BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012126
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 619 bits (1597), Expect = e-176, Method: Compositional matrix adjust.
Identities = 299/455 (65%), Positives = 361/455 (79%), Gaps = 12/455 (2%)
Query: 20 VTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAK 79
+T P T S YSSS E+ ++ +SN KSPIGSP RVQKLIASQSDPLLAK
Sbjct: 16 LTSPLSTSSRFLFYSSSEHEA-------RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAK 68
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
EIFDYAS+QPNFRHS S++LILILKLGR +YF+LIDD+L +S YP+T +FTYLIK+
Sbjct: 69 EIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV 128
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
YAE+ LP++ L TF MLEFN P PK LNRIL++LV+HR YL+ AF+LFKS+ HGV+P
Sbjct: 129 YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP 188
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
NT+SYN++M+AFC N D+SIAY LF KM ER V+PDV+SY+IL+QG CRK QVN A++LL
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+DMLNKGFVPD LSYTTLLNSLCRK +LREAYKLLCRMK+KGCNPD+VHYNT++LGFCRE
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
RA+DA KVL+DM SNGC PN VSYRTL+GGLCDQGMFD KKY++ MISKGFSPHFSVS
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 368
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
+ L+KGFC+ GKV+EAC V+E ++K GE H DTW M++P IC +E EK+ L + VK
Sbjct: 369 NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVK 428
Query: 440 VEIKGDTRIVEAGIGLEDYLIGKTR-----SRPRR 469
EI GDTRIV+ GIGL YL K + +R RR
Sbjct: 429 EEITGDTRIVDVGIGLGSYLSSKLQMKRKNARERR 463
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 195/357 (54%), Gaps = 4/357 (1%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQ--PNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+P +V KL+ ++ D + +FD A+ + + H S++ ++L+L A F +D++
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+ +K E+ V+ + + + Y + P +L+ F M +F+C P K +L +LV
Sbjct: 75 VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV-E 133
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN-GDISIAYTLFNKMFERGVMPDVE 237
N L AF +K+ + G+ P S N++++A C N G + +F +M +RG PD
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ GLCR +++ A L +M+ K P ++YT+L+N LC K + EA + L M
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
K KG P++ Y++++ G C++GR++ A ++ E M + GC PN+V+Y TL+ GLC +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
A + + M +G P + +I GFC + K EA L+E++ G P+ TW
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 1/216 (0%)
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F+KM + P ++Y ++ L ++Q+N A ++M G P S L+ +LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 283 RKKKLREA-YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
R +A K+ M +GC+PD Y T++ G CR GR +A K+ +M C P +
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
V+Y +L+ GLC D A +Y++ M SKG P+ +L+ G C G+ +A + E
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
++ G P+ T+ ++ +C +++++ E+L+ +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +TY LI D A K F M+E +C P ++ L +N + A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMR 248
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ G+ PN +Y+ +M C +G A LF M RG P++ +Y L+ GLC
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ AV+LL+ M +G PD Y +++ C K REA L M + G P+ +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ + +V GLC Y+ M
Sbjct: 369 TWNI----------------------------HVKTSNEVVRGLCANYPSRAFTLYLS-M 399
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
S+G S +L+K C G+ +A +++E++ G P + TW +++
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNI-------MMRAFCFNGDISIAYTLFNKMFERGVMP 234
R A + G+ PN ++NI ++R C N S A+TL+ M RG+
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISV 406
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+VE+ L++ LC+K + +AV L+++++ G +P ++ L+ K + EA L
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
Query: 295 CR 296
R
Sbjct: 467 LR 468
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 206/417 (49%), Gaps = 39/417 (9%)
Query: 69 IASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPV 128
+ SQ D A +F+ AS++PNF + Y ++L+LGR+ F + IL +KS +
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVT---------- 177
S F LI+ YA+ L D L M+ EF KP NR+L LLV
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 178 ------------------------HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
+ LRPA + + +G++P+ K++ +M+ +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTL 272
GD+ A + +M E G S +++ G C++ +V A++ +++M N+ GF PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ TL+N LC+ ++ A +++ M +G +PD+ YN+V+ G C+ G +A +VL+ M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
+ C PN V+Y TL+ LC + + A + +++ SKG P ++LI+G C
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
A + EE+ G P E T+ M++ +C+ KL E LN + ++E+ G R V
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK---GKLDEALNMLKQMELSGCARSV 470
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 173/346 (50%), Gaps = 6/346 (1%)
Query: 96 STYLILILKLGRAKYFSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTF 153
ST+ +LI L RA L IL+ Y + P FT +++ Y E D AL+
Sbjct: 190 STFNVLIKALCRAH--QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS-AHKHGVLPNTKSYNIMMRAFC 212
M+EF C +N I+ + A + + +++ G P+ ++N ++ C
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFC-KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A + + M + G PDV +Y ++ GLC+ +V AV++L+ M+ + P+T+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y TL+++LC++ ++ EA +L + KG PD+ +N+++ G C A ++ E+M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
S GC P+ +Y L+ LC +G D A ++ M G + + LI GFC K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
EA + +E+ G + + T+ ++ +C +E +++++++
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 167/326 (51%), Gaps = 13/326 (3%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
KLG K + D +IT +P+ TY LI + N + A + R +
Sbjct: 342 KLGEVKEAVEVLDQMIT-----RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N +++ L RN+ R A +LF+ G P+ +YN+++ + C G + A
Sbjct: 397 LPDVCTFNSLIQGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ +M G V +Y L+ G C+ ++ A ++ ++M G ++++Y TL++ L
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C+ +++ +A +L+ +M ++G PD YN+++ FCR G A +++ M SNGC P++
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKG--FSPHFSVSHALIKGFCNVGKVDEACGVL 399
V+Y TL+ GLC G +VA K ++ + KG +PH + +I+G K EA +
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLF 633
Query: 400 EELLKAGEAPHED-TWVMIVPQICAG 424
E+L+ EAP + ++ ++ +C G
Sbjct: 634 REMLEQNEAPPDAVSYRIVFRGLCNG 659
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 3/246 (1%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PNT +YN ++ C + A L + +G++PDV ++ L+QGLC A++L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
E+M +KG PD +Y L++SLC K KL EA +L +M++ GC ++ YNT++ GFC+
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
+ +A ++ ++M +G N V+Y TL+ GLC + A + M MI +G P
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
++L+ FC G + +A +++ + G P T+ ++ +C +E ++L I
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI- 601
Query: 439 KVEIKG 444
++KG
Sbjct: 602 --QMKG 605
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P FTY LI D AL + M C N +++ N R A +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKTREAEE 491
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+F HGV N+ +YN ++ C + + A L ++M G PD +Y L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R + +A D+++ M + G PD ++Y TL++ LC+ ++ A KLL +++KG N
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 308 HYNTVVLGFCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGM-FDVAKKYMQ 365
YN V+ G R+ + +A + +M N P+ VSYR + GLC+ G A ++
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 366 LMISKGFSPHFSVSHALIKGF 386
++ KGF P FS + L +G
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGL 692
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILITLKSEHYPVTPSLF 133
A+EIFD R+S TY LI L +++ L+D +++ + P +
Sbjct: 489 AEEIFDEMEVHGVSRNS-VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK------PDKY 541
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
TY L+ + +A ++M C+P ++ L + A L +S
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-KAGRVEVASKLLRS 600
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKS 250
G+ +YN +++ + A LF +M E+ PD SYRI+ +GLC
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 251 Q-VNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ AVD L ++L KGFVP+ S L L
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY LI ++ + A K RS+ P N +++ L R A +
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE-AIN 631
Query: 188 LFKSA-HKHGVLPNTKSYNIMMRAFCFNGD-ISIAYTLFNKMFERGVMPDVESYRILMQG 245
LF+ ++ P+ SY I+ R C G I A ++ E+G +P+ S +L +G
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Query: 246 LCRKSQVNRAVDLLEDMLNKG-FVPDTLSYTTLLNSLCRKKKLREAYKLL 294
L S V L+ ++ K F + +S ++ L + +K ++A L
Sbjct: 692 LLTLSMEETLVKLVNMVMQKARFSEEEVS---MVKGLLKIRKFQDALATL 738
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 213/432 (49%), Gaps = 41/432 (9%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKY 110
S+ NS I +P ++ KL+ + + E+F + Q +RHS Y +LI KLG
Sbjct: 68 SLRNSFHKI-TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGE 126
Query: 111 FSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE----FNCKPLPK 166
F ID +LI +K E SLF +++ Y ++ P +T R MLE ++C+P K
Sbjct: 127 FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG---QTTRLMLEMRNVYSCEPTFK 183
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +LE+LV+ N + A ++F + P ++ ++M+AFC +I A +L
Sbjct: 184 SYNVVLEILVSG-NCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + G +P+ Y+ L+ L + ++VN A+ LLE+M G VPD ++ ++ LC+ +
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 287 LREAYKLLCRMKVKGCNPD-------------------------------IVHYNTVVLG 315
+ EA K++ RM ++G PD IV +NT++ G
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 316 FCREGRAIDACKVLEDM-PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
F GR DA VL DM S G +P++ +Y +L+ G +G+ +A + + M +KG P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ L+ GFC +GK+DEA VL E+ G P+ + ++ C + + E+
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 435 NEIVKVEIKGDT 446
E+ + K D
Sbjct: 483 REMPRKGCKPDV 494
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 3/301 (0%)
Query: 126 YPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
Y + P + TY LI Y + L AL+ M CKP +++ +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF-CKLGKID 441
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A+++ G+ PNT +N ++ AFC I A +F +M +G PDV ++ L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC ++ A+ LL DM+++G V +T++Y TL+N+ R+ +++EA KL+ M +G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
D + YN+++ G CR G A + E M +G P+ +S L+ GLC GM + A ++
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M+ +G +P ++LI G C G++++ + +L G P T+ ++ +C
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 424 G 424
G
Sbjct: 682 G 682
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 151/286 (52%), Gaps = 5/286 (1%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
KP N ++ VTH L +G++P+ +YN ++ + G + +A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+ + M +G P+V SY IL+ G C+ +++ A ++L +M G P+T+ + L+++
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C++ ++ EA ++ M KGC PD+ +N+++ G C A +L DM S G + N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH-ALIKGFCNVGKVDEACGVLE 400
V+Y TL+ +G A+K + M+ +G SP +++ +LIKG C G+VD+A + E
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
++L+ G AP + +++ +C +E+ E E+V ++G T
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV---LRGST 631
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LI + + + A++ FR M CKP N ++ L + ++ A L +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL-CEVDEIKHALWLLRDM 520
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
GV+ NT +YN ++ AF G+I A L N+M +G D +Y L++GLCR +V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A L E ML G P +S L+N LCR + EA + M ++G PDIV +N++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR GR D + + + G P+ V++ TL+ LC G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF---------------- 684
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
V +AC +L+E ++ G P+ TW +++ I E +++
Sbjct: 685 -------------------VYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A ++ G PN SY I++ FC G I AY + N+M G+ P+ + L+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C++ ++ AV++ +M KG PD ++ +L++ LC +++ A LL M +G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V YNT++ F R G +A K++ +M G + ++Y +L+ GLC G D A+
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G +P + LI G C G V+EA +E++ G P T+ ++ +C
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 425 EEME 428
+E
Sbjct: 648 GRIE 651
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 215/471 (45%), Gaps = 56/471 (11%)
Query: 11 KIVTTVTGAVTFPPKTPSLIFCYSSSSQESPSSPEQQQESS--ISNSKSP---------- 58
+ V+++ A+ PK+ S F S+ P SP+ E S +S+ ++P
Sbjct: 4 RTVSSLVRALYQTPKSQS--FRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVA 61
Query: 59 ----IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 114
+ S Q L ++ A F +A R P+F HS +Y IL+ LG +K F+L+
Sbjct: 62 YSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALL 121
Query: 115 DDILITLKSEHY-PVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE 173
D LI + +Y ++ +F + + Y+ +NLP A + F M+EF KP L+++L
Sbjct: 122 WDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLH 181
Query: 174 LLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMR------------------------ 209
L + ++ A + F A G++P+ K+Y+I++R
Sbjct: 182 SLCD-KKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCV 240
Query: 210 -----------AFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
A C +GD+ Y +F +M G+ PD S+ I + C V+ A +
Sbjct: 241 VDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKV 300
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ M VP+ ++ ++ +LC+ +K+ +AY LL M KG NPD YN+++ C
Sbjct: 301 LDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCD 360
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
A K+L M CLP+ +Y ++ L G FD A + + M + F P +
Sbjct: 361 HCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
Query: 379 SHALIKGFC-NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
+I G GK++EAC E ++ G P+ T M+ ++ +M+
Sbjct: 421 YTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
++K + I+ RA+ S A FN+M E G+ P V+ L+ LC K VN A +
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
G VP +Y+ L+ R + A K+ M + C D++ YN ++ C+
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G K+ ++M + G P+ S+ + CD G A K + M P+
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +IK C KVD+A +L+E+++ G P T+ I+ C E+ + ++L+ +
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ I+ + R + + A M+ G P LL+SLC KK + A + + K
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P Y+ +V G+ R A A KV ++M C+ +L++Y L+ LC G D
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
K Q M + G P I +C+ G V A VL+ + + P+ T+ I+
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+C E+++ +L+E+++ DT
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDT 348
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 197/380 (51%), Gaps = 3/380 (0%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
+N K+ S L+ + DP +IF+ AS+Q F H+N+TY +L+ L R K F
Sbjct: 47 TNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFL 106
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM-LEFNCKPLPKQLNRI 171
+D IL +K E SLF L++ ++ S+L D+ ++ F + + KP ++
Sbjct: 107 AVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTC 166
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L LL+ L + H G+ PNT +NI+++ C NGDI+ A+ + +M G
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 232 V-MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLRE 289
+ P+ +Y LM L S+ AV+L EDM++K G PD +++ ++N CR ++
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A K+L MK GCNP++ +Y+ ++ GFC+ G+ +A + +++ G + V Y TL+
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C G D A K + M + + +++G + G+ +EA +L++ G
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 410 HEDTWVMIVPQICAGEEMEK 429
++ ++ +I+ +C E+EK
Sbjct: 407 NKGSYRIILNALCCNGELEK 426
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 1/257 (0%)
Query: 183 RPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+ A +LF+ K G+ P+ ++N+M+ FC G++ A + + M + G P+V +Y
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
LM G C+ ++ A +++ G DT+ YTTL+N CR + EA KLL MK
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C D + YN ++ G EGR+ +A ++L+ S G N SYR ++ LC G + A
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K++ +M +G PH + + L+ C G + VL L+ G P +W +V I
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Query: 422 CAGEEMEKLGEVLNEIV 438
C ++ + E+L+ +V
Sbjct: 489 CKERKLVHVFELLDSLV 505
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLL-EDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
V P + + + L +VN + LL N G P+T + L+ C+ + A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 291 YKLLCRMKVKGCN-PDIVHYNTVVLGFCREGRAIDACKVLEDMPS-NGCLPNLVSYRTLV 348
+ ++ MK G + P+ + Y+T++ R+ +A ++ EDM S G P+ V++ ++
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 349 GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEA 408
G C G + AKK + M G +P+ AL+ GFC VGK+ EA +E+ K G
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLK 335
Query: 409 PHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ ++ C E ++ ++L E+ + DT
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
+T +YN+++R G A + ++ GV + SYRI++ LC ++ +AV
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L M +G P ++ L+ LC ++L G P + VV C+
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 319 EGRAIDACKVLEDMPS 334
E + + ++L+ + S
Sbjct: 491 ERKLVHVFELLDSLVS 506
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 35/353 (9%)
Query: 129 TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
T S+F ++K Y+ +L D+AL P N +L+ + + + A ++
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
FK + V PN +YNI++R FCF G+I +A TLF+KM +G +P+V +Y L+ G C+
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 308
+++ LL M KG P+ +SY ++N LCR+ +++E +L M +G + D V
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 309 YNTVVLGFCREGRAIDA--------------------------CKV---------LEDMP 333
YNT++ G+C+EG A CK L+ M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN +Y TLV G +G + A + ++ M GFSP +ALI G C GK++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+A VLE++ + G +P ++ ++ C ++++ V E+V+ IK DT
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 9/347 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKT 152
TY ILI R F+ D+ +TL K E P++ TY LI Y + D K
Sbjct: 207 TYNILI----RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
RSM +P N ++ L +F + ++ G + +YN +++ +C
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G+ A + +M G+ P V +Y L+ +C+ +NRA++ L+ M +G P+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YTTL++ +K + EAY++L M G +P +V YN ++ G C G+ DA VLEDM
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P++VSY T++ G C D A + + M+ KG P +LI+GFC +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
EAC + EE+L+ G P E T+ ++ C ++EK ++ NE+V+
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 2/334 (0%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
+Y ++I L R + +L + Y + + LIK Y + +AL M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
L P ++ + N R A + G+ PN ++Y ++ F G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNR-AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTT 276
++ AY + +M + G P V +Y L+ G C ++ A+ +LEDM KG PD +SY+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L+ CR + EA ++ M KG PD + Y++++ GFC + R +AC + E+M G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
P+ +Y L+ C +G + A + M+ KG P LI G + EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
+L +L P + T+ ++ C+ E + +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSV 608
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 57/360 (15%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILE-LLVTHRNYLRPAFDLFKS 191
+T L+ +++ + A + R M + P N ++ VT + + A + +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK--MEDAIAVLED 440
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ G+ P+ SY+ ++ FC + D+ A + +M E+G+ PD +Y L+QG C + +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN- 310
A DL E+ML G PD +YT L+N+ C + L +A +L M KG PD+V Y+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 311 -------------------------------------------------TVVLGFCREGR 321
+++ GFC +G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 322 AIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVS 379
+A +V E M P+ +Y ++ G C G D+ K Y + M+ GF H
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG--DIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
AL+K GKV+E V+ +L++ E + ++V M+ + +VL E+ K
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLED 261
KS +++ FC G ++ A +F M + PD +Y I++ G CR + +A L ++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 262 MLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC-REG 320
M+ GF+ T++ L+ +L ++ K+ E ++ + ++ C V++ REG
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV-LRSCELSEAEQAKVLVEINHREG 724
Query: 321 RAIDACKVLEDMPSNGCLPNLVS 343
VL +M +G LPN +S
Sbjct: 725 NMDVVLDVLAEMAKDGFLPNGIS 747
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 194/366 (53%), Gaps = 4/366 (1%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
+++++F A + +F+ +ST +I + F ++ +L ++ E+ + F +
Sbjct: 59 ISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVV 118
Query: 137 IKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA--FD-LFKSA 192
+ Y +++LPD+A+ F M+ EF CK K N +L +++ Y R +D + S
Sbjct: 119 FRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ PN S+N++++A C + A +F M ER +PD +Y LM GLC++ ++
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ AV LL++M ++G P + Y L++ LC+K L KL+ M +KGC P+ V YNT+
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C +G+ A +LE M S+ C+PN V+Y TL+ GL Q A + + M +G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ + LI G GK +EA + ++ + G P+ + ++V +C + + E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 433 VLNEIV 438
+LN ++
Sbjct: 419 ILNRMI 424
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 168/314 (53%), Gaps = 1/314 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F +IK + DRA++ FR M E C P +++ L + A L
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER-IDEAVLLLDEM 248
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G P+ YN+++ C GD++ L + MF +G +P+ +Y L+ GLC K ++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++AV LLE M++ +P+ ++Y TL+N L ++++ +A +LL M+ +G + + Y+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G +EG+A +A + M GC PN+V Y LV GLC +G + AK+ + MI+ G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P+ +L+KGF G +EA V +E+ K G + ++ + +++ +C +++
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 433 VLNEIVKVEIKGDT 446
V ++++ + IK DT
Sbjct: 489 VWSKMLTIGIKPDT 502
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 32/339 (9%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
++ TY LI L + + + +L +++ Y + +++ LI + + A+ +
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
R M E CKP + +++ L A ++ G LPN +Y+ +M+ F
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGL-CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
G A ++ +M + G + Y +L+ GLC +V A+ + ML G PDT++
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 274 YTTLLNSLCRKKKLREAYKL----LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
Y++++ LC + A KL LC+ + K PD+V YN ++ G C + A +L
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS-QPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 330 EDMPSNGCLPNLVSYRTLVGGL------CDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
M GC P++++ T + L CD+G + +++ ++ +
Sbjct: 564 NSMLDRGCDPDVITCNTFLNTLSEKSNSCDKG-----RSFLEELVVRLLKRQ-------- 610
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+V AC ++E +L AP TW MIV +IC
Sbjct: 611 -------RVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 21/113 (18%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS-------- 250
P+ +YNI++ C DIS A L N M +RG PDV + + L KS
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRS 597
Query: 251 -------------QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
+V+ A ++E ML K P T ++ ++ +C+ KK+ A
Sbjct: 598 FLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 192/402 (47%), Gaps = 3/402 (0%)
Query: 33 YSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFR 92
Y +S E P+ E + ++ P + L DP A +F + ++ FR
Sbjct: 21 YHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDL-KEIEDPEEALSLF-HQYQEMGFR 78
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H +Y LI KL +++ F +D IL ++ + SLF LI+ Y ++ D+A+
Sbjct: 79 HDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDV 138
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
F + F+C + LN ++ +LV + L A F A + PN+ S+NI+++ F
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDN-GELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
D A +F++M E V P V +Y L+ LCR + +A LLEDM+ K P+ +
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV 257
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
++ L+ LC K + EA KL+ M+ +GC P +V+Y ++ + GR +A +L +M
Sbjct: 258 TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEM 317
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++V Y LV LC + A + + M KG P+ + +I GFC +
Sbjct: 318 KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
D VL +L + P T+V +V + G ++ VL
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF + G + SY+ ++ + + + + R V + L+Q
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
+ V++A+D+ + + V S TL+N L +L +A K P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ V +N ++ GF + ACKV ++M P++V+Y +L+G LC AK +
