 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK-AFQLIKEMMRKGFVPDTST 225
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
Y+ ++ C + A+ LF +M GV PDV +Y IL+ C+ + +A L E+M
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ G P ++YT L+++ + K++ +A + RM GC P+ V Y +V G C+ G
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 345
Query: 324 DACKVLEDMPSNG----------------CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
A +V + PN+V+Y LV GLC D A + + M
Sbjct: 346 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ V ALI GFC GK+D A V ++ K G P T+ ++ ++ +
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 465
Query: 428 EKLGEVLNEIVK 439
+ +VL++++K
Sbjct: 466 DLAMKVLSQMLK 477
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 17/322 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ILI +A + ++S T +T LI Y ++ +A F M
Sbjct: 260 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDL----------------FKSAHKHGVLPN 200
++ C+P +++ L N + AF++ F +H + PN
Sbjct: 320 VDAGCRPNDVTYGALVDGLCKAGN-ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+Y ++ C + A+ L + M G P+ Y L+ G C+ +++ A ++
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M G++P +YT+L++ + + +L A K+L +M C P++V Y ++ G CR G
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+ A K+L M GC PN+V+Y L+ GL G D++ M KG SP++
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 558
Query: 381 ALIKGFCNVGKVDEACGVLEEL 402
LI C G +D+A +L E+
Sbjct: 559 VLINHLCAAGLLDKARLLLGEM 580
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + G PN Y+ ++ FC G I A +F +M + G +P V +Y L+
Sbjct: 398 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 457
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ + +++ A+ +L ML P+ ++YT +++ LCR + +A KLL M+ KGC+P
Sbjct: 458 RMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSP 517
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V Y ++ G + G+ + + M GC PN V+YR L+ LC G+ D A+ +
Sbjct: 518 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 577
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M + + I+GF + G+LEE+ G P + M++
Sbjct: 578 GEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 635
Query: 425 EEMEKLGEVLNEIVKV 440
+E E+ E+++V
Sbjct: 636 GRLEIAMELHKEMMEV 651
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 152/380 (40%), Gaps = 58/380 (15%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D L ++ E + + L T++I E++ D A+ M +C P +L
Sbjct: 28 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 87
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ + L + G PN +N ++ ++C D + AY L N+M G P
Sbjct: 88 LKKKQ-LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 146
Query: 236 VESYRILMQGLCRKSQV-----------------------------------------NR 254
Y I + +C + ++ ++
Sbjct: 147 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 206
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A L+++M+ KGFVPDT +Y+ ++ LC K+ +A+ L MK+ G PD+ Y ++
Sbjct: 207 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 266
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
FC+ G A + E+M S GC P +V+Y L+ A M+ G P
Sbjct: 267 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 326
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGE----------------APHEDTWVMIV 418
+ AL+ G C G + +A V +L+ + AP+ T+ +V
Sbjct: 327 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 386
Query: 419 PQICAGEEMEKLGEVLNEIV 438
+C +++ E+L+ ++
Sbjct: 387 DGLCKAHKVDHAHELLDAML 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 40/336 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +A ++L + S ++ LI + ++ D A + F M
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +++ + L A + K PN +Y M+ C G+
Sbjct: 441 TKCGYLPSVHTYTSLIDRMFKDGR-LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
A L + M E+G P+V +Y L+ GL + +++ ++DL M KG P+ ++Y
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L+N LC L +A LL MK + Y + GF + I + +LE+M S G
Sbjct: 560 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYG 617
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVA----KKYMQL-------------------------- 366
+P Y L+ G ++A K+ M++
Sbjct: 618 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEE 677
Query: 367 -------MISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M +GF P SV LIKG V K DEA
Sbjct: 678 AFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 46/262 (17%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M E G D + LC++ + A+D++E + F DT+ T +++ L
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASY 57
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGF------------------------------ 316
EA L RM+ C P++V Y T++ GF
Sbjct: 58 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117
Query: 317 -----CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ------GMFDVAKK-YM 364
C E A K+L M + GC P V Y +G +C Q + D+A+K Y
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+++ + +V++ + C VGK D+A +++E+++ G P T+ ++ +C
Sbjct: 178 EMLAANCVLNKVNVAN-FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236
Query: 425 EEMEKLGEVLNEIVKVEIKGDT 446
++EK + E+ V + D
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDV 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 11/212 (5%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY LI LG+A L D+ + + +P+ TY LI + L D+A R
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRK--GCSPNYVTYRVLINHLCAAGLLDKA----R 574
Query: 155 SML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+L E PK L + + + + +G +P Y +++ F
Sbjct: 575 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 634
Query: 214 NGDISIAYTLFNKMFE--RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
G + IA L +M E V D + Y L+Q LC SQV A L +M +GFVP+
Sbjct: 635 AGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL 694
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ L+ L KK EA +L + +G N
Sbjct: 695 SVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 161/366 (43%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + L+ +I
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F+ M E GV
Sbjct: 88 DSYGKAGIVQESVKLFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+++ + G +A FNKM G+ P ++ I++ G +V A
Sbjct: 112 ERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N R KK+ EA K MK + P +V T++ G+
Sbjct: 172 FFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
R DA ++ E+M G PN ++Y TL+ GLC+ A+ ++ M+ K +P
Sbjct: 232 SVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI G C G +D A VL+ +++ + +++ C + +K +L++
Sbjct: 292 SIFLRLISGQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + LF KM E GV ++SY +L + + R+ +
Sbjct: 73 KKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGRYM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A ML++G P ++ ++ K+ A + MK + PD++ YNT++
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYNTMI 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+ R + +A K +M P +V+ TL+ G D A + + M G
Sbjct: 193 NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMKGFGIK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT-WVMIVPQICAGEEMEKLGE 432
P+ L+ G CN K+ EA L+E++ AP +++ ++ ++ C ++ +
Sbjct: 253 PNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAAD 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E+Y
Sbjct: 313 VLQAMIRLSVP--TEAGHYGVLIENY 336
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 58/305 (19%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + + +K + T T LIK Y + D AL+ M
Sbjct: 187 TYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEM 246
Query: 157 LEFNCKPLPKQLNRIL------ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI-MMR 209
F KP + +L E + R+ L+ D + + P S + ++
Sbjct: 247 KGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKY-------IAPTDNSIFLRLIS 299
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV- 268
C G++ A + M V + Y +L++ C+ Q ++A++LL+ ++ K +
Sbjct: 300 GQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIIL 359
Query: 269 -------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG- 320
+ ++Y L+ LC + +A + L R +K D + NT++LG +EG
Sbjct: 360 RPQSTLHMEXIAYNPLIEYLCNNGRTAKA-ETLVRQLMKLGVQDSIALNTLILGHSQEGS 418
Query: 321 -------------RAIDACK---------------------VLEDMPSNGCLPNLVSYRT 346
R ID+ K L+ M NG LP+ +R+
Sbjct: 419 PDSAFELLKIMLRRKIDSAKSAYDSLVQSYLKKNEPADAKAALDSMIENGHLPDSSLFRS 478
Query: 347 LVGGL 351
++ L
Sbjct: 479 VMESL 483
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 161/366 (43%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + L+ +I
Sbjct: 28 ALQFFRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLQWDEDLWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F M E GV
Sbjct: 88 DSYGKAGIVQESVKLFHKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+++ + G +A FNKM G+ P ++ I++ G +V A
Sbjct: 112 ERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N R KK+ EA K MK + P +V + T++ G+
Sbjct: 172 FFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
R DA +++E+M G PN ++Y T + GLC+ A+ ++ M+ K +P
Sbjct: 232 AVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI G C G +D A VL+ +++ + +++ C + +K +L++
Sbjct: 292 SIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G+ + + +M+ ++ G + + LF+KM E GV ++SY +L + + R+ +
Sbjct: 73 KKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYM 132
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A ML++G P ++ ++ K+ A + MK + PD++ YNT++
Sbjct: 133 MAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYNTMI 192
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+ R + +A K +M P +V++ TL+ G D A + ++ M G
Sbjct: 193 NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEMKGFGIK 252
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT-WVMIVPQICAGEEMEKLGE 432
P+ + G CN K+ EA L+E++ AP +++ ++ ++ C ++ +
Sbjct: 253 PNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAAD 312
Query: 433 VLNEIVKVEIKGDTRIVEAGIGLEDY 458
VL ++++ + T G+ +E+Y
Sbjct: 313 VLKAMIRLSVP--TEAGHYGVLIENY 336
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 44/295 (14%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + + +K + T T LIK Y + D AL+ M
Sbjct: 187 TYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEM 246
Query: 157 LEFNCKP--------LP---------------KQL---------NRILELLVTHR---NY 181
F KP LP K++ N I L++ +
Sbjct: 247 KGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGN 306
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
L A D+ K+ + V Y +++ +C A +L +K+ E+ ++ +S
Sbjct: 307 LDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIILRPQSTSH 366
Query: 239 -----YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
Y L++ LC Q +A L+ ++ G V D + TL+ ++ A++L
Sbjct: 367 MEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLG-VQDATALNTLIRGHSQEGSPDSAFEL 425
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
L M + + + YN++V + ++ DA L+ M NG LP+ +R ++
Sbjct: 426 LKIMLRRKXDSEKSAYNSLVQCYLKKSEPADAKTALDSMIENGHLPDSSLFRLVM 480
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 19/311 (6%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P TP +T+ +++ P+ L FN L + R+ EL+ R F
Sbjct: 165 PSTPEAYTFYLQLLDAGMAPETRL--------FNV--LMRDFVRLGELVSA-----RKVF 209
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
D + + V P ++N ++ C D+ L+ +M + GV PDV +Y L++G
Sbjct: 210 DEMRRS----VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGF 265
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
CR ++ AV + +M + G P+ + +TTL+++ C++ + L M+V+G PD+
Sbjct: 266 CRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDL 325
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
V YN +V G CR A ++E+M + G P+ V+Y TL+ G C G D+A Q
Sbjct: 326 VAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQK 385
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
M K S ALI G G+ +A VL E+++A P T+ M++ C +
Sbjct: 386 MAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGD 445
Query: 427 MEKLGEVLNEI 437
++ ++L E+
Sbjct: 446 VKTGFKLLKEM 456
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 2/314 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
LF L++ + A K F M + +P N ++ + R+ L L+K
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARD-LDAVDGLYKE 245
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV P+ +Y +++ FC G + A +FN+M + GV P+ + L+ C++
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
VN +DL +DM +G +PD ++Y L+N LCR + L+ A ++ MK G PD V Y T
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G C++G+ A + + M + V+Y L+ GL G A++ ++ M+
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + +I FC G V +L+E+ G+ P T+ +I+ +C +M+
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485
Query: 432 EVLNEIVKVEIKGD 445
+L+ ++ + + D
Sbjct: 486 MLLHAMLNIGVSPD 499
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F GV PN + ++ A C G+++ L+ M RGVMPD+ +Y L+
Sbjct: 274 AVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVN 333
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLCR + A ++E+M N G PD ++YTTL++ C+ KL A + +M K +
Sbjct: 334 GLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSL 393
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y ++ G + GR +DA +VL +M P+ +Y ++ C +G K +
Sbjct: 394 DEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLL 453
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M +KG P + ++ G C +G++ A +L +L G +P + T+ +++ C
Sbjct: 454 KEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC-- 511
Query: 425 EEMEKLGEVLN 435
K G+V N
Sbjct: 512 ----KHGKVAN 518
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 45/343 (13%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A+++FD R + + + T+ LI + RA+ +D + + V P ++TY
Sbjct: 205 ARKVFDEMRR--SVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD--VGVKPDVYTYGA 260
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LIK + + + A+K F M + P +++ N + DL++
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN-VNAGMDLYQDMRVR 319
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
GV+P+ +YN ++ C ++ A ++ +M G+ PD +Y L+ G C+ +++ A
Sbjct: 320 GVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMA 379
Query: 256 VDL-----------------------------------LEDMLNKGFVPDTLSYTTLLNS 280
+D+ L +M+ PD +YT ++++
Sbjct: 380 MDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDA 439
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
CRK ++ +KLL M+ KG P +V YN ++ G C+ G+ +A +L M + G P+
Sbjct: 440 FCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPD 499
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++Y L+ G C G ++ +L SKG P F+V +LI
Sbjct: 500 DITYNILLDGQCKHGKVANSE---ELESSKGMVPDFAVYTSLI 539
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 12/223 (5%)
Query: 63 CRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
CR + L A++S + +E+ + + TY LI + + DI +
Sbjct: 336 CRARNLKAAES---IVEEM-----KNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMA 387
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
+ + +T LI +++ P A + R M+E +P +++ + +
Sbjct: 388 EKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFC-RKGDV 446
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ F L K G P +YN++M C G + A L + M GV PD +Y IL
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
+ G C+ +V + +L +KG VPD YT+L++ L +KK
Sbjct: 507 LDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISELAKKK 546
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 133/248 (53%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K GV PN +Y +M + +++ A +FN + RGV P+V SY +++ GLC+ V+
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVD 351
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
AV L ++M K P+T++Y++L++ LC+ ++ + + L+ + +G +I+ YN+++
Sbjct: 352 EAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLL 411
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C+ + A +L M G P++ +Y TLV GLC G A++ Q ++ KG+
Sbjct: 412 NGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYP 471
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ + +I G C G DEA +L ++ G P T+ ++ + + K ++
Sbjct: 472 LNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531
Query: 434 LNEIVKVE 441
L E++ E
Sbjct: 532 LREMIARE 539
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 126/241 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A L + V PN ++NI++ C G++ A ++ + M ++GV P+V +Y
Sbjct: 245 LKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTS 304
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G +VN+A + + +G P+ SY+ ++N LC+ K + EA KL M +K
Sbjct: 305 LMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN 364
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V Y++++ G C+ GR D +++++ + G N+++Y +L+ GLC D A
Sbjct: 365 MTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAI 424
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +G P S L+ G C G++ +A + ++LL G + + +++ +
Sbjct: 425 ALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGL 484
Query: 422 C 422
C
Sbjct: 485 C 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 7/295 (2%)
Query: 147 DRALKTFRSMLEFNCKPLPK-QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ +F +L N P + N+IL LV N+ + A + G+ P ++N
Sbjct: 34 DDAVSSFNHILHMNNHTPPIFEFNKILSSLVK-MNHFKIAISFSQQMELKGIQPEMFTFN 92
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
I++ F ++ A+++ K+ + G PD + L++GLC +V A++ + ++ K
Sbjct: 93 ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG---CNPDIVHYNTVVLGFCREGRA 322
F D +SY TL+N LC+ + R A +LL K++G PD++ Y ++ FC++
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLL--RKIEGLLLVRPDVIMYTAIIDSFCKDKLV 210
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
IDA + +M PN+V++ +L+ G C G A + M +P+ + L
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
I G C G+V +A VL ++K G P+ T+ ++ +E+ K V N I
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI 325
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +F + GV PN SY++M+ C N + A LF +M + + P+ +Y
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ +++ DL++++ N+G + ++Y +LLN LC+ ++ +A LL +MK +G
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ Y T+V G C+ GR DA ++ +D+ G N+ Y ++ GLC +G FD A
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
+ M G P LI K +A +L E++
Sbjct: 495 SLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 130/254 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL+ + PN ++N ++ FC G + A L N+M V P+V ++ IL+
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ +V +A +L M+ +G P+ ++YT+L++ K++ +A + + ++G P
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ Y+ ++ G C+ +A K+ ++M PN V+Y +L+ GLC G +
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ ++G + ++L+ G C +VD+A +L ++ G P T+ +V +C
Sbjct: 393 DEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452
Query: 425 EEMEKLGEVLNEIV 438
++ + +++
Sbjct: 453 GRLKDAQRIYQDLL 466
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 106/186 (56%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK H + PNT +Y+ ++ C +G IS + L +++ RG ++ +Y L+
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ QV++A+ LL M ++G PD +YTTL++ LC+ +L++A ++ + KG
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPL 472
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+I Y ++ G C+EG +A +L M NGC+P+ V+Y TL+ L A K +
Sbjct: 473 NIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLL 532
Query: 365 QLMISK 370
+ MI++
Sbjct: 533 REMIAR 538
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 126/249 (50%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ Y ++ +FC + + AY L+++M + + P+V ++ L+ G C Q+ AV
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
LL +M P+ ++ L++ LC++ ++++A +L M +G P++V Y +++ G+
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
A V + G PN+ SY ++ GLC M D A K + M K +P+
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
+LI G C G++ + +++E+ G+ + T+ ++ +C +++K +L +
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429
Query: 437 IVKVEIKGD 445
+ I+ D
Sbjct: 430 MKDEGIQPD 438
>gi|242049778|ref|XP_002462633.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
gi|241926010|gb|EER99154.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
Length = 466
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D+L+ P + L++ A S D A + F ML P ++ L
Sbjct: 134 DLLVVCHDAGIPPDACTYNILMRAAAASGSVDHARQLFDEMLRRGIAPTVVTFGTLVAAL 193
Query: 176 VTHRNYLRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VM 233
L AFD+ + ++ VLPN Y +M+ C GD+ A L +M + ++
Sbjct: 194 CDA-GQLEDAFDMKEVMVRQYDVLPNAYVYTSLMKGLCEKGDVDAALRLKEEMAGKADLV 252
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK-LREAYK 292
D Y L++ L R + V LLE+M +G V D Y +L C+ +K A+
Sbjct: 253 LDSAVYATLVRPLFRVGRKGAVVGLLEEMKGRGIVADRAVYNAMLAGFCKDEKDFGGAFA 312
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
+L M+ GC D V YNT+V G C+ GR DA +++EDMP GC P++V+YR L G+C
Sbjct: 313 VLDDMRKNGCKADAVSYNTLVAGLCKLGRWRDASELVEDMPRRGCHPDVVTYRMLFDGMC 372
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G F A + + M+ KGF+P + ++G G V
Sbjct: 373 AAGEFLEANQVLDEMVFKGFAPSKDGAQKFVEGIEREGDV 412
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 183/411 (44%), Gaps = 49/411 (11%)
Query: 74 DPLLAKEIF--DYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTP- 130
DP A +F AS P FR+S Y ++I +L A+ F ++ IL L S P
Sbjct: 20 DPAAALRLFLNPPASATP-FRYSLRCYDLIICRLAAARLFPAMESILSRLASSSSSSGPR 78
Query: 131 ---SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
L +I Y + LP A + F + F + + LN +L L+ R LR D
Sbjct: 79 PREQLLCRVISAYGRARLPAAARRAF-THPAFPGRRTARALNTLLHALLDCRAPLR---D 134
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L H G+ P+ +YNI+MRA +G + A LF++M RG+ P V ++ L+ LC
Sbjct: 135 LLVVCHDAGIPPDACTYNILMRAAAASGSVDHARQLFDEMLRRGIAPTVVTFGTLVAALC 194
Query: 248 RKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
Q+ A D+ E M+ + +P+ YT+L+ LC K + A +L
Sbjct: 195 DAGQLEDAFDMKEVMVRQYDVLPNAYVYTSLMKGLCEKGDVDAALRLKEEMAGKADLVLD 254
Query: 294 -----------------------LCRMKVKGCNPDIVHYNTVVLGFCREGRAID-ACKVL 329
L MK +G D YN ++ GFC++ + A VL
Sbjct: 255 SAVYATLVRPLFRVGRKGAVVGLLEEMKGRGIVADRAVYNAMLAGFCKDEKDFGGAFAVL 314
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+DM NGC + VSY TLV GLC G + A + ++ M +G P L G C
Sbjct: 315 DDMRKNGCKADAVSYNTLVAGLCKLGRWRDASELVEDMPRRGCHPDVVTYRMLFDGMCAA 374
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
G+ EA VL+E++ G AP +D V I ++ L VL + KV
Sbjct: 375 GEFLEANQVLDEMVFKGFAPSKDGAQKFVEGIEREGDVVLLESVLCRLAKV 425
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 128/255 (50%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L T L A F S + G++P+ Y I+++ +C G IS A L N+M ++G
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAM 433
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y ++ GLC++ + A L +M +G PD+ + T L++ C+ L+ A +L
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+MK K D+V YNT++ GF + G A ++ DM S LP +S+ LV LC +
Sbjct: 494 KKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSK 553
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + MISK P + +++IKG+C G + LE+++ G P ++
Sbjct: 554 GHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISY 613
Query: 415 VMIVPQICAGEEMEK 429
++ E M K
Sbjct: 614 NTLIYGFVKEENMSK 628
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 186/419 (44%), Gaps = 33/419 (7%)
Query: 46 QQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQ-PNFRHSNSTYLILILK 104
+Q S++ N + V+ L ++D L + D PNF+H++ + +I
Sbjct: 53 KQGNSNVRNHLIRLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHI 112
Query: 105 LGRAKYFSLID---------------DILITLKSEHYPV--TPSLFTYLIKIYAESNLPD 147
L R+ S +I+ +L S + S+F LI+ + ++
Sbjct: 113 LVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLR 172
Query: 148 RALKTFRSMLEFN-------CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
A + F + C L L RI ++ A+ +++ + GV N
Sbjct: 173 EAYEAFTLLRSKGYTVSIDACNALIGSLVRI--------GWVELAWRIYQEISRSGVGVN 224
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+ NIM+ A C +G + T +++ E+GV PD+ +Y L+ + + A +L+
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M +KGF P +Y T++N LC+ K A ++ M G +PD Y ++++ C++G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A++ + DM S +P+LV + +++ G D A Y + G P +
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI+G+C G + EA + E+L+ G A T+ I+ +C + + + ++ NE+ +
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 463
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 38/317 (11%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI+ Y + A+ ML+ C N IL L R L A LF
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLC-KRKMLGEADKLFNE 460
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ P++ + I++ C G++ A LF KM E+ + DV +Y L+ G +
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A ++ DM++K +P +S++ L+N+LC K L EA+++ M K P ++ N+
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV----------------------- 348
++ G+CR G A D LE M S G +P+ +SY TL+
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640
Query: 349 GGL--------------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
GGL C + A+ ++ MI +G +P S +LI GF + + E
Sbjct: 641 GGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700
Query: 395 ACGVLEELLKAGEAPHE 411
A +E+L+ G +P +
Sbjct: 701 AFRFHDEMLQRGFSPDD 717
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY LI Y+ L + A + +M P N ++ L H Y R A
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYER-A 314
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F + G+ P++ +Y ++ C GD +F+ M R V+PD+ + +M
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSL 374
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R +++A+ + G +PD + YT L+ CRK + EA L M +GC D
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ G C+ +A K+ +M G P+ + L+ G C G A + +
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M K + L+ GF VG +D A + +++ P ++ ++V +C+
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554
Query: 426 EMEKLGEVLNEIVKVEIK 443
+ + V +E++ IK
Sbjct: 555 HLSEAFRVWDEMISKSIK 572
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 180/404 (44%), Gaps = 49/404 (12%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTY 135
AKE+F R ++TY L+++ + ++I ++S V P L F+
Sbjct: 314 AKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSR--DVVPDLVCFSS 370
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---HRNYLRPAFDLFKSA 192
++ ++ S D+AL F S+ E P N I +L+ + + A +L
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPD----NVIYTILIQGYCRKGMISEAMNLRNEM 426
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G + +YN ++ C + A LFN+M ERG+ PD + IL+ G C+ +
Sbjct: 427 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNL 486
Query: 253 NRAVDLLE-----------------------------------DMLNKGFVPDTLSYTTL 277
A++L + DM++K +P +S++ L
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N+LC K L EA+++ M K P ++ N+++ G+CR G A D LE M S G
Sbjct: 547 VNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGF 606
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK--GFSPHFSVSHALIKGFCNVGKVDEA 395
+P+ +SY TL+ G + A ++ M K G P ++++ GFC ++ EA
Sbjct: 607 VPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEA 666
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
VL ++++ G P T+ ++ + + + + +E+++
Sbjct: 667 EAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ GV P+ +YN ++ A+ G + A+ L + M +G P V +Y ++ GLC
Sbjct: 247 FLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLC 306
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + RA ++ +ML G PD+ +Y +LL C+K E + M+ + PD+V
Sbjct: 307 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLV 366
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+++++ F R G A + G +P+ V Y L+ G C +GM A M
Sbjct: 367 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEM 426
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G + + ++ G C + EA + E+ + G P T +++ C +
Sbjct: 427 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNL 486
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ E+ ++ + IK D
Sbjct: 487 QNAMELFKKMKEKRIKLDV 505
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 5/248 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
+Y + IL G K +L + + + K + + + TY L+ + + D A + +
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M+ P P + ++ L + + +L AF ++ + P N M++ +C +
Sbjct: 530 DMVSKEILPTPISFSILVNALCS-KGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRS 588
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK--GFVPDTL 272
G+ S KM G +PD SY L+ G ++ +++A L++ M K G VPD
Sbjct: 589 GNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVF 648
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ CR+ +++EA +L +M +G NPD Y +++ GF + +A + ++M
Sbjct: 649 TYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEM 708
Query: 333 PSNGCLPN 340
G P+
Sbjct: 709 LQRGFSPD 716
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 37/416 (8%)
Query: 43 SPEQQQESSISNSKSPIGSPCRVQKLI---ASQSDPLLAKEIFDYASRQPNFRHSNSTYL 99
S + + S SP + V L S DP A F+ +R+P FRH+ +++
Sbjct: 31 STRRWNKGSAYKRLSPSVTAAHVADLFRAPVSPLDPATALAFFECVARRPGFRHTAASHA 90
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
L+ L R + + D +++++ I + A+ +++
Sbjct: 91 ALLQLLARRRAPANYDKLVLSM---------------ISCSGTAEDVREAVDAIQAIRRV 135
Query: 160 NCKPL---PKQLNRILELLVTHRNYLRPAFD-------LFKSAHKHGVLPNTKSYNIMMR 209
K L PK N L R+ LR FD L+ + G+LP+T +YN M+
Sbjct: 136 GGKRLVLSPKCYNLAL------RSLLR--FDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
A+C G ++IA+ F + E G+ D + L+ G CR S + +A LL M G
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ SYT L+ LC + +REA L+ M GC+ ++ Y ++ G C+EGR DA +L
Sbjct: 248 NEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLL 307
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
++MP G +P++ +Y ++ G C G A LM G +P ++LI G C
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG- 366
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
GK+DEA +L + G P T+ ++ C E ++ V + ++ K D
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 144/345 (41%), Gaps = 39/345 (11%)
Query: 129 TPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH-------- 178
TP++ FT LI Y ++ D AL+ +M+ NCK + ++ +L+
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444
Query: 179 ------RNYLRP--------------------AFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
N L P A ++FK G PN +Y ++
Sbjct: 445 TLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
+ + A L KM E G+ P V +Y L+QG C+K + + A L E M G PD
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 564
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y L ++LC+ + EAY L R KG V Y ++V GF + G A ++E M
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ GC +L +Y L+ LC Q + A + M G + +I GK
