Query 012130
Match_columns 470
No_of_seqs 403 out of 1932
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:21:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 1.2E-59 4.2E-64 491.9 27.2 301 161-464 14-324 (427)
2 2vba_A 3-oxoacyl-[acyl-carrier 100.0 5E-60 1.7E-64 491.8 22.5 296 164-464 1-304 (406)
3 4ewg_A Beta-ketoacyl synthase; 100.0 2.6E-59 8.9E-64 487.3 27.4 298 163-464 4-311 (412)
4 1e5m_A KAS II, beta ketoacyl a 100.0 4.4E-59 1.5E-63 486.1 28.6 300 162-464 4-313 (416)
5 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 7.3E-58 2.5E-62 479.8 30.5 297 164-464 27-333 (437)
6 3mqd_A Beta-ketoacyl synthase; 100.0 1.5E-58 5.1E-63 483.8 24.3 299 161-464 19-323 (428)
7 1tqy_A Beta-ketoacyl synthase/ 100.0 1.5E-58 5E-63 483.3 23.6 296 165-464 3-315 (424)
8 3o04_A LMO2201 protein, beta-k 100.0 1.2E-57 4E-62 475.0 28.8 299 162-464 1-309 (413)
9 1tqy_B Actinorhodin polyketide 100.0 6.1E-58 2.1E-62 477.4 26.6 296 163-464 7-311 (415)
10 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 6.8E-58 2.3E-62 476.0 25.9 297 164-464 1-307 (408)
11 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 1.7E-57 6E-62 475.7 29.1 298 162-462 7-323 (428)
12 1ox0_A Beta ketoacyl-acyl carr 100.0 3.2E-57 1.1E-61 474.0 29.4 300 161-464 19-328 (430)
13 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 1.3E-57 4.3E-62 478.1 26.1 297 164-464 20-333 (438)
14 2vz8_A Fatty acid synthase; tr 100.0 9.4E-58 3.2E-62 557.6 24.7 283 164-464 1-299 (2512)
15 2wge_A 3-oxoacyl-[acyl-carrier 100.0 1.4E-56 4.8E-61 467.3 26.8 297 162-464 9-317 (416)
16 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 2.8E-56 9.6E-61 467.2 27.9 297 162-464 25-334 (434)
17 3hhd_A Fatty acid synthase; tr 100.0 4E-56 1.4E-60 504.5 25.4 283 164-464 3-301 (965)
18 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 9.6E-56 3.3E-60 462.9 23.7 294 165-464 1-326 (431)
19 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 1.9E-55 6.6E-60 463.1 24.2 298 164-464 23-340 (451)
20 2qo3_A Eryaii erythromycin pol 100.0 4.1E-55 1.4E-59 494.3 21.8 286 164-464 5-318 (915)
21 2hg4_A DEBS, 6-deoxyerythronol 100.0 8.8E-55 3E-59 491.7 24.1 286 164-464 38-340 (917)
22 2uv9_A Fatty acid synthase alp 100.0 1E-48 3.5E-53 456.6 9.2 319 92-438 1067-1396(1878)
23 2uv8_A Fatty acid synthase sub 100.0 3E-48 1E-52 453.5 8.9 319 91-438 1091-1421(1887)
24 2pff_A Fatty acid synthase sub 100.0 7.3E-49 2.5E-53 445.2 -0.6 319 92-438 893-1222(1688)
25 3zen_D Fatty acid synthase; tr 100.0 3.3E-43 1.1E-47 428.6 17.5 256 207-464 2617-2898(3089)
26 1wdk_C 3-ketoacyl-COA thiolase 99.9 3.2E-25 1.1E-29 228.8 13.3 195 235-463 30-316 (390)
27 1wl4_A Acetyl-coenzyme A acety 99.9 5.3E-24 1.8E-28 220.2 16.7 191 236-463 31-326 (397)
28 1afw_A 3-ketoacetyl-COA thiola 99.9 1.3E-23 4.4E-28 217.1 16.1 192 236-463 36-324 (393)
29 3goa_A 3-ketoacyl-COA thiolase 99.9 2E-22 6.8E-27 207.7 20.7 196 234-463 26-313 (387)
30 2iik_A 3-ketoacyl-COA thiolase 99.9 1.3E-22 4.3E-27 211.2 18.8 191 235-462 55-343 (418)
31 2vu1_A Acetyl-COA acetyltransf 99.9 6.1E-23 2.1E-27 211.9 14.1 191 235-463 27-321 (392)
32 2ib8_A Acetyl-COA acetyltransf 99.9 2.7E-22 9.4E-27 207.2 18.0 190 235-462 32-325 (395)
33 1ulq_A Putative acetyl-COA ace 99.9 2.4E-22 8E-27 208.1 16.2 192 236-463 27-327 (401)
34 2wu9_A 3-ketoacyl-COA thiolase 99.9 4.6E-22 1.6E-26 208.1 18.1 193 236-464 56-347 (442)
35 1hnj_A Beta-ketoacyl-acyl carr 99.9 1.5E-22 5E-27 202.7 10.3 217 166-464 2-250 (317)
36 4dd5_A Acetyl-COA acetyltransf 99.9 3.7E-21 1.3E-25 198.8 20.7 192 235-463 31-326 (396)
37 1mzj_A Beta-ketoacylsynthase I 99.9 1.7E-22 5.9E-27 204.3 9.1 221 162-464 7-263 (339)
38 1ub7_A 3-oxoacyl-[acyl-carrier 99.9 4.3E-22 1.5E-26 199.7 11.1 217 167-464 2-252 (322)
39 2ebd_A 3-oxoacyl-[acyl-carrier 99.9 1.3E-21 4.6E-26 194.7 11.6 214 166-464 2-242 (309)
40 3ss6_A Acetyl-COA acetyltransf 99.8 1E-20 3.5E-25 195.3 17.5 191 235-462 29-322 (394)
41 4e1l_A Acetoacetyl-COA thiolas 99.8 1.4E-19 4.8E-24 186.9 19.6 193 235-462 29-324 (395)
42 1u6e_A 3-oxoacyl-[acyl-carrier 99.8 8.1E-21 2.8E-25 191.3 7.6 179 162-423 8-190 (335)
43 1zow_A 3-oxoacyl-[acyl-carrier 99.8 1E-20 3.5E-25 188.7 8.1 218 166-464 2-244 (313)
44 1u0m_A Putative polyketide syn 99.8 1.7E-20 5.8E-25 192.9 9.6 235 167-464 10-284 (382)
45 2h84_A Steely1; thiolase-fold, 99.8 2.3E-20 7.7E-25 191.2 9.7 206 165-427 12-235 (374)
46 2x3e_A 3-oxoacyl-[acyl-carrier 99.8 4.9E-20 1.7E-24 185.7 11.6 214 166-464 5-256 (331)
47 3svk_A Acetyl-COA acetyltransf 99.8 2.2E-19 7.6E-24 186.1 14.7 196 235-464 32-337 (407)
48 3tsy_A Fusion protein 4-coumar 99.8 2.3E-20 7.8E-25 213.2 7.5 247 162-464 599-896 (979)
49 3s21_A 3-oxoacyl-[ACP] synthas 99.7 2.2E-17 7.6E-22 167.3 10.5 205 162-430 8-220 (345)
50 1ted_A PKS18; thiolase fold, s 99.7 1.1E-16 3.9E-21 164.9 14.3 141 234-431 112-261 (393)
51 4dfe_A 3-oxoacyl-[acyl-carrier 99.6 7E-16 2.4E-20 155.5 13.6 171 166-408 11-185 (333)
52 4egv_A Acetyl-COA acetyltransf 99.5 1.1E-13 3.9E-18 147.4 12.6 205 232-459 40-344 (520)
53 3a5r_A Benzalacetone synthase; 99.5 1.3E-13 4.5E-18 141.7 10.5 185 166-408 12-224 (387)
54 1xes_A Dihydropinosylvin synth 99.4 2.5E-13 8.7E-18 140.8 8.6 132 228-409 118-252 (413)
55 3led_A 3-oxoacyl-acyl carrier 99.4 2.6E-12 8.9E-17 132.3 16.0 120 234-408 116-235 (392)
56 1ee0_A 2-pyrone synthase; poly 99.4 2.8E-13 9.4E-18 140.1 8.6 187 164-408 19-233 (402)
57 1i88_A CHS2, chalcone synthase 99.4 3.1E-13 1.1E-17 139.0 8.5 191 164-408 14-228 (389)
58 2d3m_A Pentaketide chromone sy 99.4 6.6E-13 2.3E-17 137.4 10.9 202 164-426 27-257 (406)
59 1xpm_A 3-hydroxy-3-methylgluta 99.4 1.7E-12 5.7E-17 133.9 12.2 162 235-464 51-239 (396)
60 3awk_A Chalcone synthase-like 99.4 1.2E-12 4E-17 135.4 9.2 126 229-408 109-241 (402)
61 3il6_A 3-oxoacyl-[acyl-carrier 99.3 8.6E-12 3E-16 125.0 13.2 167 165-408 3-171 (321)
62 2p0u_A Stilbenecarboxylate syn 99.3 1.8E-12 6.1E-17 134.4 6.9 126 233-408 118-246 (413)
63 3gwa_A 3-oxoacyl-(acyl-carrier 99.3 1.5E-11 5.2E-16 125.4 11.9 174 160-408 24-200 (365)
64 3oit_A OS07G0271500 protein; t 99.2 6.4E-11 2.2E-15 121.7 13.0 128 231-408 92-222 (387)
65 3ov2_A Curcumin synthase; type 99.2 1.3E-11 4.5E-16 127.1 7.4 126 233-408 100-228 (393)
66 2f82_A HMG-COA synthase; HMGS1 99.2 4.4E-10 1.5E-14 117.7 17.8 163 166-408 3-172 (450)
67 3il3_A 3-oxoacyl-[acyl-carrier 99.2 2.8E-10 9.6E-15 114.1 15.1 119 235-408 58-177 (323)
68 3s3l_A CERJ; acyltransferase, 99.2 6.4E-10 2.2E-14 113.0 17.5 121 234-407 53-176 (357)
69 3h78_A PQS biosynthetic enzyme 99.1 5.5E-10 1.9E-14 113.6 15.0 121 235-408 74-195 (359)
70 4efi_A 3-oxoacyl-(acyl-carrier 99.1 2.6E-10 8.9E-15 115.7 11.5 119 235-408 66-186 (354)
71 3euo_A Type III pentaketide sy 99.0 1.4E-09 4.9E-14 111.3 12.0 128 234-408 80-214 (379)
72 4ewp_A 3-oxoacyl-[acyl-carrier 99.0 3.7E-09 1.3E-13 106.8 14.2 118 235-407 62-180 (350)
73 3e1h_A PKSIIINC, putative unch 98.9 5.7E-09 1.9E-13 109.5 12.7 126 236-408 111-243 (465)
74 3v7i_A Putative polyketide syn 98.9 7.3E-09 2.5E-13 107.1 13.1 120 234-408 136-262 (413)
75 2v4w_A Hydroxymethylglutaryl-C 98.8 2.5E-08 8.6E-13 104.1 12.9 139 165-356 4-149 (460)
76 3v4n_A HMG-COA synthase; hydro 98.8 1.2E-08 4.2E-13 104.7 9.7 160 166-406 7-169 (388)
77 3lma_A Stage V sporulation pro 98.8 1.2E-07 4.1E-12 94.9 15.6 122 235-407 55-176 (347)
78 2p8u_A Hydroxymethylglutaryl-C 98.7 1.8E-07 6.3E-12 98.4 14.4 163 165-407 23-192 (478)
79 3sqz_A Putative hydroxymethylg 98.6 4E-08 1.4E-12 101.9 7.2 160 166-406 36-198 (425)
80 2wya_A Hydroxymethylglutaryl-C 98.2 2.2E-06 7.6E-11 89.8 9.6 163 165-407 4-173 (460)
81 2ju1_A Erythronolide synthase; 95.8 0.0019 6.5E-08 51.8 0.6 46 75-126 41-87 (95)
82 2cg5_B Fatty acid synthase; tr 95.8 0.00099 3.4E-08 53.8 -1.3 45 75-126 27-72 (91)
83 2l22_A Mupirocin didomain acyl 94.5 0.02 7E-07 52.9 3.4 47 74-126 45-92 (212)
84 2kr5_A PKS, aflatoxin biosynth 94.1 0.016 5.5E-07 45.6 1.5 46 75-126 31-79 (89)
85 2afd_A Protein ASL1650; twiste 93.8 0.011 3.6E-07 46.3 -0.1 45 76-126 35-80 (88)
86 2liu_A CURA; holo state, trans 93.3 0.018 6.1E-07 46.1 0.4 46 75-126 41-87 (99)
87 4i4d_A Peptide synthetase NRPS 91.5 0.014 4.7E-07 46.8 -2.4 46 75-126 34-80 (93)
88 1nq4_A Oxytetracycline polyket 89.0 0.14 4.8E-06 41.1 1.6 46 75-126 28-74 (95)
89 1dny_A Non-ribosomal peptide s 88.9 0.033 1.1E-06 44.4 -2.2 46 75-126 32-78 (91)
90 2l22_A Mupirocin didomain acyl 88.5 0.11 3.7E-06 48.0 0.6 46 75-126 150-196 (212)
91 1or5_A Acyl carrier protein; A 85.9 0.13 4.5E-06 39.7 -0.3 44 77-126 29-73 (83)
92 4f6l_B AUSA reductase domain p 84.0 0.16 5.4E-06 53.1 -0.9 47 74-127 62-109 (508)
93 2lol_A ACP, acyl carrier prote 83.3 0.41 1.4E-05 36.5 1.5 44 77-126 28-73 (81)
94 2ehs_A ACP, acyl carrier prote 82.3 0.16 5.6E-06 38.2 -1.2 44 77-126 23-68 (77)
95 1l0i_A Acyl carrier protein; a 82.2 0.16 5.5E-06 38.6 -1.3 44 77-126 25-70 (78)
96 2ava_A ACP I, acyl carrier pro 80.5 0.24 8.4E-06 38.0 -0.8 44 77-126 27-71 (82)
97 1f80_D Acyl carrier protein; t 80.3 0.36 1.2E-05 36.8 0.2 45 76-126 28-74 (81)
98 2l3v_A ACP, acyl carrier prote 79.7 0.3 1E-05 37.0 -0.5 45 76-126 25-71 (79)
99 1af8_A Actinorhodin polyketide 79.3 0.29 1E-05 38.0 -0.7 44 77-126 31-75 (86)
100 2dnw_A Acyl carrier protein; A 78.5 0.37 1.3E-05 38.7 -0.3 44 77-126 37-82 (99)
101 1klp_A ACP, ACPM, meromycolate 78.4 1 3.6E-05 37.1 2.4 44 77-126 29-74 (115)
102 2cq8_A 10-formyltetrahydrofola 78.1 0.65 2.2E-05 38.5 1.0 47 75-127 44-92 (110)
103 1x3o_A Acyl carrier protein; s 77.5 0.26 8.9E-06 37.4 -1.5 45 76-126 26-72 (80)
104 2lte_A Specialized acyl carrie 78.0 0.53 1.8E-05 38.3 0.0 45 76-126 47-92 (103)
105 2cnr_A FAS, ACP, acyl carrier 75.7 0.61 2.1E-05 35.5 0.2 44 77-126 29-74 (82)
106 3tej_A Enterobactin synthase c 75.6 0.31 1.1E-05 47.6 -1.8 46 75-126 29-75 (329)
107 2qnw_A Acyl carrier protein; m 75.0 0.67 2.3E-05 35.5 0.3 44 77-126 29-74 (82)
108 2kwl_A ACP, acyl carrier prote 73.9 0.88 3E-05 34.9 0.7 45 76-126 30-76 (84)
109 1vku_A Acyl carrier protein; T 70.6 0.73 2.5E-05 37.3 -0.5 44 77-126 39-83 (100)
110 3gzm_A Acyl carrier protein; h 69.8 1.1 3.9E-05 34.1 0.5 45 76-126 26-72 (81)
111 2px6_A Thioesterase domain; th 66.6 0.93 3.2E-05 43.7 -0.8 36 85-126 2-37 (316)
112 2l4b_A Acyl carrier protein; i 57.3 1.5 5E-05 34.1 -1.1 43 78-126 34-78 (88)
113 2vz8_A Fatty acid synthase; tr 55.6 2.4 8.3E-05 52.9 0.0 45 75-126 2144-2189(2512)
114 2kjs_A Putative acyl carrier p 54.9 1.8 6.3E-05 33.9 -0.8 44 77-126 24-69 (87)
115 4dg8_A PA1221; ANL superfamily 54.6 2.6 8.9E-05 45.1 0.0 46 75-126 542-589 (620)
116 4dxe_H ACP, acyl carrier prote 51.8 4 0.00014 32.9 0.7 44 77-126 48-93 (101)
117 3ejb_A Acyl carrier protein; p 48.3 2.4 8.2E-05 33.8 -1.2 44 77-126 44-89 (97)
118 2vsq_A Surfactin synthetase su 48.0 2.8 9.6E-05 48.9 -1.1 46 75-126 990-1036(1304)
119 1fh1_A NODF, nodulation protei 43.9 4.9 0.00017 31.4 0.1 44 77-126 34-81 (92)
120 2jgp_A Tyrocidine synthetase 3 43.0 3 0.0001 43.0 -1.8 46 75-126 28-74 (520)
121 3rg2_A Enterobactin synthase c 42.3 3.4 0.00012 43.9 -1.5 46 74-126 563-609 (617)
122 2jq4_A AGR_C_4658P, hypothetic 36.1 4.5 0.00016 32.7 -1.4 44 77-126 46-92 (105)
123 3lma_A Stage V sporulation pro 31.5 1.5E+02 0.0053 29.1 8.6 41 323-363 275-316 (347)
124 2kw2_A Specialized acyl carrie 29.9 2.4 8.3E-05 34.0 -4.0 26 80-106 29-55 (101)
125 2fq1_A Isochorismatase; ENTB, 29.1 7.7 0.00026 37.1 -1.3 44 76-126 235-279 (287)
126 2l9f_A CALE8, meacp; transfera 22.2 12 0.0004 30.4 -1.2 28 77-104 37-65 (102)
No 1
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=1.2e-59 Score=491.89 Aligned_cols=301 Identities=42% Similarity=0.701 Sum_probs=277.1
Q ss_pred CCCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHH
Q 012130 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (470)
Q Consensus 161 ~~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L 240 (470)
...+++||||||||++|+|.++++||++|++|+++++++++|+...++.++++.+++||+.+||++++++.|||+++|++
T Consensus 14 ~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l 93 (427)
T 3ho9_A 14 CVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGI 93 (427)
T ss_dssp ---CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHHHHHH
T ss_pred CCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHHHhCCCCc
Q 012130 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (470)
Q Consensus 241 ~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp 319 (470)
+++++||+|||++++ +++..++|||+|++.+++....+.+..+.. +...++|+.++....+.++++|+++||++||
T Consensus 94 ~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp 170 (427)
T 3ho9_A 94 VAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGP 170 (427)
T ss_dssp HHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCCC
Confidence 999999999999876 678889999999999998887777766653 5667899999999999999999999999999
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceeccee
Q 012130 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGa 399 (470)
+++|+++|+||++||++|+++|++|+||++||||+|.+++|..+.+|..+++|+..+..|++.|+|||.+++||++|||+
T Consensus 171 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~geGA 250 (427)
T 3ho9_A 171 SISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGA 250 (427)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEE
T ss_pred eecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCceeeeeE
Confidence 99999999999999999999999999999999999999999999999999999987777888999999999999999999
Q ss_pred EeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 400 galvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
++||||++++|+++|++||++|+|+++++||++++.|++.+.++. +.+++ .+|+|||+|||||.+
T Consensus 251 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~ 324 (427)
T 3ho9_A 251 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPA 324 (427)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCC
Confidence 999999999999999999999999999999999999977765544 33322 299999999999975
No 2
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=100.00 E-value=5e-60 Score=491.84 Aligned_cols=296 Identities=33% Similarity=0.513 Sum_probs=271.3
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
|++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++++++ ||+.+|+++++++.|||+++|+++++
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa 79 (406)
T 2vba_A 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSM 79 (406)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHH
Confidence 36899999999999999999999999999999999998888788888899998 99999999999999999999999999
Q ss_pred HHHHHhCCCCcccccccCC-CeeEEEEeccCCchhhHHHHHHHHH--hhhhcCCCccccccchhhHHHHHHHHhCCCCcc
Q 012130 244 KKALADGGITEDVMNELDK-SKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 320 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~-~rvGV~vG~~~g~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps 320 (470)
++||+|||++++ +++. +|+|||+|++.+++...++.+..+. .+...++|+.++....++++++|+++||++||+
T Consensus 80 ~~Al~dAg~~~~---~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~ 156 (406)
T 2vba_A 80 EQAIADAGLSPE---AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVN 156 (406)
T ss_dssp HHHHHHHTCCHH---HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCE
T ss_pred HHHHHHCCCChh---HcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCce
Confidence 999999999875 5666 8999999999999988777776664 344567888888889999999999999999999
Q ss_pred eeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccC-CCCCCCCCCcCCCCCCCcceeccee
Q 012130 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ-RNNDPTKASRPWDINRDGFVMGEGA 399 (470)
Q Consensus 321 ~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~-~~~~~~~~~rpFd~~adG~v~GEGa 399 (470)
++|+++|+||++||++|+++|++|+||++||||+|.++++..+. |..+++|++ ++++|++.|||||+++|||++|||+
T Consensus 157 ~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGa 235 (406)
T 2vba_A 157 YSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGG 235 (406)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEE
T ss_pred eeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceEeeceE
Confidence 99999999999999999999999999999999999988888777 999999985 4555889999999999999999999
Q ss_pred EeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh----ccccEEEEeeeccee
Q 012130 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN----FSVQMKSLNGFGKFY 464 (470)
Q Consensus 400 galvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~----~~i~~veahGtGT~l 464 (470)
+++|||++++|+++|++||++|+|+++++|++|++.|++.++...+.+++ .+|+|||+|||||.+
T Consensus 236 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag~dId~ve~HgtgT~~ 304 (406)
T 2vba_A 236 GMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGTSTPV 304 (406)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCCSCCCEEECCCCSCHH
T ss_pred EEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCCCCccEEEeeCccCcc
Confidence 99999999999999999999999999999999999999877776665554 289999999999975
No 3
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=100.00 E-value=2.6e-59 Score=487.30 Aligned_cols=298 Identities=30% Similarity=0.399 Sum_probs=278.2
Q ss_pred CCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCC-CCCccccccccCCCCCCCCCccccccCCHHHHHHHH
Q 012130 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT-SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (470)
Q Consensus 163 ~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~-~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~ 241 (470)
.|++|||||||+++|+|.+.++||++|.+|+++++++++|+.. .++.++.+.+++||+.+||++++++.|||+++|+++
T Consensus 4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 83 (412)
T 4ewg_A 4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR 83 (412)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence 4679999999999999999999999999999999999998876 788889999999999999999999999999999999
Q ss_pred HHHHHHHhCCC-CcccccccCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHHHhCCCCc
Q 012130 242 AGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (470)
Q Consensus 242 aa~eALedAG~-~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp 319 (470)
++++||+|||+ +++ +++..++|||+|++.+++...++++..+.. +...++|+.++....+.++++|+++||++||
T Consensus 84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 160 (412)
T 4ewg_A 84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR 160 (412)
T ss_dssp HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence 99999999999 554 678899999999999999888888777664 5567888888999999999999999999999
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceeccee
Q 012130 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGa 399 (470)
+++|+++|+||++||++|+++|++|+||++||||+|. ++|..+..|.+++.|+..+++|++.|||||.++|||++|||+
T Consensus 161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGA 239 (412)
T 4ewg_A 161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA 239 (412)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEE
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeE
Confidence 9999999999999999999999999999999999999 999999999999999987788899999999999999999999
Q ss_pred EeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhhc-------cccEEEEeeeccee
Q 012130 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLNF-------SVQMKSLNGFGKFY 464 (470)
Q Consensus 400 galvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~~-------~i~~veahGtGT~l 464 (470)
++||||++++|+++|++||++|+|+++++||+|++.|++.++...+.+++. +|+|||+|||||.+
T Consensus 240 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~ 311 (412)
T 4ewg_A 240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDR 311 (412)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHH
T ss_pred EEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCcc
Confidence 999999999999999999999999999999999999998888777665542 99999999999975
No 4
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=4.4e-59 Score=486.13 Aligned_cols=300 Identities=41% Similarity=0.713 Sum_probs=274.5
Q ss_pred CCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHH
Q 012130 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~ 241 (470)
++|++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++.+++||+.+++++++++.|||+++|+++
T Consensus 4 ~~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~ 83 (416)
T 1e5m_A 4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVC 83 (416)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence 34678999999999999999999999999999999999999998899999999999999989999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhCCCCcc
Q 012130 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 320 (470)
Q Consensus 242 aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps 320 (470)
++++||+|||++++ ++++.++|||+|++.+++..+++.+..+. .+....+|+.++....++++++|++.||++||+
T Consensus 84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 160 (416)
T 1e5m_A 84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN 160 (416)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence 99999999999876 67788999999999998887777666554 355678999999889999999999999999999
Q ss_pred eeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeE
Q 012130 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (470)
Q Consensus 321 ~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGag 400 (470)
++|+++|+||++||++|+++|++|+||++||||+|.+++|..+.+|..+++|+.++++|++.|||||.++||+++|||++
T Consensus 161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaa 240 (416)
T 1e5m_A 161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEE
T ss_pred eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEE
Confidence 99999999999999999999999999999999999989999999999999999777778999999999999999999999
Q ss_pred eEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 401 alvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
++|||++++|+++|++||++|+|+++++|+++++.|+|++.++. +.+++ .+|+|||+|||||.+
T Consensus 241 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~ 313 (416)
T 1e5m_A 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPA 313 (416)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcC
Confidence 99999999999999999999999999999999999988765444 33332 299999999999975
No 5
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=100.00 E-value=7.3e-58 Score=479.78 Aligned_cols=297 Identities=40% Similarity=0.674 Sum_probs=272.1
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++.+.+++||+.+++++++++.|||+++|+++++
T Consensus 27 ~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa 106 (437)
T 2gqd_A 27 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAA 106 (437)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHH
T ss_pred CCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHH
Confidence 47899999999999999999999999999999999999998889999999999999988899999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhCCCCccee
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps~t 322 (470)
++||+|||++++ ++++.++|||+|++.+++..+++.+..+. .+...++|+.++....++++++|++.||++||+++
T Consensus 107 ~~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~ 183 (437)
T 2gqd_A 107 REAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGA 183 (437)
T ss_dssp HHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEEC
T ss_pred HHHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEE
Confidence 999999999876 67788999999999998877776666554 35567889888888899999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|+++|+||++||++|+++|++|+||+|||||+|.+++|..+.+|..+++|++ +++|++.|||||+++||+++|||++++
T Consensus 184 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~G~v~geGaaav 262 (437)
T 2gqd_A 184 TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGIL 262 (437)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSSCTTCTTCCSBCBBCEEEEE
T ss_pred ecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC-CCCCccccCCCCCCCCCceeeceEEEE
Confidence 9999999999999999999999999999999999899999999999999985 345889999999999999999999999
Q ss_pred eeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 403 vLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
|||++++|+++|++||++|+|+++++|+++++.|+|+++++. +.+++ .+|+|||+|||||.+
T Consensus 263 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~ 333 (437)
T 2gqd_A 263 VIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPV 333 (437)
T ss_dssp EEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcC
Confidence 999999999999999999999999999999999988766544 33322 299999999999975
No 6
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=100.00 E-value=1.5e-58 Score=483.85 Aligned_cols=299 Identities=35% Similarity=0.487 Sum_probs=272.6
Q ss_pred CCCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHH
Q 012130 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (470)
Q Consensus 161 ~~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L 240 (470)
++.+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++. .+||+.+||++++++.|||+++|++
T Consensus 19 ~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~~~l~~ 97 (428)
T 3mqd_A 19 PGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRGTAWNH 97 (428)
T ss_dssp ---CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHHHHHHH
T ss_pred CCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHHHHHHH
Confidence 456789999999999999999999999999999999999988877888888887 5899999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhCCCCc
Q 012130 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (470)
Q Consensus 241 ~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp 319 (470)
+++++||+|||++++ +++..++|||+|++.+++..+.+++..+. .+...++|+.+++...++++++|++.||++||
T Consensus 98 ~aa~~Al~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 174 (428)
T 3mqd_A 98 IAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGI 174 (428)
T ss_dssp HHHHHHHHHHTCCHH---HHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHcCCChh---HccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCc
Confidence 999999999999976 67889999999999988887777766655 46677899999999999999999999999999
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC-CCCCCCCCcCCCCCCCcceecce
Q 012130 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMGEG 398 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~-~~~~~~~~rpFd~~adG~v~GEG 398 (470)
+++|+++|+||++||++|+++|++|+||++||||+|. +++.....|..+++++.. +++|++.|||||.++|||++|||
T Consensus 175 ~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEG 253 (428)
T 3mqd_A 175 NYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGG 253 (428)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCE
T ss_pred eeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccc
Confidence 9999999999999999999999999999999999999 566667779999999865 56789999999999999999999
Q ss_pred eEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh----ccccEEEEeeeccee
Q 012130 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN----FSVQMKSLNGFGKFY 464 (470)
Q Consensus 399 agalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~----~~i~~veahGtGT~l 464 (470)
+++||||++++|+++|++||++|+|+++++||++++.|++.++..++.+++ .+|+|||+|||||.+
T Consensus 254 AaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~gl~~dId~ve~HgtgT~~ 323 (428)
T 3mqd_A 254 AGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALSTVTSKIDYINPHATSTPA 323 (428)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHTTCCSCCCEEECCCCSCHH
T ss_pred eEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhCCccccCEEEEeCCCCCC
Confidence 999999999999999999999999999999999999998888877766554 389999999999975
No 7
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.5e-58 Score=483.35 Aligned_cols=296 Identities=31% Similarity=0.481 Sum_probs=267.5
Q ss_pred CcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCC-CCccccccCCHHHHHHHHHH
Q 012130 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 165 ~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~f-i~p~ea~~mdp~~rl~L~aa 243 (470)
++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++.+++ +||+.+| |++++++.|||+++|+++++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~aa 81 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVACA 81 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999988888888888 8999999 99999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH---hhhhcCCCccccccchhhHHH----HHHHHhCC
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR---ISYKKMNPFCVPFATTNMGSA----MLAMDLGW 316 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~a~----~is~~~gl 316 (470)
++||+|||++++ +++..|+|||+|++.+++...++.+..+. .+....+++.++...+++.++ +|+++||+
T Consensus 82 ~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl 158 (424)
T 1tqy_A 82 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA 158 (424)
T ss_dssp HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence 999999999876 67788999999999999888777776654 234456677666666665555 99999999
Q ss_pred CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceec
Q 012130 317 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 396 (470)
Q Consensus 317 ~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~G 396 (470)
+||+++|+++|+||++||++|+++|++|+||++||||+|.+++|..+.+|..+++++..+.+|++.|||||.++||+++|
T Consensus 159 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 238 (424)
T 1tqy_A 159 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLA 238 (424)
T ss_dssp CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCEE
T ss_pred CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceeee
Confidence 99999999999999999999999999999999999999998999999999999999977777899999999999999999
Q ss_pred ceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 397 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 397 EGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
||++++|||++++|+++|++||++|+|+++++||++++.|+|+++++. +.+++ .+|+|||+|||||.+
T Consensus 239 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~ 315 (424)
T 1tqy_A 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQ 315 (424)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred cceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcC
Confidence 999999999999999999999999999999999999999998765444 33322 299999999999975
No 8
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-57 Score=474.99 Aligned_cols=299 Identities=40% Similarity=0.715 Sum_probs=276.4
Q ss_pred CCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHH
Q 012130 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~ 241 (470)
|.+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++++++||+.+||++++++.|||+++|+++
T Consensus 1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 80 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIA 80 (413)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence 34679999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHHHhCCCCcc
Q 012130 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 320 (470)
Q Consensus 242 aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps 320 (470)
++++||+|||++++ ++++.++|||+|++.+++..++..+..+.. +....+|+.++....++++++|++.||++||+
T Consensus 81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 157 (413)
T 3o04_A 81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN 157 (413)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence 99999999999876 778899999999999999888877776653 56678899999999999999999999999999
Q ss_pred eeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeE
Q 012130 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (470)
Q Consensus 321 ~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGag 400 (470)
++|+++|+|+++||++|+++|++|+||++||||+|.+++|..+.+|..+++++. +.+|++.|+|||.+++|+++|||++
T Consensus 158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~g~~~gdGAa 236 (413)
T 3o04_A 158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL-NPDPETACRPFDKDRDGFIIGEGAG 236 (413)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSCCTTBTTCCSBCBBCEEE
T ss_pred eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC-CCCCCCCcCCCcCCCCCceEeccEE
Confidence 999999999999999999999999999999999999999999999999999984 4458899999999999999999999
Q ss_pred eEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 401 alvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
++|||++++|+++|++||++|+|+++++||+|++.|.|.+.++. +.+++ .+|+|||+|||||.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~ 309 (413)
T 3o04_A 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPY 309 (413)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred EEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
Confidence 99999999999999999999999999999999999999875444 33322 299999999999985
No 9
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=6.1e-58 Score=477.39 Aligned_cols=296 Identities=25% Similarity=0.367 Sum_probs=273.6
Q ss_pred CCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHH
Q 012130 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 242 (470)
Q Consensus 163 ~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~a 242 (470)
..++|+|||||+++|+|.+.++||++|.+|+++++++++|+...++.++++++++||+.+|+++++++.|||+++|++++
T Consensus 7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~a 86 (415)
T 1tqy_B 7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTA 86 (415)
T ss_dssp ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHH
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHH
Confidence 45789999999999999999999999999999999999999888888999999999999889999999999999999999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHHHhCCCCcce
Q 012130 243 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 321 (470)
Q Consensus 243 a~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps~ 321 (470)
+++||+|||++++ +++..++|||+|++.+++...++.+..+.. +...++|+.+++...+.++++|+++||++||++
T Consensus 87 a~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 163 (415)
T 1tqy_B 87 ADWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS 163 (415)
T ss_dssp HHHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence 9999999999976 677889999999999999888877776653 556789999999999999999999999999999
Q ss_pred eecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEe
Q 012130 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (470)
Q Consensus 322 tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGaga 401 (470)
+|+++|+||++||++|+++|++| ||++||||+|.++++..+.+|..+++|+. +++|++.|+|||.+++|+++|||+++
T Consensus 164 ~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~pfd~~~~G~~~geGaaa 241 (415)
T 1tqy_B 164 ALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST-ATDPDRAYLPFDERAAGYVPGEGGAI 241 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC-CSCGGGSCCTTSTTCCCBCBBCEEEE
T ss_pred eecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC-CCCCCCCcCCCCCCCCCcceeeeEEE
Confidence 99999999999999999999999 99999999999999999999999999986 55578899999999999999999999
Q ss_pred EeeccchhHHhcCC-eeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhhc-------cccEEEEeeeccee
Q 012130 402 LLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLNF-------SVQMKSLNGFGKFY 464 (470)
Q Consensus 402 lvLe~l~~A~~~G~-~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~~-------~i~~veahGtGT~l 464 (470)
+|||++++|+++|+ +||++|+|+++++||++++.|++ ++..++.+++. +|+|||+|||||.+
T Consensus 242 vvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~-~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 311 (415)
T 1tqy_B 242 LVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA-GLERAIRLALNDAGTGPEDVDVVFADGAGVPE 311 (415)