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI K P+ L+KG C G+ +EA ++ ++ G P + +++ +
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
+++ +L E+ K IK D I
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVI 328
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
L+ + YP + +T LI+ + A+K M + C P N +L +
Sbjct: 231 LQRDCYPDVIT-YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN-VLVNGICKEG 288
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
L A G PN ++NI++R+ C G A L M +G P V ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
IL+ LCRK + RA+D+LE M G P++LSY LL+ C++KK+ A + L RM +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC PDIV YNT++ C++G+ DA ++L + S GC P L++Y T++ GL G A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + M +K P +L+ G GKVDEA E + G P+ T+ I+
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 421 ICAGEEMEK 429
+C + ++
Sbjct: 529 LCKSRQTDR 537
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 178/348 (51%), Gaps = 17/348 (4%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNC 161
+LG+ + + I +IL E P + TY +I Y ++ + AL M +
Sbjct: 149 RLGKTRKAAKILEIL-----EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SV 200
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
P N IL L L+ A ++ + P+ +Y I++ A C + + A
Sbjct: 201 SPDVVTYNTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
L ++M +RG PDV +Y +L+ G+C++ +++ A+ L DM + G P+ +++ +L S+
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---RAIDACKVLEDMPSNGCL 338
C + +A KLL M KG +P +V +N ++ CR+G RAID +LE MP +GC
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID---ILEKMPQHGCQ 376
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN +SY L+ G C + D A +Y++ M+S+G P + ++ C GKV++A +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
L +L G +P T+ ++ + + K ++L+E+ ++K DT
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 164/314 (52%), Gaps = 7/314 (2%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
TP + TY L+ + D A+K M C+P N IL + + ++ A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM-DAE 329
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G P+ ++NI++ C G + A + KM + G P+ SY L+ G
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
C++ +++RA++ LE M+++G PD ++Y T+L +LC+ K+ +A ++L ++ KGC+P +
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL 449
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL 366
+ YNTV+ G + G+ A K+L++M + P+ ++Y +LVGGL +G D A K+
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 367 MISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC---- 422
G P+ ++++ G C + D A L ++ G P+E ++ +++ +
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 423 AGEEMEKLGEVLNE 436
A E +E L E+ N+
Sbjct: 570 AKEALELLNELCNK 583
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 143/289 (49%), Gaps = 32/289 (11%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L F ++ HG +P+ ++R FC G A + + G +PDV +Y +
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 242 LMQGLCRKSQVN--------------------------------RAVDLLEDMLNKGFVP 269
++ G C+ ++N +A+++L+ ML + P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
D ++YT L+ + CR + A KLL M+ +GC PD+V YN +V G C+EGR +A K L
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
DMPS+GC PN++++ ++ +C G + A+K + M+ KGFSP + LI C
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
G + A +LE++ + G P+ ++ ++ C ++M++ E L +V
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 5/298 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
+ V+P + TY +++ +S +A++ ML+ +C P ++E T R+
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE--ATCRDS 253
Query: 182 -LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+ A L G P+ +YN+++ C G + A N M G P+V ++
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
I+++ +C + A LL DML KGF P +++ L+N LCRK L A +L +M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
GC P+ + YN ++ GFC+E + A + LE M S GC P++V+Y T++ LC G + A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ + + SKG SP + +I G GK +A +L+E+ P T+ +V
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 141 AESNLPDRALKTFR-SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLP 199
AE L D K F S++ FN IL + + L A D+ + +HG P
Sbjct: 328 AEKLLADMLRKGFSPSVVTFN----------ILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N+ SYN ++ FC + A +M RG PD+ +Y ++ LC+ +V AV++L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
+ +KG P ++Y T+++ L + K +A KLL M+ K PD + Y+++V G RE
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G+ +A K + G PN V++ +++ GLC D A ++ MI++G P+ +
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 380 HALIKGFCNVGKVDEACGVLEELLKAG 406
LI+G G EA +L EL G
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKG 584
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Query: 189 FKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCR 248
+ S + L + +S N +R G++ + M G +PD+ L++G CR
Sbjct: 91 YSSVNSSFALEDVESNN-HLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 249 KSQVNRAVDLLEDMLNKGFVPDTL--------------------------------SYTT 276
+ +A +LE + G VPD + +Y T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNT 209
Query: 277 LLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNG 336
+L SLC KL++A ++L RM + C PD++ Y ++ CR+ A K+L++M G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 337 CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEAC 396
C P++V+Y LV G+C +G D A K++ M S G P+ + +++ C+ G+ +A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 397 GVLEELLKAGEAPHEDTWVMIVPQIC 422
+L ++L+ G +P T+ +++ +C
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLC 355
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
Y+ N F + DVES L Q + R ++ LE+M+ G VPD + TTL+
Sbjct: 91 YSSVNSSF---ALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
CR K R+A K+L ++ G PD++ YN ++ G+C+ G +A VL+ M + P+
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PD 203
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
+V+Y T++ LCD G A + + M+ + P LI+ C V A +L+
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 401 ELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
E+ G P T+ ++V IC +++ + LN++
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 38/247 (15%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
+PS+ T+ LI L RA+ M + C+P N +L + R A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR-AI 399
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
+ + G P+ +YN M+ A C +G + A + N++ +G P + +Y ++ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL------------- 293
+ + +A+ LL++M K PDT++Y++L+ L R+ K+ EA K
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 294 ---------LCR-------------MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
LC+ M +GC P+ Y ++ G EG A +A ++L +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 332 MPSNGCL 338
+ + G +
Sbjct: 580 LCNKGLM 586
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 174/339 (51%), Gaps = 7/339 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
SP V KL+ S+ +P A +FD A+R P + HS Y ++ +L + + + I+
Sbjct: 9 SPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVEL 68
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLE-FNCKPLPKQLNRILELLVTHR 179
++S+ + +IK Y ++++PD+AL F+ M E F C+P + N +L V +
Sbjct: 69 IRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAK 128
Query: 180 NYLR--PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
+++ F F++A GV PN ++YN++++ C + A + M++ G PDV
Sbjct: 129 QWVKVESLFAYFETA---GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR- 296
SY ++ L + +++ A++L ++M +G PD Y L++ ++K + A +L R
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
++ P++ +N ++ G + GR D K+ E M N +L +Y +L+ GLCD G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
D A+ + + S + ++ GFC GK+ E+
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES 344
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 10/339 (2%)
Query: 72 QSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL-ITLKSEHYPVTP 130
+ D A E++D + + T+ I+I L + +DD L I + +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC---GRVDDCLKIWERMKQNEREK 288
Query: 131 SLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDL 188
L+TY LI ++ D+A F + E N +L ++ + +L
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF-CRCGKIKESLEL 347
Query: 189 FK-SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ HK+ V N SYNI+++ NG I A ++ M +G D +Y I + GLC
Sbjct: 348 WRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
VN+A+ +++++ + G D +Y ++++ LC+KK+L EA L+ M G +
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
N ++ G R+ R +A L +M NGC P +VSY L+ GLC G F A +++ M
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
+ G+ P L+ G C K+D A + + L++G
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 110/240 (45%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +L K KHGV N+ N ++ + + A +M + G P V SY I
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC+ + A +++ML G+ PD +Y+ LL LCR +K+ A +L + G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D++ +N ++ G C G+ DA V+ +M C NLV+Y TL+ G G + A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
M G P + ++KG C V A ++ G P TW ++V +
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%)
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
K+G P SYNI++ C G A +M E G PD+++Y IL+ GLCR +++
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
A++L L G D + + L++ LC KL +A ++ M+ + C ++V YNT++
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GF + G + A + M G P+++SY T++ GLC A ++ + G
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 374 PHFSVSHALIKGFCN 388
P + L++ N
Sbjct: 672 PTVYTWNILVRAVVN 686
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 172/404 (42%), Gaps = 46/404 (11%)
Query: 82 FDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKI 139
F+ A PN + TY +LI + K F L + E + P +F+Y +I
Sbjct: 140 FETAGVAPNLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFK--PDVFSYSTVIND 193
Query: 140 YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF-KSAHKHGVL 198
A++ D AL+ F M E P N +++ + +++ + A +L+ + V
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH-KTAMELWDRLLEDSSVY 252
Query: 199 PNTKSYNIMM-----------------------------------RAFCFNGDISIAYTL 223
PN K++NIM+ C G++ A ++
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
FN++ ER DV +Y ++ G CR ++ +++L M +K V + +SY L+ L
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLE 371
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
K+ EA + M KG D Y + G C G A V++++ S+G ++ +
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y +++ LC + + A ++ M G + V +ALI G ++ EA L E+
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
K G P ++ +++ +C + + + E+++ K D +
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y+ A + + G + +Y ++ C + A L +M + GV +
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ GL R S++ A L +M G P +SY L+ LC+ K EA + M
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 301 GCNPDIVHYNTVVLGFCREGRAID-ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G PD+ Y+ ++ G CR+ R ID A ++ +G +++ + L+ GLC G D
Sbjct: 529 GWKPDLKTYSILLCGLCRD-RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A M M + + + + L++GF VG + A + + K G P ++ I+
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 420 QIC 422
+C
Sbjct: 648 GLC 650
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 164 LPKQLN--RILELLVTHRNYLRPAFDLFKSAHKH-GVLPNTKSYNIMMRAFCFNGDISIA 220
PK L+ +L+LL + +N R AF LF SA +H G + Y+ ++R
Sbjct: 4 FPKSLSPKHVLKLLKSEKN-PRAAFALFDSATRHPGYAHSAVVYHHILR----------- 51
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
++ E ++ V L++ K + A+ +++ K +PD +
Sbjct: 52 -----RLSETRMVNHVSRIVELIRSQECKCDEDVALSVIK-TYGKNSMPD--------QA 97
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
L K++RE + GC P I YNT++ F + + + + G PN
Sbjct: 98 LDVFKRMREIF---------GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPN 148
Query: 341 LVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLE 400
L +Y L+ C + F+ A+ ++ M +GF P +I GK+D+A + +
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 401 ELLKAGEAP 409
E+ + G AP
Sbjct: 209 EMSERGVAP 217
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + + N +YN +M F GD + A ++ M++ G+ PD+ SY
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+M+GLC V+ A++ +D N G P ++ L+ ++ +
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEF 159
IL G L D + + EH T +L TY L++ + + +RA + M +
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM 633
Query: 160 NCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+P N I++ L R + A + F A HG+ P ++NI++RA
Sbjct: 634 GLQPDIISYNTIMKGLCMCRG-VSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G+ + Y +L L + + +++ ++ + C D +V+ + + A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 326 CKVLEDMPS-NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
V + M GC P + SY TL+ + + + + G +P+ + LIK
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
C + ++A G L+ + K G P ++ ++ + +++ E+ +E+
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 35/406 (8%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSE 124
V K + +S LA F + F+H+ T+ ++I KL + +L +K +
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 125 HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ + LF +I +Y + L +RA++ F + EF C P K N +L+ L+ N ++
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE-NRIQM 164
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD--------- 235
+ +++ + G PN +YN++++A C N + A L +M +G PD
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 236 ---------------------VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
V Y L+ GLC++ A +L+ +M+ KG P+ +SY
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 275 TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPS 334
+TL+N LC ++ A+ L +M +GC+P+I +++V G G DA + M
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 335 N-GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVD 393
G PN+V+Y TLV G C G A M G SP+ +LI GF G +D
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAG---EEMEKLGEVLNE 436
A + ++L +G P+ + +V +C +E E L E++++
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 5/312 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ +Y LI + S + A ML+ C P L+ +++ R A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL-RGTTFDA 335
Query: 186 FDLFKSAHK-HGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
DL+ + G+ PN +YN +++ FC +G+I A ++F+ M E G P++ +Y L+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G ++ ++ AV + ML G P+ + YT ++ +LCR K +EA L+ M + C P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMP-SNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
+ +N + G C GR A KV M + C PN+V+Y L+ GL + A
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ + +G S + L+ G CN G A ++ +++ G++P E T MI+ C
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 424 GEEMEKLGEVLN 435
+ E+ ++L+
Sbjct: 576 QGKAERAAQMLD 587
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 14/305 (4%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN N+ L G + +++ + + E +P++ TY LI +A+
Sbjct: 349 QPNVVAYNT------LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A+ + ML C P ++E L H + + A L + K P+ ++N
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF-KEAESLIEIMSKENCAPSVPTFN 461
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERG-VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
++ C G + A +F +M ++ P++ +Y L+ GL + +++ A L ++
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
+G + +Y TLL+ C A +L+ +M V G +PD + N ++L +C++G+A
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 325 ACKVLEDMPSNG---CLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHA 381
A ++L D+ S G P+++SY ++ GLC + ++ MIS G P +
Sbjct: 582 AAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 382 LIKGF 386
LI F
Sbjct: 641 LINCF 645
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 40/309 (12%)
Query: 149 ALKTFRSMLE-FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL + M+ F +P N +++ +H N ++ A +F + G PN ++Y +
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK-AVSVFSHMEEIGCSPNIRTYGSL 393
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM----- 262
+ F G + A ++NKM G P+V Y +++ LCR S+ A L+E M
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 263 ---------LNKGFV----------------------PDTLSYTTLLNSLCRKKKLREAY 291
KG P+ ++Y LL+ L + ++ EAY
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L + ++G YNT++ G C G A +++ M +G P+ ++ ++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 352 CDQGMFDVAKKYMQLMIS--KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
C QG + A + + L+ + + P +I G C ++ +LE ++ AG P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 410 HEDTWVMIV 418
TW +++
Sbjct: 634 SIATWSVLI 642
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 121/256 (47%), Gaps = 6/256 (2%)
Query: 185 AFDLFKSAHKHGVLPNTK-SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A FKS + +T ++ +M+R +G + L +M +G + + ++
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ RAV++ + G P Y +L++L + +++ Y + MK G
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P++ YN ++ C+ + A K+L +M + GC P+ VSY T++ +C+ G+ ++
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE- 237
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+++ F P SV +ALI G C A ++ E+++ G +P+ ++ ++ +C
Sbjct: 238 ----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 424 GEEMEKLGEVLNEIVK 439
++E L +++K
Sbjct: 294 SGQIELAFSFLTQMLK 309
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 97 TYLILI----LKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY ILI L+ G + L+D++L + P +FTY +I+ + + DRA
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEML------SRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ R++ C+P N +L L+ + L PN +Y+I++
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKW-EEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C +G I A L M E+G+ PD SY L+ CR+ +++ A++ LE M++ G +PD
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y T+L +LC+ K +A ++ ++ GC+P+ YNT+ G I A ++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M SNG P+ ++Y +++ LC +GM D A + + M S F P + ++ GFC
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLGEVLNEIVKVE 441
++++A VLE ++ G P+E T+ +++ I AG E + E+ N++V+++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM-ELANDLVRID 573
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 4/308 (1%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P +F Y LI + + N D A + M + P N ++ L + R L A
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-RGKLDLALK 214
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ P +Y I++ A G + A L ++M RG+ PD+ +Y +++G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ V+RA +++ ++ KG PD +SY LL +L + K E KL+ +M + C+P++V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+ ++ CR+G+ +A +L+ M G P+ SY L+ C +G DVA ++++ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEE 426
IS G P + ++ C GK D+A + +L + G +P+ ++ M +G++
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 427 MEKLGEVL 434
+ L +L
Sbjct: 455 IRALHMIL 462
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 124/240 (51%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
P+ +YN ++ FC I A + ++M + PD +Y I++ LC + +++ A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L +L+ P ++YT L+ + + + EA KL+ M +G PD+ YNT++ G C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
EG A +++ ++ GC P+++SY L+ L +QG ++ +K M M S+ P+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
LI C GK++EA +L+ + + G P ++ ++ C ++ E L ++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 122/221 (55%), Gaps = 3/221 (1%)
Query: 226 KMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKK 285
++ E+ PDV +Y L+ G C+ ++++ A +L+ M +K F PDT++Y ++ SLC +
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 286 KLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYR 345
KL A K+L ++ C P ++ Y ++ EG +A K++++M S G P++ +Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
T++ G+C +GM D A + ++ + KG P + L++ N GK +E ++ ++
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 406 GEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
P+ T+ +++ +C ++E E +N + ++ KG T
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIE---EAMNLLKLMKEKGLT 365
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 165/346 (47%), Gaps = 12/346 (3%)
Query: 117 ILITLKSEHYPVTPSL--FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
I + K E Y ++ L FT LI + + AL M++ +P +L
Sbjct: 91 IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
N + AF L K G PN YN ++ C NG+++IA L N+M ++G+
Sbjct: 151 FCL-VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y L+ GLC + + A +L DM+ + PD +++T L++ ++ L EA +L
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M +P+ V YN+++ G C GR DA K + M S GC PN+V+Y TL+ G C
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
M D K Q M +GF+ + LI G+C VGK+ A + ++ P T
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 415 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLI 460
+++ +C GE+ + +VK + D R E IG+ Y I
Sbjct: 390 CILLHGLCVN------GEIESALVKFD---DMRESEKYIGIVAYNI 426
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A + R M++ + P ++++ V N L A +L+K + V PN +YN ++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGN-LDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
C +G + A F+ M +G P+V +Y L+ G C+ V+ + L + M +GF
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
D +Y TL++ C+ KLR A + C M + PDI+ + ++ G C G A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+DM + +V+Y ++ GLC + A + + +G P +I G C
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 389 VGKVDEACGVLEELLKAG 406
G EA ++ + + G
Sbjct: 469 NGPRREADELIRRMKEEG 486
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 40/241 (16%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH-RNY-LRPAFDLFK 190
FT LI ++ + D A + ++ M++ + P N I+ L H R Y + FDL
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 191 SAHKHGVLPNTKSYNIMMRAFC-------------------FNGDI-------------- 217
S G PN +YN ++ FC FN DI
Sbjct: 309 SK---GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 218 --SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+A +F M R V PD+ ++ IL+ GLC ++ A+ +DM ++Y
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
+++ LC+ K+ +A++L CR+ V+G PD Y ++LG C+ G +A +++ M
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 336 G 336
G
Sbjct: 486 G 486
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A+ LF +M +P + + L+ + + + M G D S+T L++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR +L A +L +M G P IV + +++ GFC R DA ++ M +G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
N+V Y TL+ GLC G ++A + + M KG + L+ G C G+ +A +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+++K P T+ ++ +++ E+ E+++ +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L G + A L +M++ +P + +T LL + ++ +M++ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+ D+ + ++ FCR R A VL M G P++V++ +L+ G C A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ LM+ G+ P+ V + LI G C G+++ A +L E+ K G T+ ++ +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C +L +++K I D
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDV 246
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 35/365 (9%)
Query: 92 RHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALK 151
R + Y LI L A+ D+ + +K + T +T LIK S AL
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 152 TFRSMLEFNCKP-----------LPKQ---------LNRILEL-----LVTH-------- 178
+ M E KP L Q L ++LE ++T+
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 179 -RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
R + A D+ + + PNT++YN +++ +C ++ A + NKM ER V+PDV
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVV 463
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y L+ G CR + A LL M ++G VPD +YT++++SLC+ K++ EA L +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+ KG NP++V Y ++ G+C+ G+ +A +LE M S CLPN +++ L+ GLC G
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A + M+ G P S LI G D A +++L +G P T+
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 418 VPQIC 422
+ C
Sbjct: 644 IQTYC 648
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 159/311 (51%), Gaps = 2/311 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T+LI + D A+ F M + C P + +++ L A +L K
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK-SEALNLVKEM 349
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PN +Y +++ + C A L +M E+G+MP+V +Y L+ G C++ +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
AVD++E M ++ P+T +Y L+ C K + +A +L +M + PD+V YN++
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G CR G A ++L M G +P+ +Y +++ LC + A + KG
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+P+ + ALI G+C GKVDEA +LE++L P+ T+ ++ +CA ++++
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 433 VLNEIVKVEIK 443
+ ++VK+ ++
Sbjct: 589 LEEKMVKIGLQ 599
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 189/405 (46%), Gaps = 13/405 (3%)
Query: 42 SSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL 101
S P + S+ + S I SP V L + DP A + S+ P ++HS +Y L
Sbjct: 71 SKPNWHKSPSLKSMVSAI-SPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASL 129
Query: 102 ILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
+ L Y ++ I + + V +L Y++ + + N +R E
Sbjct: 130 LTLLINNGYVGVVFKIRLLMIKSCDSVGDAL--YVLDLCRKMNKDER--------FELKY 179
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAY 221
K + N +L L + ++ + V PN +YN M+ +C G++ A
Sbjct: 180 KLIIGCYNTLLNSLARF-GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 222 TLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
+K+ E G+ PD +Y L+ G C++ ++ A + +M KG + ++YT L++ L
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 282 CRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNL 341
C +++ EA L +MK C P + Y ++ C R +A ++++M G PN+
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 342 VSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEE 401
+Y L+ LC Q F+ A++ + M+ KG P+ +ALI G+C G +++A V+E