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
D A + E++ +G P T+ + + C +E+ ++ E+
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM 726
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 35/327 (10%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ TY +I Y + + AL+ F+ M C P ++ L+ + L A
Sbjct: 454 LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK-LHKA 512
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G+ P +Y +++ C + A+ LF M + G+ PD ++Y +L
Sbjct: 513 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 572
Query: 246 LCRKSQVNRA-------------------VD-------------LLEDMLNKGFVPDTLS 273
LC+ + A VD L+E M+N+G D +
Sbjct: 573 LCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYT 632
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y+ LL +LC++KKL EA +L +M V G +IV Y ++ +EG+ A + +M
Sbjct: 633 YSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMI 692
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
S+G P+ +Y + C G + A+ + M G +P + I G ++G +D
Sbjct: 693 SSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYID 752
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQ 420
A L+ ++ A P+ T+ +++
Sbjct: 753 RAFSTLKRMVDASCEPNCWTYWLLLKH 779
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 20/244 (8%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ S HK P+ +Y + + ++C G I A L +M GV PDV +Y I + G
Sbjct: 690 EMISSGHK----PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGC 745
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK----------------KLREA 290
++RA L+ M++ P+ +Y LL + +L
Sbjct: 746 GHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMV 805
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
++LL RM G NP +V Y++++ GFC+ R +AC +L+ M PN Y L+
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 865
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
CD +F A ++ MI GF P H LI G C+ G D A + +LL +
Sbjct: 866 CCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHN 925
Query: 411 EDTW 414
E W
Sbjct: 926 EVAW 929
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 4/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V PS++TY +I Y +S AL M + C P N ++ L + L A
Sbjct: 315 VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGK--LDEA 372
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L A G P ++ ++ +C I A + + M D+++Y +L+
Sbjct: 373 EELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV 432
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L +K ++ A + L +M G P+ ++YT++++ C+ + A ++ M+ +GC+P+
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y +++ G ++ + A ++ M +G P +++Y TL+ G C + FD A + +
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 552
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+M G +P + L C G+ +EA
Sbjct: 553 MMEQNGLTPDEQAYNVLTDALCKSGRAEEA 582
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 150/358 (41%), Gaps = 58/358 (16%)
Query: 118 LITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
LIT K + +TP + TY LI+ + + D A + F M + P + N + + L
Sbjct: 515 LIT-KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 573
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
A + + + GV+ +Y ++ F G+ A L KM G D
Sbjct: 574 CKSGR----AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 236 VESYRILMQGLCRKSQVNRAVDLLE----------------------------------- 260
+ +Y +L+Q LC++ ++N A+ +L+
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFN 689
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+M++ G P +YT ++S C+ ++ EA L+ M+ G PD+V YN + G G
Sbjct: 690 EMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMG 749
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLV----------------GGLCDQGMFDVAKKYM 364
A L+ M C PN +Y L+ G+ + ++ + +
Sbjct: 750 YIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLL 809
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ M+ G +P ++I GFC +++EAC +L+ +L +P+E+ + M++ C
Sbjct: 810 ERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCC 867
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 1/248 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A + ++G P+ +YN ++ C G + A L N RG P V ++
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTN 393
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +++ A+ + +M++ D +Y L+N L +K +L+EA + L M G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V Y +++ G+C+ G A +V + M GC PN +Y +L+ GL A
Sbjct: 454 LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M G +P LI+G C + D A + E + + G P E + ++ +
Sbjct: 514 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 573
Query: 422 CAGEEMEK 429
C E+
Sbjct: 574 CKSGRAEE 581
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 17/311 (5%)
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
+T +T L+ ++++ D A M+ CK + +L+ L + L A
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK-LNEALS 651
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ GV N +Y I++ G A +LFN+M G P +Y + + C
Sbjct: 652 ILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYC 711
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++ A L+ +M G PD ++Y +N + A+ L RM C P+
Sbjct: 712 KIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCW 771
Query: 308 HYNTVVLGFCR----EGRAIDA------------CKVLEDMPSNGCLPNLVSYRTLVGGL 351
Y ++ F + +D ++LE M +G P +V+Y +++ G
Sbjct: 772 TYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGF 831
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + A + M+ K SP+ + LIK C++ +A + ++++ G P
Sbjct: 832 CKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQL 891
Query: 412 DTWVMIVPQIC 422
+++ ++ +C
Sbjct: 892 ESYHYLIVGLC 902
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 29/276 (10%)
Query: 94 SNSTYLILI---LKLGRAKYFS-LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP--D 147
S +TY + I K+GR + LI ++ E VTP + TY I I ++ D
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEM------ERDGVTPDVVTYNIFINGCGHMGYID 752
Query: 148 RALKTFRSMLEFNCKP----LPKQLNRILELLVTHRNY-----------LRPAFDLFKSA 192
RA T + M++ +C+P L L++ + + +Y L + L +
Sbjct: 753 RAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERM 812
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
KHG+ P +Y+ ++ FC + A L + M + + P+ E Y +L++ C
Sbjct: 813 MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLF 872
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+AV + DM+ GF P SY L+ LC + A L C + N + V + +
Sbjct: 873 GKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKIL 932
Query: 313 VLGFCREGRAIDAC-KVLEDMPSNGCLPNLVSYRTL 347
G + G +D C ++L M + C + SY L
Sbjct: 933 NDGLLKAGH-VDFCSQLLAAMDNRHCRIDSESYSML 967
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI E D + F+ M E +C P + I+ L + A +LF
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRME-AINLFSEM 100
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G PN +Y +M+ A C + + ++M E+G++P V +Y L+ G C++ V
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A ++L+ M + P+ +Y L+ CRKK + A LL +M P +V YN++
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C+ G A ++L M NG +P+ +Y + LC +G + A + KG
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + ALI G+C GK+D+A +L+ +L P+ T+ ++ +C
Sbjct: 281 KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLC 330
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 146/327 (44%), Gaps = 40/327 (12%)
Query: 130 PSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P++ TY + I A E+ L + + M+E P N +++ + A
Sbjct: 107 PNIHTYTVMINAMCKETKL-EEGRRILDEMVEKGLVPSVPTYNALIDGYCK-EGMVEAAQ 164
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
++ H + PN ++YN ++ FC ++ A L +KM E + P V +Y L+ G
Sbjct: 165 EILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQ 224
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ A LL M G VPD +Y+ +++LC+K ++ EA L +K KG +
Sbjct: 225 CKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANE 284
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC-------------- 352
V Y ++ G+C+ G+ DA +L+ M + CLPN +Y L+ GLC
Sbjct: 285 VIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMES 344
Query: 353 ---------------------DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+G FD A + + M+S G+ P + A I FC G
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGN 404
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIV 418
+ EA ++ + + G P T+ +++
Sbjct: 405 IKEAEDMMSMMFERGVMPDALTYTLVI 431
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + AF +F K G N SY ++ C G + +F KM E P V +Y
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+++ L + A++L +M +G P+ +YT ++N++C++ KL E ++L M
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P + YN ++ G+C+EG A ++L+ M SN C PN +Y L+ G C +
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M+ +P ++LI G C +G +D A +L + + G P + T+ + +
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257
Query: 420 QICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+C +E+ + N + + IK + I A I
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI 291
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 1/286 (0%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA+ MLE P N ++ YL A+ L +++GV+P+ +Y++
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCK-IGYLDSAYRLLNLMNENGVVPDQWTYSVF 255
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ C G I A LFN + E+G+ + Y L+ G C+ +++ A LL+ ML +
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P++ +Y L++ LC+++K++EA L+ M KG + Y +++ +EG A +
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHR 375
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L+ M S+G P++ Y + C +G A+ M +M +G P +I +
Sbjct: 376 ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+G ++ A VL+ + G P T+ ++ + E +K V
Sbjct: 436 GLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 111/210 (52%)
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
N D++ A+++FN M ++G + SY L+ GLC +V+ +++ + M P
Sbjct: 16 LNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YT ++++L + EA L M+ +GC P+I Y ++ C+E + + ++L++M
Sbjct: 76 TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM 135
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G +P++ +Y L+ G C +GM + A++ + LM S +P+ + LI GFC V
Sbjct: 136 VEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNV 195
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A +L ++L++ P T+ ++ C
Sbjct: 196 HRAMALLSKMLESRLTPSVVTYNSLIHGQC 225
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 13/347 (3%)
Query: 82 FDYASRQPNFRHSNS------TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
D A R N + N TY + I L + + + +LK + ++T
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI Y ++ D A ML +C P N +++ L R ++ A L +S +
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK-VQEALLLMESMIQK 348
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ +Y I++ A GD A+ + ++M G PDV Y + C + + A
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
D++ M +G +PD L+YT ++++ L A+ +L RM GC+P Y+ ++
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKH 468
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+E + K +++ +PN+ + V + F+ A + + M+ G SP+
Sbjct: 469 LLKE----ELTKKYKNVALCDSIPNV--FFADVADVWKMMKFETALELFEKMLEHGCSPN 522
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ LI G C VG++ A + + + + G +P E + ++ C
Sbjct: 523 INTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 127/328 (38%), Gaps = 30/328 (9%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
Q + + TY ILI+ + + F IL + S Y ++T I +
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A M E P +++ L PAFD+ K G P+ +Y+ +
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDA-YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL 465
Query: 208 MR--------------AFC------FNGDIS---------IAYTLFNKMFERGVMPDVES 238
++ A C F D++ A LF KM E G P++ +
Sbjct: 466 IKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINT 525
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y L+ GLC+ ++ A L + M +G P Y +LLN C +A +L+ M
Sbjct: 526 YAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMM 585
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P + N + G EG A V ++ G + V+++ L+ GL G+ D
Sbjct: 586 EHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSD 645
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ + +M ++G H LI+G
Sbjct: 646 GCSELLGVMEARGCQIHPQTYRMLIEGL 673
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R ++ A D+ + GV+P+ +Y +++ A+ G ++ A+ + +MF+ G P +
Sbjct: 402 RGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHT 461
Query: 239 YRILMQGLCRKSQVNR-----------------------------AVDLLEDMLNKGFVP 269
Y L++ L ++ + A++L E ML G P
Sbjct: 462 YSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ +Y L+ LC+ +L A KL M +G +P YN+++ C G DA +++
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV 581
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
M +G LP L S L GL ++G + AK ++ G++ LI G
Sbjct: 582 GAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN 641
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
G D +L + G H T+ M++ +
Sbjct: 642 GLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 164/326 (50%), Gaps = 4/326 (1%)
Query: 115 DDILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D +L +++ PS+ F ++ Y + L D A F ML++ P N ++
Sbjct: 168 DAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILI 227
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERG 231
L+ + + A +L K G+ P+ +Y I+ + F G +S A + KM + G
Sbjct: 228 HGLIVAGS-MEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEG 286
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ PD+ +Y +L+ G C+ + A+ L D+L+ GF + + Y+ LL+SLC++ ++ EA
Sbjct: 287 LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEAL 346
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+LL M+ PD+V Y+ ++ G C++G+ A ++ ++M N PN ++ ++ GL
Sbjct: 347 QLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL 406
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C++GM A+ Y +I P ++ + +I G+ +G V+EA + + L P
Sbjct: 407 CEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEI 437
T+ ++ C ++ + +L I
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESI 492
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 153/315 (48%), Gaps = 1/315 (0%)
Query: 131 SLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK 190
+L+ +I Y + + A++ ++ + + P N ++ +R + A L +
Sbjct: 432 TLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVV-EARRLLE 490
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
S HG+ P+ +Y +M A+C G+I+ + L +M + + P V +Y ++++GLC++
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ +V LLEDM KG PD ++Y T++ C+ K +R+A++LL M + P YN
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYN 610
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G CR G DA +VL + V+Y T++ C +G A K M+ K
Sbjct: 611 VLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEK 670
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
GF A+I C ++EA +L G +P ++ + M++ + +
Sbjct: 671 GFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSV 730
Query: 431 GEVLNEIVKVEIKGD 445
E+L ++K + D
Sbjct: 731 FELLAVMIKFGLLHD 745
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 155/315 (49%), Gaps = 11/315 (3%)
Query: 130 PSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRIL-ELLVT---HRNYLR 183
P L TY + I + + AL+ R +L QLN IL +L++ R +
Sbjct: 289 PDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF-----QLNVILYSVLLSSLCKRGQVD 343
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A L + + P+ +Y+I++ C G + A L+ +M + P+ ++ ++
Sbjct: 344 EALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGIL 403
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+GLC K ++ A + ++ PD Y +++ + + EA +L R++ K
Sbjct: 404 KGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAIT 463
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P IV +N+++ GFC+ + ++A ++LE + +G P+ V+Y TL+ C++G + +
Sbjct: 464 PSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHEL 523
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M K P +IKG C K++E+ +LE++ G AP + T+ I+ C
Sbjct: 524 LLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCK 583
Query: 424 GEEMEKLGEVLNEIV 438
++M K E+L++++
Sbjct: 584 AKDMRKAFELLDDML 598
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 150/314 (47%), Gaps = 3/314 (0%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P L TY I I+ + +A++ ++ M P + IL+ L + L A
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL-CEKGMLSDA 415
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F S + P+ YNIM+ + GD+ A L+ ++ ++ + P + ++ L+ G
Sbjct: 416 RMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYG 475
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ +V A LLE + G P ++YTTL+N+ C + + + ++LL M +K P
Sbjct: 476 FCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT 535
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y V+ G C++ + ++ ++LEDM + G P+ ++Y T++ C A + +
Sbjct: 536 VVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLD 595
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ P + + LI G C G V++A VL L + + ++ C
Sbjct: 596 DMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKG 655
Query: 426 EMEKLGEVLNEIVK 439
+ ++ +V +++V+
Sbjct: 656 DAQRAVKVFHQMVE 669
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 5/277 (1%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
K L L+++L+ V R F L K ++ + P+ ++YN ++ I +
Sbjct: 80 KDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQN-LRPSIQTYNSLLYNL---RHTDIMW 135
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
++N + + G + I++ GLC +S+ AV L K F P +S+ T+++
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ A C M G PD YN ++ G G +A ++ DM G P++
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMIS-KGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
V+Y+ + G G+ A++ +Q M++ +G P LI G C +G ++EA +
Sbjct: 256 VTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRR 315
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+LL +G + + +++ +C ++++ ++L E+
Sbjct: 316 DLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
N + +TY +LI L R D +L++L+ + +T +T +IK + RA
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA 660
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+K F M+E + K + ++ L R + A F GV P+ + + +M+
Sbjct: 661 VKVFHQMVEKGFEVSIKDYSAVINRLCK-RCLINEAKYYFCIMLSDGVSPDQEIFEMMLN 719
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPD 235
AF G + + L M + G++ D
Sbjct: 720 AFHRAGHVHSVFELLAVMIKFGLLHD 745
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 164/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H T+L +I LGRA + IL+ + + ++ +I
Sbjct: 28 ALQFFRWVERSNLFEHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F+ M E GV
Sbjct: 88 DSYGKAGIVQESVKLFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+ + + G +A FNKM G+ P ++ +++ G +++ A+
Sbjct: 112 ERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N R KK+ EA K MK K P +V Y T++ G+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
+ DA +++E+M G PN ++Y TL+ GLC+ G A+ ++ M+ K +P
Sbjct: 232 SVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPKDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI C G +D A VL+ +++ + +++ C + ++ ++L++
Sbjct: 292 SIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 7/247 (2%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K G P+ +YNI++ FC G + +A + +++ + P V +Y IL++ + ++
Sbjct: 174 KRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGID 233
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A+ LL++ML++G PD +Y ++N +C++ L A++ L R+ GC + YN ++
Sbjct: 234 EAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILL 293
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
EG+ K++ DM GC PN ++Y TL+ LC G D AK +++M K +
Sbjct: 294 RDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA 353
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC----AGEEM-- 427
P LI C GKVD A L++++ G P ++ I+ +C A E +
Sbjct: 354 PDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413
Query: 428 -EKLGEV 433
EKLGEV
Sbjct: 414 FEKLGEV 420
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI + D AL+ +L+ NCKP ++E +T + A
Sbjct: 179 PDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG-IDEAMK 237
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L G+ P+ +YN+++ C G + A+ +++ + G + V +Y IL++ L
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + L+ DML KG P+ ++Y+TL+ +LCR K+ EA +L MK K PD
Sbjct: 298 NEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY 357
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ CREG+ A + L+DM S G LP+++SY +++ LC G D A + +
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
G P+ + L + G A G++ E+L G P E T+ ++ +C +
Sbjct: 418 GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLV 477
Query: 428 EKLGEVLNEIVKVE 441
++ E+L ++ + E
Sbjct: 478 DQAIELLVDMFESE 491
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 4/308 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F Y +I + +++ D A K M + +P N IL R L A
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYN-ILIGNFCGRGRLDLALR 202
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ K P +Y I++ A G I A L ++M RG+ PD +Y +++ G+C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++RA + L + G V +Y LL L + K KL+ M VKGC P+ +
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ CR+G+ +A VL+ M P+ SY L+ LC +G D+A +++ M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEE 426
IS G P ++++ C G DEA + E+L + G P+ ++ + + +G++
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442
Query: 427 MEKLGEVL 434
+ LG +L
Sbjct: 443 IRALGMIL 450
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 159/332 (47%), Gaps = 14/332 (4%)
Query: 97 TYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNLPDRAL 150
TY ILI + G + L+D++L + P +TY + + + + DRA
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEML------SRGLRPDRYTYNVVVNGMCKEGMLDRAF 271
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ + + C N +L L+ + L G PN +Y+ ++ A
Sbjct: 272 EFLSRISKNGCVAGVSTYNILLRDLLNEGKW-EYGEKLMSDMLVKGCEPNPITYSTLITA 330
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G I A + M E+ + PD SY L+ LCR+ +V+ A++ L+DM++ G +PD
Sbjct: 331 LCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD 390
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
LSY ++L SLC+ EA + ++ GC P+ YNT+ G I A ++
Sbjct: 391 ILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMIL 450
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMI-SKGFSPHFSVSHALIKGFCNV 389
+M SNG P+ ++Y +L+ LC G+ D A + + M S+ P + ++ G C V
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKV 510
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ +A VL ++ G P+E T+ +++ I
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 133/257 (51%), Gaps = 1/257 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A + + KHG P+ +YN ++ FC + A + ++M +RG PDV +Y I
Sbjct: 128 IEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNI 186
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C + +++ A+ +++ +L P ++YT L+ + + + EA KLL M +G
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD YN VV G C+EG A + L + NGC+ + +Y L+ L ++G ++ +
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K M M+ KG P+ LI C GK+DEA VL+ + + AP ++ ++ +
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366
Query: 422 CAGEEMEKLGEVLNEIV 438
C +++ E L++++
Sbjct: 367 CREGKVDLAIEFLDDMI 383
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 96 STYLILILKL---GRAKYFS-LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALK 151
STY IL+ L G+ +Y L+ D+L+ E P+T ++ LI D A
Sbjct: 287 STYNILLRDLLNEGKWEYGEKLMSDMLVK-GCEPNPIT---YSTLITALCRDGKIDEAKN 342
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
+ M E P + ++ L + A + G LP+ SYN ++ +
Sbjct: 343 VLKVMKEKALAPDGYSYDPLISALC-REGKVDLAIEFLDDMISGGHLPDILSYNSILASL 401
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C NG+ A +F K+ E G P+ SY L L RA+ ++ +ML+ G PD
Sbjct: 402 CKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDE 461
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y +L++ LCR + +A +LL M + + C P ++ YNTV+LG C+ R IDA +VL
Sbjct: 462 ITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLA 521
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
M + GCLPN +Y L+ G+ G A + L+++
Sbjct: 522 AMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVN 560
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 1/193 (0%)
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ ++ + ++ L+ M+N+G+ PD + T L+ KK+ +A +++ ++ G PD+
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
YN V+ GFC+ R A KVL+ M G P++V+Y L+G C +G D+A + M
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
++ P LI+ G +DEA +L+E+L G P T+ ++V +C
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266
Query: 427 MEKLGEVLNEIVK 439
+++ E L+ I K
Sbjct: 267 LDRAFEFLSRISK 279
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M RG PDV L++G ++ +A+ ++E +L K PD +Y +++ C+ +
Sbjct: 103 MVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME-ILEKHGKPDVFAYNAVISGFCKADR 161
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ A K+L RMK +G PD+V YN ++ FC GR A +V++ + + C P +++Y
Sbjct: 162 VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTI 221
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ QG D A K + M+S+G P + ++ G C G +D A L + K G
Sbjct: 222 LIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNG 281
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ LN C+ K E+ L M +G PD++ ++ GF + A +V+E +
Sbjct: 79 NFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEIL 138
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+G P++ +Y ++ G C D A K + M +GF P + LI FC G++
Sbjct: 139 EKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRL 197
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
D A V+++LLK P T+ +++ +++ ++L+E++ ++ D
Sbjct: 198 DLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPD 250
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 150/285 (52%), Gaps = 4/285 (1%)
Query: 127 PVTPSLFTYLIK-IYAESNLPDRALKTFRSMLEFN-CKPLPKQLNRILELLVTHRNYLRP 184
P FT LI+ ++AE+ + D A+ F+ ++ N C+P ++ L + + +
Sbjct: 139 PYNEVTFTTLIRGLFAENKVKD-AVHLFKKLVRENICEPNEVMYGTVMNGLCK-KGHTQK 196
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AFDL + + PNT++Y I++ AFC +G + A +L N+M ++ + PD+ +Y L+
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ SQ L +M++ P+ ++ ++++ LC++ K+ +A +++ M KG +P
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ YN ++ G+ G+ A ++ + M + P+++SY L+ G Q D A +
Sbjct: 317 DVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVC 376
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ + KG P + L+ G +G+ A +E+L AG P
Sbjct: 377 REISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 40/367 (10%)
Query: 81 IFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIY 140
+ + S +PN R TY I+I + +L +K + P P +FTY
Sbjct: 203 LMEQGSTKPNTR----TYTIVIDAFCKDGMLDGATSLLNEMKQKSIP--PDIFTY----- 251
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
++++ CK + R L L + H N + PN
Sbjct: 252 -------------STLIDALCKLSQWENVRTLFLEMIHLN----------------IYPN 282
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++N ++ C G + A + M E+GV PDV +Y +++ G + QV+RA ++ +
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFD 342
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M+NK PD +SY L+N R+KK+ EA ++ + KG P IV N ++ G G
Sbjct: 343 SMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELG 402
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
R A ++M S G +P+L ++ TL+GG G+ + A + + + + +
Sbjct: 403 RTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
A+I G C GK+D+A E+L G P T+ ++ C +++ ++L ++
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522
Query: 441 EIKGDTR 447
D R
Sbjct: 523 GCLADNR 529
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 148/302 (49%), Gaps = 6/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A FR M+ KPLP +++L+ +V H + LF+ HK + +
Sbjct: 54 DDAFSLFRQMVR--TKPLPSVASFSKLLKAMV-HMKHYSSVVSLFREIHKLRIPVHEFIL 110
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ + C + +++ F++G+ + ++ L++GL +++V AV L + ++
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170
Query: 265 KGFV-PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
+ P+ + Y T++N LC+K ++A+ LL M+ P+ Y V+ FC++G
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A +L +M P++ +Y TL+ LC ++ + MI P+ +++I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G C GKV++A ++ +++ G P T+ MI+ ++++ E+ + ++ I+
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 444 GD 445
D
Sbjct: 351 PD 352
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 6/290 (2%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM-PDV 236
HR L F + K G+ N ++ ++R + A LF K+ + P+
Sbjct: 121 HRTDL--GFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNE 178
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +M GLC+K +A DLL M P+T +YT ++++ C+ L A LL
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE 238
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
MK K PDI Y+T++ C+ + + + +M PN+ ++ +++ GLC +G
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
+ A++ M+ MI KG P + +I G+ G+VD A + + ++ P ++ +
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLED-YLIGKTRS 465
++ +++++ +V EI + +K IV + L + +G+T+S
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLK--PSIVTCNVLLHGLFELGRTKS 406
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 121/280 (43%), Gaps = 8/280 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF LF+ + LP+ S++ +++A S +LF ++ + + I
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA---YKLLCRMK 298
++ C + + +L KG + +++TTL+ L + K+++A +K L R
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
+ C P+ V Y TV+ G C++G A +L M PN +Y ++ C GM D
Sbjct: 173 I--CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M K P LI C + + + + E++ P+ T+ ++
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGIGL 455
+C ++E E++ +++ + D ++ G GL
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGL 330
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 180/363 (49%), Gaps = 7/363 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
L F +AS+QP +RHS Y ++ + + F + +L ++ ++ +T LF
Sbjct: 122 LGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIV 181
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI+ +A + L ++A++ M ++ C+P +L+ L + + ++ A LF+
Sbjct: 182 LIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGS-VKQAASLFEDMRVR 240
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
P+ + + ++ +C G + A + +M E G PD+ + L+ ++ A