T ss_dssp EEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC-SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHH
T ss_pred EEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH-HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcC
Confidence 99999999999999 99999999999999999999999 87776655542 99999999999964
No 10
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=6.8e-58 Score=475.99 Aligned_cols=297 Identities=42% Similarity=0.735 Sum_probs=273.3
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
|++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++++ +||+.+|+++++++.|||+++|+++++
T Consensus 1 M~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa 79 (408)
T 1j3n_A 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA 79 (408)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999888899999999 899999999999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhCCCCccee
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps~t 322 (470)
++||+|||++++ +++..++|||+|++.+++..+.+.+..+. .+...++|+.++....++++++|++.||++||+++
T Consensus 80 ~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~ 156 (408)
T 1j3n_A 80 QLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST 156 (408)
T ss_dssp HHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred HHHHHHcCCCcc---ccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeC
Confidence 999999999976 67788999999999999887777666554 35667899988888999999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|+++|+||++||++|+++|++|+||++||||+|.+++|..+.+|..+++|+..++.|++.|||||.++||+++|||++++
T Consensus 157 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaav 236 (408)
T 1j3n_A 157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVL 236 (408)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEE
T ss_pred ccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEEE
Confidence 99999999999999999999999999999999998999999999999999977777889999999999999999999999
Q ss_pred eeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 403 vLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
|||++++|+++|++||++|+|+++++|+++++.|+|.++++. +.+++ .+|+|||+|||||.+
T Consensus 237 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 307 (408)
T 1j3n_A 237 VLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPV 307 (408)
T ss_dssp EEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
Confidence 999999999999999999999999999999999988766544 33222 299999999999975
No 11
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=1.7e-57 Score=475.69 Aligned_cols=298 Identities=41% Similarity=0.690 Sum_probs=273.3
Q ss_pred CCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCcccccccc-------CCCCCCCCCccccccCCH
Q 012130 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-------SFSTDGWVAPKLSKRMDK 234 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~-------~fd~~~fi~p~ea~~mdp 234 (470)
..|++|||||||+++|+|.++++||++|++|+++|+++++|+.+.++.++++.++ .||+.+||++++++.|||
T Consensus 7 ~~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~ 86 (428)
T 3kzu_A 7 HHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVDP 86 (428)
T ss_dssp --CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSCH
T ss_pred ccccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCCH
Confidence 4578999999999999999999999999999999999999999988888888887 899999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccc-cCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHH
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNE-LDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAM 312 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~-~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~ 312 (470)
+++|+++++++||+|||++++ + ++..++|||+|++.+++....+++..+.. +...++|+.++....++.+++|++
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~---~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 163 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPE---NDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI 163 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCC---SHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCChh---hhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence 999999999999999999876 4 66778999999999998888777776654 566789999999999999999999
Q ss_pred HhCCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC-CCCCCCCCcCCCCCCC
Q 012130 313 DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRD 391 (470)
Q Consensus 313 ~~gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~-~~~~~~~~rpFd~~ad 391 (470)
.||++||+++|+++|+|+++||++|+++|++|+||++||||+|.+++|..+..|...+.|+.. +++|++.|+|||.++|
T Consensus 164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 243 (428)
T 3kzu_A 164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRD 243 (428)
T ss_dssp HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCC
T ss_pred HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999965 5668899999999999
Q ss_pred cceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeecc
Q 012130 392 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGK 462 (470)
Q Consensus 392 G~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT 462 (470)
|+++|||++++|||++++|+++|++||++|+|+++++||++++.|++.+.++. +.+++ .+|+|||+|||||
T Consensus 244 G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT 323 (428)
T 3kzu_A 244 GFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST 323 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS
T ss_pred ceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc
Confidence 99999999999999999999999999999999999999999999988855443 33322 2999999999999
No 12
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=100.00 E-value=3.2e-57 Score=474.02 Aligned_cols=300 Identities=43% Similarity=0.673 Sum_probs=273.6
Q ss_pred CCCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHH
Q 012130 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (470)
Q Consensus 161 ~~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L 240 (470)
.+.|++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++.+.+++||+.+|+++++++.|||+++|++
T Consensus 19 ~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l 98 (430)
T 1ox0_A 19 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYAL 98 (430)
T ss_dssp SCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHH
T ss_pred cccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHH
Confidence 35578999999999999999999999999999999999999999889999999999999988899999999999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhCCCCc
Q 012130 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (470)
Q Consensus 241 ~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gp 319 (470)
+++++||+|||++++ +++..++|||+|++.+++....+.+..+. .+...++|+.++....++++++|++.||++||
T Consensus 99 ~aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp 175 (430)
T 1ox0_A 99 YAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGV 175 (430)
T ss_dssp HHHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCc
Confidence 999999999999876 67788999999999998877776665554 45667899999999999999999999999999
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceeccee
Q 012130 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGa 399 (470)
+++|+++|+||++||++|+++|++|+||++||||+|.+++|..+.+|..+++|+. ++.|++.|||||+++||+++|||+
T Consensus 176 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~-~~~p~~~~~pFd~~~~g~~~geGA 254 (430)
T 1ox0_A 176 CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST-TEDPTRASIPFDKDRNGFVMGEGS 254 (430)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CSSTTSSSCTTBTTCCSBCBCCEE
T ss_pred eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC-CCCCCCCCCCCCCCCCCccccceE
Confidence 9999999999999999999999999999999999999999999999999999985 345889999999999999999999
Q ss_pred EeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 400 galvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
+++|||++++|+++|++||++|+|+++++|+++++.|++++.++. +.+++ .+|+|||+|||||.+
T Consensus 255 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 328 (430)
T 1ox0_A 255 GMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPA 328 (430)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHH
T ss_pred EEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcc
Confidence 999999999999999999999999999999999999987755443 33332 299999999999975
No 13
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=100.00 E-value=1.3e-57 Score=478.08 Aligned_cols=297 Identities=36% Similarity=0.595 Sum_probs=269.9
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccC------CCCCCCCCccccccCCHHHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS------FSTDGWVAPKLSKRMDKFML 237 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~------fd~~~fi~p~ea~~mdp~~r 237 (470)
+++|||||||+++|+|.++++||++|.+|+++++++++|+...++.++++.+++ ||+.+|+++++++.|||+++
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~ 99 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI 99 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence 468999999999999999999999999999999999999988888899998877 99999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCc-ccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 238 YLLTAGKKALADGGITE-DVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 238 l~L~aa~eALedAG~~~-~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
|+++++++||+|||+++ + +++..++|||+|++.+++..+.+.+..+. .+...++|+.+++...++++++|++.||
T Consensus 100 l~l~aa~~AL~dAGl~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 100 MAIGAAELAMKDSGWHPQS---EADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHTCCCCS---HHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCcc---cccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 99999999999999986 5 55667899999999999887777766654 3556788988888889999999999999
Q ss_pred CCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCccee
Q 012130 316 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 395 (470)
Q Consensus 316 l~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~ 395 (470)
++||+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+.+|..+++|++. .+|++.|||||.+++|+++
T Consensus 177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN-SDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-SCTTTSCCTTCTTCCSBCB
T ss_pred CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC-CCCCcccccCCCCCCCEEe
Confidence 999999999999999999999999999999999999999998999999999999999853 2478999999999999999
Q ss_pred cceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 396 GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
|||+++||||++++|+++|++||++|+|+++++|+++++.|++++.++. +.+++ .+|+|||+|||||.+
T Consensus 256 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~ 333 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPL 333 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred eceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcc
Confidence 9999999999999999999999999999999999999999987665444 33332 299999999999975
No 14
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=100.00 E-value=9.4e-58 Score=557.63 Aligned_cols=283 Identities=22% Similarity=0.332 Sum_probs=253.8
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCC-CCCCCCCC-cccccc---ccCCCCCCC-CCccccccCCHHHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE-TFDCTSFP-TKIAAE---IKSFSTDGW-VAPKLSKRMDKFML 237 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~-~~~~~~~~-~~~~g~---i~~fd~~~f-i~p~ea~~mdp~~r 237 (470)
|++||||||||++|+|.++++||++|.+|++++++.+ +|+...+. ....|. ++.||+.|| |+|+|++.||||||
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r 80 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR 80 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence 4689999999999999999999999999999999985 46654221 234454 456999999 99999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC
Q 012130 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (470)
Q Consensus 238 l~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~ 317 (470)
++|+++||||||||++++ .++++++|||+|++.++|... +......++++.+++...+++++||||+|||+
T Consensus 81 l~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~ 151 (2512)
T 2vz8_A 81 MLLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSDASEA------LSRDPETLVGYSMIGCQRAMMANRLSFFFDFK 151 (2512)
T ss_dssp HHHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCHHHHH------TTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHHHHHH------HhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence 999999999999999976 778899999999997765422 22234567888899999999999999999999
Q ss_pred CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecc
Q 012130 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (470)
Q Consensus 318 Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GE 397 (470)
||+++|+||||||++|||+||++|++|+||+|||||+|.+++|..+.+|+++++|| |+++|||||+++|||++||
T Consensus 152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-----~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-----TTCSCCSSSTTCCCBCBBC
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-----CCCCCCCCCCCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred eeEeEeeccchhHHhcCCeeeEEEEEEeeccCCC---CCCCcCcCchhHHHHHhhc-------cccEEEEeeeccee
Q 012130 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEPHPDGKSAMSLRLNF-------SVQMKSLNGFGKFY 464 (470)
Q Consensus 398 GagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~---~~t~P~p~g~~~~~~~~~~-------~i~~veahGtGT~l 464 (470)
|+|+||||++++|+ +|||+|+|+++|+||+ ++|+|++.+|..++.+++. +|+|||+|||||.+
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~ 299 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKV 299 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTT
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCC
Confidence 99999999999996 5999999999999995 6999999999888776653 89999999999976
No 15
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=100.00 E-value=1.4e-56 Score=467.25 Aligned_cols=297 Identities=30% Similarity=0.468 Sum_probs=269.5
Q ss_pred CCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCC--CCCCCccccccccCCCCCCCCCccccccCCHHHHHH
Q 012130 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 239 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~--~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~ 239 (470)
..+++||||||||++|+|.++++||++|.+|+++++++++|+ ...++.++++.+++ |+.+|+++++++.|||+++|+
T Consensus 9 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~ 87 (416)
T 2wge_A 9 GGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMG 87 (416)
T ss_dssp TSSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHH
T ss_pred CCCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHH
Confidence 345789999999999999999999999999999999999987 55678888999988 888889999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHH-hhhhcCCCccccccchhhHHHHHHHHhCCCC
Q 012130 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 318 (470)
Q Consensus 240 L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G 318 (470)
++++++||+|||+. .++.+++|||+|++.+++...++.+..+. .+...++|+.++....+..+++|++.||++|
T Consensus 88 l~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 162 (416)
T 2wge_A 88 KLLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARA 162 (416)
T ss_dssp HHHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCC
Confidence 99999999999993 56778999999999999987777776654 3556789998899999999999999999999
Q ss_pred cceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecce
Q 012130 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (470)
Q Consensus 319 ps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEG 398 (470)
|+++|+++|+||++||++|+++|++|+||++||||+|.++.+..+..|..++.++..+.+|++.|||||+++||+++|||
T Consensus 163 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geG 242 (416)
T 2wge_A 163 GVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEA 242 (416)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCE
T ss_pred CcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCc
Confidence 99999999999999999999999999999999999999999989999999999997777789999999999999999999
Q ss_pred eEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 399 agalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
++++|||++++|+++|++||++|+|+++++|+++++.|++.+.++. +.+++ .+|+|||+|||||.+
T Consensus 243 aaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~ 317 (416)
T 2wge_A 243 GALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPI 317 (416)
T ss_dssp EEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred eEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcC
Confidence 9999999999999999999999999999999999999977654443 33332 299999999999975
No 16
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-56 Score=467.19 Aligned_cols=297 Identities=29% Similarity=0.462 Sum_probs=268.8
Q ss_pred CCCCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCC--CCCCCccccccccCCCCCCCCCccccccCCHHHHHH
Q 012130 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 239 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~--~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~ 239 (470)
..+++|||||||+++|+|.++++||++|++|+++++++++|+ ...++.++++++++ |+.+|+++++++.|||+++|+
T Consensus 25 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~ 103 (434)
T 2gp6_A 25 KAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMS 103 (434)
T ss_dssp TTSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHH
T ss_pred CCCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHH
Confidence 345789999999999999999999999999999999999987 56678888899987 888889999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHHHhCCCC
Q 012130 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMG 318 (470)
Q Consensus 240 L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~~~gl~G 318 (470)
++++++||+|||+. .+++.++|||+|++.+++....+.+..+.. +...++|+.+++...++++++|+++||++|
T Consensus 104 l~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~G 178 (434)
T 2gp6_A 104 TVLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKA 178 (434)
T ss_dssp HHHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCC
Confidence 99999999999993 567889999999999999887777766543 455678888888889999999999999999
Q ss_pred cceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcc-cccCCCCCCCCCCcCCCCCCCcceecc
Q 012130 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKASRPWDINRDGFVMGE 397 (470)
Q Consensus 319 ps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~-~Ls~~~~~~~~~~rpFd~~adG~v~GE 397 (470)
|+++|+++|+|+++||++|+++|++|+||++||||+|.++.|..+..|+.++ +++..+..|++.|+|||.+++|+++||
T Consensus 179 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gd 258 (434)
T 2gp6_A 179 GVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGE 258 (434)
T ss_dssp CEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBC
T ss_pred CeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceec
Confidence 9999999999999999999999999999999999999999999999999999 888777778999999999999999999
Q ss_pred eeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeeccee
Q 012130 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 398 GagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~l 464 (470)
|++++|||++++|+++|++||++|+|+++++||++++.|++.+.++. +.+++ .+|+|||+|||||.+
T Consensus 259 GAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 334 (434)
T 2gp6_A 259 GGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQV 334 (434)
T ss_dssp CEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
Confidence 99999999999999999999999999999999999999977755443 33332 199999999999975
No 17
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=100.00 E-value=4e-56 Score=504.54 Aligned_cols=283 Identities=23% Similarity=0.375 Sum_probs=251.6
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCC-CCCCCCC-Cccccc---cccCCCCCCC-CCccccccCCHHHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE-TFDCTSF-PTKIAA---EIKSFSTDGW-VAPKLSKRMDKFML 237 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~-~~~~~~~-~~~~~g---~i~~fd~~~f-i~p~ea~~mdp~~r 237 (470)
+++||||||||++|+|.++++||++|.+|++++++++ +|+...+ .....+ +++.||+.+| |+|+|++.||||||
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 5789999999999999999999999999999999985 4543222 122233 4556999999 99999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC
Q 012130 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (470)
Q Consensus 238 l~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~ 317 (470)
|+++++|+||||||++++ ++++.++|||+|++.++|.. .+......++++.+++...++++++|+++|||+
T Consensus 83 L~leaa~eALedAGi~~~---~i~~~~~Gv~vG~~~~d~~~------~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~ 153 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSGSETSE------ALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR 153 (965)
T ss_dssp HHHHHHHHHHHHTTCCGG---GGTTSCCEEEEEECCCHHHH------HHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCChH---HcCCceeEEEEeccchhHHH------HHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence 999999999999999987 78899999999998765532 222344567778888888999999999999999
Q ss_pred CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecc
Q 012130 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (470)
Q Consensus 318 Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GE 397 (470)
||+++|+|+||||++||++||++|++|+||+|||||+|.+++|..+..|+++++|| |+++|||||.++|||++||
T Consensus 154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-----~~g~~~~Fd~~adG~~~gE 228 (965)
T 3hhd_A 154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRSE 228 (965)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-----TTCCCCTTBTTCCSBCBBC
T ss_pred CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-----CCCccccchhccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred eeEeEeeccchhHHhcCCeeeEEEEEEeeccCCC---CCCCcCcCchhHHHHHhhc-------cccEEEEeeeccee
Q 012130 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEPHPDGKSAMSLRLNF-------SVQMKSLNGFGKFY 464 (470)
Q Consensus 398 GagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~---~~t~P~p~g~~~~~~~~~~-------~i~~veahGtGT~l 464 (470)
|+|+||||++++|+ +||++|+|+++|+||+ +++.|++++|..++.+++. +|+|||+|||||.+
T Consensus 229 GagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~ 301 (965)
T 3hhd_A 229 GVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKV 301 (965)
T ss_dssp EEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTT
T ss_pred eEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCC
Confidence 99999999999996 4999999999999996 4899999888888766652 99999999999965
No 18
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=100.00 E-value=9.6e-56 Score=462.95 Aligned_cols=294 Identities=38% Similarity=0.654 Sum_probs=262.1
Q ss_pred CcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCC--------------CCCCcccccccc------CCCCCCCC
Q 012130 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTDGWV 224 (470)
Q Consensus 165 ~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~--------------~~~~~~~~g~i~------~fd~~~fi 224 (470)
++||||||||++|+|.++++||++|++|+++++++++|+. ..++.+++++++ +||+.+|+
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 3799999999999999999999999999999999998873 345667778877 79988888
Q ss_pred CccccccCCHHHHHHHHHHHHHHHhCCC-CcccccccCCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccc
Q 012130 225 APKLSKRMDKFMLYLLTAGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFAT 302 (470)
Q Consensus 225 ~p~ea~~mdp~~rl~L~aa~eALedAG~-~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~ 302 (470)
+++ .|||+++|+++++++||+|||+ +++ +++..++|||+|++.+++..+.+.+..+.. +...++|+.++...
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 154 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPTE---EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL 154 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCCS---HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCcc---ccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence 876 8999999999999999999999 765 566779999999999988877777666553 45667888888888
Q ss_pred hhhHHHHHHHHhCCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC-CCCCCC
Q 012130 303 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTK 381 (470)
Q Consensus 303 ~~~~a~~is~~~gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~-~~~~~~ 381 (470)
.++++++|++.||++||+++|+++|+||++||++|+++|++|+||++||||+|.++++..+.+|..+++|+++ +.+|++
T Consensus 155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 234 (431)
T 2ix4_A 155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQE 234 (431)
T ss_dssp TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGG
T ss_pred hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999854 456789
Q ss_pred CCcCCCCCCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccc
Q 012130 382 ASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSV 452 (470)
Q Consensus 382 ~~rpFd~~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i 452 (470)
.|||||.+++|+++|||++++|||++++|+++|++||++|+|+++++||++++.|++.++++. +.+++ .+|
T Consensus 235 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 314 (431)
T 2ix4_A 235 ASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQI 314 (431)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 999999999999999999999999999999999999999999999999999999977665444 33322 299
Q ss_pred cEEEEeeeccee
Q 012130 453 QMKSLNGFGKFY 464 (470)
Q Consensus 453 ~~veahGtGT~l 464 (470)
+|||+|||||.+
T Consensus 315 d~ve~HgtgT~~ 326 (431)
T 2ix4_A 315 DYVNAHATSTPI 326 (431)
T ss_dssp CEEECCCCSCHH
T ss_pred CEEEEeCCcCcc
Confidence 999999999975
No 19
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=100.00 E-value=1.9e-55 Score=463.12 Aligned_cols=298 Identities=35% Similarity=0.571 Sum_probs=272.7
Q ss_pred CCcEEEEeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCcccccccc--------CCCCCCCCCccccccCCHH
Q 012130 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK--------SFSTDGWVAPKLSKRMDKF 235 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~--------~fd~~~fi~p~ea~~mdp~ 235 (470)
+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++++.++ +||+.+||++++++.|||+
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 102 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF 102 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence 47899999999999999999999999999999999999988888888888887 7999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCccccccc-CCCeeEEEEeccCCchhhHHHHHHHHHh-hhhcCCCccccccchhhHHHHHHHH
Q 012130 236 MLYLLTAGKKALADGGITEDVMNEL-DKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~-~~~rvGV~vG~~~g~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
++|+++++++||+|||++++ ++ +..++|||+|++.+++....+++..+.. +...++|+.++....++++++|++.
T Consensus 103 ~~L~l~Aa~~AL~dAGl~~~---~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 179 (451)
T 4ddo_A 103 IQMAMVAADEALAEAGWAPE---AEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIK 179 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCC---SHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChh---hcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHH
Confidence 99999999999999999876 55 6789999999999999888887776654 5567899999999999999999999
Q ss_pred hCCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC-CCCCCCCCcCCCCCCCc
Q 012130 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDG 392 (470)
Q Consensus 314 ~gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~-~~~~~~~~rpFd~~adG 392 (470)
||++||+++|+++|+|+++||++|+++|++|+||++||||+|.++++..+..|...++++.. +++|.+.|+|||.++||
T Consensus 180 lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g 259 (451)
T 4ddo_A 180 HRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDG 259 (451)
T ss_dssp HTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCS
T ss_pred hcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999965 55678899999999999
Q ss_pred ceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHH--HHHhh-------ccccEEEEeeecce
Q 012130 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAM--SLRLN-------FSVQMKSLNGFGKF 463 (470)
Q Consensus 393 ~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~--~~~~~-------~~i~~veahGtGT~ 463 (470)
+++|||++++|||++++|+++|++||++|+|+++++|+++++.|.+++.++. +.+++ .+|+|||+|||||.
T Consensus 260 ~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~ 339 (451)
T 4ddo_A 260 FVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTP 339 (451)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred cEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCc
Confidence 9999999999999999999999999999999999999999999987755443 33332 29999999999997
Q ss_pred e
Q 012130 464 Y 464 (470)
Q Consensus 464 l 464 (470)
+
T Consensus 340 ~ 340 (451)
T 4ddo_A 340 V 340 (451)
T ss_dssp H
T ss_pred c
Confidence 5
No 20
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.1e-55 Score=494.27 Aligned_cols=286 Identities=22% Similarity=0.356 Sum_probs=251.9
Q ss_pred CCcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCC--C-CCCCCC-----------Ccccccccc---CCCCCCC-C
Q 012130 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIE--T-FDCTSF-----------PTKIAAEIK---SFSTDGW-V 224 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~--~-~~~~~~-----------~~~~~g~i~---~fd~~~f-i 224 (470)
.++||||||||++|+| +++++||++|.+|++++++++ + |+...+ +.+++++++ .||+.+| |
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 4689999999999999 999999999999999999985 3 553222 345566664 5999999 9
Q ss_pred CccccccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchh
Q 012130 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTN 304 (470)
Q Consensus 225 ~p~ea~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 304 (470)
+|+|++.|||+++|+++++|+||||||++++ ++++.++|||+|++.++|..... ....++++.+++...+
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~~~~~~~~-------~~~~~~~~~~~g~~~~ 154 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGIDPH---SLRGTATGVFLGVAKFGYGEDTA-------AAEDVEGYSVTGVAPA 154 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGG---GGTTBCCEEEEECCCCCTTTTCC----------CTTCHHHHTTCHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEecCchHHhhhc-------cccccccccccccccc
Confidence 9999999999999999999999999999986 77889999999999887754321 1234577778888899
Q ss_pred hHHHHHHHHhCCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCc
Q 012130 305 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (470)
Q Consensus 305 ~~a~~is~~~gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~r 384 (470)
+++++|++.|||+||+++|+++|+||++||++||++|++|+||+|||||+|.+++|..+..|..+++|+ +++.||
T Consensus 155 ~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-----~~g~~~ 229 (915)
T 2qo3_A 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-----ADGRSK 229 (915)
T ss_dssp HHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-----SSCCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-----CCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred CCCCCCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCC--CCcCcCchhHHHHHhhc-------cccEE
Q 012130 385 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM--TEPHPDGKSAMSLRLNF-------SVQMK 455 (470)
Q Consensus 385 pFd~~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~--t~P~p~g~~~~~~~~~~-------~i~~v 455 (470)
|||.++|||++|||+|+||||++++|+++|++||++|+|+++|+||++. +.|++.+|..++.+++. +|+||
T Consensus 230 ~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~v 309 (915)
T 2qo3_A 230 AFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAV 309 (915)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred cccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 9999999999999999999999999999999999999999999999864 55565666666555442 99999
Q ss_pred EEeeeccee
Q 012130 456 SLNGFGKFY 464 (470)
Q Consensus 456 eahGtGT~l 464 (470)
|+|||||.+
T Consensus 310 e~HgtgT~~ 318 (915)
T 2qo3_A 310 EAHGTGTAL 318 (915)
T ss_dssp ECCCCCCTT
T ss_pred EecCCCCcc
Confidence 999999986
No 21
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.8e-55 Score=491.68 Aligned_cols=286 Identities=23% Similarity=0.343 Sum_probs=250.7
Q ss_pred CCcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCC--C-CCCCCCCcccccccc---CCCCCCC-CCccccccCCHH
Q 012130 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIE--T-FDCTSFPTKIAAEIK---SFSTDGW-VAPKLSKRMDKF 235 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~--~-~~~~~~~~~~~g~i~---~fd~~~f-i~p~ea~~mdp~ 235 (470)
.++||||||||++|+| .++++||++|.+|++++++++ | |+. ....+++++++ .||+.+| |+|+|++.||||
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~ 116 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQ 116 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHH
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHH
Confidence 4689999999999987 789999999999999999885 3 432 22345666664 6999999 999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
++|+++++|+||||||++++ ++++.+||||+|++.++|..... .....++++.+++...++++++|++.||
T Consensus 117 ~rl~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~d~~~~~~------~~~~~~~~~~~~g~~~~~~a~ris~~lg 187 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPV---SLRGSATGVFTGVGTVDYGPRPD------EAPDEVLGYVGTGTASSVASGRVAYCLG 187 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGG---GGTTSCEEEEEEECCCCCSCCTT------SSCGGGGGGHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEeCCchhhhhhh------cCccccCcccccccccchHHHHHHHhcC
Confidence 99999999999999999986 77889999999999877653211 1223456666777888999999999999
Q ss_pred CCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCccee
Q 012130 316 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 395 (470)
Q Consensus 316 l~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~ 395 (470)
|+||+++|+++|+||++||++||++|++|+||+|||||+|.+++|..+..|..+++|+ |++.|||||.++|||++
T Consensus 188 l~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls-----~~g~~~pFd~~adG~~~ 262 (917)
T 2hg4_A 188 LEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFGL 262 (917)
T ss_dssp CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC-----TTSCCCTTBTTCCCBCB
T ss_pred CCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC-----CccccCcccccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred cceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCC--CCCcCcCchhHHHHHhh-------ccccEEEEeeeccee
Q 012130 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH--MTEPHPDGKSAMSLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 396 GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~--~t~P~p~g~~~~~~~~~-------~~i~~veahGtGT~l 464 (470)
|||+|+||||++++|+++|++||++|+|+++|+||++ ++.|++.+|..++.+++ .+|+|||+|||||.+
T Consensus 263 gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~ 340 (917)
T 2hg4_A 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRL 340 (917)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTT
T ss_pred cceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCcc
Confidence 9999999999999999999999999999999999986 45566566655555444 299999999999975
No 22
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=100.00 E-value=1e-48 Score=456.58 Aligned_cols=319 Identities=22% Similarity=0.261 Sum_probs=255.9
Q ss_pred hhhhhhhhhhccccccCCCCceEeeCCCCChHHHHHHHhhhhhhhhccccccccccCCCCccccccCCCCCCCCcEEEEe
Q 012130 92 EPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTG 171 (470)
Q Consensus 92 el~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaItG 171 (470)
+++|++...+|++ + +.+.+||| |+|..+. +...........+... ..... ..-+....++|.|+.