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 402 LLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +P+ T+ ++ C + +G VLN++++ ++ D
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDV 462
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 159/333 (47%), Gaps = 10/333 (3%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
+PN TY +LI L F ++L + + + P++ TY LI Y + +
Sbjct: 355 KPNIH----TYTVLIDSLCSQCKFEKARELLGQMLEK--GLMPNVITYNALINGYCKRGM 408
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
+ A+ M P + N +++ ++ + A + + VLP+ +YN
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYC--KSNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C +G+ AY L + M +RG++PD +Y ++ LC+ +V A DL + + K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G P+ + YT L++ C+ K+ EA+ +L +M K C P+ + +N ++ G C +G+ +A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+ E M G P + + L+ L G FD A Q M+S G P I+
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+C G++ +A ++ ++ + G +P T+ ++
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 19/334 (5%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E ++P+ TY LIK Y +SN+ +A+ MLE P N +++ N+
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
A+ L + G++P+ +Y M+ + C + + A LF+ + ++GV P+V Y
Sbjct: 479 -DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V+ A +LE ML+K +P++L++ L++ LC KL+EA L +M G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P + ++ ++G A + M S+G P+ +Y T + C +G A+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV--- 418
M M G SP +LIKG+ ++G+ + A VL+ + G P + T++ ++
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 419 ------------PQICAGEEMEKLGEVLNEIVKV 440
P++CA M + V+ + K+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 26/296 (8%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
H+ +T++ + GR L+D + K V+P LFTY LIK Y + + A
Sbjct: 638 HTYTTFIQTYCREGR-----LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ M + C+P +++ L+ K + G P + + MM
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLE-----------MKYGKQKGSEPELCAMSNMM-- 739
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML-NKGFVP 269
+ L KM E V P+ +SY L+ G+C + A + + M N+G P
Sbjct: 740 -----EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVL 329
L + LL+ C+ KK EA K++ M G P + ++ G ++G V
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 330 EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+++ G + ++++ ++ G+ QG+ + + +M G LI+G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 23/332 (6%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLP 165
G+ K +L+++ ++ + + T S T LI + D A F+ ML KP
Sbjct: 581 GKLKEATLLEEKMVKIGLQP---TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 166 KQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFN 225
++ L A D+ ++GV P+ +Y+ +++ + G + A+ +
Sbjct: 638 HTYTTFIQTYC-REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 226 KMFERGVMPDVESYRILMQGL---------------CRKS---QVNRAVDLLEDMLNKGF 267
+M + G P ++ L++ L C S + + V+LLE M+
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P+ SY L+ +C LR A K+ M + +G +P + +N ++ C+ + +A
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
KV++DM G LP L S + L+ GL +G + Q ++ G+ +I G
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
G V+ + + K G T+ +++
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 189/401 (47%), Gaps = 19/401 (4%)
Query: 68 LIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF----SLIDDILIT--- 120
L+ Q D LL+ E F++A + HS T+ I++ L + + F S++ D+L+
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 121 -LKSEHYPV----------TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
L ++ + TP +F L K +A A TF M ++ P + N
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCN 207
Query: 170 RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE 229
+ L+ + + A ++ + + PN + N++M +C +G + L M
Sbjct: 208 AYMSSLLG-QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 230 RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLRE 289
G SY L+ G C K ++ A+ L M G P+ +++ TL++ CR KL+E
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 290 AYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
A K+ MK P+ V YNT++ G+ ++G A + EDM NG ++++Y L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
GLC Q A ++++ + + P+ S ALI G C D + + ++++G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
+E T+ M+V C E+ + +VL E+V+ I D+R V
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
++L ++ + T + LI + E L ALK M + +P N ++
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
L+ A +F V PNT +YN ++ + GD +A+ + M G+ D
Sbjct: 319 CRAMK-LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
+ +Y L+ GLC++++ +A ++++ + VP++ +++ L+ C +K ++L
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M GC+P+ +N +V FCR A +VL +M + + + GL QG
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 356 MFDVAKKYMQLMISKGF 372
+ KK +Q M K F
Sbjct: 498 KDQLVKKLLQEMEGKKF 514
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
F+L+KS + G PN +++N+++ AFC N D A + +M R + D + +
Sbjct: 432 GFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
GL + + LL++M K F+ ++ +
Sbjct: 492 GLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 166/314 (52%), Gaps = 3/314 (0%)
Query: 117 ILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 174
+L+ K Y P+ TY ++ + +S A++ R M E N K + + I++
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L H + L AF+LF G+ N +YNI++ FC G L M +R + P
Sbjct: 273 LCKHGS-LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
+V ++ +L+ ++ ++ A +L ++M+++G PDT++YT+L++ C++ L +A +++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
M KGC+P+I +N ++ G+C+ R D ++ M G + + V+Y TL+ G C+
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G +VAK+ Q M+S+ P+ L+ G C+ G+ ++A + E++ K+ +
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 415 VMIVPQICAGEEME 428
+I+ +C +++
Sbjct: 512 NIIIHGMCNASKVD 525
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 130/254 (51%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF K G PNT +++ ++ C G +S A L ++M E G PD+ + L+
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC + A+ L++ M+ G P+ ++Y +LN +C+ + A +LL +M+ +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y+ ++ G C+ G +A + +M G N+++Y L+GG C+ G +D K +
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ MI + +P+ LI F GK+ EA + +E++ G AP T+ ++ C
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 425 EEMEKLGEVLNEIV 438
++K ++++ +V
Sbjct: 382 NHLDKANQMVDLMV 395
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 5/303 (1%)
Query: 146 PDRALKTFRSMLEFNCKPLPKQLN--RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
D A+ FR M+ + +PLP ++ R+ + + Y L K G+ N +
Sbjct: 69 ADDAIDLFRDMI--HSRPLPTVIDFSRLFSAIAKTKQY-DLVLALCKQMELKGIAHNLYT 125
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+IM+ FC + +A++ K+ + G P+ ++ L+ GLC + +V+ A++L++ M+
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G PD ++ TL+N LC K EA L+ +M GC P+ V Y V+ C+ G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A ++L M + V Y ++ GLC G D A M KG + + + LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFCN G+ D+ +L +++K P+ T+ +++ ++ + E+ E++ I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 444 GDT 446
DT
Sbjct: 366 PDT 368
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 5/311 (1%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G K+ SL + + + E +T ++ TY LI + + D K R M++ P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++ V LR A +L K G+ P+T +Y ++ FC + A +
Sbjct: 332 NVVTFSVLIDSFVKE-GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
+ M +G P++ ++ IL+ G C+ ++++ ++L M +G V DT++Y TL+ C
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
KL A +L M + P+IV Y ++ G C G + A ++ E + + ++
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C+ D A + KG P + +I G C G + EA + ++
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 404 KAGEAPHEDTW 414
+ G AP D W
Sbjct: 571 EDGHAP--DGW 579
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%)
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
N+L A + G PN +++NI++ +C I LF KM RGV+ D +Y
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
L+QG C ++N A +L ++M+++ P+ ++Y LL+ LC + +A ++ +++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
DI YN ++ G C + DA + +P G P + +Y ++GGLC +G
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A+ + M G +P + LI+ G ++ ++EEL + G + T M++
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 420 QICAG 424
+ G
Sbjct: 622 MLSDG 626
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 3/244 (1%)
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SY +R+ + A LF M +P V + L + + Q + + L + M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
KG + + + ++N CR +KL A+ + ++ G P+ + ++T++ G C EGR
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
+A ++++ M G P+L++ TLV GLC G A + M+ G P+ +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ C G+ A +L ++ + + +I+ +C ++ + NE+ E+
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EM 291
Query: 443 KGDT 446
KG T
Sbjct: 292 KGIT 295
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 177/349 (50%), Gaps = 17/349 (4%)
Query: 80 EIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKI 139
E D+ +P N+ +L+ + YF + + ++ +TP ++++ I++
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLV----DSGYFDQAHKVYMRMRDR--GITPDVYSFTIRM 153
Query: 140 --YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT----HRNYLRPAFDLFKSAH 193
+ +++ P AL+ +M C ++N + V N+ ++LF
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGC-----EMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 194 KHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
GV ++N ++R C GD+ L +K+ +RGV+P++ +Y + +QGLC++ +++
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 254 RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
AV ++ ++ +G PD ++Y L+ LC+ K +EA L +M +G PD YNT++
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
G+C+ G A +++ D NG +P+ +YR+L+ GLC +G + A + KG
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
P+ + + LIKG N G + EA + E+ + G P T+ ++V +C
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 179/383 (46%), Gaps = 2/383 (0%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL 121
P V +I Q DP+ A E+F+ ++ F+H+ STY +I KLG F ++++L+ +
Sbjct: 7 PKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 66
Query: 122 KSE-HYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+ + ++ +K Y A+ F M ++C+P N I+ +LV
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV-DSG 125
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
Y A ++ G+ P+ S+ I M++FC A L N M +G +V +Y
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ G ++ +L ML G ++ LL LC+K ++E KLL ++ +
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P++ YN + G C+ G A +++ + G P++++Y L+ GLC F A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+ Y+ M+++G P + LI G+C G V A ++ + + G P + T+ ++
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 421 ICAGEEMEKLGEVLNEIVKVEIK 443
+C E + + NE + IK
Sbjct: 366 LCHEGETNRALALFNEALGKGIK 388
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 1/319 (0%)
Query: 117 ILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+L + S+ + + ++ + E N + F ML N++L +L
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
+ ++ L K GVLPN +YN+ ++ C G++ A + + E+G PDV
Sbjct: 228 KKGD-VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
+Y L+ GLC+ S+ A L M+N+G PD+ +Y TL+ C+ ++ A +++
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
G PD Y +++ G C EG A + + G PN++ Y TL+ GL +QGM
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + M KG P + L+ G C +G V +A G+++ ++ G P T+ +
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 417 IVPQICAGEEMEKLGEVLN 435
++ +ME E+L+
Sbjct: 467 LIHGYSTQLKMENALEILD 485
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+LFTY I+ + D A++ ++E KP N ++ L + +
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L K ++ G+ P++ +YN ++ +C G + +A + G +PD +YR L+ G
Sbjct: 307 VYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC + + NRA+ L + L KG P+ + Y TL+ L + + EA +L M KG P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N +V G C+ G DA +++ M S G P++ ++ L+ G Q + A + +
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
+M+ G P ++L+ G C K ++ + +++ G AP+ T+ +++ +C
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 426 EMEKLGEVLNEI 437
++++ +L E+
Sbjct: 546 KLDEALGLLEEM 557
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 129 TPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAF 186
P FTY LI +RAL F L KP N +++ L +++ + A
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL-SNQGMILEAA 411
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
L + G++P +++NI++ C G +S A L M +G PD+ ++ IL+ G
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 306
+ ++ A+++L+ ML+ G PD +Y +LLN LC+ K + + M KGC P++
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 307 VHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD-------- 358
+N ++ CR + +A +LE+M + P+ V++ TL+ G C G D
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 359 ----------------------------VAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+A+K Q M+ + P ++ GFC G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
V+ L E+++ G P T ++ +C + + + +++ +V+
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 131/334 (39%), Gaps = 39/334 (11%)
Query: 127 PVTPSLFTYLIKIYAESNLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPA 185
P+ P T +IK + P +AL+ F SM E K ++E L + +
Sbjct: 4 PLLPKHVTAVIKCQKD---PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L G Y M+ + G + A +F +M P V SY +M
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L ++A + M ++G PD S+T + S C+ + A +LL M +GC +
Sbjct: 121 LVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN 180
Query: 306 IVHYNTVVLGF-----------------------------------CREGRAIDACKVLE 330
+V Y TVV GF C++G + K+L+
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G LPNL +Y + GLC +G D A + + +I +G P + LI G C
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
K EA L +++ G P T+ ++ C G
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 48/267 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P ++TY L+ +++ + ++T+++M+E C P N +LE L +R L A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK-LDEA 550
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFE---------------- 229
L + V P+ ++ ++ FC NGD+ AYTLF KM E
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 230 --------------------RGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVP 269
R + PD +YR+++ G C+ VN L +M+ GF+P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 270 DTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR-EGRAIDACK- 327
+ ++N LC + ++ EA ++ RM KG P+ V NT+ C + + + A K
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI----CDVDKKEVAAPKL 724
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
VLED+ C+ +Y L GL D+
Sbjct: 725 VLEDLLKKSCI-TYYAYELLFDGLRDK 750
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 197/390 (50%), Gaps = 14/390 (3%)
Query: 62 PCRVQKLIASQSDPLLAKEIFDYASR-QPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
P R+ +I Q + LA +IF YA + P F H+ TY ++ KL RA+ F ++ ++
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMAD 108
Query: 121 LKSEHYPVT--PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
L++ + P+ +LF L++ Y + + +++ F + +F K + LN +L +L+ +
Sbjct: 109 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 168
Query: 179 RNYLRPAFDLFKSAHKH-----GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVM 233
+ FDL + K+ G+ PN + N++++A C DI AY + +++ G++
Sbjct: 169 QR-----FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLV 223
Query: 234 PDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKL 293
P++ +Y ++ G + + A +LE+ML++G+ PD +YT L++ C+ + EA +
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 294 LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ M+ P+ V Y ++ C+E ++ +A + ++M +P+ ++ LC+
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
D A + M+ P ++ LI C G+V EA + +E K G P T
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLT 402
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+ ++ +C E+ + G + +++ + + K
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCK 432
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + K+ + PN +Y +M+RA C A +F++M ER MPD ++
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
LC +V+ A L ML +PD +TL++ LC++ ++ EA KL + KG P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIP 398
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++ YNT++ G C +G +A ++ +DM C PN +Y L+ GL G + +
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+ G P+ + L +G +GK ++A ++ + G+ E +W + + +
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKE-SWELFLKKFAG- 516
Query: 425 EEMEK----LGEVLNEI 437
E++K L E+L+EI
Sbjct: 517 -ELDKGVLPLKELLHEI 532
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
S TLLN L + ++ + + K G P+I N +V C++ A KVL++
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGK 391
+PS G +PNLV+Y T++GG +G + AK+ ++ M+ +G+ P + L+ G+C +G+
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 392 VDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
EA V++++ K P+E T+ +++ +C ++ + + +E+++ D+ +
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 34/215 (15%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
TY ++I L + K ++ + + SL +I E + D A +R M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 157 LEFNCKPLPKQLNRILELL-----VTHRNYLRPAFD------------------------ 187
L+ NC P L+ ++ L VT L F+
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 188 ----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
L+ ++ PN +YN+++ NG++ + +M E G P+ ++ IL
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+GL + + A+ ++ + G V D S+ L
Sbjct: 478 EGLQKLGKEEDAMKIVSMAVMNGKV-DKESWELFL 511
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 149/300 (49%), Gaps = 3/300 (1%)
Query: 144 NLPDRALKTFRSML-EFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
NL D ALK F M E C P + ++ L L AF L + G P+T+
Sbjct: 245 NLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGL-CEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
+Y ++++A C G I A+ LF++M RG P+V +Y +L+ GLCR ++ A + M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ P ++Y L+N C+ ++ A++LL M+ + C P++ +N ++ G CR G+
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A +L+ M NG P++VSY L+ GLC +G + A K + M P A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
I FC GK D A L +L+ G + E T ++ +C + +L +VK+ I
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 192/446 (43%), Gaps = 81/446 (18%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILI---LKLGR-AKYFSLIDDILITLKSEHYPVTPSLF 133
A ++FD S++ ++ +Y ILI ++GR + F L D + PS
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM------GEKGCQPSTR 302
Query: 134 TY--LIKIYAESNLPDRALKTFRSMLEFNCKP-------LPKQL---------------- 168
TY LIK + L D+A F M+ CKP L L
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 169 --NRILELLVTHRNYLR---------PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
+RI ++T+ + PAF+L K PN +++N +M C G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A L +M + G+ PD+ SY +L+ GLCR+ +N A LL M PD L++T +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE------- 330
+N+ C++ K A L M KG + D V T++ G C+ G+ DA +LE
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 331 -----------DMPSNGC-----------------LPNLVSYRTLVGGLCDQGMFDVAKK 362
DM S GC +P++V+Y TLV GL G + +
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
++LM G P+ +I G C G+V+EA +L + +G +P+ T+ ++V
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRI 448
++++ E + +V+ + + RI
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRI 688
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 179 RNYLRPAFDLFKSA-HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDV 236
+N A ++F S K G + ++ ++ FC ++ A +F+ M E P+
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
SY IL+ GLC ++ A L + M KG P T +YT L+ +LC + + +A+ L
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGM 356
M +GC P++ Y ++ G CR+G+ +A V M + P++++Y L+ G C G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 357 FDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVM 416
A + + +M + P+ + L++G C VGK +A +L+ +L G +P ++ +
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 417 IVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ +C M ++L+ + +I+ D
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F L++ P +A+ + ML+ P N +++ L ++ A+ L S
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL-CREGHMNTAYKLLSSM 467
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ + P+ ++ ++ AFC G +A M +G+ D + L+ G+C+ +
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 253 NRAVDLLE------------------DMLNKG-----------------FVPDTLSYTTL 277
A+ +LE DML+KG VP ++YTTL
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
++ L R + ++++L MK+ GC P++ Y ++ G C+ GR +A K+L M +G
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
PN V+Y +V G + G D A + ++ M+ +G+ + + +L++GF
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
+AY + +M G + + YR ++ LC+ A + +L GFV D+ T+LL
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 279 NSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
CR LR+A K+ M K C P+ V Y+ ++ G C GR +A + + M GC
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
P+ +Y L+ LCD+G+ D A MI +G P+ LI G C GK++EA G
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
V +++K P T+ ++ C + E+L + K K + R
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 143/308 (46%), Gaps = 20/308 (6%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL ++++ P LN IL++L + ++ + +K G++P+ +Y ++
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDML-SKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+GDI+ ++ + M G +P+V Y I++ GLC+ +V A LL M + G
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK- 327
P+ ++YT ++ KL A + + M +G + Y++++ GF + ID +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 328 -VLEDMP----SNGCLPNLVSYRTLVGG------------LCDQGMFDVAKKYMQLMISK 370
+ D+ C+ L+S +GG LC +G D + +Q ++ +
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G ++ +++ +C+ K + ++ +LK+G P ++ +++ + + E+
Sbjct: 769 GVFLEKAMD-IIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827
Query: 431 GEVLNEIV 438
E++ E++
Sbjct: 828 RELVMELL 835
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGL 246
DL ++ + GV K+ +I+M ++C + L + + G +P +S+ +++QGL
Sbjct: 760 DLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGL 818
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
++ RA +L+ ++L V + T + L
Sbjct: 819 KKEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 164/320 (51%), Gaps = 3/320 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P+ TY ++ + +S A++ R M E N K + + I++ L L AF+
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD-GSLDNAFN 284
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G + +YN ++ FC G L M +R + P+V ++ +L+
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A LL++M+ +G P+T++Y +L++ C++ +L EA +++ M KGC+PDI+
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N ++ G+C+ R D ++ +M G + N V+Y TLV G C G +VAKK Q M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S+ P L+ G C+ G++++A + ++ K+ +++I+ +C ++
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 428 EKLGEVLNEIVKVEIKGDTR 447
+ ++ + +K D R
Sbjct: 525 DDAWDLFCSLPLKGVKLDAR 544
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 144/264 (54%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +L + + + + Y+I++ C +G + A+ LFN+M +G D+ +Y L+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C + + LL DM+ + P+ ++++ L++S ++ KLREA +LL M +G P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ + YN+++ GFC+E R +A ++++ M S GC P+++++ L+ G C D +
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M +G + + L++GFC GK++ A + +E++ P ++ +++ +C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 425 EEMEKLGEVLNEIVKVEIKGDTRI 448
E+EK E+ +I K +++ D I
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGI 510
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 136/257 (52%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L AF K G P+T +N ++ C +S A L ++M E G P + +
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ GLC +V+ AV L++ M+ GF P+ ++Y +LN +C+ + A +LL +M+ +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
D V Y+ ++ G C++G +A + +M G ++++Y TL+GG C+ G +D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
K ++ MI + SP+ LI F GK+ EA +L+E+++ G AP+ T+ ++
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 422 CAGEEMEKLGEVLNEIV 438
C +E+ ++++ ++
Sbjct: 379 CKENRLEEAIQMVDLMI 395
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 5/303 (1%)
Query: 146 PDRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKS 203
D A+ FR M++ +PLP NR+ + + Y L K G+ + +
Sbjct: 69 ADDAVDLFRDMIQ--SRPLPTVIDFNRLFSAIAKTKQY-ELVLALCKQMESKGIAHSIYT 125
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+IM+ FC +S A++ K+ + G PD + L+ GLC + +V+ A++L++ M+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 264 NKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAI 323
G P ++ TL+N LC K+ +A L+ RM G P+ V Y V+ C+ G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
A ++L M + V Y ++ GLC G D A M KGF + LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
GFCN G+ D+ +L +++K +P+ T+ +++ ++ + ++L E+++ I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 444 GDT 446
+T
Sbjct: 366 PNT 368
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 1/323 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+ LI + + D K R M++ P + +++ V LR A L K
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE-GKLREADQLLKEM 359
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G+ PNT +YN ++ FC + A + + M +G PD+ ++ IL+ G C+ +++
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ ++L +M +G + +T++Y TL+ C+ KL A KL M + PDIV Y +
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ G C G A ++ + + ++ Y ++ G+C+ D A + KG
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
+ +I C + +A + ++ + G AP E T+ +++ ++ E