Sbjct: 241 -FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDA 299
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
DLL++M+ KG P+ SYT ++ + C ++K+ EA ++ M+ GC D+V Y ++ G
Sbjct: 300 FDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISG 359
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ G+ ++L+ M G +PN ++Y ++ + + + ++ M G P
Sbjct: 360 FCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPD 419
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV----PQICAGEEMEKLG 431
S+ + +I+ C +G+V + + E+ + +P DT+V+++ Q C E E
Sbjct: 420 LSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFK 479
Query: 432 EVL 434
E++
Sbjct: 480 EMI 482
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDL K + G PN SY IM++AFC + A +F +M G DV +Y
Sbjct: 296 MTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTA 355
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ ++NR +L+ M KG +P+ L+Y +L + +K++L E +L+ M++ G
Sbjct: 356 LISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVG 415
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD+ YN V+ C+ G ++ +M ++ P L ++ ++ G QG A
Sbjct: 416 CVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEAC 475
Query: 362 KYMQLMISKGF--SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+Y + MI +G +P + + L+ K+ A V ++ G + D W + +
Sbjct: 476 EYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWIH 535
Query: 420 QI 421
+
Sbjct: 536 SL 537
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 125/255 (49%), Gaps = 3/255 (1%)
Query: 185 AFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRIL 242
+ F A K G + ++Y M++ F + L +M + V+ E + +L
Sbjct: 123 GYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVL 182
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++ V +A+++L++M G PD + LL++LC+ +++A L M+V+
Sbjct: 183 IRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVR-F 241
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+P + H+ +++ G+CREG+ I+A VL M G P++V + L+ G A
Sbjct: 242 SPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFD 301
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++ M+ KG P+ + +I+ FC+ K+DEA V E+ + G T+ ++ C
Sbjct: 302 LLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFC 361
Query: 423 AGEEMEKLGEVLNEI 437
++ + ++L+ +
Sbjct: 362 KWGKINRGYQILDAM 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS-YTTLLNSLCRKKKLRE 289
G E+Y+ +++ + Q LLE+M V T + L+ + + +
Sbjct: 135 GYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRRFASARLVEK 194
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A ++L M GC PD + ++ C+ G A + EDM P+L + +L+
Sbjct: 195 AIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFS-PSLRHFTSLLY 253
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G C +G AK + M GF P V + L+ + GK+ +A +L+E+++ G P
Sbjct: 254 GWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEP 313
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +++ +++ C+ E+M++ V E+ + + D
Sbjct: 314 NANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADV 350
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G +P+ YN+++R C G++ ++N+M P+++++ I++ G + + A
Sbjct: 415 GCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEA 474
Query: 256 VDLLEDMLNKGFV--PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
+ ++M+ +G + P LLN+L R +KL A + + KGC + + +
Sbjct: 475 CEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWI 534
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
G +AC DM +P ++ L+ GL
Sbjct: 535 HSLFSNGHVKEACSYCLDMMEADIMPKPETFAKLMRGL 572
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 133/258 (51%), Gaps = 2/258 (0%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N ++ A +L + HG PN Y+ ++ FC G + A +F KM ERG P++ +Y
Sbjct: 630 NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTY 689
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ L + ++++ + +L ML P+ + YT +++ LC+ K EAYKL+ +M+
Sbjct: 690 SSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEE 749
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KGCNP++V Y ++ GF + G+ ++ DM S GC PN ++YR L+ C G+ D
Sbjct: 750 KGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDE 809
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A K + M + H +I+GF + + G+L+EL + P + + +++
Sbjct: 810 AYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILID 867
Query: 420 QICAGEEMEKLGEVLNEI 437
+E ++L EI
Sbjct: 868 NYIKAGRLEVALDLLEEI 885
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 181/376 (48%), Gaps = 43/376 (11%)
Query: 91 FRHSNSTYLILILKLGRA----KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESN 144
F +STY +I L A K FSL +++ + + PS++TY LI + ++
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEM------KRNGIVPSVYTYTILIDSFCKAG 509
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP-----AFDLFKSAHKHGVLP 199
L +A K F ML C P N + + H YL+ A +LF+ G P
Sbjct: 510 LIQQARKWFDEMLHKGCTP-----NVVTYTALIHA-YLKAKQMPVADELFEMMLLEGCKP 563
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM------------------PDVESYRI 241
N +Y ++ C G I A ++ +M RG + P+V +Y
Sbjct: 564 NVVTYTALIDGHCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGA 621
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ ++V A +LL+ ML G P+ + Y +++ C+ KL++A ++ +M +G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+P++ Y++ + ++ R KVL M N C PN+V Y +V GLC G D A
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K M M KG +P+ A+I GF GK+++ + ++ G AP+ T+ +++
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801
Query: 422 CAGEEMEKLGEVLNEI 437
C+ +++ ++L+E+
Sbjct: 802 CSNGLLDEAYKLLDEM 817
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 11/370 (2%)
Query: 79 KEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+E FD +F Y ++ L A F DIL ++S P++ TY I
Sbjct: 263 REAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSS--SCIPNVVTYRIL 320
Query: 139 IYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
+ R + M+ C P + N ++ R+Y A+ LFK K G
Sbjct: 321 LSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDY-SYAYKLFKKMIKCG 379
Query: 197 VLPNTKSYNIMMRAFCFNGD------ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
P YNI + + C N + + + +++M + GV+ + + + LC
Sbjct: 380 CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 439
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ ++A ++ +M+ KGFVPD +Y+ ++ LC K+ +A+ L MK G P + Y
Sbjct: 440 KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 499
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FC+ G A K ++M GC PN+V+Y L+ VA + ++M+ +
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P+ ALI G C G++++AC + + E+ D + + C G +
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619
Query: 431 GEVLNEIVKV 440
G +++ + K
Sbjct: 620 GALVDGLCKA 629
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 56/399 (14%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY IL+ R IL + +E +F LI Y +S A K F+ M
Sbjct: 316 TYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKM 375
Query: 157 LEFNCKP--------------------------LPKQLNRILELLVTHR-----NYLR-- 183
++ C+P + K + +L+L V N+ R
Sbjct: 376 IKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL 435
Query: 184 -------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
AF + G +P+ +Y+ ++ C + A++LF +M G++P V
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSV 495
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y IL+ C+ + +A ++ML+KG P+ ++YT L+++ + K++ A +L
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM---------------PSNGCL-PN 340
M ++GC P++V Y ++ G C+ G+ AC++ M N C PN
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPN 615
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+++Y LV GLC A + + M++ G P+ V A+I GFC +GK+ +A V
Sbjct: 616 VITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
++ + G +P+ T+ + + ++ + +VL+++++
Sbjct: 676 KMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++R C NG ++A ++ + G P +Y L+Q R +++ A + +ML+
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
FV D + + SLC+ K REA+ L+ + + PD V YN +V G C +
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLI--DEAEDFVPDTVFYNRMVSGLCEASLFEE 297
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M S+ C+PN+V+YR L+ G +G K+ + +MI++G P+ + ++LI
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE----------------EME 428
+C A + ++++K G P + + + +C+ E EM
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEML 417
Query: 429 KLGEVLNEI 437
LG VLN++
Sbjct: 418 DLGVVLNKV 426
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 139/354 (39%), Gaps = 44/354 (12%)
Query: 126 YPVTPSLFTYLIKIYA-ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
Y TP +F L+ + N DR F ++ + L ++L L +
Sbjct: 135 YSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNM 194
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + G P+ +YN +++ F + AY + +M + D +
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 254
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ + A DL+++ + FVPDT+ Y +++ LC EA +L RM+ C P
Sbjct: 255 SLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V Y ++ G R+G+ ++L M + GC PN + +L+ C + A K
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372
Query: 365 QLMISKGFSPHFSVSHALI----------------------------------------- 383
+ MI G P + V + I
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ C GK D+A ++ E++ G P + T+ ++ +C ++EK + E+
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEM 486
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 116/306 (37%), Gaps = 77/306 (25%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+P+L+TY I + N D LK MLE +C P
Sbjct: 683 SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTP----------------------- 719
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
N Y M+ C G AY L KM E+G P+V +Y ++ G
Sbjct: 720 -------------NVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGF 766
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ + ++L DM +KG P+ ++Y L+N C L EAYKLL MK I
Sbjct: 767 GKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHI 826
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA------ 360
+ + ++ GF +E I + +L+++ N +P YR L+ G +VA
Sbjct: 827 LSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEE 884
Query: 361 ----------KKYMQL---------------------MISKGFSPHFSVSHALIKGFCNV 389
KY+ MISK P S+ LIKG V
Sbjct: 885 ISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKV 944
Query: 390 GKVDEA 395
K EA
Sbjct: 945 DKWQEA 950
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 164/341 (48%), Gaps = 12/341 (3%)
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNL-PDRALKTFRSMLEFN--CKPLPKQLN 169
L + IL P TP F L + +A S PD A++ F S+ + + LP N
Sbjct: 109 LTNSILALFPRLRLPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRSHRVVQDLP-LFN 167
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+L+ L R+ + A L ++ + P+ +YN + +C D S A L +M E
Sbjct: 168 SLLDALGKSRHASKAA-SLVRALERR-FPPDVVTYNTLADGWCRAKDTSRALDLLRQMAE 225
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-----PDTLSYTTLLNSLCRK 284
GV P +Y I+++G R Q+ A + M +G PD +SYTT+++ L
Sbjct: 226 SGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVA 285
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
+L +A KL M +GC P + YN ++ C++G DA V +DM +PN+V+Y
Sbjct: 286 GQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTY 345
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC G D A K M+ M +G P + LI+ G++++A + E + K
Sbjct: 346 TVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSK 405
Query: 405 AGEA-PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+ P++DT+ +I+ + + E + ++++ +G
Sbjct: 406 GEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERG 446
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 88/232 (37%), Gaps = 45/232 (19%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLK---SEHYPVTPSLFTYLIKIYA--ESNLPDR 148
+ +TY I++ RA + + +K ++ P + +Y I+ + D+
Sbjct: 231 TKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDK 290
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A K F M + C P N +++++ N + A +F + +PN +Y +++
Sbjct: 291 ARKLFDEMSKEGCTPSVATYNALIQVICKKGN-VEDAVTVFDDMVRKDYMPNVVTYTVLI 349
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM----------QGLC----------- 247
R C G I A L +M G P V++Y +L+ + LC
Sbjct: 350 RGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGEDC 409
Query: 248 ------------------RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + A ++ +M+ +G++P +LN L
Sbjct: 410 LPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGL 461
>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 4/335 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY +I+ + ++A++ ++ L C P ++EL+ + R A D
Sbjct: 203 PDVITYNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSAR-AMD 261
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ + G P+ +YN ++ C G++ + + G+ + +Y L+ LC
Sbjct: 262 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLC 321
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ ++L M + P ++Y L+N LC+ + L A +M + C PDIV
Sbjct: 322 SNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 381
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ +EG DA ++L + S CLP L++Y +++ GL +G+ A + M
Sbjct: 382 TYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHM 441
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G SP +LI GFC V+EA VL+E G T+ +++ +C EM
Sbjct: 442 LDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREM 501
Query: 428 EKLGEVLNEIVKVEIKGDTRIVEAGI-GLEDYLIG 461
E EV+ ++ K D I A + G+E+ +G
Sbjct: 502 EMAIEVVEIMLTSGCKPDETIYTAIVKGVEEMGMG 536
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 141 AESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
E PD + T+ S++ +NC+ R L + + HG+ N
Sbjct: 268 VEGCYPD--IVTYNSLVNYNCR----------------RGNLEEVALVIQHILSHGLELN 309
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
T +YN ++ + C N + N M++ P V +Y IL+ GLC+ ++RA+D
Sbjct: 310 TVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 369
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
ML + +PD ++Y TLL ++ ++ + +A +LL +K C P ++ YN+V+ G R+G
Sbjct: 370 QMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKG 429
Query: 321 RAIDACKVLEDMPSNG---------------CLPNLV--------------------SYR 345
A ++ M G C NLV +YR
Sbjct: 430 LMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYR 489
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
++ GLC + ++A + +++M++ G P ++ A++KG +G EA
Sbjct: 490 LVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGVEEMGMGSEA 539
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
+C L + L RI + L A + + G +P+T +YN+++ C G I
Sbjct: 137 SCSNLVRGLARI--------DQLDKAMVILRIMVMSGGVPDTITYNMIIGNLCKKGHIRS 188
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A L M G PDV +Y +++ + +A+ +D L G P ++YT L+
Sbjct: 189 ALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVE 248
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
+CR A +L M V+GC PDIV YN++V CR G + V++ + S+G
Sbjct: 249 LVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLEL 308
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N V+Y TL+ LC +D ++ + +M + P + LI G C + A
Sbjct: 309 NTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 368
Query: 400 EELLK 404
++L+
Sbjct: 369 YQMLE 373
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 41/261 (15%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
+ ++ N ++ C NG ++ A L M +P S L++GL R Q+++A+ +L
Sbjct: 99 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVIL 158
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV------- 312
M+ G VPDT++Y ++ +LC+K +R A LL M + G PD++ YNTV
Sbjct: 159 RIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDH 218
Query: 313 -------------------------------VLGFCREGRAIDACKVLEDMPSNGCLPNL 341
V +C RA+D VLEDM GC P++
Sbjct: 219 GNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMD---VLEDMAVEGCYPDI 275
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y +LV C +G + +Q ++S G + + L+ C+ DE +L
Sbjct: 276 VTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNI 335
Query: 402 LLKAGEAPHEDTWVMIVPQIC 422
+ + P T+ +++ +C
Sbjct: 336 MYQTSYCPTVITYNILINGLC 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 140/321 (43%), Gaps = 5/321 (1%)
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
H+P +L L +I + D+A+ R M+ P N I+ L + ++R
Sbjct: 134 HFPSCSNLVRGLARI----DQLDKAMVILRIMVMSGGVPDTITYNMIIGNLCK-KGHIRS 188
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + G P+ +YN ++R +G+ A + G P + +Y +L++
Sbjct: 189 ALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVE 248
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+CR RA+D+LEDM +G PD ++Y +L+N CR+ L E ++ + G
Sbjct: 249 LVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLEL 308
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V YNT++ C + ++L M P +++Y L+ GLC + A +
Sbjct: 309 NTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 368
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ + P + L+ G VD+A +L L P T+ ++ +
Sbjct: 369 YQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARK 428
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
M+K E+ + ++ I D
Sbjct: 429 GLMKKALELYHHMLDAGISPD 449
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY L+ L +Y+ +++IL + Y T + LI ++ L RA+ F M
Sbjct: 312 TYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM 371
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
LE C P N +L + + + A +L LP +YN ++ G
Sbjct: 372 LEQKCLPDIVTYNTLLGAM-SKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGL 430
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
+ A L++ M + G+ PD + R L+ G CR + V A +L++ N+G +Y
Sbjct: 431 MKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTYRL 490
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
++ LC+K+++ A +++ M GC PD Y +V G G +A ++
Sbjct: 491 VIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGVEEMGMGSEAVQL 542
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%)
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
D E+ ++ LC ++ A L+E M VP S + L+ L R +L +A +L
Sbjct: 99 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVIL 158
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M + G PD + YN ++ C++G A +LEDM +G P++++Y T++ + D
Sbjct: 159 RIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDH 218
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G + A ++ + + G P+ L++ C A VLE++ G P T+
Sbjct: 219 GNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTY 278
Query: 415 VMIVPQICAGEEMEKLGEVLNEIV 438
+V C +E++ V+ I+
Sbjct: 279 NSLVNYNCRRGNLEEVALVIQHIL 302
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 162/333 (48%), Gaps = 4/333 (1%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRA-KYFSLIDDILITLKSEHYPVTPSLFTYLIK 138
+ F +A+++ N++H STY+ LI L +Y + I ++S VTP + +I+
Sbjct: 108 QFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIR 167
Query: 139 IYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG-V 197
+ + + +A+ F + C+P + N ++ +L+ H +L+ G
Sbjct: 168 MLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLI-HEGQYEKVHELYNEMSNEGHC 226
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+T +Y+ ++ AFC G A L N+M E G+ P + Y +++ + V+ A+
Sbjct: 227 HPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALS 286
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E+M PD +YT L+ L + ++ EAY M+ + C PD V N ++
Sbjct: 287 LFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLG 346
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD-QGMFDVAKKYMQLMISKGFSPHF 376
+ GR D K+ E+M + C+PN+V+Y T++ L + + + + M G SP
Sbjct: 347 KAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSP 406
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LI GFC ++++A +LEE+ + G P
Sbjct: 407 FTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPP 439
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 155/344 (45%), Gaps = 15/344 (4%)
Query: 108 AKYFSLIDDILITLKSEHYPVT-----------PSLFTY--LIKIYAESNLPDRALKTFR 154
AK +++I + L + H ++ P +FTY LI+ ++ D A +
Sbjct: 265 AKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA-FCF 213
M +CKP +N ++ L L LF+ +PN +YN +++A F
Sbjct: 325 EMQREDCKPDTVVMNNMINFL-GKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES 383
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+S ++ F +M G+ P +Y IL+ G C+ +++ +A+ LLE+M KGF P +
Sbjct: 384 KSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA 443
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y +L+++L + K+ A +L +K + Y ++ + GR DA + ++M
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
GC PN+ +Y L+ GL M D A M+ M G P + + ++ G G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
A +L + + P ++ ++ + E+ E++ E+
Sbjct: 564 RAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 141/333 (42%), Gaps = 38/333 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI LG+A ++ E + +I ++ D LK F M
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+C P N I++ L ++ + F F+ G+ P+ +Y+I++ FC
Sbjct: 362 GVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNR 421
Query: 217 ISIAYTLFNKMFERGVMP-----------------------------------DVESYRI 241
I A L +M E+G P Y +
Sbjct: 422 IEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAV 481
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++ L + +++ A++L ++M G P+ +Y L++ L R L EA + +M+ G
Sbjct: 482 MIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHG 541
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PDI YN ++ G + G A ++L +M ++ P+ VSY T++ L GMF+ A
Sbjct: 542 CLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAA 601
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
+ M+ M + GF ++++ +GKVD+
Sbjct: 602 ELMKEMNALGFEYDLITYSSILEA---IGKVDQ 631
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRS 155
+ Y LI LG+AK + L ++ LK + ++ +IK ++ D A+ F
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M + C P N ++ L L A + +HG LP+ SYNI++ G
Sbjct: 502 MSKLGCTPNVYAYNALMSGL-ARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
A + M + PD SY ++ L A +L+++M GF D ++Y+
Sbjct: 561 GPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYS 620
Query: 276 TLLNSL 281
++L ++
Sbjct: 621 SILEAI 626
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 94/223 (42%), Gaps = 2/223 (0%)
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF-VPDTLSYTTLLNSLCRKKKL 287
+R D +Y L+ L Q ++++M+ V + + ++ L K +
Sbjct: 116 KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMI 175
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG-CLPNLVSYRT 346
+A + ++K + C P YN++++ EG+ ++ +M + G C P+ V+Y
Sbjct: 176 GKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSA 235
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ C G D A + + M G P + +I F + V A + EE+
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
P T+ ++ + +++ +E+ + + K DT ++
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVM 338
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 3/287 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY +I + + AL F M P N +++ L + R A
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW-REASA 101
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ ++PN ++++++ FC G++ A + M E GV P+V +Y LM G
Sbjct: 102 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 161
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+++V A L + M+ KG PD SY L+N C+ K++ EA +L M +G PDIV
Sbjct: 162 LQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 221
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ G C+ GR +A + ++M +NG LP+L +Y L+ G C QG A + + M
Sbjct: 222 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
S P+ + + LI C + EA + EL G P+ W
Sbjct: 282 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A F+ M E C+P + I++ L R + A D+F G+ PN +YN ++
Sbjct: 29 AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR-VNEALDIFSYMKAKGISPNIFTYNSLI 87
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C A + N+M +MP++ ++ +L+ C++ V A +L+ M G
Sbjct: 88 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 147
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++Y++L+N + ++ EA KL M KGC PD+ YN ++ G+C+ R +A ++
Sbjct: 148 PNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 207
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M G P++VSY TL+ GLC G A + M++ G P L+ GFC
Sbjct: 208 FNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCK 267
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
G + +A + + P+ + +++ +C +++ ++ +E+
Sbjct: 268 QGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%)
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
G P+ +Y ++ C G+ A LF KM E G PDV +Y ++ LC+ +VN
Sbjct: 4 RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 63
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A+D+ M KG P+ +Y +L+ LC + REA +L M P+IV ++ ++
Sbjct: 64 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 123
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
FC+EG +A VL+ M G PN+V+Y +L+ G Q A+K +MI+KG P
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ LI G+C ++ EA + E++ G P ++ ++ +C
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC 231
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 113/212 (53%)
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M RG PDV +Y ++ GLC+ + A L + M G PD ++Y+T+++SLC+ ++
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
+ EA + MK KG +P+I YN+++ G C R +A +L +M S +PN+V++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ C +G A+ ++ M G P+ +L+ G+ +V EA + + ++ G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
P ++ +++ C + + + ++ NE++
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 212
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ LI I+ + A ++M E +P + ++ A LF
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFE-ARKLFDVM 176
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P+ SYNI++ +C I A LFN+M +G+ PD+ SY L+ GLC+ ++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A DL ++ML G +PD +Y+ LL+ C++ L +A++L M+ P++V YN +
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
+ C+ +A K+ ++ G PN+ ++
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPNMKHWK 329
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 110 YFSLIDDI--LITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
Y +LID + L L+ H LF ++ NLPD L T+ +L+ CK
Sbjct: 223 YNTLIDGLCQLGRLREAH-----DLFKNML---TNGNLPD--LCTYSILLDGFCK----- 267
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+ YL AF LF++ + PN YNI++ A C + ++ A LF+++
Sbjct: 268 -----------QGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316
Query: 228 FERGVMPDVESYRIL 242
F +G+ P+++ +++
Sbjct: 317 FVQGLQPNMKHWKLF 331
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 155/293 (52%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ ++ A K F SM + +P +L+ T + L
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT-KGALVEM 355
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ +NI++ A+ + A +F+KM + G+ P+V +Y ++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A+ E M+++G P+ + YT+L++SLC K +A +L+ M +G +
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ + M G PN+++Y TL+ G C G D A K +
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M S G P + LI G+C V ++D+A + +E++ +G +P+ T+ +I+
Sbjct: 536 SMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 5/330 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFC 212
M E +C P +L+ L N + A +L G P+ SY ++ F
Sbjct: 149 MTELSCMPDVFSCTILLKGLC-DENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +R + PDV +Y ++ LC+ +++A+++L M+ G +P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C ++ +EA L +M+ G PD+V YN+++ C+ GR+ +A K+ + M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +Y TL+ G +G + LM+ G P V + LI + KV
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
DEA V ++ + G P+ T+ ++ +C
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 156/320 (48%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY +I + D+A++ +M++ P N IL + + A
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP-KEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV P+ +YN +M C NG + A +F+ M +RG+ PD+ +Y L+QG
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQG 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD + L+ + +++K+ EA + +M+ G NP+
Sbjct: 346 YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y V+ C+ G DA E M G PN++ Y +L+ LC +D A++ +
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + + +++ G P+ T+ ++ C
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+M++ ++L+ + V +K D
Sbjct: 526 KMDEATKLLSSMFSVGMKPD 545
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 139/270 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F +HG+ PN +Y ++ C +G + A F +M + G+ P++ Y L+
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC + ++A +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 450 SLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKP 509
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ Y+T++ G+C G+ +A K+L M S G P+ V+Y TL+ G C D A
Sbjct: 510 NVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALF 569
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G SP+ + +++G + + A + + K+G T+ +I+ +C
Sbjct: 570 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKN 629
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ + + +++ +TR IG
Sbjct: 630 NLTDEALRMFQNLCLTDLQLETRTFNIMIG 659
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 148/335 (44%), Gaps = 3/335 (0%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEF 159
IL AK + + +L+ K + + P++ TY +I I +S D A+ F M++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P ++ L + + A +L G+ NT +N ++ + C G +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDK-AEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
+ LF+ M GV P+V +Y L+ G C +++ A LL M + G PD ++Y TL+N
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR ++ +A L M G +P+I+ YN ++ G R A ++ + +G
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
L +Y ++ GLC + D A + Q + + +I VG+ DEA +
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
G P+ T+ ++ I +E+L ++
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 123/240 (51%), Gaps = 6/240 (2%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER---GVMPDVESYRILMQGLCRKSQVNR 254
+P+ S I+++ C A L + M + G PDV SY ++ G ++ ++
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDK 214
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +ML++ PD ++Y++++ +LC+ + + +A ++L M G P+ + YN+++
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G+C + +A L+ M S+G P++V+Y +L+ LC G A+K M +G P