T Consensus 1067 ~~~~~i~~~tgir-~----~~~~~fd~-~~p~~~~-------~~~~~~~~~~~~~~~~-~~~~a-~~~~~~~~~~~~i~~ 1131 (1878)
T 2uv9_A 1067 KYEKYILEHSGIR-L----IEPELFGG-YDPNRKQ-------LLQEVVIEQDLEPFEA-SKEQA-EEFKREHGDKVEIFE 1131 (1878)
T ss_dssp HHHHHHHHTSEEE-E----CCGGGGTT-CCGGGEE-------EEEEEECCSCCCCEEE-CHHHH-HHHHHHHGGGEEEEE
T ss_pred HHHHHHHHhcCCC-C----CcccccCC-CCHHHHH-------HHHHhhcccCCCcccc-Chhhh-hhccccCCCCeeEee
Confidence 6799999999999 7 77789999 8885542 1111111111000000 00000 000011246788873
Q ss_pred ecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCcccccccc-CCCCCCC-CCccccccCCHHHHHHHHHHHHHHHh
Q 012130 172 MGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALAD 249 (470)
Q Consensus 172 mg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~-~fd~~~f-i~p~ea~~mdp~~rl~L~aa~eALed 249 (470)
..+.++||++|.+|++++.+.. ..++..++|.|+ +||+.+| |++++++.|||+++|+|+++++||+|
T Consensus 1132 -------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~ 1200 (1878)
T 2uv9_A 1132 -------IPETGQYTVRLRKGATLLIPKA----LQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLS 1200 (1878)
T ss_dssp -------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred -------CCChHHHHHHHHcCCCeeeecC----CCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3567899999999999999852 346678899997 7999999 99999999999999999999999999
Q ss_pred CCCC-ccc-ccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHH-HhCCCCcceeecCC
Q 012130 250 GGIT-EDV-MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTA 326 (470)
Q Consensus 250 AG~~-~~~-~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~-~~gl~Gps~tV~tA 326 (470)
|||+ +.. .+.++..++|||+|++.+++..+...+...... ..+.++.++....|+++++|++ +||++||+++|++|
T Consensus 1201 AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~-~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tA 1279 (1878)
T 2uv9_A 1201 SGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLD-KPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGA 1279 (1878)
T ss_dssp TTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTT-CCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCG
T ss_pred CCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhc-CCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCc
Confidence 9997 541 112678899999999999987766555432211 3367788888899999999999 59999999999999
Q ss_pred CchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC------CCCCCCCCcCCCCCCCcceecceeE
Q 012130 327 CATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGEGAG 400 (470)
Q Consensus 327 CsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~------~~~~~~~~rpFd~~adG~v~GEGag 400 (470)
|+||++||+.||+.|++|+||+|||||+|. +++..+..|..+++++.. +.+|++.|||||.++|||++|||||
T Consensus 1280 CASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag 1358 (1878)
T 2uv9_A 1280 CATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCG 1358 (1878)
T ss_dssp GGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEE
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeE
Confidence 999999999999999999999999999998 789999999999999842 4468999999999999999999999
Q ss_pred eEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCc
Q 012130 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHP 438 (470)
Q Consensus 401 alvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p 438 (470)
++||+++++|+++|++|||+|+|+++|+|+.+.+.|.|
T Consensus 1359 ~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paP 1396 (1878)
T 2uv9_A 1359 VQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAP 1396 (1878)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCC
T ss_pred EEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCC
Confidence 99999999999999999999999999999987666665
No 23
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=100.00 E-value=3e-48 Score=453.55 Aligned_cols=319 Identities=21% Similarity=0.266 Sum_probs=253.6
Q ss_pred hhhhhhhhhhhccccccCCCCceEeeCCCCChHHHHHHHhhhhhhhh-ccccccccccCCCCccccccCCCCCCCCcEEE
Q 012130 91 FEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRV-TRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVV 169 (470)
Q Consensus 91 vel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaI 169 (470)
.+++|++...+|++ + +.+.+||+ ++|... .. +... +.....+... ..+.+.. -.....++|+|
T Consensus 1091 ~~~~~~i~~~tgir-~----~~~~~fd~-~~p~~~----~~--l~~~~~~~~~~~~~~---~~~~a~~-~~~~~~~~~~I 1154 (1887)
T 2uv8_A 1091 AKYETSILEHSGIR-L----IEPELFNG-YNPEKK----EM--IQEVIVEEDLEPFEA---SKETAEQ-FKHQHGDKVDI 1154 (1887)
T ss_dssp HHHHHHHHHTSSEE-E----CCGGGGTT-CCTTSE----EE--EEEEECSSCCCCEEE---CHHHHHH-HHHHHGGGEEE
T ss_pred HHHHHHHHHhcCCC-C----CCcccCCC-CCHHHH----HH--HHHHHhccccccccc---Cccchhh-HhhcCCCceeE
Confidence 36799999999999 7 77789999 888431 11 1110 0100000000 0000000 00112467888
Q ss_pred EeecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCcccccccc-CCCCCCC-CCccccccCCHHHHHHHHHHHHHH
Q 012130 170 TGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKAL 247 (470)
Q Consensus 170 tGmg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~-~fd~~~f-i~p~ea~~mdp~~rl~L~aa~eAL 247 (470)
+++ .+.++||++|.+|++++.+.. ..++..++|.|+ +||+.+| |++++++.|||+++|+|+++++||
T Consensus 1155 ~~~-------~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL 1223 (1887)
T 2uv8_A 1155 FEI-------PETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAF 1223 (1887)
T ss_dssp EEC-------TTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred eec-------CchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 852 467899999999999999863 246678899997 7999999 999999999999999999999999
Q ss_pred HhCCCC-ccc-ccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH-hCCCCcceeec
Q 012130 248 ADGGIT-EDV-MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-LGWMGPNYSIS 324 (470)
Q Consensus 248 edAG~~-~~~-~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~-~gl~Gps~tV~ 324 (470)
+||||. +.. ...++..++|||+|++.+++......+...... ..+.++.++....|+++++|++. ||++||+++|+
T Consensus 1224 ~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~-~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv~ 1302 (1887)
T 2uv8_A 1224 IASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKD-EPVQNDILQESFINTMSAWVNMLLISSSGPIKTPV 1302 (1887)
T ss_dssp HHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTT-CCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCCCCC
T ss_pred HHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhc-CCCCcchhhcchhhHHHHHHHHHHcCCccceEEee
Confidence 999995 541 112678899999999999987766554432211 23567777778889999999994 99999999999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC------CCCCCCCCcCCCCCCCcceecce
Q 012130 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGEG 398 (470)
Q Consensus 325 tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~------~~~~~~~~rpFd~~adG~v~GEG 398 (470)
+||+||++||+.||+.|++|+||+|||||+|. ++|..+..|..+++++.. +.+|++.|||||.+++||++|||
T Consensus 1303 tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gEG 1381 (1887)
T 2uv8_A 1303 GACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQG 1381 (1887)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBCE
T ss_pred cccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCcccccc
Confidence 99999999999999999999999999999998 789999999999999842 34588999999999999999999
Q ss_pred eEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCc
Q 012130 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHP 438 (470)
Q Consensus 399 agalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p 438 (470)
||++||+++++|+++|++|||+|+|+++|+|+.+.+.|.|
T Consensus 1382 ag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paP 1421 (1887)
T 2uv8_A 1382 AGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP 1421 (1887)
T ss_dssp EEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCC
T ss_pred eEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCC
Confidence 9999999999999999999999999999999987665555
No 24
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-49 Score=445.20 Aligned_cols=319 Identities=21% Similarity=0.260 Sum_probs=249.2
Q ss_pred hhhhhhhhhhccccccCCCCceEeeCCCCChHHHHHHHhhhhhhhhccccccccccCCCCccccccCCCCCCCCcEEEEe
Q 012130 92 EPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTG 171 (470)
Q Consensus 92 el~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaItG 171 (470)
+++|++...+|++ + +.+.+||+ ++|... .. +..... .....+...+. ..+.. -+....++|+|++
T Consensus 893 ~~~~~i~~~tGiR-l----~~~~~fd~-~~p~~~----~~--L~e~~l-~~d~~~~~~s~-~~a~~-~~~~~~d~v~I~~ 957 (1688)
T 2pff_A 893 KYETSILEHSGIR-L----IEPELFNG-YNPEKK----EM--IQEVIV-EEDLEPFEASK-ETAEQ-FKHQHGDKVDIFE 957 (1688)
T ss_dssp TSSSSSSSGGGTT-T----SSSSCCSS-SSSSCC----SS--SEECCC-CCCCSCCCCCC-CCTTH-HHHHHHHSCTTSC
T ss_pred HHHHHHHHhcCCC-C----CCCccCCC-CCHHHH----hH--hhHHhc-CCCCcccccCh-hhhhh-ccccCCCCeEEec
Confidence 5689999999999 7 77789999 888431 11 111000 00000000000 00000 0000123454442
Q ss_pred ecccCCCCCCHHHHHHHHHcCCCcceeCCCCCCCCCCcccccccc-CCCCCCC-CCccccccCCHHHHHHHHHHHHHHHh
Q 012130 172 MGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALAD 249 (470)
Q Consensus 172 mg~~~P~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~-~fd~~~f-i~p~ea~~mdp~~rl~L~aa~eALed 249 (470)
-.+.++||++|.+|++++.+. ...++..++|.++ +||+.+| |++++++.|||+++|+++++++||+|
T Consensus 958 -------i~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALed 1026 (1688)
T 2pff_A 958 -------IPETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIA 1026 (1688)
T ss_dssp -------CCCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTT
T ss_pred -------CCCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHH
Confidence 246789999999999999883 3356678889997 7999999 99999999999999999999999999
Q ss_pred CCCC-ccc-ccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHH-HhCCCCcceeecCC
Q 012130 250 GGIT-EDV-MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTA 326 (470)
Q Consensus 250 AG~~-~~~-~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~-~~gl~Gps~tV~tA 326 (470)
|||+ +.. ...++..++|||+|++.+++......+..... ...+.++.++....|.++++|++ +||++||+++|++|
T Consensus 1027 AGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~-~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtA 1105 (1688)
T 2pff_A 1027 SGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGA 1105 (1688)
T ss_dssp TTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSS-CCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCT
T ss_pred cCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHh-cCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCC
Confidence 9997 541 11267889999999999998876665442211 12356777777888999999999 79999999999999
Q ss_pred CchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC------CCCCCCCCcCCCCCCCcceecceeE
Q 012130 327 CATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGEGAG 400 (470)
Q Consensus 327 CsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~------~~~~~~~~rpFd~~adG~v~GEGag 400 (470)
||||++||+.||++|++|+||+|||||+|. +++..+..|..+++++.. +.+|++.|||||.+++||++|||||
T Consensus 1106 CASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAG 1184 (1688)
T 2pff_A 1106 CATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAG 1184 (1688)
T ss_dssp TTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCE
T ss_pred CchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceE
Confidence 999999999999999999999999999998 688889999999999853 3458999999999999999999999
Q ss_pred eEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCc
Q 012130 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHP 438 (470)
Q Consensus 401 alvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p 438 (470)
++||+++++|+++|++|||+|+|+++++|+.+.+.|.|
T Consensus 1185 avVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAP 1222 (1688)
T 2pff_A 1185 IQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP 1222 (1688)
T ss_dssp EEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCC
T ss_pred EEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCC
Confidence 99999999999999999999999999999986655444
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=100.00 E-value=3.3e-43 Score=428.56 Aligned_cols=256 Identities=23% Similarity=0.325 Sum_probs=221.6
Q ss_pred CCcccccccc-CCCCCCC-CCccccccCCHHHHHHHHHHHHHHHhCCCCccccc-ccCCCeeEEEEeccCCchhhHHHHH
Q 012130 207 FPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAI 283 (470)
Q Consensus 207 ~~~~~~g~i~-~fd~~~f-i~p~ea~~mdp~~rl~L~aa~eALedAG~~~~~~~-~~~~~rvGV~vG~~~g~~~~~~~~~ 283 (470)
++.+++|+++ +||+.+| |++++++.|||+++|+++++++||+||||+++.+. ..++.++|||+|++.+++....+.+
T Consensus 2617 ~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~ 2696 (3089)
T 3zen_D 2617 LSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMY 2696 (3089)
T ss_dssp CSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHH
T ss_pred ccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHH
Confidence 4677889994 7999999 99999999999999999999999999999986332 2367899999999999988877766
Q ss_pred HHHHhhhhcCCCccccccchhhHHHHHHH-HhCCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhh
Q 012130 284 EALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG 362 (470)
Q Consensus 284 ~~~~~~~~~~~p~~~~~~~~~~~a~~is~-~~gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~ 362 (470)
..+..+....++ .++..+.|+.++++++ +||++||+++|+++||||++||++||++|++|+||+|||||+|. +++..
T Consensus 2697 ~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~ 2774 (3089)
T 3zen_D 2697 HGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEA 2774 (3089)
T ss_dssp HHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHH
T ss_pred HHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHH
Confidence 655443333333 3566778899999997 45999999999999999999999999999999999999999999 89999
Q ss_pred hHHhhhcccccC------CCCCCCCCCcCCCCCCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCc
Q 012130 363 LGGFVACRALSQ------RNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 436 (470)
Q Consensus 363 ~~~f~~~~~Ls~------~~~~~~~~~rpFd~~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P 436 (470)
+.+|..+++|+. .+.+|++.|||||+++|||++|||+|++|||++++|+++|++||++|.|+++|+||++++.|
T Consensus 2775 ~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~ 2854 (3089)
T 3zen_D 2775 IIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIP 2854 (3089)
T ss_dssp HHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSS
T ss_pred HHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCcc
Confidence 999999999873 35678999999999999999999999999999999999999999999999999999987777
Q ss_pred CcC---------chhHHHHHhh-------ccccEEEEeeeccee
Q 012130 437 HPD---------GKSAMSLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 437 ~p~---------g~~~~~~~~~-------~~i~~veahGtGT~l 464 (470)
.|. +|..++.+++ .+|+|||+|||||.+
T Consensus 2855 aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~l 2898 (3089)
T 3zen_D 2855 APGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLA 2898 (3089)
T ss_dssp CCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTT
T ss_pred CCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCccc
Confidence 764 4544544443 299999999999975
No 26
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=99.92 E-value=3.2e-25 Score=228.84 Aligned_cols=195 Identities=16% Similarity=0.161 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 235 FMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 235 ~~rl~L~aa~eALedA-G~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
.++|+++++++||+|+ |++++ +++ +|++|+..+++. ..+.++.+|++.
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~---~id----~v~~g~~~~~~~------------------------~~~~~a~~ia~~ 78 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPG---EVE----DVIWGCVNQTLE------------------------QGWNIARMASLM 78 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGG---GEE----EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCHH---HCC----EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence 4689999999999999 99876 333 799998754321 124578999999
Q ss_pred hCC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hhhhHHh-h------------hccc------
Q 012130 314 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGLGGF-V------------ACRA------ 371 (470)
Q Consensus 314 ~gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~-p~~~~~f-~------------~~~~------ 371 (470)
||+ +||+++|+++|+|+++||++|+++|++|+||++||||+|.+.. |.....| . .+++
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLG 158 (390)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHH
T ss_pred cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHH
Confidence 999 8999999999999999999999999999999999999997632 3321111 0 0122
Q ss_pred ----ccCC----------------------CCC--C------CCCCcCCCCC---------------------CCcce--
Q 012130 372 ----LSQR----------------------NND--P------TKASRPWDIN---------------------RDGFV-- 394 (470)
Q Consensus 372 ----Ls~~----------------------~~~--~------~~~~rpFd~~---------------------adG~v-- 394 (470)
+++. +++ | .+.|+|||.+ +||++
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~ 238 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEec
Confidence 2211 000 2 1233799999 89999
Q ss_pred -----ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh-------ccccEEEEeeecc
Q 012130 395 -----MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN-------FSVQMKSLNGFGK 462 (470)
Q Consensus 395 -----~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~-------~~i~~veahGtGT 462 (470)
++||+++|||+++++|+++|++||++|+|++.+++... +...++...+.+++ .+|+|+|+|++.|
T Consensus 239 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~---~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~ 315 (390)
T 1wdk_C 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPA---IMGYGPVPATQKALKRAGLNMADIDFIELNEAFA 315 (390)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG---GGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH
T ss_pred hhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChh---hcchhHHHHHHHHHHHcCCChhhCcEEEeccCCH
Confidence 99999999999999999999999999999999986421 12234444433333 2999999999987
Q ss_pred e
Q 012130 463 F 463 (470)
Q Consensus 463 ~ 463 (470)
+
T Consensus 316 ~ 316 (390)
T 1wdk_C 316 A 316 (390)
T ss_dssp H
T ss_pred H
Confidence 5
No 27
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=99.91 E-value=5.3e-24 Score=220.21 Aligned_cols=191 Identities=18% Similarity=0.205 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
++|+++++++||+|||++++ +++ +|++|+..+++. ...++.++++.||
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~---~id----~v~~g~~~~~~~-------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPE---DVS----EVIFGHVLAAGC-------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCCCCC-------------------------CCHHHHHHHHHcC
Confidence 67999999999999999876 333 689998754321 1246889999999
Q ss_pred C--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hhhh--------------H-----H----h--h
Q 012130 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGL--------------G-----G----F--V 367 (470)
Q Consensus 316 l--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~-p~~~--------------~-----~----f--~ 367 (470)
+ +||+++|+++|+|++.||++|+++|++|+||++||||+|.+.. |... . + | .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 8999999999999999999999999999999999999998653 2210 0 0 0 1
Q ss_pred hcccccC---------------------------------------------------CCCCCCC---------CCcC-C
Q 012130 368 ACRALSQ---------------------------------------------------RNNDPTK---------ASRP-W 386 (470)
Q Consensus 368 ~~~~Ls~---------------------------------------------------~~~~~~~---------~~rp-F 386 (470)
.++.++. ..+.+.. .||| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 1222210 0111111 5999 9
Q ss_pred CCCCCcce-------ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcC--chhHHHHHhh-------c
Q 012130 387 DINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD--GKSAMSLRLN-------F 450 (470)
Q Consensus 387 d~~adG~v-------~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~--g~~~~~~~~~-------~ 450 (470)
|.++||++ ++||+++|||+++++|+++|++||++|+|++.+++ .|++. ++...+.+++ .
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999999984 35443 4433333332 2
Q ss_pred cccEEEEeeecce
Q 012130 451 SVQMKSLNGFGKF 463 (470)
Q Consensus 451 ~i~~veahGtGT~ 463 (470)
+|+|+|+|-.-++
T Consensus 314 dId~ie~~d~f~~ 326 (397)
T 1wl4_A 314 DVDIFEINEAFAA 326 (397)
T ss_dssp GCCEEEECCSBHH
T ss_pred HCCEEEEecccHH
Confidence 9999999987664
No 28
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=99.90 E-value=1.3e-23 Score=217.08 Aligned_cols=192 Identities=13% Similarity=0.104 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHhCC----CCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHH
Q 012130 236 MLYLLTAGKKALADGG----ITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (470)
Q Consensus 236 ~rl~L~aa~eALedAG----~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is 311 (470)
++|+++++++||+|+| ++++ +++ +|++|+..+++ ..+..+.+++
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~---~id----~v~~g~~~~~~-------------------------~~~~~a~~va 83 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLN---LIE----EVACGNVLNVG-------------------------AGATEHRAAC 83 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGG---GCC----CEEEECSSSBG-------------------------GGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHH---HCC----EEEEEecCCCC-------------------------CCChHHHHHH
Confidence 5699999999999999 9876 344 59999875432 1245688999
Q ss_pred HHhCC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hhh-----------h--HHh-----hhcc
Q 012130 312 MDLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG-----------L--GGF-----VACR 370 (470)
Q Consensus 312 ~~~gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~-p~~-----------~--~~f-----~~~~ 370 (470)
+.+|+ +||+++|+++|+|+++||++|+++|++|++|++||||+|.+.. |.. + .+| ..++
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG 163 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence 99999 8999999999999999999999999999999999999997543 210 0 011 1112
Q ss_pred cccC---------------------C----C--------------------CCCCCC------------CcC-CCCCCCc
Q 012130 371 ALSQ---------------------R----N--------------------NDPTKA------------SRP-WDINRDG 392 (470)
Q Consensus 371 ~Ls~---------------------~----~--------------------~~~~~~------------~rp-Fd~~adG 392 (470)
.+++ . | .++|+. +|| ||.++ |
T Consensus 164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G 242 (393)
T 1afw_A 164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-G 242 (393)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----C
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-C
Confidence 1100 0 0 013443 456 98766 8
Q ss_pred ce-------ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh-------ccccEEEEe
Q 012130 393 FV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN-------FSVQMKSLN 458 (470)
Q Consensus 393 ~v-------~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~-------~~i~~veah 458 (470)
++ ++||+++|||+++++|+++|++||++|+|++.++|..+++ ..++...+.+++ .||+|+|+|
T Consensus 243 ~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~---~~~~~~a~~~al~~Agl~~~dId~ve~h 319 (393)
T 1afw_A 243 TTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIM---GVGPAYAIPKVLEATGLQVQDIDIFEIN 319 (393)
T ss_dssp CCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGG---GGHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred CeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhc---chhHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 88 7999999999999999999999999999999999853222 224433333332 299999999
Q ss_pred eecce
Q 012130 459 GFGKF 463 (470)
Q Consensus 459 GtGT~ 463 (470)
++.|.
T Consensus 320 ~~ft~ 324 (393)
T 1afw_A 320 EAFAA 324 (393)
T ss_dssp CSBHH
T ss_pred ccCHH
Confidence 99985
No 29
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=99.89 E-value=2e-22 Score=207.74 Aligned_cols=196 Identities=18% Similarity=0.147 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHH
Q 012130 234 KFMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (470)
Q Consensus 234 p~~rl~L~aa~eALedA-G~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~ 312 (470)
+.+.|+++++++||+|+ |++++ +++ +|++|+..+++. .....+.++++
T Consensus 26 ~~~~L~~~a~~~Al~~a~gi~~~---~Id----~v~~g~~~~~~~------------------------~~~~~a~~~~~ 74 (387)
T 3goa_A 26 RAEDLSAHLMRSLLARNPSLTAA---TLD----DIYWGCVQQTLE------------------------QGFNIARNAAL 74 (387)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCGG---GCC----EEEEECSCCSBT------------------------TTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCHH---HcC----EEEEEcccCCcc------------------------cccHHHHHHHH
Confidence 45779999999999999 99987 444 699998643211 01235788999
Q ss_pred HhCC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhh---------------------------
Q 012130 313 DLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL--------------------------- 363 (470)
Q Consensus 313 ~~gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~--------------------------- 363 (470)
.+|+ .+|+++|+++|+|+++||++|+++|++|+||.+||+|+|.+......
T Consensus 75 ~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 154 (387)
T 3goa_A 75 LAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEML 154 (387)
T ss_dssp HTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHH
T ss_pred HcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHH
Confidence 9999 68999999999999999999999999999999999999976543211
Q ss_pred -----------HHhh---h--------cccccCC--------------CCCCCCCCcC-------------CCC------
Q 012130 364 -----------GGFV---A--------CRALSQR--------------NNDPTKASRP-------------WDI------ 388 (470)
Q Consensus 364 -----------~~f~---~--------~~~Ls~~--------------~~~~~~~~rp-------------Fd~------ 388 (470)
..|. . .|.+... ..++++.+|+ |+.
T Consensus 155 ~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t 234 (387)
T 3goa_A 155 SRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234 (387)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence 0000 0 0011000 0124555555 765
Q ss_pred CCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh-------ccccEEEEeeec
Q 012130 389 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN-------FSVQMKSLNGFG 461 (470)
Q Consensus 389 ~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~-------~~i~~veahGtG 461 (470)
-.|+..++||++++||+++++|+++|++||++|+|++.++|+.+... .++..++.+++ .+|+|+|+|++.
T Consensus 235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~---~~~~~a~~~al~~agl~~~did~ve~h~~f 311 (387)
T 3goa_A 235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMG---YGPVPASKLALKKAGLSASDIDVFEMNEAF 311 (387)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTT---CTHHHHHHHHHHHHTCCGGGCSEEEECCSB
T ss_pred cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcch---HHHHHHHHHHHHHcCCCHHHcCEEEEeCcc
Confidence 25777899999999999999999999999999999999998754332 23333333332 299999999998
Q ss_pred ce
Q 012130 462 KF 463 (470)
Q Consensus 462 T~ 463 (470)
|+
T Consensus 312 ~~ 313 (387)
T 3goa_A 312 AA 313 (387)
T ss_dssp HH
T ss_pred hH
Confidence 85
No 30
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=99.89 E-value=1.3e-22 Score=211.23 Aligned_cols=191 Identities=15% Similarity=0.156 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
.++|+++++++||+|||++++ +++ +||+|+..+++. ....+..+++.+
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~---~id----~v~~g~~~~~~~-------------------------~~~~a~~~a~~l 102 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPE---QLG----DICVGNVLQPGA-------------------------GAIMARIAQFLS 102 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----CEEEECSSSBGG-------------------------GHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCCccc-------------------------cccHHHHHHHHc
Confidence 467999999999999999876 444 699998754331 123466788899
Q ss_pred CC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhh---------h------------HHhh----
Q 012130 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------L------------GGFV---- 367 (470)
Q Consensus 315 gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~---------~------------~~f~---- 367 (470)
|+ ++|+++|+++|+|+++||+.|+++|++|+||.+||||+|.+..... + .++.
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 7999999999999999999999999999999999999998654210 0 0110
Q ss_pred --------------------------hcccccCC------------------CCCCCCCCcC-------------CCCCC
Q 012130 368 --------------------------ACRALSQR------------------NNDPTKASRP-------------WDINR 390 (470)
Q Consensus 368 --------------------------~~~~Ls~~------------------~~~~~~~~rp-------------Fd~~a 390 (470)
..+.+... -.++++.||| ||.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 01111100 0124779999 99886
Q ss_pred -----CcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcC--chhHHHHHhh-------ccccEEE
Q 012130 391 -----DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD--GKSAMSLRLN-------FSVQMKS 456 (470)
Q Consensus 391 -----dG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~--g~~~~~~~~~-------~~i~~ve 456 (470)
||++++||+++|||++++.|+++|++|+++|+|++.+++ .|+.. ++..++.+++ .+|+|+|
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999999864 34333 3333333332 2999999
Q ss_pred Eeeecc
Q 012130 457 LNGFGK 462 (470)
Q Consensus 457 ahGtGT 462 (470)
+|++.|
T Consensus 338 ~h~af~ 343 (418)
T 2iik_A 338 INEAFA 343 (418)
T ss_dssp ECCSBH
T ss_pred eeccch
Confidence 998654
No 31
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=99.89 E-value=6.1e-23 Score=211.86 Aligned_cols=191 Identities=17% Similarity=0.192 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
.++|+++++++||+|+|++++ +++ ++++|+..+++. ...++.++++.+
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~---~id----~~~~g~~~~~~~-------------------------~~~~a~~ia~~l 74 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAG---EVN----EVILGQVLPAGE-------------------------GQNPARQAAMKA 74 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCTTS-------------------------CSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCCCCC-------------------------CcHHHHHHHHHc
Confidence 467999999999999999876 343 677887643211 124689999999
Q ss_pred CCC--CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hhh---h--------HHhh-------------
Q 012130 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG---L--------GGFV------------- 367 (470)
Q Consensus 315 gl~--Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~-p~~---~--------~~f~------------- 367 (470)
|++ ||+++|+++|+|++.||++|+++|++|+||++||||+|.+.. |.. . ..|.
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 998 999999999999999999999999999999999999998543 220 0 0011
Q ss_pred -hcccc----------cC----------------------CCC--------CCCCCCcCCCCC-----------------
Q 012130 368 -ACRAL----------SQ----------------------RNN--------DPTKASRPWDIN----------------- 389 (470)
Q Consensus 368 -~~~~L----------s~----------------------~~~--------~~~~~~rpFd~~----------------- 389 (470)
.++++ ++ .++ .++ .|+|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~-~~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRK-GDITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTT-CCEEECSCSSCCTTCCHHHHHTCCC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCC-CceeeccccccCCCCCHHHHhcCCC
Confidence 12222 10 000 012 28999998
Q ss_pred ---CCcce-------ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcC--chhHHHHHhh-------c
Q 012130 390 ---RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD--GKSAMSLRLN-------F 450 (470)
Q Consensus 390 ---adG~v-------~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~--g~~~~~~~~~-------~ 450 (470)
+||++ ++||++++||+++++|+++|++||++|+|++.+++. |++. ++...+.+++ .
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~agl~~~ 308 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVD-----PKVMGTGPIPASRKALERAGWKIG 308 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecC-----hhhcchhHHHHHHHHHHHcCCCHH
Confidence 88999 999999999999999999999999999999998753 4333 4433333332 2
Q ss_pred cccEEEEeeecce
Q 012130 451 SVQMKSLNGFGKF 463 (470)
Q Consensus 451 ~i~~veahGtGT~ 463 (470)
+|+|+|+|-.-++
T Consensus 309 dId~ie~~d~f~~ 321 (392)
T 2vu1_A 309 DLDLVEANEAFAA 321 (392)
T ss_dssp GCSEEEECCSBHH
T ss_pred HcCEEEeccccHH
Confidence 9999999975443
No 32
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=99.88 E-value=2.7e-22 Score=207.16 Aligned_cols=190 Identities=18% Similarity=0.200 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
.++|+++++++||+|+|++++ +++ ++++|+..+++ .....+.++++.|
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~---~id----~~~~g~~~~~~-------------------------~~~~~a~~va~~l 79 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKE---EVK----EAYMGNVLQGG-------------------------EGQAPTRQAVLGA 79 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeccCCC-------------------------CCchHHHHHHHHc
Confidence 357999999999999999876 333 57888764321 1123688999999
Q ss_pred CC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhh-------------------hHH--------
Q 012130 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGG-------- 365 (470)
Q Consensus 315 gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~-------------------~~~-------- 365 (470)
|+ +||+++|+++|+|+++||++|+++|++|+||++||||+|.+..... +..
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 8999999999999999999999999999999999999997543211 111
Q ss_pred ---------hhhcccccCC----------------------C-----------------CCCCCCCcC--CCC-------
Q 012130 366 ---------FVACRALSQR----------------------N-----------------NDPTKASRP--WDI------- 388 (470)
Q Consensus 366 ---------f~~~~~Ls~~----------------------~-----------------~~~~~~~rp--Fd~------- 388 (470)
..+.+ +++. . .+.|+.+|+ ||+
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 01111 0100 0 012233333 666
Q ss_pred --CCCcce-------ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCc--hhHHHHHhh-------c
Q 012130 389 --NRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDG--KSAMSLRLN-------F 450 (470)
Q Consensus 389 --~adG~v-------~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g--~~~~~~~~~-------~ 450 (470)
+++|++ ++||++++||+++++|+++|++||++|+|++.++ +.|++.+ +...+.+++ .
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 679999 9999999999999999999999999999999875 3444433 333333332 2
Q ss_pred cccEEEEeeecc
Q 012130 451 SVQMKSLNGFGK 462 (470)
Q Consensus 451 ~i~~veahGtGT 462 (470)
||+|+|.|-.-+
T Consensus 314 dId~ie~~D~f~ 325 (395)
T 2ib8_A 314 DIAMWEVNEAFS 325 (395)
T ss_dssp GEEEEEECCSBH
T ss_pred HcCEEEEccccH
Confidence 999999997544
No 33
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.88 E-value=2.4e-22 Score=208.11 Aligned_cols=192 Identities=18% Similarity=0.205 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
.+|+++++++||+|+|++++ +++ +|++|+..+++. ..+..+.+|++.||
T Consensus 27 ~~L~~~Aa~~Al~dAgl~~~---~id----~v~~g~~~~~~~------------------------~~~~~a~~va~~lG 75 (401)
T 1ulq_A 27 DDLLAHALSVLVDRSGVPKE---EVE----DVYAGCANQAGE------------------------DNRNVARMALLLAG 75 (401)
T ss_dssp HHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSCCSST------------------------TTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecccCCC------------------------CCChHHHHHHHHhC
Confidence 56999999999999999876 343 799998754321 01356899999999
Q ss_pred C--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hhhh------------------------HHhh-
Q 012130 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGL------------------------GGFV- 367 (470)
Q Consensus 316 l--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~-p~~~------------------------~~f~- 367 (470)
+ ++|+++|+++|+|+++||++|+++|++|+||.+||||+|.+.. |... .+|.