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 433 VLNEIVKVEIKGDTRIVEAGIGL 455
++ E+ D V+ I +
Sbjct: 600 LIEEMKSSGFPADVSTVKMVINM 622
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 3/300 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ T+ LI + + A + + M++ P N +++ N L A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE-NRLEEA 387
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ G P+ ++NI++ +C I LF +M RGV+ + +Y L+QG
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++ A L ++M+++ PD +SY LL+ LC +L +A ++ +++ D
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I Y ++ G C + DA + +P G + +Y ++ LC + A +
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M +G +P + LI+ A ++EE+ +G T M++ + +GE
Sbjct: 568 KMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ + AVDL DM+ +P + + L +++ + K+ L +M+ KG I +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR + A + + G P+ V + TL+ GLC + A + + M+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G P + L+ G C GKV +A +++ +++ G P+E T+ ++ +C +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 431 GEVLNEIVKVEIKGDT 446
E+L ++ + IK D
Sbjct: 248 MELLRKMEERNIKLDA 263
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 122 KSEHYPVTPSLFTYLIKIYAESNLP--DRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K E + + Y+I I+ N D A F S+ K + N ++ L +
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC-RK 556
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ L A LF+ + G P+ +YNI++RA + D + A L +M G DV +
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV 616
Query: 240 RILMQGL 246
++++ L
Sbjct: 617 KMVINML 623
>sp|Q9LUD6|PP230_ARATH Pentatricopeptide repeat-containing protein At3g14580,
mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2
SV=1
Length = 405
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 168/316 (53%), Gaps = 3/316 (0%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILIT 120
+P V K+ + DP + + S++ +++ + S Y ++I K G+AK + I++++ T
Sbjct: 61 APNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRT 120
Query: 121 LKSEHY-PVTPSLFTYLIKIYAE-SNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTH 178
+K E + F L++IY + +RA++ M +F C P K N IL LLV+
Sbjct: 121 IKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSA 180
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
+ + +F SA K GV + NI+++ C +G++ A L ++ ++ P+V +
Sbjct: 181 KLF-DEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMT 239
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L++G C K + A LLE M + PDT+++ L++ L +K ++ E LL RMK
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
VKGC P+ Y V+ G + R ++A +++ M S G P+ +SY+ +V GLC+
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVV 359
Query: 359 VAKKYMQLMISKGFSP 374
++ M++ GF P
Sbjct: 360 EMDWVLRQMVNHGFVP 375
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++NRA+++L M + G P + S+ +LN L K E +K+ G D N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ G C G A ++L++ P PN++++ L+ G C++G F+ A K ++ M +
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
P + LI G G+V+E +LE + G P+ T+
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY 310
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 2/184 (1%)
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV-KGCN-PDIVHYNTVVLGFCREGRA 322
K + P Y ++N + K E +++ +K+ K C + YN + + GR
Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRI 148
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
A ++L MP GC P+ S+ ++ L +FD K G + L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
IKG C G ++ A +L+E + P+ T+ ++ C + E+ ++L + K I
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 443 KGDT 446
+ DT
Sbjct: 269 EPDT 272
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F+ LI+ + + A K M + +P N ++ L + + DL +
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL-RKKGRVEEGIDLLERM 298
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
G PN +Y ++ A + ++M G+ P SY+ ++ GLC V
Sbjct: 299 KVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRK 284
+L M+N GFVP TL + ++ + K
Sbjct: 359 VEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSK 390
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 177/353 (50%), Gaps = 2/353 (0%)
Query: 91 FRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRAL 150
F H+ S L +I +++F+ + +SE L+ +I Y +S + ++
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSI 114
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
F M++ P N +L +V ++ + F + +K V+ + S+ I+++
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF--NQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C G+I ++ L ++ E G P+V Y L+ G C+K ++ +A DL +M G V +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
+YT L+N L + ++ +++ +M+ G P++ YN V+ C++GR DA +V +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+M G N+V+Y TL+GGLC + + A K + M S G +P+ + LI GFC VG
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
K+ +A + +L G +P T+ ++V C + +++ E+ + IK
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 132/243 (54%), Gaps = 6/243 (2%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
+ F++++ + GV PN +YN +M C +G A+ +F++M ERGV ++ +Y L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ GLCR+ ++N A +++ M + G P+ ++Y TL++ C KL +A L +K +G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+P +V YN +V GFCR+G A K++++M G P+ V+Y L+ D +K
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS---DNMEK 426
Query: 363 YMQLMISK---GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
+QL +S G P LI GFC G+++EA + + +++ P+E + ++
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 420 QIC 422
C
Sbjct: 487 GYC 489
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
F LIK E+ +++ + EF P +++ + + A DLF
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG-CCKKGEIEKAKDLFFEM 224
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G++ N ++Y +++ NG + ++ KM E GV P++ +Y +M LC+ +
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + ++M +G + ++Y TL+ LCR+ KL EA K++ +MK G NP+++ YNT+
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ GFC G+ A + D+ S G P+LV+Y LV G C +G A K ++ M +G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P LI F +++A + + + G P T+ +++ C +M +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 433 VLNEIVK 439
+ +V+
Sbjct: 465 LFKSMVE 471
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 106/197 (53%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A L + G+ P+ +YNI++ FC GD S A + +M ERG+ P +Y I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ R + +A+ L M G VPD +Y+ L++ C K ++ EA +L M K
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
C P+ V YNT++LG+C+EG + A K+L++M PN+ SYR ++ LC + A+
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 362 KYMQLMISKGFSPHFSV 378
+ ++ MI G P S+
Sbjct: 534 RLVEKMIDSGIDPSTSI 550
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 120/236 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A + G+ PN +YN ++ FC G + A +L + RG+ P + +Y I
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G CRK + A ++++M +G P ++YT L+++ R + +A +L M+ G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+ Y+ ++ GFC +G+ +A ++ + M C PN V Y T++ G C +G A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
K ++ M K +P+ + +I+ C K EA ++E+++ +G P +I
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+M NG +P + L+ + F+ + SK +S LIKG C
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFG-ILIKGCCE 175
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
G+++++ +L EL + G +P+ + ++ C E+EK ++ E+ K+ + + R
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN N+ L L ++ +LID ++ P LFTY ++ +
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR------GCQPDLFTYGTVVNGLCKRGD 235
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D AL + M + + I++ L ++N + A +LF G+ PN +YN
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYN 294
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++R C G S A L + M ER + P+V ++ L+ ++ ++ A L ++M+ +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
PD +Y++L+N C +L EA + M K C P++V YNT++ GFC+ R +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
++ +M G + N V+Y TL+ GL G D+A+K + M+S G P L+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L K+ P T+ +++ +C ++E
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ ++ L++Y I I S LP AL M++ +P L+
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP-LALAVLGKMMKLGYEPDIVTLSS 155
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L PNT ++N ++ + S A L ++M R
Sbjct: 156 LLNG-YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y ++ GLC++ ++ A+ LL+ M D + YTT++++LC K + +A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M KG P++V YN+++ C GR DA ++L DM PN+V++ L+
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K MI + P +LI GFC ++DEA + E ++ P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ E+ E+ + + G+T
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 169/383 (44%), Gaps = 3/383 (0%)
Query: 58 PIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNS--TYLILILKLGRAKYFSLID 115
P+ S KL+++ + + R N R S +Y ILI R L
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 116 DILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELL 175
+L + Y + L+ Y A+ M +P N ++ L
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 176 VTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPD 235
H N A L G P+ +Y ++ C GDI +A +L KM + + D
Sbjct: 196 FLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLC 295
V Y ++ LC VN A++L +M NKG P+ ++Y +L+ LC + +A +LL
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 296 RMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
M + NP++V ++ ++ F +EG+ ++A K+ ++M P++ +Y +L+ G C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 356 MFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWV 415
D AK +LMISK P+ + LIKGFC +V+E + E+ + G + T+
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 416 MIVPQICAGEEMEKLGEVLNEIV 438
++ + + + ++ ++V
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMV 457
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P +FTY LI + + D A F M+ +C P N +++ + +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR-VEEG 414
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +YN +++ GD +A +F KM GV PD+ +Y IL+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + PD +Y ++ +C+ K+ + + L C + +KG P+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y T++ GFCR+G +A + +M +G LPN +Y TL+ G + + ++
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 366 LMISKGF 372
M S GF
Sbjct: 595 EMRSCGF 601
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF + LP+ +N ++ A + +L +M + D+ SY I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ PD ++ ++LLN C K++ EA L+ +M V
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+L +Y T+V GLC +G D+A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M + +I CN V++A + E+ G P+ T+ ++ +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 301 CNYGRWSDASRLLSDMIERKI 321
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 3/299 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI + + A K + M++ + P + ++ H + L A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEA 379
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F+ PN +YN +++ FC + LF +M +RG++ + +Y L+QG
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
L + + A + + M++ G PD ++Y+ LL+ LC+ KL +A + ++ PD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YN ++ G C+ G+ D + + G PN++ Y T++ G C +G+ + A +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M G P+ + LI+ G + +++E+ G T M++ + G
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 230 RGVMPDVESYRI---LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
RGV SY L + + +++ AVDL +M+ +P + + LL+++ + K
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L RM+ + D+ YN ++ FCR + A VL M G P++V+ +
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C A + M + P+ + LI G K EA +++ ++ G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD----TRIVEA 451
P T+ +V +C +++ +L ++ K +I+ D T I++A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
>sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630
OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1
Length = 477
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 164/335 (48%), Gaps = 3/335 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA + F + Q NFRH+ + Y +L+ + + ++ + + YP T F L
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L ++ F FN +P N IL L+ + Y + +++ + G
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDW-VYEQMLEDG 252
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P+ +YNI+M A G Y L ++M + G PD+ +Y IL+ L ++ A+
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK-GCNPDIVHYNTVVLG 315
+LL M G P + +TTL++ L R KL EA K VK GC PD+V Y ++ G
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
+ G A ++ ++M G LPN+ +Y +++ G C G F A ++ M S+G +P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
F V L+ N GKV EA V++++++ G H
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 7/287 (2%)
Query: 61 SPCRVQKLIASQSDPLLAKEIFD--YASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL 118
+ C LI + + LA+++ + S+ N+R +Y ++ L K + LID +
Sbjct: 186 TACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY 245
Query: 119 ITLKSEHYPVTPSLFTYLIKIYAESNL--PDRALKTFRSMLEFNCKPLPKQLNRILELLV 176
+ + + TP + TY I ++A L DR + M++ P N +L L
Sbjct: 246 EQMLEDGF--TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 177 THRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDV 236
T L A +L + GV P + ++ G + ++ + G PDV
Sbjct: 304 TGNKPL-AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 362
Query: 237 ESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCR 296
Y +++ G ++ +A ++ ++M KG +P+ +Y +++ C K +EA LL
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 422
Query: 297 MKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
M+ +GCNP+ V Y+T+V G+ ++A +V++DM G +L+S
Sbjct: 423 MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 291 YKLLCRM---KVKGCNPDIVHYNTVVLGFCRE-GRAIDACKVLEDMPSNGCLPNLVSYRT 346
YK +CR+ +K P +++ C E G A D + + P SY
Sbjct: 168 YKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNA 227
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ L + + + M+ GF+P + ++ +GK D +L+E++K G
Sbjct: 228 ILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDG 287
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
+P T+ +++ + G + +LN + +V ++
Sbjct: 288 FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 8/340 (2%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
+ +LGR K +L+ ++ + Y TP + +Y ++ Y D+ K M
Sbjct: 255 FVCQLGRIKE---AHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
KP I+ LL L A + F + G+LP+T Y ++ FC GDI
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A F +M R + PDV +Y ++ G C+ + A L +M KG PD++++T L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
N C+ +++A+++ M GC+P++V Y T++ G C+EG A ++L +M G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+ +Y ++V GLC G + A K + + G + L+ +C G++D+A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
L+E+L G P T+ +++ C +E ++LN ++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 15/391 (3%)
Query: 53 SNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFS 112
S S + S C V L + D +A+ + +P ++S +
Sbjct: 113 SRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDS-------------FVQ 159
Query: 113 LIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRIL 172
D ++ T K + P +F ++ + L A + F ML + N L
Sbjct: 160 FFDLLVYTYKD--WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYL 217
Query: 173 ELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGV 232
L A +F+ + GV N SYNI++ C G I A+ L M +G
Sbjct: 218 TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 233 MPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYK 292
PDV SY ++ G CR ++++ L+E M KG P++ Y +++ LCR KL EA +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLC 352
M +G PD V Y T++ GFC+ G A K +M S P++++Y ++ G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 353 DQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHED 412
G A K M KG P LI G+C G + +A V +++AG +P+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 413 TWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
T+ ++ +C +++ E+L+E+ K+ ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 179 RNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVES 238
R +R A F H + P+ +Y ++ FC GD+ A LF++MF +G+ PD +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+ L+ G C+ + A + M+ G P+ ++YTTL++ LC++ L A +LL M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G P+I YN++V G C+ G +A K++ + + G + V+Y TL+ C G D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A++ ++ M+ KG P + L+ GFC G +++ +L +L G AP+ T+ +V
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRIVE 450
Q C ++ + ++ + D + E
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 132/253 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LF G+ P++ ++ ++ +C G + A+ + N M + G P+V +Y L+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC++ ++ A +LL +M G P+ +Y +++N LC+ + EA KL+ + G N
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
D V Y T++ +C+ G A ++L++M G P +V++ L+ G C GM + +K +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M++KG +P+ + ++L+K +C + A + +++ G P T+ +V C
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 425 EEMEKLGEVLNEI 437
M++ + E+
Sbjct: 645 RNMKEAWFLFQEM 657
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 7/327 (2%)
Query: 128 VTPSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLNRILELLVTH--RNYLR 183
+TP + TY I + D A K F M CK L EL+ + +++
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF---CKGLEPDSVTFTELINGYCKAGHMK 438
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
AF + + G PN +Y ++ C GD+ A L ++M++ G+ P++ +Y ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC+ + AV L+ + G DT++YTTL+++ C+ ++ +A ++L M KG
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P IV +N ++ GFC G D K+L M + G PN ++ +LV C + A
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+ M S+G P L+KG C + EA + +E+ G + T+ +++
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 424 GEEMEKLGEVLNEIVKVEIKGDTRIVE 450
++ + EV +++ + + D I +
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 1/307 (0%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
FT LI Y ++ A + M++ C P +++ L + L A +L
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEM 482
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K G+ PN +YN ++ C +G+I A L + G+ D +Y LM C+ ++
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
++A ++L++ML KG P +++ L+N C L + KLL M KG P+ +N++
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V +C A + +DM S G P+ +Y LV G C A Q M KGF
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
S S LIKGF K EA V +++ + G A ++ + G+ + + +
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Query: 433 VLNEIVK 439
++EI++
Sbjct: 723 PIDEIIE 729
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 129/323 (39%), Gaps = 30/323 (9%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
RA RS+ + CK + + ++ +L+ + R D F A N +S I+
Sbjct: 70 RAEPLRRSLKPYECKF---KTDHLIWVLMKIKCDYRLVLDFFDWARSRRD-SNLESLCIV 125
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESY---------------------RILMQGL 246
+ + D+ +A +L + +ER + +S+ + Q L
Sbjct: 126 IHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVL 185
Query: 247 CRKSQVNRAVDLLEDMLNKGFVPDTLS---YTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
+ A + E MLN G V S Y T L+ C K A + G
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAIIVFREFPEVGVC 243
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
++ YN V+ C+ GR +A +L M G P+++SY T+V G C G D K
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
+++M KG P+ + ++I C + K+ EA E+++ G P + ++ C
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 424 GEEMEKLGEVLNEIVKVEIKGDT 446
++ + E+ +I D
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDV 386
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 1/143 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
+ F L+K Y N A ++ M P K +++ RN ++ A+ LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN-MKEAWFLF 654
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
+ G + +Y+++++ F A +F++M G+ D E + +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Query: 250 SQVNRAVDLLEDMLNKGFVPDTL 272
+ + VD +++++ V + L
Sbjct: 715 KRPDTIVDPIDEIIENYLVDEQL 737
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY ILI R SL +L + Y L+ + N A+
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P N ++ L H N A L G P+ +Y I++ C
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A +L KM + + P V Y ++ LC VN A++L +M NKG P+ +
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L+ LC + +A +LL M + NP++V ++ ++ F +EG+ ++A K+ ++M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++ +Y +L+ G C D AK +LMISK P+ + LIKGFC +V
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
DE + E+ + G + T+ ++ E + V ++V
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 3/301 (0%)
Query: 130 PSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY I + + D AL + M + +P N I++ L ++N + A +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN-VNDALN 277
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ PN +YN ++R C G S A L + M ER + P+V ++ L+
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P++V
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R + ++ +M G + N V+Y TL+ G D A+ + M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G CN GKV+ A V E L ++ P T+ +++ +C ++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 428 E 428
E
Sbjct: 518 E 518
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 165/335 (49%), Gaps = 5/335 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L + ++ ++ +L+TY LI + + AL M++ +P LN +
Sbjct: 98 DLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL 157
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L H N + A L + G P++ ++N ++ + S A L ++M +G
Sbjct: 158 LNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
PD+ +Y I++ GLC++ ++ A+ LL+ M P + Y T++++LC K + +A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M KG P++V YN+++ C GR DA ++L DM PN+V++ L+
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+G A+K MI + P +LI GFC ++DEA + E ++ P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +++ E+ E+ + + G+T
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + +++L + N L + G+ N +Y
Sbjct: 63 DDAVNLFGDMVK--SRPFPSIVEFSKLLSA-IAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ FC +S+A + KM + G PD+ + L+ G C ++++ AV L+ M+
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ PD+ ++ TL++ L R + EA L+ RM VKGC PD+V Y VV G C+ G
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L+ M P +V Y T++ LC+ + A M +KG P+ ++LI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN G+ +A +L ++++ P+ T+ ++ ++ + ++ +E++K I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 445 D 445
D
Sbjct: 360 D 360
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 130/261 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF K P+ ++ ++ A + +L +M G+ ++ +Y I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ++ A+ +L M+ G+ PD ++ +LLN C ++ +A L+ +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD +NT++ G R RA +A +++ M GC P+LV+Y +V GLC +G D+A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
++ M P + + +I CN V++A + E+ G P+ T+ ++ +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 422 CAGEEMEKLGEVLNEIVKVEI 442
C +L+++++ +I
Sbjct: 302 CNYGRWSDASRLLSDMIERKI 322
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 153/342 (44%), Gaps = 3/342 (0%)
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQ 167
Y ++ D + + + ++ + P++ TY LI+ A + M+E P
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
+ +++ V L A L+ K + P+ +Y+ ++ FC + + A +F M
Sbjct: 329 FSALIDAFVKE-GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKL 287
+ P+V +Y L++G C+ +V+ ++L +M +G V +T++YTTL++ + ++
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 288 REAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTL 347
A + +M G PDI+ Y+ ++ G C G+ A V E + + P++ +Y +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 348 VGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGE 407
+ G+C G + + KG P+ ++ GFC G +EA + E+ + G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 408 APHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
P T+ ++ + E++ E+ GD +
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 248 RKSQVNR--------AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV 299
RK +NR AV+L DM+ P + ++ LL+++ + K L +M+
Sbjct: 50 RKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 109
Query: 300 KGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDV 359
G + ++ Y+ ++ FCR + A VL M G P++V+ +L+ G C
Sbjct: 110 LGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 360 AKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVP 419
A + M+ G+ P + LI G + EA +++ ++ G P T+ ++V
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 420 QIC 422
+C
Sbjct: 230 GLC 232
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ + + AL F + +P N ++E + +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVEDG 520
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+DLF S GV PN +Y MM FC G A LF +M E G +PD +Y L++
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 324 DACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALI 383
DA + DM + P++V + L+ + FD+ + M + G S + LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIK 443
FC ++ A VL +++K G P T ++ C G + ++ ++V++ +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 444 GDT 446
D+
Sbjct: 184 PDS 186
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H++ TY ILI R L +L + Y + L+ Y S A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M +P N ++ L H N A L G P+ +Y +++ C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A+ L NKM + + P V Y ++ GLC+ ++ A++L ++M KG P+ +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NPD+ ++ ++ F +EG+ ++A K+ ++M