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ L++G+ G + E +L+ +++ G P + ++ ICA + EK+ E +
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL---ICAYAKQEKVDEAM 391
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 13/287 (4%)
Query: 168 LNRILELLVTHRNYLRPA-----FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
LNR L + H PA ++ A V P +Y I++ C G + + +
Sbjct: 53 LNRALADVARHS----PAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFA 108
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSL 281
+ ++G + ++ L++GLC + + A+D+ L M +PD S T LL L
Sbjct: 109 ALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 168
Query: 282 CRKKKLREAYKLLCRM---KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C + + +EA +LL M + G PD+V Y TV+ GF +EG + A +M
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRIS 228
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++ LC D A + + M+ G P+ ++++ G+C+ + EA G
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGF 288
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L+++ G P T+ ++ +C + ++ + + K ++ D
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 132/272 (48%), Gaps = 6/272 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYR 240
L F + K G ++ +++ C + S A + +M E MPDV S
Sbjct: 103 LDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCT 162
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
IL++GLC +++ A++LL M + G PD +SYTT++N ++ +AY M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ +PD+V Y++++ C+ G+A+D A +VL M NG +PN ++Y +++ G C
Sbjct: 223 LDRRISPDVVTYSSIIAALCK-GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A +++ M S G P ++L+ C G+ EA + + + K G P T+
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ + ++ +L+ +V+ I D +
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 10/259 (3%)
Query: 218 SIAYTLFNKMFERG---VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + +N+M G V P V +Y IL+ CR +++ L +++ KGF + +++
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125
Query: 275 TTLLNSLCRKKKLREAYKL-LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T LL LC K+ +A + L RM C PD+ ++ G C E R+ +A ++L M
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMA 185
Query: 334 SN---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G P++VSY T++ G +G D A M+ + SP ++I C
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
+D+A VL ++K G P+ T+ I+ C+ E+ + E + + K+ G V
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK---EAIGFLKKMRSDGVEPDVV 302
Query: 451 AGIGLEDYLIGKTRSRPRR 469
L DYL RS R
Sbjct: 303 TYNSLMDYLCKNGRSTEAR 321
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 3/258 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY LI Y + D A K SM KP N ++ + + A
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC-RVSRMDDA 565
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LFK GV PN +YNI+++ + A L+ + + G ++ +Y I++ G
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + + A+ + +++ +T ++ ++ +L + + EA L G P+
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y + +G + ++ M NGC + +V L +G A Y+
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745
Query: 366 LMISKGFSPHFSVSHALI 383
++ K FS S + I
Sbjct: 746 MIDEKHFSLEASTASLFI 763
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 149/328 (45%), Gaps = 35/328 (10%)
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN-------------RILELLVTH--- 178
YLI+ + N RA + R LE P N R+LEL+ T
Sbjct: 268 YLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVK 327
Query: 179 -----------------RNYLR-PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
+N++ AF++F + G P+ Y ++ FC G + A
Sbjct: 328 NRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDA 387
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L+ +M ++G +P+ SY L+ G C+ ++ A+ L + ML+ G+ TLS TL+
Sbjct: 388 SKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILG 447
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC + EAY M K D++ YNT++ GFCREG+ + + +L+++ + G P+
Sbjct: 448 LCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPS 507
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
SY L+ LC G AK+ M ++G P +I G C G V E L
Sbjct: 508 TSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLI 567
Query: 401 ELLKAGEAPHEDTWVMIVPQ-ICAGEEM 427
+LK+ P ++T+ ++ I G+E+
Sbjct: 568 TMLKSNLKPQKETFYKLIQSLIQIGKEL 595
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 23/331 (6%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS---LFTYLIKIYAE 142
S P+F + ++ +LK + SL + ++ + E P S LF L++ A+
Sbjct: 116 SDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLE--AK 173
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILEL-----LVTHRNYLRPAFDLFKSAHKHGV 197
+ +P K+F EF+ P P L + LV Y FD+ K A G
Sbjct: 174 ACVP---AKSFLYSFEFS--PEPASLENYIRCVCEGGLVEEAVY---TFDMLKEA---GY 222
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV--ESYRILMQGLCRKSQVNRA 255
P +++N ++ G + + L+ M E GV DV E+ L+Q C ++V+RA
Sbjct: 223 RPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRA 282
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L L G P ++ L++ C++K +L+ M VK NPDI Y ++ G
Sbjct: 283 YEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIING 342
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ + A +V + G P++V Y TL+ G C G + A K MI KGF P+
Sbjct: 343 FCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPN 402
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ LI GFC +G +DEA + +++L +G
Sbjct: 403 EYSYNTLIYGFCKIGNLDEAMKLYKKMLDSG 433
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 133/258 (51%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A+++ + + + G+ P ++N ++ FC + L + M + PD+ +Y
Sbjct: 277 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTY 336
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ ++ G C+ +A ++ + ++G+ PD + YTTL++ C+ +L +A KL M
Sbjct: 337 QEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMID 396
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P+ YNT++ GFC+ G +A K+ + M +G +S TL+ GLC G D
Sbjct: 397 KGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE 456
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M K + LI+GFC GKV ++ +L+EL G P ++ ++
Sbjct: 457 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 516
Query: 420 QICAGEEMEKLGEVLNEI 437
++C +++ E+ N++
Sbjct: 517 KLCQLGSVQEAKEMWNDM 534
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++ LK Y ++T LI + + + A K + M++ P N ++
Sbjct: 354 EVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGF 413
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
N L A L+K G T S N ++ C +G AY F +M + ++ D
Sbjct: 414 CKIGN-LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCD 472
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y L+QG CR+ +V ++ DLL+++ KG P T SY L+ LC+ ++EA ++
Sbjct: 473 VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWN 532
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M +G P + + ++ G C +G ++ + L M + P ++ L+ L G
Sbjct: 533 DMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 592
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 106/309 (34%), Gaps = 39/309 (12%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS F+ L+K L R S EF P P N++ + L+ + + PA
Sbjct: 126 PSFFSELLKQLNNVFLSLRFFLWLSSQPEF--LPHPVSCNKLFDALLEAKACV-PAKSFL 182
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
S P S +R C G + A F+ + E G P VE++ Q +
Sbjct: 183 YSFE---FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKF 239
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ + L E M+ G D DI
Sbjct: 240 GRTDLIWKLYEGMMETGVQKDV---------------------------------DIETV 266
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
++ FC + + A ++L +G P ++ L+ G C + + + MI
Sbjct: 267 GYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIV 326
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
K +P +I GFC +A V L G AP + ++ C ++E
Sbjct: 327 KNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLED 386
Query: 430 LGEVLNEIV 438
++ E++
Sbjct: 387 ASKLWFEMI 395
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 23/366 (6%)
Query: 90 NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA 149
+R T+ LIL R + + D+ + + + LI+ + E+ D A
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA 218
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD---------LFKSAHKHGVLPN 200
L+ FR M + + + TH ++ D + + + G P
Sbjct: 219 LELFREMTQPD--------------MYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPT 264
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
T++Y ++ +C A + N+MF+ G+MP V + I++ CR+ +++ AV + E
Sbjct: 265 TRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFE 324
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M KG P+ +Y ++ C K+ +A LL +M+ G PD+V YN ++ G C +G
Sbjct: 325 SMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
A ++L M NG + +Y L+ LC G D A + +G P+ +
Sbjct: 385 HIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
+I G C GK D AC LE ++ AG AP T+ + +C + ++ ++E+++
Sbjct: 445 TVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQK 504
Query: 441 EIKGDT 446
++K T
Sbjct: 505 DVKPST 510
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 141/294 (47%), Gaps = 3/294 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P ++T+ L+K ++ + L + M E +P + +++L + A
Sbjct: 228 PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQK-AEEAEK 286
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G++P + I++ A+C G +S A +F M +G P+V +Y ++QG C
Sbjct: 287 ILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC 346
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V +A+ LL+ M G PD ++Y L+ C + A++LL M+ G D
Sbjct: 347 NAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY 406
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C+ G+ +AC + + + G PN V++ T++ GLC G FDVA +++ M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
IS G++P I+ C E ++E+L+ P + +++ ++
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRL 520
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 140/323 (43%), Gaps = 36/323 (11%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L +K + T + L+ ++ + A K M + P ++
Sbjct: 252 MLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYC 311
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ A +F+S G PN +YN +++ FC G + A L ++M E GV PDV
Sbjct: 312 -REGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y +L++G C + A LL M G D +Y L+++LC+ K+ EA L
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC---- 352
++ +G P+ V +NTV+ G C+ G+ AC LE+M S G P+ +Y + LC
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490
Query: 353 -DQGMF------------------------------DVAKKYMQLMISKGFSPHFSVSHA 381
+G+F +A + M+S+G SP
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTT 550
Query: 382 LIKGFCNVGKVDEACGVLEELLK 404
++ +CN G++DEA V+ E+ K
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKK 573
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 35/295 (11%)
Query: 163 PLPKQLNRILELLVTH--RNYLRP-AFDLFKSAHKHGV-LPNTKSYNIMMRAFCFNGDIS 218
PL +R L+TH R L P LF ++H P +YN ++RA C D+
Sbjct: 87 PLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLR 146
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A + M G PD ++ L+ G CR Q+ A DL M +GF D +SY L+
Sbjct: 147 HAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALI 206
Query: 279 NSLCRKKKLREAYKL------------------LC-------------RMKVKGCNPDIV 307
C ++ EA +L LC +MK G P
Sbjct: 207 EGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTR 266
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y +V +CRE +A +A K+L +M +G +P +V+ +V C +G A + + M
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
KG P+ +A+++GFCN GKV +A +L+++ + G P T+ +++ C
Sbjct: 327 RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF G+ PN+ ++N ++ C G +A T M G PD +Y ++
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIE 483
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ + +++ML K P T++YT ++N L ++ A ++ +M +GC+P
Sbjct: 484 NLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V Y T V +C EGR +A V+ +M + + ++Y TL+ G G D A +
Sbjct: 544 DVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTIL 603
Query: 365 QLMISKGFSP-HFS 377
+ M P HF+
Sbjct: 604 KHMTGVASMPNHFT 617
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 151/385 (39%), Gaps = 60/385 (15%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRA 149
R ++ T+ +I L +A F + L + S Y P +TY I+ ++
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY--APDTYTYSPFIENLCKTKGSQEG 494
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
L ML+ + KP ++ L RNY A ++ G P+ +Y +R
Sbjct: 495 LFFIDEMLQKDVKPSTVNYTIVINRLFNERNY-GLATRIWGQMVSQGCSPDVVTYTTSVR 553
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM------- 262
A+C G + A + +M + + D +Y L+ G Q +RAV +L+ M
Sbjct: 554 AYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMP 613
Query: 263 -------------------------------------------LNKGFVPDTL-SYTTLL 278
+ K VP + +Y ++L
Sbjct: 614 NHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSIL 673
Query: 279 NSLCRKKKLREAYKLLCRMKVKGC--NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+++L E L+ MK + N DI YN +V FC+ DA +L M +G
Sbjct: 674 EGFSEERRLDEVTSLVSLMKEENLPLNEDI--YNALVNCFCKLRMYSDAWALLCSMIGHG 731
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LPNL+ Y+ L+ GL +G D AK+ + K ++ V +I GF G D
Sbjct: 732 FLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCH 791
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQI 421
++ L + P ++T+ M+ ++
Sbjct: 792 DMISMLEQMKCKPSDETYAMLTEEL 816
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P +Y L+ LC + A++Y+ LM+ G+ P ++LI G+C +++ A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV----EAGIG 454
++ G + ++ ++ C +++ E+ E+ + ++ +V +AG G
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRG 246
Query: 455 LE 456
E
Sbjct: 247 EE 248
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 2/246 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +++ + G + +T +YNI++ C G ++ AY F M ERG + V +Y LM
Sbjct: 378 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 437
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + V+ AV+L ML++G P+ +SY ++ LCR KL +AY ++ + P
Sbjct: 438 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 497
Query: 305 DIVHYNTVVLGFCREGRAI-DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D+ +N+ + G C+ + D ++ E M S G PNL SY L+ G+C G +V +
Sbjct: 498 DVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEI 557
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
M+S+G +P V + LI+ C G+VDEA V EL + AP ++ ++ +
Sbjct: 558 FHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR-SAPDAWSYWSLLDALSR 616
Query: 424 GEEMEK 429
E ME+
Sbjct: 617 CERMEE 622
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 150/364 (41%), Gaps = 45/364 (12%)
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
YF +DD +L H+ P L+ ++ + A+ + M E C P
Sbjct: 242 YFDELDD---SLDLTHFTFNP-----LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYT 293
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+++ + L A K A + G +P+ +Y ++ C G + F++M
Sbjct: 294 SLVDGFL-KLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRN 352
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
RG PD +Y L+ G + + +A + ML G V T++Y +L+ LC+ ++ E
Sbjct: 353 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 412
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
AY M+ +GC +V Y+ ++ GFC EG A ++ M GC PNLVSY ++
Sbjct: 413 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 472
Query: 350 GLCDQGMFDVAKKYMQ------------------------------------LMISKGFS 373
GLC G A Y + M+S+G S
Sbjct: 473 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTS 532
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P+ L+ G C G ++ + E++ G AP + ++ +C +++ EV
Sbjct: 533 PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 592
Query: 434 LNEI 437
E+
Sbjct: 593 FREL 596
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 6/219 (2%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ Q++RA+ LL++M PD +++T ++N LCR+K+L EA+ +L R G
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C PD V YN + G C+ R DA ++L+ M CLP V+Y LV GL G D A
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M+ KG SP +I G G+V+EA + ++L G P + ++ +
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLI 460
++++ LN++V+ G R VE + + + +I
Sbjct: 192 AKIGKLDEALVYLNQMVE---NGCARGVEPDVVIHNLVI 227
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
L +T+ ++ C G + A L ++M PD+ ++ +++ GLCR+ +++ A
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFS 62
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
+LE + G PD ++Y ++ LC+ +++ +A++LL +M K C P V Y +V G
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+ GR +A +LE M G P L +Y ++ GL G + A++ M+ G P
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEA----PHEDTWVMIVPQICAGEEMEKLGEV 433
V ALI G +GK+DEA L ++++ G A P +++ Q+CA +E
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242
Query: 434 LNEI 437
+E+
Sbjct: 243 FDEL 246
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 134/335 (40%), Gaps = 41/335 (12%)
Query: 124 EHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ P +P + FT +I D A + C+P N ++ L
Sbjct: 33 DEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAER- 91
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF L K + LP T +Y ++ G + A + +M E+G P +++Y +
Sbjct: 92 VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTV 151
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GL + +V A + DML G PD YT L++ L + KL EA L +M G
Sbjct: 152 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211
Query: 302 C----NPDIVHYNTVVLGFCREGRAIDA-------------------------CKV---- 328
C PD+V +N V+ C G DA CK
Sbjct: 212 CARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTE 271
Query: 329 -----LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
++ M C P L +Y +LV G G D A ++ + +GF P ++I
Sbjct: 272 EAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSII 331
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G C +G+V+E C E+ G P T+ ++
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 366
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 36/300 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A K + P +Y ++ F G + A + ERG +PD +Y ++
Sbjct: 273 AIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIID 332
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPD---------------------------------- 270
GLC+ +V + +M N+G+ PD
Sbjct: 333 GLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVV 392
Query: 271 -TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
T++Y +L+ LC+ ++ EAY M+ +GC +V Y+ ++ GFC EG A ++
Sbjct: 393 STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 452
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN- 388
M GC PNLVSY ++ GLC G A Y + ++ + P ++ + G C
Sbjct: 453 RRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQR 512
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ V + + E ++ G +P+ ++ +++ IC +E E+ +E+V + D +
Sbjct: 513 LDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVV 572
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 140/325 (43%), Gaps = 42/325 (12%)
Query: 154 RSML---EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
R+ML E C P ++ L + L AF + + A + G P+ +YN+ +
Sbjct: 27 RAMLLLDEMPCSPDMVAFTVVINGLCREKR-LDEAFSVLERAVRAGCEPDYVTYNVFIDG 85
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C + A+ L KM E+ +P +Y L+ GL + +++ A+ +LE M+ KG P
Sbjct: 86 LCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPT 145
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT +++ L + ++ EA ++ M GC PD Y ++ G + G+ +A L
Sbjct: 146 LKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLN 205
Query: 331 DMPSNGCL----PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS------- 379
M NGC P++V + ++ LC G + A Y + HF+ +
Sbjct: 206 QMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALC 265
Query: 380 ---------------------------HALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+L+ GF +G++DEA L+E ++ G P
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEI 437
T+ I+ +C +E+ E +E+
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEM 350
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 156/375 (41%), Gaps = 43/375 (11%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++I L +A I + + ++T LI A+ D AL M
Sbjct: 148 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQM 207
Query: 157 LEFNC----KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
+E C +P N ++ L N L A F L + ++N ++ A C
Sbjct: 208 VENGCARGVEPDVVIHNLVIRQLCASGN-LEDALAYFDELDDSLDLTHF-TFNPLVAALC 265
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
A KM ER P + +Y L+ G + +++ A+ L++ + +GF+PD +
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD--------------------------- 305
+YT++++ LC+ ++ E + M+ +G PD
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385
Query: 306 --------IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
V YN ++ G C+ GR +A M GC+ +V+Y L+ G C +G
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + + M+ +G P+ + +I+G C GK+ +A E+LL+ P T+
Sbjct: 446 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505
Query: 418 VPQICAGEEMEKLGE 432
+ +C + ++ +G+
Sbjct: 506 LHGLC--QRLDTVGD 518
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+L +Y +I+ + +A F +L+ P N L L + + +
Sbjct: 462 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVE 521
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF+S G PN SY+I+M C G + + +F++M RGV PDV + L++ LC
Sbjct: 522 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+V+ A+++ + L + PD SY +LL++L R +++ EA L MK++GC P
Sbjct: 582 IAGRVDEALEVFRE-LERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPR-- 638
Query: 308 HYNTVV 313
HY+ V
Sbjct: 639 HYDLTV 644
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 1/281 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ +F ML P N IL LV ++ Y LFK +G+ P+ + +I++
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRY-PTVISLFKQFEPNGITPDLCTLSILI 103
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC I+ A+++F + +RG P+ + L++GLC ++ RA+ + ++ +GF
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +SY TL+N LC+ + + +LL +++ PD+V Y T++ C+ DAC +
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M G PN+ +Y TL+ G C G A + M K +P + LI
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
GK+DEA + EE+ P+ T+ ++ +C +E+
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLER 324
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H ++ AF +F + K G PN + N +++ CF G+I A +K+ +G D
Sbjct: 108 HLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQV 167
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
SY L+ GLC+ + LL + PD + YTT+++ LC+ K L +A L M
Sbjct: 168 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEM 227
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
VKG +P++ Y T++ GFC G +A +L +M P++ ++ L+ L +G
Sbjct: 228 IVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKI 287
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A + M K P+ +LI G C ++ A + +++ + G P+ ++ ++
Sbjct: 288 DEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTIL 347
Query: 418 VPQICAGEEMEKLGEVLNEIV 438
+ +C G +E + ++
Sbjct: 348 LDALCKGGRLENAKQFFQHLL 368
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 114/225 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DL+ G+ PN +Y ++ FC G++ A++L N+M + + PDV ++ I
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ L ++ +++ A+ L E+M +K P+ ++YT+L++ LC+ L A L +MK +G
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++ Y ++ C+ GR +A + + + G N+ +Y ++ GLC G+F
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M KG P+ +I + D+A L E++ G
Sbjct: 397 DLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARG 441
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P T +N ++ + N +LF + G+ PD+ + IL+ C + + A +
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
++L +G+ P+ ++ TL+ LC +++ A ++ +G D V Y T++ G C+
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
G ++L + + P+LV Y T++ LC + A MI KG SP+
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
LI GFC +G + EA +L E+ P T+ +++ + ++++ + E+
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 128 VTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
++P++FTY I+ NL + A M N P N +++ L +
Sbjct: 232 ISPNVFTYTTLIHGFCIMGNLKE-AFSLLNEMKLKNINPDVYTFNILIDALAK-EGKIDE 289
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF+ + PN +Y ++ C N + A L KM E+G+ P+V SY IL+
Sbjct: 290 AMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLD 349
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ ++ A + +L KG+ + +Y ++N LC+ + L +M+ KGC P
Sbjct: 350 ALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMP 409
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ + + T++ + A K L +M + G L
Sbjct: 410 NAITFKTIICALLEKDENDKAEKFLREMIARGLL 443
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A FN+M P + ++ L + + + L + G PD + + L+N
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C + A+ + + +G +P+ + NT++ G C G A + + + G
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ VSY TL+ GLC G + ++ + P + +I C + +AC +
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E++ G +P+ T+ ++ C +++ +LNE+ I D
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDV 271
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 35/375 (9%)
Query: 73 SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL 132
+D + A F +A Q +RHS ++Y ++ LG+ K F L+ +++ + V+ +
Sbjct: 131 NDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLAT 190
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF--- 189
T +++ A ++ A++ FR M F K +N +++ LV N + A D+F
Sbjct: 191 MTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVK-ENSVEHANDVFVEF 249
Query: 190 -------------------------------KSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+HG P+ SY ++ A+C D
Sbjct: 250 KDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFR 309
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
++ N+M E+G P+V +Y I+M L + ++++A+++ E M VPDT Y++L+
Sbjct: 310 KVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLI 369
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
L + +L++A + M +G PD++ YNT++ C + DA K+L M + C
Sbjct: 370 YILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCK 429
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P+L +Y L+ C V + M S L+ G C GK++ AC
Sbjct: 430 PDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLF 489
Query: 399 LEELLKAGEAPHEDT 413
EE++ G P + T
Sbjct: 490 FEEMVSKGLVPKDCT 504
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 172/430 (40%), Gaps = 44/430 (10%)
Query: 31 FCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIA--------------SQSDPL 76
FC ++ S + SPE S + +P GS +I S+ D
Sbjct: 20 FCTTTGSPTTAESPELPDWVKFSQNNNPAGSDSDDDFVIPKLAYWAENQKHDHRSKVDGY 79
Query: 77 LAKEIFDY----ASRQPNFRHSNSTYLILILK-LGRAKYFSLIDDILITLKSEHYPVTPS 131
+ KE D S FRHS++ ++ L G + SL++ +L ++ P
Sbjct: 80 VLKETIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPA--- 136
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
F + A++ ++ ++ SM++ K K+ + + EL+ +
Sbjct: 137 -FGFFKWAKAQTGYR-HSMNSYNSMVDILGKL--KKFDLMWELV--------------EE 178
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G + + +MR A F M GV D + LM L +++
Sbjct: 179 MDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENS 238
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V A D+ + + + ++ L++ C+ +K+ A K + MK G PD++ Y +
Sbjct: 239 VEHANDVFVE-FKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTS 297
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
+V +CRE VL +M GC PN+V+Y ++ L A + + M
Sbjct: 298 IVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSS 357
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P S +LI G++ +A V E++ K G P T+ ++ C + E
Sbjct: 358 CVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEE--- 414
Query: 432 EVLNEIVKVE 441
+ L ++K+E
Sbjct: 415 DALKLLLKME 424
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 37/288 (12%)
Query: 115 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+D+ + K + + P F LI + ++ D ALK+ M E P I+E
Sbjct: 243 NDVFVEFK-DSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEA 301
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM------- 227
+++ R + + G PN +Y I+M A +IS A ++ KM
Sbjct: 302 YCREKDF-RKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVP 360
Query: 228 ------------------------FE----RGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
FE +G +PDV +Y ++ C SQ A+ LL
Sbjct: 361 DTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLL 420
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
M PD +Y+ LL CR +++ LL M + ++ Y+ +V G C+
Sbjct: 421 LKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKS 480
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
G+ AC E+M S G +P +++ L+ L + M + ++ +LM
Sbjct: 481 GKLEHACLFFEEMVSKGLVPKDCTHKLLLKELEKKSMVEAKERVEKLM 528
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 149/328 (45%), Gaps = 35/328 (10%)
Query: 135 YLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN-------------RILELLVTH--- 178
YLI+ + N RA + R LE P N R+LEL+ T
Sbjct: 232 YLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVK 291
Query: 179 -----------------RNYLR-PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
+N++ AF++F + G P+ Y ++ FC G + A
Sbjct: 292 NRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDA 351
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
L+ +M ++G +P+ SY L+ G C+ ++ A+ L + ML+ G+ TLS TL+
Sbjct: 352 SKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILG 411
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
LC + EAY M K D++ YNT++ GFCREG+ + + +L+++ + G P+
Sbjct: 412 LCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPS 471
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
SY L+ LC G AK+ M ++G P +I G C G V E L
Sbjct: 472 TSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLI 531
Query: 401 ELLKAGEAPHEDTWVMIVPQ-ICAGEEM 427
+LK+ P ++T+ ++ I G+E+
Sbjct: 532 TMLKSNLKPQKETFYKLIQSLIQIGKEL 559
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 23/331 (6%)
Query: 86 SRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS---LFTYLIKIYAE 142
S P+F + ++ +LK + SL + ++ + E P S LF L++ A+
Sbjct: 80 SDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLE--AK 137
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLNRILEL-----LVTHRNYLRPAFDLFKSAHKHGV 197
+ +P K+F EF+ P P L + LV Y FD+ K A G
Sbjct: 138 ACVP---AKSFLYSFEFS--PEPASLENYIRCVCEGGLVEEAVY---TFDMLKEA---GY 186