T Consensus 76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p 155 (401)
T 1ulq_A 76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQ 155 (401)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHH
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 7999999999999999999999999999999999999997654 3210 1221
Q ss_pred -h-----cccc---------------------cCC-----------C----------------CCCCC------------
Q 012130 368 -A-----CRAL---------------------SQR-----------N----------------NDPTK------------ 381 (470)
Q Consensus 368 -~-----~~~L---------------------s~~-----------~----------------~~~~~------------ 381 (470)
. +++. |+. . .++|+
T Consensus 156 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~ 235 (401)
T 1ulq_A 156 ALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLA 235 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHH
T ss_pred cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHh
Confidence 0 1110 000 0 01222
Q ss_pred CCcC-CCCCCCcce-------ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh----
Q 012130 382 ASRP-WDINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN---- 449 (470)
Q Consensus 382 ~~rp-Fd~~adG~v-------~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~---- 449 (470)
.+|| ||. ||++ ++||+++|||+++++|+++|+++|++|+|++.++|..+.+ +.++...+.+++
T Consensus 236 ~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~---~~~~~~a~~~al~~Ag 310 (401)
T 1ulq_A 236 ALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIM---GIGPVPATRKALERAG 310 (401)
T ss_dssp HSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGG---GGTHHHHHHHHHHHTT
T ss_pred hCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCcccc---chhHHHHHHHHHHHcC
Confidence 3567 875 7998 7999999999999999999999999999999999864322 234433333332
Q ss_pred ---ccccEEEEeeecce
Q 012130 450 ---FSVQMKSLNGFGKF 463 (470)
Q Consensus 450 ---~~i~~veahGtGT~ 463 (470)
.||+|+|+|.+.|+
T Consensus 311 l~~~dId~ie~heafa~ 327 (401)
T 1ulq_A 311 LSFSDLGLIELNEAFAA 327 (401)
T ss_dssp CCGGGCSEEEECCSBHH
T ss_pred CCHHHcCEEEEecchHH
Confidence 29999999998875
No 34
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=99.88 E-value=4.6e-22 Score=208.14 Aligned_cols=193 Identities=14% Similarity=0.165 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
.+|+++++++||+|||++++ +++ +||+|+..+++. ..+.++.++++.||
T Consensus 56 ~~La~~Aa~~AL~dAGl~~~---~Id----~vi~g~~~~~~~------------------------~~~~~a~~va~~lG 104 (442)
T 2wu9_A 56 DDLLAPVLRALIEKTNLNPS---EVG----DIVVGTVLAPGS------------------------QRASECRMAAFYAG 104 (442)
T ss_dssp HHHHHHHHHHHHHHHTCCGG---GCC----CEEEECCSSBHH------------------------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeecCccC------------------------CCChHHHHHHHHcC
Confidence 57999999999999999876 444 699998764431 11346889999999
Q ss_pred C--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hh---------hhH-Hhh-----hc--------
Q 012130 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI---------GLG-GFV-----AC-------- 369 (470)
Q Consensus 316 l--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~-p~---------~~~-~f~-----~~-------- 369 (470)
+ ++|+++|+++|+|+++||++|+++|++|+||++||||+|.+.. |. .+. +|. .+
T Consensus 105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~ 184 (442)
T 2wu9_A 105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVA 184 (442)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHH
T ss_pred CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHH
Confidence 9 8999999999999999999999999999999999999997643 21 000 110 01
Q ss_pred ---------------------------ccccCC---------C----------CCCCC------------CCcC-CCCCC
Q 012130 370 ---------------------------RALSQR---------N----------NDPTK------------ASRP-WDINR 390 (470)
Q Consensus 370 ---------------------------~~Ls~~---------~----------~~~~~------------~~rp-Fd~~a 390 (470)
+.+... . .+.|+ .+|| ||.
T Consensus 185 ~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~-- 262 (442)
T 2wu9_A 185 QRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK-- 262 (442)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--
Confidence 112110 0 00122 4456 875
Q ss_pred Ccce-------ecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh-------ccccEEE
Q 012130 391 DGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN-------FSVQMKS 456 (470)
Q Consensus 391 dG~v-------~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~-------~~i~~ve 456 (470)
||++ ++||+++|||++++.|+++|++|+++|+|++.++|...++ ..++..++.+++ .+|+|+|
T Consensus 263 ~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~---~~~~~~A~~~Al~~AGl~~~DId~iE 339 (442)
T 2wu9_A 263 DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIM---GIGPAVAIPAAVKAAGLELDDIDLFE 339 (442)
T ss_dssp TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGG---GGHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhc---chHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 7998 6999999999999999999999999999999999842222 224433333332 2999999
Q ss_pred Eeeeccee
Q 012130 457 LNGFGKFY 464 (470)
Q Consensus 457 ahGtGT~l 464 (470)
+|+++|..
T Consensus 340 ~h~aft~~ 347 (442)
T 2wu9_A 340 INEAFASQ 347 (442)
T ss_dssp ECCSBHHH
T ss_pred EeCCChHH
Confidence 99999963
No 35
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.87 E-value=1.5e-22 Score=202.65 Aligned_cols=217 Identities=13% Similarity=0.151 Sum_probs=149.6
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCcccc-ccCCHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDKFMLYLLTAG 243 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea-~~mdp~~rl~L~aa 243 (470)
++.|+|+|+..|.. .+.+++++.+. .+ +.| + ....| |..+.. ...++..+|+++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i-~~~~G----------i~~r~~~~~~~~~~~l~~~a~ 59 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--TS-----DEW----I-VTRTG----------IRERHIAAPNETVSTMGFEAA 59 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHH----H-HHHHC----------CCEEEECCTTCCHHHHHHHHH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--CC-----HHH----H-HHHhC----------ceEEEecCCCCCHHHHHHHHH
Confidence 58999999999998 57777775431 10 000 0 00000 222222 23467889999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-Cccee
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 322 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gps~t 322 (470)
++||+|+|++++ +++ +|++|+..+++ .....+.++++.||++ +|+++
T Consensus 60 ~~al~~ag~~~~---~id----~vi~g~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~ 107 (317)
T 1hnj_A 60 TRAIEMAGIEKD---QIG----LIVVATTSATH-------------------------AFPSAACQIQSMLGIKGCPAFD 107 (317)
T ss_dssp HHHHHHHTCCGG---GCC----EEEEECSCCSC-------------------------SSSCHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHcCCCHH---HCC----EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCCeEEe
Confidence 999999999876 333 78888864211 0124689999999998 99999
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|+++|+|++.||+.|+++|++|++|.+||+|+|.+ ++. +. |+...+|+++|||++++
T Consensus 108 v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~A~ 164 (317)
T 1hnj_A 108 VAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CD------------PTDRGTIIIFGDGAGAA 164 (317)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SC------------TTCHHHHTTBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh-ccc----------CC------------chhcccceeeccccEEE
Confidence 99999999999999999999999999999999972 221 11 22234599999999999
Q ss_pred eeccchhHHhcCCeeeEEEEE-EeeccCCCCCCCcC-----------cCch----------hHHHHHhh-------cccc
Q 012130 403 LLEELEHAKKRGAKIYAEFRG-GSFTSDAYHMTEPH-----------PDGK----------SAMSLRLN-------FSVQ 453 (470)
Q Consensus 403 vLe~l~~A~~~G~~I~a~I~G-~a~~~dg~~~t~P~-----------p~g~----------~~~~~~~~-------~~i~ 453 (470)
|||+.++ ..||+++.+ .+...|..+++.|+ ++|+ ...+..+. -+|+
T Consensus 165 vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did 239 (317)
T 1hnj_A 165 VLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLD 239 (317)
T ss_dssp EEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred EEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 9998753 458887765 33333444443321 3343 12222221 1899
Q ss_pred EEEEeeeccee
Q 012130 454 MKSLNGFGKFY 464 (470)
Q Consensus 454 ~veahGtGT~l 464 (470)
|+++|+|||.+
T Consensus 240 ~v~~H~~~~~~ 250 (317)
T 1hnj_A 240 WLVPHQANLRI 250 (317)
T ss_dssp EEEECCSCHHH
T ss_pred EEEEcCCCHHH
Confidence 99999999976
No 36
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=99.87 E-value=3.7e-21 Score=198.80 Aligned_cols=192 Identities=20% Similarity=0.227 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+++++++||+|+|++++ +++ +|++|+..+++ .....+.++++.+
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~---dId----~vi~g~~~~~~-------------------------~~~~~a~~v~~~l 78 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPD---MID----ESLLGGVLTAG-------------------------LGQNIARQIALGA 78 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG---GCC----EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeecCCC-------------------------CCchHHHHHHHHc
Confidence 356999999999999999987 444 78999864321 1123578999999
Q ss_pred CC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhH---------------------Hh-----
Q 012130 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG---------------------GF----- 366 (470)
Q Consensus 315 gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~---------------------~f----- 366 (470)
|+ .+|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+....... ++
T Consensus 79 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (396)
T 4dd5_A 79 GIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFN 158 (396)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTT
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 589999999999999999999999999999999999999865421110 00
Q ss_pred ----------------------------hh--------cccccCC-------------CCCCCCCCcC------------
Q 012130 367 ----------------------------VA--------CRALSQR-------------NNDPTKASRP------------ 385 (470)
Q Consensus 367 ----------------------------~~--------~~~Ls~~-------------~~~~~~~~rp------------ 385 (470)
++ .|.+... ..+++..+|+
T Consensus 159 ~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~ 238 (396)
T 4dd5_A 159 NYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRP 238 (396)
T ss_dssp TEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCC
Confidence 00 0000000 0124445543
Q ss_pred -CCC-----CCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcC--chhHHHHHhh-------c
Q 012130 386 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD--GKSAMSLRLN-------F 450 (470)
Q Consensus 386 -Fd~-----~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~--g~~~~~~~~~-------~ 450 (470)
|+. ..|...++||++++||+++++|+++|++||++|+|++++++. |++. ++...+.+++ .
T Consensus 239 v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~ 313 (396)
T 4dd5_A 239 AFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVD-----PKIMGYGPVPATKKALEAANMTIE 313 (396)
T ss_dssp SSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCC-----CCcccHHHHHHHHHHHHHcCCCHH
Confidence 542 246667899999999999999999999999999999999863 4433 3444443333 2
Q ss_pred cccEEEEeeecce
Q 012130 451 SVQMKSLNGFGKF 463 (470)
Q Consensus 451 ~i~~veahGtGT~ 463 (470)
+|+|||+|.+.++
T Consensus 314 dId~ve~~d~f~~ 326 (396)
T 4dd5_A 314 DIDLVEANEAFAA 326 (396)
T ss_dssp GCSEEEECCSBHH
T ss_pred HcCEEEecChHHH
Confidence 9999999998664
No 37
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.86 E-value=1.7e-22 Score=204.25 Aligned_cols=221 Identities=16% Similarity=0.146 Sum_probs=150.6
Q ss_pred CCCCcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccc-cCCHHHHHH
Q 012130 162 MKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSK-RMDKFMLYL 239 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~-~mdp~~rl~ 239 (470)
+.+.++.|+|+|+.+|.. .+.+++|+.+... +.|- . ...| |..+... ..++.++|+
T Consensus 7 ~~~~~~~I~gig~~~P~~~~~~~~~~~~~~~~-------~~~i----~-~~~G----------i~~R~~~~~~~~~~~la 64 (339)
T 1mzj_A 7 PERRFSRVLGVGSYRPRREVSNKEVCTWIDST-------EEWI----E-TRTG----------IRSRRIAEPDETIQVMG 64 (339)
T ss_dssp CCCCEEEEEEEEEECCSCEEEHHHHTTTSSCC-------HHHH----H-HHHC----------CSEEECCCTTCCHHHHH
T ss_pred CccCceEEEEEEEeCCCccccHHHHHHHhCCC-------HHHH----H-HhcC----------ceEEEEeCCCCCHHHHH
Confidence 345689999999999998 6788887654210 0000 0 0000 2222221 245688999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-C
Q 012130 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-G 318 (470)
Q Consensus 240 L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-G 318 (470)
++++++||+|+|++++ +++ +|++|+..+++ ..+ ..+.+|++.||++ +
T Consensus 65 ~~Aa~~al~~ag~~~~---~id----~vi~gt~~~~~--------------------~~p-----~~a~~v~~~lgl~~~ 112 (339)
T 1mzj_A 65 VAASRRALEHAGVDPA---EID----LVVVSTMTNFV--------------------HTP-----PLSVAIAHELGADNA 112 (339)
T ss_dssp HHHHHHHHHHHTCCGG---GCC----EEEEECSCCCC--------------------CSS-----CHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHcCCCHH---HCC----EEEEEecCCCC--------------------CCC-----hHHHHHHHHhCCCCc
Confidence 9999999999999876 333 78999875422 111 2578999999998 7
Q ss_pred cceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecce
Q 012130 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (470)
Q Consensus 319 ps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEG 398 (470)
|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+ ++. +. + +..++|+++|||
T Consensus 113 ~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~----------~~-----~-------~d~~~~~~~GdG 169 (339)
T 1mzj_A 113 GGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------ID-----L-------ADRSLSFLFGDG 169 (339)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------SC-----S-------SCTTTTTTBCEE
T ss_pred cEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------cC-----c-------cccccceEeccC
Confidence 999999999999999999999999999999999999973 332 11 1 124679999999
Q ss_pred eEeEeeccchhHHhcCCeeeEEE-EEEeeccCCCCCC--CcCc-------------Cc----------hhHHHHHhh---
Q 012130 399 AGVLLLEELEHAKKRGAKIYAEF-RGGSFTSDAYHMT--EPHP-------------DG----------KSAMSLRLN--- 449 (470)
Q Consensus 399 agalvLe~l~~A~~~G~~I~a~I-~G~a~~~dg~~~t--~P~p-------------~g----------~~~~~~~~~--- 449 (470)
++++|||+.+. +.|+++. .+.+...|..+++ .|++ +| +...+..+.
T Consensus 170 A~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~a 244 (339)
T 1mzj_A 170 AGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVA 244 (339)
T ss_dssp EEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999998653 4566542 3333333333332 1322 12 212222221
Q ss_pred ----ccccEEEEeeeccee
Q 012130 450 ----FSVQMKSLNGFGKFY 464 (470)
Q Consensus 450 ----~~i~~veahGtGT~l 464 (470)
-+|+|+++|+|||.+
T Consensus 245 gl~~~did~v~~H~~~~~~ 263 (339)
T 1mzj_A 245 GLTVGDLVAFVPHQANLRI 263 (339)
T ss_dssp TCCGGGCSEEEECCSCHHH
T ss_pred CCCHHHCCEEEECCCCHHH
Confidence 189999999999976
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.86 E-value=4.3e-22 Score=199.69 Aligned_cols=217 Identities=13% Similarity=0.137 Sum_probs=148.5
Q ss_pred EEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCcccc-ccCCHHHHHHHHHHH
Q 012130 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDKFMLYLLTAGK 244 (470)
Q Consensus 167 VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea-~~mdp~~rl~L~aa~ 244 (470)
+.|+|+|...|.. .+.+++++.+.. + +.| +. ...| |..+.. ..-++..+|++++++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~~--~-----~~~----i~-~~~G----------i~~r~~~~~~~~~~~la~~a~~ 59 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLDT--S-----DEW----IV-TRTG----------IKERRVAAEDEYTSDLAFKAVE 59 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSSC--C-----HHH----HH-HHTC----------CCEEEECCTTCCHHHHHHHHHH
T ss_pred cEEEEEEEECCCceecHHHHHHHhCC--C-----HHH----HH-HhcC----------ceEEeecCCCCCHHHHHHHHHH
Confidence 5799999999988 677777754311 0 000 00 0000 111111 113467899999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCCCcceeec
Q 012130 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 324 (470)
Q Consensus 245 eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~Gps~tV~ 324 (470)
+||+|+|++++ +++ +|++|+...++ .. ...+.+++..||+++|+++|+
T Consensus 60 ~al~~ag~~~~---~id----~vi~~~~~~~~--------------------~~-----~~~a~~v~~~lgl~~~~~~v~ 107 (322)
T 1ub7_A 60 DLLRRHPGALE---GVD----AVIVATNTPDA--------------------LF-----PDTAALVQARFGLKAFAYDLL 107 (322)
T ss_dssp HHHHHSTTTTT---TEE----EEEEECSSCSE--------------------EE-----SCHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHcCCCHH---HCC----EEEEEcCCCCC--------------------CC-----CcHHHHHHHHhCCCCEEEeeC
Confidence 99999999875 222 68888864211 11 125789999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeEee
Q 012130 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 404 (470)
Q Consensus 325 tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagalvL 404 (470)
++|+|++.||+.|+++|++|++|.+||+|+|. +++. ..||| .++|+++|||++++||
T Consensus 108 ~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~~---------------------~~~~d-~~~~~~~GdGA~A~vL 164 (322)
T 1ub7_A 108 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEA-LSKI---------------------IDWND-RATAVLFGDGGGAAVV 164 (322)
T ss_dssp CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGT---------------------SCTTC-HHHHTTBCCEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEEech-hccc---------------------cChhh-cccceeeccccEEEEE
Confidence 99999999999999999999999999999997 3321 12444 6689999999999999
Q ss_pred ccchhHHhcCCeeeEEE-EEEeeccCCCCCCC-----cCc---------Cc----------hhHHHHHhh-------ccc
Q 012130 405 EELEHAKKRGAKIYAEF-RGGSFTSDAYHMTE-----PHP---------DG----------KSAMSLRLN-------FSV 452 (470)
Q Consensus 405 e~l~~A~~~G~~I~a~I-~G~a~~~dg~~~t~-----P~p---------~g----------~~~~~~~~~-------~~i 452 (470)
++.++ +..|++++ .+.+...|..+++. |++ +| +...+.++. -+|
T Consensus 165 ~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~di 240 (322)
T 1ub7_A 165 GKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDI 240 (322)
T ss_dssp ECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred EecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 98754 45677765 44444444433332 433 22 222222221 199
Q ss_pred cEEEEeeeccee
Q 012130 453 QMKSLNGFGKFY 464 (470)
Q Consensus 453 ~~veahGtGT~l 464 (470)
+|+++|+|||.+
T Consensus 241 d~~~~H~~~~~~ 252 (322)
T 1ub7_A 241 RLFVPHQANLRI 252 (322)
T ss_dssp SEEEECCSCHHH
T ss_pred CEEEEcCCCHHH
Confidence 999999999876
No 39
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.85 E-value=1.3e-21 Score=194.70 Aligned_cols=214 Identities=15% Similarity=0.227 Sum_probs=148.8
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa~ 244 (470)
++.|+|+|+.+|.. .+.+++++.+. .+ +.| +. ...| |..+.....++..+|++++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i~-~~~G----------i~~r~~~~~~~~~~l~~~a~~ 59 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--TS-----DEW----IT-TRTG----------IKERRIAKEETITYMATQAAK 59 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHH----HH-HHHC----------CCEEEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--CC-----HHH----HH-HHhC----------ceeeeecCCCCHHHHHHHHHH
Confidence 48999999999998 57777765431 10 000 00 0000 111111111678899999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCCC-cceee
Q 012130 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 323 (470)
Q Consensus 245 eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G-ps~tV 323 (470)
+||+|+|++++ +++ +|++|+..+++ .. + ..+.++++.||++| |+++|
T Consensus 60 ~al~~ag~~~~---~id----~v~~~~~~~~~--------------------~~----~-~~a~~v~~~lgl~~~~~~~v 107 (309)
T 2ebd_A 60 EALREANLSPE---ELD----LIILATLTPQK--------------------RF----P-STACLVQAQLKAKGVYAFDI 107 (309)
T ss_dssp HHHHHHTCCGG---GCS----EEEEECSSCSS--------------------SS----S-CHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHcCCCHH---HCC----EEEEEcCCCCC--------------------CC----C-cHHHHHHHHhCCCCceEEec
Confidence 99999999876 333 79999875321 11 1 25889999999999 99999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeEe
Q 012130 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (470)
Q Consensus 324 ~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagalv 403 (470)
+++|+|++.||+.|+++|++|++|.+||+|+|.+. +. + . |+...+|+++|||++++|
T Consensus 108 ~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~-----------~-~~~~~~~~~~gdGaaA~v 164 (309)
T 2ebd_A 108 SAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLS-EA----------V-----------D-WEDRSTCVLFGDGAGAVV 164 (309)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GT----------C-----------C-TTCTTTTTTBCEEEEEEE
T ss_pred CccchHHHHHHHHHHHHHHCCCCCEEEEEEecccc-cc----------c-----------C-ccchhhccccccccEEEE
Confidence 99999999999999999999999999999999732 11 1 1 233568999999999999
Q ss_pred eccchhHHhcCCeeeEEEEEEeeccCCC---CCCCc-----CcCch----------hHHHHHhh-------ccccEEEEe
Q 012130 404 LEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEP-----HPDGK----------SAMSLRLN-------FSVQMKSLN 458 (470)
Q Consensus 404 Le~l~~A~~~G~~I~a~I~G~a~~~dg~---~~t~P-----~p~g~----------~~~~~~~~-------~~i~~veah 458 (470)
|++.+++ ..|+++ ..++||. +++.| +++|+ ...+..+. .+|+|+++|
T Consensus 165 L~~~~~~----~~i~~~----~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 165 VTRSEDK----SDILAT----RMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp EEECSSS----CEEEEE----EEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred EEecCCC----CceeEE----EEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 9987654 235554 3455663 56666 44443 11222211 299999999
Q ss_pred eeccee
Q 012130 459 GFGKFY 464 (470)
Q Consensus 459 GtGT~l 464 (470)
++||.+
T Consensus 237 ~~~~~~ 242 (309)
T 2ebd_A 237 QANVRI 242 (309)
T ss_dssp CSCHHH
T ss_pred CCCHHH
Confidence 999975
No 40
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=99.85 E-value=1e-20 Score=195.34 Aligned_cols=191 Identities=19% Similarity=0.234 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+++++++||+|+|++++ +++ +|++|+...++ .....+.+++..+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~---~Id----~v~~g~~~~~~-------------------------~~~~~a~~i~~~l 76 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPH---EVD----EVILGHCIQRT-------------------------DEANTARTAALAA 76 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG---GCC----EEEEECSSCCG-------------------------GGCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHh---HCC----EEEEEEccCCC-------------------------ccchHHHHHHHHc
Confidence 356999999999999999987 444 68998764321 1123578899999
Q ss_pred CC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhH--------------------H-------
Q 012130 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG--------------------G------- 365 (470)
Q Consensus 315 gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~--------------------~------- 365 (470)
|+ ++|+++|+++|+|+++||++|+++|++|+||.+||+|+|.+....... +
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 589999999999999999999999999999999999999865422100 0
Q ss_pred ----h----------------------hhc--------ccccC---------C----CCCCCCCCcC-------------
Q 012130 366 ----F----------------------VAC--------RALSQ---------R----NNDPTKASRP------------- 385 (470)
Q Consensus 366 ----f----------------------~~~--------~~Ls~---------~----~~~~~~~~rp------------- 385 (470)
. +.. |.+.. . -.+|++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 0 000 00000 0 0136777775
Q ss_pred CCCC-----CCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCc--hhHHHHHhh-------cc
Q 012130 386 WDIN-----RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDG--KSAMSLRLN-------FS 451 (470)
Q Consensus 386 Fd~~-----adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g--~~~~~~~~~-------~~ 451 (470)
||.+ .|+..++||++++||+++++|+++|++|+++|+|++++++ .|++.+ +..++.+++ .+
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 7643 5777789999999999999999999999999999999873 344433 433333332 29
Q ss_pred ccEEEEeeecc
Q 012130 452 VQMKSLNGFGK 462 (470)
Q Consensus 452 i~~veahGtGT 462 (470)
|+|+|+|..-+
T Consensus 312 Id~ve~~d~fa 322 (394)
T 3ss6_A 312 ADLLEINEAFA 322 (394)
T ss_dssp CSEEEECCSBH
T ss_pred cCEEEeCCchH
Confidence 99999998743
No 41
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=99.83 E-value=1.4e-19 Score=186.86 Aligned_cols=193 Identities=18% Similarity=0.218 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+++++++||+|+|++++ +++ +|++|+....+ .....+.++++.+
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~---~Id----~v~~g~~~~~~-------------------------~~~~~a~~~~~~l 76 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLS---EID----EVIIGNVLQTG-------------------------LGQNVARQIAINA 76 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG---GCC----EEEEECCCCSS-------------------------TTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeccCCC-------------------------CcchHHHHHHHHc
Confidence 356999999999999999987 444 78998764211 1123578899999
Q ss_pred CC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhH----------------------------
Q 012130 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG---------------------------- 364 (470)
Q Consensus 315 gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~---------------------------- 364 (470)
|+ ++|+++|+++|+|+++||+.|+++|++|+||.+||+|+|.+.......
T Consensus 77 Gl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 4e1l_A 77 GIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFN 156 (395)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETT
T ss_pred CCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccc
Confidence 99 689999999999999999999999999999999999999866522110
Q ss_pred ----H-------------------h---hhc--------ccccCC--------------CCCCCCCCcC-----------
Q 012130 365 ----G-------------------F---VAC--------RALSQR--------------NNDPTKASRP----------- 385 (470)
Q Consensus 365 ----~-------------------f---~~~--------~~Ls~~--------------~~~~~~~~rp----------- 385 (470)
+ | +.. |.+... -.++++.+|+
T Consensus 157 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 157 QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCC
Confidence 0 0 000 000000 0124555654
Q ss_pred --CCC-----CCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh-------cc
Q 012130 386 --WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN-------FS 451 (470)
Q Consensus 386 --Fd~-----~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~-------~~ 451 (470)
|+. ..|...++||++++||+++++|+++|++||++|+|++++++.-. +.+.++...+.+++ .+
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~ai~~al~~agl~~~d 313 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPE---VMGTGPIPATRKALKKAGLSIND 313 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGG---GTTCTHHHHHHHHHHHTTCCGGG
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCC---cchHHHHHHHHHHHHHcCCCHHH
Confidence 553 24677789999999999999999999999999999999986321 12334444444333 29
Q ss_pred ccEEEEeeecc
Q 012130 452 VQMKSLNGFGK 462 (470)
Q Consensus 452 i~~veahGtGT 462 (470)
|+|+|+|..-+
T Consensus 314 Id~ve~~d~fa 324 (395)
T 4e1l_A 314 IDLIEANEAFA 324 (395)
T ss_dssp CSEEEECCSBH
T ss_pred cCEEEecChhH
Confidence 99999998744
No 42
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.82 E-value=8.1e-21 Score=191.30 Aligned_cols=179 Identities=20% Similarity=0.300 Sum_probs=130.5
Q ss_pred CCCCcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCC-CCccccc-cCCHHHHH
Q 012130 162 MKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAPKLSK-RMDKFMLY 238 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~f-i~p~ea~-~mdp~~rl 238 (470)
..|.++.|+|+|+.+|.. .+.+++|+.+.. + +.| +. ..+ |..+... ..++..+|
T Consensus 8 ~~m~~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~------------i~----~~~gi~~r~~~~~~~~~~~l 64 (335)
T 1u6e_A 8 SGARSVGLLSVGAYRPERVVTNDEICQHIDS--S-----DEW------------IY----TRTGIKTRRFAADDESAASM 64 (335)
T ss_dssp CCCSCEEEEEEEEECCSEEEEHHHHTTSSSC--C-----HHH------------HH----HHHCCSEEEECCTTCCHHHH
T ss_pred cCCCceEEEEEEEECCCceecHHHHHHHhCC--C-----HHH------------HH----HhcCCceEeecCCCCCHHHH
Confidence 346789999999999998 677888764311 0 011 00 000 2223222 24568899
Q ss_pred HHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-
Q 012130 239 LLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM- 317 (470)
Q Consensus 239 ~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~- 317 (470)
+++++++||+|+|++++ +++ +|++|+..+++ .. ...+.+|+..||++
T Consensus 65 a~~A~~~al~~ag~~~~---~id----~vi~~t~~~~~--------------------~~-----~~~a~~v~~~lgl~~ 112 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAA---DID----GVIVTTNTHFL--------------------QT-----PPAAPMVAASLGAKG 112 (335)
T ss_dssp HHHHHHHHHHHHTCCGG---GCC----EEEEECSCCCC--------------------SS-----SCHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHcCCCHH---HCC----EEEEEcCCCCC--------------------CC-----ChHHHHHHHHhCCCC
Confidence 99999999999999876 333 78999875322 11 13578999999998
Q ss_pred CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecc
Q 012130 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (470)
Q Consensus 318 Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GE 397 (470)
+|+++|+++|+|++.||++|+++|++|++|.+||+|+|.+. + ..+||| ..+|+++||
T Consensus 113 ~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~---------------------~~~~~d-~~~~~~~gD 169 (335)
T 1u6e_A 113 ILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLS-P---------------------TIDMYD-RGNCFIFAD 169 (335)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECG-G---------------------GCCTTC-TTTTTTBCE
T ss_pred CcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccc-c---------------------ccCccc-cccceEecc
Confidence 69999999999999999999999999999999999999742 1 123454 348999999
Q ss_pred eeEeEeeccchhHHhcCCeeeEEEEE
Q 012130 398 GAGVLLLEELEHAKKRGAKIYAEFRG 423 (470)
Q Consensus 398 GagalvLe~l~~A~~~G~~I~a~I~G 423 (470)
|++++||++.++ ++ ++.++.+
T Consensus 170 GA~A~vl~~~~~---~~--i~~~~~~ 190 (335)
T 1u6e_A 170 GAAAVVVGETPF---QG--IGPTVAG 190 (335)
T ss_dssp EEEEEEEEECSS---CC--BCCCEEE
T ss_pred ccEEEEEEecCC---CC--eeEEEEE
Confidence 999999998754 22 5555543
No 43
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.82 E-value=1e-20 Score=188.74 Aligned_cols=218 Identities=19% Similarity=0.286 Sum_probs=145.2
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccc-cccCCHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAG 243 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~e-a~~mdp~~rl~L~aa 243 (470)
++.|+|+|+..|.. .+.+++++.+. .+ +.| +. +..+ |..+. ...-++..+|+++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i~-~~~g----------i~~r~~~~~~~~~~~l~~~a~ 59 (313)
T 1zow_A 2 NVGIKGFGAYAPEKIIDNAYFEQFLD--TS-----DEW----IS-KMTG----------IKERHWADDDQDTSDLAYEAS 59 (313)
T ss_dssp CEEEEEEEEECCSCEEEGGGGGGTSS--CC-----HHH----HH-HHHC----------CSEEECCCTTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCccccHHHHHHhcC--CC-----HHH----HH-HhhC----------ceEEEecCCCCCHHHHHHHHH
Confidence 48899999999988 46666655321 00 000 00 0000 11111 111245788999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-Cccee
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 322 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gps~t 322 (470)
++||+|+|++++ +++ +|++|+..+++ ..+ ..+.+++..+|++ +|+++
T Consensus 60 ~~al~~ag~~~~---~id----~vi~~~~~~~~--------------------~~~-----~~a~~v~~~lgl~~~~~~~ 107 (313)
T 1zow_A 60 VKAIADAGIQPE---DID----MIIVATATGDM--------------------PFP-----TVANMLQERLGTGKVASMD 107 (313)
T ss_dssp HHHHHHHTCCGG---GCC----EEEEECSSCSC--------------------SSS-----CHHHHHHHHHTCCSCCEEE
T ss_pred HHHHHHcCCCHH---HCC----EEEEEcCCCCC--------------------CCC-----cHHHHHHHHhCCCCCcEEE
Confidence 999999999876 333 78999875321 111 2478999999998 69999
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|+++|+|++.||+.|+++|++|++|.+||+|+|.+. +. .+|||. .+|+++|||++++
T Consensus 108 v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~---------------------~~~~d~-~~~~~~gdGa~A~ 164 (313)
T 1zow_A 108 QLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLS-KI---------------------TDLTDR-STAVLFGDGAGAV 164 (313)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGG-GT---------------------CCTTCH-HHHTTBCEEEEEE
T ss_pred ECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc---------------------cCcccc-cceeeeccceEEE
Confidence 999999999999999999999999999999999732 11 135543 3799999999999
Q ss_pred eeccchhHHhcCCeeeEE-EEEEeeccCCCCCCCc----CcCch----------hHHHHHhh-------ccccEEEEeee
Q 012130 403 LLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTEP----HPDGK----------SAMSLRLN-------FSVQMKSLNGF 460 (470)
Q Consensus 403 vLe~l~~A~~~G~~I~a~-I~G~a~~~dg~~~t~P----~p~g~----------~~~~~~~~-------~~i~~veahGt 460 (470)
||++.++ +.+|++. +.+.+...|..+++.| ..++. ...+..+. -+|+|+++|++
T Consensus 165 vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~ 240 (313)
T 1zow_A 165 IIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQA 240 (313)
T ss_dssp EEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS
T ss_pred EEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC
Confidence 9998764 3566653 4444433333333322 12232 22222211 28999999999
Q ss_pred ccee
Q 012130 461 GKFY 464 (470)
Q Consensus 461 GT~l 464 (470)
||.+
T Consensus 241 ~~~~ 244 (313)
T 1zow_A 241 NIRI 244 (313)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9975
No 44
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.82 E-value=1.7e-20 Score=192.88 Aligned_cols=235 Identities=13% Similarity=0.093 Sum_probs=153.7
Q ss_pred EEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCC--CC-----CCCCCCccc-cccccCCCCCCCCCccccccCCHHHH
Q 012130 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIE--TF-----DCTSFPTKI-AAEIKSFSTDGWVAPKLSKRMDKFML 237 (470)
Q Consensus 167 VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~--~~-----~~~~~~~~~-~g~i~~fd~~~fi~p~ea~~mdp~~r 237 (470)
+.|+|+|+.+|.. .+.++||+.+.... .+.+ +| ...+...+. ....+.|+..+-+++++....++...