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++V+Y +L+ G C D AK+ + M+SK P + LIKGFC +V
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+E V E+ + G + T+ +++ + + + E+ E+V
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYA--ESNL 145
QPN N+ L L ++ +LID ++ P L TY + + +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK------GCQPDLVTYGVVVNGLCKRGD 236
Query: 146 PDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYN 205
D A M + +P N I++ L ++ ++ A +LFK G+ PN +Y+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTYS 295
Query: 206 IMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNK 265
++ C G S A L + M ER + PDV ++ L+ ++ ++ A L ++M+ +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
P ++Y++L+N C +L EA ++ M K C PD+V YNT++ GFC+ R +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKG 385
+V +M G + N V+Y L+ GL G D+A++ + M+S G P+ + L+ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
C GK+++A V E L ++ P T+ +++ +C ++E
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 142/270 (52%), Gaps = 4/270 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ PS+ TY LI + + D A + F M+ +C P N +++ ++ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR-VEEG 415
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F+ + G++ NT +YNI+++ GD +A +F +M GV P++ +Y L+ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ ++ +A+ + E + P +Y ++ +C+ K+ + + L C + +KG PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ GFCR+G +A + ++M +G LPN Y TL+ G + + + ++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
M S GF+ S + L+ + G++D++
Sbjct: 596 EMRSCGFAGDAS-TIGLVTNMLHDGRLDKS 624
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 116 DILITL--KSEHYPVTPSLFTYLIKIYA---ESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
D++I+L + ++ + + +TY I I S LP AL M++ +P L+
Sbjct: 98 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSS 156
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+L H + A L G PNT ++N ++ + S A L ++M +
Sbjct: 157 LLNGYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
G PD+ +Y +++ GLC++ + A +LL M P L Y T+++ LC+ K + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
L M+ KG P++V Y++++ C GR DA ++L DM P++ ++ L+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+G A+K M+ + P +LI GFC ++DEA + E ++ P
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E+ EV E+ + + G+T
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + +++L + N L + G+ N +Y
Sbjct: 63 DDAVALFGEMVK--SRPFPSIIEFSKLLSA-IAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I++ FC + +A + KM + G P++ + L+ G C +++ AV L++ M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ P+T+++ TL++ L K EA L+ RM KGC PD+V Y VV G C+ G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P ++ Y T++ GLC D A + M +KG P+ +LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
CN G+ +A +L ++++ P T+ ++ ++ + ++ +E+VK I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 134/272 (49%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A LF K P+ ++ ++ A + +L +M G+ + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ CR+SQ+ A+ +L M+ G+ P+ ++ ++LLN C K++ EA L+ +M V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
P+ V +NT++ G +A +A +++ M + GC P+LV+Y +V GLC +G D+A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ M P + + +I G C +D+A + +E+ G P+ T+ ++ +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
C +L+++++ +I D A I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%)
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+++ AV L +M+ P + ++ LL+++ + K L +M+ G + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++ FCR + A VL M G PN+V+ +L+ G C A + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKL 430
G+ P+ + LI G K EA +++ ++ G P T+ ++V +C + +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 431 GEVLNEI 437
+LN++
Sbjct: 241 FNLLNKM 247
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 3/332 (0%)
Query: 125 HYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYL 182
Y P TY ++ +S AL FR M E N K Q + +++ L ++
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF- 261
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRIL 242
A LF G+ + +Y+ ++ C +G + +M R ++PDV ++ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 243 MQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
+ ++ ++ A +L +M+ +G PDT++Y +L++ C++ L EA ++ M KGC
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
PDIV Y+ ++ +C+ R D ++ ++ S G +PN ++Y TLV G C G + AK+
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 363 YMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
Q M+S+G P L+ G C+ G++++A + E++ K+ + +I+ +C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 423 AGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIG 454
+++ + + +K D IG
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
AL M+E+ +P +L L N A DLF+ + + + Y+I++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS-ALALDLFRKMEERNIKASVVQYSIVI 252
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ C +G A +LFN+M +G+ DV +Y L+ GLC + + +L +M+ + +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++++ L++ ++ KL EA +L M +G PD + YN+++ GFC+E +A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
+ M S GC P++V+Y L+ C D + + + SKG P+ + L+ GFC
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
GK++ A + +E++ G P T+ +++ +C E+ K E+ ++ K +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT----- 487
Query: 449 VEAGIGLEDYLI 460
GIG+ + +I
Sbjct: 488 --LGIGIYNIII 497
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 128/226 (56%)
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
++P+ +++ ++ F G + A L+N+M RG+ PD +Y L+ G C+++ ++ A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
+ + M++KG PD ++Y+ L+NS C+ K++ + +L + KG P+ + YNT+VLGF
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
C+ G+ A ++ ++M S G P++V+Y L+ GLCD G + A + + M +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ + +I G CN KVD+A + L G P T+ +++ +C
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
AF + A K G P+T +++ ++ FC G +S A L ++M E PD+ + L+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC K +V+ A+ L++ M+ GF PD ++Y +LN LC+ A L +M+ +
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+V Y+ V+ C++G DA + +M G ++V+Y +L+GGLC+ G +D K +
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ MI + P ALI F GK+ EA + E++ G AP T+ ++ C
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 7/371 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKS-EHYPVTPSLFTY--LIKIYAESN 144
+ N + S Y I+I L + F DD L E + + TY LI
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSF---DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 145 LPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D K R M+ N P + ++++ V L A +L+ G+ P+T +Y
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMITRGIAPDTITY 353
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N ++ FC + A +F+ M +G PD+ +Y IL+ C+ +V+ + L ++ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
KG +P+T++Y TL+ C+ KL A +L M +G P +V Y ++ G C G
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A ++ E M + + Y ++ G+C+ D A + KG P + +I
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
G C G + EA + ++ + G P + T+ +++ G + E++ E+
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Query: 445 DTRIVEAGIGL 455
D+ ++ I +
Sbjct: 594 DSSTIKMVIDM 604
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 1/298 (0%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
A+ F SM++ P P NR+ + + Y K +G+ + + IM+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY-DLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+C + A+++ + ++ G PD ++ L+ G C + +V+ AV L++ M+
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKV 328
PD ++ +TL+N LC K ++ EA L+ RM G PD V Y V+ C+ G + A +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 329 LEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCN 388
M ++V Y ++ LC G FD A M KG +LI G CN
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 389 VGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
GK D+ +L E++ P T+ ++ ++ + E+ NE++ I DT
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 48/269 (17%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP- 184
+ P TY LI + + N A + F M+ C+P I+ + +Y +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP------DIVTYSILINSYCKAK 399
Query: 185 ----AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
LF+ G++PNT +YN ++ FC +G ++ A LF +M RGV P V +Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 241 ILMQGLCRKSQVNRAVDLLEDML-----------------------------------NK 265
IL+ GLC ++N+A+++ E M +K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDA 325
G PD ++Y ++ LC+K L EA L +MK GC PD YN ++ I +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 326 CKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+++E+M G + + + ++ L D+
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%)
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
H + SY +R + ++ A LF M + +P + L + R Q
Sbjct: 27 HYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY 86
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
+ + + M G D + T ++N CRKKKL A+ +L R G PD + ++T+
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
V GFC EGR +A +++ M P+LV+ TL+ GLC +G A + M+ GF
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGE 432
P ++ C G A + ++ + + +++ +C +
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 433 VLNEIVKVEIKGDTRIVEAGIG 454
+ NE+ IK D + IG
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIG 288
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFR 154
TY L+L ++ + ++ + S P PS+ TY L+ ++ ++AL+ F
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 155 SMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFN 214
M + + L + I+ + + + + A+ LF S GV P+ +YN+M+ C
Sbjct: 480 KM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 215 GDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
G +S A LF KM E G PD +Y IL++ S + +V+L+E+M GF D+ +
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 275 TTLLNSLCRKK 285
+++ L ++
Sbjct: 599 KMVIDMLSDRR 609
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 161/350 (46%), Gaps = 1/350 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY I I R SL +L + Y + L+ Y S A+
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E KP ++ L H N A L + G P+ +Y ++ C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A +L KM + + DV Y ++ GLC+ ++ A++L +M NKG PD
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M + NP++V ++ ++ F +EG+ ++A K+ ++M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++ +Y +L+ G C D AK +LMISK P+ LIKGFC +V
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+E + E+ + G + T+ ++ + + V ++V V +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++ L+TY I + + AL M++ +P L+ +L H + A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC-HSKRISDA 172
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G P+T ++ ++ + S A L ++M +RG PD+ +Y ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ ++ A+ LL+ M D + Y T+++ LC+ K + +A L M KG PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ Y++++ C GR DA ++L DM PN+V++ L+ +G A+K
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI + P +LI GFC ++DEA + E ++ P+ T+ ++ C +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+E+ E+ E+ + + G+T
Sbjct: 413 RVEEGMELFREMSQRGLVGNT 433
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 5/301 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + N++L V N L + G+ + +Y
Sbjct: 65 DDAVDLFGDMVK--SRPFPSIVEFNKLLSA-VAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I + FC +S+A + KM + G PD+ + L+ G C +++ AV L++ M+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ PDT ++TTL++ L K EA L+ +M +GC PD+V Y TVV G C+ G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L+ M ++V Y T++ GLC D A M +KG P +LI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN G+ +A +L ++++ P+ T+ ++ ++ + ++ +E++K I
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 445 D 445
D
Sbjct: 362 D 362
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY ++ + D AL + M + + N I++ L ++ ++ A +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK-HMDDALN 279
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ P+ +Y+ ++ C G S A L + M ER + P+V ++ L+
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P++V
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y+T++ GFC+ R + ++ +M G + N V+Y TL+ G D A+ + M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P+ + L+ G C GK+ +A V E L ++ P T+ +++ +C ++
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 428 EKLGEVL 434
E E+
Sbjct: 520 EDGWELF 526
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 3/346 (0%)
Query: 106 GRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKP 163
G KY + D + + + ++ + P +FTY LI A + M+E P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++ V L A L+ K + P+ +Y+ ++ FC + + A +
Sbjct: 327 NVVTFSALIDAFV-KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F M + P+V +Y L++G C+ +V ++L +M +G V +T++YTTL++ +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVS 343
+ A + +M G +P+I+ YN ++ G C+ G+ A V E + + P++ +
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 344 YRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELL 403
Y ++ G+C G + + + KG SP+ + +I GFC G +EA +L+++
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 404 KAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
+ G P+ T+ ++ + E E++ E+ GD +
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 228 FERGVMPDVESYR-ILMQGLCRKSQVNRAVDLLEDM---------------------LNK 265
+ER YR IL L +V+ AVDL DM +NK
Sbjct: 39 WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98
Query: 266 --------------GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
G D +Y+ +N CR+ +L A +L +M G PDIV ++
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+C R DA +++ M G P+ ++ TL+ GL A + M+ +G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P ++ G C G +D A +L+++ K + I+ +C + M+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD--- 275
Query: 432 EVLNEIVKVEIKG 444
+ LN +++ KG
Sbjct: 276 DALNLFTEMDNKG 288
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY L+ ++ +A+ F + +P N ++E + +
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKVEDG 522
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++LF + GV PN +YN M+ FC G A +L KM E G +P+ +Y L++
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+++M + GF D + + N L
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 210/455 (46%), Gaps = 58/455 (12%)
Query: 52 ISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYF 111
+S + +P S V+KL ++P + ++++ + N RHS TY +L L +A
Sbjct: 63 LSKNLNPFISFEVVKKL---DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLH 119
Query: 112 SLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRA----LKTFRSMLEFNCKPLPKQ 167
L + +KS+ L +L+ +AE A L++F +E C +
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSL 177
Query: 168 LNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM 227
LN +++L + + A LF + +TK++NI++R C G A L M
Sbjct: 178 LNTLVKL-----DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 228 FERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYTTLLNSLCRKKK 286
G PD+ +Y L+QG C+ +++N+A ++ +D+ + PD ++YT++++ C+ K
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 287 LREAYKLL-----------------------------------CRMKVKGCNPDIVHYNT 311
+REA LL +M GC PD+V + +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKG 371
++ G+CR G+ ++ E+M + G PN +Y L+ LC++ A++ + + SK
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 372 FSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLG 431
P + + +I GFC GKV+EA ++EE+ K P + T+ +++ C M +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 432 EVLNEIVKVEIKGD--------TRIVEAGIGLEDY 458
+ +++V + D + +++AG+ E Y
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 1/294 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + N A+ M+E KP N I++ L + + AFD FK +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERK 219
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PN +Y ++ C + S A L + M ++ + P+V +Y L+ + +V A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
+L E+M+ PD ++Y++L+N LC ++ EA ++ M KGC D+V YNT++ G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
FC+ R D K+ +M G + N V+Y TL+ G G D A+++ M G SP
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
+ L+ G C+ G++++A + E++ K T+ ++ +C ++E+
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K E + L+T+ +I + AL ML+ +P + +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
+ RN + A L + G P+ +YN ++ + C ++ A+ F ++ +G
Sbjct: 162 VNGF-CRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+ P+V +Y L+ GLC S+ + A LL DM+ K P+ ++Y+ LL++ + K+ EA
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
+L M +PDIV Y++++ G C R +A ++ + M S GCL ++VSY TL+ G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C + K + M +G + + LI+GF G VD+A ++ G +P
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
T+ +++ +C E+EK + ++ K E+ D
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 129/257 (50%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A DLF K P+ +N ++ A + +L KM G+ D+ ++ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
++ C QV+ A+ +L ML G+ PD ++ +L+N CR+ ++ +A L+ +M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PDIV YN ++ C+ R DA +++ G PN+V+Y LV GLC+ + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + MI K +P+ AL+ F GKV EA + EE+++ P T+ ++ +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 422 CAGEEMEKLGEVLNEIV 438
C + +++ ++ + +V
Sbjct: 306 CLHDRIDEANQMFDLMV 322
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)
Query: 127 PVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
+ P + TY LI + D A + F M+ C N ++ + +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR-VED 348
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
LF+ + G++ NT +YN +++ F GD+ A F++M G+ PD+ +Y IL+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ +A+ + EDM + D ++YTT++ +C+ K+ EA+ L C + +KG P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DIV Y T++ G C +G + + M G + N + G ++ + +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELI 520
Query: 365 QLMISKGFSPHF 376
+ M+S G++P
Sbjct: 521 KKMLSCGYAPSL 532
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 3/292 (1%)
Query: 124 EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNY 181
E + P++ TY L+ S+ A + M++ P + +L+ V +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L A +LF+ + + P+ +Y+ ++ C + I A +F+ M +G + DV SY
Sbjct: 277 LE-AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G C+ +V + L +M +G V +T++Y TL+ + + +A + +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
+PDI YN ++ G C G A + EDM ++V+Y T++ G+C G + A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
+ KG P ++ G C G + E + ++ + G ++ T
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF+ M + P + + L+ + + + + + L + M G D ++ ++N
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
C ++ A +L +M G PD V ++V GFCR R DA +++ M G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
++V+Y ++ LC + A + + + KG P+ AL+ G CN + +A +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+++K P+ T+ ++ ++ + E+ E+V++ I D
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
R ++N A+DL DM+ P + + LL+++ + KK L +M+V G D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+N V+ FC + A +L M G P+ V+ +LV G C + A + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ G+ P +A+I C +V++A +E+ + G P+ T+ +V +C
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 428 EKLGEVLNEIVKVEI 442
+L++++K +I
Sbjct: 242 SDAARLLSDMIKKKI 256
Score = 35.4 bits (80), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%)
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R+ + DA + DM + P++V + L+ + +DV + M G
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +I FC +V A +L ++LK G P T +V C + +++++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 438 VKVEIKGD 445
V++ K D
Sbjct: 182 VEIGYKPD 189
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 174/391 (44%), Gaps = 36/391 (9%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A+ L NKM + DV + ++ LC+ V+ A++L ++M KG P+ +
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ +DM
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC----- 387
P++ +Y +L+ G C D AK+ + M+SK P + LIKGFC
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 388 ------------------------------NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ G D A V ++++ G P T+ ++
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +C ++EK EV + + K EIK D I
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 168/348 (48%), Gaps = 5/348 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K F L+ I + K + ++ +L+TY LI + + AL M++
Sbjct: 16 LLSAIAKMKKFDLV--ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P L+ +L H + A L + G P+T ++ ++ + S
Sbjct: 74 LGYEPSIVTLSSLLNG-YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L ++M +RG P++ +Y +++ GLC++ ++ A +LL M D + + T++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+SLC+ + + +A L M+ KG P++V Y++++ C GR DA ++L DM
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PNLV++ L+ +G F A+K MI + P ++LI GFC ++D+A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E ++ P DT+ ++ C + +E E+ E+ + GDT
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 5/336 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +F +I + D
Sbjct: 147 QPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F+ M +P + ++ L ++ + A L + + PN ++N +
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMIEKKINPNLVTFNAL 261
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G A L + M +R + PD+ +Y L+ G C ++++A + E M++K
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD +Y TL+ C+ K++ + +L M +G D V Y T++ G +G +A K
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G P++++Y L+ GLC+ G + A + M + +I+G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
GKVD+ + L G P+ T+ ++ +C+
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 4/339 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L K E + P++ TY LI A + M+E P N
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ V ++ A L K + P+ +YN ++ FC + + A +F M +
Sbjct: 261 LIDAFVKEGKFVE-AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PD+++Y L++G C+ +V +L +M ++G V DT++YTTL+ L A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ +M G PDI+ Y+ ++ G C G+ A +V + M + ++ Y T++ G
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C G D + KG P+ + +I G C+ + EA +L+++ + G P
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
T+ ++ + E++ E+ GD +
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%)
Query: 198 LPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
LP+ +N ++ A + +L KM G+ ++ +Y IL+ CR+SQ++ A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
LL M+ G+ P ++ ++LLN C K++ +A L+ +M G PD + + T++ G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
+A +A +++ M GC PNLV+Y +V GLC +G D+A + M +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ + +I C VD+A + +E+ G P+ T+ ++ +C+ ++L+++
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 438 VKVEI 442
++ +I
Sbjct: 247 IEKKI 251
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%)
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
+P + LL+++ + KK L +M+ G + ++ YN ++ FCR + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
+L M G P++V+ +L+ G C A + M+ G+ P LI G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTR 447
K EA +++ +++ G P+ T+ ++V +C +++ +LN++ +I+ D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 448 I 448
I
Sbjct: 187 I 187
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+DLF S GV PN +YN M+ C + AY L KM E G +PD +Y L++
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 175/345 (50%), Gaps = 7/345 (2%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEH-YPVTPSLFTY 135
L F +A++QP + HS Y ++ L + + F + ++ ++ E+ + P LF
Sbjct: 129 LGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVV 188
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L++ +A +++ +A++ M +F +P +L+ L H + ++ A LF+
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGS-VKDAAKLFEDMRMR 247
Query: 196 GVLP-NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR 254
P N + + ++ +C G + A + +M E G PD+ Y L+ G ++
Sbjct: 248 --FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A DLL DM +GF P+ YT L+ +LC+ ++ EA K+ M+ C D+V Y +V
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 315 GFCREGRAIDACK-VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFS 373
GFC+ G+ ID C VL+DM G +P+ ++Y ++ + F+ + M+ M +
Sbjct: 366 GFCKWGK-IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 374 PHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
P + + +I+ C +G+V EA + E+ + G +P DT+V+++
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 204 YNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDML 263
+ ++++ F + A + ++M + G PD + L+ LC+ V A L EDM
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 264 NKGFVPDTLSY-TTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+ P L Y T+LL CR K+ EA +L +M G PDIV Y ++ G+ G+
Sbjct: 246 MR--FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
DA +L DM G PN Y L+ LC + A K M AL
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 383 IKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEI 442
+ GFC GK+D+ VL++++K G P E T++ I+ E E+ E++ ++ ++E
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 443 KGDTRIVEAGIGL 455
D I I L
Sbjct: 424 HPDIGIYNVVIRL 436
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+DL + + G PN Y ++++A C + A +F +M DV +Y L+
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G C+ ++++ +L+DM+ KG +P L+Y ++ + +K+ E +L+ +M+ +P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
DI YN V+ C+ G +A ++ +M NG P + ++ ++ GL QG A +
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 365 QLMISKGFSPHFSVSH 380
+ M+++G FSVS
Sbjct: 486 KEMVTRGL---FSVSQ 498
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 236 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS---YTTLLNSLCRKKKLREAYK 292