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV--ESYRILMQGLCRKSQVNRA 255
P +++N ++ G + + L+ M E GV DV E+ L+Q C ++V+RA
Sbjct: 187 RPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRA 246
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++L L G P ++ L++ C++K +L+ M VK NPDI Y ++ G
Sbjct: 247 YEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIING 306
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ + A +V + G P++V Y TL+ G C G + A K MI KGF P+
Sbjct: 307 FCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPN 366
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ LI GFC +G +DEA + +++L +G
Sbjct: 367 EYSYNTLIYGFCKIGNLDEAMKLYKKMLDSG 397
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 133/258 (51%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N + A+++ + + + G+ P ++N ++ FC + L + M + PD+ +Y
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTY 300
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
+ ++ G C+ +A ++ + ++G+ PD + YTTL++ C+ +L +A KL M
Sbjct: 301 QEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMID 360
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
KG P+ YNT++ GFC+ G +A K+ + M +G +S TL+ GLC G D
Sbjct: 361 KGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDE 420
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + + M K + LI+GFC GKV ++ +L+EL G P ++ ++
Sbjct: 421 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 480
Query: 420 QICAGEEMEKLGEVLNEI 437
++C +++ E+ N++
Sbjct: 481 KLCQLGSVQEAKEMWNDM 498
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++ LK Y ++T LI + + + A K + M++ P N ++
Sbjct: 318 EVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGF 377
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
N L A L+K G T S N ++ C +G AY F +M + ++ D
Sbjct: 378 CKIGN-LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCD 436
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y L+QG CR+ +V ++ DLL+++ KG P T SY L+ LC+ ++EA ++
Sbjct: 437 VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWN 496
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M +G P + + ++ G C +G ++ + L M + P ++ L+ L G
Sbjct: 497 DMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 556
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 106/309 (34%), Gaps = 39/309 (12%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS F+ L+K L R S EF P P N++ + L+ + + PA
Sbjct: 90 PSFFSELLKQLNNVFLSLRFFLWLSSQPEF--LPHPVSCNKLFDALLEAKACV-PAKSFL 146
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
S P S +R C G + A F+ + E G P VE++ Q +
Sbjct: 147 YSFE---FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKF 203
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ + L E M+ G D DI
Sbjct: 204 GRTDLIWKLYEGMMETGVQKDV---------------------------------DIETV 230
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
++ FC + + A ++L +G P ++ L+ G C + + + MI
Sbjct: 231 GYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIV 290
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
K +P +I GFC +A V L G AP + ++ C ++E
Sbjct: 291 KNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLED 350
Query: 430 LGEVLNEIV 438
++ E++
Sbjct: 351 ASKLWFEMI 359
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 7/310 (2%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK-PLPKQLNRILELLVTHRNYLRPAFD 187
T I +A + DRALKTF + C+ P + N +L+ L+ N +
Sbjct: 32 TEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALL-RENMVGAVVP 90
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ + K GV PN +YN+++RA C N + A + ++M +G PD S+ ++ G+C
Sbjct: 91 VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMC 150
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +V A L + VP SY ++++LC + ++ E + ++ M +G P++V
Sbjct: 151 KLGRVEEARGFLAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVV 205
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y T+V FC+ AC +L M S GC PN++++ LV G + G A M
Sbjct: 206 TYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWM 265
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G++P + LI+G C +G + A + + P+ T+ +V ++
Sbjct: 266 VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDL 325
Query: 428 EKLGEVLNEI 437
+ + NE+
Sbjct: 326 DGAMLIWNEM 335
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 9/337 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTYLIKIYAESNL 145
QPN TY ++ +A+ + IL + S TP++ FT L+K + E
Sbjct: 201 QPNV----VTYTTIVDAFCKARELRMACAILARMVS--MGCTPNVLTFTALVKGFFEDGK 254
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
AL + M++ P N ++ L + L+ A D F S ++ +LPN +Y+
Sbjct: 255 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD-LKGALDFFNSMKRNALLPNATTYS 313
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ F GD+ A ++N+M G P+V Y ++ LC+K ++A L++ ML
Sbjct: 314 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 373
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P+T+++ TL+ LC ++ A + M+ GC+P+ YN ++ G REG DA
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M +NG +LV+Y T++ LC M A + M+ +G P +A+I
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+C GKV A +L ++ + + +++ ++C
Sbjct: 494 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 530
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
D ++K + ++ L+ ++ + D A+ + M CKP ++++L
Sbjct: 295 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
+ A L PNT ++N ++ C G + A +F+ M G P+
Sbjct: 355 -CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 413
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+Y L+ GL R+ A ++ +MLN GF ++Y T++N LC+ + A LL
Sbjct: 414 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 473
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
RM V+G PD +N ++ +C+EG+ A +L M + C N+V+Y L+ LC+QG
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 533
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKG-FCNVGKV 392
A Y+ M+ +G P+ + + L++ F N+G +
Sbjct: 534 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 571
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 113/229 (49%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F + + G+ PN +Y ++ AFC ++ +A + +M G P+V ++ L++G
Sbjct: 189 FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKG 248
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+V+ A+ + M+++G+ P T+SY L+ LC L+ A MK P+
Sbjct: 249 FFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN 308
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y+T+V GF G A + +M S+GC PN+V Y ++ LC + MFD A+ +
Sbjct: 309 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 368
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M+ P+ + LI C+ G+V A V + + G P++ T+
Sbjct: 369 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 417
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL-PNLVSYRTLVGGLCDQ 354
R++ C D + + F R G A A K GC P + Y L+ L +
Sbjct: 25 RLRGVACTEDALV--AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRE 82
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M M G P+ + LI+ C +VD A +L+E+ + G P E +
Sbjct: 83 NMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSH 142
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVE 441
IV +C +E+ L E V V+
Sbjct: 143 GTIVSGMCKLGRVEEARGFLAETVPVQ 169
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 149/290 (51%), Gaps = 1/290 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ F M N P N +++ ++ A + K G+ P+ +YN +M
Sbjct: 264 AIGLFNKMTSENINPDVYTFNILVDAFCK-EGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+C ++++A ++ N M RGV V SY I++ G C+ V++A+ L ++M +K
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
P+ ++Y +L++ LC+ ++ A +L+ M +G PDI+ Y++++ C+ A +
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
L + G PN+ +Y L+ GLC G + A+ + ++ KG++ + +I+GFC+
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCS 502
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G DEA +L ++ P T+ +I+ + +E +K ++L E++
Sbjct: 503 HGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMI 552
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 1/299 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ F +L N P + +IL LV ++Y LF+ G+ PN ++NI++
Sbjct: 54 AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHY-HTVLSLFQKMEYRGIKPNFVNFNILI 112
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
FC G I A+++ K+ + G PD + ++G C K Q+++A++ + ++ GF
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +SY TL+N LC+ + R A +LL R+ K D+V Y+T++ C++ DA +
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M S N+V+Y L+ G C G A M S+ +P + L+ FC
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
G+V EA L ++K G P T+ ++ C E+ +LN + + R
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 127/257 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDL+ + N +Y+ ++ FC G + A LFNKM + PDV ++ I
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ C++ +V A + L M+ +G PD ++Y +L++ C ++ A +L M +G
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ YN V+ GFC+ A K+ ++M PN+++Y +L+ GLC G A
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + LM +G P +++ C VD+A +L +L G P+ T+ +++ +
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Query: 422 CAGEEMEKLGEVLNEIV 438
C G +E + +++
Sbjct: 466 CKGGRLEDARNIFEDLL 482
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 125/242 (51%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A LF + P+ ++NI++ AFC G + A M ++G+ PD+ +Y
Sbjct: 261 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNS 320
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C ++VN A +L M ++G SY ++N C+ K + +A KL M K
Sbjct: 321 LMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ 380
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+++ YN+++ G C+ GR A ++++ M G P++++Y +++ LC + D A
Sbjct: 381 IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAI 440
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + +G P+ LI G C G++++A + E+LL G +T+ +++
Sbjct: 441 ALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGF 500
Query: 422 CA 423
C+
Sbjct: 501 CS 502
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK H + PN +YN ++ C +G IS A L + M +RG PD+ +Y ++
Sbjct: 369 AMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ V++A+ LL + ++G P+ +YT L++ LC+ +L +A + + VKG N
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNL 488
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ Y ++ GFC G +A +L M N C+P+ ++Y ++ L D+ D A+K +
Sbjct: 489 TVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLL 548
Query: 365 QLMISKGFSPHF 376
+ MI++G F
Sbjct: 549 REMITRGLLYSF 560
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + K G P+T + N ++ FC G I A +K+ G D SY L+
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 183
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + A++LL + K D + Y+T+++S+C+ K + +A+ L M + +
Sbjct: 184 GLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISS 243
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+IV Y+ ++ GFC G+ DA + M S P++ ++ LV C +G AK +
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL 303
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+M+ +G P ++L+ G+C V +V+ A +L + G ++ +++ C
Sbjct: 304 AMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKI 363
Query: 425 EEMEKLGEVLNEIVKVEI 442
+ +++ ++ E+ +I
Sbjct: 364 KMVDQAMKLFKEMHHKQI 381
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 139/283 (49%), Gaps = 7/283 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLR 183
+ P ++T+ L+ + + A M++ KP N +++ LV N +
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
+ + GV +SYNI++ FC + A LF +M + + P+V +Y L+
Sbjct: 336 S---ILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ +++ A++L++ M ++G PD ++Y+++L++LC+ + +A LL ++K +G
Sbjct: 393 DGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIR 452
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ Y ++ G C+ GR DA + ED+ G + +Y ++ G C G+FD A
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ M P +I + + D+A +L E++ G
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 3/316 (0%)
Query: 122 KSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E+ + P+ F LI + + L A +L+ +P LN ++ +
Sbjct: 95 KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCL-K 153
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A + G + SY ++ C G+ A L ++ + V DV Y
Sbjct: 154 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMY 213
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
++ +C+ VN A DL +M+++ + ++Y+ L++ C KL++A L +M
Sbjct: 214 STIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
+ NPD+ +N +V FC+EGR +A L M G P++V+Y +L+ G C ++
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNM 333
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK + M +G + + +I GFC + VD+A + +E+ P+ T+ ++
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393
Query: 420 QICAGEEMEKLGEVLN 435
+C + E+++
Sbjct: 394 GLCKSGRISYALELID 409
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 166/357 (46%), Gaps = 25/357 (7%)
Query: 83 DYASRQPNFRHSNSTYLILI---LKLGRAKY-FSLIDDILITLKSEHYPVTPSLFTYLI- 137
+Y +PNF + N ILI +LG + FS++ IL K + P T +L T++
Sbjct: 97 EYRGIKPNFVNFN----ILINCFCQLGLIPFAFSVLAKIL---KMGYEPDTITLNTFIKG 149
Query: 138 -----KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+I+ N D+ + + + + L L ++ E R A +L +
Sbjct: 150 FCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET--------RAALELLRRV 201
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
V + Y+ ++ + C + +++ A+ L+++M R + ++ +Y L+ G C ++
Sbjct: 202 DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKL 261
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A+ L M ++ PD ++ L+++ C++ +++EA L M +G PDIV YN++
Sbjct: 262 KDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSL 321
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G+C A +L M G + SY ++ G C M D A K + M K
Sbjct: 322 MDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI 381
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
P+ ++LI G C G++ A +++ + G+ P T+ I+ +C ++K
Sbjct: 382 FPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDK 438
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 125 HYPVTPSLFTYLIKI--YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H VT ++ +Y I I + + + D+A+K F+ M P N +++ L +
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCK-SGRI 401
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A +L H G P+ +Y+ ++ A C N + A L K+ ++G+ P++ +Y IL
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLC+ ++ A ++ ED+L KG+ +YT ++ C EA LL +MK C
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
PD + Y ++ + A K+L +M + G L + + Y
Sbjct: 522 IPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEY 563
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 16/316 (5%)
Query: 113 LIDDILITLKSEHYP-VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
++D + K H+ + P++ TY LI +S AL+ M + +P +
Sbjct: 365 MVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYS 424
Query: 170 RILELLVTHRNYL-RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
IL+ L +N+L A L G+ PN +Y I++ C G + A +F +
Sbjct: 425 SILDALC--KNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+G V +Y +++QG C + A+ LL M + +PD ++Y ++ SL K +
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542
Query: 289 EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI---DACKVLEDMPSNGCLPNLVSYR 345
+A KLL M +G + Y + L F D+ + S L+
Sbjct: 543 KAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERI 602
Query: 346 TLVGGLCDQGMFDVAKKYMQLMI-------SKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
L M D + ++I +G+ + +I+GFC+ G DE+ +
Sbjct: 603 YCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLAL 662
Query: 399 LEELLKAGEAPHEDTW 414
L ++ G P T+
Sbjct: 663 LSKMEVNGCIPDAVTY 678
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
D +G++ D +YT ++ C E+ LL +M+V GC PD V Y+
Sbjct: 630 DWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 163/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + ++ +I
Sbjct: 28 ALQFFRWVERSNLFEHNRDTHLKIIEILGRALKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y ++ + ++K F+ M E GV
Sbjct: 88 DSYGKAGIVQESVKLFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSY+ + + G +A FNKM G+ P ++ +L+ G +V+ A
Sbjct: 112 ERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N R KK+ EA K MK + P +V Y T++ G+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
+ DA +++E+M G PN ++Y TL+ GLCD G A+ ++ M+ K +P
Sbjct: 232 SVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAPKDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI C G + A VL+ +++ + +++ C + +K ++L++
Sbjct: 292 SIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 173/372 (46%), Gaps = 21/372 (5%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA 141
F + N HS + +I L + K F ++L + Y +PS+ +++I+
Sbjct: 62 FKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 121
Query: 142 ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
+ PD Q+ L + + + A +F+ HG P+
Sbjct: 122 D---PDS----------------NSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHL 162
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ +++ + ++ + ++ KM GV+P++ + +L+ C+ V +A LL +
Sbjct: 163 HACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNE 222
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
M ++ PD +Y TL++ C+K EA + RM+ G +PDIV YN+++ GFCREGR
Sbjct: 223 MESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGR 282
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ ++ NG PN V+Y TL+ G C + A + ++M +G P ++
Sbjct: 283 MREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNS 340
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVE 441
+++ C GK+ +A +L E+ + P T ++ C +M +V ++++
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 442 IKGDTRIVEAGI 453
+K D +A I
Sbjct: 401 LKPDQFTFKALI 412
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P LFTY LI +Y + + AL M P N ++ +R A
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGF-CREGRMREA 286
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ + G PN +Y ++ +C D+ A L M G+ P V +Y +++
Sbjct: 287 LRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRK 344
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + ++ A LL +M + PD ++ TL+N+ C+ + A K+ +M G PD
Sbjct: 345 LCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 404
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ ++ GFC+ A + L +M G P+ +Y LV DQ + +
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPD 464
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
+ KG SV ALI+ C + K++ A
Sbjct: 465 ELSRKGLFVDISVYRALIRRLCKIDKIESA 494
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP+ TY LI Y N + AL+ M P N IL L ++ A
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL-CEEGKIKDAN 355
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + V P+ + N ++ A+C GD+ A + KM E G+ PD +++ L+ G
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Query: 247 CRKSQVNRAVDLLEDMLNKGF-------------------------VPDTLS-------- 273
C+ +V+ A + L +ML+ GF +PD LS
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475
Query: 274 --YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
Y L+ LC+ K+ A ++ M+ KG D V Y ++ + + G+AI A +L++
Sbjct: 476 SVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQG 355
M + L YR G
Sbjct: 536 MDKRRLMITLKIYRCFSASYAGDG 559
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 179/387 (46%), Gaps = 54/387 (13%)
Query: 67 KLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH- 125
+LI +D L FD+ S + F H ++ +++ LGRA+ ++ + L +++
Sbjct: 76 RLIKVPADGL---RFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSN 131
Query: 126 --YPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
+ F LI+ Y + L ++K F++M KQ+
Sbjct: 132 GCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTM---------KQM--------------- 167
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRIL 242
G+ P+ ++N ++ G +A+ LF++M GV PD ++ L
Sbjct: 168 ------------GISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM--KVK 300
+ G C+ S V+ A + +DM PD ++Y T+++ LCR K++ A+ +L M K
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
+P++V Y T+V G+C + +A V DM S G PN V+Y TL+ GL + +D
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI 335
Query: 361 KKYMQLMISKG-----FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
K ++I F+P + LIK C+ G +D A V +E+L P ++
Sbjct: 336 K---DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 392
Query: 416 MIVPQICAGEEMEKLGEVLNEIVKVEI 442
+++ +C E ++ + NE+ + E+
Sbjct: 393 VLIRTLCMRNEFDRAETLFNELFEKEV 419
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 21/302 (6%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY +I L RA + ++L + + V P++ +Y L++ Y D A+ F
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNY------LRPAFDLFKSAHKHGVLPNTKSYNIMM 208
ML KP N +++ L Y L D F + P+ ++NI++
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT-----FAPDACTFNILI 360
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+A C G + A +F +M + PD SY +L++ LC +++ +RA L ++ K +
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 269 -------PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
P +Y + LC K ++A K+ ++ +G D Y T++ G CREG+
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGK 479
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A ++L M +P+L +Y L+ GL G +A +Q M+ + P + H+
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHS 539
Query: 382 LI 383
++
Sbjct: 540 VL 541
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 153/398 (38%), Gaps = 49/398 (12%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFR 154
TY LI L A + I DILI P F LIK + ++ D A+K F+
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Query: 155 SML----------------------EFN--------------------CKPLPKQLNRIL 172
ML EF+ CKPL N +
Sbjct: 378 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 437
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
E L + + A +F+ K GV + SY ++ C G AY L M R
Sbjct: 438 EYLCAN-GKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREF 495
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
+PD+E+Y +L+ GL + + A D L+ ML ++P ++ ++L L ++K E++
Sbjct: 496 VPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFC 555
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L+ M K +I VV + A ++ + NG LV L+G LC
Sbjct: 556 LVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNG---YLVKMEELLGYLC 612
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+ A + + K + +I+G C + EA + EL++ G
Sbjct: 613 ENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLS 672
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
V++ + A + E+L V + + D ++E
Sbjct: 673 CHVVLRNALEAAGKWEELQFVSKRMATLRESDDCSVLE 710
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 155/293 (52%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ ++ A K F SM + +P +L+ T + L
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT-KGALVEM 355
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ +NI++ A+ + A +F+KM + G+ P+V +Y ++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V+ A+ E M+++G P+ + YT+L++SLC K +A +L+ M +G +
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ + M G PN+++Y TL+ G C G D A K +
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M S G P + LI G+C V ++D+A + +E++ +G +P+ T+ +I+
Sbjct: 536 SMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 5/330 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFK---SAHKHGVLPNTKSYNIMMRAFC 212
M E +C P +L+ L N + A +L G P+ SY ++ F
Sbjct: 149 MTELSCMPDVFSCTILLKGLC-DENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +R + PDV +Y ++ LC+ +++A+++L M+ G +P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C ++ +EA L +M+ G PD+V YN+++ C+ GR+ +A K+ + M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++ +Y TL+ G +G + LM+ G P V + LI + KV
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
DEA V ++ + G P+ T+ ++ +C
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 156/320 (48%), Gaps = 3/320 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P + TY +I + D+A++ +M++ P N IL + + A
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP-KEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV P+ +YN +M C NG + A +F+ M +RG+ PD+ +Y L+QG
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQG 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD + L+ + +++K+ EA + +M+ G NP+
Sbjct: 346 YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y V+ C+ G DA E M G PN++ Y +L+ LC +D A++ +
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + + +++ G P+ T+ ++ C
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+M++ ++L+ + V +K D
Sbjct: 526 KMDEATKLLSSMFSVGMKPD 545
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 139/270 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F +HG+ PN +Y ++ C +G + A F +M + G+ P++ Y L+
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC + ++A +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 450 SLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKP 509
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ Y+T++ G+C G+ +A K+L M S G P+ V+Y TL+ G C D A
Sbjct: 510 NVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALF 569
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G SP+ + +++G + + A + + K+G T+ +I+ +C
Sbjct: 570 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKN 629
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
++ + + +++ +TR IG
Sbjct: 630 NLTDEALRMFQNLCLTDLQLETRTFNIMIG 659
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 3/322 (0%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEF 159
IL AK + + +L+ K + + P++ TY +I I +S D A+ F M++
Sbjct: 376 ILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE 435
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
P ++ L + + A +L G+ NT +N ++ + C G +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDK-AEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
+ LF+ M GV P+V +Y L+ G C +++ A LL M + G PD ++Y TL+N
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR ++ +A L M G +P+I+ YN ++ G R A ++ + +G
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
L +Y ++ GLC + D A + Q + + +I VG+ DEA +
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674
Query: 400 EELLKAGEAPHEDTWVMIVPQI 421
L G P T+ ++ +
Sbjct: 675 AALSANGLVPDVRTYSLMAENL 696
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 123/240 (51%), Gaps = 6/240 (2%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER---GVMPDVESYRILMQGLCRKSQVNR 254
+P+ S I+++ C A L + M + G PDV SY ++ G ++ ++
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDK 214
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A +ML++ PD ++Y++++ +LC+ + + +A ++L M G P+ + YN+++
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G+C + +A L+ M S+G P++V+Y +L+ LC G A+K M +G P
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ L++G+ G + E +L+ +++ G P + ++ ICA + EK+ E +
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL---ICAYAKQEKVDEAM 391
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 13/287 (4%)
Query: 168 LNRILELLVTHRNYLRPA-----FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
LNR L + H PA ++ A V P +Y I++ C G + + +
Sbjct: 53 LNRALADVARHS----PAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFA 108
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSL 281
+ ++G + ++ L++GLC + + A+D+ L M +PD S T LL L
Sbjct: 109 ALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 168
Query: 282 CRKKKLREAYKLLCRM---KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
C + + +EA +LL M + G PD+V Y TV+ GF +EG + A +M
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRIS 228
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
P++V+Y +++ LC D A + + M+ G P+ ++++ G+C+ + EA G
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGF 288
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
L+++ G P T+ ++ +C + ++ + + K ++ D
Sbjct: 289 LKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 132/272 (48%), Gaps = 6/272 (2%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYR 240
L F + K G ++ +++ C + S A + +M E MPDV S
Sbjct: 103 LDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCT 162
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
IL++GLC +++ A++LL M + G PD +SYTT++N ++ +AY M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
+ +PD+V Y++++ C+ G+A+D A +VL M NG +PN ++Y +++ G C
Sbjct: 223 LDRRISPDVVTYSSIIAALCK-GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A +++ M S G P ++L+ C G+ EA + + + K G P T+
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
++ + ++ +L+ +V+ I D +
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 10/259 (3%)
Query: 218 SIAYTLFNKMFERG---VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + +N+M G V P V +Y IL+ CR +++ L +++ KGF + +++
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125
Query: 275 TTLLNSLCRKKKLREAYKL-LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T LL LC K+ +A + L RM C PD+ ++ G C E R+ +A ++L M
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMA 185
Query: 334 SN---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G P++VSY T++ G +G D A M+ + SP ++I C
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
+D+A VL ++K G P+ T+ I+ C+ E+ + E + + K+ G V
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK---EAIGFLKKMRSDGVEPDVV 302
Query: 451 AGIGLEDYLIGKTRSRPRR 469
L DYL RS R
Sbjct: 303 TYNSLMDYLCKNGRSTEAR 321
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 13/262 (4%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR-- 183
V P++ TY LI Y + D A K SM KP N ++ Y R
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN------GYCRVS 560
Query: 184 ---PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A LFK GV PN +YNI+++ + A L+ + + G ++ +Y
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I++ GLC+ + + A+ + +++ +T ++ ++ +L + + EA L +
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 680
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G PD+ Y+ + +G + + M NGC N ++V L +G A
Sbjct: 681 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740
Query: 361 KKYMQLMISKGFSPHFSVSHAL 382
Y+ ++ K FS S + L
Sbjct: 741 GTYLSMIDEKHFSLEASTASLL 762
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 96/214 (44%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A L S G+ P+ +YN ++ +C + A LF +M GV P++ +Y I
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++QGL + A +L + G + +Y +L+ LC+ EA ++ + +
Sbjct: 587 ILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ +N ++ + GR +A + + +NG +P++ +Y + L +QG+ +