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 86 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKS 86 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHH
Confidence 7999999999998 68899998875431 0000 00 001111111 11122233211145555555677889
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC
Q 012130 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (470)
Q Consensus 238 l~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~ 317 (470)
|+++++++||+++|++++ +++ .|++++..+ +..+ ..+.+|+..||++
T Consensus 87 la~~Aa~~aL~~agl~~~---~id----~vi~~t~~~---------------------~~~p-----~~a~~v~~~lGl~ 133 (382)
T 1u0m_A 87 RVPAVIQRALDDAELLAT---DID----VIIYVSCTG---------------------FMMP-----SLTAWLINEMGFD 133 (382)
T ss_dssp HHHHHHHHHHHHHTCCGG---GCS----EEEEECSSS---------------------CCSS-----CHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCHH---HCC----EEEEEecCC---------------------CCCC-----cHHHHHHHHhCCC
Confidence 999999999999999876 333 577776531 1111 3578999999999
Q ss_pred C--cceee-cCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCC---
Q 012130 318 G--PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD--- 391 (470)
Q Consensus 318 G--ps~tV-~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~ad--- 391 (470)
+ |+++| +++|+|+++||+.|+++|++|++|.+||+|+|.+ ++. .+|||.+++
T Consensus 134 ~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~---------------------~~~~d~~~~~~~ 191 (382)
T 1u0m_A 134 STTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SLC---------------------YQPTDLGVGSLL 191 (382)
T ss_dssp TTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GGG---------------------CCTTCCSHHHHH
T ss_pred CCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh---------------------cCcccCCHHHhh
Confidence 8 89999 9999999999999999999999999999999973 221 234554444
Q ss_pred -cceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCC------------C----CCcCcCchhH-HHHHhh----
Q 012130 392 -GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH------------M----TEPHPDGKSA-MSLRLN---- 449 (470)
Q Consensus 392 -G~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~------------~----t~P~p~g~~~-~~~~~~---- 449 (470)
|+++|||++++||++.++ +|..|++... ..+.|+.+ + ..|....... .+..+.
T Consensus 192 ~~~lfGDGA~A~vL~~~~~---~g~~i~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~aL~~ag 266 (382)
T 1u0m_A 192 CNGLFGDGIAAAVVRGRGG---TGVRLERNGS--YLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAPALKELAGEHG 266 (382)
T ss_dssp HHHHBCEEEEEEEEETTTC---SEEEEEEEEE--EECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHHHHHHHHHTTS
T ss_pred ccchhcCCcEEEEEeccCC---CCcEEEEeee--EecCChHHhcCceecCCceEEEeCcHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999997654 3444444322 22444432 1 1122111211 222221
Q ss_pred ---ccccEEEEeeeccee
Q 012130 450 ---FSVQMKSLNGFGKFY 464 (470)
Q Consensus 450 ---~~i~~veahGtGT~l 464 (470)
-+|+|+++|++||.+
T Consensus 267 l~~~dId~v~~H~~~~~i 284 (382)
T 1u0m_A 267 WDASDLDFYIVHAGGPRI 284 (382)
T ss_dssp CCSSCCSCCEEECSHHHH
T ss_pred CCHHHCCEEEECCCCHHH
Confidence 189999999999875
No 45
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.81 E-value=2.3e-20 Score=191.21 Aligned_cols=206 Identities=13% Similarity=0.099 Sum_probs=143.4
Q ss_pred CcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCC-----CCCCCCccc-cccccCCCCCCC-CCccccccC----
Q 012130 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETF-----DCTSFPTKI-AAEIKSFSTDGW-VAPKLSKRM---- 232 (470)
Q Consensus 165 ~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~-----~~~~~~~~~-~g~i~~fd~~~f-i~p~ea~~m---- 232 (470)
.+|.|+|+|+.+|.. .+.+++|+.+....+.-.+..+| ...+...+. ...-..||+.+| +++.+...+
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQF 91 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHHH
Confidence 469999999999998 68899999875422100000000 001111111 000024677777 677777766
Q ss_pred -CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHH
Q 012130 233 -DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (470)
Q Consensus 233 -dp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is 311 (470)
++...|+++++++||+++|++++ +++ +|++|+..+ +..+ ..+.+|+
T Consensus 92 ~~~~~~la~~Aa~~al~~ag~~~~---~id----~vi~~t~~~---------------------~~~p-----~~a~~v~ 138 (374)
T 2h84_A 92 KKVVPDLAQQACLRALKDWGGDKG---DIT----HIVSVTSTG---------------------IIIP-----DVNFKLI 138 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESSC---------------------CCSS-----CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeeCC---------------------CCCC-----cHHHHHH
Confidence 88999999999999999999876 333 678887631 1111 2578999
Q ss_pred HHhCCCC--cceeec-CCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCC
Q 012130 312 MDLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (470)
Q Consensus 312 ~~~gl~G--ps~tV~-tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~ 388 (470)
+.||+++ |++.|. ++|+|+++||+.|+++|++|++|.+||+|+|.+. +. +- .|.|.
T Consensus 139 ~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------~~----------~~~dr 197 (374)
T 2h84_A 139 DLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LH----------FS----------NTDGG 197 (374)
T ss_dssp HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GG----------CC----------CSSSH
T ss_pred HHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hh----------hc----------CCCCH
Confidence 9999998 899996 8999999999999999999999999999999832 21 10 12222
Q ss_pred C--CCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeec
Q 012130 389 N--RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT 427 (470)
Q Consensus 389 ~--adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~ 427 (470)
+ .+|+++|||++++||++.+++..+ .++ +|.+.+..
T Consensus 198 ~~~~~~~lfGDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~ 235 (374)
T 2h84_A 198 DQMVASSIFADGSAAYIIGCNPRIEET--PLY-EVMCSINR 235 (374)
T ss_dssp HHHHHHHHBCCEEEEEEEESSCCTTCC--CCE-EEEEEEEE
T ss_pred HHHhhhhhhccCcEEEEEecCCCcccC--Cce-eEEeeeeE
Confidence 2 158999999999999988776433 355 67776543
No 46
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.81 E-value=4.9e-20 Score=185.66 Aligned_cols=214 Identities=21% Similarity=0.240 Sum_probs=147.7
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa~ 244 (470)
++.|+|+|+.+|.. .+.+++|+.+.... .|- . ...| |..+.....++..+|++++++
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~~-------~~i----~-~~~G----------i~~R~~~~~~~~~~la~~Aa~ 62 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDTSD-------AWI----S-SRTG----------VRQRHIAGDLGSGDLALRAAS 62 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTCCH-------HHH----H-HHHC----------CCEEECCTTCCHHHHHHHHHH
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCCCH-------HHH----H-HhhC----------ceEEEecCCCCHHHHHHHHHH
Confidence 68999999999998 67888887653210 000 0 0000 122222222678899999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-Ccceee
Q 012130 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYSI 323 (470)
Q Consensus 245 eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gps~tV 323 (470)
+||+|+|+ + +++ .|++|+..+++ ..+ ..+.+|++.||++ +|+++|
T Consensus 63 ~al~~ag~--~---~id----~vi~~t~~~~~--------------------~~p-----~~a~~v~~~lgl~~~~~~~v 108 (331)
T 2x3e_A 63 AALASAGL--E---RVD----AVVLATSTGDF--------------------CCP-----ATAPRVAARLGLVGALAFDL 108 (331)
T ss_dssp HHHHHHTC--S---CCS----EEEEECSSCSE--------------------EES-----CSHHHHHHHTTCTTSEEEEE
T ss_pred HHHHhCCc--c---cCC----EEEEEeCCCCC--------------------CCC-----hHHHHHHHHhCCCCCcEEEE
Confidence 99999998 3 333 68888764321 111 2578999999998 899999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeEe
Q 012130 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (470)
Q Consensus 324 ~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagalv 403 (470)
+++|+|++.||+.|+++|++|++|.+||+|+|. +++. +. |+...+|+++|||++++|
T Consensus 109 ~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~-~s~~----------~~------------~~d~~~~~~~GdGA~A~v 165 (331)
T 2x3e_A 109 SAAATGFVYGLASVGSLISAGLADSALLVGVDT-FSHT----------LD------------PADRSTRALFGDGAGAVV 165 (331)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGG----------SC------------TTCHHHHHHBCCEEEEEE
T ss_pred cCcChHHHHHHHHHHHHHHcCCCCEEEEEEeec-cccC----------CC------------ccccccceeeccccEEEE
Confidence 999999999999999999999999999999997 3332 11 112347999999999999
Q ss_pred eccchhHHhcCCeeeEEEEEEeeccCCC---CCCCcCc----------------Cc----------hhHHHHHhh-----
Q 012130 404 LEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEPHP----------------DG----------KSAMSLRLN----- 449 (470)
Q Consensus 404 Le~l~~A~~~G~~I~a~I~G~a~~~dg~---~~t~P~p----------------~g----------~~~~~~~~~----- 449 (470)
|++.++| ++..|++. ...+||. +++.|.. +| +...+....
T Consensus 166 L~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl 239 (331)
T 2x3e_A 166 LRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGW 239 (331)
T ss_dssp EEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9988765 45666554 4455653 4555532 12 111111111
Q ss_pred --ccccEEEEeeeccee
Q 012130 450 --FSVQMKSLNGFGKFY 464 (470)
Q Consensus 450 --~~i~~veahGtGT~l 464 (470)
-+|+|+.+|++||.+
T Consensus 240 ~~~did~~~~H~~~~~~ 256 (331)
T 2x3e_A 240 QASDLHHLVPHQANTRI 256 (331)
T ss_dssp CGGGCSEEEECCCCHHH
T ss_pred CHHHCCEEEEcCCCHHH
Confidence 289999999999975
No 47
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.80 E-value=2.2e-19 Score=186.10 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 235 FMLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 235 ~~rl~L~aa~eALed-AG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
.+.|+++++++||+| +|++++. ++ +|++|+...... ....++.++++.
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~d---Id----~vi~g~~~~~~~------------------------~~~~~a~~va~~ 80 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETL---IS----DMILGVVSPVGD------------------------QGGDIARTAVLA 80 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGG---EE----EEEEECC--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHH---CC----EEEEEecCcccc------------------------ccCcHHHHHHHH
Confidence 467999999999999 9999873 33 688887632110 012357899999
Q ss_pred hCC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhh--------------------hHHhh----
Q 012130 314 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------------------LGGFV---- 367 (470)
Q Consensus 314 ~gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~--------------------~~~f~---- 367 (470)
+|+ .+|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+..... ..++.
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 7899999999999999999999999999999999999998654110 00000
Q ss_pred --------------------------hcccccC--------C---CCCCCCCCcC-------------CCCC--------
Q 012130 368 --------------------------ACRALSQ--------R---NNDPTKASRP-------------WDIN-------- 389 (470)
Q Consensus 368 --------------------------~~~~Ls~--------~---~~~~~~~~rp-------------Fd~~-------- 389 (470)
+.+.+.. . ..+|+..+|+ |+..
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 0000000 0 0125666665 6532
Q ss_pred ------------------CCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchhHHHHHhh--
Q 012130 390 ------------------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKSAMSLRLN-- 449 (470)
Q Consensus 390 ------------------adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~~~~~~~~-- 449 (470)
.|...++||++++||+++++|+++|++++++|+|++.+++..+... .+....+.+++
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~---~~~~~a~~~al~~ 317 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIML---TGPTPATRKVLDR 317 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CC---CTHHHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcccc---HHHHHHHHHHHHH
Confidence 3555699999999999999999999999999999999988643322 22222322222
Q ss_pred -----ccccEEEEeeeccee
Q 012130 450 -----FSVQMKSLNGFGKFY 464 (470)
Q Consensus 450 -----~~i~~veahGtGT~l 464 (470)
.+|+|+|+|.+-|..
T Consensus 318 Agl~~~dId~~e~hdaf~~~ 337 (407)
T 3svk_A 318 AGLTIDDIDLFELNEAFASV 337 (407)
T ss_dssp HTCCGGGCSEEEECCSBHHH
T ss_pred cCCCHHHCCEEEEeChhHHH
Confidence 299999999987754
No 48
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.80 E-value=2.3e-20 Score=213.22 Aligned_cols=247 Identities=11% Similarity=0.050 Sum_probs=171.0
Q ss_pred CCCCcEEEEeecccCCCC-------------CCHHHHHHHH------HcCCCcceeCCCCCCCCCCccccccccCCCCCC
Q 012130 162 MKQKRVVVTGMGLVSPLG-------------HEPDVFYNNL------LEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g-------------~~~~~~w~~L------~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~ 222 (470)
+.+.++.|+|+|..+|.+ .+.+++|+.+ ..++++|.+...++...+.. ..|++..
T Consensus 599 ~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~------~~~~~~~ 672 (979)
T 3tsy_A 599 RAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLE------EHPNIGA 672 (979)
T ss_dssp SCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHH------HCHHHHS
T ss_pred cccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhh------cCccccc
Confidence 345689999999999999 4444455555 44566666543332211111 1233333
Q ss_pred CCCccc----cccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccc
Q 012130 223 WVAPKL----SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCV 298 (470)
Q Consensus 223 fi~p~e----a~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~ 298 (470)
++.++. .+.++....|+++|+++||++||++++ +++ .|+++++. ++..
T Consensus 673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~---dId----~ii~~t~~---------------------~~~~ 724 (979)
T 3tsy_A 673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKS---KIT----HLVFCTTS---------------------GVEM 724 (979)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESS---------------------CCCS
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH---HCC----EEEEEeeC---------------------CCCC
Confidence 333433 333444666999999999999999986 333 47777642 1112
Q ss_pred cccchhhHHHHHHHHhCCCCcc---eeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCC
Q 012130 299 PFATTNMGSAMLAMDLGWMGPN---YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 375 (470)
Q Consensus 299 ~~~~~~~~a~~is~~~gl~Gps---~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~ 375 (470)
+ ..+.+|+..||++++. +.++++|+++++||..|+++|++|.++.|||+|+|......
T Consensus 725 p-----~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~-------------- 785 (979)
T 3tsy_A 725 P-----GADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF-------------- 785 (979)
T ss_dssp S-----CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC--------------
T ss_pred C-----cHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe--------------
Confidence 2 4688999999999765 99999999999999999999999999999999999732110
Q ss_pred CCCCCCCCcCCCCCCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCCCCCCCcCcCchh-------------
Q 012130 376 NNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGKS------------- 442 (470)
Q Consensus 376 ~~~~~~~~rpFd~~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg~~~t~P~p~g~~------------- 442 (470)
.+...+.++...+++++|||||++||++.+++..++..++....+.....+..+.+.+.+.+.+
T Consensus 786 ---~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 862 (979)
T 3tsy_A 786 ---RGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLI 862 (979)
T ss_dssp ---CCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred ---eCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHH
Confidence 1112233333446789999999999999888877888999999999988888776666544322
Q ss_pred -----HHHHHhh-------ccccEEEEeeeccee
Q 012130 443 -----AMSLRLN-------FSVQMKSLNGFGKFY 464 (470)
Q Consensus 443 -----~~~~~~~-------~~i~~veahGtGT~l 464 (470)
..+..+. .+|+|+.+|++++.+
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i 896 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAI 896 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCChHH
Confidence 1111111 299999999999865
No 49
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.70 E-value=2.2e-17 Score=167.32 Aligned_cols=205 Identities=17% Similarity=0.194 Sum_probs=141.5
Q ss_pred CCCCcEEEEeecccCCCC-CCHHHHHHHHHc-----CCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHH
Q 012130 162 MKQKRVVVTGMGLVSPLG-HEPDVFYNNLLE-----GVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 235 (470)
Q Consensus 162 ~~~~~VaItGmg~~~P~g-~~~~~~w~~L~~-----G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~ 235 (470)
+..+.|.|+|+|...|.- .+.+++.+.+.. +.+. ..+. ...+...+. +..+. ...
T Consensus 8 m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~-~~i~--~~tGi~~R~-----------~~~~~-----~~~ 68 (345)
T 3s21_A 8 MLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKT-DVLG--DVAGIHARR-----------LWDQD-----VQA 68 (345)
T ss_dssp GSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCC-CHHH--HTTCCSEEE-----------ECSSC-----CCH
T ss_pred ceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCH-HHHH--HhhCceeEE-----------ECCCC-----CCH
Confidence 445789999999999998 678888776532 2110 0000 000010000 00111 135
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
..|+.+++++||+++|++++ +++ .|++|+...++ .. ...+.+|+..+|
T Consensus 69 ~~La~~Aa~~al~~ag~~~~---~Id----~vi~~t~~~~~--------------------~~-----p~~a~~v~~~lG 116 (345)
T 3s21_A 69 SDAATQAARKALIDANIGIE---KIG----LLINTSVSRDY--------------------LE-----PSTASIVSGNLG 116 (345)
T ss_dssp HHHHHHHHHHHHHHHTCCGG---GCC----EEEECCSCCSC--------------------SS-----SCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeCCCCC--------------------CC-----ChHHHHHHHHhC
Confidence 67999999999999999986 333 58888764221 11 135789999999
Q ss_pred CC--CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcc
Q 012130 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (470)
Q Consensus 316 l~--Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~ 393 (470)
+. +|++.|+++|+|++.||+.|+++|++|+++.+||+|+|.+.... .+...++++ +.+.|++||.+.+++
T Consensus 117 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~---~~~~~~~~~-----~~~~~~~f~~~~~~~ 188 (345)
T 3s21_A 117 VSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVY---EKTLERMTS-----PDVTEEEFRNELAAL 188 (345)
T ss_dssp CCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHH---HHHHHHHTC-----TTCCHHHHHHHHGGG
T ss_pred CCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhh---ccccccccC-----Cccchhhhhhhccce
Confidence 95 79999999999999999999999999999999999999854332 222233444 556899999999999
Q ss_pred eecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCC
Q 012130 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDA 430 (470)
Q Consensus 394 v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg 430 (470)
++|||++++||++.+.. ..+.. |.+.....|+
T Consensus 189 ~~GdGA~A~vl~~~~~~-~~~~~----i~~~~~~~~~ 220 (345)
T 3s21_A 189 TLGCGAAAMVMARSELV-PDAPR----YKGGVTRSAT 220 (345)
T ss_dssp GBCCEEEEEEEEEGGGS-TTSCE----EEEEEEEECG
T ss_pred eeccceeEEEEecCCCC-CCCcc----eeeeccccCc
Confidence 99999999999985442 11233 4555555554
No 50
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.69 E-value=1.1e-16 Score=164.94 Aligned_cols=141 Identities=14% Similarity=0.116 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 234 p~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
....|+.+++++||+++|++++ +++ .|++|+..+ +.. ...+.+|+..
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~---~Id----~vi~~t~~~---------------------~~~-----p~~a~~v~~~ 158 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAA---EIG----LLVLATSTG---------------------FIA-----PGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGG---GEE----EEEEEESSC---------------------CCS-----SCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEEeCC---------------------Ccc-----ChHHHHHHHH
Confidence 5678999999999999999875 222 466676531 111 1357899999
Q ss_pred hCCCCc--ceee-cCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCC
Q 012130 314 LGWMGP--NYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (470)
Q Consensus 314 ~gl~Gp--s~tV-~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~a 390 (470)
||++++ .+.+ +++|+|++.||+.|+++|++|.+|.+||+|+|.+. +. + -|+.++
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~------------~~~~~r 215 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCS-VN----------A------------VFADDI 215 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECG-GG----------C------------CCCSSH
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-cc----------C------------CCCCCH
Confidence 999985 5777 89999999999999999999999999999999732 11 0 034455
Q ss_pred C----cceecceeEeEeeccchhHHhcCCeeeEEEEEEeec--cCCC
Q 012130 391 D----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--SDAY 431 (470)
Q Consensus 391 d----G~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~--~dg~ 431 (470)
+ |+++|||++++||++.+++..+|. .+++|.+++.. .|+.
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~ 261 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTE 261 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCT
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCch
Confidence 5 899999999999998766533444 56788887554 6663
No 51
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.65 E-value=7e-16 Score=155.50 Aligned_cols=171 Identities=15% Similarity=0.277 Sum_probs=121.3
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccc-cccCCHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAG 243 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~e-a~~mdp~~rl~L~aa 243 (470)
+|.|+|+|+.+|.. .+.+++|+.+.+.. +..-+.| +..+ .| |..+. +..-.....|+.+++
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~~~~~~----i~~r-tg----------i~~r~~~~~~~~~~~la~~Aa 73 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IETSDEW----IVAR-TG----------IHARYFAEPDVTTSDLAFIAS 73 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHH----HHHH-HC----------CSEEEECCTTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CCCCHHH----hHHh-cC----------ceEEEEcCCCCCHHHHHHHHH
Confidence 79999999999997 78999999875411 1000000 0000 00 00110 011134678999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCC--CCcce
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW--MGPNY 321 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl--~Gps~ 321 (470)
++||+++|++++ +++ .|++|+..+++ .. ...+.+|+..+|+ ++|++
T Consensus 74 ~~al~~ag~~~~---~Id----~vi~~t~~~~~--------------------~~-----p~~a~~v~~~lgl~~~~~~~ 121 (333)
T 4dfe_A 74 QRAIEAADIDPQ---SID----LIIVATSTPDF--------------------VF-----PSTACLLQNKLGIRNHGAAF 121 (333)
T ss_dssp HHHHHHHTCCGG---GCC----EEEEECSSCSS--------------------SB-----SCHHHHHHHHTTCCSCCEEE
T ss_pred HHHHHHcCCCHH---HCC----EEEEEeCCCCC--------------------CC-----CcHHHHHHHHhCCCCCCcEE
Confidence 999999999986 333 68888764322 11 1347899999999 68999
Q ss_pred eecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEe
Q 012130 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (470)
Q Consensus 322 tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGaga 401 (470)
+|+++|+|++.||+.|+++|++|+++.+||+|+|.+.... -|+....++++|||+++
T Consensus 122 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~~~d~~~~~lfGDGA~A 178 (333)
T 4dfe_A 122 DVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------------------DFKDRTTCVLFGDGAGA 178 (333)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------CTTCTTTTTTBCEEEEE
T ss_pred EeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------------------CcccccceeeeccccEE
Confidence 9999999999999999999999999999999999732111 12223467899999999
Q ss_pred Eeeccch
Q 012130 402 LLLEELE 408 (470)
Q Consensus 402 lvLe~l~ 408 (470)
+||++.+
T Consensus 179 ~vl~~~~ 185 (333)
T 4dfe_A 179 VILQASD 185 (333)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 9999854
No 52
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=99.48 E-value=1.1e-13 Score=147.37 Aligned_cols=205 Identities=15% Similarity=0.058 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHH
Q 012130 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (470)
Q Consensus 232 mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is 311 (470)
+++. .|+.+++++||+|||++++.++ .--.|++++...... .............+..++
T Consensus 40 ~s~~-dL~a~Ai~~AL~dAGl~p~~Vd---~vI~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~va 98 (520)
T 4egv_A 40 MSSV-ELATEAAKAALHDCGADADTVA---RAIDTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSVA 98 (520)
T ss_dssp CCHH-HHHHHHHHHHHHHTSSCHHHHH---HHCCEEEECCC-------------------------------CCHHHHHH
T ss_pred CCHH-HHHHHHHHHHHHHhCcCHHHcc---eEEEEEeeccccccc-----------------chhhhhhccccCHHHHHH
Confidence 3443 4888999999999999987333 222355554332100 001111223344577899
Q ss_pred HHhCCCC-cceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhc---------------------
Q 012130 312 MDLGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVAC--------------------- 369 (470)
Q Consensus 312 ~~~gl~G-ps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~--------------------- 369 (470)
..+|+.+ |.++++.+|+|++.+|++|++.|++|+||++|+||+|.+.+...+......
T Consensus 99 ~~lGl~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (520)
T 4egv_A 99 RNIGADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGI 178 (520)
T ss_dssp HHHTCCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC--------------------------------
T ss_pred HHcCCCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchh
Confidence 9999986 677889999999999999999999999999999999997543211100000
Q ss_pred ----------------------------c------------------cccCCCCCCCCCC--------------------
Q 012130 370 ----------------------------R------------------ALSQRNNDPTKAS-------------------- 383 (470)
Q Consensus 370 ----------------------------~------------------~Ls~~~~~~~~~~-------------------- 383 (470)
+ ..... +|+...
T Consensus 179 a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~--np~a~~r~~~t~E~l~~l~p~~r~i~ 256 (520)
T 4egv_A 179 FDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAK--NPYSSAPTERSVEELLTVTASNRMIV 256 (520)
T ss_dssp --CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH--CTTSSSCCCCCHHHHHSCCSSSCEEE
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccccccc--CccccccCCCCHHHhcccCccccccc
Confidence 0 00000 011111
Q ss_pred cCCCCCCCcceecceeEeEeeccchhHHhcCCeeeEEEEEEeeccCC--CCCCCcCc---CchhHHHHHhh-------cc
Q 012130 384 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDA--YHMTEPHP---DGKSAMSLRLN-------FS 451 (470)
Q Consensus 384 rpFd~~adG~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~dg--~~~t~P~p---~g~~~~~~~~~-------~~ 451 (470)
.|+-.-.|...+.||++++||.+.+.|++.|.++++.|.+++..... ..+..|+. .++..++.+++ .|
T Consensus 257 ~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 336 (520)
T 4egv_A 257 DPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDD 336 (520)
T ss_dssp TTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGG
T ss_pred CCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHH
Confidence 11111123444689999999999999999999999988888876543 23333331 23333333332 29
Q ss_pred ccEEEEee
Q 012130 452 VQMKSLNG 459 (470)
Q Consensus 452 i~~veahG 459 (470)
|+++|+|.
T Consensus 337 id~~E~~d 344 (520)
T 4egv_A 337 VAAFDLYS 344 (520)
T ss_dssp EEEEEECC
T ss_pred CCEEEEeC
Confidence 99999997
No 53
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.46 E-value=1.3e-13 Score=141.75 Aligned_cols=185 Identities=11% Similarity=0.076 Sum_probs=125.6
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHc---C---------------CCcceeCCCCCCCCCCcc-ccccccCCCCCCC-C
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLE---G---------------VSGISEIETFDCTSFPTK-IAAEIKSFSTDGW-V 224 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~---G---------------~s~i~~~~~~~~~~~~~~-~~g~i~~fd~~~f-i 224 (470)
++.|+|+|...|.- .+.+++++.+.. . +.+|++ |.-. .+.. +.+....||..++ +
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~--~~~~~~~~~p~~~~~~~~~~ 87 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEK--RYLH--VTEEILKENPNIAAYEATSL 87 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCE--EECS--CCHHHHHHCHHHHSSSSSCH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCc--eEEe--cChhhhccCcccccccCCCH
Confidence 58999999999997 455556555422 1 122221 1000 0000 0011122444433 4
Q ss_pred CccccccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchh
Q 012130 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTN 304 (470)
Q Consensus 225 ~p~ea~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 304 (470)
..++...+.....|+.+++.+||+++|++++ +++ .|++++..+ +.. .
T Consensus 88 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~---~Id----~li~~t~~~---------------------~~~-----p 134 (387)
T 3a5r_A 88 NVRHKMQVKGVAELGKEAALKAIKEWGQPKS---KIT----HLIVCCLAG---------------------VDM-----P 134 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESSC---------------------CEE-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCC---------------------CCC-----C
Confidence 5555566677889999999999999999876 333 577776532 111 1
Q ss_pred hHHHHHHHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCC
Q 012130 305 MGSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTK 381 (470)
Q Consensus 305 ~~a~~is~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~ 381 (470)
..+.+|+..+|++++ .+.|.++|+|++.||..|.++|++|.++.+||+|+|.+. ..
T Consensus 135 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~-------------------- 193 (387)
T 3a5r_A 135 GADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTT-TC-------------------- 193 (387)
T ss_dssp CHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCT-TT--------------------
T ss_pred cHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccc-hh--------------------
Confidence 357899999999885 789999999999999999999999999999999999732 10
Q ss_pred CCcCCCC----CCCcceecceeEeEeeccch
Q 012130 382 ASRPWDI----NRDGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 382 ~~rpFd~----~adG~v~GEGagalvLe~l~ 408 (470)
...|+|. ...++++||||+++||++.+
T Consensus 194 ~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~ 224 (387)
T 3a5r_A 194 FRGPSETHLDSMIGQAILGDGAAAVIVGADP 224 (387)
T ss_dssp CCCCCSSCCSSTTHHHHBCCEEEEEEEESSC
T ss_pred hcCCCccchhhccccceeccceeEEEEecCC
Confidence 0123332 33689999999999998754
No 54
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.41 E-value=2.5e-13 Score=140.81 Aligned_cols=132 Identities=14% Similarity=0.075 Sum_probs=101.6
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHH
Q 012130 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS 307 (470)
Q Consensus 228 ea~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 307 (470)
....++....|+.+++.+||+++|++++ +++ .|++|+..+ +.. ...+
T Consensus 118 ~~~~~~~~~~La~~Aa~~AL~~agl~~~---~Id----~li~~t~~~---------------------~~~-----p~~a 164 (413)
T 1xes_A 118 QAMLAMEVPRLAKEAAEKAIQEWGQSKS---GIT----HLIFCSTTT---------------------PDL-----PGAD 164 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESCC---------------------CEE-----SCHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEEeCC---------------------Ccc-----chHH
Confidence 3344457788999999999999999876 333 577787632 111 1247
Q ss_pred HHHHHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCc
Q 012130 308 AMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (470)
Q Consensus 308 ~~is~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~r 384 (470)
.+|+..+|++++ .+.|..+|+|++.||..|.++|++|.+|.+||+|+|.+.. . ... ++ .+
T Consensus 165 ~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~-~---------~~~-----~~--d~ 227 (413)
T 1xes_A 165 FEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAV-T---------FRG-----PS--ET 227 (413)
T ss_dssp HHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTT-T---------CCC-----CC--TT
T ss_pred HHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhh-h---------hcC-----CC--cc
Confidence 889999999885 7899999999999999999999999999999999997321 0 011 22 14
Q ss_pred CCCCCCCcceecceeEeEeeccchh
Q 012130 385 PWDINRDGFVMGEGAGVLLLEELEH 409 (470)
Q Consensus 385 pFd~~adG~v~GEGagalvLe~l~~ 409 (470)
+|+...+++++||||+++||++.+.
T Consensus 228 ~~~~~~~~~lfGDGA~A~vl~~~~~ 252 (413)
T 1xes_A 228 HLDSLVGQALFGDGASALIVGADPI 252 (413)
T ss_dssp CHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred chhhcccceeEecccEEEEEecCCC
Confidence 5666678999999999999997543
No 55
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.41 E-value=2.6e-12 Score=132.31 Aligned_cols=120 Identities=19% Similarity=0.278 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 234 p~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
....|+.+|+++||+++|++++. ++ .|++++...++ ..+ ..+.+|+..
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~d---Id----~vi~~t~t~~~--------------------~~p-----~~a~~v~~~ 163 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRER---IG----AVLCACSNMQR--------------------AYP-----AMAIEVQNA 163 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGG---EE----EEEEESSCCSC--------------------SBS-----CHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHH---CC----EEEEEecCCCC--------------------Ccc-----HHHHHHHHH
Confidence 35689999999999999999863 32 57777764221 111 257889999
Q ss_pred hCCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcc
Q 012130 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (470)
Q Consensus 314 ~gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~ 393 (470)
+|++.|++.|+.+|+|++.||..|.++|++|.++.+||+|+|.+ +.. +. +.| ....+
T Consensus 164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~-S~~----------~d-----------~~d-r~t~~ 220 (392)
T 3led_A 164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEIC-SGH----------LN-----------FRD-RDSHF 220 (392)
T ss_dssp TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGG----------CC-----------TTC-TTTTT
T ss_pred hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhc-CCc----------CC-----------cCc-ccCCc
Confidence 99999999999999999999999999999999999999999973 211 11 111 12468
Q ss_pred eecceeEeEeeccch
Q 012130 394 VMGEGAGVLLLEELE 408 (470)
Q Consensus 394 v~GEGagalvLe~l~ 408 (470)
++|+||+++||++.+
T Consensus 221 lFGDGA~A~vl~~~~ 235 (392)
T 3led_A 221 IFGDVATAAIVERAD 235 (392)
T ss_dssp TBCEEEEEEEEEEGG
T ss_pred ccccccEEEEEEecC
Confidence 899999999999744
No 56
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.41 E-value=2.8e-13 Score=140.05 Aligned_cols=187 Identities=11% Similarity=0.104 Sum_probs=127.3
Q ss_pred CCcEEEEeecccCCCC-CCHHHHHHHHHc-C-----------------CCcceeCCCCCCCCCCc-cccccccCCCCCCC
Q 012130 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLE-G-----------------VSGISEIETFDCTSFPT-KIAAEIKSFSTDGW 223 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g-~~~~~~w~~L~~-G-----------------~s~i~~~~~~~~~~~~~-~~~g~i~~fd~~~f 223 (470)
+.++.|+|+|...|.- .+.+++++.+.. . +.+|++ |.-. .+. .+.+....||..++
T Consensus 19 ~~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~--~~~~~~~~~p~~~d~~~~ 94 (402)
T 1ee0_A 19 QGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKK--RYLA--LTEDYLQENPTMCEFMAP 94 (402)
T ss_dssp -CCCEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCE--EECS--CCHHHHHHSGGGGSTTSS
T ss_pred CCCcEEEEeeecCCCcccCHHHHHHHHHHhhcccchhhhHHHHHHHHHhcCccc--eeEe--cCchhhccCcccccccCC
Confidence 3568999999999998 678888877632 1 111211 1000 000 00111223444333
Q ss_pred -CCccccccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccc
Q 012130 224 -VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFAT 302 (470)
Q Consensus 224 -i~p~ea~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 302 (470)
+..+....+.....|+.+++.+||+++|++++ +++ .|++++..+ + .