+E Y+ +++ L + Q L+E+M + P + + L+ +++A +
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKEN--PQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 293 LLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP-NLVSYRTLVGGL 351
+L M G PD + ++ C+ G DA K+ EDM P NL + +L+ G
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGW 262
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C G AK + M GF P L+ G+ N GK+ +A +L ++ + G P+
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ + +++ +C + ME+ +V E+ + E + D
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 1/346 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H+ TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A+ L NKM + +V Y ++ LC+ + A++L +M NKG P+ +
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC ++ +A +LL M + NP++V +N ++ F +EG+ ++A K+ ++M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P++ +Y +L+ G C D AK +LMISK P+ + LI GFC ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
DE + E+ + G + T+ ++ + + V ++V
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 40/320 (12%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +PLP + N++L + + + L + + G+ N +Y
Sbjct: 67 DDAIGLFGGMVK--SRPLPSIFEFNKLLSAIAKMKKF-DLVISLGEKMQRLGISHNLYTY 123
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NI++ FC IS+A L KM + G P + + L+ G C +++ AV L++ M+
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG---- 320
G+ PDT+++TTL++ L K EA L+ RM +GC P++V Y VV G C+ G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 321 -------------------------------RAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
DA + +M + G PN+++Y +L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
LC+ + A + + MI + +P+ +ALI F GK+ EA + +E++K P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 410 HEDTWVMIVPQICAGEEMEK 429
T+ ++ C + +++
Sbjct: 364 DIFTYSSLINGFCMHDRLDE 383
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 167/348 (47%), Gaps = 5/348 (1%)
Query: 101 LILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLE 158
L+ + + K F L+ I + K + ++ +L+TY LI + + AL M++
Sbjct: 91 LLSAIAKMKKFDLV--ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 159 FNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDIS 218
+P L+ +L H + A L + G P+T ++ ++ + S
Sbjct: 149 LGYEPSIVTLSSLLNGY-CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 219 IAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLL 278
A L ++M +RG P++ +Y +++ GLC++ ++ A +LL M + + Y+T++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 279 NSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCL 338
+SLC+ + +A L M+ KG P+++ Y++++ C R DA ++L DM
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 339 PNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV 398
PN+V++ L+ +G A+K MI + P +LI GFC ++DEA +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 399 LEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
E ++ P+ T+ ++ C + +++ E+ E+ + + G+T
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +LF GV PN +Y+ ++ C S A L + M ER + P+V ++ L+
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
++ ++ A L ++M+ + PD +Y++L+N C +L EA + M K C P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
++V YNT++ GFC+ R + ++ +M G + N V+Y TL+ G D A+
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M+S G P+ + L+ G C GK+++A V E L ++ P T+ +++ +C
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 425 EEME 428
++E
Sbjct: 519 GKVE 522
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 153/335 (45%), Gaps = 5/335 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +++ +I + D
Sbjct: 222 QPNL----VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F M +P + ++ L + + A L + + PN ++N +
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERW-SDASRLLSDMIERKINPNVVTFNAL 336
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G + A L+++M +R + PD+ +Y L+ G C +++ A + E M++K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
P+ ++Y TL+N C+ K++ E +L M +G + V Y T++ GF + +A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G PN+++Y TL+ GLC G + A + + P + +I+G C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
GKV++ + L G P + ++ C
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L A LF K LP+ +N ++ A + +L KM G+ ++
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ CR+SQ++ A+ LL M+ G+ P ++ ++LLN C K++ +A L+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD + + T++ G +A +A +++ M GC PNLV+Y +V GLC +G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+A + M + + + +I C D+A + E+ G P+ T+ +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI 442
+ +C E +L+++++ +I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKI 326
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 3/307 (0%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
KY D + + + E+ V P++ TY LI A + M+E P
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNK 226
N +++ V L A L+ K + P+ +Y+ ++ FC + + A +F
Sbjct: 332 TFNALIDAFVKE-GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 227 MFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
M + P+V +Y L+ G C+ +++ V+L +M +G V +T++YTTL++ + +
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
A + +M G +P+I+ YNT++ G C+ G+ A V E + + P + +Y
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
++ G+C G + + KG P + + +I GFC G +EA + ++ + G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 407 EAPHEDT 413
P T
Sbjct: 571 PLPDSGT 577
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 3/225 (1%)
Query: 220 AYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLN 279
A LF M + +P + + L+ + + + + + L E M G + +Y L+N
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 280 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLP 339
CR+ ++ A LL +M G P IV ++++ G+C R DA +++ M G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 340 NLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVL 399
+ +++ TL+ GL A + M+ +G P+ ++ G C G +D A +L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 400 EELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
++ A + + ++ +C + + LN ++E KG
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHED---DALNLFTEMENKG 290
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%)
Query: 239 YRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
YR +++ +++ A+ L M+ +P + LL+++ + KK L +M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
G + ++ YN ++ FCR + A +L M G P++V+ +L+ G C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
A + M+ G+ P LI G K EA +++ +++ G P+ T+ ++V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 419 PQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+C +++ +LN++ +I+ + I
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 186/437 (42%), Gaps = 76/437 (17%)
Query: 61 SPCRVQKLIASQSDPLLAKEIF---DYASRQPN--FRHSNSTYLILILKLGRAKYFSLID 115
S R+ L+ ++DP A ++F D S P FR+S Y I+I KLG +K F +D
Sbjct: 8 SSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELD 67
Query: 116 DILITLKSEHYPV-TPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPK-------- 166
+L+ LK++ V T +F +I + LP RAL F M ++ C+ K
Sbjct: 68 QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSA 127
Query: 167 -----QLNRILELLVTHRNYLRP--------------------AFDLFKSAHKHGVLPNT 201
+L ++ E L + + +P A LF K V P
Sbjct: 128 LLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTG 187
Query: 202 KSYNIMMRAFCFNGDISIAYTLFNKMFE-RGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
++ ++ C + + A + + M + GV P V Y L++ LC+ +++ A L +
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKD 247
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
+ D Y+TL++SL + + E +L M KGC PD V YN ++ GFC E
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 321 RAIDACKVL-----------------------------------EDMPSNGCLPNLVSYR 345
+ A +VL EDMP GC P+ +SYR
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 346 TLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKA 405
+ GLC+ F+ A + M+ KG+ P ++ C GK++ V+ L +
Sbjct: 368 IVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR- 426
Query: 406 GEAPHEDTWVMIVPQIC 422
G A D W +++P +C
Sbjct: 427 GIAGDADVWSVMIPTMC 443
>sp|Q84VG6|PP160_ARATH Pentatricopeptide repeat-containing protein At2g17525,
mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2
SV=2
Length = 626
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 6/339 (1%)
Query: 65 VQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITL-KS 123
+ +LI Q A E F +AS P F HS STY L KL + F + +L + S
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 124 EHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLR 183
P ++F +I+ + + L R + + +F KP K N IL++LV +
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
F + G+ + +Y I+M+ I + L M GV P+ Y L+
Sbjct: 166 REF-FTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLL 224
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
LC+ +V RA L+ +M P+ +++ L+++ C ++KL ++ LL + G
Sbjct: 225 HALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
PD+V V+ C EGR +A +VLE + S G ++V+ TLV G C G VA+++
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
M KG+ P+ + LI G+C+VG +D A ++
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM 379
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 157/381 (41%), Gaps = 54/381 (14%)
Query: 104 KLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKP 163
K+GRA+ +L SE F LI Y +++ P
Sbjct: 232 KVGRAR----------SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 164 LPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL 223
+ +++E+L + + A ++ + G + + N +++ +C G + +A
Sbjct: 282 DVVTVTKVMEVL-CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 224 FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCR 283
F +M +G +P+VE+Y +L+ G C ++ A+D DM + ++ TL+ L
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 284 KKKLREAYKLLCRMKVKGCNPDIVH------YNTVVLGFCREGRAIDACKVL-------- 329
+ + K+L M+ + D VH YN V+ GF +E R DA + L
Sbjct: 401 GGRTDDGLKILEMMQ----DSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFP 456
Query: 330 -------------------------EDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+ M G +P+++ L+ G + + + +
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
M+++G+ P S +A+I GFC KV +E++ + G P +++ ++ ++C
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Query: 425 EEMEKLGEVLNEIVKVEIKGD 445
+++K + + +V+ I D
Sbjct: 577 GDIQKAWLLFSRMVEKSIVPD 597
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSM----LEFNCKPLPKQLNRILELLVTHRNYLR 183
P++ TY LI Y + + D AL TF M + +N L R L + + L+
Sbjct: 351 PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATF-NTLIRGLSIGGRTDDGLK 409
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKM---FERGVMPDVESYR 240
+ S HG YN ++ F A KM F R V S++
Sbjct: 410 ILEMMQDSDTVHG--ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV---DRSFK 464
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ LC K ++ + M+ +G VP + L++ + K+ E+ +L+ M +
Sbjct: 465 LI--SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR 522
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P +N V++GFC++ + ++ K +EDM GC+P+ SY L+ LC +G D+
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG--DIQ 580
Query: 361 KKYMQL--MISKGFSPHFSVSHALIKGFC 387
K ++ M+ K P S+ +L+ FC
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLM--FC 607
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH----GVLPNTKSYNIMMRAFCFNGDI 217
K P+ ++R +L+ + D K+A+ G +P+ + ++ + +G I
Sbjct: 453 KLFPRAVDRSFKLISLCE---KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
+ L N M RG +P ++ ++ G C++ +V + +EDM +G VPDT SY L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC-REGRAIDACKVLEDM 332
L LC K +++A+ L RM K PD +++++ FC + AI L+D+
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQKTAIHVNSSLQDI 623
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 35/268 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
+R A F + G LPN ++YN+++ +C G + A FN M + + ++
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNK----------------GF------------------ 267
L++GL + + + +LE M + GF
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 268 -VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
P + + L SLC K + + +M +G P I+ + ++ + + G+ ++
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
+++ DM + G LP ++ ++ G C Q K+++ M +G P + L++
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 387 CNVGKVDEACGVLEELLKAGEAPHEDTW 414
C G + +A + +++ P W
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPDPSMW 601
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
LI Y++ + +L+ M+ P N ++ + ++ + + +
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI-IGFCKQDKVMNGIKFVEDMAER 557
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVN 253
G +P+T+SYN ++ C GDI A+ LF++M E+ ++PD + LM L +K+ ++
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIH 615
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 266 GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAID 324
GF+ +Y L + LC ++ Y+LL M G PD + T++ GF R
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM-QLMISKGFSPHFSVSHALI 383
V++ + G P+L + +++ L + + D+A+++ + M++ G L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDI-DIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 384 KGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
KG ++ + +L+ + +G AP+ + ++ +C ++ + +++E+
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 5/336 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIK-IYAESNLPDRALKTFRS 155
TY ILI RA L L + + + V FT L+K + A+ D R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF---KSAHKHGVLPNTKSYNIMMRAFC 212
M E C P N +L+ L N + A +L G P+ SY ++ F
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDE-NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD AY+ +++M +RG++PDV +Y ++ LC+ +++A+++L M+ G +PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y ++L+ C + +EA L +M+ G PD+V Y+ ++ C+ GR ++A K+ + M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
G P + +Y TL+ G +G + LM+ G P V LI + GKV
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEME 428
D+A V ++ + G P+ T+ ++ +C +E
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 151/293 (51%), Gaps = 3/293 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY L+ ++ A K F SM + KP +L+ T + L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT-KGALVEM 355
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L ++G+ P+ ++I++ A+ G + A +F+KM ++G+ P+ +Y ++
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ +V A+ E M+++G P + Y +L++ LC K A +L+ M +G +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ +N+++ C+EGR I++ K+ E M G PN+++Y TL+ G C G D A K +
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
M+S G P+ LI G+C + ++++A + +E+ +G +P T+ +I+
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 149/314 (47%), Gaps = 7/314 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSA 192
+T +I + + D+A T+ ML+ P N I+ L + + A ++ +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA-MDKAMEVLNTM 257
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
K+GV+P+ +YN ++ +C +G A KM GV PDV +Y +LM LC+ +
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 253 NRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 312
A + + M +G P+ +Y TLL K L E + LL M G +PD ++ +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 313 VLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGF 372
+ + ++G+ A V M G PN V+Y ++G LC G + A Y + MI +G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 373 SPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE---EMEK 429
SP V ++LI G C K + A ++ E+L G + + I+ C E EK
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 430 LGEVLNEIVKVEIK 443
L E++ V++ +K
Sbjct: 498 LFELM---VRIGVK 508
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 158/321 (49%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P + TY +I ++ D+A++ +M++ P N IL + + A
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS-GQPKEA 285
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
K GV P+ +Y+++M C NG A +F+ M +RG+ P++ +Y L+QG
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
K + LL+ M+ G PD ++ L+ + ++ K+ +A + +M+ +G NP+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
V Y V+ C+ GR DA E M G P + Y +L+ GLC ++ A++ +
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M+ +G + +++I C G+V E+ + E +++ G P+ T+ ++ C
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+M++ ++L+ +V V +K +T
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNT 546
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 130/262 (49%), Gaps = 4/262 (1%)
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++ A V P+ +Y I++ C G + + + + ++G D ++ L++G
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 246 LCRKSQVNRAVDL-LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM---KVKG 301
LC + + A+D+ L M G +P+ SY LL LC + + +EA +LL M + G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
PD+V Y TV+ GF +EG + A +M G LP++V+Y +++ LC D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+ + M+ G P ++++ G+C+ G+ EA G L+++ G P T+ +++ +
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 422 CAGEEMEKLGEVLNEIVKVEIK 443
C + ++ + + K +K
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLK 333
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 133/263 (50%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A +F + G+ PN +Y ++ C +G + A F +M + G+ P Y L+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
GLC ++ RA +L+ +ML++G +T+ + ++++S C++ ++ E+ KL M G P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYM 364
+++ YNT++ G+C G+ +A K+L M S G PN V+Y TL+ G C + A
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 365 QLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAG 424
+ M S G SP + +++G + A + + ++G T+ +I+ +C
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 425 EEMEKLGEVLNEIVKVEIKGDTR 447
+ + ++ + +++K + R
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEAR 652
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 3/339 (0%)
Query: 98 YLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRS 155
Y+ IL AK + +L+ K + P+ TY +I I +S + A+ F
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 156 MLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNG 215
M++ P N ++ L T + R A +L G+ NT +N ++ + C G
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWER-AEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 216 DISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYT 275
+ + LF M GV P+V +Y L+ G C +++ A+ LL M++ G P+T++Y+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
TL+N C+ ++ +A L M+ G +PDI+ YN ++ G + R A ++ + +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEA 395
G L +Y ++ GLC + D A + Q + + +I VG+ DEA
Sbjct: 611 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+ G P+ T+ ++ I +E+L ++
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 4/268 (1%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL-FNKMFERGVMPDVESYR 240
L F + K G + ++ +++ C + S A + +M E G +P+V SY
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
IL++GLC +++ A++LL M + G PD +SYTT++N ++ +AY M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
+G PD+V YN+++ C+ A +VL M NG +P+ ++Y +++ G C G
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A +++ M S G P L+ C G+ EA + + + K G P T+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ + ++ +L+ +V+ I D
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPD 370
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 218 SIAYTLFNKMFERG---VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSY 274
+ A + +N+M G V PD+ +Y IL+ CR +++ L +++ KGF D +++
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125
Query: 275 TTLLNSLCRKKKLREAYKL-LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
T LL LC K+ +A + L RM GC P++ YN ++ G C E R+ +A ++L M
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 334 SN---GCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
+ G P++VSY T++ G +G D A M+ +G P +++I C
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEEMEKLG 431
+D+A VL ++K G P T+ I+ C +G+ E +G
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 23/330 (6%)
Query: 94 SNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTF 153
N Y LI L + +++++ + + F +I + + + K F
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 154 RSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCF 213
M+ KP N ++ + A L G+ PNT +Y+ ++ +C
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLA-GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 214 NGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLS 273
+ A LF +M GV PD+ +Y I++QGL + + A +L + G + +
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 274 YTTLLNSLCRKKKLREAYKL---LCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
Y +L+ LC+ K +A ++ LC M +K + +N ++ + GR +A +
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLK---LEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
SNG +PN +YR + + QG+ + + M G + G N
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD--------SGMLNF- 726
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
++ ELL+ GE T++ ++ +
Sbjct: 727 -------IVRELLQRGEITRAGTYLSMIDE 749
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 3/258 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P++ TY LI Y + D A+K M+ KP + ++ + + A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC-KISRMEDA 565
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
LFK GV P+ +YNI+++ + A L+ ++ E G ++ +Y I++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC+ + A+ + +++ + ++ ++++L + + EA L G P+
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
Y + +G + ++ M NGC + +V L +G A Y+
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745
Query: 366 LMISKGFSPHFSVSHALI 383
++ K FS S + I
Sbjct: 746 MIDEKHFSLEASTASLFI 763
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 182/408 (44%), Gaps = 27/408 (6%)
Query: 57 SPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLIL--ILKLGRAKY---- 110
+PI P RV L+ + DP LA + F ++ + F+HS +Y I+ IL R Y
Sbjct: 107 APIWVP-RV--LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 163
Query: 111 ------FSLID-DILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKTFRSMLEFNC 161
S D D+ L S P +F L + + + + A++ F M F
Sbjct: 164 VLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223
Query: 162 KPLPKQLNRILELLVTHRNYLRPAFD----LFKSAHKHGVLPNTKSYNIMMRAFCFNGDI 217
P + N +L HR D FK G P +YNIM+ C GD+
Sbjct: 224 FPKTRSCNGLL-----HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 218 SIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTL 277
A LF +M RG++PD +Y ++ G + +++ V E+M + PD ++Y L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N C+ KL + MK G P++V Y+T+V FC+EG A K DM G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACG 397
+PN +Y +L+ C G A + M+ G + ALI G C+ ++ EA
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 398 VLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
+ ++ AG P+ ++ ++ + M++ E+LNE+ IK D
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 3/312 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY +I + + D + F M + C+P N ++ L
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-LPIG 351
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+ ++ +G+ PN SY+ ++ AFC G + A + M G++P+ +Y L+
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
C+ ++ A L +ML G + ++YT L++ LC ++++EA +L +M G P+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+ YN ++ GF + A ++L ++ G P+L+ Y T + GLC + AK M
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M G + + L+ + G E +L+E+ + T+ +++ +C +
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 426 EMEKLGEVLNEI 437
+ K + N I
Sbjct: 592 LVSKAVDYFNRI 603
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 135/286 (47%), Gaps = 4/286 (1%)
Query: 122 KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHR 179
K + V P+L +Y LI + ++ DRAL+ + KP + L +
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 180 NYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESY 239
+ A + + G+ N+ Y +M A+ +G+ + L ++M E + V ++
Sbjct: 522 K-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Query: 240 RILMQGLCRKSQVNRAVDLLEDMLNK-GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMK 298
+L+ GLC+ V++AVD + N G + +T +++ LC+ ++ A L +M
Sbjct: 581 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Query: 299 VKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFD 358
KG PD Y +++ G ++G ++A + + M G +L++Y +LV GL
Sbjct: 641 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 359 VAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK 404
A+ +++ MI +G P + +++K +G +DEA + L+K
Sbjct: 701 KARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 36/266 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
++ A +LF GV+PN SYN ++ F ++ A L N++ RG+ PD+ Y
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
+ GLC ++ A ++ +M G ++L YTTL+++ + E LL MK
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN-GCLPNLVSYRTLVGGLCDQGMFDVA 360
+V + ++ G C+ A + ++ G N + ++ GLC + A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGV---------------------- 398
+ M+ KG P + +L+ G G V EA +
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 399 -------------LEELLKAGEAPHE 411
LEE++ G P E
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDE 718
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 1/353 (0%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY I I R SL +L + Y + L+ Y S A+
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E KP ++ L H N A L + G P+ +Y ++ C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GDI +A L NKM + +V + ++ LC+ V AVDL +M KG P+ +
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y +L+N LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ E+M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKV 392
P+ ++Y L+ G C D AK+ + M+SK P+ + LI GFC +V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 393 DEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGD 445