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 706
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M G + + + +++++ G + A
Sbjct: 707 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 166/361 (45%), Gaps = 4/361 (1%)
Query: 61 SPCRVQKLIASQS--DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
SP +V+ ++ +Q+ D A E F +A RQ +RH+ + ++ L + ++
Sbjct: 91 SPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVV 150
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ F L+ Y+ + A++ M + C P N + +LV
Sbjct: 151 RLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVA 210
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ A + + + GV P+ +YN +++ C + A + M + G PD S
Sbjct: 211 -GRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKIS 269
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y +M LC++ +V LL+ M N G PD ++Y L++ L + EA + L
Sbjct: 270 YYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRES 329
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ K D V Y+ +V FC GR +A +++ +M S GC P++V+Y T+V G C G
Sbjct: 330 EGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGEL 389
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A+K M+ M P+ AL+ G C VGK EA +L + + P + T+ ++
Sbjct: 390 DQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVV 449
Query: 418 V 418
+
Sbjct: 450 M 450
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 155/352 (44%), Gaps = 38/352 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI L + + + L + + + V ++ ++ + + A + M
Sbjct: 305 TYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM 364
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ C+P + +++ L A + K +K+ PNT ++ ++ C G
Sbjct: 365 ISKGCQPDVVTYSTVVDGFC-RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGK 423
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
S A+ L NK E P +Y ++M G R+ ++ + D++ ML KGF P T+
Sbjct: 424 TSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINL 483
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE----------------- 319
L+++LC+ +K EA + + + KGC ++V++ TV+ GF R+
Sbjct: 484 LIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSN 543
Query: 320 ------------------GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
GR +A ++E M + G LP V+YRT++ C++G +
Sbjct: 544 RHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLL 603
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
++ M+++ S + +++ C GK++EA +L ++L+ T
Sbjct: 604 NLLEKMLAR--QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQT 653
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 2/281 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LIK + A++ ML+ C P ++ L +
Sbjct: 228 VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVR 287
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + G+ P+ +YN+++ +G A + + D Y ++
Sbjct: 288 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 347
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C ++ A +++ +M++KG PD ++Y+T+++ CR +L +A K++ M C P+
Sbjct: 348 FCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPN 407
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V + ++ G C+ G+ +A ++L P+ ++Y ++ G +G + +
Sbjct: 408 TVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVV 467
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M+ KGF P + LI C K EA +E+ G
Sbjct: 468 QMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKG 508
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 4/276 (1%)
Query: 165 PKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI-SIAYTL 223
P Q+ +L R +R AF+ F+ A + + M + N + A +
Sbjct: 92 PPQVRAVLR--AQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRV 149
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M RGV E + LM R ++ A+ +L M G PD +N L
Sbjct: 150 VRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVV 209
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
++ +A + RM+ G PD+ YN ++ G C R +DA +++ M NGC P+ +S
Sbjct: 210 AGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKIS 269
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y T++ LC + + + +Q M + G P + LI G G DEA L E
Sbjct: 270 YYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRES 329
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
E + IV C M + E++ E++
Sbjct: 330 EGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 38/256 (14%)
Query: 122 KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
KSE TPS TY + ++ E L + + ML+ P ++N ++ L
Sbjct: 433 KSEEEWWTPSDITYSVVMHGFRREGKLKE-SCDVVVQMLQKGFFPTTVEINLLIHALCKD 491
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R A D + G N ++ ++ F GD+ A +L + M+ PDV +
Sbjct: 492 RKPA-EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVT 550
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK------------- 285
Y +++ L +K ++ A L+E MLN+G +P ++Y T+++ C K
Sbjct: 551 YTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKML 610
Query: 286 --------------------KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
KL EAY LL ++ D + ++ F G + A
Sbjct: 611 ARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQA 670
Query: 326 CKVLEDMPSNGCLPNL 341
V M +P++
Sbjct: 671 YNVACRMFRRNLIPDV 686
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
+LI L + + + D + +S+ + FT +I ++ + AL M
Sbjct: 483 LLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLS 542
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
N P +++ L + L+ A L + GVLP +Y ++ +C G++
Sbjct: 543 NRHPDVVTYTVVVDAL-GKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLED 601
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
L KM R M +Y +++ LC ++N A LL +L V D + L+
Sbjct: 602 LLNLLEKMLARQEMKS--AYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILME 659
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDI 306
S + +AY + CRM + PD+
Sbjct: 660 SFLNRGLGLQAYNVACRMFRRNLIPDV 686
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 163/366 (44%), Gaps = 37/366 (10%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A + F + R F H+ T+L +I LGRA + IL+ + + ++ +I
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
Y + + ++K F+ M E GV
Sbjct: 88 DSYGKEGIVQESVKMFQKMEEL------------------------------------GV 111
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
KSYN + + G +A FNKM G+ P ++ +++ G +V A
Sbjct: 112 ERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANR 171
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
EDM ++ PD ++Y T++N R KK+ EA K MK + P +V Y T++ G+
Sbjct: 172 FFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYV 231
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP-HF 376
+ DA +++E+M +G PN ++Y TL+ GLC+ A+ ++ M+ K +P
Sbjct: 232 SVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDN 291
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNE 436
S+ LI C G +D A VL+ +++ + +++ + C + +K ++L++
Sbjct: 292 SIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDK 351
Query: 437 IVKVEI 442
+++ +I
Sbjct: 352 LIEKDI 357
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 3/302 (0%)
Query: 143 SNLPDRALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRPAFDLFKSAHKHGVLPNT 201
SN + AL+ FR + N ++ + +I+E+L + L A + K G+ +
Sbjct: 22 SNTSEHALQFFRWVERSNLFEHNRETHLKIIEIL-GRASKLNHARCILLDMPKKGLEWDE 80
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
+ +M+ ++ G + + +F KM E GV ++SY L + + R+ + A
Sbjct: 81 DMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNK 140
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGR 321
ML++G P ++ ++ K+ A + MK + +PD+V YNT++ G+ R +
Sbjct: 141 MLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKK 200
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A K +M P +V+Y TL+ G D A + ++ M G P+
Sbjct: 201 MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYST 260
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM-IVPQICAGEEMEKLGEVLNEIVKV 440
L+ G CN K+ EA +L+E++ AP +++ M ++ C ++ +VL ++++
Sbjct: 261 LLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRL 320
Query: 441 EI 442
+
Sbjct: 321 SV 322
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 117/298 (39%), Gaps = 44/298 (14%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +I R K + + +K + T +T LIK Y + D AL+ M
Sbjct: 187 TYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 157 LEFNCKP------------------------LPKQLNRIL---------ELLVTH--RNY 181
KP L + +++ L L+ +H
Sbjct: 247 KGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGN 306
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES--- 238
L A D+ K+ + V Y +++ FC G A L +K+ E+ ++ +S
Sbjct: 307 LDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLH 366
Query: 239 -----YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
Y +++ LC Q ++A L+ ++ G V D + TL+ ++ A++L
Sbjct: 367 LEPNAYNPMIEYLCNNGQASKAETLVRQLMKLG-VQDPTALNTLIRGHSQEGSPDSAFEL 425
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M + + + YN++V + ++ DA L+ M N LP+ +R+++ L
Sbjct: 426 LKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSALFRSVMESL 483
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 147/292 (50%), Gaps = 1/292 (0%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M E C P +++ L N L AF+L + + G PN +N +M A C G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKA-NRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEG 59
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ AY M GV P + +Y IL+ G C++ +++RA+++L++M +G P+ ++Y
Sbjct: 60 RSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN 119
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
T L+ LC+ K+ +A L M K D+ Y T++ G C+ G+ +A +L++M ++
Sbjct: 120 TFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
GC+P Y ++ LC + A K + M G P + ++ G+C ++D+A
Sbjct: 180 GCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
+L+++ AG AP E + ++ + + + +L E++ + ++R
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSR 291
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 3/293 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P++ T+ L+ ++N A + M E C P N I++ L A+
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAE-AYG 66
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ GV P +YNI++ FC + A + +M RG P+ +Y + GLC
Sbjct: 67 YIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLC 126
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ +V+ A+ L M K D YTTL++ LC+ KL EAY LL M+ GC P
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPG 186
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YN ++ C+ R +A K+ + M +G LP+ +++ +V G C D A +Q M
Sbjct: 187 CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQM 246
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
S G +P + + LI G+V EA +L+E++ G +P+ T+ ++ Q
Sbjct: 247 KSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQ 299
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 166/361 (45%), Gaps = 4/361 (1%)
Query: 61 SPCRVQKLIASQS--DPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
SP +V+ ++ +Q+ D A E F +A RQ +RH+ + ++ L + ++
Sbjct: 91 SPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVV 150
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ F L+ Y+ + A++ M + C P N + +LV
Sbjct: 151 RLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVA 210
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ A + + + GV P+ +YN +++ C + A + M + G PD S
Sbjct: 211 -GRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKIS 269
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y +M LC++ +V LL+ M N G PD ++Y L++ L + EA + L
Sbjct: 270 YYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRES 329
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ K D V Y+ +V FC GR +A +++ +M S GC P++V+Y T+V G C G
Sbjct: 330 EGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGEL 389
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D A+K M+ M P+ AL+ G C VGK EA +L + + P + T+ ++
Sbjct: 390 DQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVV 449
Query: 418 V 418
+
Sbjct: 450 M 450
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 155/352 (44%), Gaps = 38/352 (10%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY +LI L + + + L + + + V ++ ++ + + A + M
Sbjct: 305 TYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM 364
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ C+P + +++ L A + K +K+ PNT ++ ++ C G
Sbjct: 365 ISKGCQPDVVTYSTVVDGFC-RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGK 423
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
S A+ L NK E P +Y ++M G R+ ++ + D++ ML KGF P T+
Sbjct: 424 TSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINL 483
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE----------------- 319
L+++LC+ +K EA + + + KGC ++V++ TV+ GF R+
Sbjct: 484 LIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSN 543
Query: 320 ------------------GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
GR +A ++E M + G LP V+YRT++ C++G +
Sbjct: 544 RHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLL 603
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
++ M+++ S + +++ C GK++EA +L ++L+ T
Sbjct: 604 NLLEKMLAR--QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQT 653
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 2/281 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY LIK + A++ ML+ C P ++ L +
Sbjct: 228 VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVR 287
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + G+ P+ +YN+++ +G A + + D Y ++
Sbjct: 288 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 347
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C ++ A +++ +M++KG PD ++Y+T+++ CR +L +A K++ M C P+
Sbjct: 348 FCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPN 407
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V + ++ G C+ G+ +A ++L P+ ++Y ++ G +G + +
Sbjct: 408 TVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVV 467
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
M+ KGF P + LI C K EA +E+ G
Sbjct: 468 QMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKG 508
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 9/282 (3%)
Query: 166 KQLNRILE-------LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI- 217
+QL R+L L R +R AF+ F+ A + + M + N +
Sbjct: 84 RQLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLH 143
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A + M RGV E + LM R ++ A+ +L M G PD
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N L ++ +A + RM+ G PD+ YN ++ G C R +DA +++ M NGC
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ +SY T++ LC + + + +Q M + G P + LI G G DEA
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L E E + IV C M + E++ E++
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 38/256 (14%)
Query: 122 KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
KSE TPS TY + ++ E L + + ML+ P ++N ++ L
Sbjct: 433 KSEEEWWTPSDITYSVVMHGFRREGKLKE-SCDVVVQMLQKGFFPTTVEINLLIHALCKD 491
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R A D + G N ++ ++ F GD+ A +L + M+ PDV +
Sbjct: 492 RKPA-EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVT 550
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK------------- 285
Y +++ L +K ++ A L+E MLN+G +P ++Y T+++ C K
Sbjct: 551 YTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKML 610
Query: 286 --------------------KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
KL EAY LL ++ D + ++ F G + A
Sbjct: 611 ARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQA 670
Query: 326 CKVLEDMPSNGCLPNL 341
V M +P++
Sbjct: 671 YNVACRMFRRNLIPDV 686
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 100 ILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEF 159
+LI L + + + D + +S+ + FT +I ++ + AL M
Sbjct: 483 LLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLS 542
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISI 219
N P +++ L + L+ A L + GVLP +Y ++ +C G++
Sbjct: 543 NRHPDVVTYTVVVDAL-GKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLED 601
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
L KM R M +Y +++ LC ++N A LL +L V D + L+
Sbjct: 602 LLNLLEKMLARQEMKS--AYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILME 659
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDI 306
S + +AY + CRM + PD+
Sbjct: 660 SFLNRGLGLQAYNVACRMFRRNLIPDV 686
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 141/262 (53%), Gaps = 4/262 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER-GVMPDVESYRILM 243
+ +FK+ + GV P+ ++N ++ G S+A LF++M + GV PD ++ IL+
Sbjct: 255 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 314
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+G C S V+ ++M PD ++Y TL++ LCR K++ A+ ++ M K N
Sbjct: 315 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN 374
Query: 304 --PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V Y T++ G+C + +A +L +M S G PN ++Y TL+ GLC+ D K
Sbjct: 375 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 434
Query: 362 KYMQLMISK-GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ ++ M+ GF P + LIK C +GK++EA V E++ + P T+ ++V
Sbjct: 435 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 494
Query: 421 ICAGEEMEKLGEVLNEIVKVEI 442
+C + + E +E+ + EI
Sbjct: 495 LCQRGDFRRAEEFFDELAEKEI 516
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 162/359 (45%), Gaps = 29/359 (8%)
Query: 75 PLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE---------- 124
P A F + + F H+ +Y ++I LGR++ + + + +++ +
Sbjct: 201 PAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVF 259
Query: 125 ----HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVT 177
V+PS+ T+ L+ I + A + F ML+ + P N ++
Sbjct: 260 KTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCM 319
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER--GVMPD 235
+ + + F FK + P+ +YN ++ C G + IA+ + M ++ + P+
Sbjct: 320 N-SMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPN 378
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V +Y L++G C K + A+ LL +M+++G P+ ++Y TL+ LC +KL + ++L
Sbjct: 379 VVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILE 438
Query: 296 RMKVKGCN-PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M G PD NT++ C G+ +A V E M P+ +Y LV LC +
Sbjct: 439 GMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQR 498
Query: 355 GMFDVAKKYMQLMISK-------GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
G F A+++ + K G P + + + + C+ GK +A V +L+K G
Sbjct: 499 GDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG 557
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 87 RQPNFRHSNSTYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIY 140
+ PN + TY LI +K A+ SL+ +++ + P+ TY LI+
Sbjct: 371 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV------SRGLKPNKITYNTLIQGL 424
Query: 141 AESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
E+ D+ + M+ + P LN +++ T L AF +F+ + V P
Sbjct: 425 CEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCT-MGKLEEAFSVFEKMSELRVQP 483
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFER-------GVMPDVESYRILMQGLCRKSQV 252
++ +Y++++R+ C GD A F+++ E+ G P V +Y + + LC +
Sbjct: 484 DSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKT 543
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+A + ++ +G D SY TL+ CR+ + LL M + PD Y +
Sbjct: 544 KKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLM 602
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+ G ++G + A K LE M + LP + +++ L ++
Sbjct: 603 IDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 644
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 21/250 (8%)
Query: 158 EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+ CKPL N + E L ++ + A +F+ K G + SY ++ C G
Sbjct: 520 DVGCKPLVAAYNPMFEYLCSN-GKTKKAERVFRQLMKRGT-QDPPSYKTLILGHCREGTP 577
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
+ L M R +PD E+Y +++ GL +K A LE ML +P T + ++
Sbjct: 578 EAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSI 637
Query: 278 LNSLCRK-KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
L +L K +++R+ N D+ + +L + G A + + NG
Sbjct: 638 LAALVEKERRIRQ-------------NIDLSTHTVRLL--YKSGLQDKAFMTIGLLYENG 682
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
LV LV LC A+K + + K S + +I G C KV EA
Sbjct: 683 ---YLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAF 739
Query: 397 GVLEELLKAG 406
+ EL++ G
Sbjct: 740 ALYYELVEKG 749
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 205/440 (46%), Gaps = 14/440 (3%)
Query: 7 LRSSKIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRV- 65
L S + T+ GA PP S S SP++ Q + +S +P +P V
Sbjct: 4 LFSKSLCTSAAGANLKPPPADSAAIAKLILS--SPNTTHQDDQFLLSTKTTP-WTPNLVN 60
Query: 66 ---QKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLK 122
++L L D R+ + H S++ + I R + ++ ++
Sbjct: 61 SVLKRLWNHGPKALQFFHFLDNHHRE--YVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118
Query: 123 SEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
S +P F + + YA + PD+A+K F +M E C N IL++L + +
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR-V 177
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A++LF++ + +T +YN+++ +C A + +M ERG+ P++ +Y +
Sbjct: 178 EKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++G R Q+ A + +M + D ++YTT+++ +++ A + M +G
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P + YN ++ C++ +A + E+M G PN+ +Y L+ GL G F ++
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
MQ M ++G P+F + +I+ + +V++A G+ E++ P+ DT+ +++ +
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 423 A---GEEMEKLGEVLNEIVK 439
E+M G++L E+V+
Sbjct: 417 VRKRSEDMVVAGKLLLEMVE 436
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V PS+ TY +I++ + + + A+ F M+ +P N ++ L H
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF-HAGEFSRG 354
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+L + G PN ++YN+M+R + ++ A LF KM +P++++Y IL+ G
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Query: 246 LC---RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ R + A LL +M+ +GF+P ++ +LN L
Sbjct: 415 MFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGL 453
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 184/367 (50%), Gaps = 7/367 (1%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A F +A ++P F H + TY ++ LGR + F + +L + E +T F+ I
Sbjct: 221 AFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEM-GEKGLLTMETFSIAI 279
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
K +AE+ +A+ F M ++ K +N +L+ L T + + A +F+ K
Sbjct: 280 KAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAK-LGKEAQAVFEKL-KDRF 337
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
P+ ++Y I++ +C ++ A ++N+M +RG PDV ++ ++++GL + + + A+
Sbjct: 338 TPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIK 397
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L E M KG P+ SYT ++ C++K + EA + M +GC PD Y ++ GF
Sbjct: 398 LFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFG 457
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R+ + +L++M GC P+ +Y L+ + Q M D A + + MI G P
Sbjct: 458 RQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIH 517
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM----IVPQICAGEEMEKLGEV 433
+ ++K + + + +E+ + G P ++++++ ++ Q +GE + L E+
Sbjct: 518 TYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEM 577
Query: 434 LNEIVKV 440
L + +K
Sbjct: 578 LEKGMKA 584
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 36/308 (11%)
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
++++L ++ +PAF F A K G ++++YN MM + +M E
Sbjct: 207 VVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGE 266
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF---------------------- 267
+G++ +E++ I ++ Q +AV + + M GF
Sbjct: 267 KGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKE 325
Query: 268 ------------VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
P +YT LL+ CR K L EA ++ M +G NPD+V +N ++ G
Sbjct: 326 AQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEG 385
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ + DA K+ E M + G PN+ SY ++ C Q + A +Y +M+ +G P
Sbjct: 386 LLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPD 445
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLN 435
++ LI GF K+D +L+E+ + G P T+ ++ + + + +
Sbjct: 446 AALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYK 505
Query: 436 EIVKVEIK 443
++++ IK
Sbjct: 506 KMIQSGIK 513
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 115/291 (39%), Gaps = 41/291 (14%)
Query: 129 TPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TPSL TY I + L + A + + M++ P N +LE L+ + A
Sbjct: 338 TPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKK-SDAI 396
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
LF+ G PN +SY IM++ FC + A F+ M +RG PD Y L+ G
Sbjct: 397 KLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGF 456
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK---------------------- 284
R+ +++ LL++M +G PD +Y L+ + +
Sbjct: 457 GRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTI 516
Query: 285 -------------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
K +++ M KGC PD Y + G R+ R+ +ACK LE+
Sbjct: 517 HTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEE 576
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
M G + Y + G + ++ + M F F VS+ L
Sbjct: 577 MLEKGMKAPKLDYNKFASDISKTGNAVILEELARKM---NFVGKFEVSNVL 624
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 5/212 (2%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS 131
+SD + EI PN R +Y I+I + K + + +
Sbjct: 392 KSDAIKLFEIMKAKGPSPNVR----SYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAA 447
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
L+T LI + D + M E C P + N +++L+ T ++ A ++K
Sbjct: 448 LYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLM-TSQHMPDDAVRIYKK 506
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ P +YN++M+++ + + + ++++M ++G PD SY + + GL R+ +
Sbjct: 507 MIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDR 566
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
A LE+ML KG L Y + + +
Sbjct: 567 SGEACKYLEEMLEKGMKAPKLDYNKFASDISK 598
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 161/341 (47%), Gaps = 12/341 (3%)
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNL-PDRALKTFRSMLEFN--CKPLPKQLN 169
L IL TP F L + +A S+ PD A++ F S+ + + LP N
Sbjct: 121 LTSSILALFPRHGLAFTPRTFPILFERFAMSHRRPDLAIRLFLSLHRSHGIAQDLP-LFN 179
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+L+ LV R + A A + P+ +YN + +C D S A + +M E
Sbjct: 180 SLLDALVKSRRASKAAS--LVRALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVE 237
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF-----VPDTLSYTTLLNSLCRK 284
G+ P +Y I+++G R Q+ A D M +G PD +SYTT+L+ L
Sbjct: 238 SGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVA 297
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
+L +A K+ M ++GC P YN ++ C++G DA V +DM G +PN+V+Y
Sbjct: 298 GQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTY 357
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
L+ GLC G A K + M S+G P+ + LI+ G++++ + E + K
Sbjct: 358 TVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSK 417
Query: 405 AGEA-PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
E P++DT+ +I+ + + E + +V++ +G
Sbjct: 418 GEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRG 458
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 41/193 (21%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D+A K F M CKP N ++++ N L A +F + G +PN +Y +
Sbjct: 301 DKARKVFDEMSIEGCKPSTATYNALIQVTCKKGN-LEDAVAVFDDMVRKGYIPNVVTYTV 359
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE------ 260
++R C G + A L ++M G P+V++Y +L++ + ++ + +DL E
Sbjct: 360 LIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGE 419
Query: 261 ---------------------------------DMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+M+++G++P + +LN L
Sbjct: 420 ECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGN- 478
Query: 288 REAYKLLCRMKVK 300
+E + L RM+ K
Sbjct: 479 QELSRELLRMQEK 491
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 180/369 (48%), Gaps = 8/369 (2%)
Query: 60 GSPCRVQKLIASQ------SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSL 113
G RV + +Q +D + A IF +A Q +RHS +Y ++ LG+AK F L
Sbjct: 189 GKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRL 248
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+ +++ + V+ + +I+ A + A+ FR++ ++ +N +++
Sbjct: 249 MWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMD 308
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
LV + + A ++F+ K + N S+N+++ +C + A+ + ++ + G+
Sbjct: 309 ALVKEAS-VEDAHNVFREL-KCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLE 366
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV SY ++ CR+ +L M +KG P+ +++T ++++L + K++ EA K+
Sbjct: 367 PDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKV 426
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+MK +GC PD Y++++ + GR D +++EDM G P++++Y TL+ C
Sbjct: 427 YEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACA 486
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ A + M P H L+K FC ++ +L+ + K + T
Sbjct: 487 HSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGT 546
Query: 414 WVMIVPQIC 422
+ ++V +C
Sbjct: 547 YAILVRGLC 555
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 36/271 (13%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y I R K F +D +L+ + EH P++ T+ I ++A
Sbjct: 371 SYTAFIEAHCREKDFRNVDKVLVQM--EHKGCKPNVITFTIIMHALGK------------ 416
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
KQ+N A +++ K G +P++ Y+ ++ G
Sbjct: 417 --------AKQINE--------------ALKVYEKMKKEGCVPDSSFYSSLIFILGKAGR 454
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ + M ++GV PDV +Y L+ C SQ A+ LL M PD +Y
Sbjct: 455 LTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHP 514
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL CRKK+++ LL M + + Y +V G C G+ AC +M S
Sbjct: 515 LLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKA 574
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+P +++ L L + M + K LM
Sbjct: 575 MVPKDSTFKMLKEELERKSMLEEMKIIENLM 605
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
T+ M+ CK ++LNR LL+ + + G++PNT +Y ++
Sbjct: 371 TYTCMINGYCKE--EKLNRAEMLLIRMK--------------EQGLVPNTNTYTCLIDGH 414
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C G+ AY L + M + G P++ +Y ++ GLC+K + A LL L G D
Sbjct: 415 CKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADK 474
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++YT L++ CR+ ++A + RM G PD+ YN ++ FCR+ + ++ K+ E+