T Consensus 95 ~~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~---~Id----~vi~~t~~~---------------------~-----~ 141 (402)
T 1ee0_A 95 SLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKS---KIT----HLIFCTTAG---------------------V-----D 141 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEECSSC---------------------C-----E
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCC---------------------C-----C
Confidence 44455555567788999999999999999876 333 467776531 1 1
Q ss_pred hhhHHHHHHHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCC
Q 012130 303 TNMGSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDP 379 (470)
Q Consensus 303 ~~~~a~~is~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~ 379 (470)
....+.+|+..||+.+. .+.|.++|+|++.||..|.++|++|.++.+||+|+|.+ +..
T Consensus 142 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i~~g~~~~vLvvg~E~~-s~~------------------ 202 (402)
T 1ee0_A 142 MPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLAENNKGSRVLIVCSEIT-AIL------------------ 202 (402)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHHHHSTTCCEEEEEEECG-GGG------------------
T ss_pred CChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh------------------
Confidence 11257899999999874 78999999999999999999999999999999999972 210
Q ss_pred CCCCcCCCCCC----CcceecceeEeEeeccch
Q 012130 380 TKASRPWDINR----DGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 380 ~~~~rpFd~~a----dG~v~GEGagalvLe~l~ 408 (470)
-..|+|.+. .++++||||+++||++.+
T Consensus 203 --~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~ 233 (402)
T 1ee0_A 203 --FHGPNENHLDSLVAQALFGDGAAALIVGSGP 233 (402)
T ss_dssp --CCCCCTTCHHHHHHTTTBCCEEEEEEEESSC
T ss_pred --hcCCcccchhhhccceeEecceEEEEEecCC
Confidence 112444332 588999999999998754
No 57
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.40 E-value=3.1e-13 Score=139.01 Aligned_cols=191 Identities=12% Similarity=0.065 Sum_probs=124.8
Q ss_pred CCcEEEEeecccCCCC-CCHHHHHHHHHc-CC-Cccee---CCCC--CCCCCCcccc--------ccccCCCCCCC-CCc
Q 012130 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLE-GV-SGISE---IETF--DCTSFPTKIA--------AEIKSFSTDGW-VAP 226 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g-~~~~~~w~~L~~-G~-s~i~~---~~~~--~~~~~~~~~~--------g~i~~fd~~~f-i~p 226 (470)
+.++.|+|+|+..|.- .+.+++++.+.. .. +...+ ...| ...+...+.. +....||..+. +.+
T Consensus 14 ~~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~ 93 (389)
T 1i88_A 14 EGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDA 93 (389)
T ss_dssp CSCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHHCHHHHSSSCSCHHH
T ss_pred CCCeEEEEEEeeCCCcccCHHHHHHHHHHhcccccchhHHHHHHHHHHhCCCCceeeecChhhhccCcchhcccCCChHH
Confidence 3568999999999987 455666665422 10 00000 0000 0011111110 01112333222 344
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhH
Q 012130 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMG 306 (470)
Q Consensus 227 ~ea~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 306 (470)
+....+.....|+.+++.+||+++|++++ +++ .|++++..+ +.. ...
T Consensus 94 r~~~~~~~~~~La~~Aa~~aL~~agl~~~---~Id----~li~~t~~~---------------------~~~-----p~~ 140 (389)
T 1i88_A 94 RQDMVVVEVPRLGKEAAVKAIKEWGQPKS---KIT----HLIVCTTSG---------------------VDM-----PGA 140 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESSC---------------------CCS-----SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEECCC---------------------CCC-----chH
Confidence 55555567788999999999999999876 333 577777531 111 125
Q ss_pred HHHHHHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCC
Q 012130 307 SAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 383 (470)
Q Consensus 307 a~~is~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~ 383 (470)
+.+++..+|++++ .+.|.++|+|++.||..|.++|++|.++.+||+|+|.+ +.. ..
T Consensus 141 a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i~~g~~~~vLvvg~E~~-s~~--------------------~~ 199 (389)
T 1i88_A 141 DYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVT-AVT--------------------FR 199 (389)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECG-GGT--------------------CC
T ss_pred HHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-cHh--------------------Hc
Confidence 7899999999875 78999999999999999999999999999999999973 210 11
Q ss_pred cCCCCCC----CcceecceeEeEeeccch
Q 012130 384 RPWDINR----DGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 384 rpFd~~a----dG~v~GEGagalvLe~l~ 408 (470)
.|+|.++ .++++||||+++||++.+
T Consensus 200 ~~~d~~~~~~~~~~lfGDGA~A~vl~~~~ 228 (389)
T 1i88_A 200 GPSDTHLDSLVGQALFGDGAAALIVGSDP 228 (389)
T ss_dssp CCCTTCHHHHHHHHHBCCEEEEEEEESSC
T ss_pred CccccccccccccceEecceEEEEEecCC
Confidence 2344332 488999999999998754
No 58
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.40 E-value=6.6e-13 Score=137.37 Aligned_cols=202 Identities=14% Similarity=0.103 Sum_probs=130.6
Q ss_pred CCcEEEEeecccCCCC-CCHHHHHHHHHc-C-----------------CCcceeCCCCCCCCCCcc-ccccccCCCCCCC
Q 012130 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLE-G-----------------VSGISEIETFDCTSFPTK-IAAEIKSFSTDGW 223 (470)
Q Consensus 164 ~~~VaItGmg~~~P~g-~~~~~~w~~L~~-G-----------------~s~i~~~~~~~~~~~~~~-~~g~i~~fd~~~f 223 (470)
+.++.|+|+|...|.- .+.+++++.+.. . +.+|++- ++-. +.. ..+....||..+.
T Consensus 27 ~~~~~I~~ig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R-~~a~---~~~~~~~~p~~~~~~~~ 102 (406)
T 2d3m_A 27 DGTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKR-YFNY---DEEFLKKYPNITSYDEP 102 (406)
T ss_dssp SSCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEE-EESC---CHHHHTTCTTTSSSSSS
T ss_pred CCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhHHHHHHHHHhccCCcce-EEee---ChhhhccCcccccccCC
Confidence 3568999999999987 455556555422 1 1222210 0000 000 0011122333322
Q ss_pred -CCccccccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccc
Q 012130 224 -VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFAT 302 (470)
Q Consensus 224 -i~p~ea~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 302 (470)
+..+....+.....|+.+++++||+++|++++ +++ .|++++..+ +..
T Consensus 103 ~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~---~Id----~vi~~t~~~---------------------~~~---- 150 (406)
T 2d3m_A 103 SLNDRQDICVPGVPALGTEAAVKAIEEWGRPKS---EIT----HLVFCTSCG---------------------VDM---- 150 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEESSC---------------------CEE----
T ss_pred ChHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecCC---------------------CCC----
Confidence 34455555567788999999999999999876 333 577776531 111
Q ss_pred hhhHHHHHHHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCC
Q 012130 303 TNMGSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDP 379 (470)
Q Consensus 303 ~~~~a~~is~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~ 379 (470)
...+.+|+..+|++++ .+.|.++|+|++.||+.|+++|++|.+|.+||+|+|.+. .. +
T Consensus 151 -p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~E~~s-~~----------~------- 211 (406)
T 2d3m_A 151 -PSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLAENNRGARVLVVCAELTI-MM----------L------- 211 (406)
T ss_dssp -SCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECGG-GT----------C-------
T ss_pred -CCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hh----------e-------
Confidence 1257899999999985 789999999999999999999999999999999999732 10 0
Q ss_pred CCCCcCCCCC---C-CcceecceeEeEeeccchhHHhcC-CeeeEEEEEEee
Q 012130 380 TKASRPWDIN---R-DGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSF 426 (470)
Q Consensus 380 ~~~~rpFd~~---a-dG~v~GEGagalvLe~l~~A~~~G-~~I~a~I~G~a~ 426 (470)
..|+|.+ + .++++||||+++||++.+.. + ...+.++.+.+.
T Consensus 212 ---~~~~d~~~~~~~~~~lfGDGAaA~vL~~~~~~---~~~~~~~~l~~~~~ 257 (406)
T 2d3m_A 212 ---RAPNETHLDNAIGISLFGDGAAALIIGSDPII---GVEKPMFEIVCTKQ 257 (406)
T ss_dssp ---CCCCSTTHHHHHHHTTBCCEEEEEEEESSCCT---TTCCCCEEEEEEEE
T ss_pred ---eCCcccchhhhhccceeccceEEEEEecCCCC---ccCCCceEEEeccc
Confidence 1123322 2 48899999999999875431 2 111346666654
No 59
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.38 E-value=1.7e-12 Score=133.93 Aligned_cols=162 Identities=16% Similarity=0.147 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeE-EEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCG-VLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvG-V~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
...|+++++.+||++ ++++ +|+ |++|+..+.+ .. ...+..|+..
T Consensus 51 ~~~la~~Aa~~aL~~--~~~~--------~Id~li~~t~~~~~--------------------~~-----p~~a~~v~~~ 95 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--EDKK--------KIGMVIVATESAVD--------------------AA-----KAAAVQIHNL 95 (396)
T ss_dssp HHHHHHHHHHTTCCH--HHHH--------HEEEEEEECSSCSB--------------------SS-----SCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--CCHH--------HCCEEEEEeCCCCC--------------------CC-----CCHHHHHHHH
Confidence 467899999999987 4433 444 5557653211 11 1357899999
Q ss_pred hCCC--CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCC
Q 012130 314 LGWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 391 (470)
Q Consensus 314 ~gl~--Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~ad 391 (470)
||++ .|++.|.++|+|++.||..|.++|++|.++.+||+|+|. +... ++ ..+
T Consensus 96 lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~--s~~~-----------------------~~-~~~ 149 (396)
T 1xpm_A 96 LGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT--ARYG-----------------------LN-SGG 149 (396)
T ss_dssp TTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE--ECCC-----------------------TT-CSS
T ss_pred hCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh--hccc-----------------------cC-CCC
Confidence 9997 499999999999999999999999999999999999995 1110 11 136
Q ss_pred cceecceeEeEeeccchhHHhcCCeeeEEEEEEeecc-CCCCCCCcCc------CchhHH---------HHHhh------
Q 012130 392 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS-DAYHMTEPHP------DGKSAM---------SLRLN------ 449 (470)
Q Consensus 392 G~v~GEGagalvLe~l~~A~~~G~~I~a~I~G~a~~~-dg~~~t~P~p------~g~~~~---------~~~~~------ 449 (470)
++++||||+++||++. ..|++...|.+... |..+++.|++ +|.... ....+
T Consensus 150 ~~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl 222 (396)
T 1xpm_A 150 EPTQGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGK 222 (396)
T ss_dssp GGGCEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999863 35777766655544 6666666755 454311 01111
Q ss_pred --ccccEEEEeeeccee
Q 012130 450 --FSVQMKSLNGFGKFY 464 (470)
Q Consensus 450 --~~i~~veahGtGT~l 464 (470)
-+|+|+-.|+++|.+
T Consensus 223 ~~~did~~~~H~~~~~~ 239 (396)
T 1xpm_A 223 SLADFASLCFHVPFTKM 239 (396)
T ss_dssp CGGGCSEEEECCSSHHH
T ss_pred CHHHCCEEEecCCchHH
Confidence 199999999999865
No 60
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.35 E-value=1.2e-12 Score=135.37 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=96.8
Q ss_pred cccCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHH
Q 012130 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (470)
Q Consensus 229 a~~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 308 (470)
...+.....|+.+++++||+++|++++ +++ .|++++..+ +.. ...+.
T Consensus 109 ~~~~~~~~~La~~Aa~~aL~~agl~~~---~Id----~vi~~t~~~---------------------~~~-----p~~a~ 155 (402)
T 3awk_A 109 DIAVLEVPKLAKEAAISAIKQWGQPKS---KIT----HLVFATTSG---------------------VDM-----PGADF 155 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGG---GCC----EEEEEECSC---------------------CCS-----SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEEeCC---------------------CcC-----ChHHH
Confidence 333456678999999999999999876 333 577777631 111 12578
Q ss_pred HHHHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcC
Q 012130 309 MLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRP 385 (470)
Q Consensus 309 ~is~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rp 385 (470)
+|+..+|+.+. .+.|..+|+|++.||..|.++|++|.++.+||+|+|.+. .. ...|
T Consensus 156 ~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~sg~~~~vLvvg~E~~s-~~--------------------~~~~ 214 (402)
T 3awk_A 156 QLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLAENNKGARVLVACSEVTA-VT--------------------FRAP 214 (402)
T ss_dssp HHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECTT-TT--------------------CCCC
T ss_pred HHHHHcCCCCccceeeEECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh--------------------hcCC
Confidence 89999999874 789999999999999999999999999999999999732 10 1134
Q ss_pred CCCCC----CcceecceeEeEeeccch
Q 012130 386 WDINR----DGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 386 Fd~~a----dG~v~GEGagalvLe~l~ 408 (470)
+|.+. .++++||||+++||++.+
T Consensus 215 ~d~~~~~~~~~~lfGDGA~A~vl~~~~ 241 (402)
T 3awk_A 215 SETHLDGLVGSALFGDGAAALIVGSDP 241 (402)
T ss_dssp CTTCHHHHHHHHHBCCEEEEEEEESSC
T ss_pred CccCHHHhhccccccCceEEEEEecCC
Confidence 44433 388999999999998754
No 61
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.32 E-value=8.6e-12 Score=124.98 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=115.7
Q ss_pred CcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 165 ~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
..|.|+|+|...|.- .+.+++.+.+ +.+ +.| +. ...| .....+..+.+ ...|+.+++
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~-----~~~----i~-~~~G----i~~R~~a~~~e------~~~La~~Aa 60 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMM--DTS-----AAW----IH-SRTG----ISERRIVTQEN------TSDLCHQVA 60 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHT--TSC-----HHH----HH-HHHS----CSEEECCSSCC------HHHHHHHHH
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHh--CCC-----hhh----hh-hhcC----ceEEEECCCCC------HHHHHHHHH
Confidence 469999999999997 5777776653 111 000 00 0000 00000111111 577999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-Cccee
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 322 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gps~t 322 (470)
++||+++|++++ +++ .|++|+...++ ..+ ..+.+++..+|++ .|.+.
T Consensus 61 ~~aL~~ag~~~~---~Id----~li~~t~~~~~--------------------~~p-----~~a~~v~~~lGl~~~~~~~ 108 (321)
T 3il6_A 61 KQLLEKSGKQAS---EID----FILVATVTPDF--------------------NMP-----SVACQVQGAIGATEAFAFD 108 (321)
T ss_dssp HHHHHHHTCCGG---GCC----EEEEECSSCSC--------------------SSS-----CHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHcCCCHH---HCC----EEEEEeCCCCc--------------------CCC-----cHHHHHHHHcCCCCceEEE
Confidence 999999999986 333 68888764221 111 2578899999997 68999
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|+.+|+|++.||..|+++|++|.++.+||+|+|.+ +.. +. + +.....+++|+|++++
T Consensus 109 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~----------~~-----~-------~dr~~~~lfGDGA~A~ 165 (321)
T 3il6_A 109 ISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETF-SKM----------LD-----W-------TDRSTAVLFGDGAAGV 165 (321)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECG-GGG----------SC-----T-------TCTTTGGGBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------CC-----c-------cccccceeeccccEEE
Confidence 99999999999999999999999999999999983 211 11 1 1112457899999999
Q ss_pred eeccch
Q 012130 403 LLEELE 408 (470)
Q Consensus 403 vLe~l~ 408 (470)
||++.+
T Consensus 166 vl~~~~ 171 (321)
T 3il6_A 166 LIEAAE 171 (321)
T ss_dssp EEEEES
T ss_pred EEEEcC
Confidence 999744
No 62
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.30 E-value=1.8e-12 Score=134.44 Aligned_cols=126 Identities=13% Similarity=0.072 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHH
Q 012130 233 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (470)
Q Consensus 233 dp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~ 312 (470)
.....|+.+++.+||+++|++++ +++ .|++++..+ +.. ...+..|+.
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~---dId----~li~~t~~~---------------------~~~-----p~~a~~v~~ 164 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKS---EIT----HIVMATTSG---------------------VNM-----PGAELATAK 164 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGG---GCC----EEEEEESSC---------------------CCB-----SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHH---HCC----EEEEEecCC---------------------ccc-----CcHHHHHHH
Confidence 45678999999999999999876 333 577777531 111 125789999
Q ss_pred HhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCC
Q 012130 313 DLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 389 (470)
Q Consensus 313 ~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~ 389 (470)
.+|+.+. .+.|..+|+|++.||..|.++|++|.++.+||+|+|.+ +... .. +. .++|+..
T Consensus 165 ~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~sg~~~~vLvvg~E~~-s~~~---------~~-----~~--d~~~~~~ 227 (413)
T 2p0u_A 165 LLGLRPNVRRVMMYQQGAFAGATVLRVAKDLAENNAGARVLAICSEVT-AVTF---------RA-----PS--ETHIDGL 227 (413)
T ss_dssp HHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECS-TTTC---------CC-----CC--TTCHHHH
T ss_pred HhCCCCCcceEeEECCccHHHHHHHHHHHHHHHhCCCCEEEEEEEhhc-chhc---------cC-----CC--ccChhhh
Confidence 9999874 78999999999999999999999999999999999973 2210 11 11 1345545
Q ss_pred CCcceecceeEeEeeccch
Q 012130 390 RDGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 390 adG~v~GEGagalvLe~l~ 408 (470)
..++++||||+++||++.+
T Consensus 228 ~~~~lfGDGA~A~vl~~~~ 246 (413)
T 2p0u_A 228 VGSALFGDGAAAVIVGSDP 246 (413)
T ss_dssp HHHHHBCCEEEEEEEESSC
T ss_pred cccceeecccEEEEEecCC
Confidence 5789999999999998754
No 63
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.27 E-value=1.5e-11 Score=125.38 Aligned_cols=174 Identities=18% Similarity=0.231 Sum_probs=115.5
Q ss_pred CCCCCCcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHH
Q 012130 160 PHMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLY 238 (470)
Q Consensus 160 ~~~~~~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl 238 (470)
|.+..+.|.|+|+|...|.- .+.+++.+.+. +.+ ...+. ...+...+ .+..+. .....|
T Consensus 24 ~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-~~~i~--~~tGI~~R-----------~~a~~~-----~~~~~L 83 (365)
T 3gwa_A 24 PAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-AEKIL--AKTGIRER-----------RIAAPR-----ETAADL 83 (365)
T ss_dssp -----CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-HHHHH--HHHCCCEE-----------EECCTT-----CCHHHH
T ss_pred ccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-HHHHH--HhcCccEE-----------EECCCC-----CCHHHH
Confidence 34556789999999999997 67777776541 110 00000 00000000 000111 124679
Q ss_pred HHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCC-
Q 012130 239 LLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM- 317 (470)
Q Consensus 239 ~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~- 317 (470)
+.+++.+||+++|++++ +++ .|++++..+++ ..+ ..+.+++..+|+.
T Consensus 84 a~~Aa~~aL~~ag~~~~---~Id----~vi~~t~~~~~--------------------~~p-----~~a~~v~~~lGl~~ 131 (365)
T 3gwa_A 84 AYEAARKLFAQGAVGAD---QVD----FVILCTQAPDY--------------------VLP-----TSACMLQHRLGIPT 131 (365)
T ss_dssp HHHHHHHHHHTTSCCGG---GCC----EEEEEESSCSC--------------------SBS-----CHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHcCCCHH---HCC----EEEEEeCCCCC--------------------CCC-----cHHHHHHHHcCCCC
Confidence 99999999999999987 333 57888763221 111 2478899999997
Q ss_pred -CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceec
Q 012130 318 -GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 396 (470)
Q Consensus 318 -Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~G 396 (470)
.|.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+.... . +. | ....+++|
T Consensus 132 ~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~-----~~------d-r~~~~lfG 188 (365)
T 3gwa_A 132 HAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL-----------H-----PL------D-KSVRTLFG 188 (365)
T ss_dssp TSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS-----------C-----TT------C-HHHHTTBC
T ss_pred CceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC-----------C-----cc------c-cccccccc
Confidence 78999999999999999999999999999999999999832211 0 11 1 11356799
Q ss_pred ceeEeEeeccch
Q 012130 397 EGAGVLLLEELE 408 (470)
Q Consensus 397 EGagalvLe~l~ 408 (470)
+||+++||++.+
T Consensus 189 DGAaA~vl~~~~ 200 (365)
T 3gwa_A 189 DGASATAVIAEH 200 (365)
T ss_dssp CEEEEEEEEEEC
T ss_pred ceeEEEEEEecC
Confidence 999999999743
No 64
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.21 E-value=6.4e-11 Score=121.71 Aligned_cols=128 Identities=15% Similarity=0.113 Sum_probs=94.8
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHH
Q 012130 231 RMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAML 310 (470)
Q Consensus 231 ~mdp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 310 (470)
.++....|+.+|+.+||+++|++++ +++ .|++++..+ +.. ...+.+|
T Consensus 92 ~~~~~~~La~~Aa~~AL~~ag~~~~---dId----~li~~t~t~---------------------~~~-----p~~a~~v 138 (387)
T 3oit_A 92 AADAVPELAAEAAKKAIAEWGRPAA---DIT----HLVVTTNSG---------------------AHV-----PGVDFRL 138 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGG---GCC----EEEEEESSC---------------------CEE-----SCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeeCC---------------------CCc-----ccHHHHH
Confidence 3346778999999999999999986 333 678887632 111 1357889
Q ss_pred HHHhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCC
Q 012130 311 AMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387 (470)
Q Consensus 311 s~~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd 387 (470)
+..+|+.+. .+.+..+|++++.||..|.++|++|.++.+||+|+|.+... ... ++. +.++
T Consensus 139 ~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------~~~-----~~d--~~~~ 201 (387)
T 3oit_A 139 VPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMY----------FTG-----PDE--GCFR 201 (387)
T ss_dssp HHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGT----------CCC-----CCS--SSCH
T ss_pred HHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchh----------ccC-----ccc--cchH
Confidence 999999874 68999999999999999999999999999999999983210 000 110 1111
Q ss_pred CCCCcceecceeEeEeeccch
Q 012130 388 INRDGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 388 ~~adG~v~GEGagalvLe~l~ 408 (470)
.....+++|+||+++||++.+
T Consensus 202 ~~~~~~lFGDGAaA~vl~~~~ 222 (387)
T 3oit_A 202 TLLVQGLFGDGAAAVIVGADA 222 (387)
T ss_dssp HHHHHHHBCCEEEEEEEESSC
T ss_pred hhhcccccccceEEEEEecCC
Confidence 112467899999999999744
No 65
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.20 E-value=1.3e-11 Score=127.07 Aligned_cols=126 Identities=17% Similarity=0.159 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHH
Q 012130 233 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (470)
Q Consensus 233 dp~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~ 312 (470)
+....|+.+|+++||+++|++++ +++ .|++++..+ +.. ...+.+|+.
T Consensus 100 ~~~~~La~~Aa~~aL~~ag~~~~---dId----~vi~~t~t~---------------------~~~-----p~~a~~v~~ 146 (393)
T 3ov2_A 100 EEIPRLAKEAAEKAIKEWGRPKS---EIT----HLVFCSISG---------------------IDM-----PGADYRLAT 146 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGG---GCC----EEEEEESSC---------------------CCB-----SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEEeCC---------------------CCC-----CCHHHHHHH
Confidence 45678999999999999999986 333 578887632 111 235788999
Q ss_pred HhCCCCc---ceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCC
Q 012130 313 DLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 389 (470)
Q Consensus 313 ~~gl~Gp---s~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~ 389 (470)
.+|+.+. .+.|..+|++++.||..|.++|++|.++.+||+|+|.+.. .... |+. +.++..
T Consensus 147 ~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~~~-----~~d--~~~~~~ 209 (393)
T 3ov2_A 147 LLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVL----------SFRG-----PNE--GDFEAL 209 (393)
T ss_dssp HHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGG----------TCCC-----CCT--TCHHHH
T ss_pred HcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch----------hccC-----Ccc--cchhhh
Confidence 9999875 6899999999999999999999999999999999998321 0011 111 011111
Q ss_pred CCcceecceeEeEeeccch
Q 012130 390 RDGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 390 adG~v~GEGagalvLe~l~ 408 (470)
...+++|+||+++||++.+
T Consensus 210 ~~~~lFGDGAaA~vl~~~~ 228 (393)
T 3ov2_A 210 AGQAGFGDGAGAVVVGADP 228 (393)
T ss_dssp HHHHHBCCEEEEEEEESSC
T ss_pred cccccccCccEEEEEEecC
Confidence 2467899999999999754
No 66
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.18 E-value=4.4e-10 Score=117.71 Aligned_cols=163 Identities=14% Similarity=0.085 Sum_probs=110.8
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa~ 244 (470)
.|.|.|+|..+|.- .+.+++-+.+ |.+ +. .+...+ | +..+ .+..+. . ....|+.+|+.
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~--g~~-----~~----~~~~g~-G-~~~~---~~~~~~----e-~~~~La~~Aa~ 61 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHD--GAS-----KG----KYTIGL-G-QDCL---AFCTEL----E-DVISMSFNAVT 61 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TT----TTTTTS-C-CCEE---ECCCTT----C-CHHHHHHHHHH
T ss_pred ceEEEEEEEECCCeeccHHHHHHHh--CCC-----HH----Hhhhhh-C-ceee---eeCCCC----C-CHHHHHHHHHH
Confidence 58999999999987 5677765542 221 11 110000 1 0000 000111 1 24579999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCC----CCcc
Q 012130 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW----MGPN 320 (470)
Q Consensus 245 eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl----~Gps 320 (470)
+||+++|++++.+ + .|++|+..+.+ .....+..|+..||+ ..+.
T Consensus 62 ~aL~~agi~~~~I---d----~li~~t~t~~~-------------------------~~p~~a~~v~~~lgl~g~~~~~~ 109 (450)
T 2f82_A 62 SLLEKYKIDPKQI---G----RLEVGSETVID-------------------------KSKSIKTFLMQLFEKCGNTDVEG 109 (450)
T ss_dssp HHHHHTTCCGGGE---E----EEEEECCCCSC-------------------------SSSCHHHHHTHHHHTTTCCCCBC
T ss_pred HHHHHcCcCHHHC---C----EEEEEecCCCC-------------------------CCCcHHHHHHHHhCCcCCCCceE
Confidence 9999999987522 2 45567663211 012357888888898 3688
Q ss_pred eeecCCCchHHHHHHHHHHHHHcCCC--CEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecce
Q 012130 321 YSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (470)
Q Consensus 321 ~tV~tACsSsl~AI~~A~~~Lr~G~~--d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEG 398 (470)
+.|..+|+|++.||..|.++|++|.+ +.+||+|+|.+. .+ ...++.+.|||
T Consensus 110 ~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~-------------~~--------------~~~~~~~fGDG 162 (450)
T 2f82_A 110 VDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV-------------YA--------------EGPARPTGGAA 162 (450)
T ss_dssp CEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC-------------CS--------------SSTTGGGCEEE
T ss_pred EEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc-------------cc--------------CCCCCcccccc
Confidence 99999999999999999999999998 999999999731 11 12367889999
Q ss_pred eEeEeeccch
Q 012130 399 AGVLLLEELE 408 (470)
Q Consensus 399 agalvLe~l~ 408 (470)
|+++||++.+
T Consensus 163 A~A~ll~~~~ 172 (450)
T 2f82_A 163 AIAMLIGPDA 172 (450)
T ss_dssp EEEEEEESSC
T ss_pred eEEEEeccCC
Confidence 9999998643
No 67
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.17 E-value=2.8e-10 Score=114.10 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+.+++++||+++|++++ +++ .|++|+..+++ .. + ..+.+++..+
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~---~Id----~vi~~t~~~~~--------------------~~----p-~~a~~v~~~l 105 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQ---DIE----LIIVATTSHSH--------------------AY----P-SAACQVQGLL 105 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGG---GCC----EEEEECSCCSC--------------------SS----S-CHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeCCCCC--------------------CC----c-cHHHHHHHHh
Confidence 467999999999999999986 333 68888764321 11 1 2578899999
Q ss_pred CCC-CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcc
Q 012130 315 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (470)
Q Consensus 315 gl~-Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~ 393 (470)
|++ .|.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+... +. + +.....+
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~~-----~-------~d~~~~~ 162 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK-----------LD-----E-------TDRSTVV 162 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-----------CC-----T-------TCTTTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc-----------cC-----c-------ccccccc
Confidence 995 6899999999999999999999999999999999999973210 10 1 1112467
Q ss_pred eecceeEeEeeccch
Q 012130 394 VMGEGAGVLLLEELE 408 (470)
Q Consensus 394 v~GEGagalvLe~l~ 408 (470)
++|+||+++||++.+
T Consensus 163 lfGDGA~A~vl~~~~ 177 (323)
T 3il3_A 163 LFGDGAGAVILEASE 177 (323)
T ss_dssp TBCEEEEEEEEEEES
T ss_pred ccccceEEEEEEEcC
Confidence 899999999999743
No 68
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.16 E-value=6.4e-10 Score=113.00 Aligned_cols=121 Identities=19% Similarity=0.138 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 234 p~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
....|+.+++.+||+++|++++.+ + .|++++.... .|... ..+.+++..
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dI---d----~vi~~t~~~~------------------~~d~~------~~a~~v~~~ 101 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADV---S----LVLHSSLWFQ------------------GIDLW------PAASYVAHE 101 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGE---E----EEEEECSSCC------------------SSSSS------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHC---C----EEEEEeccCC------------------Ccccc------cHHHHHHHH
Confidence 356799999999999999988633 2 4677765200 11000 247789999
Q ss_pred hCCC-CcceeecCCCchHHHHHHHHHHHHHcCCCC--EEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCC
Q 012130 314 LGWM-GPNYSISTACATSNFCILNAANHIIRGEAN--VMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (470)
Q Consensus 314 ~gl~-Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d--~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~a 390 (470)
+|+. .|.+.|+.+|+|++.||..|.++|++|.++ .+||+|+|.+..+. + ..|+ ++
T Consensus 102 lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------~-----------~~~~-~~ 159 (357)
T 3s3l_A 102 AVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------I-----------DRWN-SV 159 (357)
T ss_dssp HTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------C-----------CTTT-SS
T ss_pred hCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------c-----------cccc-cc
Confidence 9996 488999999999999999999999999999 99999999832111 1 1122 23
Q ss_pred CcceecceeEeEeeccc
Q 012130 391 DGFVMGEGAGVLLLEEL 407 (470)
Q Consensus 391 dG~v~GEGagalvLe~l 407 (470)
..+++||||+++||++.