++ + E+ + G + T+ I+ + + V ++V + D
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 8/319 (2%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P L TY ++ + D AL M K N I++ L +R ++ A D
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR-HVEVAVD 279
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LF G+ PN +YN ++ C G S A L + M E+ + P+V ++ L+
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A L E+M+ + PDT++Y L+N C +L EA ++ M K C P+I
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
YNT++ GFC+ R D ++ +M G + N V+Y T++ G G D A+ + M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC-AGEE 426
+S L+ G C+ GK+D A + + L K+ + + ++ +C AG
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG-- 517
Query: 427 MEKLGEVLNEIVKVEIKGD 445
K+GE + + IK D
Sbjct: 518 --KVGEAWDLFCSLSIKPD 534
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F M++ +P P + N++L V N L + G+ + +Y
Sbjct: 65 DDAVDLFGDMVK--SRPFPSIVEFNKLLSA-VAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
+I + FC +S+A + KM + G PD+ + L+ G C +++ AV L++ M+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G+ PDT ++TTL++ L K EA L+ +M +GC PD+V Y TVV G C+ G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M + N+V + T++ LC +VA M +KG P+ ++LI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
CN G+ +A +L +L+ P+ T+ ++ ++ + ++ E+++ I
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 445 DT 446
DT
Sbjct: 362 DT 363
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 3/321 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++ L+TY I + + AL M++ +P L+ +L H + A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC-HSKRISDA 172
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
L + G P+T ++ ++ + S A L ++M +RG PD+ +Y ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC++ ++ A++LL M + + + T+++SLC+ + + A L M+ KG P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YN+++ C GR DA ++L +M PN+V++ L+ +G A+K +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
MI + P + LI GFC ++DEA + + ++ P+ T+ ++ C +
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 426 EMEKLGEVLNEIVKVEIKGDT 446
+E E+ E+ + + G+T
Sbjct: 413 RVEDGVELFREMSQRGLVGNT 433
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 10/301 (3%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++ T+ LI + + A K M++ + P N ++ H N L A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH-NRLDEA 382
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+FK LPN ++YN ++ FC + LF +M +RG++ + +Y ++QG
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
+ + A + + M++ D ++Y+ LL+ LC KL A + ++ +
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
I YNT++ G C+ G+ +A + + P++V+Y T++ GLC + + A +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACG--VLEELLKAGEAPHEDTWVMIVPQICA 423
M G P+ + LI+ N+ D A +++E+ +G T ++ +
Sbjct: 560 KMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Query: 424 G 424
G
Sbjct: 618 G 618
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 38/274 (13%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P TY LI + N D A + F+ M+ +C P + N ++ + +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR-VEDG 417
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+LF+ + G++ NT +Y +++ F GD A +F +M V D+ +Y IL+ G
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 246 LCRKSQVNRAV-------------------DLLEDMLNKGFV-------------PDTLS 273
LC +++ A+ ++E M G V PD ++
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 274 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMP 333
Y T+++ LC K+ L+EA L +MK G P+ YNT++ R+ + +++++M
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 334 SNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
S+G + + S +LV + G D K ++ ++
Sbjct: 598 SSGFVGD-ASTISLVTNMLHDGRLD--KSFLNML 628
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 228 FERGVMPDVESYR-ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKK 286
+ER YR IL L +V+ AVDL DM+ P + + LL+++ + K
Sbjct: 39 WERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98
Query: 287 LREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRT 346
L +M+ G + D+ Y+ + FCR + A VL M G P++V+ +
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 347 LVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAG 406
L+ G C A + M+ G+ P LI G K EA +++++++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 407 EAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
P T+ +V +C +++ +LN++ IK + I
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 36/391 (9%)
Query: 93 HSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKT 152
H TY ILI R SL +L + Y + + L+ Y A+
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
M+E +P ++ L H N A L + G PN +Y +++ C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
GD +A L NKM + DV + ++ LC+ V+ A++L ++M KG P+ +
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+Y++L++ LC + +A +LL M K NP++V +N ++ F +EG+ ++A K+ +DM
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 333 PSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC----- 387
P++ +Y +LV G C D AK+ + M+SK P + LIKGFC
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 388 ------------------------------NVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ G D A V ++++ G P T+ ++
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ +C ++EK EV + + K EIK D I
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 5/335 (1%)
Query: 116 DILITL--KSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRI 171
D++I+L K + + L+TY LI + + AL M++ +P L+ +
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 172 LELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERG 231
L H + A L + G P+T ++ ++ + S A L ++M +RG
Sbjct: 162 LNGYC-HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 232 VMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
P++ +Y +++ GLC++ + A++LL M D + + T+++SLC+ + + +A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
L M+ KG P++V Y++++ C GR DA ++L DM PNLV++ L+
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
+G F A+K MI + P ++L+ GFC ++D+A + E ++ P
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
T+ ++ C + +E E+ E+ + GDT
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 5/336 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
QPN TY +++ L + L ++L +++ +F +I + D
Sbjct: 222 QPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
AL F+ M +P + ++ L ++ + A L + + PN ++N +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW-SDASQLLSDMIEKKINPNLVTFNAL 336
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+ AF G A L++ M +R + PD+ +Y L+ G C ++++A + E M++K
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACK 327
PD ++Y TL+ C+ K++ + +L M +G D V Y T++ G +G +A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 328 VLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFC 387
V + M S+G P++++Y L+ GLC+ G + A + M + +I+G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 388 NVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA 423
GKVD+ + L G P+ T+ ++ +C+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 4/339 (1%)
Query: 114 IDDILITLKS-EHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNR 170
+DD L K E + P++ TY LI A + M+E P N
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 171 ILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFER 230
+++ V ++ A L+ K + P+ +YN ++ FC + + A +F M +
Sbjct: 336 LIDAFVKEGKFVE-AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 231 GVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PDV +Y L++G C+ +V +L +M ++G V DT++YTTL+ L A
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 291 YKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGG 350
K+ +M G PDI+ Y+ ++ G C G+ A +V + M + ++ Y T++ G
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 351 LCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
+C G D + KG P+ + +I G C+ + EA +L+++ + G P+
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 411 EDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIV 449
T+ ++ + E++ E+ GD +
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H L A LF K LP+ +N ++ A + +L KM ++ +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+Y IL+ CR+SQ++ A+ LL M+ G+ P ++ ++LLN C K++ +A L+ +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD + + T++ G +A +A +++ M GC PNLV+Y +V GLC +G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
D+A + M + + + +I C VD+A + +E+ G P+ T+ +
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEI 442
+ +C+ ++L+++++ +I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKI 326
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
YR +++ +++ A+ L M+ +P + + LL+++ + KK L +M
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 298 KVKGCNPDIVH----YNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCD 353
+ +IVH YN ++ FCR + A +L M G P++V+ +L+ G C
Sbjct: 112 Q----RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 354 QGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDT 413
A + M+ G+ P LI G K EA +++ +++ G P+ T
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRI 448
+ ++V +C + + +LN++ +I+ D I
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
+DLF S GV PN +YN M+ C + AY L KM E G +P+ +Y L++
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSL 281
R + +L+ +M + FV D + + N L
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 167/319 (52%), Gaps = 2/319 (0%)
Query: 121 LKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRN 180
+K + P T + T + ++ E + + + R M+E C+P N I+ + +
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR-MVENGCQPDVVTYNSIVNGICRSGD 208
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
A DL + + V + +Y+ ++ + C +G I A +LF +M +G+ V +Y
Sbjct: 209 T-SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L++GLC+ + N LL+DM+++ VP+ +++ LL+ ++ KL+EA +L M +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G +P+I+ YNT++ G+C + R +A +L+ M N C P++V++ +L+ G C D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
K + + +G + L++GFC GK+ A + +E++ G P T+ +++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 421 ICAGEEMEKLGEVLNEIVK 439
+C ++EK E+ ++ K
Sbjct: 448 LCDNGKLEKALEIFEDLQK 466
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 3/301 (0%)
Query: 130 PSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
P + TY ++ S AL R M E N K + I++ L + A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC-RDGCIDAAIS 249
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
LFK G+ + +YN ++R C G + L M R ++P+V ++ +L+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ ++ A +L ++M+ +G P+ ++Y TL++ C + +L EA +L M C+PDIV
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+ +++ G+C R D KV ++ G + N V+Y LV G C G +A++ Q M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+S G P L+ G C+ GK+++A + E+L K+ + I+ +C G ++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 428 E 428
E
Sbjct: 490 E 490
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A+ + K G P+T ++N +++ G +S A L ++M E G PDV +Y ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
G+CR + A+DLL M + D +Y+T+++SLCR + A L M+ KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPS------------------------------ 334
+V YN++V G C+ G+ D +L+DM S
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 335 -----NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
G PN+++Y TL+ G C Q A + LM+ SP +LIKG+C V
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIV 438
+VD+ V + K G + T+ ++V C +++ E+ E+V
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
++P++ TY L+ Y N A M+ C P +++ + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR-VDDG 387
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F++ K G++ N +Y+I+++ FC +G I +A LF +M GV+PDV +Y IL+ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
LC ++ +A+++ ED+ + YTT++ +C+ K+ +A+ L C + KG P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
++ Y ++ G C++G +A +L M +G PN +Y TL+ G + K ++
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 366 LMISKGFSPHFS 377
M S GFS S
Sbjct: 568 EMKSCGFSADAS 579
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPK--QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
D A+ F+ M+ +PLP +R + + + D K +G+ N +
Sbjct: 70 DDAIALFQEMIR--SRPLPSLVDFSRFFSAIARTKQF-NLVLDFCKQLELNGIAHNIYTL 126
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
NIM+ FC AY++ K+ + G PD ++ L++GL + +V+ AV L++ M+
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD ++Y +++N +CR A LL +M+ + D+ Y+T++ CR+G
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A + ++M + G ++V+Y +LV GLC G ++ ++ M+S+ P+ + L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
F GK+ EA + +E++ G +P+ T+ ++ C + + +L+ +V+
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 180/383 (46%), Gaps = 13/383 (3%)
Query: 45 EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILK 104
E+ ++ + + I S CR + A+ S L KE+ + S TY L+
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAIS---LFKEM-----ETKGIKSSVVTYNSLVRG 272
Query: 105 LGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCK 162
L +A ++ D L+ + P++ T+ L+ ++ + A + ++ M+
Sbjct: 273 LCKAGKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 163 PLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYT 222
P N +++ N L A ++ ++ P+ ++ +++ +C +
Sbjct: 331 PNIITYNTLMDGYCMQ-NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 223 LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLC 282
+F + +RG++ + +Y IL+QG C+ ++ A +L ++M++ G +PD ++Y LL+ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 283 RKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLV 342
KL +A ++ ++ + IV Y T++ G C+ G+ DA + +P G PN++
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 343 SYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEEL 402
+Y ++ GLC +G A ++ M G +P+ + LI+ G + + ++EE+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 403 LKAGEAPHEDTWVMIVPQICAGE 425
G + + M++ + +GE
Sbjct: 570 KSCGFSADASSIKMVIDMLLSGE 592
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 195/432 (45%), Gaps = 16/432 (3%)
Query: 19 AVTFPPKTPSLIFCYSSSSQESPSSPEQQQESSISNSKSPIGSPCRVQKLIASQSDPLLA 78
+ F K + YSS + E S E SI K PI P ++ L+ S ++
Sbjct: 10 VIQFYSKPSWMQRSYSSGNAEFNISGEV---ISILAKKKPI-EPA-LEPLVPFLSKNIIT 64
Query: 79 KEIFDYASRQPNFRH-----------SNSTYLILILKLGRAKYFSLIDDILITLKSEHYP 127
I D +RQ FR S ++ ++I L L L LKS
Sbjct: 65 SVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 124
Query: 128 VTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFD 187
V F LI YA+ + ++A+++F M EF+C+P N IL +++ + AF
Sbjct: 125 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFA 184
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
++ K PN ++ I+M G S A +F+ M RG+ P+ +Y IL+ GLC
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
++ + A L +M G PD++++ LL+ C+ ++ EA++LL + G +
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
Y++++ G R R A ++ +M P+++ Y L+ GL G + A K + M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
SKG SP +A+IK C G ++E + E+ + P T +++ +C +
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 428 EKLGEVLNEIVK 439
+ E+ EI K
Sbjct: 425 REAEEIFTEIEK 436
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 13/256 (5%)
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
+A + + +ML+ N KP L IL ++ + A L S G+ P+T YN +
Sbjct: 321 QAFELYANMLKKNIKP-DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
++A C G + +L +M E PD ++ IL+ +CR V A ++ ++ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRMKV--------KGCNPDIVHYNTVVLGFCRE 319
P ++ L++ LC+ +L+EA LL +M+V + + ++T+V
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV----ES 495
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVS 379
G + A + L G P++VSY L+ G C G D A K + ++ KG SP
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 380 HALIKGFCNVGKVDEA 395
+ LI G VG+ +EA
Sbjct: 556 NTLINGLHRVGREEEA 571
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNR- 254
GV ++ + +++ A+ G A F +M E PDV +Y ++++ + R+
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 255 AVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVL 314
A + +ML P+ ++ L++ L +K + +A K+ M +G +P+ V Y ++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ G A DA K+ +M ++G P+ V++ L+ G C G A + ++L GF
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
+LI G + +A + +LK P + +++ + ++E ++L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 435 NEIVKVEIKGDTRIVEAGI 453
+ + I DT A I
Sbjct: 362 SSMPSKGISPDTYCYNAVI 380
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 149 ALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMM 208
++ TF ++++ CK + R LL+ RPA + +H +S++ M+
Sbjct: 442 SVATFNALIDGLCKSGELKEAR---LLLHKMEVGRPASLFLRLSH-----SGNRSFDTMV 493
Query: 209 RAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV 268
+ G I AY + G PD+ SY +L+ G CR ++ A+ LL + KG
Sbjct: 494 ES----GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLS 549
Query: 269 PDTLSYTTLLNSLCRKKKLREAYKLL 294
PD+++Y TL+N L R + EA+KL
Sbjct: 550 PDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 116/308 (37%), Gaps = 61/308 (19%)
Query: 169 NRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF 228
NR + +V + L+ DL A G P+ SYN+++ FC GDI A L N +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADT-GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 229 ERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLR 288
+G+ PD +Y L+ GL R + A L F Y +L+ CRK+K+
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVL 602
Query: 289 EAYKLLCR-MKVKGCNPD---------------------------------IVHYNTVVL 314
A+ L + +K C D + Y ++
Sbjct: 603 VAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLI 662
Query: 315 GFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSP 374
G C+ GR +A V + L S L+ GLC + D A + + F
Sbjct: 663 GLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFK- 721
Query: 375 HFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVL 434
L+ CN +L LL++ E + IV Q+ ME+ G +
Sbjct: 722 -------LMPRVCNY--------LLSSLLESTEK------MEIVSQLT--NRMERAGYNV 758
Query: 435 NEIVKVEI 442
+ +++ EI
Sbjct: 759 DSMLRFEI 766
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 8/315 (2%)
Query: 133 FTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT--HRNYLRPAFDLFK 190
FT LI + N + A+ M+E KP I++ L H NY A LF
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY---ALSLFD 201
Query: 191 SAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKS 250
+G+ P+ Y ++ C +G A +L M +R + PDV ++ L+ ++
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
+ A +L +M+ P+ +YT+L+N C + + EA ++ M+ KGC PD+V Y
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
+++ GFC+ + DA K+ +M G N ++Y TL+ G G +VA++ M+S+
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLK---AGEAPHEDTWVMIVPQICAGEEM 427
G P+ + L+ C GKV +A + E++ K G AP+ T+ +++ +C ++
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 428 EKLGEVLNEIVKVEI 442
EK V ++ K E+
Sbjct: 442 EKALMVFEDMRKREM 456
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
YL +F K G P+ ++ ++ FC + A ++ N+M E G+ PDV Y
Sbjct: 124 YLASSF--LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
++ LC+ VN A+ L + M N G PD + YT+L+N LC + R+A LL M +
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
PD++ +N ++ F +EG+ +DA ++ +M PN+ +Y +L+ G C +G D A
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
++ LM +KG P +LI GFC KVD+A + E+ + G + T+ ++
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 5/302 (1%)
Query: 147 DRALKTFRSMLEFNCKPLPKQLN--RILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSY 204
+ AL F M+E +PLP ++ ++L ++ + + +L GV + +
Sbjct: 54 NEALDLFTHMVE--SRPLPSIIDFTKLLNVIAKMKKF-DVVINLCDHLQIMGVSHDLYTC 110
Query: 205 NIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLN 264
N++M FC + +A + KM + G PD+ ++ L+ G C +++ A+ ++ M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 265 KGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAID 324
G PD + YTT+++SLC+ + A L +M+ G PD+V Y ++V G C GR D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 325 ACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIK 384
A +L M P+++++ L+ +G F A++ MI +P+ +LI
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 385 GFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKG 444
GFC G VDEA + + G P + ++ C ++++ ++ E+ + + G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 445 DT 446
+T
Sbjct: 351 NT 352
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 13/329 (3%)
Query: 96 STYLILILKLGRAKY-FSLIDDILITLKSEHYPVTPS--LFTYLIKIYAESNLPDRALKT 152
+T + + K G Y SL D + E+Y + P ++T L+ S A
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQM------ENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 153 FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFC 212
R M + KP N +++ V +L A +L+ + + PN +Y ++ FC
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFL-DAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 213 FNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTL 272
G + A +F M +G PDV +Y L+ G C+ +V+ A+ + +M KG +T+
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 273 SYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDM 332
+YTTL+ + K A ++ M +G P+I YN ++ C G+ A + EDM
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 333 PS---NGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNV 389
+G PN+ +Y L+ GLC G + A + M + +I+G C
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 390 GKVDEACGVLEELLKAGEAPHEDTWVMIV 418
GKV A + L G P+ T+ ++
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%)
Query: 178 HRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVE 237
H A DLF + LP+ + ++ + L + + GV D+
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+ +LM C+ SQ A L M+ GF PD +++T+L+N C ++ EA ++ +M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
G PD+V Y T++ C+ G A + + M + G P++V Y +LV GLC+ G +
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
A ++ M + P +ALI F GK +A + E+++ AP+ T+ +
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 418 VPQIC 422
+ C
Sbjct: 289 INGFC 293
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
+ P++FTY LI + D A + F M C P ++ + + A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK-VDDA 336
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
+F + G+ NT +Y +++ F G ++A +F+ M RGV P++ +Y +L+
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 246 LCRKSQVNRAVDLLEDMLNK---GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGC 302
LC +V +A+ + EDM + G P+ +Y LL+ LC KL +A + M+ +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 303 NPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKK 362
+ I+ Y ++ G C+ G+ +A + +PS G PN+V+Y T++ GL +G+ A
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 363 YMQLMISKGFS 373
+ M G S
Sbjct: 517 LFRKMKEDGVS 527
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 108/245 (44%), Gaps = 10/245 (4%)
Query: 208 MRAFCF------NGDISIAYT----LFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVD 257
+RAFC NG S+ + LF M E +P + + L+ + + + + ++
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 258 LLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFC 317
L + + G D + L+N C+ + A L +M G PDIV + +++ GFC
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 318 REGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFS 377
R +A ++ M G P++V Y T++ LC G + A M + G P
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEI 437
+ +L+ G CN G+ +A +L + K P T+ ++ + E+ NE+
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 438 VKVEI 442
+++ I
Sbjct: 274 IRMSI 278
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%)
Query: 238 SYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
+YR +++ Q N A+DL M+ +P + +T LLN + + KK L +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 298 KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMF 357
++ G + D+ N ++ FC+ + A L M G P++V++ +L+ G C
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 358 DVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMI 417
+ A + M+ G P + +I C G V+ A + +++ G P + +
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 418 VPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGI 453
V +C +L + K +IK D A I
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
>sp|Q8LE47|PPR87_ARATH Pentatricopeptide repeat-containing protein At1g61870,
mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2
SV=2
Length = 408
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 183/369 (49%), Gaps = 21/369 (5%)
Query: 42 SSPEQQQESSIS-----NSKSPIGSPCRVQ---KLIASQSDPLLAKEIFDYASRQPNFRH 93
+SP+ + SS S +SK+P+ S + + L+ S+ DP EI AS P+ R
Sbjct: 19 ASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI 78
Query: 94 SNSTYLILILKLGRAKYFSLIDDILI-------TLKSEHYPVTPSLFTYLIKIYAESNLP 146
+ + L K+FS + ++L LKSE + + I +YA++N+
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFA------AHAIVLYAQANML 132
Query: 147 DRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNI 206
D +L+ FR + +F K LN +L + ++Y + +G+ P+ ++YN
Sbjct: 133 DHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 207 MMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKG 266
M++ FC +G S +Y++ +M +G+ P+ S+ +++ G + + + +L M ++G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 267 FVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDAC 326
+Y + SLC++KK +EA LL M G P+ V Y+ ++ GFC E +A
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 327 KVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
K+ + M + GC P+ Y TL+ LC G F+ A + + K + P FS+ +L+ G
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Query: 387 CNVGKVDEA 395
KV+EA
Sbjct: 373 AKDSKVEEA 381
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 234 PDVESYRILMQGLCRKSQVN---RAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREA 290
PD++S R + +Q N ++ + D+ S LL + K +EA
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 291 YKLLCRM-KVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVG 349
++ M K+ G PD+ YN ++ FC G A + ++ +M G PN S+ ++
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 350 GLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
G + D K + +M +G + S + I+ C K EA +L+ +L AG P