Sbjct: 475 VTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEE 534
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
G LP +Y +++ G C G A K+ M G P ALI G CN K
Sbjct: 535 AVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESK 594
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+DEAC + E ++ G +P E T V + + C
Sbjct: 595 LDEACQLYETMIDNGLSPCEVTRVTLAYEYC 625
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 201/440 (45%), Gaps = 26/440 (5%)
Query: 29 LIFC--YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYAS 86
L+ C Y +S PSSP E I+ + V +A ++ +++ F++
Sbjct: 72 LLVCESYQQTSFSKPSSPSLNLE--INPNSLTHEQVITVVASLAQEAGSVVSLSFFNWVI 129
Query: 87 RQPNFRHSNSTYLILIL------KLGRA--------KYFSLID------DILITLKSEHY 126
FRH Y++ L RA + FS I +++I +++
Sbjct: 130 GFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGL 189
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+ + ++I + D A K F ML+ P +++ + +
Sbjct: 190 VLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSY-KLMVVGYCRMGRISDVD 248
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
K + G + + +M+ F G ++ A+ F K + G+ P++ ++ L+ GL
Sbjct: 249 RWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGL 308
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPD 305
C+ + +A ++LE+M+ KG+ P+ ++T L++ LC+K +A++L ++ + P+
Sbjct: 309 CKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 368
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y ++ G+C+E + A +L M G +PN +Y L+ G C G F A + M
Sbjct: 369 VYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMD 428
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
LM +GF+P+ +A+I G C G+ EA +L LK+G + T+ +++ + C
Sbjct: 429 LMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQT 488
Query: 426 EMEKLGEVLNEIVKVEIKGD 445
+ ++ + + + KV ++ D
Sbjct: 489 DNKQALAIFSRMFKVGLQPD 508
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 131/286 (45%), Gaps = 5/286 (1%)
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
++S++Y P+++TY +I Y + +RA M E P +++
Sbjct: 360 VRSDNYK--PNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKA 417
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
N+ R A++L K G PN +YN ++ C G AY L + + G+ D +
Sbjct: 418 GNFGR-AYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVT 476
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
Y IL+ CR++ +A+ + M G PD +Y L+ + CR+KK+ E+ KL
Sbjct: 477 YTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAV 536
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P Y +++ G+CR+G A K M GC P+ ++Y L+ GLC++ D
Sbjct: 537 GLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLD 596
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
A + + MI G SP L +C G A +LE L K
Sbjct: 597 EACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEK 642
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T LI + +AL F M + +P N ++ + + + LF+ A
Sbjct: 477 YTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKK-VEESEKLFEEA 535
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G+LP ++Y M+ +C +G IS A F+KM + G PD +Y L+ GLC +S++
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ A L E M++ G P ++ TL C++ A +L R++ K I NT+
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW---IRTVNTL 652
Query: 313 VLGFCREGRA 322
+ C E +
Sbjct: 653 IRKLCSEKKV 662
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 133/259 (51%), Gaps = 5/259 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF L + G+LPN+ YN ++ GD+ A L + M ++ + PD +Y I
Sbjct: 287 LENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSI 346
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+++GLCR +N A L+ +L V D S+ ++N LCR L A +LL M V+G
Sbjct: 347 VIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRG 406
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V + T++ C++G+ +A +V E M G PNL+ Y +++ G +G FD A
Sbjct: 407 LVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAI 466
Query: 362 KYMQLMISKGFSPHFSVS--HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+ + G F V + LI G+CN GK+D+A + E+ +G T+ ++
Sbjct: 467 LLIDTLRRMGL---FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLIN 523
Query: 420 QICAGEEMEKLGEVLNEIV 438
+C + + E++ +V
Sbjct: 524 SLCKAGHVLQAKELMKMMV 542
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 122/240 (50%), Gaps = 2/240 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
YL AF + + ++ + S+N+++ C + +++ A L M+ RG++PDV ++
Sbjct: 356 YLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFG 415
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ C+ +V A+ + E M+ G P+ L Y +++N ++ A L+ ++
Sbjct: 416 TLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRM 475
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G D+V YNT++ G+C G+ A + +M ++G L + V+Y TL+ LC G A
Sbjct: 476 GL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQA 534
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVP 419
K+ M++M+ +G P + LI F +E + + ++ G P T+ M++P
Sbjct: 535 KELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIP 594
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P++ +YN + FC G++++A +M + + P+V +Y L+ G R + A
Sbjct: 232 VKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAF 291
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L ++++ KG +P+++ Y ++++ L + + A LL M K PD Y+ V+ G
Sbjct: 292 RLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGL 351
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
CR G +A K L+ + + + S+ ++ LC AK+ + M +G P
Sbjct: 352 CRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDV 411
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
LI C GKV+ A V E+++K GE P+
Sbjct: 412 VTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPN 445
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 121/246 (49%), Gaps = 6/246 (2%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
AY + K+ G V ++ + L + + VNR + ++M++ G++ + ++ ++
Sbjct: 112 AYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIY 171
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCL 338
+L ++ +L EA ++ R G P++V +N ++ G + G A K++ M +GC
Sbjct: 172 ALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCS 231
Query: 339 --PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ V+Y + V G C G VA+++ + M+ K P+ L+ G+ VG ++ A
Sbjct: 232 VKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAF 291
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT---RIVEAGI 453
+ +EL++ G P+ + I+ + +ME +L++++ I D IV G+
Sbjct: 292 RLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGL 351
Query: 454 GLEDYL 459
YL
Sbjct: 352 CRNGYL 357
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L +Y +PD + TF ++++ +CK + A +++ K
Sbjct: 399 LANMYVRGLVPD--VVTFGTLIDRHCKD----------------GKVENAIQVYEKMIKT 440
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G PN YN ++ F G A L + + G+ DV +Y L+ G C ++++A
Sbjct: 441 GEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQA 499
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
L +M N G + ++Y TL+NSLC+ + +A +L+ M ++G PD V Y ++
Sbjct: 500 FALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITS 559
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
F ++ + ++ + M G +P+ +Y+T+V
Sbjct: 560 FSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMV 592
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + T+ LI + + + A++ + M++ KP N ++ ++ PA
Sbjct: 407 LVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSF-DPA 465
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + + G L + +YN ++ +C G I A+ LF++M G++ +Y L+
Sbjct: 466 ILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINS 524
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ V +A +L++ M+ +G +PD ++YT L+ S +K E +L M +KG PD
Sbjct: 525 LCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPD 584
Query: 306 IVHYNTVVLGFCRE 319
Y T+V+ +E
Sbjct: 585 RQTYQTMVIPLLQE 598
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF LF G+L + +YN ++ + C G + A L M RG++PD +Y IL+
Sbjct: 499 AFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILIT 558
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+K ++L + M+ KG VPD +Y T++ L +++ + Y
Sbjct: 559 SFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEFDY 605
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 138/258 (53%), Gaps = 2/258 (0%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AFDL+ G+ P+ +Y+ ++ FC G ++ A LFNKM + PDV ++ I
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C++ +V A ++L M+ +G PD ++Y +L++ C K++ +A + M G
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
++ YN ++ GFC+ + +A + ++M +P++V+Y +L+ GLC G A
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391
Query: 362 KYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M +G PH +++ +++ C +VD+A +L ++ G P T+ +++
Sbjct: 392 KLVDEMHDRGV-PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Query: 421 ICAGEEMEKLGEVLNEIV 438
+C G ++ + +++
Sbjct: 451 LCKGGRLKDAQNIFEDLL 468
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 138/257 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A ++ K G+ P+ +Y +M +C ++ A ++FN M + GV +V+SY I
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ G C+ +V+ A++L ++M K +PD ++Y +L++ LC+ K+ A KL+ M +G
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D + YN+++ C+ + A +L M G P++ +Y L+ GLC G A+
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ ++ KG++ +I+GFC+ D+A +L ++ G P+ T+ +I+ +
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL 521
Query: 422 CAGEEMEKLGEVLNEIV 438
+E + ++L E++
Sbjct: 522 FEKDENDMAEKLLREMI 538
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 148/298 (49%), Gaps = 1/298 (0%)
Query: 150 LKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR 209
+ +F +L N P + +IL LV Y + A L + +G+ + ++NI++
Sbjct: 41 VSSFNRILNINPTPPIFEFGKILGSLVKINCY-QTAISLHREMEFNGIASDLVTFNILIN 99
Query: 210 AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
F G ++++F + ++G P+ + L++GLC K Q+++A+ + ++ GF
Sbjct: 100 CFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHL 159
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
+ + Y TL+N LC+ + A +LL R+ K P++V YNT++ C+ +A +
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 219
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+M S G P++V+Y L+ G C G + A MIS+ +P L+ GFC
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
G+V EA VL ++K G P T+ ++ C +++ K + N + + + + +
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF + P+ +++I++ FC G + A + M ++G+ PDV +Y
Sbjct: 247 LNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C QVN+A + M G + SY ++N C+ KK+ EA L M K
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V YN+++ G C+ G+ A K++++M G + ++Y +++ LC D A
Sbjct: 367 IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 426
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M +G P LI G C G++ +A + E+LL G T+ +++
Sbjct: 427 ALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGF 486
Query: 422 CAGEEMEKLGEVLNEI 437
C + +K +L+++
Sbjct: 487 CDNDLFDKALALLSKM 502
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 16/255 (6%)
Query: 152 TFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAF 211
T+ S+++ C L KQ+N+ A +F + + GV N +SYNIM+ F
Sbjct: 303 TYCSLMDGYC--LVKQVNK--------------AKSIFNTMAQGGVTANVQSYNIMINGF 346
Query: 212 CFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
C + A LF +M + ++PDV +Y L+ GLC+ +++ A+ L+++M ++G D
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++Y ++L++LC+ ++ +A LL +MK +G PD+ Y ++ G C+ GR DA + ED
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+ G + +Y ++ G CD +FD A + M G P+ +I +
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDE 526
Query: 392 VDEACGVLEELLKAG 406
D A +L E++ G
Sbjct: 527 NDMAEKLLREMIARG 541
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 144/305 (47%), Gaps = 1/305 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI +++ + F ++L+ +P L +++ L + + A
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCL-KGQIHQALHFHDKV 152
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G N Y ++ C G S A L ++ + V P+V Y ++ +C+ V
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
N A DL +M++KG PD ++Y+ L++ C KL +A L +M + NPD+ ++ +
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V GFC+EGR +A VL M G P++V+Y +L+ G C + AK M G
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + + +I GFC + KVDEA + +E+ P T+ ++ +C ++ +
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 433 VLNEI 437
+++E+
Sbjct: 393 LVDEM 397
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 19/256 (7%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LFK H ++P+ +YN ++ C +G IS A L ++M +RGV D +Y ++
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC+ QV++A+ LL M ++G PD +YT L++ LC+ +L++A + + VKG N
Sbjct: 415 ALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNI 474
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ Y ++ GFC A +L M NGC+PN +Y ++ L ++ D+A+K +
Sbjct: 475 TVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLL 534
Query: 365 QLMISKGFSPHFSVSHALI-------------------KGFCNVGKVDEACGVLEELLKA 405
+ MI++G + ++ L G ++GKV+ ELLK
Sbjct: 535 REMIARGLLFGWKKAYCLFTRFFQRRSNLYPPLEVRSGHGSIDLGKVEHGPESKSELLKG 594
Query: 406 GEAPHEDTWVMIVPQI 421
+ ++ +VP +
Sbjct: 595 LSYSADTHFLNMVPGL 610
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + V PN YN ++ + C ++ A+ L+++M +G+ PDV +Y L+
Sbjct: 180 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALIS 239
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C ++N A+ L M+++ PD +++ L++ C++ +++EA +L M +G P
Sbjct: 240 GFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+V Y +++ G+C + A + M G N+ SY ++ G C D A
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED-TWVMIVPQICA 423
+ M K P ++LI G C GK+ A +++E+ G PH+ T+ I+ +C
Sbjct: 360 KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG-VPHDKITYNSILDALCK 418
Query: 424 GEEMEKLGEVLNEIVKVEIKGD 445
+++K +L ++ I+ D
Sbjct: 419 NHQVDKAIALLTKMKDEGIQPD 440
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A ++F+ G +Y +M++ FC N A L +KM + G +P+ ++Y I
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFV 268
++ L K + + A LL +M+ +G +
Sbjct: 517 IILSLFEKDENDMAEKLLREMIARGLL 543
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 144/291 (49%), Gaps = 1/291 (0%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D A+ F ML P Q N+IL+ ++Y A L G+ P+ + NI
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY-STAVSLSHRLELKGIQPDLITLNI 99
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
++ FC G I+ +++ K+ +RG PD + L++GLC K QV +A+ + +L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
F + +SY TL+N +C+ R A KLL ++ + P++V Y+T++ C+ +A
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+ +M G ++V+Y TL+ G C +G A + M+ K +P+ + L+
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C GKV EA VL +LKA P T+ ++ E++K V N +
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ P+ + NI++ FC G I+ +++ K+ +RG PD ++ L+ GLC K QVN+A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+ + +L +GF + +SY TL+N +C+ R A KLL ++ + PD+V YNT++
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
C+ A + +M G ++V+Y TL+ G C G A + M+ K +P+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
Query: 376 FSVSHALIKGFCNVGK--VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
+ L+ C GK +DE+ +L ++ G + T+ +I+ + +E +K+ ++
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195
Query: 434 LNEIV 438
L+E++
Sbjct: 1196 LHEMI 1200
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ LF G+ + +Y+ ++ FC G + A L N+M + + P+V +Y IL+
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC++ +V A +L ML PD ++Y+TL++ ++++A + M + G P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D+ Y ++ GFC+ +A + ++M +P +V+Y +L+ GLC G +
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G + +LI G C G +D A + ++ G P+ T+ +++ +C G
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457
Query: 425 EEMEKLGEVLNEIV 438
++ EV +++
Sbjct: 458 GRLKDAQEVFQDLL 471
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 121/230 (52%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
V P+ +Y+ +M + ++ A +FN M GV PDV +Y IL+ G C+ V+ A+
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+L ++M K VP ++Y++L++ LC+ ++ + L+ M +G +++ Y++++ G
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G A + M G PN ++ L+ GLC G A++ Q +++KG+ +
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEE 426
+ +I G C G ++EA +L ++ G P T+ +I+ + +E
Sbjct: 480 YTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 3/263 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A L + PN +YNI++ A C G + A ++ M + V PDV +Y
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G +V +A + M G PD +YT L+N C+ K + EA L M K
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P IV Y++++ G C+ GR ++++M G N+++Y +L+ GLC G D A
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAI 429
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M +G P+ L+ G C G++ +A V ++LL G + T+ +++
Sbjct: 430 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGH 489
Query: 422 CAGEEMEKLGEVLNEIVKVEIKG 444
C +E E L + K+E G
Sbjct: 490 CKQGLLE---EALTMLSKMEDNG 509
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 192/433 (44%), Gaps = 25/433 (5%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLA-KEIFDYASRQPNF 91
+SS Q S S Q SI N + R+ L + P++ +I D ++ ++
Sbjct: 18 FSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRM--LCMRHTPPIIQFNKILDSFAKMKHY 75
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDR-AL 150
+ S L LK + +L +ILI +T F+ L KI PD L
Sbjct: 76 STAVSLSHRLELKGIQPDLITL--NILINCFCHMGQITFG-FSVLAKILKRGYPPDTVTL 132
Query: 151 KTF----------RSMLEFNCKPLPK--QLNRI----LELLVTHRNYLRPAFDLFKSAHK 194
T + L F+ K L + QLN++ L V R A L +
Sbjct: 133 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDG 192
Query: 195 HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
PN Y+ ++ A C +S AY LF++M +G+ DV +Y L+ G C + ++
Sbjct: 193 RLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKE 252
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC-NPDIVHYNTVV 313
A+ LL +M+ K P+ +Y L+++LC++ K++EA +L M +K C PD++ Y+T++
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLM 311
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+ A V M G P++ +Y L+ G C M D A + M K
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P +LI G C G++ +++E+ G+ + T+ ++ +C +++ +
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431
Query: 434 LNEIVKVEIKGDT 446
N++ I+ +T
Sbjct: 432 FNKMKDQGIRPNT 444
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLR 183
+ P+++TY L+ + A ML+ KP + +++ LV ++
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE---VK 321
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A +F + GV P+ +Y I++ FC N + A LF +M ++ ++P + +Y L+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ ++ DL+++M ++G + ++Y++L++ LC+ L A L +MK +G
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P+ + ++ G C+ GR DA +V +D+ + G N+ +Y ++ G C QG+ + A
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTM 501
Query: 364 MQLMISKGFSP 374
+ M G P
Sbjct: 502 LSKMEDNGCIP 512
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 97/164 (59%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LFK H+ ++P +Y+ ++ C +G I + L ++M +RG +V +Y L+
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLID 417
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ ++RA+ L M ++G P+T ++T LL+ LC+ +L++A ++ + KG +
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL 477
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV 348
++ YN ++ G C++G +A +L M NGC+P+ V++ ++
Sbjct: 478 NVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
S A +L +++ +G+ PD+ + IL+ C Q+ +L +L +G+ PDT+++TTL
Sbjct: 943 STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N LC K ++ +A ++ +G + V Y T++ G C+ G A K+L +
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P++V Y T++ LC + A M KG S + LI GFC VGK+ EA G
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
+L +++ P+ T+ ++V +C E + L E L+ + K+E G
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCK-EGKDLLDESLSMLSKMEDNG 1168
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
VTP + TY LI + ++ + D AL F+ M + N P + +++ L +
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK-SGRIPYV 393
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+DL H G N +Y+ ++ C NG + A LFNKM ++G+ P+ ++ IL+ G
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ A ++ +D+L KG+ + +Y +++ C++ L EA +L +M+ GC PD
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513
Query: 306 IVHYNTVVLGFCRE 319
V + +++ ++
Sbjct: 514 AVTFEIIIIALFKK 527
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 285 KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSY 344
K A L R+++KG PD+ N ++ FC G+ +L + G P+ +++
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 345 RTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
TL+ GLC +G + A + ++++GF + LI G C +G A +L ++
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 405 AGEAPHEDTWVMIVPQICAGEEMEK 429
P + I+ +C + + K
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSK 1084
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 87 RQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLP 146
Q N TY LI L ++ + D++ + P ++ LI ++
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
DRA+ F M + +P +L+ L L+ A ++F+ G N +YN+
Sbjct: 426 DRAIALFNKMKDQGIRPNTFTFTILLDGLCK-GGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
M+ C G + A T+ +KM + G +PD ++ I++ L +K +
Sbjct: 485 MIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529
>gi|297604045|ref|NP_001054898.2| Os05g0207200 [Oryza sativa Japonica Group]
gi|218196267|gb|EEC78694.1| hypothetical protein OsI_18845 [Oryza sativa Indica Group]
gi|222630569|gb|EEE62701.1| hypothetical protein OsJ_17504 [Oryza sativa Japonica Group]
gi|255676129|dbj|BAF16812.2| Os05g0207200 [Oryza sativa Japonica Group]
Length = 467
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 176/395 (44%), Gaps = 44/395 (11%)
Query: 85 ASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESN 144
+S P FR+S Y I++ KL A+ F ++ +L L S P P L +I Y +
Sbjct: 44 SSPAPPFRYSLRCYDIIVCKLAAARLFPAMESVLARLPSSLRPREP-LLCRVISAYGRAR 102
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
L A + + F + LN +L L+ R P +L G+ P+ +Y
Sbjct: 103 L-PAAARRAFAHPAFPAPRTARALNTLLHALLACRA---PLPELLSECRGSGIHPDACTY 158
Query: 205 NIMMRAFCFN-GDISIAYTLFNKMFERGVMPDV-----------------ESYRI----- 241
NI+MRA + G + A LF++M +RG+ P V E++++
Sbjct: 159 NILMRAAVADSGSVDNACLLFDEMLQRGIAPTVVTFGTLVTAFCEAGRLEEAFKVKEVMS 218
Query: 242 --------------LMQGLCRKSQVNRAVDLLEDML-NKGFVPDTLSYTTLLNSLCRKKK 286
LM+ LC K +V+ A L E+M+ N + D+ +Y TL +L R K
Sbjct: 219 LQYNIRPNAHVYASLMKALCEKGKVDDAHRLKEEMVSNSEPLVDSGAYATLARALFRLGK 278
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC-KVLEDMPSNGCLPNLVSYR 345
E LL MK KG +N+++ GFC + +DA L+DM GC P+ VSY
Sbjct: 279 KGEVVSLLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYN 338
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
TLVGGLC G + A + ++ M +G P L G C+ G EA V E++
Sbjct: 339 TLVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFK 398
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKV 440
G AP +D V I + L VL ++ V
Sbjct: 399 GFAPSKDGVRKFVAWIEREGDAASLESVLCQLASV 433
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + + G+ + +N M+ FC + GD+ A+ + M + G PD SY L+ GL
Sbjct: 285 LLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNTLVGGL 344
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C+ + A +L+EDM +G PD ++Y L + +C EA ++ M KG P
Sbjct: 345 CKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFKGFAPSK 404
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
V REG A VL + S L + + + G L D
Sbjct: 405 DGVRKFVAWIEREGDAASLESVLCQLASVNALESSEWEKAMSGVLHD 451
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 154/306 (50%), Gaps = 3/306 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
PS+ T+ L+ + + AL F M+ KP N I++ L + + A D
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ-VDNALD 207
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
L K G+ P+ +YN ++ C +G S A + + M +R + PDV ++ L+
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ +V+ A + E+M+ + PD ++Y+ L+ LC +L EA ++ M KGC PD+V
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ G+C+ + K+ +M G + N V+Y L+ G C G +VA++ + M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G P+ + L+ G C+ GK+++A +L ++ K G T+ +I+ +C E+
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 428 EKLGEV 433
++
Sbjct: 448 ADAWDI 453
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D +L F M++ C+PLP +R+L + + Y + L++ G+ N +
Sbjct: 63 DDSLDLFFHMVQ--CRPLPSIADFSRLLSAISKMKKYDVVIY-LWEQMQMLGIPHNLCTC 119
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI++ FC +S+A + KM + G P + ++ L+ G CR +V A+ + + M+
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ P+ + Y T+++ LC+ K++ A LL RM+ G PD+V YN+++ G C GR D
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +++ M P++ ++ L+ +G A+++ + MI + P LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
G C ++DEA + ++ G P T+ +++ C +++E
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A K G P+ ++ ++ FC + A +F++M G P+V Y
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GLC+ QV+ A+DLL M G PD ++Y +L++ LC + +A +++ M +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ +N ++ +EGR +A + E+M P++V+Y L+ GLC D A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M+SKG P LI G+C KV+ + E+ + G + T+ +++
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++ E+ +V
Sbjct: 372 CRAGKLNVAEEIFRRMV 388
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 126/261 (48%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F G PN YN ++ C + + A L N+M + G+ PDV +Y L+
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + + A ++ M + PD ++ L+++ ++ ++ EA + M + +P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV Y+ ++ G C R +A ++ M S GC P++V+Y L+ G C + K
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G + LI+G+C GK++ A + ++ G P+ T+ +++ +C
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
++EK +L ++ K + D
Sbjct: 410 GKIEKALVILADMQKNGMDAD 430
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +FT+ LI + A + + M+ + P + ++ L + L A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR-LDEA 310
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F G P+ +Y+I++ +C + + LF +M +RGV+ + +Y IL+QG
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
CR ++N A ++ M+ G P+ ++Y LL+ LC K+ +A +L M+ G + D
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
IV YN ++ G C+ G DA + + G +P++ +Y T++ GL +G+ A +
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Query: 366 LMISKGFSPH 375
M G P+
Sbjct: 491 KMKEDGILPN 500
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 126/257 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L + DLF + LP+ ++ ++ A + L+ +M G+ ++ + I
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR SQ++ A+ L M+ G P +++ +LLN CR ++ +A + +M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P++V YNT++ G C+ + +A +L M +G P++V+Y +L+ GLC G + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M + P +ALI G+V EA EE+++ P T+ +++ +
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 422 CAGEEMEKLGEVLNEIV 438
C +++ E+ +V
Sbjct: 302 CMYSRLDEAEEMFGFMV 318
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
LF M + +P + + L+ + + + + + L E M G + + LLN C
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
R +L A L +M G P IV + +++ GFCR R DA + + M G PN+V
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
Y T++ GLC D A + M G P ++LI G C+ G+ +A ++ +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 403 LKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
K P T+ ++ + + E E+++ + D
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
F R + YR +++ R +++ ++DL M+ +P ++ LL+++ + KK
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
L +M++ G ++ N ++ FCR + A L M G P++V++ +L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 348 VGGLC-DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ G C ++D + Q M+ G+ P+ + + +I G C +VD A +L + K G
Sbjct: 158 LNGFCRGDRVYDALYMFDQ-MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
P T+ ++ +C+ +++ + K EI D A I
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 4/321 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY ++ ++ D+A R M++ +P I+ ++ A
Sbjct: 295 VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESA 354
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ G++P ++N M + C +G A +F M +G MPD+ SY IL+ G
Sbjct: 355 -KMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHG 413
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + +L M +KG V + + L+++ ++ + EA + M+ +G PD
Sbjct: 414 YATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPD 473
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V Y+T++ FCR GR DA + M S G PN V Y +L+ G C G AK+ +
Sbjct: 474 VVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVS 533
Query: 366 LMISKGF-SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+SKG P+ ++I CN G+V +A V ++ G+ P T+ ++ C
Sbjct: 534 EMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV 593
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+MEK VL+ +V V I+ D
Sbjct: 594 GKMEKAFGVLDAMVSVGIEPD 614
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 3/295 (1%)
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG--VLPNTKSYNIMMRAFCF 213
M + C P N +++ L + A D+ + K G P+ S+N ++ F
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRS-QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 276
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G++S A L N+M ++GV PDV +Y ++ LC+ +++A +L M++KG PD L+
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
YT +++ +E+ K+ +M KG P IV +N+ + C+ GR+ DA ++ + M
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
+ G +P+LVSY L+ G +G F M KG + + LI G +D
Sbjct: 397 TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMD 456
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
EA V E+ G P T+ ++ C + E ++++ + ++ +T +
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVV 511
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 3/326 (0%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLI 137
A+EIF Y + + + S Y IL+ F+ ++++ ++ + F LI
Sbjct: 388 AEEIFQYMTTKGHMPDLVS-YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446
Query: 138 KIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGV 197
+A+ + D A+ F M +P + ++ L A + F G+
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFC-RMGRLADAMEKFSQMISIGL 505