T Consensus 160 ~~~lfGDGA~A~vl~~~ 176 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTR 176 (357)
T ss_dssp SSCCBCCEEEEEEEESS
T ss_pred CCcccccccEEEEEecC
Confidence 57899999999999974
No 69
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.13 E-value=5.5e-10 Score=113.59 Aligned_cols=121 Identities=17% Similarity=0.255 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+.+++.+||+++|++++ +++ .|++|+..+++ ..+ ..+.+++..+
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~---dId----~vi~~t~~~~~--------------------~~p-----~~a~~v~~~l 121 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPE---DID----LLLVNTLSPDH--------------------HDP-----SQACLIQPLL 121 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGG---GCC----EEEEECSSCSS--------------------SBS-----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHH---HCC----EEEEEeCCCCC--------------------CCC-----cHHHHHHHHc
Confidence 357999999999999999986 333 68888764211 111 2578899999
Q ss_pred CCC-CcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcc
Q 012130 315 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (470)
Q Consensus 315 gl~-Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~ 393 (470)
|+. .|.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+... +. +.... ....+
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-----------~~-----~~d~~-----~~t~~ 180 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKR-----------MD-----CSDRG-----RNLSI 180 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGG-----------CC-----CSTTT-----HHHHT
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhccc-----------CC-----ccccc-----ccccc
Confidence 996 4899999999999999999999999999999999999973211 11 11000 11346
Q ss_pred eecceeEeEeeccch
Q 012130 394 VMGEGAGVLLLEELE 408 (470)
Q Consensus 394 v~GEGagalvLe~l~ 408 (470)
++|+||+++||++.+
T Consensus 181 lfGDGAaA~vl~~~~ 195 (359)
T 3h78_A 181 LLGDGAGAVVVSAGE 195 (359)
T ss_dssp TBCEEEEEEEEECCS
T ss_pred eecceeEEEEEEecC
Confidence 799999999999743
No 70
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.11 E-value=2.6e-10 Score=115.73 Aligned_cols=119 Identities=21% Similarity=0.246 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+.+++.+||+++|++++ +++ .|++|+..+++ .. ...+.+++..+
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~---~Id----~vi~~t~~~~~--------------------~~-----p~~a~~v~~~l 113 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQAD---SID----ALIFVSQTPNY--------------------RL-----PATAFVLQAEL 113 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSSCSC--------------------SS-----SCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeCCCCC--------------------CC-----CcHHHHHHHHc
Confidence 457999999999999999986 333 68888764321 11 13478899999
Q ss_pred CC--CCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCc
Q 012130 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (470)
Q Consensus 315 gl--~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG 392 (470)
|+ ..|.+.|..+|+|++.||..|.++|++|.++.+||+|+|.+. .. +. ++ | ....
T Consensus 114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~----------~~-----~~------d-~~~~ 170 (354)
T 4efi_A 114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTIS-KM----------ID-----PT------D-RSTS 170 (354)
T ss_dssp TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GG----------CC-----TT------C-HHHH
T ss_pred CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhc-cc----------CC-----cc------c-cccc
Confidence 99 478999999999999999999999999999999999999832 11 10 11 1 1235
Q ss_pred ceecceeEeEeeccch
Q 012130 393 FVMGEGAGVLLLEELE 408 (470)
Q Consensus 393 ~v~GEGagalvLe~l~ 408 (470)
+++|+|++++||++.+
T Consensus 171 ~lfGDGA~A~vl~~~~ 186 (354)
T 4efi_A 171 LLFGDAGTMTALETSN 186 (354)
T ss_dssp TTBCCEEEEEEEEECC
T ss_pred cccccceeEEEEeecC
Confidence 7899999999999743
No 71
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.00 E-value=1.4e-09 Score=111.33 Aligned_cols=128 Identities=12% Similarity=0.097 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 234 p~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
....|+.+|+.+||+++|++++ +++ .|+++++. ++ ..+ ..+.+|...
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~---dId----~li~~t~t-~~--------------------~~p-----~~a~~v~~~ 126 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPA---QIT----HMVSTTCT-DS--------------------ANP-----GYDHYVAKE 126 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSS-CC--------------------CSS-----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEecC-CC--------------------CCC-----CHHHHHHHH
Confidence 3457999999999999999986 333 57777764 21 111 247889999
Q ss_pred hCCCCc--ceee-cCCCchHHHHHHHHHHHHHc----CCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCC
Q 012130 314 LGWMGP--NYSI-STACATSNFCILNAANHIIR----GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386 (470)
Q Consensus 314 ~gl~Gp--s~tV-~tACsSsl~AI~~A~~~Lr~----G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpF 386 (470)
+|+++. .+.| ..+|++++.||..|.++|++ |.++.+||+|+|.+ +...-....... ...
T Consensus 127 LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~a~~~~G~~~~vLvv~~E~~-s~~~~~~~~~~~-------------~~~ 192 (379)
T 3euo_A 127 LGLSDRLEKVLLHGIGASGGLAALRTAANLCLGHTARGKPARILVLALEVS-TTMVRSELESID-------------ALQ 192 (379)
T ss_dssp HTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECC-GGGHHHHHHHHH-------------HHC
T ss_pred cCCCCCeeEEEeeCchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEEEee-hhhhcCcccccc-------------ccH
Confidence 999873 5888 79999999999999999997 99999999999983 333211111000 001
Q ss_pred CCCCCcceecceeEeEeeccch
Q 012130 387 DINRDGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 387 d~~adG~v~GEGagalvLe~l~ 408 (470)
+.....+++|+||+++||++.+
T Consensus 193 ~d~~~~~LFGDGAaAvvl~~~~ 214 (379)
T 3euo_A 193 ETRIGIALFSDCASAVILSNGI 214 (379)
T ss_dssp CCCCHHHHBCCEEEEEEEECCT
T ss_pred HHhhcceeecCccEEEEEecCC
Confidence 1123467899999999999754
No 72
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=98.99 E-value=3.7e-09 Score=106.79 Aligned_cols=118 Identities=25% Similarity=0.450 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+.+|+.+||+++|++++ +++ .|++++..+++ ..| ..+.+|...|
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~---dId----~li~~t~t~~~--------------------~~P-----~~a~~v~~~L 109 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGS---DLD----AVIVSTVTFPH--------------------ATP-----SAAALVAHEI 109 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG---GCS----EEEEECSCCSC--------------------SSS-----CHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeccCCC--------------------CCC-----chHHHHHHHh
Confidence 346999999999999999987 333 46777664221 111 2478899999
Q ss_pred CCCC-cceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcc
Q 012130 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (470)
Q Consensus 315 gl~G-ps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~ 393 (470)
|++. +++.|..+|++++.||..|.++|++|..+.+||.++|.+ +.. +. +.| ....+
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~-s~~----------~d-----------~~~-~~~~~ 166 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERL-SDV----------VD-----------PTD-RSISF 166 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGG----------CC-----------TTC-TTTGG
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeec-eec----------cc-----------ccc-ccccc
Confidence 9974 788899999999999999999999999999999999972 111 11 111 23467
Q ss_pred eecceeEeEeeccc
Q 012130 394 VMGEGAGVLLLEEL 407 (470)
Q Consensus 394 v~GEGagalvLe~l 407 (470)
++|+|++++||++.
T Consensus 167 lfgDGA~A~vl~~~ 180 (350)
T 4ewp_A 167 LLGDGAGAVIVAAS 180 (350)
T ss_dssp GBCEEEEEEEEEEE
T ss_pred ccccchheeeeecc
Confidence 89999999999864
No 73
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=98.92 E-value=5.7e-09 Score=109.48 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhC
Q 012130 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (470)
Q Consensus 236 ~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g 315 (470)
..|+.+|+.+||+++|++++ +++ .|+++++. ++ ..+ ..+.+|...||
T Consensus 111 ~~La~~Aa~~AL~~agi~~~---dId----~li~~t~t-~~--------------------~~P-----~~a~~v~~~LG 157 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPA---QIT----HMVSTTCT-DS--------------------ANP-----GYDHYVAKELG 157 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGG---GCC----EEEEECSS-CC--------------------CSS-----CHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeeC-CC--------------------CCC-----cHHHHHHHHhC
Confidence 47999999999999999986 333 57777763 11 111 24788999999
Q ss_pred CCC-c-ceee-cCCCchHHHHHHHHHHHHHc----CCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCC
Q 012130 316 WMG-P-NYSI-STACATSNFCILNAANHIIR----GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (470)
Q Consensus 316 l~G-p-s~tV-~tACsSsl~AI~~A~~~Lr~----G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~ 388 (470)
++. + .+.| ..+|++++.||..|.++|++ |.++.+||+|+|.+ +...-....... ...+.
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~-S~~~~~~~~~~~-------------~~~~d 223 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVS-TTMVRSELESID-------------ALQET 223 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECC-GGGHHHHHHHHH-------------HHTCC
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeec-chhcCccccccc-------------ccccc
Confidence 986 4 5788 79999999999999999997 99999999999984 332211111000 01111
Q ss_pred CCCcceecceeEeEeeccch
Q 012130 389 NRDGFVMGEGAGVLLLEELE 408 (470)
Q Consensus 389 ~adG~v~GEGagalvLe~l~ 408 (470)
....+++|+||+++||++.+
T Consensus 224 ~~t~~LFGDGAaAvVl~~~~ 243 (465)
T 3e1h_A 224 RIGIALFSDCASAVILSNGI 243 (465)
T ss_dssp CCHHHHBCCEEEEEEEECCT
T ss_pred cccccccccceeEEEEEccC
Confidence 23567899999999999743
No 74
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=98.91 E-value=7.3e-09 Score=107.12 Aligned_cols=120 Identities=18% Similarity=0.138 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHH
Q 012130 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (470)
Q Consensus 234 p~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 313 (470)
....|+.+|+.+||+++|++++ +++ .|+++++.+ +.. ...+.+|+..
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~---dId----~li~~t~t~---------------------~~~-----P~~a~~v~~~ 182 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVA---DVD----CLITSNSTT---------------------PAL-----PGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGG---GCC----EEEEECCSS---------------------CCS-----SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHH---HCC----EEEEEccCC---------------------CCc-----CHHHHHHHHH
Confidence 4557999999999999999986 333 688887632 111 1247889999
Q ss_pred hCCCC--cceee-cCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCC
Q 012130 314 LGWMG--PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (470)
Q Consensus 314 ~gl~G--ps~tV-~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~a 390 (470)
+|+.. +.+.| ..+|++++.||..|.++|++|.++.+||+|+|.+. .. + ++-|.+.
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S-~~----------~-----------~~~d~~~ 240 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALS-TT----------Y-----------QPADDTL 240 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGG-GG----------C-----------CSSCCST
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccc-cc----------c-----------Cccccch
Confidence 99987 35777 99999999999999999999999999999999832 11 0 1111111
Q ss_pred C----cceecceeEeEeeccch
Q 012130 391 D----GFVMGEGAGVLLLEELE 408 (470)
Q Consensus 391 d----G~v~GEGagalvLe~l~ 408 (470)
+ ..++|+||+++||++.+
T Consensus 241 ~~lv~~~LFGDGAaAvvl~~~~ 262 (413)
T 3v7i_A 241 ESLIVRLLFADTAVAAVVTGRP 262 (413)
T ss_dssp THHHHHHHBCCEEEEEEEESSC
T ss_pred hhhhcceeeccccEEEEEEecC
Confidence 1 67899999999998743
No 75
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=98.81 E-value=2.5e-08 Score=104.09 Aligned_cols=139 Identities=13% Similarity=0.085 Sum_probs=94.6
Q ss_pred CcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 165 ~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
+.|.|+|+|...|.- .+.+++-+.+ |.+.+. +...++ +..+ .+..+.| ...-|+.+|+
T Consensus 4 ~~vgI~gig~ylP~~~v~n~el~~~~--g~~~~~---------~~~Gig--~r~~---~va~~~E-----~~~~La~~Aa 62 (460)
T 2v4w_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVEAGK---------YTVGLG--QTRM---GFCSVQE-----DINSLCLTVV 62 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCCTTC---------CCCCCC--CCEE---ECCCTTC-----CHHHHHHHHH
T ss_pred CceEEEEEEEECCCcEecHHHHHHHh--CCCHHH---------eeeeee--eEEE---EECCCCC-----CHHHHHHHHH
Confidence 478999999999997 5777765542 322111 110000 0000 0001111 2456999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCCC----c
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG----P 319 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G----p 319 (470)
.+||+++|++++.+ + .|++|+..+.+ .. ...+..|...||+.| +
T Consensus 63 ~~AL~~agi~~~dI---d----~IivaT~t~~~--------------------~~-----ps~A~~v~~~LGl~g~~~~~ 110 (460)
T 2v4w_A 63 QRLMERIQLPWDSV---G----RLEVGTETIID--------------------KS-----KAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHTCCGGGE---E----EEEEECSCCSC--------------------SS-----SCHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHcCCCHHHC---C----EEEEEecCCCC--------------------CC-----CcHHHHHHHHhCCCCCCCcE
Confidence 99999999998633 2 47777763221 11 124678899999843 6
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCCC--CEEEEeeecC
Q 012130 320 NYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDA 356 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~~--d~aLvGGvd~ 356 (470)
++.|..+|++++.||..|.++|++|.+ +.+||.|+|.
T Consensus 111 a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~ 149 (460)
T 2v4w_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI 149 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred EEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccc
Confidence 788999999999999999999999996 9999999997
No 76
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=98.79 E-value=1.2e-08 Score=104.68 Aligned_cols=160 Identities=13% Similarity=0.103 Sum_probs=108.0
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa~ 244 (470)
.|.|+|+|..+|.- .+.+++-+.+ |.+. .|-... .| +.. ..+..+.| ....|+.+|+.
T Consensus 7 ~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~-----~~~~~~-----~G-i~~---r~~~~~~e-----~~~~La~~Aa~ 65 (388)
T 3v4n_A 7 TIGIDKISFFVPPYYIDMTALAEAR--NVDP-----GKFHIG-----IG-QDQ---MAVNPISQ-----DIVTFAANAAE 65 (388)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT--TSCT-----HHHHTT-----TC-CCE---EECCCTTC-----CHHHHHHHHHH
T ss_pred eEEEEEEEEECCCeEEcHHHHHHHh--CCCH-----HHHHHH-----hC-ceE---EEECCCCC-----CHHHHHHHHHH
Confidence 79999999999996 5777765543 2110 000000 00 000 00001111 24578999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCCC--ccee
Q 012130 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNYS 322 (470)
Q Consensus 245 eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G--ps~t 322 (470)
+||+++| ++ +++ .|++|+..+++ .. ...+..|+..||+.+ +.+.
T Consensus 66 ~aL~~a~--~~---~Id----~li~~t~t~~~--------------------~~-----ps~a~~v~~~LGl~~~~~~~d 111 (388)
T 3v4n_A 66 AILTKED--KE---AID----MVIVGTESSID--------------------ES-----KAAAVVLHRLMGIQPFARSFE 111 (388)
T ss_dssp TTCCHHH--HH---HEE----EEEEECSSCSB--------------------SS-----SCHHHHHHHHTTCCSSCEEEE
T ss_pred HHHHhCC--cc---cCC----EEEEEeccCCC--------------------cC-----ccHHHHHHHHcCCCCCceEee
Confidence 9999987 43 222 57777764221 01 134788999999986 8889
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|..+|++++.||..|.++|++|.++.+||+|+|.+.. -++ ..+.+..|+||+++
T Consensus 112 v~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~-------------------------~~~-~~~~~lfGDGA~A~ 165 (388)
T 3v4n_A 112 IKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY-------------------------GLN-SGGEPTQGAGAVAM 165 (388)
T ss_dssp EESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC-------------------------CTT-CTTGGGCEEEEEEE
T ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc-------------------------cCC-CCCCCccccceeEE
Confidence 9999999999999999999999999999999997311 011 12357899999999
Q ss_pred eecc
Q 012130 403 LLEE 406 (470)
Q Consensus 403 vLe~ 406 (470)
||++
T Consensus 166 ll~~ 169 (388)
T 3v4n_A 166 LVSS 169 (388)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 9987
No 77
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=98.76 E-value=1.2e-07 Score=94.93 Aligned_cols=122 Identities=20% Similarity=0.156 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHh
Q 012130 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (470)
Q Consensus 235 ~~rl~L~aa~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 314 (470)
...|+.+|+.+||++||++++ +++ .|++|+.. ++.. .+..+...+
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~---DID----~II~gt~t---------------------~q~~-------~A~~va~~L 99 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKE---DID----IFLAGDLL---------------------NQNV-------TANYVARHL 99 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGG---GCS----EEEEEESS---------------------SSST-------THHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHH---HCC----EEEEEeCC---------------------Cchh-------HHHHHHHHh
Confidence 356899999999999999987 343 57788753 1111 355566666
Q ss_pred CCCCcceeecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcce
Q 012130 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (470)
Q Consensus 315 gl~Gps~tV~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v 394 (470)
+ -|.+.|..+|+|++.||..|..+|++|.+|.+||+|+|.+........|. ...+..+|... -.
T Consensus 100 g--ipafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p----------~e~g~q~p~ta----~~ 163 (347)
T 3lma_A 100 K--IPFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYP----------TEYGGQKPGTA----TS 163 (347)
T ss_dssp C--CCEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC------------------------------
T ss_pred C--CCEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCc----------chhcccCCchh----cE
Confidence 4 38999999999999999999999999999999999999844322110000 01122333322 22
Q ss_pred ecceeEeEeeccc
Q 012130 395 MGEGAGVLLLEEL 407 (470)
Q Consensus 395 ~GEGagalvLe~l 407 (470)
.++|+|++||++.
T Consensus 164 t~dGAGA~VL~~~ 176 (347)
T 3lma_A 164 TVTGSGAVVLSQQ 176 (347)
T ss_dssp CCCEEEEEEEESS
T ss_pred EccceeEEEEEec
Confidence 4589999999963
No 78
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=98.67 E-value=1.8e-07 Score=98.45 Aligned_cols=163 Identities=15% Similarity=0.143 Sum_probs=106.3
Q ss_pred CcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 165 ~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
..|.|.|+|+.+|.- .+.+++.+.. |.+. . .+. ...| +..+ .+..+. .....|+.+|+
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~--g~~~-----~----~~~-~~~G-i~~r---~~~~~~-----e~~~~La~~Aa 81 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYD--GVDA-----G----KYT-IGLG-QAKM---GFCTDR-----EDINSLCMTVV 81 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHH--TCCT-----T----CCC-CCCC-CCEE---ECCCTT-----CCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeEecHHHHHHHh--CCCh-----h----Hhe-cccC-ceEE---EeCCCC-----CCHHHHHHHHH
Confidence 469999999999986 5777776543 2210 1 110 0011 1100 001111 12457999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCC---CC-c
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW---MG-P 319 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl---~G-p 319 (470)
.+||+++|++++.++ .|++|+..+.+. ....+..|...|+. .+ +
T Consensus 82 ~~aL~~agi~~~dId-------~li~~T~t~~~~-------------------------~ps~a~~v~~~L~~lG~~~~~ 129 (478)
T 2p8u_A 82 QNLMERNNLSYDCIG-------RLEVGTETIIDK-------------------------SKSVKTNLMQLFEESGNTDIE 129 (478)
T ss_dssp HHHHHHTTCCGGGEE-------EEEEECSCCSCS-------------------------SSCHHHHHGGGTTTTTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEccCCccc-------------------------CccHHHHHHHHHhhcCCCCce
Confidence 999999999876222 466776642210 11235667755554 32 6
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCC--CCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecc
Q 012130 320 NYSISTACATSNFCILNAANHIIRGE--ANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~--~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GE 397 (470)
.+.|..+|++++.||..|.++|++|. .+.+||.|+|.. . |+........|+
T Consensus 130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia---------------~------------~~~~~~~~~fGd 182 (478)
T 2p8u_A 130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA---------------V------------YATGNARPTGGV 182 (478)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE---------------C------------CCSSTTGGGCEE
T ss_pred EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee---------------c------------ccCCCCCCcccc
Confidence 78899999999999999999999999 999999999941 0 011113467999
Q ss_pred eeEeEeeccc
Q 012130 398 GAGVLLLEEL 407 (470)
Q Consensus 398 GagalvLe~l 407 (470)
||+++||++.
T Consensus 183 GA~A~Ll~~~ 192 (478)
T 2p8u_A 183 GAVALLIGPN 192 (478)
T ss_dssp EEEEEEEESS
T ss_pred eeEEEEEecC
Confidence 9999999863
No 79
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=98.61 E-value=4e-08 Score=101.94 Aligned_cols=160 Identities=13% Similarity=0.103 Sum_probs=107.3
Q ss_pred cEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHHH
Q 012130 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (470)
Q Consensus 166 ~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa~ 244 (470)
.|.|+|+|..+|.- .+.+++.+.+ |.+. .|-... .| +.. ..+..+.| ....|+.+|+.
T Consensus 36 ~v~I~~ig~ylP~~~v~n~el~~~~--g~~~-----~~i~~~-----~G-i~~---r~~a~~~e-----~~~~La~~Aa~ 94 (425)
T 3sqz_A 36 RIGIDKIGFTSSQYVLNMKDLAEAR--GEDP-----QKFSKG-----LL-LNA---LSIAPITD-----DVVTLAAGSAN 94 (425)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHH--TCCH-----HHHHTT-----TC-CCE---EEECCTTS-----CHHHHHHHHHH
T ss_pred eEEEEEEEEECCCcEEcHHHHHHHh--CCCH-----HHHHHH-----cC-eEE---EEECCCCC-----CHHHHHHHHHH
Confidence 79999999999996 5777766543 2110 000000 00 000 00001111 24568999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCCC--ccee
Q 012130 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNYS 322 (470)
Q Consensus 245 eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G--ps~t 322 (470)
+||+++| ++ +++ .|++++..+++ .. ...+..|...||+.+ +.+.
T Consensus 95 ~aL~~ag--~~---dId----~li~~t~t~~~--------------------~~-----ps~a~~v~~~LGl~~~~~~~d 140 (425)
T 3sqz_A 95 EILTAED--KE---KID----MVILATESSVD--------------------QS-----KAGAVYVHSLLGIQPFARSFE 140 (425)
T ss_dssp TTCCHHH--HH---HEE----EEEEECSCCSC--------------------SS-----SCHHHHHHHHTTCCSSCEEEE
T ss_pred HHHHhCC--hh---hCC----EEEEEeccccc--------------------cc-----chHHHHHHHHhCCCCCeeEEE
Confidence 9999987 44 222 46777763221 11 124788999999986 8899
Q ss_pred ecCCCchHHHHHHHHHHHHHcCCCCEEEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecceeEeE
Q 012130 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (470)
Q Consensus 323 V~tACsSsl~AI~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GEGagal 402 (470)
|..+|++++.||..|.++|++|.++.+||+|+|.+.. .+| ..+.+..|+||+++
T Consensus 141 v~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~-------------------------~~~-~~~~~lfGDGA~A~ 194 (425)
T 3sqz_A 141 MKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKY-------------------------GIG-TPGESTQGAGSIAM 194 (425)
T ss_dssp ECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECC-------------------------CTT-SGGGGGCEEEEEEE
T ss_pred EcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhcc-------------------------cCC-CCCCCcccceeeEE
Confidence 9999999999999999999999999999999997321 111 12368899999999
Q ss_pred eecc
Q 012130 403 LLEE 406 (470)
Q Consensus 403 vLe~ 406 (470)
||++
T Consensus 195 ll~~ 198 (425)
T 3sqz_A 195 LVKK 198 (425)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 9997
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=98.25 E-value=2.2e-06 Score=89.79 Aligned_cols=163 Identities=14% Similarity=0.101 Sum_probs=101.9
Q ss_pred CcEEEEeecccCCCC-CCHHHHHHHHHcCCCcceeCCCCCCCCCCccccccccCCCCCCCCCccccccCCHHHHHHHHHH
Q 012130 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (470)
Q Consensus 165 ~~VaItGmg~~~P~g-~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~fi~p~ea~~mdp~~rl~L~aa 243 (470)
+.|-|.|+|..+|.- .+.+++-+.. |.+ ...+..+. | |. ...+.++.| | ..-|+.+|+
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~---------~~~i~~~~-G-i~---~r~~~~~~E----~-~~~ma~~Aa 62 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVE---------AGKYTVGL-G-QT---RMGFCSVQE----D-INSLCLTVV 62 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCC---------TTCCCCCC-C-CC---EEECCCTTC----C-HHHHHHHHH
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHh--CCC---------HHHHHHhh-C-cE---EEEECCCCC----C-HHHHHHHHH
Confidence 579999999999998 5667665432 111 11111111 1 00 000111222 2 345999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchhhHHHHHHHHHhhhhcCCCccccccchhhHHHHHHHHhCCCC----c
Q 012130 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG----P 319 (470)
Q Consensus 244 ~eALedAG~~~~~~~~~~~~rvGV~vG~~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~G----p 319 (470)
.+||+++|++++.++ -|+++|..+.+ ..+ ..+..|...||+.| +
T Consensus 63 ~~al~~a~i~~~~Id-------~ii~aT~t~~~--------------------~~p-----s~a~~v~~~l~~~g~~~~~ 110 (460)
T 2wya_A 63 QRLMERIQLPWDSVG-------RLEVGTETIID--------------------KSK-----AVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHTCCGGGEE-------EEEEECSCCSC--------------------SSS-----CHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCCC--------------------CCC-----chHHHHHHHHhccCCCCee
Confidence 999999999986222 36778764321 111 23677888888765 3
Q ss_pred ceeecCCCchHHHHHHHHHHHHHcCCCCE--EEEeeecCCcchhhhHHhhhcccccCCCCCCCCCCcCCCCCCCcceecc
Q 012130 320 NYSISTACATSNFCILNAANHIIRGEANV--MLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (470)
Q Consensus 320 s~tV~tACsSsl~AI~~A~~~Lr~G~~d~--aLvGGvd~~l~p~~~~~f~~~~~Ls~~~~~~~~~~rpFd~~adG~v~GE 397 (470)
++-+..||++++.||..|.++|++|..+. +|+++.+. +. |.........|+
T Consensus 111 a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~----------------~~-----------~~d~~~~~~~Gd 163 (460)
T 2wya_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI----------------AV-----------YPSGNARPTGGA 163 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE----------------EC-----------CCSSTTGGGCEE
T ss_pred EechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc----------------cc-----------cccccccccCcc
Confidence 57789999999999999999999998764 44444432 10 111223445699
Q ss_pred eeEeEeeccc
Q 012130 398 GAGVLLLEEL 407 (470)
Q Consensus 398 GagalvLe~l 407 (470)
|++++++++.
T Consensus 164 GA~A~l~~~~ 173 (460)
T 2wya_A 164 GAVAMLIGPK 173 (460)
T ss_dssp EEEEEEEESS
T ss_pred hHHhhhcccC
Confidence 9999999863
No 81
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=95.80 E-value=0.0019 Score=51.76 Aligned_cols=46 Identities=9% Similarity=0.076 Sum_probs=41.3
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.+..|.++ +|||+++|+++|++...|+. + |.+.+|++ ||...|+
T Consensus 41 i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~-l----~~~~l~~~-~ti~~la 87 (95)
T 2ju1_A 41 VRATTPFKELGFDSLAAVRLRNLLNAATGLR-L----PSTLVFDH-PNASAVA 87 (95)
T ss_dssp CCSSSCHHHHTCSSHHHHHHHHHHGGGTSSC-C----CTTHHHHC-SSHHHHH
T ss_pred CCCCCCHHHcCCcHHHHHHHHHHHHHHHCCC-C----ChhHHhcC-CCHHHHH
Confidence 4557889999 99999999999999999987 6 88889999 9998888
No 82
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=95.76 E-value=0.00099 Score=53.80 Aligned_cols=45 Identities=9% Similarity=0.098 Sum_probs=37.9
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
...+..|.++ +|||++||++||+...+|+. + |.+.+|.. |...|+
T Consensus 27 I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~-l----p~~~l~~~--Ti~~La 72 (91)
T 2cg5_B 27 VNLDSSLADLGLDALMSVEVRQTLERELNLV-L----SVREVRQL--TLRKLQ 72 (91)
T ss_dssp SCTTSBTTTTTCCHHHHHHHHHHHHHHHCCC-C----CHHHHHTC--BHHHHH
T ss_pred CCCCCCHHHhCCcchHHHHHHHHHHHHHCCC-C----CHHHHHhC--CHHHHH
Confidence 3456788899 99999999999999999998 7 88887773 777776
No 83
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=94.48 E-value=0.02 Score=52.92 Aligned_cols=47 Identities=6% Similarity=-0.025 Sum_probs=41.9
Q ss_pred CCCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 74 FSGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 74 ~~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+.+..|.++ +|||+++|+++|++...|+. + |.+.+|++ ||...|+
T Consensus 45 ~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~-l----~~~~~~~~-~Ti~~la 92 (212)
T 2l22_A 45 QIRDGSRFLELGLDSVIAAQWIREINKHYQLK-I----PADGIYTY-PVFKAFT 92 (212)
T ss_dssp SCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCC-C----CTTHHHHC-CBHHHHH
T ss_pred HcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCC-C----CHHHHHcC-CCHHHHH
Confidence 34557788899 99999999999999999988 7 88899999 9999998
No 84
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=94.07 E-value=0.016 Score=45.56 Aligned_cols=46 Identities=11% Similarity=0.148 Sum_probs=40.2
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCc--eEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGF--SSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~--t~~F~~~ptp~~la 126 (470)
.+.+..|.++ +|||.+++++++++...|+. + +. +.+|++ ||...|+
T Consensus 31 i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~-l----~~~~~~l~~~-~Tv~~la 79 (89)
T 2kr5_A 31 LTDDSNFADMGIDSLSSMVIGSRFREDLGLD-L----GPEFSLFIDC-TTVRALK 79 (89)
T ss_dssp CCTTCBHHHHTCCHHHHHHHHHHHHHTTCCC-C----CSSCCTTTSC-CBHHHHH
T ss_pred CCCCCCHHHcCccHHHHHHHHHHHHHHHCCC-C----CchHHHHHcC-CCHHHHH
Confidence 3457788899 99999999999999999988 6 77 788999 9998888
No 85
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=93.81 E-value=0.011 Score=46.33 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=39.8
Q ss_pred CCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
+.+..|.++ +|||.+++++++++...|+. + |.+.+|++ ||...|+
T Consensus 35 ~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~-i----~~~~~~~~-~ti~~la 80 (88)
T 2afd_A 35 DMEESFDNYDLNSSKALILLGRLEKWLGKE-L----NPVLIFNY-PTIAQLA 80 (88)
T ss_dssp CTTSCGGGTTCCSTHHHHHHHHHHHHTTSC-C----CGGGTTTC-CSHHHHH
T ss_pred CCCCCHHHcCccHHHHHHHHHHHHHHHCCC-c----CHHHHHhC-CCHHHHH
Confidence 456778889 99999999999999999987 6 88889999 9998888
No 86
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=93.27 E-value=0.018 Score=46.10 Aligned_cols=46 Identities=9% Similarity=0.073 Sum_probs=40.4
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.+..|.++ +|||.++++++|++...|+. + +.+.+|++ ||...|+
T Consensus 41 i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~-l----~~~~l~~~-~ti~~la 87 (99)
T 2liu_A 41 IAEDQKFVDLGLDSIVGVEWTTTINQTYNLN-L----KATKLYDY-PTLLELS 87 (99)
T ss_dssp CCSSSCHHHHTCCHHHHHHHHHHHHHHHTCC-C----CHHHHHHC-CSHHHHH
T ss_pred cCCCCCHHHhCccHHHHHHHHHHHHHHHCCC-c----CHHHHHhC-CCHHHHH
Confidence 3456788899 99999999999999999987 6 88889999 8998887
No 87
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=91.46 E-value=0.014 Score=46.76 Aligned_cols=46 Identities=13% Similarity=0.152 Sum_probs=41.3
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.++.|.++ .|||+++++.++++...|+. + +...+|.+ ||...|+
T Consensus 34 i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~-l----~~~~l~~~-pTi~~la 80 (93)
T 4i4d_A 34 VGPHEDFAALGGNSIHAIXITNRVEELVDAE-L----SIRVLLET-RTVAGMT 80 (93)
T ss_dssp CCTTCCTTTTTCCHHHHHHHHHHHHHHHTSC-C----CHHHHHHH-CSHHHHH
T ss_pred CCCCCCHHHcCCcHHHHHHHHHHHHHHhCCC-C----CHHHHHcC-CCHHHHH
Confidence 4567788899 99999999999999999987 6 88889999 9999998
No 88
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=89.03 E-value=0.14 Score=41.08 Aligned_cols=46 Identities=9% Similarity=0.026 Sum_probs=40.1
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
...+..|.++ +|||..+|+..++...+|+. + |...+|++ +|+..++
T Consensus 28 i~~d~~~~dlG~DSL~~vel~~~le~~fgi~-i----~~~~l~~~-~Tv~~l~ 74 (95)
T 1nq4_A 28 DVEDVAFDALGYDSLALLNTVGRIERDYGVQ-L----GDDAVEKA-TTPRALI 74 (95)
T ss_dssp CCSSSCHHHHTCCSHHHHHHHHHHHHHTCCC-S----CTTHHHHC-CSHHHHH
T ss_pred CCCCCChhhhCCCHHHHHHHHHHHHHHHCCc-c----CHHHHHcC-CCHHHHH
Confidence 3456778899 99999999999999999998 7 77778888 8998888
No 89
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=88.92 E-value=0.033 Score=44.38 Aligned_cols=46 Identities=9% Similarity=0.053 Sum_probs=40.1
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.++.|.++ .|||+++++.++++...|+. + +...+|.+ ||...|+
T Consensus 32 i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~-l----~~~~l~~~-~Ti~~la 78 (91)
T 1dny_A 32 IGILDNFFQIGGHSLKAMAVAAQVHREYQVE-L----PLKVLFAQ-PTIKALA 78 (91)
T ss_dssp CCSSCCTTSSCCSSHHHHHHHHHHHHHCCCC-C----CHHHHHHS-CSHHHHH
T ss_pred CCCCCCHHHcCCCHHHHHHHHHHHHHHHCCC-C----CHHHHHcC-CCHHHHH
Confidence 4457778889 99999999999999999987 6 77788999 9999888
No 90
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=88.48 E-value=0.11 Score=47.97 Aligned_cols=46 Identities=13% Similarity=0.019 Sum_probs=40.4
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.+..|.++ +|||.++|+++|++...|+. + +.+.+|++ ||...|+
T Consensus 150 i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~-l----~~~~l~~~-~Ti~~La 196 (212)
T 2l22_A 150 LRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQ-L----AADAIYTW-PTLKSLA 196 (212)
T ss_dssp CCSSCCGGGGCSSSHHHHHHHHHHHHHTTCC-C----CGGGGGGC-CSHHHHH
T ss_pred CCCCCCHHHhCCCHHHHHHHHHHHHHHHCCC-c----CHHHHHcC-CCHHHHH
Confidence 3456677789 99999999999999999987 6 88889999 9999888
No 91
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=85.93 E-value=0.13 Score=39.71 Aligned_cols=44 Identities=9% Similarity=-0.073 Sum_probs=37.4
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..|.++ +|||..+|+..++....|+. + |...++.+ +|...++
T Consensus 29 ~~~~~~dlG~DSL~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 73 (83)
T 1or5_A 29 LDTPFVDLGYDSLALLETAAVLQQRYGIA-L----TDETVGRL-GTPRELL 73 (83)
T ss_dssp SSSCHHHHSCCHHHHHHHHHHHHTTSCCC-C----SHHHHHHC-CCSHHHH
T ss_pred CCCcHHHhCCCHHHHHHHHHHHHHHHCCc-c----CHHHHhcc-CCHHHHH
Confidence 35568999 99999999999999999988 6 76667777 8888777
No 92
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=83.96 E-value=0.16 Score=53.07 Aligned_cols=47 Identities=6% Similarity=0.034 Sum_probs=0.0
Q ss_pred CCCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHHH
Q 012130 74 FSGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNR 127 (470)
Q Consensus 74 ~~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la~ 127 (470)
..+.++.|.++ .|||+++++.++++. .|+. + +...+|.+ ||...|+.