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 410 HEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ T+ ++ C ++ E+ ++ +V K D+
Sbjct: 291 NTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G+ PNT +Y+ ++ FC D A LF M RG PD E Y L+ LC+ A
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
+ L ++ + K +VP +L+N L + K+ EA +L+ ++K K
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A LFK G P+++ Y ++ C GD A +L + E+ +P + L+
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 245 GLCRKSQVNRAVDLL 259
GL + S+V A +L+
Sbjct: 371 GLAKDSKVEEAKELI 385
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 128/255 (50%)
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L T L A F S + G++P+ Y I+++ +C G IS+A L N+M ++G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 235 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 294
DV +Y ++ GLC++ + A L +M + PD+ + T L++ C+ L+ A +L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 295 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 354
+MK K D+V YNT++ GF + G A ++ DM S LP +SY LV LC +
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 355 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 414
G A + MISK P + +++IKG+C G + LE+++ G P ++
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 415 VMIVPQICAGEEMEK 429
++ E M K
Sbjct: 624 NTLIYGFVREENMSK 638
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 33/419 (7%)
Query: 46 QQQESSISNSKSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQ-PNFRHSNSTYLILILK 104
+Q +++ N + V+ L ++D L + D PNF+H++ + +I
Sbjct: 63 KQGNNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHI 122
Query: 105 LGRAKYFSLID---------------DILITLKS--EHYPVTPSLFTYLIKIYAESNLPD 147
L R+ S +I+ +L S + S+F LI+ Y ++
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 182
Query: 148 RALKTFRSMLEFN-------CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPN 200
A + F + C L L RI ++ A+ +++ + GV N
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRI--------GWVELAWGVYQEISRSGVGIN 234
Query: 201 TKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLE 260
+ NIM+ A C +G + T +++ E+GV PD+ +Y L+ K + A +L+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 261 DMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREG 320
M KGF P +Y T++N LC+ K A ++ M G +PD Y ++++ C++G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 321 RAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
++ KV DM S +P+LV + +++ G D A Y + G P +
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 381 ALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
LI+G+C G + A + E+L+ G A T+ I+ +C + + + ++ NE+ +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 38/317 (11%)
Query: 132 LFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKS 191
++T LI+ Y + A+ ML+ C N IL L R L A LF
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC-KRKMLGEADKLFNE 470
Query: 192 AHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQ 251
+ + P++ + I++ C G++ A LF KM E+ + DV +Y L+ G +
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 252 VNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNT 311
++ A ++ DM++K +P +SY+ L+N+LC K L EA+++ M K P ++ N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 312 VVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLV----------------------- 348
++ G+CR G A D LE M S G +P+ +SY TL+
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 349 --------------GGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDE 394
G C Q A+ ++ MI +G +P S +I GF + + E
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 395 ACGVLEELLKAGEAPHE 411
A + +E+L+ G +P +
Sbjct: 711 AFRIHDEMLQRGFSPDD 727
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 3/318 (0%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P + TY LI Y+ L + A + +M P N ++ L H Y R A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER-A 324
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
++F + G+ P++ +Y ++ C GD+ +F+ M R V+PD+ + +M
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 305
R +++A+ + G +PD + YT L+ CRK + A L M +GC D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 306 IVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQ 365
+V YNT++ G C+ +A K+ +M P+ + L+ G C G A + Q
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 366 LMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGE 425
M K + L+ GF VG +D A + +++ P ++ ++V +C+
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 426 EMEKLGEVLNEIVKVEIK 443
+ + V +E++ IK
Sbjct: 565 HLAEAFRVWDEMISKNIK 582
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 179/404 (44%), Gaps = 49/404 (12%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSL--FTY 135
AKE+F R ++TY L+++ + + + ++S V P L F+
Sbjct: 324 AKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR--DVVPDLVCFSS 380
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVT---HRNYLRPAFDLFKSA 192
++ ++ S D+AL F S+ E P N I +L+ + + A +L
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPD----NVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 193 HKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQV 252
+ G + +YN ++ C + A LFN+M ER + PD + IL+ G C+ +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 253 NRAVDLLE-----------------------------------DMLNKGFVPDTLSYTTL 277
A++L + DM++K +P +SY+ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 278 LNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGC 337
+N+LC K L EA+++ M K P ++ N+++ G+CR G A D LE M S G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 338 LPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK--GFSPHFSVSHALIKGFCNVGKVDEA 395
+P+ +SY TL+ G + A ++ M + G P ++++ GFC ++ EA
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 396 CGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVK 439
VL ++++ G P T+ ++ + + + + + +E+++
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%)
Query: 188 LFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLC 247
+ GV P+ +YN ++ A+ G + A+ L N M +G P V +Y ++ GLC
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 248 RKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIV 307
+ + RA ++ +ML G PD+ +Y +LL C+K + E K+ M+ + PD+V
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 308 HYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLM 367
+++++ F R G A + G +P+ V Y L+ G C +GM VA M
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 368 ISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEM 427
+ +G + + ++ G C + EA + E+ + P T +++ C +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 428 EKLGEVLNEIVKVEIKGDT 446
+ E+ ++ + I+ D
Sbjct: 497 QNAMELFQKMKEKRIRLDV 515
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 78 AKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY-- 135
A ++F+ + + F S Y + IL G K +L + + + K + + + TY
Sbjct: 464 ADKLFNEMTERALFPDS---YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 136 LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKH 195
L+ + + D A + + M+ P P + ++ L + + +L AF ++
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS-KGHLAEAFRVWDEMISK 579
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
+ P N M++ +C +G+ S + KM G +PD SY L+ G R+ +++A
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 256 VDLLEDMLNK--GFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVV 313
L++ M + G VPD +Y ++L+ CR+ +++EA +L +M +G NPD Y ++
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 314 LGFCREGRAIDACKVLEDMPSNGCLPN 340
GF + +A ++ ++M G P+
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protein At3g60050
OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1
Length = 473
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 156/334 (46%), Gaps = 1/334 (0%)
Query: 77 LAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYL 136
LA F ++ Q FRH+ ++Y +L+ + + ++ + + +P T F L
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL 190
Query: 137 IKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHG 196
I E+ L +A+ F FN +P N IL L+ + Y + ++K + G
Sbjct: 191 ICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEW-VYKQMLEDG 249
Query: 197 VLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAV 256
P+ +YNI++ G + LF++M G PD +Y IL+ L + ++ A+
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 257 DLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGF 316
L M G P L YTTL++ L R L L M GC PD+V Y ++ G+
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 317 CREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHF 376
G A ++ +M G LPN+ +Y +++ GLC G F A ++ M S+G +P+F
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 377 SVSHALIKGFCNVGKVDEACGVLEELLKAGEAPH 410
V L+ GK+ EA V+ E++K G H
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVH 463
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 1/316 (0%)
Query: 130 PSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLF 189
PS++ LI++Y + +L+ FR M + P N IL +V + +
Sbjct: 123 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFL 181
Query: 190 KSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRK 249
K K + P+ ++NI++ C G + L KM + G P + +Y ++ C+K
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 250 SQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHY 309
+ A++LL+ M +KG D +Y L++ LCR ++ + Y LL M+ + +P+ V Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 310 NTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMIS 369
NT++ GF EG+ + A ++L +M S G PN V++ L+ G +G F A K +M +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 370 KGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEK 429
KG +P L+ G C + D A G + + G T+ ++ +C +++
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 430 LGEVLNEIVKVEIKGD 445
+LNE+ K I D
Sbjct: 422 AVVLLNEMSKDGIDPD 437
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 13/356 (3%)
Query: 97 TYLILILKLGR----AKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRAL 150
TY +LI L R AK + L+ D+ + P+ TY LI ++ A
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDM------RKRMIHPNEVTYNTLINGFSNEGKVLIAS 318
Query: 151 KTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRA 210
+ ML F P N +++ ++ N+ + A +F G+ P+ SY +++
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNF-KEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 211 FCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPD 270
C N + +A + +M GV +Y ++ GLC+ ++ AV LL +M G PD
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 271 TLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLE 330
++Y+ L+N C+ + + A +++CR+ G +P+ + Y+T++ CR G +A ++ E
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 331 DMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVG 390
M G + ++ LV LC G A+++M+ M S G P+ LI G+ N G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 391 KVDEACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDT 446
+ +A V +E+ K G P T+ ++ +C G + + + L + V DT
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 613
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 6/358 (1%)
Query: 97 TYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSM 156
T+ +L+ L +A + ++ + + S+ F LI Y S +A F M
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 157 LEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGD 216
+ P +L+ L +LR A KS H +T YN ++ A C +G+
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKG-GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 217 ISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFV-PDTLSYT 275
++ A +LF +M +R ++PD +Y L+ GLCRK + A+ ++ +G V P+ + YT
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 276 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSN 335
++ + + + + +M G PDIV N ++ G+ R G+ +L +M +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 336 GCLPNLVSYRTLVGGLCDQGMFDVAKKYM--QLMISKGFSPHFSVSHALIKGFCNVGKVD 393
PNL +Y L+ G + DV+ ++ + +I G P H+L+ G C ++
Sbjct: 749 NGGPNLTTYNILLHGYSKRK--DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 394 EACGVLEELLKAGEAPHEDTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEA 451
+L+ + G T+ M++ + CA E+ +++ + + I D +A
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 114/242 (47%)
Query: 181 YLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYR 240
+L A L K G+ P+ +Y+ ++ FC G A + +++ G+ P+ Y
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 241 ILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVK 300
L+ CR + A+ + E M+ +G D ++ L+ SLC+ K+ EA + + M
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 301 GCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVA 360
G P+ V ++ ++ G+ G + A V ++M G P +Y +L+ GLC G A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 361 KKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQ 420
+K+++ + + + + + L+ C G + +A + E+++ P T+ ++
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 421 IC 422
+C
Sbjct: 658 LC 659
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 5/234 (2%)
Query: 200 NTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLL 259
N Y+I++R + G I + +F M G P V + ++ + + + L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 260 EDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCRE 319
++ML + PD ++ L+N LC + ++ L+ +M+ G P IV YNTV+ +C++
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 320 GRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQL--MISKGFSPHFS 377
GR A ++L+ M S G ++ +Y L+ LC +AK Y+ L M + P+
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN--RIAKGYLLLRDMRKRMIHPNEV 299
Query: 378 VSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW-VMIVPQICAGEEMEKL 430
+ LI GF N GKV A +L E+L G +P+ T+ +I I G E L
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 182 LRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRI 241
L+ A ++++ G + ++N+++ + C G ++ A M G++P+ S+
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 242 LMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKG 301
L+ G + +A + ++M G P +Y +LL LC+ LREA K L +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ------- 354
D V YNT++ C+ G A + +M LP+ +Y +L+ GLC +
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 355 ------------------------GMFDVAKK-----YMQLMISKGFSPHFSVSHALIKG 385
GMF + + + M + G +P ++A+I G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 386 FCNVGKVDEACGVLEELLKAGEAPHEDTWVMIV 418
+ +GK+++ +L E+ P+ T+ +++
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 161 CKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA 220
C + LNR HR + + + K G+ P ++ Y ++ C GDI A
Sbjct: 862 CDAMVSVLNR------NHR--FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 221 YTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNS 280
+ + +M + P + +++ L + + + A LL ML VP S+TTL++
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 281 LCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPN 340
C+ + EA +L M G D+V YN ++ G C +G A ++ E+M +G L N
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 341 LVSYRTLVGG-LCDQGMFDVAKKYMQLMISKGFSPHFSVSH 380
+Y+ L+ G L + F A ++ ++++GF S+S
Sbjct: 1034 ATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 199 PNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDL 258
PN +YNI++ + D+S ++ L+ + G++PD + L+ G+C + + + +
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 259 LEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCR 318
L+ + +G D ++ L++ C ++ A+ L+ M G + D + +V R
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 319 EGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSV 378
R ++ VL +M G P Y L+ GLC G A + MI+ P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 379 SHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQICA-GEEMEKL 430
A+++ GK DEA +L +LK P ++ ++ C G +E L
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 130 PSLFTYLIKIYAESNLPD--RALKTFRSMLEFNCKPLPKQLN-RILELLVTHRNYLRPAF 186
P+L TY I ++ S D + +RS++ N LP +L L L + N L
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSII-LN-GILPDKLTCHSLVLGICESNMLEIGL 809
Query: 187 DLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTL----------------------- 223
+ K+ GV + ++N+++ C NG+I+ A+ L
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 224 ------------FNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDT 271
++M ++G+ P+ Y L+ GLCR + A + E+M+ P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 272 LSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLED 331
++ + ++ +L + K EA LL M P I + T++ C+ G I+A ++
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989
Query: 332 MPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGF 386
M + G +LVSY L+ GLC +G +A + + M GF + + ALI+G
Sbjct: 990 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 45/352 (12%)
Query: 109 KYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPK 166
K FS+ D++ K H+P + FTY L+K + A K +S+
Sbjct: 561 KAFSVFDEMT---KVGHHP---TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 167 QLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIA------ 220
N +L + N L A LF + +LP++ +Y ++ C G IA
Sbjct: 615 MYNTLLTAMCKSGN-LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Query: 221 -------------YTLF-NKMFERGVM----------------PDVESYRILMQGLCRKS 250
YT F + MF+ G PD+ + ++ G R
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Query: 251 QVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYN 310
++ + DLL +M N+ P+ +Y LL+ ++K + ++ L + + G PD + +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 311 TVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISK 370
++VLG C K+L+ G + ++ L+ C G + A +++M S
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 371 GFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
G S A++ + E+ VL E+ K G +P ++ ++ +C
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 65/145 (44%)
Query: 302 CNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAK 361
CN + Y+ ++ + REG D+ ++ M G P++ + ++G + G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 362 KYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
+++ M+ + P + + LI C G +++ +++++ K+G AP T+ ++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 422 CAGEEMEKLGEVLNEIVKVEIKGDT 446
C + E+L+ + + D
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADV 263
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 153/299 (51%), Gaps = 5/299 (1%)
Query: 128 VTPSLFTYLIKIYA--ESNLPDRALKTFRSMLEFNCKPLPKQLNRILE--LLVTHRNYLR 183
+ P++FT+ + I A ++ ++A M + C P N +++ + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 184 PAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILM 243
A + K ++ V PN ++NI++ F + ++ + +F +M ++ V P+V SY L+
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 244 QGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCN 303
GLC +++ A+ + + M++ G P+ ++Y L+N C+ L+EA + +K +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 304 PDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY 363
P YN ++ +C+ G+ D + E+M G +P++ +Y L+ GLC G + AKK
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQIC 422
+ SKG P H L++G+C G+ +A +L+E+ K G P T+ +++ C
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%), Gaps = 7/298 (2%)
Query: 128 VTPSLFTYLIKI---YAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRP 184
V+P+L T+ I I + + NLP ++K F+ ML+ + KP N ++ L + +
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPG-SMKVFKEMLDQDVKPNVISYNSLINGLC-NGGKISE 349
Query: 185 AFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQ 244
A + GV PN +YN ++ FC N + A +F + +G +P Y +L+
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 245 GLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 304
C+ +++ L E+M +G VPD +Y L+ LCR + A KL ++ KG P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKY- 363
D+V ++ ++ G+CR+G + A +L++M G P ++Y ++ G C +G A
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 364 MQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTWVMIVPQI 421
Q+ + + + + L++G+ GK+++A +L E+L+ G P+ T+ ++ ++
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 154/322 (47%), Gaps = 13/322 (4%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTY--LIKIYAESNL 145
QPN T+ ++I L + + D++ +K Y +P++ +Y LI Y +
Sbjct: 220 QPNV----FTFNVVINALCKTGKMNKARDVMEDMKV--YGCSPNVVSYNTLIDGYCKLGG 273
Query: 146 PDRALKT---FRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTK 202
+ K + M+E + P N +++ N L + +FK V PN
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN-LPGSMKVFKEMLDQDVKPNVI 332
Query: 203 SYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDM 262
SYN ++ C G IS A ++ +KM GV P++ +Y L+ G C+ + A+D+ +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 263 LNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLGFCREGRA 322
+G VP T Y L+++ C+ K+ + + L M+ +G PD+ YN ++ G CR G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN- 451
Query: 323 IDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPHFSVSHAL 382
I+A K L D ++ LP+LV++ L+ G C +G A ++ M G P + +
Sbjct: 452 IEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 383 IKGFCNVGKVDEACGVLEELLK 404
+KG+C G + A + ++ K
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEK 533
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 200/467 (42%), Gaps = 50/467 (10%)
Query: 31 FCYSSSS-QESPSSP-----------EQQQESSISNSKSPIGSPCRVQKLIASQSDPLLA 78
C SSS+ SP P E+Q S + + I ++LI+S+ DP L
Sbjct: 25 LCSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLC 84
Query: 79 KEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLIDDIL---ITLKSEHYP-------- 127
+ + + + S L+ L AK +S I L + S+H
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144
Query: 128 ------VTPSLFTYLIKIYAESNLPDRALKTFR-------SMLEFNCKPLPKQLNRILEL 174
V + L+ YA ++ + + F+ + +CKPL ++ L
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL------MIAL 198
Query: 175 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 234
L +R+ ++K + + PN ++N+++ A C G ++ A + M G P
Sbjct: 199 LKENRS--ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 235 DVESYRILMQGLCR---KSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAY 291
+V SY L+ G C+ ++ +A +L++M+ P+ ++ L++ + L +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 292 KLLCRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGL 351
K+ M + P+++ YN+++ G C G+ +A + + M S G PNL++Y L+ G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 352 CDQGMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHE 411
C M A + +G P + + LI +C +GK+D+ + EE+ + G P
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 412 DTWVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDY 458
T+ ++ +C +E ++ +++ KG +V I +E Y
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTS---KGLPDLVTFHILMEGY 480
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 122/231 (52%), Gaps = 5/231 (2%)
Query: 128 VTPSLFTY--LIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPA 185
V P+L TY LI + ++++ AL F S+ P + N +++ +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC-KLGKIDDG 420
Query: 186 FDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQG 245
F L + + G++P+ +YN ++ C NG+I A LF+++ +G +PD+ ++ ILM+G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEG 479
Query: 246 LCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRM-KVKGCNP 304
CRK + +A LL++M G P L+Y ++ C++ L+ A + +M K +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 305 DIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQG 355
++ YN ++ G+ ++G+ DA +L +M G +PN ++Y + + DQG
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 20/108 (18%)
Query: 183 RPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMF-ERGVMPDVESYRI 241
R A L K K G+ P +YNI+M+ +C G++ A + +M ER + +V SY +
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 242 LMQGLCRKSQVNRAVDLL-------------------EDMLNKGFVPD 270
L+QG +K ++ A LL E+M+++GFVPD
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 173/394 (43%), Gaps = 39/394 (9%)
Query: 51 SISNSKSPIGSPCRVQKLIASQSDP-LLAKEIFDYASRQPNFRHSNSTYLILILKLGRAK 109
++ N S SP +++++ S+ +LA +F +A Q F+H+ S Y LI LG+ K
Sbjct: 83 TLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIK 142
Query: 110 YFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLN 169
F LI ++ +K++ ++ F + + YA + A+ F M EF K N
Sbjct: 143 QFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN 201
Query: 170 RILELLVTHRNY--LRPAFDLFKSAH--------------------------------KH 195
R+L+ L RN + FD K
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 196 GVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRA 255
G P+ +Y I++ A C A FN+M +R P + L+ GL + ++N A
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 256 VDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVVLG 315
++ E + GF + +Y L+ + C +++ +AYK + M++KG P+ Y+ ++
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 316 FCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQGMFDVAKKYMQLMISKGFSPH 375
R R+ +A +V + M C P + +Y +V C++ D+A K M KG P
Sbjct: 382 LIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 376 FSVSHALIKGFCNVGKVDEACGVLEELLKAGEAP 409
+ +LI C+ K+DEAC E+L G P
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 88 QPNFRHSNSTYLILILKLGRAKYFSLIDDILITLKSEHYPVTPSLFTYLIKIYAESNLPD 147
Q N + S + LI LG K + + KS +P+ + L+ Y S +
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 354
Query: 148 RALKTFRSMLEFNCKPLPKQLNRILELLVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIM 207
A KT M P + + IL L+ + + A++++++ P +Y IM
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS-KEAYEVYQTM---SCEPTVSTYEIM 410
Query: 208 MRAFCFNGDISIAYTLFNKMFERGVMPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGF 267
+R FC + +A ++++M +GV+P + + L+ LC +++++ A + +ML+ G
Sbjct: 411 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Query: 268 VPDTLSYTTLLNSLCRKKKLREAYKLLCRM 297
P ++ L +L + + + L+ +M
Sbjct: 471 RPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,269,667
Number of Sequences: 539616
Number of extensions: 7231226
Number of successful extensions: 26195
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 20074
Number of HSP's gapped (non-prelim): 2813
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)