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV-MPDVESYRILMQGLCRKSQVNRAV 256
PNT Y+ ++ FC +GD+ A L ++M +G+ P++ + ++ LC + +V A
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAH 565
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
D+ +++ G P +++ +L++ C K+ +A+ +L M G PD+V YNT+V G+
Sbjct: 566 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGY 625
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G+ D + +M P V+Y ++ GL G AKK MI G +
Sbjct: 626 CKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDI 685
Query: 377 SVSHALIKGFCNVGKVDEACGVLEEL 402
L+KG C DEA + +L
Sbjct: 686 DTYKILLKGLCRNDLTDEAITLFHKL 711
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 141/276 (51%), Gaps = 1/276 (0%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R + A +F GV P+ +Y+ ++ AFC G ++ A F++M G+ P+
Sbjct: 452 RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVV 511
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGF-VPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
Y L+ G C + +A +L+ +M++KG P+ + ++++++SLC + ++ +A+ + +
Sbjct: 512 YHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G P IV +N+++ G+C G+ A VL+ M S G P++V+Y TLV G C G
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D + M+ K P ++ G + G+ A + E++ +G A DT+ ++
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
+ +C + ++ + +++ ++ K D I+ I
Sbjct: 692 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVI 727
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD-L 258
+ +Y I+M C + F ++ G+ ++ LC + + AVD L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVVLGF 316
L M + G VP+ +SY T++ SLC + +EA ++ RM +G C+PD+V +NTV+ GF
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
++G AC ++ +M G P++V+Y ++V LC D A+ ++ M+ KG P
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
A+I G+ G E+ + ++ G P T+ + +C
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLC 380
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Query: 212 CFNGDISIAYTLFNKMFERGVMP-----DVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
C NG ++ LFN++ P V +Y ILM CR + + +L G
Sbjct: 128 CSNGP-ALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAG 186
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYK-LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
T+ T L LC K+ EA LL RM GC P+ + YNTV+ C + R+ +A
Sbjct: 187 LRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEA 246
Query: 326 CKVLEDMPSNG--CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
+++ M G C P++VS+ T++ G QG A + M+ KG P ++++
Sbjct: 247 LDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIV 306
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI-CAGEEME 428
C +D+A VL +++ G P T+ I+ C+G E
Sbjct: 307 DALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKE 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+F G P ++N ++ +C G + A+ + + M G+ PDV +Y L+
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVS 623
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ +++ + L +ML+K P T++Y+ +L+ L + A K+ M G
Sbjct: 624 GYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI Y ++ G CR +A + + + C ++ T++ L + A
Sbjct: 684 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLF 743
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ + G P+ S +I G V+EA + + K+G AP I+ +
Sbjct: 744 AAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 803
Query: 425 EEMEKLGEVLNEI 437
++ K G ++++
Sbjct: 804 GDIVKAGYYMSKV 816
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF + + G+ P+ +YN ++ +C +G I LF +M + V P +Y I
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ GL + + A + +M++ G D +Y LL LCR EA L ++
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C DI NTV+ + R +A + + ++G +PN+ +Y ++ L +G + A
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M G +P + + +I+ G + +A
Sbjct: 776 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 3/272 (1%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
H P++ T+ LI Y ++A +M+ +P N ++ +
Sbjct: 573 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCK-SGKI 631
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
LF+ V P T +Y+I++ G S A +F++M + G D+++Y+IL
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
++GLCR + A+ L + D T++N+L + ++ EA L + G
Sbjct: 692 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGL 751
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
P++ Y ++ +EG +A + M +GC P+ ++ L +G A
Sbjct: 752 VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 811
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
YM + S S + L+ F + GK E
Sbjct: 812 YMSKVDGTIISLEASTTSLLMSLFSSKGKHRE 843
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 182/369 (49%), Gaps = 21/369 (5%)
Query: 42 SSPEQQQESSIS-----NSKSPIGSPCRVQ---KLIASQSDPLLAKEIFDYASRQPNFRH 93
+SP+ + SS S +SK+P+ S + + L+ S+ DP EI AS P+
Sbjct: 19 ASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCHI 78
Query: 94 SNSTYLILILKLGRAKYFSLIDDIL-------ITLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ + L K+FS + ++L LKSE + + I +YA++N+
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRQDLKSERFA------AHAIVLYAQANML 132
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D +L+ FR + +F K LN +L + ++Y + +G+ P+ ++YN
Sbjct: 133 DHSLRVFRDLEKFEIPRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M++ FC +G S +Y++ +M +G+ P+ S+ +++ G + + + +L M ++G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYSEDKNDEVGKVLVMMKDRG 252
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+Y + SLC++KK +EA LL M G P+ V Y+ ++ GFC E +A
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAK 312
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K+ + M + GC P+ Y TL+ LC G F+ A + + K + P FS+ +L+ G
Sbjct: 313 KLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPSFSIMKSLVNGL 372
Query: 387 CNVGKVDEA 395
KVDEA
Sbjct: 373 AKDSKVDEA 381
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PNT +Y+ ++R FC D A LF M RG PD E Y L+ LC+ A
Sbjct: 287 GMKPNTVTYSHLIRGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ L ++ + K +VP +L+N L + K+ EA +L+ ++K K
Sbjct: 347 LVLCKESMEKNWVPSFSIMKSLVNGLAKDSKVDEAKELIGQVKEK 391
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 235 DVESYRILMQGLCRKSQVN---RAVDLLEDMLNKGFVPDTL-SYTTLLNSLCRKKKLREA 290
D++S R + +Q N ++ + D L K +P T+ S LL + K +EA
Sbjct: 112 DLKSERFAAHAIVLYAQANMLDHSLRVFRD-LEKFEIPRTVKSLNALLFACLVAKDYKEA 170
Query: 291 YKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
++ M K+ G PD+ YN ++ FC G A + ++ +M G PN S+ ++
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G + D K + +M +G + S + I+ C K EA +L+ +L AG P
Sbjct: 231 GFYSEDKNDEVGKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ T+ ++ C ++ E+ ++ +V K D+
Sbjct: 291 NTVTYSHLIRGFCNEDDFEEAKKLFKVMVNRGCKPDS 327
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+ +L+ +K + S + I+ + A ML KP + ++
Sbjct: 241 VGKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIR 300
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
++ A LFK G P+++ Y ++ C GD A L + E+ +
Sbjct: 301 GFCNEDDF-EEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWV 359
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLL 259
P + L+ GL + S+V+ A +L+
Sbjct: 360 PSFSIMKSLVNGLAKDSKVDEAKELI 385
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 164/333 (49%), Gaps = 9/333 (2%)
Query: 121 LKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE------FNCKPLPKQLNRIL 172
L+ + TP+ TY LIK ++ + ALK + ML NCKP + I+
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
+ L A +LF+ G++P+ SY+ ++ FC G + LF++M ++GV
Sbjct: 245 DGLC-KVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PD+ ++ +L+ LC++ +V A LLE M+ +G VP+ ++Y +L++ C L A +
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE 363
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
L M KG PD + Y T++ G+C+ + +A + +M G PN+ +Y TL+ GL
Sbjct: 364 LFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
+G AKK +M + G S + + + G C + EA + EL + +
Sbjct: 424 QKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE 483
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ ++ +C ++E E+ ++ + ++ D
Sbjct: 484 NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPD 516
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 183/369 (49%), Gaps = 6/369 (1%)
Query: 77 LAKEIFDYASRQP-NFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY 135
L KE+ + AS+ N + TY I+I L + ++ +K++ + P + +Y
Sbjct: 218 LHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQG--MIPDVISY 275
Query: 136 --LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAH 193
LI + + D++ F M++ +P + +++ L + A L +
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC-KEGKVTEAKKLLEVMI 334
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
+ G++PN +YN ++ FC GD++ A LF M +G+ PD SY L+ G C+ +V
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++L +ML G P+ +Y TLL L +K K+ +A KL MK G + + Y +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G C+ +A ++ ++ S N+ +Y L+ GLC G + A + + + +G
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEV 433
P + +I GFC VG+VD A + E++ + G P + ++ C G ++E++ ++
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 434 LNEIVKVEI 442
L+++V+ ++
Sbjct: 575 LHKMVQKDV 583
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 138/258 (53%), Gaps = 12/258 (4%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
FDL +H +P S+N ++ S ++L+N+M G+ PD+ + IL
Sbjct: 79 FDLMMRSHP---IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANC 135
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++V+ A+ + +L +G++P+ ++YTTL+ LC + ++ EA +L RM+ GC P+
Sbjct: 136 LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPN 195
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNG------CLPNLVSYRTLVGGLCDQGMFDV 359
V Y T++ G C+ G A K+ ++M ++ C P +++Y ++ GLC G D
Sbjct: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDE 255
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
AK+ + M ++G P LI GFC GK D++ + +E++ G P T+ +++
Sbjct: 256 AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLID 315
Query: 420 QICAG---EEMEKLGEVL 434
+C E +KL EV+
Sbjct: 316 TLCKEGKVTEAKKLLEVM 333
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A F M+ + P NR+L L +Y + F L+ G+ P+ + +I+
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQ-LFSLYNEMRLAGLSPDLFTLSIL 132
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
C +S A + RG +P+V +Y L++GLC + +++ A L M G
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG------CNPDIVHYNTVVLGFCREGR 321
P+ ++Y TL+ LC+ + A KL M C P ++ Y+ ++ G C+ GR
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
+A ++ E+M + G +P+++SY TL+ G C G +D +K M+ +G P
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312
Query: 382 LIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
LI C GKV EA +LE +++ G P+ T+ ++ C
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 8/242 (3%)
Query: 212 CFNGDISI--AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
C G+I+ A+ F+ M +P + S+ L+ GL + + ++ L +M G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D + + L N LC ++ EA + + +G P++V Y T++ G C E R +A ++
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS------PHFSVSHALI 383
M GC PN V+Y TL+ GLC G ++A K + M++ P +I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
G C VG+ DEA + EE+ G P ++ ++ C + ++ + +E+V ++
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 444 GD 445
D
Sbjct: 305 PD 306
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A++LF+ + G+ P+ +YNIM+ FC G + A LF KM E G PD+ +Y
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ G C +++ + LL M+ K P+ S T +++ LC+ +K ++ LL + V+
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 168/342 (49%), Gaps = 8/342 (2%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
GR + ++ DI+ ++ V P +TY LI + + A M E P
Sbjct: 285 GRVEGARMVLDIM-----KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
N +++ ++ L AF + +LP +YN+++ A G + A +
Sbjct: 340 TAVTYNTLIDGYC-NKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
M + G++PD +Y IL+ G CR +A +L ++M++KG P ++YT+L+ L +
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSK 458
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ +++ A L ++ +G +PD++ +N ++ G C G A +L++M +P+ V+
Sbjct: 459 RNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVT 518
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y TL+ G C +G + A++ ++ M +G P + LI G+ G +++A + +E+L
Sbjct: 519 YNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML 578
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
G P T+ ++ +C ++ + E+L E+V I D
Sbjct: 579 SIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 175 LVTHRNYLRPAFD----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
L+ H +L D + K G++P++ +YNI++ +C G+ A+ L ++M +
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK 440
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G+ P + +Y L+ L +++++ A DL E ++ +G PD + + L++ C L A
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
+ LL M + PD V YNT++ G CREG+ +A ++L++M G P+ +SY TL+ G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G + A M+S GF+P +ALI+G C + D A +L+E++ G P
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620
Query: 411 EDTWVMIVPQI 421
+ T+ ++ I
Sbjct: 621 DSTYFSLIEGI 631
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 3/213 (1%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ AF+L G+ P +Y ++ + A LF K+ G PD+ + L
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNAL 487
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ G C ++RA LL++M + VPD ++Y TL+ CR+ K+ EA +LL MK +G
Sbjct: 488 IDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGI 547
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PD + YNT++ G+ + G DA + ++M S G P L++Y L+ GLC D+A++
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE 607
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
++ M+SKG +P S +LI+G +GKVD++
Sbjct: 608 LLKEMVSKGITPDDSTYFSLIEG---IGKVDDS 637
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 153/348 (43%), Gaps = 36/348 (10%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F ++ ++ + N + + M K N ++ +L L+ A D S
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCK-EGKLKKAKDFIGSM 262
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
GV PN +YN ++ +C G + A + + M RGV PD +Y L+ G+C+ ++
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK---------------------------- 284
A +LE M G +P ++Y TL++ C K
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382
Query: 285 -------KKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
K+ EA ++ M G PD + YN ++ G+CR G A A + ++M S G
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P LV+Y +L+ L + A + +I +G SP + +ALI G C G +D A
Sbjct: 443 QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA 502
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+L+E+ K P E T+ ++ C ++E+ E+L E+ + I+ D
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPD 550
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 133/259 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF+ F + GV+P +++N M+ F + L+ +MF + V ++ I++
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMIN 244
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC++ ++ +A D + M N G P+ ++Y T+++ C + ++ A +L MK +G P
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP 304
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D Y +++ G C+ G+ +A +LE M G LP V+Y TL+ G C++G A Y
Sbjct: 305 DSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYR 364
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+ + P S + LI GK+DEA G+++++ +G P T+ +++ C
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC 424
Query: 425 EEMEKLGEVLNEIVKVEIK 443
+K + +E++ I+
Sbjct: 425 GNAKKAFNLHDEMISKGIQ 443
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
+F LI+ E D A + F M E P + N +L L + N + L+
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLK-LNQTETVWVLYAE 226
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + ++NIM+ C G + A M GV P+V +Y ++ G C + +
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
V A +L+ M N+G PD+ +Y +L++ +C+ KL EA +L +MK G P V YNT
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C +G + A ++M LP + +Y L+ L +G D A ++ M G
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + LI G+C G +A + +E++ G P T+ ++ + M+
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 432 EVLNEIVK 439
++ +I++
Sbjct: 467 DLFEKIIR 474
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY LI L + DD+ + E +F LI + + DRA + M
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ N P N +++ + A +L K + G+ P+ SYN ++ + GD
Sbjct: 508 DKRNIVPDEVTYNTLMQGRC-REGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
I+ A+T+ ++M G P + +Y L+QGLC+ Q + A +LL++M++KG PD +Y +
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626
Query: 277 LLNSLCRKKKLREA 290
L+ + + EA
Sbjct: 627 LIEGIGKVDDSSEA 640
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 180/369 (48%), Gaps = 8/369 (2%)
Query: 60 GSPCRVQKLIASQ------SDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSL 113
G RV + +Q +D + A IF +A Q +RHS +Y ++ LG+AK F L
Sbjct: 166 GKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRL 225
Query: 114 IDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
+ +++ + V+ + +I+ A + A+ FR++ ++ +N +++
Sbjct: 226 MWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMD 285
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
LV + + A ++F+ K + N S+N+++ +C + A+ + ++ + G+
Sbjct: 286 ALVKEAS-VEDAHNVFREL-KCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLE 343
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
PDV SY ++ CR+ +L M +KG P+ +++T ++++L + K++ EA K+
Sbjct: 344 PDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKV 403
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+MK +GC PD Y++++ + GR D +++EDM G P++++Y TL+ C
Sbjct: 404 YEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACA 463
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ A + M P H L+K FC ++ +L+ + K + T
Sbjct: 464 HSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGT 523
Query: 414 WVMIVPQIC 422
+ ++V +C
Sbjct: 524 YAILVRGLC 532
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 36/271 (13%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y I R K F +D +L+ + EH P++ T+ I ++A
Sbjct: 348 SYTAFIEAHCREKDFRNVDKVLVQM--EHKGCKPNVITFTIIMHALGK------------ 393
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
KQ+N A +++ K G +P++ Y+ ++ G
Sbjct: 394 --------AKQINE--------------ALKVYEKMKKEGCVPDSSFYSSLIFILGKAGR 431
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ + M ++GV PDV +Y L+ C SQ A+ LL M PD +Y
Sbjct: 432 LTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHP 491
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
LL CRKK+++ LL M + + Y +V G C G+ AC +M S
Sbjct: 492 LLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKA 551
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+P +++ L L + M + K LM
Sbjct: 552 MVPKDSTFKMLKEELERKSMLEEMKIIENLM 582
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 36/368 (9%)
Query: 70 ASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVT 129
A+ ++PL A + +PNF S + L+L L RA+ F+ + +++ P++
Sbjct: 92 AAPAEPLHAARFLAWLRAKPNFSPSAEHFDALLLPLARARLFTHLWTQASDMRALGLPLS 151
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
P+ F+ +I Y S LP++A++ F + F C P+
Sbjct: 152 PATFSAVISSYGHSRLPEQAVEVFNRLPHFGC---PQ----------------------- 185
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
T+ YN ++ A C NG+ + AY L +M +GV PD ++ L+ C
Sbjct: 186 ----------TTEVYNALLDALCSNGNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAS 235
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
++ A L+DM ++GF P L++ L R +L EA R +G PD+ +
Sbjct: 236 GKLREAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATF 295
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
N++ C G A +L D S G P++ +Y+ ++ + G + A + +
Sbjct: 296 NSLAQALCDAGDVKFAVGLLADASSRGLCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVE 355
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
G P S+ A++K C G+ +A ++ G P+ +VM+V G
Sbjct: 356 DGHRPFPSLYAAIVKALCKAGRFGDAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLD 415
Query: 430 LGEVLNEI 437
L E+
Sbjct: 416 AANYLVEM 423
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K GVLP+ ++N + +A C GD+ A L RG+ PD+ +Y++++ + + Q+
Sbjct: 285 KEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRGLCPDISTYKVMLPAVAKAGQIE 344
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A L + G P Y ++ +LC+ + +A+ MK KG P+ Y +V
Sbjct: 345 EAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAFAFFGDMKSKGHPPNRPVYVMLV 404
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
R GR +DA L +M G P + ++ +V GL G D+A++ QL +S
Sbjct: 405 KMCVRGGRFLDAANYLVEMSEAGFAPRVPTFNAVVDGLRHLGKHDLAQRMEQLEMS 460
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 169/348 (48%), Gaps = 24/348 (6%)
Query: 103 LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCK 162
L L RA S I ++ TL S P SL LI A S L A++ FR
Sbjct: 18 LALLRAGRLSAISHVVSTLPSASLP--SSLLRRLIPALASSGLAAAAVR-FR-------- 66
Query: 163 PLPKQLNRILELLVTHR--NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
P+P + +L++HR LRPA L +S+ +T SYN++M F G ++
Sbjct: 67 PVPGDSLSLNSILLSHRALRSLRPALALLRSSES----VDTVSYNVVMSGFSEQGGLA-P 121
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP--DTLSYTTLL 278
L +M +RGV D + ++ GLCR +V+RA L E M+ G + D + + +L+
Sbjct: 122 EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLV 181
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+ C+ + A+ + RMK +G D+V YN++V G CR G A +++ M +G
Sbjct: 182 DGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVE 241
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+V+Y + C + D A + M+ KG P AL+ G C G+ EA +
Sbjct: 242 PNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYAL 301
Query: 399 LEELLKAGEAPHEDTWVMIVPQIC----AGEEMEKLGEVLNEIVKVEI 442
E+ K G AP+ T+ M++ + E + LGEV++ V +++
Sbjct: 302 FREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDL 349
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 168/376 (44%), Gaps = 16/376 (4%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
AK++F +A N + TY +LI L +A + +L + E ++P++ T+
Sbjct: 368 AKDMFRHA-LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM--EEKSISPNVVTFSS 424
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY----LRPAFDLFKS 191
+I + +A R M E P N + V ++ A D++
Sbjct: 425 IINGLVKRGWVGKATDYMREMKERGIDP-----NVVTYGTVIDGSFKCLGQEAALDVYHE 479
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
GV N + ++ NG I A LF +M ERGV+ D +Y L+ GL +
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
+ A + +++ K +PD + Y +N LC K +EA L M+ G PD V YNT
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ REG+ A K+L M + PNL++Y TL+ GL + G + AK + M S G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659
Query: 372 FSPHFSVSHALIKGFCNVG-KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
FSP S++H + C+ G + D + E ++ AG + +V +C K
Sbjct: 660 FSPT-SLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKA 718
Query: 431 GEVLNEIVKVEIKGDT 446
VL E+ I DT
Sbjct: 719 MVVLEEMSGRGIAPDT 734
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 119/235 (50%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+N ++ +C GD+ A+ + +M +GV DV Y L+ GLCR +V+ A D+++ M
Sbjct: 176 GWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTM 235
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
G P+ ++YT + CR+ + +A+ L M KG PD+V + +V G C++GR
Sbjct: 236 KRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRF 295
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A + +M G PN V+Y L+ L + + + ++S+G + AL
Sbjct: 296 SEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ C GK+DEA + L P+ T+ +++ +C ++ +VL+E+
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM 410
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 132/260 (50%), Gaps = 4/260 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A D+ + + GV PN +Y + + +C + A++L+ +M +GV+PDV + L+
Sbjct: 228 ARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVG 287
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC+ + + A L +M G P+ ++Y L+++L + ++ E+ LL + +G
Sbjct: 288 GLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVM 347
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D++ Y ++ C+EG+ +A + S+ PN V+Y L+ LC G D A++ +
Sbjct: 348 DLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVL 407
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI--C 422
M K SP+ ++I G G V +A + E+ + G P+ T+ ++ C
Sbjct: 408 SEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKC 467
Query: 423 AGEE--MEKLGEVLNEIVKV 440
G+E ++ E+L E V+V
Sbjct: 468 LGQEAALDVYHEMLCEGVEV 487
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 117/237 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ AF + + GV + YN ++ C G++ A + + M GV P+V +Y +
Sbjct: 190 METAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTM 249
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ CR++ V+ A L E+M+ KG +PD ++ + L+ LC+ + EAY L M+ G
Sbjct: 250 FIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIG 309
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V Y ++ + R ++ +L ++ S G + +L+ Y L+ LC +G D AK
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +S +P+ LI C G VD A VL E+ + +P+ T+ I+
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSII 426
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
RN + AF L++ + GVLP+ + + ++ C +G S AY LF +M + G P+
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHV 315
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y +L+ L + + N ++ LL +++++G V D + YT L++ LC++ K+ EA +
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
P+ V Y ++ C+ G A +VL +M PN+V++ +++ GL +G
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
A YM+ M +G P+ +I G + A V E+L G
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEG 484
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 5/374 (1%)
Query: 31 FCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPN 90
C S+E+ S E+ Q + + + + Q + L +S +PN
Sbjct: 569 LCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
TY LI+ L A +L + S + T +++ ++ D L
Sbjct: 629 L----ITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M+ N ++ +L + R A + + G+ P+T ++N ++
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLC-YNGMTRKAMVVLEEMSGRGIAPDTITFNALILG 743
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
+G + A++ +++M G+ P+V ++ L+ GL ++ + +L +M +G P
Sbjct: 744 HFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPS 803
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
L+Y L+ ++ EA +L C M KG P + YN ++ F + G A ++
Sbjct: 804 NLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFN 863
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M + G LP +Y LV G +K+++ M KGFSP ++ + F G
Sbjct: 864 EMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPG 923
Query: 391 KVDEACGVLEELLK 404
EA +L+ L K
Sbjct: 924 MSWEARRLLKNLYK 937
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P+L TY LI E+ ++A M P R+L+ R
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS---- 680
Query: 186 FDLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
DL H+ G+ + YN ++R C+NG A + +M RG+ PD ++
Sbjct: 681 -DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G + ++ A + ML G P+ ++ TLL L ++ E+ +L MK +G
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P + Y+ +V G+ ++ ++A ++ +M G LP + +Y L+ GM AK
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ M ++G P L+ G+ + E L+++ + G +P + T
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGT 911
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A L + + PN +Y+ ++ G + A L N+M G P ++R ++Q
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ + + +++ E M+N G D Y TL+ LC R+A +L M +G P
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAP 732
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D + +N ++LG + G +A + M +G PN+ ++ TL+GGL G + +
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVL 792
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M +G P L+ G+ EA + E++ G P T+ ++
Sbjct: 793 NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKV 852
Query: 425 EEMEKLGEVLNEI 437
M + E+ NE+
Sbjct: 853 GMMSQAKELFNEM 865
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 7/293 (2%)
Query: 130 PSLFTYLIKIYAES--NLPDRALKTFRSMLEFNCKP-LPKQLNRILELLVTHRNYLRPAF 186
P TY I A+S +ALK M + KP L I+ L + A
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF--EAGAVEKAK 649
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS-IAYTLFNKMFERGVMPDVESYRILMQG 245
L G P + ++ +++A C G S + + M G+ D+ Y L++
Sbjct: 650 YLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRV 708
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC +A+ +LE+M +G PDT+++ L+ + L A+ +M G +P+
Sbjct: 709 LCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPN 768
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +NT++ G GR ++ VL +M G P+ ++Y LV G Q A +
Sbjct: 769 VATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYC 828
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+ KGF P S +ALI F VG + +A + E+ G P T+ ++V
Sbjct: 829 EMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILV 881
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 270 DTLSYTTLLNSLCRKKKLR-EAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
DT+SY +++ + L EA LL M +G D V NTV++G CR+GR A +
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEA--LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL 159
Query: 329 LEDMPSNGCLPNL--VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
E M G + L V + +LV G C G + A + M ++G ++L+ G
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
C G+VD A +++ + + G P+ T+ M + + C ++ + E+V+ + D
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279
Query: 447 RIVEAGIG 454
+ A +G
Sbjct: 280 VTLSALVG 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,100,289,859
Number of Sequences: 23463169
Number of extensions: 293403090
Number of successful extensions: 911862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6487
Number of HSP's successfully gapped in prelim test: 5020
Number of HSP's that attempted gapping in prelim test: 782648
Number of HSP's gapped (non-prelim): 64540
length of query: 470
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 324
effective length of database: 8,933,572,693
effective search space: 2894477552532
effective search space used: 2894477552532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)