T Consensus 62 ~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~-~----~~~~~~~~-~t~~~la~ 109 (508)
T 4f6l_B 62 DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHH-I----SMQTLYQY-KTVRQIVN 109 (508)
T ss_dssp -------------------------------------------------------
T ss_pred CCCCCCChHHcCchHHHHHHHHHHHHH-cCCC-c----cHHHHhcC-CcHHHHHH
Confidence 35678899999 999999999999986 6766 5 77889999 99999983
No 93
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=83.32 E-value=0.41 Score=36.50 Aligned_cols=44 Identities=7% Similarity=-0.127 Sum_probs=36.4
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+|+..++....|+. + |...++.+ +|...++
T Consensus 28 ~~~~l~~dlG~DSl~~~el~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 73 (81)
T 2lol_A 28 TDSRFIEDLKADSLDTVELMMAIEVEYGID-I----PDDEATKI-KTVSDVI 73 (81)
T ss_dssp TTCCHHHHTTCCHHHHHHHHHHHHHHHCCC-C----CGGGGGGS-SSHHHHH
T ss_pred CCCcHHHhcCCcHHHHHHHHHHHHHHHCCC-C----CHHHHHHc-CCHHHHH
Confidence 34555 799 99999999999999999988 6 66666777 8887777
No 94
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=82.29 E-value=0.16 Score=38.24 Aligned_cols=44 Identities=7% Similarity=-0.103 Sum_probs=37.0
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+++.+++....|+. + |...+|.+ +|...++
T Consensus 23 ~~~~l~~~lG~DSl~~~~l~~~le~~~gi~-i----~~~~~~~~-~tv~~l~ 68 (77)
T 2ehs_A 23 PEAKFVEDLGADSLDVVELIMAFEEEFGIE-I----PDEDAEKI-QTVGDVI 68 (77)
T ss_dssp TTCBTTTTTCCCHHHHHHHHHHHHHHHTCC-C----CHHHHHTC-CBHHHHH
T ss_pred CccchhhccCCCHHHHHHHHHHHHHHhCCc-c----CHHHHHHc-CCHHHHH
Confidence 45566 888 99999999999999999987 6 66667777 8888887
No 95
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=82.21 E-value=0.16 Score=38.61 Aligned_cols=44 Identities=9% Similarity=-0.093 Sum_probs=36.7
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+++..++....|+. + |...+|.+ +|...++
T Consensus 25 ~~~~l~~dlG~DSl~~~el~~~le~~fgi~-i----~~~~l~~~-~Tv~~l~ 70 (78)
T 1l0i_A 25 NNASFVEDLGADSLDTVELVMALEEEFDTE-I----PDEEAEKM-TTVQAAI 70 (78)
T ss_dssp TTCBTTTTSCCCHHHHHHHHHHHHHHHTCC-C----CHHHHTTC-CBHHHHH
T ss_pred CCcchhhhcCCCHHHHHHHHHHHHHHhCCC-C----CHHHHHHc-CCHHHHH
Confidence 35556 689 99999999999999999988 6 76667777 8888887
No 96
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=80.45 E-value=0.24 Score=37.99 Aligned_cols=44 Identities=7% Similarity=-0.101 Sum_probs=36.4
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..|.++ +|||..+++..++....|+. + |...++.+ +|...++
T Consensus 27 ~~~~l~dlG~DSl~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 71 (82)
T 2ava_A 27 ADSEFSKLGADSLDTVEIVMNLEEEFGIN-V----DEDKAQDI-STIQQAA 71 (82)
T ss_dssp SSCCSCCCTTCCSCHHHHHHHHHHHTTCC-C----CGGGSSSC-CSHHHHH
T ss_pred CCCchhhcCCCHHHHHHHHHHHHHHHCCc-c----CHHHHHhC-CCHHHHH
Confidence 35555688 99999999999999999988 6 66666777 8888887
No 97
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=80.29 E-value=0.36 Score=36.82 Aligned_cols=45 Identities=9% Similarity=-0.131 Sum_probs=36.5
Q ss_pred CCchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+..| .++ +|||..+|+..++....|+. + |...++.+ +|...++
T Consensus 28 ~~~~~l~~dlG~DSl~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 74 (81)
T 1f80_D 28 KLEASFKEDLGADXLDVVELVMELEDEFDME-I----SDEDAEKI-ATVGDAV 74 (81)
T ss_dssp CTTCBHHHHSCCCHHHHHHHHHHHHHHTTCC-C----CHHHHHHC-CBHHHHH
T ss_pred CCccchHHHcCCcHHHHHHHHHHHHHHhCCc-c----CHHHHHHC-CCHHHHH
Confidence 345666 899 99999999999999999988 6 66666667 7777776
No 98
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=79.71 E-value=0.3 Score=37.05 Aligned_cols=45 Identities=9% Similarity=-0.110 Sum_probs=36.3
Q ss_pred CCchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+..| .++ +|||..+++..++....|+. + |...++.+ +|...++
T Consensus 25 ~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 71 (79)
T 2l3v_A 25 TEGASFIDDLGADSLDTVELVMAFEEEFGVE-I----PDDAAETI-LTVGDAV 71 (79)
T ss_dssp CTTCCHHHHTCCCSSSSSSTTTTHHHHTTCC-C----CHHHHTTC-SSSSTTH
T ss_pred CCCCccccccCCCHHHHHHHHHHHHHHHCCC-C----CHHHHHHc-CCHHHHH
Confidence 345566 899 99999999999999999988 6 66666777 7777666
No 99
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=79.26 E-value=0.29 Score=37.96 Aligned_cols=44 Identities=9% Similarity=-0.078 Sum_probs=36.1
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..|.++ +|||..+|+..++....|+. + |...++.. +|...++
T Consensus 31 ~~~~l~dlG~DSL~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 75 (86)
T 1af8_A 31 LDLRFEDIGYDSLALMETAARLESRYGVS-I----PDDVAGRV-DTPRELL 75 (86)
T ss_dssp STTSTTTTTCCTTTHHHHHHHHTTTTCSC-C----CTTTTTTC-CSHHHHH
T ss_pred CCCChhhcCCCHHHHHHHHHHHHHHHCCC-c----CHHHHHcC-CCHHHHH
Confidence 35567889 99999999999999999998 6 55555666 8888777
No 100
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.54 E-value=0.37 Score=38.70 Aligned_cols=44 Identities=7% Similarity=-0.160 Sum_probs=36.6
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+|+..++....|+. + |...++.+ +|...|+
T Consensus 37 ~d~~l~~dlG~DSL~~vel~~~le~~fgi~-i----~~~~l~~~-~Tv~~l~ 82 (99)
T 2dnw_A 37 VNSHFMKDLGLDSLDQVEIIMAMEDEFGFE-I----PDIDAEKL-MCPQEIV 82 (99)
T ss_dssp TTCCCCCCCCCCHHHHHHHHHHHHHHTTCC-C----CHHHHTTC-CSHHHHH
T ss_pred CCCchhhhcCCCHHHHHHHHHHHHHHHCCC-C----CHHHHHhC-CCHHHHH
Confidence 34555 689 99999999999999999988 6 76667777 8888887
No 101
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=78.38 E-value=1 Score=37.11 Aligned_cols=44 Identities=11% Similarity=0.027 Sum_probs=36.8
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+++..++....|+. + |...++.+ +|...|+
T Consensus 29 ~d~~l~~dlG~DSL~~vel~~~lE~~fgi~-i----~~~~l~~~-~Tv~~l~ 74 (115)
T 1klp_A 29 PEKSFVDDLDIDSLSMVEIAVQTEDKYGVK-I----PDEDLAGL-RTVGDVV 74 (115)
T ss_dssp TTCCTTTTTCSHHHHHHHHHHHHHHHTCCC-C----CHHHHTTC-CSHHHHH
T ss_pred CCCchhhccCCCHHHHHHHHHHHHHHHCCC-C----CHHHHHcC-CCHHHHH
Confidence 35555 789 99999999999999999988 6 66666777 8988887
No 102
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.06 E-value=0.65 Score=38.48 Aligned_cols=47 Identities=9% Similarity=-0.055 Sum_probs=40.4
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhc-cccccCCCCceEeeCCCCChHHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVS-SLGFFGDNGFSSFFGSNNSTATLNR 127 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~g-l~~l~~~~~~t~~F~~~ptp~~la~ 127 (470)
.++++-|.++ -+||+++.+..+++...| +. + +...+|.+ ||...|+.
T Consensus 44 i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~-l----~l~~Lf~~-pTl~~lA~ 92 (110)
T 2cq8_A 44 VEDSTDFFKSGAASVDVVRLVEEVKELCDGLE-L----ENEDVYMA-STFGDFIQ 92 (110)
T ss_dssp CCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCC-C----CHHHHHHC-CBHHHHHH
T ss_pred CCCCCCHHhcCChHHHHHHHHHHHHHHcCCCC-c----CHHHHHhC-CCHHHHHH
Confidence 4668888899 999999999999999888 66 5 66678999 99999983
No 103
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=77.53 E-value=0.26 Score=37.41 Aligned_cols=45 Identities=7% Similarity=-0.174 Sum_probs=36.9
Q ss_pred CCchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+..| .++ +|||..+++..++....|+. + |...+|.+ +|...++
T Consensus 26 ~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 72 (80)
T 1x3o_A 26 TLEARFIEDLGADSLDTVELIMGLEDEFGLE-I----SDEEAEKI-RTVKDAV 72 (80)
T ss_dssp CTTCBTTTTTCCCHHHHHHHHHHHHHHHCCC-C----CHHHHHHC-CBHHHHH
T ss_pred CCcCcHHhhcCccHHHHHHHHHHHHHHHCCC-c----CHHHHHHc-CCHHHHH
Confidence 345566 888 99999999999999999988 6 66666777 7887777
No 104
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=78.02 E-value=0.53 Score=38.34 Aligned_cols=45 Identities=9% Similarity=-0.100 Sum_probs=35.6
Q ss_pred CCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+..|.++ +|||..||+..++....|+. + |...++.. +|...|+
T Consensus 47 ~~d~~l~dLGlDSL~~veL~~~lE~~fgi~-i----~~~~l~~~-~TV~~l~ 92 (103)
T 2lte_A 47 SRDSRMEDLAFDSLVVSELSLKLRKEFGVT-G----VDDELDLL-ETVDELF 92 (103)
Confidence 446677999 99999999999999999998 6 55555666 6665555
No 105
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=75.71 E-value=0.61 Score=35.52 Aligned_cols=44 Identities=9% Similarity=-0.069 Sum_probs=35.7
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+++..++....|+. + |...++.+ +|...++
T Consensus 29 ~~~~l~~dlG~DSl~~~~l~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 74 (82)
T 2cnr_A 29 LDKSFTDDLDVDSLSMVEVVVAAEERFDVK-I----PDDDVKNL-KTVGDAT 74 (82)
T ss_dssp TTSBTTTTSCCCHHHHHHHHHHHHGGGTBC-C----CGGGGGTC-SBHHHHH
T ss_pred CCcchhhccCCChHHHHHHHHHHHHHhCCC-C----CHHHHHHc-CCHHHHH
Confidence 34445 688 99999999999999999988 6 66666777 8887777
No 106
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=75.62 E-value=0.31 Score=47.56 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=41.1
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.++.|.++ .|||+++++.++++...|+. + +...+|.+ ||+..|+
T Consensus 29 i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~-~----~~~~~~~~-~t~~~la 75 (329)
T 3tej_A 29 QDADADFFALGGHXLLAMKLAAQLSRQVARQ-V----TPGQVMVA-STVAKLA 75 (329)
T ss_dssp CSTTCBTTTTTCCHHHHHHHHHHHHHHHTSC-C----CHHHHHHC-CBHHHHH
T ss_pred CCCCCCHHHcCCcHHHHHHHHHHHHHHHCCC-C----CHHHHHhC-CCHHHHH
Confidence 4567888899 99999999999999999987 6 77889999 9999998
No 107
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=74.96 E-value=0.67 Score=35.52 Aligned_cols=44 Identities=7% Similarity=-0.090 Sum_probs=35.4
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+|+..++....|+. + |...++.+ +|...++
T Consensus 29 ~d~~l~~dlG~DSl~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 74 (82)
T 2qnw_A 29 PESNFIKDLDADSLDSVELVMAFEEKFGVS-I----PDEEASKI-ATVQDAL 74 (82)
T ss_dssp TTCBHHHHSCCCHHHHHHHHHHHHHHHTCC-C----CHHHHTTC-CBHHHHH
T ss_pred CccchhhccCCcHHHHHHHHHHHHHHHCCc-C----CHHHHHHc-CCHHHHH
Confidence 34455 899 99999999999999999988 6 66555666 7877776
No 108
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=73.86 E-value=0.88 Score=34.95 Aligned_cols=45 Identities=7% Similarity=-0.077 Sum_probs=35.8
Q ss_pred CCchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+..| .++ +|||..+|+..++....|+. + |...++.. +|...++
T Consensus 30 ~~~~~l~~dlG~DSl~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 76 (84)
T 2kwl_A 30 TTDSRFVEDLNADSLDIYELLYLLEEAFDDK-I----PENEANEF-ETVGDVV 76 (84)
T ss_dssp CTTTHHHHTSSSCHHHHHHHHHHHHHHHTCC-T----TTTGGGGC-SSHHHHH
T ss_pred CCCCchhhhcCCCHHHHHHHHHHHHHHHCCC-c----CHHHHHHC-CCHHHHH
Confidence 345666 889 99999999999999999998 5 55455666 7777776
No 109
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=70.56 E-value=0.73 Score=37.31 Aligned_cols=44 Identities=7% Similarity=-0.040 Sum_probs=35.8
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..|.++ +|||..||++.|+...+|+. + |...++.. +|...|+
T Consensus 39 ~d~~L~dLGlDSL~~veL~~~LE~~fgi~-i----~~~~l~~~-~TV~~L~ 83 (100)
T 1vku_A 39 EENTFKELGFDSIDVIDLVMFFEDEFALR-I----EDEEISKI-RKVKDLI 83 (100)
T ss_dssp TTSBTTTTTCCHHHHHHHHHHHHHHHTCC-C----CHHHHTTC-CBHHHHH
T ss_pred CCCCHHHcCCchHHHHHHHHHHHHHHCCC-C----CHHHHHcC-CCHHHHH
Confidence 45566888 99999999999999999998 6 66555556 7887777
No 110
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=69.79 E-value=1.1 Score=34.13 Aligned_cols=45 Identities=9% Similarity=-0.075 Sum_probs=36.8
Q ss_pred CCchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+..| .++ +|||..+|+...+....|+. + |...++.+ +|...++
T Consensus 26 ~~d~~l~~dlg~DSl~~vel~~~le~~fgi~-i----~~~~~~~~-~Tv~~l~ 72 (81)
T 3gzm_A 26 QMNSNFTKDLGADSLDLVELIMALEEKFNVT-I----SDQDALKI-NTVQDAI 72 (81)
T ss_dssp CTTCBHHHHSCCCHHHHHHHHHHHHHHHTCC-C----CHHHHHTC-CBHHHHH
T ss_pred CCCCcchhhcCCCHHHHHHHHHHHHHHHCCC-c----CHHHHHHc-CCHHHHH
Confidence 345556 799 99999999999999999998 6 66666777 8888777
No 111
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=66.55 E-value=0.93 Score=43.69 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=9.2
Q ss_pred HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 85 MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 85 ~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.|||++++++++++..+|+. + +...+|++ ||...|+
T Consensus 2 GdSL~a~~l~~rl~~~~g~~-l----~~~~lf~~-pt~~~l~ 37 (316)
T 2px6_A 2 SHNLACPTPKEDGLAQQQTQ-L----NLRSLLVN-PEGPTLM 37 (316)
T ss_dssp -----------------------------CCCCC-TTSCSEE
T ss_pred CchHHHHHHHHHHHHHHhhc-c----chhhhhcC-CCcCeeE
Confidence 38999999999999999988 7 88889999 8875554
No 112
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=57.30 E-value=1.5 Score=34.09 Aligned_cols=43 Identities=5% Similarity=-0.082 Sum_probs=34.0
Q ss_pred chHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 78 ~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
+..| .++ +|||..+|+..++....|+. + +...++.. +|...+.
T Consensus 34 d~~l~~dlglDSl~~vel~~~lE~~fgi~-i----~~~~~~~~-~Tv~~l~ 78 (88)
T 2l4b_A 34 TTNLAKDFNLDSLDFVDLIMSLEERFSLE-I----SDEDAQKL-ETVDDIC 78 (88)
T ss_dssp TSCTTTTTTCCHHHHHHHHHHHHHHTTCC-C----CHHHHHTC-CSHHHHH
T ss_pred CCchhhccCCcHHHHHHHHHHHHHHHCCC-c----CHHHHHHc-CCHHHHH
Confidence 4445 788 99999999999999999998 6 55555556 7777776
No 113
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=55.64 E-value=2.4 Score=52.86 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.+..|.++ +|||++||++||+....|+. + +...+|. ++...|+
T Consensus 2144 i~~~~~~~~lG~DSL~avelr~~i~~~~~~~-l----~~~~i~~--~t~~~la 2189 (2512)
T 2vz8_A 2144 INPDSTLVDLGLDSLMGVEVRQILEREHDLV-L----SMREVRQ--LSLRKLQ 2189 (2512)
T ss_dssp -----------------------------------------------------
T ss_pred cCCCCchHHhCcchHHHHHHHHHHHHHhCCc-c----cHHHHHh--hhHHHHH
Confidence 4567889999 99999999999999999986 6 6555665 5666666
No 114
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=54.87 E-value=1.8 Score=33.93 Aligned_cols=44 Identities=9% Similarity=-0.035 Sum_probs=36.9
Q ss_pred CchHHHH-H-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSIQS-L-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~-l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..|.+ + +|||..+|+..++....|+. + |..-+|+. +|...|+
T Consensus 24 ~~~~~~d~lg~DSL~~veli~~ie~~fgi~-i----~~~~l~~~-~TV~dl~ 69 (87)
T 2kjs_A 24 RETSANDIDAWDSLSHMNLIVSLEVHYKIK-F----ALGELQKL-KNVGDLA 69 (87)
T ss_dssp TTCCSTTCSCCCHHHHHHHHHHHHHHHTCC-C----CHHHHTTC-CSHHHHH
T ss_pred CCCCcccCCCCChHHHHHHHHHHHHHhCce-e----cHHHHHcC-CCHHHHH
Confidence 3455655 5 99999999999999999998 7 77788888 8888877
No 115
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=54.62 E-value=2.6 Score=45.05 Aligned_cols=46 Identities=9% Similarity=0.093 Sum_probs=0.0
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhh-hhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYS-SVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~-~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.++.|.++ .|||+++++.++++. ..|+. + +...+|.+ ||...|+
T Consensus 542 ~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~-l----~~~~~f~~-pti~~la 589 (620)
T 4dg8_A 542 GAADQDFFLCGGNSLLALQLVALCQSAGAGAN-L----GLADLQAN-SRLDQFS 589 (620)
T ss_dssp ------------------------------------------------------
T ss_pred CCCCCChhhccCcHHHHHHHHHHHHhhCCCCC-c----CHHHHhcC-CCHHHHH
Confidence 4668889999 999999999999998 67776 5 77789999 9999888
No 116
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=51.77 E-value=4 Score=32.88 Aligned_cols=44 Identities=14% Similarity=-0.090 Sum_probs=34.7
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+|+...+....|+. + |...++.. +|...+.
T Consensus 48 ~d~~l~~dLGlDSL~~veLi~~lE~~fgi~-i----~~~~l~~~-~Tv~dl~ 93 (101)
T 4dxe_H 48 EDASFKDDLGADSLDIAELVMELEDEFGTE-I----PDEEAEKI-NTVGDAV 93 (101)
T ss_dssp TTCBTTTTSCCCHHHHHHHHHHHHHHTTCC-C----CHHHHTTC-CBHHHHH
T ss_pred CCCcchhhcCCCcHHHHHHHHHHHHHHCCC-C----CHHHHHcC-CCHHHHH
Confidence 35556 889 99999999999999999998 6 55555555 6776666
No 117
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=48.30 E-value=2.4 Score=33.82 Aligned_cols=44 Identities=9% Similarity=-0.096 Sum_probs=34.7
Q ss_pred CchHH-HHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f-~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+..| .++ +|||..+|+...+....|+. + +...++.. +|...|.
T Consensus 44 ~d~~l~~dLGlDSL~~vel~~~lE~~fgi~-i----~~~~l~~~-~Tv~~l~ 89 (97)
T 3ejb_A 44 NNASFVEDLGADSLDTVELVMALEEEFDTE-I----PDEEAEKI-TTVQAAI 89 (97)
T ss_dssp TTCBTTTTTCCCTTHHHHHHHHHHHHTTCC-C----CHHHHHHC-CBHHHHH
T ss_pred CCCCchhhcCCCHHHHHHHHHHHHHHHCCC-C----CHHHHHhC-CCHHHHH
Confidence 34555 799 99999999999999999998 6 55555666 6776666
No 118
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=48.04 E-value=2.8 Score=48.90 Aligned_cols=46 Identities=9% Similarity=0.082 Sum_probs=41.6
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.++.|.++ .|||+++++.++++...|+. + +...+|.+ ||...|+
T Consensus 990 i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~-l----~~~~~~~~-~ti~~la 1036 (1304)
T 2vsq_A 990 IGIHDDFFALGGHALKAMTAASRIKKELGID-L----PVKLLFEA-PTIAGIS 1036 (1304)
T ss_dssp CCTTCCTTTTTCCHHHHHHHHHHSSSTTSCC-C----CSSCTTTC-CSHHHHH
T ss_pred cCCCCCHHHhCCChHHHHHHHHHHHHHhCCC-C----CHHHHHhC-CCHHHHH
Confidence 5667888999 99999999999999999987 6 77889999 9999998
No 119
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=43.91 E-value=4.9 Score=31.41 Aligned_cols=44 Identities=9% Similarity=-0.021 Sum_probs=16.3
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccccccCCCC---ceEeeCCCCChHHHH
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNG---FSSFFGSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~---~t~~F~~~ptp~~la 126 (470)
.+..|.++ +|||..+++...+....|+. + | ...++.. +|...+.
T Consensus 34 ~d~~l~dlg~DSl~~vel~~~lE~~fgi~-i----~~~~~~~~~~~-~Tv~~l~ 81 (92)
T 1fh1_A 34 TDTELTSLGIDSLGLADVLWDLEQLYGIK-I----EMNTADAWSNL-NNIGDVV 81 (92)
T ss_dssp ------------CTTTTHHHHHHHC-----------------------CTTTST
T ss_pred CCCCHhhcCCChHHHHHHHHHHHHHhCCc-c----CCccHhHHhhc-CCHHHHH
Confidence 45677889 99999999999999999998 5 4 3444455 5665555
No 120
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=43.04 E-value=3 Score=43.02 Aligned_cols=46 Identities=11% Similarity=0.054 Sum_probs=40.8
Q ss_pred CCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 75 SGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 75 ~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
.+.++.|.++ .|||+++++..++....|+. + +...+|.+ ||...|+
T Consensus 28 i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~-l----~~~~i~~~-~ti~~la 74 (520)
T 2jgp_A 28 VGALDDFFALGGHSLRAMRVLSSMHNEYQVD-I----PLRILFEK-PTIQELA 74 (520)
T ss_dssp CCTTCBTTTTTCCHHHHHHHHHHHHHHHCBC-C----CHHHHHHS-CBHHHHH
T ss_pred CCCCccHHHhcccHHHHHHHHHHHHHHhCCC-c----CHHHHhcC-CCHHHHH
Confidence 4567888899 99999999999999999987 6 77788999 9999998
No 121
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=42.32 E-value=3.4 Score=43.91 Aligned_cols=46 Identities=4% Similarity=-0.042 Sum_probs=38.6
Q ss_pred CCCCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 74 FSGSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 74 ~~~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
..+.++.|.++ .|||+++++.++++.. +.. + +...+|.+ ||...|+
T Consensus 563 ~~~~~d~Ff~lGgdSl~a~~l~~~l~~~-~~~-~----~~~~~~~~-pti~~la 609 (617)
T 3rg2_A 563 EPFDDDNLIDYGLDSVRMMALAARWRKV-HGD-I----DFVMLAKN-PTIDAWW 609 (617)
T ss_dssp CCCTTSCGGGGTCCHHHHHHHHHHHHTT-STT-C----CHHHHHHS-CCHHHHH
T ss_pred CCCCCCChhhcCccHHHHHHHHHHHHHh-cCC-C----CHHHHhcC-CCHHHHH
Confidence 45567889999 9999999999999874 543 4 77889999 9999998
No 122
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=36.09 E-value=4.5 Score=32.72 Aligned_cols=44 Identities=7% Similarity=-0.028 Sum_probs=33.9
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEee--CCCCChHHHH
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFF--GSNNSTATLN 126 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F--~~~ptp~~la 126 (470)
.+..|.++ +|||..||+..++....|+. + |...++ .+ +|...++
T Consensus 46 ~d~~l~dlGlDSL~~veLv~~lE~~fgI~-i----~~~~l~~~~~-~tv~~l~ 92 (105)
T 2jq4_A 46 DEADLYAAGLSSFASVQLMLGIEEAFDIE-F----PDNLLNRKSF-ASIKAIE 92 (105)
T ss_dssp TTSCGGGGTCCHHHHHHHHHHHHHHHSCC-C----CHHHHSSGGG-GCHHHHH
T ss_pred CCCCHhhcCCCHHHHHHHHHHHHHHHCCC-c----CHHHhhhhhc-CCHHHHH
Confidence 34555589 99999999999999999988 6 665555 24 6777776
No 123
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=31.51 E-value=1.5e+02 Score=29.07 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=30.1
Q ss_pred ecCCCchHHHHH-HHHHHHHHcCCCCEEEEeeecCCcchhhh
Q 012130 323 ISTACATSNFCI-LNAANHIIRGEANVMLCGGSDAAVIPIGL 363 (470)
Q Consensus 323 V~tACsSsl~AI-~~A~~~Lr~G~~d~aLvGGvd~~l~p~~~ 363 (470)
=.++|+.|.+.+ .+=.+.|++|+.+.+|+.++...++|..+
T Consensus 275 ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~~~~ 316 (347)
T 3lma_A 275 GGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSPTII 316 (347)
T ss_dssp ---CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCHHHH
T ss_pred CCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCcchh
Confidence 345666665554 33456799999999999999999999876
No 124
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=29.89 E-value=2.4 Score=34.00 Aligned_cols=26 Identities=12% Similarity=0.020 Sum_probs=23.5
Q ss_pred HHHHH-HHhhchhhhhhhhhhhhccccc
Q 012130 80 SIQSL-MASCLPFEPCNEYYSSVSSLGF 106 (470)
Q Consensus 80 ~f~~l-~dSl~avel~n~l~~~~gl~~l 106 (470)
++.++ +|||..||+...+....|+. +
T Consensus 29 l~~dLGlDSL~~veLi~~lE~~fgi~-i 55 (101)
T 2kw2_A 29 AIDDLGIDSLDFLDIAFAIDKAFGIK-L 55 (101)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHTTCC-C
T ss_pred hHHhcCCCHHHHHHHHHHHHHHHCCc-c
Confidence 44788 99999999999999999998 5
No 125
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=29.08 E-value=7.7 Score=37.14 Aligned_cols=44 Identities=5% Similarity=-0.018 Sum_probs=37.5
Q ss_pred CCchHHHHH-HHhhchhhhhhhhhhhhccccccCCCCceEeeCCCCChHHHH
Q 012130 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (470)
Q Consensus 76 ~~~~~f~~l-~dSl~avel~n~l~~~~gl~~l~~~~~~t~~F~~~ptp~~la 126 (470)
+.+..|.++ +||+.+++|.++++.. |+. + ..+.+|++ ||-..++
T Consensus 235 ~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~-~----~~~~l~~~-ptl~~~~ 279 (287)
T 2fq1_A 235 FDDDNLIDYGLDSVRMMALAARWRKV-HGD-I----DFVMLAKN-PTIDAWW 279 (287)
T ss_dssp CTTSCSGGGTCCTTHHHHHHHHHTTT-CTT-C----CHHHHHTS-CSHHHHH
T ss_pred CCCCCHHHhCccHHHHHHHHHHHHHc-CCC-C----CHHHHHhC-ccHHHHH
Confidence 446667778 9999999999999998 987 6 77889999 9988777
No 126
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=22.17 E-value=12 Score=30.43 Aligned_cols=28 Identities=21% Similarity=0.097 Sum_probs=25.5
Q ss_pred CchHHHHH-HHhhchhhhhhhhhhhhccc
Q 012130 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSL 104 (470)
Q Consensus 77 ~~~~f~~l-~dSl~avel~n~l~~~~gl~ 104 (470)
.-+++.+| +|||..||+...++..+|+.
T Consensus 37 da~l~dDLglDSLd~VeLVm~lE~~fGi~ 65 (102)
T 2l9f_A 37 DSRFLDDLHMSSITVGQLVNEAARAMGLS 65 (102)
T ss_dssp TCBTTTTSCCCHHHHHHHHHHHHHHHTCS
T ss_pred CcchhhhcCCcHHHHHHHHHHHHHHhCCC
Confidence 35678899 99999999999999999988
Done!